Miyakogusa Predicted Gene
- Lj6g3v1629780.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1629780.1 Non Chatacterized Hit- tr|I1L0G0|I1L0G0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37314
PE,73.02,0,seg,NULL; HELICASE-RELATED,NULL; P-loop containing
nucleoside triphosphate hydrolases,NULL;
helicase,NODE_62166_length_1516_cov_48.048813.path1.1
(504 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G03300.3 | Symbols: DCL2 | dicer-like 2 | chr3:768020-774833 ... 542 e-154
AT3G03300.1 | Symbols: DCL2, ATDCL2 | dicer-like 2 | chr3:768020... 542 e-154
AT3G03300.2 | Symbols: DCL2 | dicer-like 2 | chr3:768020-774525 ... 525 e-149
AT1G01040.1 | Symbols: DCL1, CAF, SUS1, SIN1, ASU1, EMB76, EMB60... 256 3e-68
AT1G01040.2 | Symbols: DCL1 | dicer-like 1 | chr1:23519-31079 FO... 256 3e-68
AT5G20320.1 | Symbols: DCL4, ATDCL4 | dicer-like 4 | chr5:685957... 232 5e-61
AT5G20320.2 | Symbols: DCL4 | dicer-like 4 | chr5:6859571-686906... 203 2e-52
AT3G43920.3 | Symbols: DCL3, ATDCL3 | dicer-like 3 | chr3:157535... 181 2e-45
AT3G43920.2 | Symbols: DCL3, ATDCL3 | dicer-like 3 | chr3:157535... 180 2e-45
AT3G43920.1 | Symbols: DCL3, ATDCL3 | dicer-like 3 | chr3:157535... 148 9e-36
AT1G35530.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 61 2e-09
AT1G35530.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 59 6e-09
>AT3G03300.3 | Symbols: DCL2 | dicer-like 2 | chr3:768020-774833
REVERSE LENGTH=1388
Length = 1388
Score = 542 bits (1396), Expect = e-154, Method: Compositional matrix adjust.
Identities = 282/508 (55%), Positives = 354/508 (69%), Gaps = 7/508 (1%)
Query: 1 MLLRSYAYRLRKPSXXXXXXXXXXXXXXXQQAKALEAHTDLKVGMYYGDMGVDFWDAATW 60
MLLRSYAY RKPS QQA+AL+ HTDLKVGMY+GDMGVDFWD++TW
Sbjct: 56 MLLRSYAYLFRKPSPCFCVFLVPQVVLVTQQAEALKMHTDLKVGMYWGDMGVDFWDSSTW 115
Query: 61 KQQIEKQEVLVMTPQILLDCLRHSFIKLQMIKVLILDECHHTKGRHPYSRIMTEFYHHQL 120
KQ+++K EVLVMTP ILLD LRHSF+ L MIKVLI+DECHH G+HPY+ IM EFYH +L
Sbjct: 116 KQEVDKYEVLVMTPAILLDALRHSFLSLSMIKVLIVDECHHAGGKHPYACIMREFYHKEL 175
Query: 121 QSGISDLPRIFGMTASPVKSKAGNSELTMSKYIRDLMTLMHSKVYTCTSEAVIREFMPIS 180
SG S++PRIFGMTAS VK+K N + + K I +L TLM+SKVYTC +E+V+ F+P S
Sbjct: 176 NSGTSNVPRIFGMTASLVKTKGENLD-SYWKKIHELETLMNSKVYTCENESVLAGFVPFS 234
Query: 181 TPKFKFYEANAL-GIVFXXXXXXXXXXXXQHELFLRSTDFTKSATEYAEKRITKFFCSLM 239
TP FK+Y+ + +H L L + D S + EKR+ + +L
Sbjct: 235 TPSFKYYQHIKIPSPKRASLVEKLERLTIKHRLSLGTLDLNSSTVDSVEKRLLRISSTLT 294
Query: 240 YCLEDLGVWLAFKAAESLSSNETGPLSCGN---SANKTVKMFCLATVQELKTYLLSGPQR 296
YCL+DLG+ LA KAA+SLS+++ G + VK FC QE + G
Sbjct: 295 YCLDDLGILLAQKAAQSLSASQNDSFLWGELNMFSVALVKKFCSDASQEFLAEIPQGLNW 354
Query: 297 SISDNMKHDVETGLLTSKVFCLIDTLLEYRDLTDLRCIVFVERVITAIVLPTLLNAVLPK 356
S++ N+ + E GLLT K CLI+TLL Y L ++RCI+FV+RVITAIVL +LL +LP
Sbjct: 355 SVA-NINGNAEAGLLTLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPN 413
Query: 357 YNSWKTKFVAGNNCGLQSQSKKVHDGIVDDFRKGLVNIIVATSILEEGIDVKSCNLVIRF 416
N+WKTK+VAGNN GLQ+Q++K + IV+DFR+GLVNIIVATSILEEG+DV+SCNLVIRF
Sbjct: 414 CNNWKTKYVAGNNSGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRF 473
Query: 417 DPCHNVCSFIQSRGRARMPHSDYILMVKSGDSVTCSRLEKYLSSGDIMRKESLRHSSLPC 476
DP N+CSFIQSRGRARM +SDY++MV+SGD +T SRL KYLS G MR+ESL HS +PC
Sbjct: 474 DPASNICSFIQSRGRARMQNSDYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHSLVPC 533
Query: 477 DPLESDLFHEETYRVESTGAIVNLISSI 504
PL D E +RVESTGA V L SS+
Sbjct: 534 PPLPDD-SDEPLFRVESTGATVTLSSSV 560
>AT3G03300.1 | Symbols: DCL2, ATDCL2 | dicer-like 2 |
chr3:768020-774833 REVERSE LENGTH=1388
Length = 1388
Score = 542 bits (1396), Expect = e-154, Method: Compositional matrix adjust.
Identities = 282/508 (55%), Positives = 354/508 (69%), Gaps = 7/508 (1%)
Query: 1 MLLRSYAYRLRKPSXXXXXXXXXXXXXXXQQAKALEAHTDLKVGMYYGDMGVDFWDAATW 60
MLLRSYAY RKPS QQA+AL+ HTDLKVGMY+GDMGVDFWD++TW
Sbjct: 56 MLLRSYAYLFRKPSPCFCVFLVPQVVLVTQQAEALKMHTDLKVGMYWGDMGVDFWDSSTW 115
Query: 61 KQQIEKQEVLVMTPQILLDCLRHSFIKLQMIKVLILDECHHTKGRHPYSRIMTEFYHHQL 120
KQ+++K EVLVMTP ILLD LRHSF+ L MIKVLI+DECHH G+HPY+ IM EFYH +L
Sbjct: 116 KQEVDKYEVLVMTPAILLDALRHSFLSLSMIKVLIVDECHHAGGKHPYACIMREFYHKEL 175
Query: 121 QSGISDLPRIFGMTASPVKSKAGNSELTMSKYIRDLMTLMHSKVYTCTSEAVIREFMPIS 180
SG S++PRIFGMTAS VK+K N + + K I +L TLM+SKVYTC +E+V+ F+P S
Sbjct: 176 NSGTSNVPRIFGMTASLVKTKGENLD-SYWKKIHELETLMNSKVYTCENESVLAGFVPFS 234
Query: 181 TPKFKFYEANAL-GIVFXXXXXXXXXXXXQHELFLRSTDFTKSATEYAEKRITKFFCSLM 239
TP FK+Y+ + +H L L + D S + EKR+ + +L
Sbjct: 235 TPSFKYYQHIKIPSPKRASLVEKLERLTIKHRLSLGTLDLNSSTVDSVEKRLLRISSTLT 294
Query: 240 YCLEDLGVWLAFKAAESLSSNETGPLSCGN---SANKTVKMFCLATVQELKTYLLSGPQR 296
YCL+DLG+ LA KAA+SLS+++ G + VK FC QE + G
Sbjct: 295 YCLDDLGILLAQKAAQSLSASQNDSFLWGELNMFSVALVKKFCSDASQEFLAEIPQGLNW 354
Query: 297 SISDNMKHDVETGLLTSKVFCLIDTLLEYRDLTDLRCIVFVERVITAIVLPTLLNAVLPK 356
S++ N+ + E GLLT K CLI+TLL Y L ++RCI+FV+RVITAIVL +LL +LP
Sbjct: 355 SVA-NINGNAEAGLLTLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPN 413
Query: 357 YNSWKTKFVAGNNCGLQSQSKKVHDGIVDDFRKGLVNIIVATSILEEGIDVKSCNLVIRF 416
N+WKTK+VAGNN GLQ+Q++K + IV+DFR+GLVNIIVATSILEEG+DV+SCNLVIRF
Sbjct: 414 CNNWKTKYVAGNNSGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRF 473
Query: 417 DPCHNVCSFIQSRGRARMPHSDYILMVKSGDSVTCSRLEKYLSSGDIMRKESLRHSSLPC 476
DP N+CSFIQSRGRARM +SDY++MV+SGD +T SRL KYLS G MR+ESL HS +PC
Sbjct: 474 DPASNICSFIQSRGRARMQNSDYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHSLVPC 533
Query: 477 DPLESDLFHEETYRVESTGAIVNLISSI 504
PL D E +RVESTGA V L SS+
Sbjct: 534 PPLPDD-SDEPLFRVESTGATVTLSSSV 560
>AT3G03300.2 | Symbols: DCL2 | dicer-like 2 | chr3:768020-774525
REVERSE LENGTH=1374
Length = 1374
Score = 525 bits (1352), Expect = e-149, Method: Compositional matrix adjust.
Identities = 270/479 (56%), Positives = 342/479 (71%), Gaps = 7/479 (1%)
Query: 30 QQAKALEAHTDLKVGMYYGDMGVDFWDAATWKQQIEKQEVLVMTPQILLDCLRHSFIKLQ 89
QQA+AL+ HTDLKVGMY+GDMGVDFWD++TWKQ+++K EVLVMTP ILLD LRHSF+ L
Sbjct: 71 QQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVDKYEVLVMTPAILLDALRHSFLSLS 130
Query: 90 MIKVLILDECHHTKGRHPYSRIMTEFYHHQLQSGISDLPRIFGMTASPVKSKAGNSELTM 149
MIKVLI+DECHH G+HPY+ IM EFYH +L SG S++PRIFGMTAS VK+K N + +
Sbjct: 131 MIKVLIVDECHHAGGKHPYACIMREFYHKELNSGTSNVPRIFGMTASLVKTKGENLD-SY 189
Query: 150 SKYIRDLMTLMHSKVYTCTSEAVIREFMPISTPKFKFYEANAL-GIVFXXXXXXXXXXXX 208
K I +L TLM+SKVYTC +E+V+ F+P STP FK+Y+ +
Sbjct: 190 WKKIHELETLMNSKVYTCENESVLAGFVPFSTPSFKYYQHIKIPSPKRASLVEKLERLTI 249
Query: 209 QHELFLRSTDFTKSATEYAEKRITKFFCSLMYCLEDLGVWLAFKAAESLSSNETGPLSCG 268
+H L L + D S + EKR+ + +L YCL+DLG+ LA KAA+SLS+++ G
Sbjct: 250 KHRLSLGTLDLNSSTVDSVEKRLLRISSTLTYCLDDLGILLAQKAAQSLSASQNDSFLWG 309
Query: 269 N---SANKTVKMFCLATVQELKTYLLSGPQRSISDNMKHDVETGLLTSKVFCLIDTLLEY 325
+ VK FC QE + G S++ N+ + E GLLT K CLI+TLL Y
Sbjct: 310 ELNMFSVALVKKFCSDASQEFLAEIPQGLNWSVA-NINGNAEAGLLTLKTVCLIETLLGY 368
Query: 326 RDLTDLRCIVFVERVITAIVLPTLLNAVLPKYNSWKTKFVAGNNCGLQSQSKKVHDGIVD 385
L ++RCI+FV+RVITAIVL +LL +LP N+WKTK+VAGNN GLQ+Q++K + IV+
Sbjct: 369 SSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVAGNNSGLQNQTRKKQNEIVE 428
Query: 386 DFRKGLVNIIVATSILEEGIDVKSCNLVIRFDPCHNVCSFIQSRGRARMPHSDYILMVKS 445
DFR+GLVNIIVATSILEEG+DV+SCNLVIRFDP N+CSFIQSRGRARM +SDY++MV+S
Sbjct: 429 DFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGRARMQNSDYLMMVES 488
Query: 446 GDSVTCSRLEKYLSSGDIMRKESLRHSSLPCDPLESDLFHEETYRVESTGAIVNLISSI 504
GD +T SRL KYLS G MR+ESL HS +PC PL D E +RVESTGA V L SS+
Sbjct: 489 GDLLTQSRLMKYLSGGKRMREESLDHSLVPCPPLPDD-SDEPLFRVESTGATVTLSSSV 546
>AT1G01040.1 | Symbols: DCL1, CAF, SUS1, SIN1, ASU1, EMB76, EMB60,
ATDCL1 | dicer-like 1 | chr1:23519-31079 FORWARD
LENGTH=1909
Length = 1909
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 177/541 (32%), Positives = 266/541 (49%), Gaps = 76/541 (14%)
Query: 30 QQAKALEAHTDLKVGMYYGDMGVDFWDAATWKQQIEKQEVLVMTPQILLDCLRHSFIKLQ 89
QQA+ + T +VG Y G+MG DFWD+ W+++ E ++VLVMT QILL+ LRHS I+++
Sbjct: 311 QQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLNILRHSIIRME 370
Query: 90 MIKVLILDECHHTKGRHPYSRIMTEFYHHQLQSGISDLPRIFGMTASPVKSKAGNSELTM 149
I +LILDECHH +HPYS +M+EFYH + P IFGMTASPV K +S++
Sbjct: 371 TIDLLILDECHHAVKKHPYSLVMSEFYHTTPKD---KRPAIFGMTASPVNLKGVSSQVDC 427
Query: 150 SKYIRDLMTLMHSKVYTCTSEAVIREFMPISTPKFKFYEANAL---------GIVFXXXX 200
+ IR+L T + S V T + + +P+ + Y+ A ++
Sbjct: 428 AIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQMIAAVEE 487
Query: 201 XXXXXXXXQHELFLRSTDF-------------TKSATEYAEKRITKFFCSLMYCLEDLGV 247
F+ + D ++ ++ A I K ++ Y L +LG
Sbjct: 488 AAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHKLR-AINYTLAELGQ 546
Query: 248 WLAFKAAESLSSNETGPLSCGNSANKTVKM-----FCLATVQELKTYLLSG--------- 293
W A+K +S S L N V + + V L+ LL G
Sbjct: 547 WCAYKVGQSFLS----ALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEGAAAEKVAAE 602
Query: 294 ------------------PQRSISDNMKH-------DVETGLLTSKVFCLIDTLLEYRDL 328
P + +H V G +T KV LI LL+Y+
Sbjct: 603 VGKPENGNAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQSLIKLLLKYQHT 662
Query: 329 TDLRCIVFVERVITAIVLPTLLNAVLPKYNSWKTKFVAGNNCGLQSQSKKVHDGIVDDFR 388
D R IVFVERV+ A+VLP + A LP + + + G+N + +S ++ D I FR
Sbjct: 663 ADFRAIVFVERVVAALVLPKVF-AELPSLSFIRCASMIGHNNSQEMKSSQMQDTI-SKFR 720
Query: 389 KGLVNIIVATSILEEGIDVKSCNLVIRFDPCHNVCSFIQSRGRARMPHSDYILMVKSGDS 448
G V ++VATS+ EEG+D++ CN+V+RFD V ++IQSRGRAR P SDYILMV+ G+
Sbjct: 721 DGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNV 780
Query: 449 VTCSRLEKYLSSGDIMRKESLRHSSLP-----CDPLESDLFHEETYRVESTGAIVNLISS 503
+ L +S + +RKE++ + L + D Y+VE+TGA+V+L S+
Sbjct: 781 SHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMVSLNSA 840
Query: 504 I 504
+
Sbjct: 841 V 841
>AT1G01040.2 | Symbols: DCL1 | dicer-like 1 | chr1:23519-31079
FORWARD LENGTH=1910
Length = 1910
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 177/541 (32%), Positives = 266/541 (49%), Gaps = 76/541 (14%)
Query: 30 QQAKALEAHTDLKVGMYYGDMGVDFWDAATWKQQIEKQEVLVMTPQILLDCLRHSFIKLQ 89
QQA+ + T +VG Y G+MG DFWD+ W+++ E ++VLVMT QILL+ LRHS I+++
Sbjct: 311 QQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLNILRHSIIRME 370
Query: 90 MIKVLILDECHHTKGRHPYSRIMTEFYHHQLQSGISDLPRIFGMTASPVKSKAGNSELTM 149
I +LILDECHH +HPYS +M+EFYH + P IFGMTASPV K +S++
Sbjct: 371 TIDLLILDECHHAVKKHPYSLVMSEFYHTTPKD---KRPAIFGMTASPVNLKGVSSQVDC 427
Query: 150 SKYIRDLMTLMHSKVYTCTSEAVIREFMPISTPKFKFYEANAL---------GIVFXXXX 200
+ IR+L T + S V T + + +P+ + Y+ A ++
Sbjct: 428 AIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQMIAAVEE 487
Query: 201 XXXXXXXXQHELFLRSTDF-------------TKSATEYAEKRITKFFCSLMYCLEDLGV 247
F+ + D ++ ++ A I K ++ Y L +LG
Sbjct: 488 AAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHKLR-AINYTLAELGQ 546
Query: 248 WLAFKAAESLSSNETGPLSCGNSANKTVKM-----FCLATVQELKTYLLSG--------- 293
W A+K +S S L N V + + V L+ LL G
Sbjct: 547 WCAYKVGQSFLS----ALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEGAAAEKVAAE 602
Query: 294 ------------------PQRSISDNMKH-------DVETGLLTSKVFCLIDTLLEYRDL 328
P + +H V G +T KV LI LL+Y+
Sbjct: 603 VGKPENGNAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQSLIKLLLKYQHT 662
Query: 329 TDLRCIVFVERVITAIVLPTLLNAVLPKYNSWKTKFVAGNNCGLQSQSKKVHDGIVDDFR 388
D R IVFVERV+ A+VLP + A LP + + + G+N + +S ++ D I FR
Sbjct: 663 ADFRAIVFVERVVAALVLPKVF-AELPSLSFIRCASMIGHNNSQEMKSSQMQDTI-SKFR 720
Query: 389 KGLVNIIVATSILEEGIDVKSCNLVIRFDPCHNVCSFIQSRGRARMPHSDYILMVKSGDS 448
G V ++VATS+ EEG+D++ CN+V+RFD V ++IQSRGRAR P SDYILMV+ G+
Sbjct: 721 DGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNV 780
Query: 449 VTCSRLEKYLSSGDIMRKESLRHSSLP-----CDPLESDLFHEETYRVESTGAIVNLISS 503
+ L +S + +RKE++ + L + D Y+VE+TGA+V+L S+
Sbjct: 781 SHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMVSLNSA 840
Query: 504 I 504
+
Sbjct: 841 V 841
>AT5G20320.1 | Symbols: DCL4, ATDCL4 | dicer-like 4 |
chr5:6859571-6869068 REVERSE LENGTH=1702
Length = 1702
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 172/490 (35%), Positives = 260/490 (53%), Gaps = 32/490 (6%)
Query: 30 QQAKALEAHTDLKVGMYYGDMGVDFWDAATWKQQIEKQEVLVMTPQILLDCLRHSFIKLQ 89
QQAK + + KV ++ G + + W+++I EVLVMTPQILL L+H FIK++
Sbjct: 185 QQAKVIADSVNFKVAIHCGGKRI-VKSHSEWEREIAANEVLVMTPQILLHNLQHCFIKME 243
Query: 90 MIKVLILDECHHTK--GRHPYSRIMTEFYHHQ-LQSGISDLPRIFGMTASPVKSKAGNSE 146
I +LI DECHH + HPY+ IM FY + LQ PRIFGMTASPV K
Sbjct: 244 CISLLIFDECHHAQQQSNHPYAEIMKVFYKSESLQR-----PRIFGMTASPVVGKGSFQS 298
Query: 147 LTMSKYIRDLMTLMHSKVYTCTSEAVIREFMPISTPKFK-FYEANALGIVFXXXXXXXXX 205
+SK I L L+++KVY+ S + F +S+P K +Y +AL
Sbjct: 299 ENLSKSINSLENLLNAKVYSVESNVQLDGF--VSSPLVKVYYYRSALSDASQSTIRYENM 356
Query: 206 XXXQHELFLRS----TDFTKSATEYAEKRITK-FFCSLMYCLEDLGVWLAFKAAE-SLSS 259
+ L S D ++ T + KR+ K +L+Y L +LG+W A +AA+ L+S
Sbjct: 357 LEDIKQRCLASLKLLIDTHQTQTLLSMKRLLKRSHDNLIYTLLNLGLWGAIQAAKIQLNS 416
Query: 260 N---ETGPLSCGNSANKTVKMFCLATVQELKTYLLSGPQRSISDNMK-HDVETGLLTSKV 315
+ + P+ N +K + + L + + + SD + ++ L + K+
Sbjct: 417 DHNVQDEPVG-KNPKSKICDTYLSMAAEALSSGV--AKDENASDLLSLAALKEPLFSRKL 473
Query: 316 FCLIDTLLEYRDLTDLRCIVFVERVITAIVLPTLLNAVLPKYNSWKTKFVAGNNCGLQSQ 375
LI L +R ++CI+FV R++TA L +LN L SWK+ F+ G + GL+S
Sbjct: 474 VQLIKILSVFRLEPHMKCIIFVNRIVTARTLSCILNN-LELLRSWKSDFLVGLSSGLKSM 532
Query: 376 SKKVHDGIVDDFRKGLVNIIVATSILEEGIDVKSCNLVIRFDPCHNVCSFIQSRGRARMP 435
S++ + I+ F+ +N++VAT + EEG+D+++C LVIR+D V SFIQSRGRARMP
Sbjct: 533 SRRSMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPETVTSFIQSRGRARMP 592
Query: 436 HSDYILMVKSGDSVTCSRLEKYLSSGDIMRKE-SLRHSSLPCDPLESDLFHEETYRVEST 494
S+Y +V SG+ +E + + D M E + R S C L+ EE Y+V T
Sbjct: 593 QSEYAFLVDSGNEKEMDLIENFKVNEDRMNLEITYRSSEETCPRLD-----EELYKVHET 647
Query: 495 GAIVNLISSI 504
GA ++ SSI
Sbjct: 648 GACISGGSSI 657
>AT5G20320.2 | Symbols: DCL4 | dicer-like 4 | chr5:6859571-6869068
REVERSE LENGTH=1688
Length = 1688
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 161/490 (32%), Positives = 248/490 (50%), Gaps = 46/490 (9%)
Query: 30 QQAKALEAHTDLKVGMYYGDMGVDFWDAATWKQQIEKQEVLVMTPQILLDCLRHSFIKLQ 89
QQAK + + KV ++ G + + W+++I E H FIK++
Sbjct: 185 QQAKVIADSVNFKVAIHCGGKRI-VKSHSEWEREIAANE--------------HCFIKME 229
Query: 90 MIKVLILDECHHTK--GRHPYSRIMTEFYHHQ-LQSGISDLPRIFGMTASPVKSKAGNSE 146
I +LI DECHH + HPY+ IM FY + LQ PRIFGMTASPV K
Sbjct: 230 CISLLIFDECHHAQQQSNHPYAEIMKVFYKSESLQR-----PRIFGMTASPVVGKGSFQS 284
Query: 147 LTMSKYIRDLMTLMHSKVYTCTSEAVIREFMPISTPKFK-FYEANALGIVFXXXXXXXXX 205
+SK I L L+++KVY+ S + F +S+P K +Y +AL
Sbjct: 285 ENLSKSINSLENLLNAKVYSVESNVQLDGF--VSSPLVKVYYYRSALSDASQSTIRYENM 342
Query: 206 XXXQHELFLRS----TDFTKSATEYAEKRITK-FFCSLMYCLEDLGVWLAFKAAE-SLSS 259
+ L S D ++ T + KR+ K +L+Y L +LG+W A +AA+ L+S
Sbjct: 343 LEDIKQRCLASLKLLIDTHQTQTLLSMKRLLKRSHDNLIYTLLNLGLWGAIQAAKIQLNS 402
Query: 260 N---ETGPLSCGNSANKTVKMFCLATVQELKTYLLSGPQRSISDNMK-HDVETGLLTSKV 315
+ + P+ N +K + + L + + + SD + ++ L + K+
Sbjct: 403 DHNVQDEPVG-KNPKSKICDTYLSMAAEALSSGV--AKDENASDLLSLAALKEPLFSRKL 459
Query: 316 FCLIDTLLEYRDLTDLRCIVFVERVITAIVLPTLLNAVLPKYNSWKTKFVAGNNCGLQSQ 375
LI L +R ++CI+FV R++TA L +LN L SWK+ F+ G + GL+S
Sbjct: 460 VQLIKILSVFRLEPHMKCIIFVNRIVTARTLSCILNN-LELLRSWKSDFLVGLSSGLKSM 518
Query: 376 SKKVHDGIVDDFRKGLVNIIVATSILEEGIDVKSCNLVIRFDPCHNVCSFIQSRGRARMP 435
S++ + I+ F+ +N++VAT + EEG+D+++C LVIR+D V SFIQSRGRARMP
Sbjct: 519 SRRSMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPETVTSFIQSRGRARMP 578
Query: 436 HSDYILMVKSGDSVTCSRLEKYLSSGDIMRKE-SLRHSSLPCDPLESDLFHEETYRVEST 494
S+Y +V SG+ +E + + D M E + R S C L+ EE Y+V T
Sbjct: 579 QSEYAFLVDSGNEKEMDLIENFKVNEDRMNLEITYRSSEETCPRLD-----EELYKVHET 633
Query: 495 GAIVNLISSI 504
GA ++ SSI
Sbjct: 634 GACISGGSSI 643
>AT3G43920.3 | Symbols: DCL3, ATDCL3 | dicer-like 3 |
chr3:15753548-15760830 FORWARD LENGTH=1570
Length = 1570
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/457 (31%), Positives = 221/457 (48%), Gaps = 44/457 (9%)
Query: 30 QQAKALEAHTDLKVGMYYGDMGVDFWDAATWKQQIEKQEVLVMTPQILLDCLRHSFIKLQ 89
QQ + A +LKV Y+G GVD W + W ++ K +VLVMTPQILLD LR +F+KL+
Sbjct: 103 QQCCEIRALVNLKVEEYFGAKGVDKWTSQRWDEEFSKHDVLVMTPQILLDVLRSAFLKLE 162
Query: 90 MIKVLILDECHHTKGRHPYSRIMTEFYHHQLQSGISDLPRIFGMTASPVKSKAGNSELTM 149
M+ +LI+DECHHT G HPY+++M EFYH + P+IFG+TAS V KA SEL
Sbjct: 163 MVCLLIIDECHHTTGNHPYAKLMKEFYHES-----TSKPKIFGLTASAVIRKAQVSELE- 216
Query: 150 SKYIRDLMTLMHSKVYTCTSEAVIREFM------PI---STPKFKFYEANALGIVFXXXX 200
LM SK++ + +F PI +P L
Sbjct: 217 --------RLMDSKIFNPEEREGVEKFATTVKEGPILYNPSPSCSLELKEKLETSHLKFD 268
Query: 201 XXXXXXXXQHELFLRSTDFTKSATEYAEKRITKFFCSLMYCLEDLGVWLAFKAAESLSSN 260
EL S + E +KR++ + +++CL++LG+ A AAE +
Sbjct: 269 ASLRRL---QELGKDSFLNMDNKFETYQKRLSIDYREILHCLDNLGLICAHLAAE-VCLE 324
Query: 261 ETGPLSCGNSANKTVKMFCLATVQE-LKTYLLSGPQ--RSISD---NMKHDVETGLLTSK 314
+ + K M C +++ L T + PQ +S+ D N V +G ++ K
Sbjct: 325 KISDTKEESETYKECSMVCKEFLEDILSTIGVYLPQDDKSLVDLQQNHLSAVISGHVSPK 384
Query: 315 VFCLIDTLLEYRDLTDLRCIVFVERVITAIVLPTLL--NAVLPKYNSWKTKFVAGNNCGL 372
+ L L +R +C++ VER+ITA V+ + A L N ++ NN
Sbjct: 385 LKELFHLLDSFRGDKQKQCLILVERIITAKVIERFVKKEASLAYLNVL---YLTENNPST 441
Query: 373 QSQSKKVHDGIVDDFRKGLVNIIVATSILEEGIDVKSCNLVIRFDPCHNVCSFIQSRGRA 432
++K+ I D F+ G VN++ T ++EEG V C+ ++ FD +CS+ QS+ A
Sbjct: 442 NVSAQKMQIEIPDLFQHGKVNLLFITDVVEEGFQVPDCSCMVCFDLPKTMCSYSQSQKHA 501
Query: 433 RMPHSDYILMVKSGDSVTCSRLEKYLSSGDIMRKESL 469
+ +S I+ ++ G+ L D+MR+E L
Sbjct: 502 KQSNSKSIMFLERGNPKQRDHLH------DLMRREVL 532
>AT3G43920.2 | Symbols: DCL3, ATDCL3 | dicer-like 3 |
chr3:15753548-15760830 FORWARD LENGTH=1580
Length = 1580
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/458 (30%), Positives = 223/458 (48%), Gaps = 36/458 (7%)
Query: 30 QQAKALEAHTDLKVGMYYGDMGVDFWDAATWKQQIEKQEVLVMTPQILLDCLRHSFIKLQ 89
QQ + A +LKV Y+G GVD W + W ++ K +VLVMTPQILLD LR +F+KL+
Sbjct: 103 QQCCEIRALVNLKVEEYFGAKGVDKWTSQRWDEEFSKHDVLVMTPQILLDVLRSAFLKLE 162
Query: 90 MIKVLILDECHHTKGRHPYSRIMTEFYHHQLQSGISDLPRIFGMTASPVKSKA-GNSELT 148
M+ +LI+DECHHT G HPY+++M EFYH + P+IFG+TAS V K +S
Sbjct: 163 MVCLLIIDECHHTTGNHPYAKLMKEFYHES-----TSKPKIFGLTASAVIRKGIVSSPSN 217
Query: 149 MSKYIRDLMTLMHSKVYTCTSEAVIREFM------PI---STPKFKFYEANALGIVFXXX 199
+ + +L LM SK++ + +F PI +P L
Sbjct: 218 YAAQVSELERLMDSKIFNPEEREGVEKFATTVKEGPILYNPSPSCSLELKEKLETSHLKF 277
Query: 200 XXXXXXXXXQHELFLRSTDFTKSATEYAEKRITKFFCSLMYCLEDLGVWLAFKAAESLSS 259
EL S + E +KR++ + +++CL++LG+ A AAE +
Sbjct: 278 DASLRRL---QELGKDSFLNMDNKFETYQKRLSIDYREILHCLDNLGLICAHLAAE-VCL 333
Query: 260 NETGPLSCGNSANKTVKMFCLATVQE-LKTYLLSGPQ--RSISD---NMKHDVETGLLTS 313
+ + K M C +++ L T + PQ +S+ D N V +G ++
Sbjct: 334 EKISDTKEESETYKECSMVCKEFLEDILSTIGVYLPQDDKSLVDLQQNHLSAVISGHVSP 393
Query: 314 KVFCLIDTLLEYRDLTDLRCIVFVERVITAIVLPTLL--NAVLPKYNSWKTKFVAGNNCG 371
K+ L L +R +C++ VER+ITA V+ + A L N ++ NN
Sbjct: 394 KLKELFHLLDSFRGDKQKQCLILVERIITAKVIERFVKKEASLAYLNVL---YLTENNPS 450
Query: 372 LQSQSKKVHDGIVDDFRKGLVNIIVATSILEEGIDVKSCNLVIRFDPCHNVCSFIQSRGR 431
++K+ I D F+ G VN++ T ++EEG V C+ ++ FD +CS+ QS+
Sbjct: 451 TNVSAQKMQIEIPDLFQHGKVNLLFITDVVEEGFQVPDCSCMVCFDLPKTMCSYSQSQKH 510
Query: 432 ARMPHSDYILMVKSGDSVTCSRLEKYLSSGDIMRKESL 469
A+ +S I+ ++ G+ L D+MR+E L
Sbjct: 511 AKQSNSKSIMFLERGNPKQRDHLH------DLMRREVL 542
>AT3G43920.1 | Symbols: DCL3, ATDCL3 | dicer-like 3 |
chr3:15753548-15760830 FORWARD LENGTH=1531
Length = 1531
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 212/447 (47%), Gaps = 62/447 (13%)
Query: 31 QAKALEAHTDLKVGMYYGDMGVDFWDAATWKQQIEKQEVLVMTPQILLDCLRHSFIKLQM 90
Q + A +LKV Y+G GVD W + W ++ K +VLVMTPQILLD LR +F+KL+M
Sbjct: 101 QCCEIRALVNLKVEEYFGAKGVDKWTSQRWDEEFSKHDVLVMTPQILLDVLRSAFLKLEM 160
Query: 91 IKVLILDECHHTKGRHPYSRIMTEFYHHQLQSGISDLPRIFGMTASPVKSKAGNSELTMS 150
+ +LI+DECHHT G HPY+++M + ++ + + G+ A+ VK
Sbjct: 161 VCLLIIDECHHTTGNHPYAKLM-KIFNPEEREGVEKF-------ATTVKEGP-------- 204
Query: 151 KYIRDLMTLMHSKVYTCTSEAVIREFMPISTPKFKFYEANALGIVFXXXXXXXXXXXXQH 210
++++ +C+ E ++E + S KF
Sbjct: 205 --------ILYNPSPSCSLE--LKEKLETSHLKFD------------------ASLRRLQ 236
Query: 211 ELFLRSTDFTKSATEYAEKRITKFFCSLMYCLEDLGVWLAFKAAESLSSNETGPLSCGNS 270
EL S + E +KR++ + +++CL++LG+ A AAE + + +
Sbjct: 237 ELGKDSFLNMDNKFETYQKRLSIDYREILHCLDNLGLICAHLAAE-VCLEKISDTKEESE 295
Query: 271 ANKTVKMFCLATVQE-LKTYLLSGPQ--RSISD---NMKHDVETGLLTSKVFCLIDTLLE 324
K M C +++ L T + PQ +S+ D N V +G ++ K+ L L
Sbjct: 296 TYKECSMVCKEFLEDILSTIGVYLPQDDKSLVDLQQNHLSAVISGHVSPKLKELFHLLDS 355
Query: 325 YRDLTDLRCIVFVERVITAIVLPTLL--NAVLPKYNSWKTKFVAGNNCGLQSQSKKVHDG 382
+R +C++ VER+ITA V+ + A L N ++ NN ++K+
Sbjct: 356 FRGDKQKQCLILVERIITAKVIERFVKKEASLAYLNVL---YLTENNPSTNVSAQKMQIE 412
Query: 383 IVDDFRKGLVNIIVATSILEEGIDVKSCNLVIRFDPCHNVCSFIQSRGRARMPHSDYILM 442
I D F+ G VN++ T ++EEG V C+ ++ FD +CS+ QS+ A+ +S I+
Sbjct: 413 IPDLFQHGKVNLLFITDVVEEGFQVPDCSCMVCFDLPKTMCSYSQSQKHAKQSNSKSIMF 472
Query: 443 VKSGDSVTCSRLEKYLSSGDIMRKESL 469
++ G+ L D+MR+E L
Sbjct: 473 LERGNPKQRDHLH------DLMRREVL 493
>AT1G35530.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:13089994-13097078 FORWARD LENGTH=1324
Length = 1324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 162/406 (39%), Gaps = 61/406 (15%)
Query: 60 WKQQIEKQEVLVMTPQILLDCLRHSFIKLQMIKVLILDECHHTKGRHPYSRIMTEFYHHQ 119
WK + V +TPQ+L ++ + L++DE H G + Y ++ E
Sbjct: 205 WKSK----RVFFVTPQVLEKDIQSGTCLTNYLVCLVIDEAHRALGNYSYCVVVRELMAVP 260
Query: 120 LQSGISDLPRIFGMTASP-VKSKA-----GNSELTMSKYIR----DLMTLMHSKVYTCTS 169
+Q RI +TA+P K++A N +++ +Y D+ +H +
Sbjct: 261 IQL------RILALTATPGSKTQAIQGIIDNLQISTLEYRNESDHDVCPYVHDRKLEVIE 314
Query: 170 EAVIREFMPISTPKFKFYEANALGIV-FXXXXXXXXXXXXQHELFLRSTDFTKSA----T 224
+ ++ +S F A+ + F HE+ + F ++
Sbjct: 315 VPLGQDADDVSKRLFHVIRPYAVRLKNFGVNLNRDIQTLSPHEVLMARDKFRQAPLPGLP 374
Query: 225 EYAEKRITKFFCSL--MYCLEDL----GVWLAFKAAESLSSNETGPLSCGNSANKTVKMF 278
+ F +L +Y + L G+ A++ E + GP + S N+ ++M
Sbjct: 375 HVNHGDVESCFAALITLYHIRKLLSSHGIRPAYEMLEE--KLKEGPFARLMSKNEDIRMT 432
Query: 279 CLATVQELKTYLLSGPQRSISDNMKHDVETGLLTSKVFCLIDTLLEYRDLTDLRCIVFVE 338
L Q L H + L+ + L+D + +D R I+F
Sbjct: 433 KLLMQQRLS----------------HGAPSPKLSKMLEILVDHF-KVKDPKTSRVIIFSN 475
Query: 339 RVITAIVLPTLLNAVLPKYNSWKTKFVAGNNCG--LQSQSKKVHDGIVDDFRKGLVNIIV 396
+ + ++NA+ + K G + G L+ QS+K+ +++ FR G N+IV
Sbjct: 476 FRGS---VRDIMNALSNIGDMVKATEFIGQSSGKTLKGQSQKIQQAVLEKFRAGGFNVIV 532
Query: 397 ATSILEEGIDVKSCNLVIRFDPCHNVCSFIQSRGR------ARMPH 436
ATSI EEG+D+ +LVI FD + IQ GR R+PH
Sbjct: 533 ATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRTGRKNNGRIPH 578
>AT1G35530.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:13089994-13097078 FORWARD LENGTH=1390
Length = 1390
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 91/430 (21%), Positives = 171/430 (39%), Gaps = 55/430 (12%)
Query: 60 WKQQIEKQEVLVMTPQILLDCLRHSFIKLQMIKVLILDECHHTKGRHPYSRIMTEFYHHQ 119
WK + V +TPQ+L ++ + L++DE H G + Y ++ E
Sbjct: 205 WKSK----RVFFVTPQVLEKDIQSGTCLTNYLVCLVIDEAHRALGNYSYCVVVRELMAVP 260
Query: 120 LQSGISDLPRIFGMTASP------VKSKAGNSELTMSKYIR----DLMTLMHSKVYTCTS 169
+Q RI +TA+P ++ N +++ +Y D+ +H +
Sbjct: 261 IQL------RILALTATPGSKTQAIQGIIDNLQISTLEYRNESDHDVCPYVHDRKLEVIE 314
Query: 170 EAVIREFMPISTPKFKFYEANALGIV-FXXXXXXXXXXXXQHELFLRSTDFTKSA----T 224
+ ++ +S F A+ + F HE+ + F ++
Sbjct: 315 VPLGQDADDVSKRLFHVIRPYAVRLKNFGVNLNRDIQTLSPHEVLMARDKFRQAPLPGLP 374
Query: 225 EYAEKRITKFFCSL--MYCLEDL----GVWLAFKAAESLSSNETGPLSCGNSANKTVKMF 278
+ F +L +Y + L G+ A++ E + GP + S N+ ++M
Sbjct: 375 HVNHGDVESCFAALITLYHIRKLLSSHGIRPAYEMLEE--KLKEGPFARLMSKNEDIRMT 432
Query: 279 CLATVQELKTYLLSGPQRSISDNMKHDVETGLLTSKVFCLIDTLLEYRDLTDLRCIVFVE 338
L Q L H + L+ + L+D + +D R I+F
Sbjct: 433 KLLMQQRLS----------------HGAPSPKLSKMLEILVDHF-KVKDPKTSRVIIFSN 475
Query: 339 RVITAIVLPTLLNAVLPKYNSWKTKFVAGNNCG--LQSQSKKVHDGIVDDFRKGLVNIIV 396
+ + ++NA+ + K G + G L+ QS+K+ +++ FR G N+IV
Sbjct: 476 FRGS---VRDIMNALSNIGDMVKATEFIGQSSGKTLKGQSQKIQQAVLEKFRAGGFNVIV 532
Query: 397 ATSILEEGIDVKSCNLVIRFDPCHNVCSFIQSRGRARMPHSDYILMVKSGDSVTCSRLEK 456
ATSI EEG+D+ +LVI FD + IQ GR ++ L+V + + + +
Sbjct: 533 ATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRTGRKNNGRPLLVLACEGSEKNSYMR 592
Query: 457 YLSSGDIMRK 466
+SG ++K
Sbjct: 593 KQASGRAIKK 602