Miyakogusa Predicted Gene
- Lj6g3v1618380.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1618380.1 tr|G7KBJ7|G7KBJ7_MEDTR Ubiquitin
carboxyl-terminal hydrolase OS=Medicago truncatula GN=MTR_5g066000
,71.55,0,seg,NULL; Cysteine proteinases,NULL; UCH_2_3,Peptidase C19,
ubiquitin carboxyl-terminal hydrolase 2;,CUFF.59686.1
(703 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 | ... 478 e-135
AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 | ... 436 e-122
AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 378 e-105
AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 375 e-104
AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 367 e-101
AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 | ... 365 e-101
AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 341 1e-93
AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 | ... 213 4e-55
AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 | ... 203 4e-52
AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific proteas... 143 4e-34
AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 | ... 140 3e-33
AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific proteas... 139 7e-33
AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 | ch... 133 3e-31
AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 | ... 132 8e-31
AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 | ... 99 1e-20
AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specifi... 96 1e-19
AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 87 3e-17
AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 87 3e-17
AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 87 3e-17
AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 87 3e-17
AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 87 3e-17
AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 81 3e-15
AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 81 3e-15
AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific proteas... 75 2e-13
AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 73 8e-13
AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 73 8e-13
AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 73 8e-13
AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 70 6e-12
AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 70 6e-12
AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific proteas... 69 9e-12
AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 | ch... 67 3e-11
AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific... 67 4e-11
AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 | ... 62 2e-09
AT3G21280.1 | Symbols: UBP7 | ubiquitin-specific protease 7 | ch... 59 2e-08
AT1G51710.2 | Symbols: UBP6 | ubiquitin-specific protease 6 | ch... 51 3e-06
AT1G51710.1 | Symbols: UBP6, ATUBP6 | ubiquitin-specific proteas... 51 3e-06
>AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 |
chr4:12679493-12684528 REVERSE LENGTH=1008
Length = 1008
Score = 478 bits (1229), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/374 (61%), Positives = 286/374 (76%), Gaps = 12/374 (3%)
Query: 152 KNGLKISVQKVGDQFRGSSLSKNIPQAVGSDIAGKYSDKGLFPYNLFVKLYNWNRVEFQP 211
++GLK SV KV DQ+ P++ +++AG++ KGLFPY +F KLY + ++EFQP
Sbjct: 491 RSGLKASVLKVVDQW-------TRPKS-ENEMAGRHGHKGLFPYEVFAKLYTY-KIEFQP 541
Query: 212 FGLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSCTNRKWCFVCDLESLILKAKDTK 271
GLIN GNSC+AN V QCL FTPPLT Y LQ+ HS++CT ++ CF C E L++KAK+ K
Sbjct: 542 CGLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRACTKKEQCFTCGFEKLVVKAKEEK 601
Query: 272 SPLSPKDILSQLQKNGSQLGNGREEDAHEFLRHVIETMQSVCLMESGPNMPDSLK-EETN 330
SPLSP +LSQLQ G LGNG+EEDAHEFLR V++TMQSVC+ S +M S K E+T
Sbjct: 602 SPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDMTKSSKLEDTT 661
Query: 331 LTGLTFGGYLRSKIKCMKCGGKSERQERMLDLTVEIEGEIATLEEALRQFTSIETLDGEN 390
L GLTFGGYLRSKIKCMKC KSE +E+M+DLTVEI+G+I+TL++ALR+FT E LDGEN
Sbjct: 662 LIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDALRRFTRTEILDGEN 721
Query: 391 KYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFKSGKFGKLNKSIRFPEILDLAPFMSGT 450
KY C CKSY++AKKK+ ++E PNVLTI LKRF++GKFGKLNK IRFPE LDLAP++SG
Sbjct: 722 KYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQAGKFGKLNKLIRFPETLDLAPYVSGG 781
Query: 451 SDLA-IYRLYGVVVHLDTMNAAFSGHYVCYVKNFQNRWFKVDDSXXXXXXXXXXXXKGAY 509
S+ + Y+LYGV+VHLD MNAAFSGHYVCY++N QN+W+K DDS KGAY
Sbjct: 782 SEKSHDYKLYGVIVHLDVMNAAFSGHYVCYIRN-QNKWYKADDSTVVTSDVERILTKGAY 840
Query: 510 MLLYARCSPRAPRL 523
ML YARC+P PRL
Sbjct: 841 MLFYARCTPTPPRL 854
>AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 |
chr5:26157863-26161096 FORWARD LENGTH=731
Length = 731
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/374 (59%), Positives = 261/374 (69%), Gaps = 12/374 (3%)
Query: 148 SPNSKNGLKISVQKVGDQFRGSSLSKNIPQAVGSDIAGKYSDKGLFPYNLFVKLYNWNRV 207
S S +GLK SVQKV FR SK + D F Y LFVKLY +RV
Sbjct: 273 SQASSSGLKTSVQKVVQHFRPPQSSKKSQPSSSIDEMS-------FSYELFVKLY-CDRV 324
Query: 208 EFQPFGLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSCTNRKWCFVCDLESLILKA 267
E QPFGL+N GNSCYANAVLQCLAFT PL +YL++ LHSK+C + WCFVC+ E LILKA
Sbjct: 325 ELQPFGLVNLGNSCYANAVLQCLAFTRPLISYLIRGLHSKTCRKKSWCFVCEFEHLILKA 384
Query: 268 KDTKSPLSPKDILSQLQKNGSQLGNGREEDAHEFLRHVIETMQSVCLMESGPNMPDSLKE 327
+ +SPLSP ILS+LQK G LG G+EEDAHEFLR ++TMQSV L E+ P E
Sbjct: 385 RGGESPLSPIKILSKLQKIGKHLGPGKEEDAHEFLRCAVDTMQSVFLKEAPAAGP--FAE 442
Query: 328 ETNLTGLTFGGYLRSKIKCMKCGGKSERQERMLDLTVEIEGEIATLEEALRQFTSIETLD 387
ET L GLTFGGYL SKIKCM C KSER E M+DLTVEI+G+I +LEEAL QFT+ E LD
Sbjct: 443 ETTLVGLTFGGYLHSKIKCMACLHKSERPELMMDLTVEIDGDIGSLEEALAQFTAYEVLD 502
Query: 388 GENKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFKSGKFGKLNKSIRFPEILDLAPFM 447
GEN+Y C RCKSYQKAKKK+ + E PN+LT+ LKRF+S FGKL+K I FPE+LD++P+M
Sbjct: 503 GENRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRFQSDNFGKLSKPIHFPELLDISPYM 562
Query: 448 SGTS--DLAIYRLYGVVVHLDTMNAAFSGHYVCYVKNFQNRWFKVDDSXXXXXXXXXXXX 505
S + D +Y LY VVVHLD M+ FSGHYVCY+K WFK+DDS
Sbjct: 563 SDPNHGDHPVYSLYAVVVHLDAMSTLFSGHYVCYIKTLDGDWFKIDDSNVFPVQLETVLL 622
Query: 506 KGAYMLLYARCSPR 519
+GAYMLLYAR SPR
Sbjct: 623 EGAYMLLYARDSPR 636
>AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=924
Length = 924
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/417 (44%), Positives = 264/417 (63%), Gaps = 20/417 (4%)
Query: 126 STKFGNNGIQSGTATPSQI-----ASCSPNSKNGLKISVQK--------VGDQFRGSSLS 172
+T++ +NG ++ T + I SC+ SK G +V K + ++ G S +
Sbjct: 334 NTQYPSNGTRTATLPRTGINKSGEQSCTETSKKGQVAAVSKTVRSKDTGISEESNGISST 393
Query: 173 KNIPQAVGSDIAGKYSD-----KGLFPYNLFVKLYNWNRVEFQPFGLINCGNSCYANAVL 227
I + +G + K+ D K LFPY F+K + + P GL+NCGNSCYANAVL
Sbjct: 394 MGIMKMMGLRNSTKHDDRYKNLKMLFPYEEFLKFFQCEVFDLSPRGLVNCGNSCYANAVL 453
Query: 228 QCLAFTPPLTAYLLQRLHSKSCTNRKWCFVCDLESLILKAKDTKSPLSPKDILSQLQKNG 287
Q L T PL AYLL+R HS+SC+ + WC +C+LE ++ +++ PLS ILS ++
Sbjct: 454 QSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHVMMLRESGGPLSASRILSHMRSIN 513
Query: 288 SQLGNGREEDAHEFLRHVIETMQSVCLME-SGPNMPDSLKEETNLTGLTFGGYLRSKIKC 346
Q+G+G +EDAHEFLR ++ +MQS+CL G D +ET L FGG LRSK+KC
Sbjct: 514 CQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQETTLVQHMFGGRLRSKVKC 573
Query: 347 MKCGGKSERQERMLDLTVEIEGEIATLEEALRQFTSIETLDGENKYHCVRCKSYQKAKKK 406
++C +SER E ++DLT+EI G + +L++AL QFT E LDGEN Y C RC Y +A+K+
Sbjct: 574 LRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKE 633
Query: 407 MTVSEAPNVLTITLKRFKSGKFGKLNKSIRFPEILDLAPFMSGTSDL-AIYRLYGVVVHL 465
+++ EAPN+LTI LKRF+ G++GK+NK I FPE+LD+ PFM+ T D+ +Y LY V+VHL
Sbjct: 634 LSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFMTRTGDVPPLYMLYAVIVHL 693
Query: 466 DTMNAAFSGHYVCYVKNFQNRWFKVDDSXXXXXXXXXXXXKGAYMLLYARCSPRAPR 522
DT+NA+FSGHY+ YVK+ + W+++DDS +GAYML Y R PR R
Sbjct: 694 DTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMSEGAYMLFYMRSYPRPQR 750
>AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=928
Length = 928
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/421 (43%), Positives = 264/421 (62%), Gaps = 24/421 (5%)
Query: 126 STKFGNNGIQSGTATPSQI-----ASCSPNSKNGLKISVQK--------VGDQFRGSSLS 172
+T++ +NG ++ T + I SC+ SK G +V K + ++ G S +
Sbjct: 334 NTQYPSNGTRTATLPRTGINKSGEQSCTETSKKGQVAAVSKTVRSKDTGISEESNGISST 393
Query: 173 KNIPQAVGSDIAGKYSDK---------GLFPYNLFVKLYNWNRVEFQPFGLINCGNSCYA 223
I + +G + K+ D+ LFPY F+K + + P GL+NCGNSCYA
Sbjct: 394 MGIMKMMGLRNSTKHDDRYKNLKVSSLMLFPYEEFLKFFQCEVFDLSPRGLVNCGNSCYA 453
Query: 224 NAVLQCLAFTPPLTAYLLQRLHSKSCTNRKWCFVCDLESLILKAKDTKSPLSPKDILSQL 283
NAVLQ L T PL AYLL+R HS+SC+ + WC +C+LE ++ +++ PLS ILS +
Sbjct: 454 NAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHVMMLRESGGPLSASRILSHM 513
Query: 284 QKNGSQLGNGREEDAHEFLRHVIETMQSVCLME-SGPNMPDSLKEETNLTGLTFGGYLRS 342
+ Q+G+G +EDAHEFLR ++ +MQS+CL G D +ET L FGG LRS
Sbjct: 514 RSINCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQETTLVQHMFGGRLRS 573
Query: 343 KIKCMKCGGKSERQERMLDLTVEIEGEIATLEEALRQFTSIETLDGENKYHCVRCKSYQK 402
K+KC++C +SER E ++DLT+EI G + +L++AL QFT E LDGEN Y C RC Y +
Sbjct: 574 KVKCLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDLDGENMYRCSRCAGYVR 633
Query: 403 AKKKMTVSEAPNVLTITLKRFKSGKFGKLNKSIRFPEILDLAPFMSGTSDL-AIYRLYGV 461
A+K++++ EAPN+LTI LKRF+ G++GK+NK I FPE+LD+ PFM+ T D+ +Y LY V
Sbjct: 634 ARKELSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFMTRTGDVPPLYMLYAV 693
Query: 462 VVHLDTMNAAFSGHYVCYVKNFQNRWFKVDDSXXXXXXXXXXXXKGAYMLLYARCSPRAP 521
+VHLDT+NA+FSGHY+ YVK+ + W+++DDS +GAYML Y R PR
Sbjct: 694 IVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMSEGAYMLFYMRSYPRPQ 753
Query: 522 R 522
R
Sbjct: 754 R 754
>AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10479341 REVERSE LENGTH=672
Length = 672
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/351 (49%), Positives = 230/351 (65%), Gaps = 3/351 (0%)
Query: 175 IPQAVGSDIAGKYSDKGLFPYNLFVKLYNWNRVEFQPFGLINCGNSCYANAVLQCLAFTP 234
+PQ S K +D LFPY FV+ YNW+R P GL NCGNSC+AN VLQCL++T
Sbjct: 138 VPQQSQSKATLKPTDV-LFPYESFVRYYNWDRPIMAPCGLTNCGNSCFANVVLQCLSWTR 196
Query: 235 PLTAYLLQRLHSKSCTNRKWCFVCDLESLILKAKDTKSPLSPKDILSQLQKNGSQLGNGR 294
PL AYLL+R H + C WCF+C+ E+ + +A ++ P SP +I+S+L G LG GR
Sbjct: 197 PLVAYLLERGHKRECRRNDWCFLCEFENHLDRANYSRFPFSPMNIISRLPNIGGNLGYGR 256
Query: 295 EEDAHEFLRHVIETMQSVCLME-SGPNMPDSLKEETNLTGLTFGGYLRSKIKCMKCGGKS 353
+EDAHE +R I+ MQSVCL E G + +ET L FGG L+S+++C C S
Sbjct: 257 QEDAHELMRFAIDMMQSVCLDEFGGEKVVPPRAQETTLIQYIFGGLLQSQVQCTACSNVS 316
Query: 354 ERQERMLDLTVEIEGEIATLEEALRQFTSIETLDGENKYHCVRCKSYQKAKKKMTVSEAP 413
++ E M+DLTVEI G+ +LEE L QFT+ E L G+N Y C RC Y KA K++++ AP
Sbjct: 317 DQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKCDRCDDYVKACKRLSIRCAP 376
Query: 414 NVLTITLKRFKSGKFGKLNKSIRFPEILDLAPFMSGTSDLA-IYRLYGVVVHLDTMNAAF 472
N+LTI LKRF+ G+FGKLNK I FPE DL P+MSG + + +Y+LY V+VHLD +NA+F
Sbjct: 377 NILTIALKRFQGGRFGKLNKRISFPETFDLGPYMSGGGEGSDVYKLYAVIVHLDMLNASF 436
Query: 473 SGHYVCYVKNFQNRWFKVDDSXXXXXXXXXXXXKGAYMLLYARCSPRAPRL 523
GHY+CYVK+F+ W+++DDS + AYMLLY+R PR L
Sbjct: 437 FGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAYMLLYSRVQPRPSNL 487
>AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 |
chr4:15336007-15339506 REVERSE LENGTH=631
Length = 631
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/426 (42%), Positives = 255/426 (59%), Gaps = 23/426 (5%)
Query: 144 IASCSPNSKNGLKISVQKVGDQF---------RGSSLSKNIPQAVGSDIAGKYSDKGLFP 194
I + +P++KNGL+ GD RG + S P+ V LFP
Sbjct: 103 ITTLTPSAKNGLRFRASPFGDSSASSIALISERGQNKSSLKPREV------------LFP 150
Query: 195 YNLFVKLYNWNRVEFQPFGLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSCTNRKW 254
Y FV+ +NW+ E P GL+NCGNSC+AN +LQCL++T PL AYLL++ H + C W
Sbjct: 151 YEEFVEYFNWDNPELAPCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKRECMRNDW 210
Query: 255 CFVCDLESLILKAKDTKSPLSPKDILSQLQKNGSQLGNGREEDAHEFLRHVIETMQSVCL 314
CF+C+ ++ + +A ++ P SP +I+S+L G LG GR+EDAHEF+R+ I+ MQSVCL
Sbjct: 211 CFLCEFQTHVERASQSRFPFSPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCL 270
Query: 315 ME-SGPNMPDSLKEETNLTGLTFGGYLRSKIKCMKCGGKSERQERMLDLTVEIEGEIATL 373
E G + +ET L FGG L+S+++C C S++ E M+DL VE+ G+ +L
Sbjct: 271 DEFGGEKIVPPRSQETTLIQYIFGGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAGSL 330
Query: 374 EEALRQFTSIETLDGENKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFKSGKFGKLNK 433
EE L QFT+ E L G+N Y C RC Y KA K++T+ APN+LTI LKR++ G++GKLNK
Sbjct: 331 EECLDQFTAEEWLHGDNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRYQGGRYGKLNK 390
Query: 434 SIRFPEILDLAPFMSGTSDLA-IYRLYGVVVHLDTMNAAFSGHYVCYVKNFQNRWFKVDD 492
I FPE LDL P+MS D + +Y+LY V+VHLD +NA+F GHY+CY+K+F W+++DD
Sbjct: 391 RISFPETLDLNPYMSEGGDGSDVYKLYAVIVHLDMLNASFFGHYICYIKDFCGNWYRIDD 450
Query: 493 SXXXXXXXXXXXXKGAYMLLYARCSPRAPRLIRNMIVSSDPKSKAHAKTVAMKARNVSSD 552
S + AYMLLY+R R+ V + K+ +K SS
Sbjct: 451 SEIESVELEDVLSQRAYMLLYSRIQARSSSSCLRSEVKDEKKTDTLDTESCVKELVESSM 510
Query: 553 SGAAES 558
GA ES
Sbjct: 511 VGAIES 516
>AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10478388 REVERSE LENGTH=502
Length = 502
Score = 341 bits (875), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 157/315 (49%), Positives = 211/315 (66%), Gaps = 2/315 (0%)
Query: 211 PFGLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSCTNRKWCFVCDLESLILKAKDT 270
P GL NCGNSC+AN VLQCL++T PL AYLL+R H + C WCF+C+ E+ + +A +
Sbjct: 3 PCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFLCEFENHLDRANYS 62
Query: 271 KSPLSPKDILSQLQKNGSQLGNGREEDAHEFLRHVIETMQSVCLME-SGPNMPDSLKEET 329
+ P SP +I+S+L G LG GR+EDAHE +R I+ MQSVCL E G + +ET
Sbjct: 63 RFPFSPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPRAQET 122
Query: 330 NLTGLTFGGYLRSKIKCMKCGGKSERQERMLDLTVEIEGEIATLEEALRQFTSIETLDGE 389
L FGG L+S+++C C S++ E M+DLTVEI G+ +LEE L QFT+ E L G+
Sbjct: 123 TLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGD 182
Query: 390 NKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFKSGKFGKLNKSIRFPEILDLAPFMSG 449
N Y C RC Y KA K++++ APN+LTI LKRF+ G+FGKLNK I FPE DL P+MSG
Sbjct: 183 NLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQGGRFGKLNKRISFPETFDLGPYMSG 242
Query: 450 TSDLA-IYRLYGVVVHLDTMNAAFSGHYVCYVKNFQNRWFKVDDSXXXXXXXXXXXXKGA 508
+ + +Y+LY V+VHLD +NA+F GHY+CYVK+F+ W+++DDS + A
Sbjct: 243 GGEGSDVYKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRA 302
Query: 509 YMLLYARCSPRAPRL 523
YMLLY+R PR L
Sbjct: 303 YMLLYSRVQPRPSNL 317
>AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 |
chr5:23470218-23473997 REVERSE LENGTH=859
Length = 859
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 177/306 (57%), Gaps = 7/306 (2%)
Query: 213 GLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSCTNRKWCFVCDLESLILKAKDTKS 272
GL N GN+C+ N+VLQCL +T PL A L H K C +C +C ++ + A+
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYCHVAGFCALCAIQKHVRTARQANG 167
Query: 273 P-LSPKDILSQLQKNGSQLGNGREEDAHEFLRHVIETMQSVCLMESGPNMPDSLKEETNL 331
L+PKD++S L+ N R+EDAHE++ +++E M C + SG S +L
Sbjct: 168 RILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHK-CSLPSGVPSESSDAYRRSL 226
Query: 332 TGLTFGGYLRSKIKCMKCGGKSERQERMLDLTVEIEGEIATLEEALRQFTSIETLD-GEN 390
FGG LRS++KC +C S + + LDL+++I + +L+ AL +FT++E LD G
Sbjct: 227 VHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDI-SKADSLQRALSRFTAVELLDNGAK 285
Query: 391 KYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFKSGKFGKLNKSIRFPEILDLAPFMSGT 450
Y C RCK KAKK++TVS+AP VLT+ LKRF++ + K+++ + F +D+ PF+SG
Sbjct: 286 VYQCERCKQKVKAKKQLTVSKAPYVLTVHLKRFEAHRSEKIDRKVDFTSAIDMKPFVSGP 345
Query: 451 SDLAI-YRLYGVVVHLDTMNAAFSGHYVCYVKNFQNRWFKVDDSXXXXXXXXXXXXKGAY 509
+ + Y LYGV+VH ++ SGHY C+V+ W+ +DD+ + AY
Sbjct: 346 HEGNLKYTLYGVLVHYG--RSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQKAY 403
Query: 510 MLLYAR 515
ML Y R
Sbjct: 404 MLFYVR 409
>AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 |
chr3:4811953-4815210 REVERSE LENGTH=661
Length = 661
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 123/347 (35%), Positives = 192/347 (55%), Gaps = 26/347 (7%)
Query: 201 LYNWNRVEFQPFGLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSC------TNRKW 254
L + R P GL N GN+CY N+VLQCL FTPPL + L HS C ++
Sbjct: 13 LLSQKRRNGPPLGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRD 72
Query: 255 CFVCDLESLILKAKDTK-SPLSPKDILSQLQKNGSQLGNGREEDAHEFLRHVIETMQSVC 313
C C +E I ++ + +P I S L+ GR+EDAHEFLR+VI+ +
Sbjct: 73 CPFCIVEKRIARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTS 132
Query: 314 L----MESGPNMP---DSLKEETNLTGLTFGGYLRSKIKCMKCGGKSERQERMLDLTVEI 366
L + N P +S+ +E FGG L+S++KC+ CG +S + + ++D+++EI
Sbjct: 133 LRLKKLRYNGNEPFNGNSVVKEI------FGGALQSQVKCLSCGAESNKADEIMDISLEI 186
Query: 367 EGEIATLEEALRQFTSIETLDGENKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFKSG 426
+ ++++E+L++F E LDG NKY C C+ A+K+M++ +APN+L I LKRF
Sbjct: 187 L-QSSSVKESLQKFFQSEILDGNNKYRCESCEKLVTARKQMSILQAPNILVIQLKRFGGI 245
Query: 427 KFGKLNKSIRFPEILDLAPFMSGTSD--LAIYRLYGVVVHLDTMNAAFSGHYVCYVKNFQ 484
GK++K+I F EIL L+ FMS S Y+L+G++VH + + SGHY YVK+
Sbjct: 246 FGGKIDKAISFGEILVLSNFMSKASKDPQPEYKLFGIIVH--SGFSPESGHYYAYVKDSL 303
Query: 485 NRWFKVDDSXXXXXXXXXXXXKGAYMLLYARCSPRAPRLIRNMIVSS 531
RW+ +DS + AY+L ++R + R P + ++ S+
Sbjct: 304 GRWYCCNDSFVSLSTLQEVLSEKAYILFFSRSNQR-PASAKTLVTSN 349
>AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific protease 4
| chr2:9476733-9478825 REVERSE LENGTH=365
Length = 365
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 153/309 (49%), Gaps = 33/309 (10%)
Query: 212 FGLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSCTNRKWCFVC--DLESLILKAKD 269
FG N GN+CY N+VLQ L F P LL+ + + C DL S I K
Sbjct: 23 FGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKADAEENLLTCLADLFSQISSQKK 82
Query: 270 TKSPLSPKDILSQLQKNGSQLGNGREEDAHEFLRHVIETMQSVCLMESGPNMPDS----- 324
++PK + +L+K + +DAHEFL +++ + + E+ D+
Sbjct: 83 KTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILEKETQATKADNETSSS 142
Query: 325 ---------------LKEETNLTGL--TFGGYLRSKIKCMKCGGKSERQERMLDLTVEIE 367
+ +E +T + F G L ++ +C++C + R E LDL+++IE
Sbjct: 143 PEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETVTARDETFLDLSLDIE 202
Query: 368 GEIATLEEALRQFTSIETLDGENKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFKS-- 425
+++ L+ F+S ETL E+K+ C +C S Q+A+K+M + + P++L I LKRFK
Sbjct: 203 QN-SSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYME 261
Query: 426 --GKFGKLNKSIRFPEILDLAPFMSGTSDLAIYRLYGVVVHLDTMNAAFSGHYVCYVKNF 483
G++ KL+ + FP L L+ + D+ Y L+ VVVH+ + GHYV VK+
Sbjct: 262 QLGRYKKLSYRVVFPLELKLSNTVDEYVDIE-YSLFAVVVHVGS--GPNHGHYVSLVKS- 317
Query: 484 QNRWFKVDD 492
N W DD
Sbjct: 318 HNHWLFFDD 326
>AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 |
chr5:18965410-18968492 REVERSE LENGTH=732
Length = 732
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 144/311 (46%), Gaps = 14/311 (4%)
Query: 213 GLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSCT--NRKWCFVCDLESLI-LKAKD 269
GL N GN+C+ +VLQC T PL L ++ C N K+C + L I L +
Sbjct: 164 GLYNSGNTCFIASVLQCFTHTVPLIDSLRSFMYGNPCNCGNEKFCVMQALRDHIELALRS 223
Query: 270 TKSPLSPKDILSQLQKNGSQLGNGREEDAHEFLRHVIETMQSVCLMESGPNMPDSLKEET 329
+ ++ L S +EDAHEFL+ ++ ++ CL + ++
Sbjct: 224 SGYGINIDRFRDNLTYFSSDFMINHQEDAHEFLQSFLDKLERCCLDPKN-QLGSVSSQDL 282
Query: 330 NLTGLTFGGYLRSKIKCMKCGGKSERQERMLDLTVEIEGEIATLEEALRQFTSIETLDGE 389
N+ FGG L S + C C S E L ++EIE ++ TL +AL FT +E L E
Sbjct: 283 NIVDNVFGGGLMSTLCCCNCNSVSNTFEPSLGWSLEIE-DVNTLWKALESFTCVEKL--E 339
Query: 390 NKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFKSG--KFGKLNKSIRFPEILDLAPFM 447
++ C CK +K++ + P V T LKRF + K+ I FP LDL+PFM
Sbjct: 340 DQLTCDNCKEKVTKEKQLRFDKLPPVATFHLKRFTNDGVTMEKIFDHIEFPLELDLSPFM 399
Query: 448 SGTSDLAI---YRLYGVVVHLDTMNAAFSGHYVCYVKNFQNRWFKVDDSXXXXXXXXXXX 504
S D + Y LY V H+ + A F GHY YV++ W DDS
Sbjct: 400 SSNHDPEVSTRYHLYAFVEHIG-IRATF-GHYSSYVRSAPETWHNFDDSKVTRISEERVL 457
Query: 505 XKGAYMLLYAR 515
+ AY+L YAR
Sbjct: 458 SRPAYILFYAR 468
>AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific protease 3
| chr4:18511858-18514139 REVERSE LENGTH=371
Length = 371
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 158/315 (50%), Gaps = 40/315 (12%)
Query: 212 FGLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSCT-----NRKWCFVCDLESLILK 266
FG N GN+CY N+VLQ L F P LL+ S N C + DL S I
Sbjct: 23 FGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLMTC-LADLFSQISS 81
Query: 267 AKDTKSPLSPKDILSQLQKNGSQLGNGREEDAHEFLRHVIETMQSVCLMES--------- 317
K ++PK + +L+K + +DAHEFL +++ + + E+
Sbjct: 82 QKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNEVVDILEKEAKATKTEHET 141
Query: 318 -----------GPNMPDS---LKEETNLTGL--TFGGYLRSKIKCMKCGGKSERQERMLD 361
G +P + + +E +T + F G L ++ +C++C + R E LD
Sbjct: 142 SSSSSPEKIANGLKVPQANGVVHKEPIVTWVHNIFQGILTNETRCLRCETVTARDETFLD 201
Query: 362 LTVEIEGEIATLEEALRQFTSIETLDGENKYHCVRCKSYQKAKKKMTVSEAPNVLTITLK 421
L+++IE + +++ L+ F+S ETL E+K+ C +C S Q+A+K+M + + P++L I LK
Sbjct: 202 LSLDIE-QNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLK 260
Query: 422 RFKS----GKFGKLNKSIRFPEILDLAPFMSGTSDLAIYRLYGVVVHLDTMNAAFSGHYV 477
RFK G++ KL+ + FP L L+ + +D+ Y L+ VVVH+ + GHYV
Sbjct: 261 RFKYIEQLGRYKKLSYRVVFPLELKLSNTVEPYADVE-YSLFAVVVHVGS--GPNHGHYV 317
Query: 478 CYVKNFQNRWFKVDD 492
VK+ N W DD
Sbjct: 318 SLVKS-HNHWLFFDD 331
>AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 |
chr2:9476733-9478825 REVERSE LENGTH=379
Length = 379
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 153/323 (47%), Gaps = 47/323 (14%)
Query: 212 FGLINCGNSCYANAVLQ--------------CLAFTPPLTAYLLQRLHSKSCTNRKWCFV 257
FG N GN+CY N+VLQ L F P LL+ + +
Sbjct: 23 FGFENFGNTCYCNSVLQDWVVDLRSVLHSMFALYFCAPFREQLLEHYANNKADAEENLLT 82
Query: 258 C--DLESLILKAKDTKSPLSPKDILSQLQKNGSQLGNGREEDAHEFLRHVIETMQSVCLM 315
C DL S I K ++PK + +L+K + +DAHEFL +++ + +
Sbjct: 83 CLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILEK 142
Query: 316 ESGPNMPDS--------------------LKEETNLTGL--TFGGYLRSKIKCMKCGGKS 353
E+ D+ + +E +T + F G L ++ +C++C +
Sbjct: 143 ETQATKADNETSSSPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETVT 202
Query: 354 ERQERMLDLTVEIEGEIATLEEALRQFTSIETLDGENKYHCVRCKSYQKAKKKMTVSEAP 413
R E LDL+++IE +++ L+ F+S ETL E+K+ C +C S Q+A+K+M + + P
Sbjct: 203 ARDETFLDLSLDIEQN-SSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPP 261
Query: 414 NVLTITLKRFKS----GKFGKLNKSIRFPEILDLAPFMSGTSDLAIYRLYGVVVHLDTMN 469
++L I LKRFK G++ KL+ + FP L L+ + D+ Y L+ VVVH+ +
Sbjct: 262 HILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVDEYVDIE-YSLFAVVVHVGS-- 318
Query: 470 AAFSGHYVCYVKNFQNRWFKVDD 492
GHYV VK+ N W DD
Sbjct: 319 GPNHGHYVSLVKS-HNHWLFFDD 340
>AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 |
chr4:9939914-9942698 FORWARD LENGTH=695
Length = 695
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 160/358 (44%), Gaps = 28/358 (7%)
Query: 213 GLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSCT--NRKWCFVCDLESLILKA-KD 269
GL N GNSC+ N+V QC T PL LL + C N +C + + I A +
Sbjct: 177 GLWNLGNSCFLNSVFQCFTHTVPLIESLLSFRYEVPCHCGNEFFCVIRAIRYHIEAALRP 236
Query: 270 TKSPLSPKDILSQLQKNGSQLGNGREEDAHEFLRHVIETMQSVCLMESGPNMPDSLKEET 329
+ P++P L ++EDAHEFL+ +E ++ +C + D ++
Sbjct: 237 ERCPIAPYFFFDNLNYFSPDFQRYQQEDAHEFLQAFLEKLE-ICGSDRTSFRGDITSQD- 294
Query: 330 NLTGLTFGGYLRSKIKCMKCGGKSERQERMLDLTVEIEGEIATLEEALRQFTSIETLDGE 389
F G L S ++C C SE E+ + L++EIE ++ TL AL FT +E LD
Sbjct: 295 -----VFSGRLISGLRCCNCDYVSETYEKSVGLSLEIE-DVDTLGSALESFTRVEKLD-- 346
Query: 390 NKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFKSGKF--GKLNKSIRFPEILDLAPFM 447
+ C C +K++ + + P V T LKRFK+ K+ K ++ P +DL P+M
Sbjct: 347 EQLTCDNCNEKVSKEKQLLLDKLPLVATFHLKRFKNNGLYMEKIYKHVKIPLEIDLQPYM 406
Query: 448 SGTSDLAI---YRLYGVVVHLDTMNAAFSGHYVCYVKNFQNRWFKVDDSXXXXXXXXXXX 504
+ + Y LY +V H A GHY YV++ W DDS
Sbjct: 407 RNIQENEVSTKYHLYALVEHFGYSVAY--GHYSSYVRSAPKIWHHFDDSKVTRIDEDMVL 464
Query: 505 XKGAYMLLYARCSPR--------APRLIRNMIVSSDPKSKAHAKTVAMKARNVSSDSG 554
+ +Y+L YAR R L+ +++S PKS + T +S ++G
Sbjct: 465 SQDSYILFYAREGTRWFSSVYEEMQPLVEASLLNSSPKSVLDSSTNGECLSEISYENG 522
>AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 |
chr5:3410638-3412559 FORWARD LENGTH=557
Length = 557
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 158/365 (43%), Gaps = 74/365 (20%)
Query: 213 GLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSCTNRK----WCFVCDLESLILKAK 268
GL N G++C+ NAVLQ L PPL + L H++ R+ C CDL+ +I A
Sbjct: 178 GLNNLGSTCFMNAVLQALVHAPPLRNFWLSGQHNRDLCPRRTMGLLCLPCDLD-VIFSAM 236
Query: 269 DT--KSPLSPKDILSQLQKNGSQLGNGREEDAHEFLRHVIETM-----QSVCLMESGPNM 321
+ ++P SP +L ++ + L ++D+HEF +++ + +S CL +
Sbjct: 237 FSGDRTPYSPAHLLYSWWQHSTNLATYEQQDSHEFFISLLDRIHENEGKSKCLYQDN--- 293
Query: 322 PDSLKEETNLTGLTFGGYLRSKIKCMKCGGKSERQERMLDLTVEIE-------------- 367
+E +T F G LRS + C CG S + +D+++ ++
Sbjct: 294 ----EECQCITHKAFSGLLRSDVTCTTCGSTSTTYDPFIDISLTLDSMNGFSPADCRKNR 349
Query: 368 --------GEIATLEEALRQFTSIETLDGENKYHCVRCKSYQKAKKKMTVSEAPNVLTIT 419
+ TL L FT E L + K +C C +++ K+M++ P +L +
Sbjct: 350 YSGGPSVNAIMPTLSGCLDFFTRSEKLGPDQKLNCQSCGEKRESSKQMSIRRLPLLLCLH 409
Query: 420 LKRFKSGKFGKLNKSI----RFPEILDLAPFMS------------------GTSD----- 452
+KRF+ K ++ I ++P L+++P++S G D
Sbjct: 410 VKRFEHSLTRKTSRKIDSYLQYPFRLNMSPYLSSSIIGKRFGNRIFAFDGEGEYDSSSSS 469
Query: 453 --LAIYRLYGVVVHLDTMNAAFSGHYVCYVKNFQNRWFKVDDSXXXXXXXXXXXXKGAYM 510
A + ++ VV H + SGHYV Y++ + W++ DD+ YM
Sbjct: 470 SPSAEFEIFAVVTHKGMLE---SGHYVTYLR-LKGLWYRCDDAWINEVEEEVVRGCECYM 525
Query: 511 LLYAR 515
L YA+
Sbjct: 526 LFYAQ 530
>AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specific
protease 26 | chr3:18380942-18386662 REVERSE LENGTH=1067
Length = 1067
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 145/298 (48%), Gaps = 35/298 (11%)
Query: 208 EFQPFGLINCGNSCYANAVLQCL----AFTPPLTAYLLQRLHSKSCTNRKWCFVCDLESL 263
E P GL N G +CYAN++LQCL AF + + + L ++ + L
Sbjct: 102 ESTPAGLTNLGATCYANSILQCLYMNTAFREGVFSVEVHVLKQNPVLDQ-------IARL 154
Query: 264 ILKAKDTKSPLSPKDILSQLQKNGSQLGNGREEDAHEFLRHVIETMQSVCLMESGPNMPD 323
+ ++ D + +L NG ++D HEFL ++ ++ L+ SG
Sbjct: 155 FAQLHASQKSFVDSDAFVKTL----ELDNGVQQDTHEFLTLLLSLLERC-LLHSG----- 204
Query: 324 SLKEETNLTGLTFGGYLRSKIKCMKCGGKSERQERMLD---LTVEIEGEIATLEEALRQF 380
+K +T + L F G + C KCG SE +M D L + ++G + +L+ +L +
Sbjct: 205 -VKAKTIVQDL-FSGSVSHVTTCSKCGRDSEASSKMEDFYALELNVKG-LKSLDASLNDY 261
Query: 381 TSIETLDGENKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRF----KSGKFGKLNKSIR 436
S+E L+G+N+Y C C + A + + + P V+T LKR K+ K+ S
Sbjct: 262 LSLEQLNGDNQYFCGSCNARVDATRCIKLRTLPPVITFQLKRCIFLPKTTAKKKITSSFS 321
Query: 437 FPEILDLAPFMSGTSDLAI-YRLYGVVVHLDTMNAAFSGHYVCYVKNFQN-RWFKVDD 492
FP++LD+ ++ +S + Y L V++H + A SGHYV ++K+ + W++ DD
Sbjct: 322 FPQVLDMGSRLAESSQNKLTYDLSAVLIHKGS--AVNSGHYVAHIKDEKTGLWWEFDD 377
>AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1116
Length = 1116
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 133/299 (44%), Gaps = 42/299 (14%)
Query: 213 GLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSCTNRKWCFVCDLESLILKAKDTKS 272
GL N G +CY N++LQ L P Y + ++ T A
Sbjct: 200 GLKNQGATCYMNSLLQTLYHIP----YFRKAVYHMPTTEND-------------APTASI 242
Query: 273 PLSPKDILSQLQKNGS-----QLGNGREEDAHE-FLRHVIETMQSVCLMESGPNMPDSLK 326
PL+ + + +LQ N + +L D ++ F++H ++ + V + M ++
Sbjct: 243 PLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV 302
Query: 327 EETNLTGLTFGGYLRSKIKCMKCGGKSERQERMLDLTVEIEGEIATLEEALRQFTSIETL 386
E T F G+ + I+C+ KS R+E DL ++++G + + ++ +E L
Sbjct: 303 EGT--IQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKG-CKDVYASFDKYVEVERL 359
Query: 387 DGENKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFK----SGKFGKLNKSIRFPEILD 442
+G+NKYH Q AKK + + P VL + LKRF+ K+N FP LD
Sbjct: 360 EGDNKYHA-EGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELD 418
Query: 443 L----APFMSGTSDLAI---YRLYGVVVHLDTMNAAFSGHYVCYVK-NFQNRWFKVDDS 493
L ++S +D ++ Y L+ V+VH GHY +++ ++W+K DD
Sbjct: 419 LDREDGKYLSPDADRSVRNLYTLHSVLVH---SGGVHGGHYYAFIRPTLSDQWYKFDDE 474
>AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1115
Length = 1115
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 133/299 (44%), Gaps = 42/299 (14%)
Query: 213 GLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSCTNRKWCFVCDLESLILKAKDTKS 272
GL N G +CY N++LQ L P Y + ++ T A
Sbjct: 199 GLKNQGATCYMNSLLQTLYHIP----YFRKAVYHMPTTEND-------------APTASI 241
Query: 273 PLSPKDILSQLQKNGS-----QLGNGREEDAHE-FLRHVIETMQSVCLMESGPNMPDSLK 326
PL+ + + +LQ N + +L D ++ F++H ++ + V + M ++
Sbjct: 242 PLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV 301
Query: 327 EETNLTGLTFGGYLRSKIKCMKCGGKSERQERMLDLTVEIEGEIATLEEALRQFTSIETL 386
E T F G+ + I+C+ KS R+E DL ++++G + + ++ +E L
Sbjct: 302 EGT--IQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKG-CKDVYASFDKYVEVERL 358
Query: 387 DGENKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFK----SGKFGKLNKSIRFPEILD 442
+G+NKYH Q AKK + + P VL + LKRF+ K+N FP LD
Sbjct: 359 EGDNKYHA-EGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELD 417
Query: 443 L----APFMSGTSDLAI---YRLYGVVVHLDTMNAAFSGHYVCYVK-NFQNRWFKVDDS 493
L ++S +D ++ Y L+ V+VH GHY +++ ++W+K DD
Sbjct: 418 LDREDGKYLSPDADRSVRNLYTLHSVLVH---SGGVHGGHYYAFIRPTLSDQWYKFDDE 473
>AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1114
Length = 1114
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 133/299 (44%), Gaps = 42/299 (14%)
Query: 213 GLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSCTNRKWCFVCDLESLILKAKDTKS 272
GL N G +CY N++LQ L P Y + ++ T A
Sbjct: 198 GLKNQGATCYMNSLLQTLYHIP----YFRKAVYHMPTTEND-------------APTASI 240
Query: 273 PLSPKDILSQLQKNGS-----QLGNGREEDAHE-FLRHVIETMQSVCLMESGPNMPDSLK 326
PL+ + + +LQ N + +L D ++ F++H ++ + V + M ++
Sbjct: 241 PLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV 300
Query: 327 EETNLTGLTFGGYLRSKIKCMKCGGKSERQERMLDLTVEIEGEIATLEEALRQFTSIETL 386
E T F G+ + I+C+ KS R+E DL ++++G + + ++ +E L
Sbjct: 301 EGT--IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG-CKDVYASFDKYVEVERL 357
Query: 387 DGENKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFK----SGKFGKLNKSIRFPEILD 442
+G+NKYH Q AKK + + P VL + LKRF+ K+N FP LD
Sbjct: 358 EGDNKYHA-EGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLD 416
Query: 443 L----APFMSGTSDLAI---YRLYGVVVHLDTMNAAFSGHYVCYVK-NFQNRWFKVDDS 493
L ++S +D ++ Y L+ V+VH GHY +++ ++W+K DD
Sbjct: 417 LDREDGRYLSPDADKSVRNLYTLHSVLVH---SGGVHGGHYYAFIRPTLSDQWYKFDDE 472
>AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2020682-2027834 REVERSE LENGTH=985
Length = 985
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 133/299 (44%), Gaps = 42/299 (14%)
Query: 213 GLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSCTNRKWCFVCDLESLILKAKDTKS 272
GL N G +CY N++LQ L P Y + ++ T A
Sbjct: 200 GLKNQGATCYMNSLLQTLYHIP----YFRKAVYHMPTTEND-------------APTASI 242
Query: 273 PLSPKDILSQLQKNGS-----QLGNGREEDAHE-FLRHVIETMQSVCLMESGPNMPDSLK 326
PL+ + + +LQ N + +L D ++ F++H ++ + V + M ++
Sbjct: 243 PLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV 302
Query: 327 EETNLTGLTFGGYLRSKIKCMKCGGKSERQERMLDLTVEIEGEIATLEEALRQFTSIETL 386
E T F G+ + I+C+ KS R+E DL ++++G + + ++ +E L
Sbjct: 303 EGT--IQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKG-CKDVYASFDKYVEVERL 359
Query: 387 DGENKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFK----SGKFGKLNKSIRFPEILD 442
+G+NKYH Q AKK + + P VL + LKRF+ K+N FP LD
Sbjct: 360 EGDNKYHA-EGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELD 418
Query: 443 L----APFMSGTSDLAI---YRLYGVVVHLDTMNAAFSGHYVCYVK-NFQNRWFKVDDS 493
L ++S +D ++ Y L+ V+VH GHY +++ ++W+K DD
Sbjct: 419 LDREDGKYLSPDADRSVRNLYTLHSVLVH---SGGVHGGHYYAFIRPTLSDQWYKFDDE 474
>AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1115
Length = 1115
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 133/299 (44%), Gaps = 42/299 (14%)
Query: 213 GLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSCTNRKWCFVCDLESLILKAKDTKS 272
GL N G +CY N++LQ L P Y + ++ T A
Sbjct: 199 GLKNQGATCYMNSLLQTLYHIP----YFRKAVYHMPTTEND-------------APTASI 241
Query: 273 PLSPKDILSQLQKNGS-----QLGNGREEDAHE-FLRHVIETMQSVCLMESGPNMPDSLK 326
PL+ + + +LQ N + +L D ++ F++H ++ + V + M ++
Sbjct: 242 PLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV 301
Query: 327 EETNLTGLTFGGYLRSKIKCMKCGGKSERQERMLDLTVEIEGEIATLEEALRQFTSIETL 386
E T F G+ + I+C+ KS R+E DL ++++G + + ++ +E L
Sbjct: 302 EGT--IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG-CKDVYASFDKYVEVERL 358
Query: 387 DGENKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFK----SGKFGKLNKSIRFPEILD 442
+G+NKYH Q AKK + + P VL + LKRF+ K+N FP LD
Sbjct: 359 EGDNKYHA-EGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLD 417
Query: 443 L----APFMSGTSDLAI---YRLYGVVVHLDTMNAAFSGHYVCYVK-NFQNRWFKVDDS 493
L ++S +D ++ Y L+ V+VH GHY +++ ++W+K DD
Sbjct: 418 LDREDGRYLSPDADKSVRNLYTLHSVLVH---SGGVHGGHYYAFIRPTLSDQWYKFDDE 473
>AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 369 EIATLEEALRQFTSIETLDGENKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFKSGKF 428
E +L + L F + E L ++ ++C CK +++A KK+ + P +L I LKRF +F
Sbjct: 762 ESVSLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSRF 821
Query: 429 --GKLNKSIRFP-EILDLAPFMSGTSDLAIYR--LYGVVVHLDTMNAAFSGHYVCYVKNF 483
KL + FP + LDL+ ++S + YR LY + H +M GHY YV +
Sbjct: 822 MKNKLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYGSMGG---GHYTAYVHHG 878
Query: 484 QNRWFKVDDSXXXXXXXXXXXXKGAYMLLYAR 515
+RW+ DDS AY+L Y R
Sbjct: 879 GDRWYDFDDSHVHQISQEKIKTSAAYVLFYKR 910
>AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 369 EIATLEEALRQFTSIETLDGENKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFKSGKF 428
E +L + L F + E L ++ ++C CK +++A KK+ + P +L I LKRF +F
Sbjct: 762 ESVSLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSRF 821
Query: 429 --GKLNKSIRFP-EILDLAPFMSGTSDLAIYR--LYGVVVHLDTMNAAFSGHYVCYVKNF 483
KL + FP + LDL+ ++S + YR LY + H +M GHY YV +
Sbjct: 822 MKNKLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYGSMGG---GHYTAYVHHG 878
Query: 484 QNRWFKVDDSXXXXXXXXXXXXKGAYMLLYAR 515
+RW+ DDS AY+L Y R
Sbjct: 879 GDRWYDFDDSHVHQISQEKIKTSAAYVLFYKR 910
>AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific protease 2
| chr1:1369306-1372290 REVERSE LENGTH=961
Length = 961
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 403 AKKKMTVSEAPNVLTITLKRFKS---GKFGKLNKSIRFPEILDLAPFMSGT---SDLAIY 456
A KK+ +++AP VLTI LKRF G+ KLN + F E++DL +M D +Y
Sbjct: 832 ATKKVLINKAPPVLTIHLKRFSQDLRGRLSKLNGHVAFKEVIDLRQYMDSRCSGEDPPVY 891
Query: 457 RLYGVVVHLDTMNAAFSGHYVCYVKNFQ---------NRWFKVDDSXXXXXXXXXXXXKG 507
RL G+V H TM GHYV YV+ Q W+ V D+
Sbjct: 892 RLAGLVEHSGTMRG---GHYVAYVRGGQRVKETDSSSTAWYNVSDAYVRQVSLEKVLHSE 948
Query: 508 AYMLLYAR 515
AY+L Y R
Sbjct: 949 AYILFYER 956
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 8/156 (5%)
Query: 213 GLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSCTNRKWCFVCDLESLILKAKDT-- 270
GL+N GN+C+ N+++Q L L + L+ ++ + L L + K
Sbjct: 232 GLVNLGNTCFFNSIMQNLLSLDRLRDHFLK----ENGSGVGGPLASSLRKLFTETKPEAG 287
Query: 271 -KSPLSPKDILSQLQKNGSQLGNGREEDAHEFLRHVIETMQSV-CLMESGPNMPDSLKEE 328
KS ++P+ Q + D+HE LR +++++ + + + D+ ++
Sbjct: 288 LKSVINPRAFFGSFCSKAPQFRGYDQHDSHELLRCLLDSLSTEESALRKKRGVSDNDEKS 347
Query: 329 TNLTGLTFGGYLRSKIKCMKCGGKSERQERMLDLTV 364
T L FGG S + CM+CG S+ E LDL++
Sbjct: 348 TTLIESVFGGETSSIVSCMECGHSSKVYEPFLDLSL 383
>AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 140/370 (37%), Gaps = 72/370 (19%)
Query: 208 EFQPFGLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSCTNRKWCFVCDLESLI--- 264
+F P GLIN GN C+ NA LQ L P LLQ++ + + I
Sbjct: 193 DFTPRGLINAGNLCFLNATLQALLSCSPFVQ-LLQKIQLQDIPKADSPTLAAFSEFISEL 251
Query: 265 -----------LKAKDTKSPLSP-----------KDILSQLQKNGSQLGNGREEDAHEFL 302
+ + P P D+L+ + G R+EDA EFL
Sbjct: 252 DVPSSSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMS------GRPRQEDAQEFL 305
Query: 303 RHVIETMQS--VCLMESGPNMP------------DSLKEET----NLTGLT--------- 335
+++ M + L E P + D + ET N + +T
Sbjct: 306 SFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVGPKNKSAVTRTQSFVPSE 365
Query: 336 ----FGGYLRSKIKCMKCGGKSERQERML-DLTVEIEGEIATLEEALRQFTSIETLDGEN 390
FGG L+S +K + Q +L L + +G + +E+AL F++ E L+G
Sbjct: 366 LSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPDG-VQGIEDALHLFSAQEDLEGY- 423
Query: 391 KYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFKSGKFG--KLNKSIRFPEILDL--APF 446
+ A K + + + ++ + L RF G G KL K ++FP L+L +
Sbjct: 424 RASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLNRSHL 483
Query: 447 MSGTSDLAIYRLYGVVVHLDTMNAAFSGHYVCYVKNFQNRWFKVDDSXXXXXXXXXXXXK 506
+S +++ Y L + H + GHY + +W + DD+
Sbjct: 484 VSLSNESLRYELVATITHHGWDPS--KGHYTTDARRKNGQWLRFDDASVTPIGTKLVLHD 541
Query: 507 GAYMLLYARC 516
AY+L Y +
Sbjct: 542 QAYVLFYKQV 551
>AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 140/370 (37%), Gaps = 72/370 (19%)
Query: 208 EFQPFGLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSCTNRKWCFVCDLESLI--- 264
+F P GLIN GN C+ NA LQ L P LLQ++ + + I
Sbjct: 193 DFTPRGLINAGNLCFLNATLQALLSCSPFVQ-LLQKIQLQDIPKADSPTLAAFSEFISEL 251
Query: 265 -----------LKAKDTKSPLSP-----------KDILSQLQKNGSQLGNGREEDAHEFL 302
+ + P P D+L+ + G R+EDA EFL
Sbjct: 252 DVPSSSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMS------GRPRQEDAQEFL 305
Query: 303 RHVIETMQS--VCLMESGPNMP------------DSLKEET----NLTGLT--------- 335
+++ M + L E P + D + ET N + +T
Sbjct: 306 SFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVGPKNKSAVTRTQSFVPSE 365
Query: 336 ----FGGYLRSKIKCMKCGGKSERQERML-DLTVEIEGEIATLEEALRQFTSIETLDGEN 390
FGG L+S +K + Q +L L + +G + +E+AL F++ E L+G
Sbjct: 366 LSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPDG-VQGIEDALHLFSAQEDLEGY- 423
Query: 391 KYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFKSGKFG--KLNKSIRFPEILDL--APF 446
+ A K + + + ++ + L RF G G KL K ++FP L+L +
Sbjct: 424 RASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLNRSHL 483
Query: 447 MSGTSDLAIYRLYGVVVHLDTMNAAFSGHYVCYVKNFQNRWFKVDDSXXXXXXXXXXXXK 506
+S +++ Y L + H + GHY + +W + DD+
Sbjct: 484 VSLSNESLRYELVATITHHGWDPS--KGHYTTDARRKNGQWLRFDDASVTPIGTKLVLHD 541
Query: 507 GAYMLLYARC 516
AY+L Y +
Sbjct: 542 QAYVLFYKQV 551
>AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 140/370 (37%), Gaps = 72/370 (19%)
Query: 208 EFQPFGLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSCTNRKWCFVCDLESLI--- 264
+F P GLIN GN C+ NA LQ L P LLQ++ + + I
Sbjct: 193 DFTPRGLINAGNLCFLNATLQALLSCSPFVQ-LLQKIQLQDIPKADSPTLAAFSEFISEL 251
Query: 265 -----------LKAKDTKSPLSP-----------KDILSQLQKNGSQLGNGREEDAHEFL 302
+ + P P D+L+ + G R+EDA EFL
Sbjct: 252 DVPSSSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMS------GRPRQEDAQEFL 305
Query: 303 RHVIETMQS--VCLMESGPNMP------------DSLKEET----NLTGLT--------- 335
+++ M + L E P + D + ET N + +T
Sbjct: 306 SFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVGPKNKSAVTRTQSFVPSE 365
Query: 336 ----FGGYLRSKIKCMKCGGKSERQERML-DLTVEIEGEIATLEEALRQFTSIETLDGEN 390
FGG L+S +K + Q +L L + +G + +E+AL F++ E L+G
Sbjct: 366 LSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPDG-VQGIEDALHLFSAQEDLEGY- 423
Query: 391 KYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFKSGKFG--KLNKSIRFPEILDL--APF 446
+ A K + + + ++ + L RF G G KL K ++FP L+L +
Sbjct: 424 RASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLNRSHL 483
Query: 447 MSGTSDLAIYRLYGVVVHLDTMNAAFSGHYVCYVKNFQNRWFKVDDSXXXXXXXXXXXXK 506
+S +++ Y L + H + GHY + +W + DD+
Sbjct: 484 VSLSNESLRYELVATITHHGWDPS--KGHYTTDARRKNGQWLRFDDASVTPIGTKLVLHD 541
Query: 507 GAYMLLYARC 516
AY+L Y +
Sbjct: 542 QAYVLFYKQV 551
>AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 8/153 (5%)
Query: 369 EIATLEEALRQFTSIETLDGENKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFKSGKF 428
E +L L F + E L ++ + C CK +++A KK+ + + P++L LKRF ++
Sbjct: 745 ESISLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRY 804
Query: 429 --GKLNKSIRFP-EILDLAPFMSGTSDLA-IYRLYGVVVHLDTMNAAFSGHYVCYVKNF- 483
K++ + FP LDL+ ++ +D + +Y LY V H + HY Y K
Sbjct: 805 LKNKIDTFVNFPVHDLDLSKYVKNKNDQSYLYELYAVSNHYGGLGGG---HYTAYAKLID 861
Query: 484 QNRWFKVDDSXXXXXXXXXXXXKGAYMLLYARC 516
N W+ DDS AY+L Y R
Sbjct: 862 DNEWYHFDDSHVSSVNESEIKNSAAYVLFYRRV 894
>AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 8/153 (5%)
Query: 369 EIATLEEALRQFTSIETLDGENKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFKSGKF 428
E +L L F + E L ++ + C CK +++A KK+ + + P++L LKRF ++
Sbjct: 745 ESISLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRY 804
Query: 429 --GKLNKSIRFP-EILDLAPFMSGTSDLA-IYRLYGVVVHLDTMNAAFSGHYVCYVKNF- 483
K++ + FP LDL+ ++ +D + +Y LY V H + HY Y K
Sbjct: 805 LKNKIDTFVNFPVHDLDLSKYVKNKNDQSYLYELYAVSNHYGGLGGG---HYTAYAKLID 861
Query: 484 QNRWFKVDDSXXXXXXXXXXXXKGAYMLLYARC 516
N W+ DDS AY+L Y R
Sbjct: 862 DNEWYHFDDSHVSSVNESEIKNSAAYVLFYRRV 894
>AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific protease 1 |
chr2:13898431-13901870 REVERSE LENGTH=1083
Length = 1083
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 22/134 (16%)
Query: 401 QKAKKKMTVSEAPNVLTITLKRFKS---GKFGKLNKSIRFPEILDLAPFMS---GTSDLA 454
+ A+KK+ +++AP VLTI LKRF G+ KL+ + F E +DL+ +M D
Sbjct: 952 RDARKKVLINKAPPVLTIHLKRFSQDARGRVSKLSGHVDFQEFIDLSKYMDTRCSEEDEP 1011
Query: 455 IYRLYGVVVHLDTMNAAFSGHYVCYVKNFQNR-------------WFKVDDSXXXXXXXX 501
+YRL G+V HL M+ GHYV Y++ W+ DS
Sbjct: 1012 VYRLAGLVEHLGAMS---RGHYVSYIRGGHKERRDSDTKEPNSSIWYHASDSQVRPASLE 1068
Query: 502 XXXXKGAYMLLYAR 515
AY+L Y R
Sbjct: 1069 EVLRSEAYILFYER 1082
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 213 GLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSCTNRKWCFVCDLESLILKAKDTKS 272
GL+N GN+C+ N+V+Q L L + L+ S S V L+ L ++ S
Sbjct: 203 GLVNLGNTCFFNSVMQNLLSLDQLREHFLKEDLSVSGP-----LVSSLKELFAESNSEAS 257
Query: 273 ----PLSPKDILSQLQKNGSQLGNGREEDAHEFLRHVIE--TMQSVCLME----SGPNMP 322
++P+D+ + Q ++ D+HE LR +++ +++ L + S N
Sbjct: 258 VFRNEINPRDLFFSVCSQAPQFRGYQQHDSHELLRCLLDGLSIEESSLRKKLGVSDSNDS 317
Query: 323 DSLKEETNLTGLTFGGYLRSKIKCMKCGGKSERQERMLDLTVEI 366
+ ++ T L FGG + S + C++CG S+ E +DL++ +
Sbjct: 318 STYQKPT-LIDSVFGGEISSTVSCLECGHFSKVYEPFMDLSLPV 360
>AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 |
chr4:6523657-6528058 REVERSE LENGTH=923
Length = 923
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 8/152 (5%)
Query: 369 EIATLEEALRQFTSIETLDGENKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFKSGKF 428
E +L L F + E L ++ + C CK +++A KK+ + + P++L LKRF ++
Sbjct: 746 ESISLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRY 805
Query: 429 --GKLNKSIRFP-EILDLAPFMSGTSDLA-IYRLYGVVVHLDTMNAAFSGHYVCYVKNF- 483
K++ + FP LDL+ ++ + + +Y LY V H + HY Y K
Sbjct: 806 LKNKIDTFVNFPVHDLDLSKYVKNKNGQSYLYELYAVSNHYGGLGGG---HYTAYAKLID 862
Query: 484 QNRWFKVDDSXXXXXXXXXXXXKGAYMLLYAR 515
N+W+ DDS AY+L Y R
Sbjct: 863 DNKWYHFDDSHVSSVNESEIRNSAAYVLFYRR 894
>AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific
protease 5 | chr2:17076714-17082192 REVERSE LENGTH=924
Length = 924
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 70/161 (43%), Gaps = 9/161 (5%)
Query: 363 TVEIEGEIATLEEALRQFTSIETLDGENKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKR 422
T + E +L L F E L + + C +C ++A KK+ + P VL I LKR
Sbjct: 760 TKKARSEPLSLYACLEAFLREEPLVPDEMWFCPQCNERRQASKKLDLWRLPEVLVIHLKR 819
Query: 423 FKSGKF--GKLNKSIRFP-EILDLAPFMSGT--SDLAIYRLYGVVVHLDTMNAAFSGHYV 477
F + KL + FP LDL +++ S +Y LY + H M SGHY
Sbjct: 820 FSYSRSMKHKLETFVNFPIHDLDLTKYVANKNLSQPQLYELYALTNHYGGMG---SGHYT 876
Query: 478 CYVKNFQN-RWFKVDDSXXXXXXXXXXXXKGAYMLLYARCS 517
++K + RW+ DDS AY+L Y R S
Sbjct: 877 AHIKLLDDSRWYNFDDSHISHINEDDVKSGAAYVLFYRRKS 917
>AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 |
chr1:11902629-11906900 FORWARD LENGTH=892
Length = 892
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 8/153 (5%)
Query: 369 EIATLEEALRQFTSIETLDGENKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRFKSGKF 428
E +L L F + E L ++ ++C CK +++A KK+ + + P++L LKRF ++
Sbjct: 731 EGISLFSCLEAFLAEEPLGPDDMWYCPGCKEHRQANKKLDLWKLPDILVFHLKRFTYSRY 790
Query: 429 --GKLNKSIRFP-EILDLAPFMSGTSDLA-IYRLYGVVVHLDTMNAAFSGHYVCYVKNF- 483
K++ + F LDL+ ++ + +Y LY + H + HY Y K
Sbjct: 791 FKNKIDTLVNFHIHDLDLSKYVKNEDGQSYLYELYAISNHYGGLGGG---HYTAYAKLMD 847
Query: 484 QNRWFKVDDSXXXXXXXXXXXXKGAYMLLYARC 516
+ +W+ DDS AY+L Y R
Sbjct: 848 ETKWYNFDDSRVSAVNESEIKTSAAYVLFYQRV 880
>AT3G21280.1 | Symbols: UBP7 | ubiquitin-specific protease 7 |
chr3:7478166-7482037 REVERSE LENGTH=532
Length = 532
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 95/242 (39%), Gaps = 23/242 (9%)
Query: 213 GLINCGNSCYANAVLQCLAFTPPLTAYL--LQRLHSKSCTNRKWCFVCDLESLILKAKDT 270
GL+N GN+CY N+ +QCL P L + L Q +K L + +
Sbjct: 160 GLVNLGNTCYMNSTMQCLISVPELKSELSNYQSARTKDVDQTSHMLTVATRELFSELDKS 219
Query: 271 KSPLSPKDILSQLQKNGSQL-----GNGREEDAHEFLRHVIETMQSVCLMESGPNMPDSL 325
++P LQK Q GN ++DA E ++ T+ + S PD++
Sbjct: 220 VKAVAPMPFWMVLQKKYPQFAQLHNGNHMQQDAEECWTQMLYTLSQSLKLPSPSEDPDAV 279
Query: 326 KEETNLTGLTFGGYLRSKIKCMKCGGKSERQERMLDLTVEIEGEIATLEEALRQFTSIET 385
K FG L +++ C + +S E + L I E+ L E L+
Sbjct: 280 KA-------LFGLNLLNRLHCQESSEESSETESVFSLKCHISHEVNHLHEGLKH-----G 327
Query: 386 LDGENKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRF----KSGKFGKLNKSIRFPEIL 441
L GE + K+ + P LT+ RF +S + K+ + + +P L
Sbjct: 328 LKGELEKTSPSLGRTAVYVKESLIDSLPRYLTVQFVRFFWKRESNQKAKILRKVDYPLEL 387
Query: 442 DL 443
D+
Sbjct: 388 DI 389
>AT1G51710.2 | Symbols: UBP6 | ubiquitin-specific protease 6 |
chr1:19175805-19179399 REVERSE LENGTH=443
Length = 443
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 97/243 (39%), Gaps = 24/243 (9%)
Query: 213 GLINCGNSCYANAVLQCLAFTPPLTAYLLQ---RLHSKSCTNRKWCFVCDLESLILKAKD 269
GL+N GN+CY N+ +QCL P L + L S L +
Sbjct: 66 GLVNLGNTCYMNSTVQCLKSVPELKSALSNYSLAARSNDVDQTSHMLTVATRELFGELDR 125
Query: 270 TKSPLSPKDILSQLQK---NGSQLGNG--REEDAHEFLRHVIETMQSVCLMESGPNMPDS 324
+ + +SP L+K SQL NG ++DA E ++ T+ + D+
Sbjct: 126 SVNAVSPSQFWMVLRKKYPQFSQLQNGMHMQQDAEECWTQLLYTLSQSLKAPTSSEGADA 185
Query: 325 LKEETNLTGLTFGGYLRSKIKCMKCGGKSERQERMLDLTVEIEGEIATLEEALRQFTSIE 384
+K FG L+S++ C + G +S E + L I E+ L E L+
Sbjct: 186 VKA-------LFGVNLQSRLHCQESGEESSETESVYSLKCHISHEVNHLHEGLKH----- 233
Query: 385 TLDGENKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRF----KSGKFGKLNKSIRFPEI 440
L GE + K+ + P LT+ RF +S + K+ + + +P +
Sbjct: 234 GLKGELEKTSPALGRTALYVKESLIDSLPRYLTVQFVRFFWKRESNQKAKILRKVDYPLV 293
Query: 441 LDL 443
LD+
Sbjct: 294 LDI 296
>AT1G51710.1 | Symbols: UBP6, ATUBP6 | ubiquitin-specific protease 6
| chr1:19175805-19179894 REVERSE LENGTH=482
Length = 482
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 97/243 (39%), Gaps = 24/243 (9%)
Query: 213 GLINCGNSCYANAVLQCLAFTPPLTAYLLQ---RLHSKSCTNRKWCFVCDLESLILKAKD 269
GL+N GN+CY N+ +QCL P L + L S L +
Sbjct: 105 GLVNLGNTCYMNSTVQCLKSVPELKSALSNYSLAARSNDVDQTSHMLTVATRELFGELDR 164
Query: 270 TKSPLSPKDILSQLQK---NGSQLGNG--REEDAHEFLRHVIETMQSVCLMESGPNMPDS 324
+ + +SP L+K SQL NG ++DA E ++ T+ + D+
Sbjct: 165 SVNAVSPSQFWMVLRKKYPQFSQLQNGMHMQQDAEECWTQLLYTLSQSLKAPTSSEGADA 224
Query: 325 LKEETNLTGLTFGGYLRSKIKCMKCGGKSERQERMLDLTVEIEGEIATLEEALRQFTSIE 384
+K FG L+S++ C + G +S E + L I E+ L E L+
Sbjct: 225 VKA-------LFGVNLQSRLHCQESGEESSETESVYSLKCHISHEVNHLHEGLKH----- 272
Query: 385 TLDGENKYHCVRCKSYQKAKKKMTVSEAPNVLTITLKRF----KSGKFGKLNKSIRFPEI 440
L GE + K+ + P LT+ RF +S + K+ + + +P +
Sbjct: 273 GLKGELEKTSPALGRTALYVKESLIDSLPRYLTVQFVRFFWKRESNQKAKILRKVDYPLV 332
Query: 441 LDL 443
LD+
Sbjct: 333 LDI 335