Miyakogusa Predicted Gene
- Lj6g3v1640140.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1640140.1 Non Chatacterized Hit- tr|F6HRT7|F6HRT7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,28.62,0.000000000007,OS09G0311600 PROTEIN,NULL; LEUCINE-RICH
REPEAT-CONTAINING PROTEIN,NULL; LRR_7,NULL;
LRR_1,Leucine-ri,CUFF.59728.1
(342 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G14470.1 | Symbols: | NB-ARC domain-containing disease resis... 115 5e-26
AT3G14460.1 | Symbols: | LRR and NB-ARC domains-containing dise... 114 1e-25
AT1G69550.1 | Symbols: | disease resistance protein (TIR-NBS-LR... 53 3e-07
>AT3G14470.1 | Symbols: | NB-ARC domain-containing disease resistance
protein | chr3:4857940-4861104 FORWARD LENGTH=1054
Length = 1054
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 130/262 (49%), Gaps = 26/262 (9%)
Query: 2 DILDKLQPHQDLKHISISGYRGTKFPEWVGHSSYHNMTELYLWDCMNCCMLPSLGQLPSL 61
++ +KL+PH+ ++ ++I Y+G +FP+W+ S+ + + L +C C LPSLGQLP L
Sbjct: 756 EVFEKLRPHRHIEKLAIERYKGRRFPDWLSDPSFSRIVCIRLRECQYCTSLPSLGQLPCL 815
Query: 62 KTLYIIRLNGVEFLKSDDSFS--------GTPFPSLHNLTFIDMPSWEVW---RPFESNA 110
K L+I + G++ + FS PF SL L F ++P W+ W R +
Sbjct: 816 KELHISGMVGLQSIGRKFYFSDQQLRDQDQQPFRSLETLRFDNLPDWQEWLDVRVTRGDL 875
Query: 111 FPQLQYLRIDNCPRLRGDLPNNLPALESLEISRCEQLASSLPRAPAIRRLEIRESNKVSL 170
FP L+ L I CP L G LP LP+L SL I +C L P R +S+
Sbjct: 876 FPSLKKLFILRCPELTGTLPTFLPSLISLHIYKC----GLLDFQPDHHEYSYRNLQTLSI 931
Query: 171 REMPISVEDLYIKGSEVVDSMLETTAITQPTSLRSLSLGNCSAVRSFPGDCLPASLKNLR 230
+ S D +K + L+ + Q TSL SL L N +R P +L+NLR
Sbjct: 932 K----SSCDTLVKFPLNHFANLDKLEVDQCTSLYSLELSN-EHLRG------PNALRNLR 980
Query: 231 IKDFRKLEFPKQQHELLQSLYI 252
I D + L+ + + L Q+L +
Sbjct: 981 INDCQNLQLLPKLNALPQNLQV 1002
>AT3G14460.1 | Symbols: | LRR and NB-ARC domains-containing disease
resistance protein | chr3:4851990-4856264 REVERSE
LENGTH=1424
Length = 1424
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 2 DILDKLQPHQDLKHISISGYRGTKFPEWVGHSSYHNMTELYLWDCMNCCMLPSLGQLPSL 61
++L L+PH LK I Y+G FP+W+G SS+ +T + L C C LP +GQLPSL
Sbjct: 750 EVLRMLEPHPHLKTFCIESYQGGAFPKWLGDSSFFGITSVTLSSCNLCISLPPVGQLPSL 809
Query: 62 KTLYIIRLN-----GVEFLKSDDSFSGTPFPSLHNLTFIDMPSWEVWR--PFESNAFPQL 114
K L I + N G++F +++ G PF SL L F MP W+ W E FP L
Sbjct: 810 KYLSIEKFNILQKVGLDFFFGENNSRGVPFQSLQILKFYGMPRWDEWICPELEDGIFPCL 869
Query: 115 QYLRIDNCPRLRGDLPNNLPALESLEISRC 144
Q L I CP LR P LP+ + IS C
Sbjct: 870 QKLIIQRCPSLRKKFPEGLPSSTEVTISDC 899
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 101/182 (55%), Gaps = 14/182 (7%)
Query: 170 LREMPISVEDLYIKGSEVVDSMLETTAITQPTSLRSLSLGNCSAVRSFPGDCLPASLKNL 229
L E+P +++ L+I + + S+ E + P +L L + C ++ SFPG P +LK L
Sbjct: 1086 LMELPQNLQSLHIDSCDGLTSLPENLTESYP-NLHELLIIACHSLESFPGSHPPTTLKTL 1144
Query: 230 RIKDFRKLEF-----PKQQHELLQSLYINSSCDSLTSLLLESFPNLHSLTIRNLENLESI 284
I+D +KL F P + + L+ L+I SSC +L + L FP L SL+IR+ E+ ++
Sbjct: 1145 YIRDCKKLNFTESLQPTRSYSQLEYLFIGSSCSNLVNFPLSLFPKLRSLSIRDCESFKTF 1204
Query: 285 SVQ---GD--AALTDFVIDGCPKFVSFPNEGLSAPAMTKFSVSDCNKLKSLP---YHMST 336
S+ GD AL I CP +FP GL P ++ +S+C KL++LP + +++
Sbjct: 1205 SIHAGLGDDRIALESLEIRDCPNLETFPQGGLPTPKLSSMLLSNCKKLQALPEKLFGLTS 1264
Query: 337 LL 338
LL
Sbjct: 1265 LL 1266
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 151/351 (43%), Gaps = 61/351 (17%)
Query: 2 DILDKLQPHQDLKHISISGYRG-TKFPEWVGHSSYHNMTELYLWDCMNCCMLPSLGQLPS 60
DI ++ Q+L+ + I G T PE + S Y N+ EL + C + P +
Sbjct: 1082 DISHLMELPQNLQSLHIDSCDGLTSLPENLTES-YPNLHELLIIACHSLESFPGSHPPTT 1140
Query: 61 LKTLYI---IRLNGVEFLKSDDSFSGTPFPSLHNLTFIDMPSWEVWRPFESNAFPQLQYL 117
LKTLYI +LN E L+ S+S + FI + F + FP+L+ L
Sbjct: 1141 LKTLYIRDCKKLNFTESLQPTRSYSQLEY------LFIGSSCSNLVN-FPLSLFPKLRSL 1193
Query: 118 RIDNCPRLR-----GDLPNNLPALESLEISRCEQLASSLPRA--PAIRRLEIRESNKVSL 170
I +C + L ++ ALESLEI C L + P+ P + + SN L
Sbjct: 1194 SIRDCESFKTFSIHAGLGDDRIALESLEIRDCPNL-ETFPQGGLPTPKLSSMLLSNCKKL 1252
Query: 171 REMPISVEDLYIKGSEVVDSMLETTAITQPTSLRSLSLGNCSAVRSFPGDCLPASLKNLR 230
+ +P + L TSL SL + C + + PG P++L+ L
Sbjct: 1253 QALPEKLFGL--------------------TSLLSLFIIKCPEIETIPGGGFPSNLRTLC 1292
Query: 231 I----KDFRKLEFPKQQHELLQSLYINSSCDSLTSLLLESFP-------NLHSLTIRNLE 279
I K ++E+ + E L++L I+ + +ESFP ++ SL I E
Sbjct: 1293 ISLCDKLTPRIEWGLRDLENLRNLEIDGGNED-----IESFPEEGLLPKSVFSLRISRFE 1347
Query: 280 NLESISVQG---DAALTDFVIDGCPKFVSFPNEGLSAPAMTKFSVSDCNKL 327
NL++++ +G A+ I GC K +E L P ++ +S C+ L
Sbjct: 1348 NLKTLNRKGFHDTKAIETMEISGCDKLQISIDEDL--PPLSCLRISSCSLL 1396
>AT1G69550.1 | Symbols: | disease resistance protein (TIR-NBS-LRR
class) | chr1:26148836-26153374 REVERSE LENGTH=1400
Length = 1400
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 147/341 (43%), Gaps = 45/341 (13%)
Query: 37 NMTELYLWDCMNCCMLPS-LGQLPSLKTLYIIRLN---------GVEFLKSDDSFSG--- 83
N+ Y C + LPS +G L SLK LY+ R++ G + SG
Sbjct: 813 NLEAFYFHGCSSLLELPSSIGNLISLKILYLKRISSLVEIPSSIGNLINLKLLNLSGCSS 872
Query: 84 -----TPFPSLHNLTFIDMPSWE--VWRPFESNAFPQLQYLRIDNCPRLRGDLP---NNL 133
+ +L NL +D+ V P LQ L + C L +LP NL
Sbjct: 873 LVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLV-ELPSSIGNL 931
Query: 134 PALESLEISRCEQLA---SSLPRAPAIRRLEIRESNKVSLREMPISVEDLY-IKGSEV-- 187
L++L +S C L SS+ ++ L + E + SL E+P S+ +L +K ++
Sbjct: 932 INLKTLNLSECSSLVELPSSIGNLINLQELYLSECS--SLVELPSSIGNLINLKKLDLSG 989
Query: 188 VDSMLET-TAITQPTSLRSLSLGNCSAVRSFP---GDCLPASLKNLRIKDFRKL-EFPKQ 242
S++E +I +L++L+L CS++ P G+ + +L+ L + + L E P
Sbjct: 990 CSSLVELPLSIGNLINLKTLNLSECSSLVELPSSIGNLI--NLQELYLSECSSLVELPSS 1047
Query: 243 QHELLQSLYIN-SSCDSLTSLLLESFPNLHSLTIRNLENLESI----SVQGDAALTDFVI 297
L+ ++ S C SL L L S NL +L NL S+ S G+ L +
Sbjct: 1048 IGNLINLKKLDLSGCSSLVELPL-SIGNLINLKTLNLSGCSSLVELPSSIGNLNLKKLDL 1106
Query: 298 DGCPKFVSFPNEGLSAPAMTKFSVSDCNKLKSLPYHMSTLL 338
GC V P+ + + K +S C+ L LP + L+
Sbjct: 1107 SGCSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLI 1147
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 151/340 (44%), Gaps = 32/340 (9%)
Query: 12 DLKHISISGYRG-TKFPEWVGHSSYHNMTELYLWDCMNCCMLPS-LGQLPSLKTLYIIRL 69
+LK + +SG + P +G+ N+ ELYL +C + LPS +G L +LKTL +
Sbjct: 885 NLKKLDLSGCSSLVELPLSIGN--LINLQELYLSECSSLVELPSSIGNLINLKTLNLSEC 942
Query: 70 NGVEFLKSDDSFSGTPFPSLHNLT--FIDMPSWEVWRPFESNAFPQLQYLRIDNCPRLRG 127
+ + L S +L NL ++ S V P L+ L + C L
Sbjct: 943 SSLVELPSS-------IGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLV- 994
Query: 128 DLP---NNLPALESLEISRCEQLA---SSLPRAPAIRRLEIRESNKVSLREMPISVEDLY 181
+LP NL L++L +S C L SS+ ++ L + E + SL E+P S+ +L
Sbjct: 995 ELPLSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECS--SLVELPSSIGNLI 1052
Query: 182 -IKGSEV--VDSMLET-TAITQPTSLRSLSLGNCSAVRSFPGDCLPASLKNLRIKDFRKL 237
+K ++ S++E +I +L++L+L CS++ P +LK L + L
Sbjct: 1053 NLKKLDLSGCSSLVELPLSIGNLINLKTLNLSGCSSLVELPSSIGNLNLKKLDLSGCSSL 1112
Query: 238 -EFPKQQHELLQSLYIN-SSCDSLTSLLLE--SFPNLHSLTIRNLENLESI--SVQGDAA 291
E P L+ ++ S C SL L L + NL L + +L + S+
Sbjct: 1113 VELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLIN 1172
Query: 292 LTDFVIDGCPKFVSFPNEGLSAPAMTKFSVSDCNKLKSLP 331
L + + C V P+ + + K ++ C KL SLP
Sbjct: 1173 LQELYLSECSSLVELPSSIGNLINLKKLDLNKCTKLVSLP 1212