Miyakogusa Predicted Gene

Lj6g3v1618410.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1618410.2 Non Chatacterized Hit- tr|I1MAZ9|I1MAZ9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56230
PE,88.29,0,CLATHRIN COAT ASSEMBLY PROTEIN AP-4,NULL; CLATHRIN COAT
ASSEMBLY PROTEIN,NULL; seg,NULL; CLATHRINADP,CUFF.59689.2
         (481 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G24550.2 | Symbols:  | Clathrin adaptor complexes medium subu...   716   0.0  
AT4G24550.3 | Symbols:  | Clathrin adaptor complexes medium subu...   615   e-176
AT4G24550.1 | Symbols:  | Clathrin adaptor complexes medium subu...   612   e-175
AT1G60780.1 | Symbols: HAP13 | Clathrin adaptor complexes medium...   239   3e-63
AT1G10730.1 | Symbols:  | Clathrin adaptor complexes medium subu...   234   1e-61
AT5G46630.1 | Symbols:  | Clathrin adaptor complexes medium subu...   226   3e-59
AT5G46630.2 | Symbols:  | Clathrin adaptor complexes medium subu...   221   6e-58
AT1G56590.1 | Symbols: ZIP4 | Clathrin adaptor complexes medium ...   142   4e-34

>AT4G24550.2 | Symbols:  | Clathrin adaptor complexes medium subunit
           family protein | chr4:12675873-12678903 FORWARD
           LENGTH=451
          Length = 451

 Score =  716 bits (1847), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/432 (79%), Positives = 378/432 (87%), Gaps = 1/432 (0%)

Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWEDGGLEEAPPVFNVDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYR EVPKGS E FFRKVKFW++ G  EAPP+FNVDGVNYFH
Sbjct: 2   MISQFFVLSQRGDNIVFRDYRAEVPKGSTETFFRKVKFWKEDGNAEAPPIFNVDGVNYFH 61

Query: 61  VKVVGLLFVATTRVNISPSFVFELLQRIARVVKDYLGILNEDSIRKNFVLVYELLDEVMD 120
           VKVVGL FVATTRVN+SPS V ELLQRIARV+KDYLG+LNEDS RKNFVLVYELLDEV+D
Sbjct: 62  VKVVGLYFVATTRVNVSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVID 121

Query: 121 FGYVQTTSTELLKSYVFNEPIVIDAARLSPLGPAAMFSQGTKRMPGIAVTKSVVATEPGG 180
           FGYVQTTSTE+LKSY+FNEPIV+  ARL P+ PAA+F+QG KRMPG AVTKSVVA +PGG
Sbjct: 122 FGYVQTTSTEVLKSYIFNEPIVVSPARLQPIDPAAIFTQGAKRMPGTAVTKSVVANDPGG 181

Query: 181 RRREEIFVDIIEKISLTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIXXXXX 240
           RRREEIFVDIIEKIS+TFSSSGYILTSEIDGTIQMKSYL+GNPEIRLALNEDL+I     
Sbjct: 182 RRREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLNIGRGGR 241

Query: 241 XXXXXXXXXXXXPVLLDDCNFHESVRLDSFDTDRTLSLVPPDGEFPVMNYRITQEFRPPF 300
                        V+LDDCNFHESVRLDSFD+DRTLSLVPPDGEFPVMNYR+TQEF+PPF
Sbjct: 242 SVYDYRSSSGSG-VILDDCNFHESVRLDSFDSDRTLSLVPPDGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGSLKAEVILKVNAQFASSITANTVKVQMPLPKCTTRVSFELEPGAVGQTTD 360
            +N LIEEAG LKAEVI+K+ A+F S I ANT+ VQMPLP  T+R SFELEPGA GQ TD
Sbjct: 301 HVNTLIEEAGRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQRTD 360

Query: 361 FKEANKRLEWSLKKITGGSEHTLRAKLTFSQEIHGNITKESGPVSMTFTIPMYNTSQLQV 420
           FKE+NK LEW+LKKI GG EHTLRAKLTFSQE HGNITKE+GPVSMTFTIPMYN S+LQV
Sbjct: 361 FKESNKMLEWNLKKIVGGGEHTLRAKLTFSQEFHGNITKEAGPVSMTFTIPMYNVSKLQV 420

Query: 421 KYLQISKKSGTH 432
           KYLQI+KKS ++
Sbjct: 421 KYLQIAKKSSSY 432


>AT4G24550.3 | Symbols:  | Clathrin adaptor complexes medium subunit
           family protein | chr4:12675873-12678689 FORWARD
           LENGTH=385
          Length = 385

 Score =  615 bits (1586), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 296/375 (78%), Positives = 326/375 (86%), Gaps = 1/375 (0%)

Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWEDGGLEEAPPVFNVDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYR EVPKGS E FFRKVKFW++ G  EAPP+FNVDGVNYFH
Sbjct: 2   MISQFFVLSQRGDNIVFRDYRAEVPKGSTETFFRKVKFWKEDGNAEAPPIFNVDGVNYFH 61

Query: 61  VKVVGLLFVATTRVNISPSFVFELLQRIARVVKDYLGILNEDSIRKNFVLVYELLDEVMD 120
           VKVVGL FVATTRVN+SPS V ELLQRIARV+KDYLG+LNEDS RKNFVLVYELLDEV+D
Sbjct: 62  VKVVGLYFVATTRVNVSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVID 121

Query: 121 FGYVQTTSTELLKSYVFNEPIVIDAARLSPLGPAAMFSQGTKRMPGIAVTKSVVATEPGG 180
           FGYVQTTSTE+LKSY+FNEPIV+  ARL P+ PAA+F+QG KRMPG AVTKSVVA +PGG
Sbjct: 122 FGYVQTTSTEVLKSYIFNEPIVVSPARLQPIDPAAIFTQGAKRMPGTAVTKSVVANDPGG 181

Query: 181 RRREEIFVDIIEKISLTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIXXXXX 240
           RRREEIFVDIIEKIS+TFSSSGYILTSEIDGTIQMKSYL+GNPEIRLALNEDL+I     
Sbjct: 182 RRREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLNIGRGGR 241

Query: 241 XXXXXXXXXXXXPVLLDDCNFHESVRLDSFDTDRTLSLVPPDGEFPVMNYRITQEFRPPF 300
                        V+LDDCNFHESVRLDSFD+DRTLSLVPPDGEFPVMNYR+TQEF+PPF
Sbjct: 242 SVYDYRSSSGSG-VILDDCNFHESVRLDSFDSDRTLSLVPPDGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGSLKAEVILKVNAQFASSITANTVKVQMPLPKCTTRVSFELEPGAVGQTTD 360
            +N LIEEAG LKAEVI+K+ A+F S I ANT+ VQMPLP  T+R SFELEPGA GQ TD
Sbjct: 301 HVNTLIEEAGRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQRTD 360

Query: 361 FKEANKRLEWSLKKI 375
           FKE+NK LEW+LKK+
Sbjct: 361 FKESNKMLEWNLKKV 375


>AT4G24550.1 | Symbols:  | Clathrin adaptor complexes medium subunit
           family protein | chr4:12675873-12678526 FORWARD
           LENGTH=380
          Length = 380

 Score =  612 bits (1579), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 296/374 (79%), Positives = 325/374 (86%), Gaps = 1/374 (0%)

Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWEDGGLEEAPPVFNVDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYR EVPKGS E FFRKVKFW++ G  EAPP+FNVDGVNYFH
Sbjct: 2   MISQFFVLSQRGDNIVFRDYRAEVPKGSTETFFRKVKFWKEDGNAEAPPIFNVDGVNYFH 61

Query: 61  VKVVGLLFVATTRVNISPSFVFELLQRIARVVKDYLGILNEDSIRKNFVLVYELLDEVMD 120
           VKVVGL FVATTRVN+SPS V ELLQRIARV+KDYLG+LNEDS RKNFVLVYELLDEV+D
Sbjct: 62  VKVVGLYFVATTRVNVSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVID 121

Query: 121 FGYVQTTSTELLKSYVFNEPIVIDAARLSPLGPAAMFSQGTKRMPGIAVTKSVVATEPGG 180
           FGYVQTTSTE+LKSY+FNEPIV+  ARL P+ PAA+F+QG KRMPG AVTKSVVA +PGG
Sbjct: 122 FGYVQTTSTEVLKSYIFNEPIVVSPARLQPIDPAAIFTQGAKRMPGTAVTKSVVANDPGG 181

Query: 181 RRREEIFVDIIEKISLTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIXXXXX 240
           RRREEIFVDIIEKIS+TFSSSGYILTSEIDGTIQMKSYL+GNPEIRLALNEDL+I     
Sbjct: 182 RRREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLNIGRGGR 241

Query: 241 XXXXXXXXXXXXPVLLDDCNFHESVRLDSFDTDRTLSLVPPDGEFPVMNYRITQEFRPPF 300
                        V+LDDCNFHESVRLDSFD+DRTLSLVPPDGEFPVMNYR+TQEF+PPF
Sbjct: 242 SVYDYRSSSGSG-VILDDCNFHESVRLDSFDSDRTLSLVPPDGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGSLKAEVILKVNAQFASSITANTVKVQMPLPKCTTRVSFELEPGAVGQTTD 360
            +N LIEEAG LKAEVI+K+ A+F S I ANT+ VQMPLP  T+R SFELEPGA GQ TD
Sbjct: 301 HVNTLIEEAGRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQRTD 360

Query: 361 FKEANKRLEWSLKK 374
           FKE+NK LEW+LKK
Sbjct: 361 FKESNKMLEWNLKK 374


>AT1G60780.1 | Symbols: HAP13 | Clathrin adaptor complexes medium
           subunit family protein | chr1:22369289-22371885 REVERSE
           LENGTH=428
          Length = 428

 Score =  239 bits (610), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 144/435 (33%), Positives = 232/435 (53%), Gaps = 30/435 (6%)

Query: 3   SQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWEDGGLEEAPPVFNVDGVNYFHVK 62
           S  F+L  +G  +V+RDYRG+V    AE FF K+   ++G  +   PV   +GV Y  V+
Sbjct: 6   SALFLLDIKGRVLVWRDYRGDVSAAQAERFFTKL-IEKEGDSQSNDPVAYDNGVTYMFVQ 64

Query: 63  VVGLLFVATTRVNISPSFVFELLQRIARVVKDYLGILNEDSIRKNFVLVYELLDEVMDFG 122
              +  +  +R N + + +   L R+  V K Y   L E+S+R NFV+VYELLDE+MDFG
Sbjct: 65  HSNVYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFG 124

Query: 123 YVQTTSTELLKSYVFNEPIVIDAARLSPLGPAAMFSQGTKRMPGIAVTKSVVATEPGGR- 181
           Y Q T   +L  +     I  DA R+          + T+R P +AVT +V     G + 
Sbjct: 125 YPQYTEARILSEF-----IKTDAYRM----------EVTQR-PPMAVTNAVSWRSEGIQY 168

Query: 182 RREEIFVDIIEKISLTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIXXXXXX 241
           ++ E+F+D+IE +++  +S+G I+ S++ G ++M++YLTG PE +L LN+ + +      
Sbjct: 169 KKNEVFLDVIENVNILVNSNGQIVRSDVVGALKMRTYLTGMPECKLGLNDRVLLEAQGRA 228

Query: 242 XXXXXXXXXXXPVLLDDCNFHESVRLDSFDTDRTLSLVPPDGEFPVMNYRITQEFRPPFR 301
                       + L+D  FH+ VRL  F+ DRT+S +PPDG F +M YR++ + +P   
Sbjct: 229 TKGKA-------IDLEDIKFHQCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIW 281

Query: 302 INALIEEAGSLKAEVILKVNAQFASSITANTVKVQMPLPKCTTRVSFELEPGAVGQTTDF 361
           + A IE     + E+++K  +QF    TA  V++++P+P   +  +     G+     + 
Sbjct: 282 VEAQIESHSRSRVEMLIKARSQFKERSTATNVEIELPVPTDASNPTVRTSLGSASYAPE- 340

Query: 362 KEANKRLEWSLKKITGGSEHTLRAKLTFSQEIHGNITKE-SGPVSMTFTIPMYNTSQLQV 420
           K+A   L W +K   G  E+ LRA+           T E   P+ + F IP +  S +QV
Sbjct: 341 KDA---LVWKIKSFPGNKEYMLRAEFHLPSITAEEATPERKAPIRVKFEIPYFTVSGIQV 397

Query: 421 KYLQISKKSGTHRFP 435
           +YL+I +KSG    P
Sbjct: 398 RYLKIIEKSGYQALP 412


>AT1G10730.1 | Symbols:  | Clathrin adaptor complexes medium subunit
           family protein | chr1:3565463-3567779 FORWARD LENGTH=428
          Length = 428

 Score =  234 bits (596), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/435 (32%), Positives = 229/435 (52%), Gaps = 30/435 (6%)

Query: 3   SQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWEDGGLEEAPPVFNVDGVNYFHVK 62
           S  F+L  +G  +V+RDYRG+V    AE FF K+    +G  +   PV   +GV Y  V+
Sbjct: 6   SALFLLDIKGRVLVWRDYRGDVTAAQAERFFTKL-IETEGDSQSNDPVAYDNGVTYMFVQ 64

Query: 63  VVGLLFVATTRVNISPSFVFELLQRIARVVKDYLGILNEDSIRKNFVLVYELLDEVMDFG 122
              +  +  +R N + + +   L R+  V K Y   L E+S+R NFV+VYELLDE+MDFG
Sbjct: 65  HSNIYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFG 124

Query: 123 YVQTTSTELLKSYVFNEPIVIDAARLSPLGPAAMFSQGTKRMPGIAVTKSVVATEPGGR- 181
           Y Q T   +L  +     I  DA R+          + T+R P +AVT SV     G + 
Sbjct: 125 YPQFTEARILSEF-----IKTDAYRM----------EVTQR-PPMAVTNSVSWRSEGLKF 168

Query: 182 RREEIFVDIIEKISLTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIXXXXXX 241
           ++ E+F+D+IE +++  +S+G I+ S++ G ++M++YL+G PE +L LN+ + +      
Sbjct: 169 KKNEVFLDVIESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQGRA 228

Query: 242 XXXXXXXXXXXPVLLDDCNFHESVRLDSFDTDRTLSLVPPDGEFPVMNYRITQEFRPPFR 301
                       + L+D  FH+ VRL  F+ DRT+S +PPDG F +M YR++ + +P   
Sbjct: 229 IKGK-------AIDLEDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIW 281

Query: 302 INALIEEAGSLKAEVILKVNAQFASSITANTVKVQMPLPKCTTRVSFELEPGAVGQTTDF 361
           + A IE     + E+++K  +QF     A +V++++P+P            G+     + 
Sbjct: 282 VEAHIERHSRSRVEMLVKARSQFKDRSYATSVEIELPVPTDAYNPDVRTSLGSAAYAPE- 340

Query: 362 KEANKRLEWSLKKITGGSEHTLRAKLTFSQEIHGNITKE-SGPVSMTFTIPMYNTSQLQV 420
           K+A   L W ++   G  EHTL+A            T E   P+ + F IP +  S +QV
Sbjct: 341 KDA---LVWKIQYFYGNKEHTLKADFHLPSIAAEEATPERKAPIRVKFEIPKFIVSGIQV 397

Query: 421 KYLQISKKSGTHRFP 435
           +YL+I +KSG    P
Sbjct: 398 RYLKIIEKSGYQAHP 412


>AT5G46630.1 | Symbols:  | Clathrin adaptor complexes medium subunit
           family protein | chr5:18920580-18923252 FORWARD
           LENGTH=438
          Length = 438

 Score =  226 bits (576), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 137/435 (31%), Positives = 233/435 (53%), Gaps = 29/435 (6%)

Query: 3   SQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWEDGGLEEAPPVFNVDGVNYFHVK 62
           S  + L+ RGD ++ R YR +V     + F   +   ++ G     PV  + G ++ +++
Sbjct: 6   SAIYFLNLRGDVLINRTYRDDVGGNMVDAFRTHIMQTKELG---NCPVRQIGGCSFVYMR 62

Query: 63  V--VGLLFVATTRVNISPSFVFELLQRIARVVKDYLGILNEDSIRKNFVLVYELLDEVMD 120
           +  V ++ V ++  N++  F F +++ +A     + G  +ED+IR NFVL+YELLDE+MD
Sbjct: 63  ISNVYIVIVVSSNANVACGFKF-VVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMD 121

Query: 121 FGYVQTTSTELLKSYVFNEPIVIDAARLSPLGPAAMFSQGTKRMP----GIAVTKSVVAT 176
           FGY Q  S E+LK Y+  E            G  + FS   K  P     + VT +V   
Sbjct: 122 FGYPQNLSPEILKLYITQE------------GVRSPFSSKPKDKPVPNATLQVTGAVGWR 169

Query: 177 EPG-GRRREEIFVDIIEKISLTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSI 235
             G   ++ E+F+DI+E ++L  SS G +L  ++ G + MK +L+G P+++L LN+ + +
Sbjct: 170 REGLAYKKNEVFLDIVESVNLLMSSKGNVLRCDVTGKVLMKCFLSGMPDLKLGLNDKIGL 229

Query: 236 XXXXXXXXXXXXXXXXXPVLLDDCNFHESVRLDSFDTDRTLSLVPPDGEFPVMNYRITQE 295
                             + LDD  FH+ V L  F++++T+S VPPDGEF +M YRIT+ 
Sbjct: 230 EKESEMKSRPAKSGKT--IELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEG 287

Query: 296 FRPPFRINALIEEAGSLKAEVILKVNAQFASSITANTVKVQMPLPKCTTRVSFELEPGAV 355
              PFR+   I+E G  + EV +KV + F + + A  V V++P+PK T + +F++  G  
Sbjct: 288 VNLPFRVLPTIKELGRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTNFQVTTG-- 345

Query: 356 GQTTDFKEANKRLEWSLKKITGGSEHTLRAKLTFSQEIHGNITKESGPVSMTFTIPMYNT 415
                +  +   L W ++K  G +E TL A++     +    +    P+ M F +PM+  
Sbjct: 346 --RAKYNPSIDCLVWKIRKFPGQTESTLSAEIELISTMGEKKSWTRPPIQMEFQVPMFTA 403

Query: 416 SQLQVKYLQISKKSG 430
           S L+V++L++ +KSG
Sbjct: 404 SGLRVRFLKVWEKSG 418


>AT5G46630.2 | Symbols:  | Clathrin adaptor complexes medium subunit
           family protein | chr5:18920580-18923060 FORWARD
           LENGTH=441
          Length = 441

 Score =  221 bits (564), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 137/432 (31%), Positives = 228/432 (52%), Gaps = 33/432 (7%)

Query: 3   SQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWEDGGLEEAPPVFNVDGVNYFHVK 62
           S  + L+ RGD ++ R YR +V     + F   +   ++ G     PV  + G ++ +++
Sbjct: 6   SAIYFLNLRGDVLINRTYRDDVGGNMVDAFRTHIMQTKELG---NCPVRQIGGCSFVYMR 62

Query: 63  V--VGLLFVATTRVNISPSFVFELLQRIARVVKDYLGILNEDSIRKNFVLVYELLDEVMD 120
           +  V ++ V ++  N++  F F +++ +A     + G  +ED+IR NFVL+YELLDE+MD
Sbjct: 63  ISNVYIVIVVSSNANVACGFKF-VVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMD 121

Query: 121 FGYVQTTSTELLKSYVFNEPIVIDAARLSPLGPAAMFSQGTKRMPGIAVTKSVVATEPGG 180
           FGY Q  S E+LK Y+  E            G  + FS   K  P    T  V  T   G
Sbjct: 122 FGYPQNLSPEILKLYITQE------------GVRSPFSSKPKDKPVPNATLQV--TGAVG 167

Query: 181 RRRE-------EIFVDIIEKISLTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDL 233
            RRE       E+F+DI+E ++L  SS G +L  ++ G + MK +L+G P+++L LN+ +
Sbjct: 168 WRREGLAYKKNEVFLDIVESVNLLMSSKGNVLRCDVTGKVLMKCFLSGMPDLKLGLNDKI 227

Query: 234 SIXXXXXXXXXXXXXXXXXPVLLDDCNFHESVRLDSFDTDRTLSLVPPDGEFPVMNYRIT 293
            +                  + LDD  FH+ V L  F++++T+S VPPDGEF +M YRIT
Sbjct: 228 GLEKESEMKSRPAKSGKT--IELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRIT 285

Query: 294 QEFRPPFRINALIEEAGSLKAEVILKVNAQFASSITANTVKVQMPLPKCTTRVSFELEPG 353
           +    PFR+   I+E G  + EV +KV + F + + A  V V++P+PK T + +F++  G
Sbjct: 286 EGVNLPFRVLPTIKELGRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTNFQVTTG 345

Query: 354 AVGQTTDFKEANKRLEWSLKKITGGSEHTLRAKLTFSQEIHGNITKESGPVSMTFTIPMY 413
                  +  +   L W ++K  G +E TL A++     +    +    P+ M F +PM+
Sbjct: 346 ----RAKYNPSIDCLVWKIRKFPGQTESTLSAEIELISTMGEKKSWTRPPIQMEFQVPMF 401

Query: 414 NTSQLQVKYLQI 425
             S L+V++L++
Sbjct: 402 TASGLRVRFLKV 413


>AT1G56590.1 | Symbols: ZIP4 | Clathrin adaptor complexes medium
           subunit family protein | chr1:21202250-21204697 REVERSE
           LENGTH=415
          Length = 415

 Score =  142 bits (359), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 182/392 (46%), Gaps = 38/392 (9%)

Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWEDGGLEEAPPVFNVDGVNYFH 60
           M+   F++S  G+ ++ +   G     S   +F   ++   G   +A PV        F 
Sbjct: 1   MLQCIFLISDSGEVMLEKQLTGHRVDRSICAWFWD-QYISQGDSFKALPVIASPTHYLFQ 59

Query: 61  VKVVGLLFVATTRVNISPSFVFELLQRIARVVKDYLGILNEDSIRKNFVLVYELLDEVMD 120
           +   G+ F+A ++V + P    E L R+A V+ +YLG LNED I+ NF++VYELLDE++D
Sbjct: 60  IVRDGITFLACSQVEMPPLMAIEFLCRVADVLSEYLGGLNEDLIKDNFIIVYELLDEMID 119

Query: 121 FGYVQTTSTELLKSYVFNEPIVIDAARLSPLGPAAMFSQGTKRMPGIAVTKSVVATEPGG 180
            G+  TT   +LK  +   P  + +  LS +   A  S  +  +P  A   S V   P  
Sbjct: 120 NGFPLTTEPSILKEMI--APPNLVSKMLSVVTGNA--SNVSDTLPSGA--GSCVPWRPTD 173

Query: 181 RR--REEIFVDIIEKISLTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIXXX 238
            +    E++VD++E++    +  G ++  EI G +QM S LTG P++ L+          
Sbjct: 174 PKYSSNEVYVDLVEEMDAIVNRDGELVKCEIYGEVQMNSQLTGFPDLTLSFAN------- 226

Query: 239 XXXXXXXXXXXXXXPVLLDDCNFHESVRLDSFDTDRTLSLVPPDGEFPVMNYRITQEFRP 298
                         P +L+D  FH  VR   +++ + LS VPPDGEF +M+YR+ +    
Sbjct: 227 --------------PSILEDMRFHPCVRYRPWESHQVLSFVPPDGEFKLMSYRVKKLKNT 272

Query: 299 PFRINALI-EEAGSLKAEVILKVNAQFASSITANTVKVQMPLPKCTTRVSFELEPGAVGQ 357
           P  +   I  ++G+ +  V++ + +    +I + T+  Q  LP C +        G V  
Sbjct: 273 PVYVKPQITSDSGTCRISVLVGIRSDPGKTIESITLSFQ--LPHCVSSADLSSNHGTVTI 330

Query: 358 TTDFKEANKRLEWSLKKITGGSEHTLRAKLTF 389
                 +NK   W++ +I       L   L  
Sbjct: 331 L-----SNKTCTWTIGRIPKDKTPCLSGTLAL 357