Miyakogusa Predicted Gene

Lj6g3v1629960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1629960.1 tr|D2KTV9|D2KTV9_LOTJA MtN19 protein OS=Lotus
japonicus GN=MtN19 PE=2 SV=1,99.51,0,SURNod19,Stress up-regulated Nod
19,CUFF.59761.1
         (405 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G61820.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   432   e-121

>AT5G61820.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED
           DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
           Stress up-regulated Nod 19 (InterPro:IPR011692); Has
           30201 Blast hits to 17322 proteins in 780 species:
           Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
           3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
           2996 (source: NCBI BLink). | chr5:24834505-24836223
           REVERSE LENGTH=475
          Length = 475

 Score =  432 bits (1112), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 218/416 (52%), Positives = 279/416 (67%), Gaps = 29/416 (6%)

Query: 11  RGWVLSWALLLLVYS-SAAFGKTKNNEKSAVFLSPMFELGPGSVANKLFYDVEFPRGHIA 69
           R  +L   LL L  S S  F  T+   KSAVF SP   + PGSVAN   +D++FPRGHI 
Sbjct: 8   RSMILCLVLLSLSISPSQGFLGTEEKIKSAVFYSPKLVMNPGSVANPYLFDIDFPRGHIG 67

Query: 70  LKSFNAEVVDEAGNSVSLQETYLHHWIVIRYHHLK----------------------NVT 107
           LK+F+AEVVDEAG  V L ETYLHHWIV  Y+  K                      N+ 
Sbjct: 68  LKAFDAEVVDEAGKPVPLHETYLHHWIVEPYYVRKGSKLPQREMFRNHGFSREDPESNLD 127

Query: 108 DPSDIDVVSNSGLCQEGTLNYYFGVGSETRGTASHIPDPFGIEVGNPKEIPKGYEEKWLI 167
             SDI +V N GLC+  TL ++FG+GSETR T++++PDP+ IE+GNP+E P GYE KWL+
Sbjct: 128 SKSDIILVKNGGLCRSLTLRHFFGLGSETRETSTYVPDPYAIEIGNPEETPDGYEFKWLL 187

Query: 168 NSHAIDTRGVAERLGCAECRCDLYNITTDGDGKPLGPDYGGGLQCCPDKAQCKLRKGFLG 227
           N HAIDTRGV ++ GC EC CDLYN+T D  G+ + P Y GGL CC DK QC+++ GF  
Sbjct: 188 NIHAIDTRGVEDKKGCIECLCDLYNVTIDEYGRAIRPGYKGGLYCCYDKTQCRVKSGFDN 247

Query: 228 --PKRKLYLKYTVKWVEWDNFVVPVKVYVLDVTDTLNKSKGMSPQHNCKIEYDVKPWSKG 285
               R LYLKYTV+WV+WD+ V+P KVY+ DVTD+  +SKG S +H C +EY+VKP    
Sbjct: 248 GEKTRTLYLKYTVRWVDWDSSVLPAKVYIFDVTDSWERSKGDSQEHICHVEYEVKPCK-- 305

Query: 286 HANGSGYLDVKRASLPIPTGGYVIYGAGHLHIGGTGSTLYGQDGRVICSSLPRYGTGKKV 345
             NG G +DVK+ SL +P  GY++YG  H H GG G  LY ++G  IC+S+P+YG G + 
Sbjct: 306 -TNGDGCVDVKKKSLVMPFDGYIVYGVAHQHAGGIGGALYRENGEGICASMPKYGNGDEP 364

Query: 346 GNEKGYLVAMSTCYPRPGSEKIKNGETLSLEITYNNSIGHTGVMGLFYILVAEKLP 401
           GNE GY+V MS+CYP     K+  GETL+LE  Y+N++GHTGVMGLFYILVA++LP
Sbjct: 365 GNEAGYIVGMSSCYP-ADPVKVSYGETLTLESNYSNAVGHTGVMGLFYILVAQQLP 419