Miyakogusa Predicted Gene
- Lj6g3v1601950.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1601950.3 tr|G7K852|G7K852_MEDTR Transmembrane protein 45B
OS=Medicago truncatula GN=MTR_5g027180 PE=4
SV=1,79.14,0,DUF716,Protein of unknown function DUF716, TMEM45;
SUBFAMILY NOT NAMED,NULL; EPIDIDYMAL MEMBRANE PRO,CUFF.59786.3
(278 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G32120.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 356 1e-98
AT1G55240.1 | Symbols: | Family of unknown function (DUF716) |... 132 2e-31
AT1G55230.1 | Symbols: | Family of unknown function (DUF716) |... 128 3e-30
AT5G19870.1 | Symbols: | Family of unknown function (DUF716) |... 94 1e-19
AT1G49470.1 | Symbols: | Family of unknown function (DUF716) |... 92 5e-19
AT5G13890.3 | Symbols: | Family of unknown function (DUF716) |... 52 4e-07
AT5G13890.2 | Symbols: | Family of unknown function (DUF716) |... 52 4e-07
AT5G13890.1 | Symbols: | Family of unknown function (DUF716) |... 52 4e-07
>AT1G32120.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 4 anthesis, C globular stage, F mature embryo
stage, petal differentiation and expansion stage, E
expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Aminotransferase-like, plant mobile domain
(InterPro:IPR019557), Protein of unknown function DUF716
(InterPro:IPR006904); BEST Arabidopsis thaliana protein
match is: Aminotransferase-like, plant mobile domain
family protein (TAIR:AT1G51538.1); Has 16736 Blast hits
to 9656 proteins in 576 species: Archae - 4; Bacteria -
1182; Metazoa - 7098; Fungi - 2631; Plants - 1178;
Viruses - 174; Other Eukaryotes - 4469 (source: NCBI
BLink). | chr1:11552926-11558608 FORWARD LENGTH=1206
Length = 1206
Score = 356 bits (913), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 167/264 (63%), Positives = 196/264 (74%)
Query: 1 MGSFKGHALPGTLFFVVGVWHIWCSVVRYWRNPKTFRVRVWNPVPGFNGRLKHLELYVIA 60
MGSFKGHALPGTLF VVGVWHIW SVVRY NP +FRVRVW+PVPGFN R+K+LELYV+
Sbjct: 943 MGSFKGHALPGTLFLVVGVWHIWSSVVRYISNPSSFRVRVWHPVPGFNDRIKYLELYVVT 1002
Query: 61 IGAFIDMCIELFYSTHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPL 120
IG+FID+CIE YSTHLK FV GVLNPSHMNDFEHSGML MFFILG + +L+EKTR +PL
Sbjct: 1003 IGSFIDLCIEFLYSTHLKFFVNGVLNPSHMNDFEHSGMLLMFFILGFIALLSEKTRLLPL 1062
Query: 121 PEGXXXXXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFP 180
P+ HST+HKGLEG YH LLV+LIGLC++SS+AGA+ PTSFP
Sbjct: 1063 PQEALCLIAATAFTAECLLFFFHSTSHKGLEGYYHLLLVFLIGLCVISSIAGAICPTSFP 1122
Query: 181 VDLCKGIAITLQGIWFYQTAFVLYGPMLPDGCKIRDNSITCHSDDSEVRGEXXXXXXXXX 240
VDLC GIA+TLQG+WFYQTAF LYGPM+P GC ++ NS+ C S DSEV GE
Sbjct: 1123 VDLCNGIAMTLQGLWFYQTAFTLYGPMMPQGCSLKQNSVVCRSVDSEVSGEFLANFQLFS 1182
Query: 241 XXXXXXXGTLASYAYAASKYGNSQ 264
+ SY +AAS++G S+
Sbjct: 1183 LVLAVLVCVVGSYVFAASRFGVSR 1206
>AT1G55240.1 | Symbols: | Family of unknown function (DUF716) |
chr1:20605015-20606185 FORWARD LENGTH=311
Length = 311
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 122/239 (51%), Gaps = 12/239 (5%)
Query: 1 MGSFKGHALPGTLFFVVGVWHIWCSVVRYWRNPKTFRVRVWNPVPGFNGRLKHLELYVIA 60
MGSF GH LPG F +G+WH++ ++ + +P TF W P+ +L+HLELY+I
Sbjct: 1 MGSFLGHVLPGFAFVALGLWHLFNNIKLFCLHPNTFSSSTWFPI----SKLRHLELYLIM 56
Query: 61 IGAFIDMCIELFY--STHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTR-F 117
+ + + +ELF H V G + +H+++FEHS + F + V+ ++ ++ R
Sbjct: 57 LSSTASISMELFIGPRRHHPFDVDGTIPSNHLHNFEHSSISMSFLVYAVLALVLDRARPR 116
Query: 118 VPLPEGXXXXXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPT 177
EG HST H G+EG YH +L +I + +L+++ G LP
Sbjct: 117 AAASEGLTMLAAAAAFSQQLLLFHFHSTDHMGVEGQYHVILQVVIFVSLLTTIMGIFLPK 176
Query: 178 SFPVDLCKGIAITLQGIWFYQTAFVLYGP-MLPDGCKIRDNS----ITCHSDDSEVRGE 231
SF V L + +I QG+W +LY P ++P GC I D + C ++++ R +
Sbjct: 177 SFLVSLVRSSSIAFQGVWLIVIGCMLYTPSLIPKGCYIHDEGRHIIVKCSTEEALHRAK 235
>AT1G55230.1 | Symbols: | Family of unknown function (DUF716) |
chr1:20602895-20603797 FORWARD LENGTH=300
Length = 300
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 118/239 (49%), Gaps = 12/239 (5%)
Query: 1 MGSFKGHALPGTLFFVVGVWHIWCSVVRYWRNPKTFRVRVWNPVPGFNGRLKHLELYVIA 60
MG+ GH PG FF +G+WH++ ++ + NP TF W P +L+HLELY+I
Sbjct: 1 MGTLVGHVAPGFAFFALGLWHLFNNIKLFCLNPNTFTSSPWFP----TSKLRHLELYIIM 56
Query: 61 IGAFIDMCIELFY--STHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGV-VIILTEKTRF 117
+ + I + ELF H G + +H+++FEHS + F + + ++L ++ R
Sbjct: 57 VCSSISIASELFIGPKKHQPFDSDGTIPSNHLHNFEHSSISMSFLVYAIFAVVLDQERRR 116
Query: 118 VPLPEGXXXXXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPT 177
+ G HS H G+EG YH LL +I + L+++ G LP
Sbjct: 117 SNISHGLTMLVASSAFAQQLFLFHLHSADHMGIEGQYHKLLQLIIFVSFLTTLIGITLPK 176
Query: 178 SFPVDLCKGIAITLQGIWFYQTAFVLYGP-MLPDGCKIRDNS----ITCHSDDSEVRGE 231
SF V + +IT QG+WF ++L+ P ++P GC + + I C SD + R +
Sbjct: 177 SFLVSFVRSSSITFQGVWFVVMGYMLWTPSLIPKGCFLHEEEGHQVIKCSSDKAIHRAK 235
>AT5G19870.1 | Symbols: | Family of unknown function (DUF716) |
chr5:6716182-6717012 REVERSE LENGTH=276
Length = 276
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 113/217 (52%), Gaps = 11/217 (5%)
Query: 1 MGSFKGHALPGTLFFVVGVWHIWCSVVRYWRNPKTFRVRVWNPVPGFNGRLKHLELYVIA 60
MG+ GH LPG FF +G+WH++ + + +PK++ +W P+ + ++LE VI
Sbjct: 1 MGTLVGHILPGFFFFALGLWHLFNHIKIFSLHPKSYIAPLWFPL----SKPRYLEPLVII 56
Query: 61 IGAFIDMCIELFY-STHLKIF--VGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRF 117
I + + + +ELF + + F G + +H+++FEHS + F F I+ +KTR
Sbjct: 57 IASSLSISVELFLGQKNHQPFDPNDGTIPSNHLHNFEHSCISFTFITYAAFAIVFDKTR- 115
Query: 118 VPLP-EGXXXXXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLP 176
P+ HS+ H G+EG YH LL ++ + +++++ G LP
Sbjct: 116 -PIAHRSLINLIAALAFAQQLFLFHFHSSDHTGVEGHYHLLLQLVVFVSLVTTLLGIALP 174
Query: 177 TSFPVDLCKGIAITLQGIWFYQTAFVLYGP-MLPDGC 212
+SF + + ++++ QGIW A +L+ P ++P C
Sbjct: 175 SSFILSFVRSLSVSFQGIWLMSMACMLWTPSLVPKDC 211
>AT1G49470.1 | Symbols: | Family of unknown function (DUF716) |
chr1:18310554-18311462 FORWARD LENGTH=302
Length = 302
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 108/247 (43%), Gaps = 26/247 (10%)
Query: 1 MGSFKGHALPGTLFFVVGVWHIWCSVVRY-WRNPKTFRVRVWNPVPGFNGRLKHLELYVI 59
MG+F GH +PG ++G+WH++ ++ Y + P+ F + W P P +LKHLEL +I
Sbjct: 1 MGTFLGHFVPGLSLALLGLWHLFNTIRSYCLKGPEAFSAKFWFPFP----KLKHLELILI 56
Query: 60 AIGAFIDMCIELFYSTHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVP 119
+F+ + + + F L P ++ EH+ M I + E T
Sbjct: 57 LFFSFLSITL---LTLDFPNFNFSSLKP---DNLEHASMFLHLIIFACFALFCELTLCSD 110
Query: 120 LPEGXXXXXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSF 179
L G HST H GLEG YH LL + + S++A A P SF
Sbjct: 111 LFSGLIGVLSASVFAQELFLLHFHSTDHSGLEGHYHFLLQLIAFVSFSSALASASFPKSF 170
Query: 180 PVDLCKGIAITLQGIWFYQTAFVLYGP-MLPDGC-----KIRDN---------SITCHSD 224
L I++ QG WF F+L+ P +P GC DN ++ C S
Sbjct: 171 SAALFLPISVMFQGCWFLNMGFMLWIPEYVPRGCVSNMSTSTDNNRRSVYHSGAVACESP 230
Query: 225 DSEVRGE 231
+E+R +
Sbjct: 231 GAEIRAK 237
>AT5G13890.3 | Symbols: | Family of unknown function (DUF716) |
chr5:4479940-4480872 REVERSE LENGTH=310
Length = 310
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 95/249 (38%), Gaps = 19/249 (7%)
Query: 1 MGSFKGHALPGTLFFVVGVWHIWCSVVRYWRNPKTFRVRVWNPVPGFNG----------R 50
MG +G++H+ C+ ++P+++ + + P P + R
Sbjct: 1 MGEMMYKLFASASLLTLGLYHLICTFFHLLKSPQSYAAKPFYPFPRLSSVTGNNHHNHNR 60
Query: 51 LKHLELYVIAIGAFIDMCIELFYSTHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVII 110
L++L L+++ + F+ E S + V G + + + F+F I+ + +
Sbjct: 61 LQNLPLFILILSLFVAFLHETLISFYSDPLVKGSTPVHRFSSLNSAAVFFLFLIIAIYYL 120
Query: 111 LTEKTRFVPLPEGXXXXXXXXXXXXXXXXXXXHSTTHKG-LEGCYHTLLVYLIGLCILSS 169
L++ T +PLP + L+ +L + LC L
Sbjct: 121 LSDSTSLIPLPSDLLFALASVGFFLHYSAASSSAAIQTSDLQAHCDSLSARISALCSLLC 180
Query: 170 VAGALLPTSFPVDLCKGIAITLQGIWFYQTAFVLY-GPMLPDGC-KIRD------NSITC 221
+ A F D AI LQG+W QT LY +P+GC ++ D S C
Sbjct: 181 LLLACRSRLFIADAALAAAICLQGLWQLQTGLSLYVDGFIPEGCHRLLDVQSGVEGSTQC 240
Query: 222 HSDDSEVRG 230
DS++R
Sbjct: 241 DIQDSKLRA 249
>AT5G13890.2 | Symbols: | Family of unknown function (DUF716) |
chr5:4479940-4480872 REVERSE LENGTH=310
Length = 310
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 95/249 (38%), Gaps = 19/249 (7%)
Query: 1 MGSFKGHALPGTLFFVVGVWHIWCSVVRYWRNPKTFRVRVWNPVPGFNG----------R 50
MG +G++H+ C+ ++P+++ + + P P + R
Sbjct: 1 MGEMMYKLFASASLLTLGLYHLICTFFHLLKSPQSYAAKPFYPFPRLSSVTGNNHHNHNR 60
Query: 51 LKHLELYVIAIGAFIDMCIELFYSTHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVII 110
L++L L+++ + F+ E S + V G + + + F+F I+ + +
Sbjct: 61 LQNLPLFILILSLFVAFLHETLISFYSDPLVKGSTPVHRFSSLNSAAVFFLFLIIAIYYL 120
Query: 111 LTEKTRFVPLPEGXXXXXXXXXXXXXXXXXXXHSTTHKG-LEGCYHTLLVYLIGLCILSS 169
L++ T +PLP + L+ +L + LC L
Sbjct: 121 LSDSTSLIPLPSDLLFALASVGFFLHYSAASSSAAIQTSDLQAHCDSLSARISALCSLLC 180
Query: 170 VAGALLPTSFPVDLCKGIAITLQGIWFYQTAFVLY-GPMLPDGC-KIRD------NSITC 221
+ A F D AI LQG+W QT LY +P+GC ++ D S C
Sbjct: 181 LLLACRSRLFIADAALAAAICLQGLWQLQTGLSLYVDGFIPEGCHRLLDVQSGVEGSTQC 240
Query: 222 HSDDSEVRG 230
DS++R
Sbjct: 241 DIQDSKLRA 249
>AT5G13890.1 | Symbols: | Family of unknown function (DUF716) |
chr5:4479940-4480872 REVERSE LENGTH=310
Length = 310
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 95/249 (38%), Gaps = 19/249 (7%)
Query: 1 MGSFKGHALPGTLFFVVGVWHIWCSVVRYWRNPKTFRVRVWNPVPGFNG----------R 50
MG +G++H+ C+ ++P+++ + + P P + R
Sbjct: 1 MGEMMYKLFASASLLTLGLYHLICTFFHLLKSPQSYAAKPFYPFPRLSSVTGNNHHNHNR 60
Query: 51 LKHLELYVIAIGAFIDMCIELFYSTHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVII 110
L++L L+++ + F+ E S + V G + + + F+F I+ + +
Sbjct: 61 LQNLPLFILILSLFVAFLHETLISFYSDPLVKGSTPVHRFSSLNSAAVFFLFLIIAIYYL 120
Query: 111 LTEKTRFVPLPEGXXXXXXXXXXXXXXXXXXXHSTTHKG-LEGCYHTLLVYLIGLCILSS 169
L++ T +PLP + L+ +L + LC L
Sbjct: 121 LSDSTSLIPLPSDLLFALASVGFFLHYSAASSSAAIQTSDLQAHCDSLSARISALCSLLC 180
Query: 170 VAGALLPTSFPVDLCKGIAITLQGIWFYQTAFVLY-GPMLPDGC-KIRD------NSITC 221
+ A F D AI LQG+W QT LY +P+GC ++ D S C
Sbjct: 181 LLLACRSRLFIADAALAAAICLQGLWQLQTGLSLYVDGFIPEGCHRLLDVQSGVEGSTQC 240
Query: 222 HSDDSEVRG 230
DS++R
Sbjct: 241 DIQDSKLRA 249