Miyakogusa Predicted Gene

Lj6g3v1588730.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1588730.2 Non Chatacterized Hit- tr|I1MGA1|I1MGA1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.1035
PE=,91.09,0,Coatomer_E,Coatomer, epsilon subunit; COATOMER SUBUNIT
EPSILON,NULL; COATOMER SUBUNIT EPSILON,Coatom,CUFF.59638.2
         (259 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G30630.1 | Symbols:  | Coatomer epsilon subunit | chr1:108585...   430   e-121
AT2G34840.1 | Symbols:  | Coatomer epsilon subunit | chr2:147026...   418   e-117
AT2G34840.2 | Symbols:  | Coatomer epsilon subunit | chr2:147029...   313   1e-85

>AT1G30630.1 | Symbols:  | Coatomer epsilon subunit |
           chr1:10858546-10860173 REVERSE LENGTH=292
          Length = 292

 Score =  430 bits (1106), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 196/256 (76%), Positives = 234/256 (91%)

Query: 1   MATPDHLFNLRNNFYLGAFQAAINSSDVNGLSDDDAVERDSLVHRCYIALGQLQFVISEI 60
           MA PDHLFNLRN+FYLGA+QAAIN+S++  LS +D VERD LVHR YIALG  Q VISEI
Sbjct: 4   MAGPDHLFNLRNHFYLGAYQAAINNSEIPNLSQEDIVERDCLVHRAYIALGSYQLVISEI 63

Query: 61  HDSSPTPLQAVKLLALYFSAPDNKESVIASLKEWLSDPAIGNNSTLRLVAGLIFLHEQDF 120
            +++ TPLQAVKLLA+Y S+P+NKES I+SL+EWL+DP +GNN+ +RL+AG IF+HE+D+
Sbjct: 64  DEAAATPLQAVKLLAMYLSSPENKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEEDY 123

Query: 121 NEALKHTNAGGTLELHALNVQIFIKMHRSDYAERQLRIMQQIDEDHTLTQLANAWLDLAV 180
           NEALKHT++GGT++LHALNVQIFIKMHRSD+AE+QLR+MQQIDEDHTLTQLA+AWL+LAV
Sbjct: 124 NEALKHTHSGGTMDLHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASAWLNLAV 183

Query: 181 GGSKIQEAYLIFQDLSERYQSTSLLLNGKAVCCMHMGNFDEAETLLVEALNKDARDPETL 240
           GGSKIQEAYLIFQD SE+Y  TSL+LNGKAVCCMHMGNF+EAETLL+EALNKDA+DPETL
Sbjct: 184 GGSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDAKDPETL 243

Query: 241 ANLVVCCLHLGKPSSK 256
           ANLVVC LH+GK SS+
Sbjct: 244 ANLVVCSLHVGKSSSR 259


>AT2G34840.1 | Symbols:  | Coatomer epsilon subunit |
           chr2:14702603-14704165 FORWARD LENGTH=293
          Length = 293

 Score =  418 bits (1075), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 194/255 (76%), Positives = 227/255 (89%)

Query: 2   ATPDHLFNLRNNFYLGAFQAAINSSDVNGLSDDDAVERDSLVHRCYIALGQLQFVISEIH 61
           A PDHLFNLRNNFYLGA+Q AIN+S++  LS ++AVERD LV R YIALG  Q VISEI 
Sbjct: 6   AGPDHLFNLRNNFYLGAYQTAINNSEIANLSPENAVERDCLVFRSYIALGSYQLVISEID 65

Query: 62  DSSPTPLQAVKLLALYFSAPDNKESVIASLKEWLSDPAIGNNSTLRLVAGLIFLHEQDFN 121
           +S+ TPLQAVKLLA+Y S P NKES I+SLKEWL+D  IGNN TLRL+AG+IF+HE+D+N
Sbjct: 66  ESAATPLQAVKLLAMYLSTPQNKESTISSLKEWLADSTIGNNDTLRLIAGIIFMHEEDYN 125

Query: 122 EALKHTNAGGTLELHALNVQIFIKMHRSDYAERQLRIMQQIDEDHTLTQLANAWLDLAVG 181
           E LKHT+AGGT++L+ALNVQIFIKMHR++YAE+QLR+MQQIDEDHTLTQLA+AWL+LAVG
Sbjct: 126 ETLKHTHAGGTMDLYALNVQIFIKMHRAEYAEKQLRVMQQIDEDHTLTQLASAWLNLAVG 185

Query: 182 GSKIQEAYLIFQDLSERYQSTSLLLNGKAVCCMHMGNFDEAETLLVEALNKDARDPETLA 241
           GSKIQEAYLIF+D SE+Y  T L+LNGKAVCCM MGNFDEAETLL+EALNKDA+DPETLA
Sbjct: 186 GSKIQEAYLIFEDFSEKYPMTCLILNGKAVCCMQMGNFDEAETLLLEALNKDAKDPETLA 245

Query: 242 NLVVCCLHLGKPSSK 256
           NLVVC LH+GK SS+
Sbjct: 246 NLVVCSLHVGKSSSR 260


>AT2G34840.2 | Symbols:  | Coatomer epsilon subunit |
           chr2:14702932-14704165 FORWARD LENGTH=214
          Length = 214

 Score =  313 bits (801), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 141/181 (77%), Positives = 166/181 (91%)

Query: 76  LYFSAPDNKESVIASLKEWLSDPAIGNNSTLRLVAGLIFLHEQDFNEALKHTNAGGTLEL 135
           +Y S P NKES I+SLKEWL+D  IGNN TLRL+AG+IF+HE+D+NE LKHT+AGGT++L
Sbjct: 1   MYLSTPQNKESTISSLKEWLADSTIGNNDTLRLIAGIIFMHEEDYNETLKHTHAGGTMDL 60

Query: 136 HALNVQIFIKMHRSDYAERQLRIMQQIDEDHTLTQLANAWLDLAVGGSKIQEAYLIFQDL 195
           +ALNVQIFIKMHR++YAE+QLR+MQQIDEDHTLTQLA+AWL+LAVGGSKIQEAYLIF+D 
Sbjct: 61  YALNVQIFIKMHRAEYAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGSKIQEAYLIFEDF 120

Query: 196 SERYQSTSLLLNGKAVCCMHMGNFDEAETLLVEALNKDARDPETLANLVVCCLHLGKPSS 255
           SE+Y  T L+LNGKAVCCM MGNFDEAETLL+EALNKDA+DPETLANLVVC LH+GK SS
Sbjct: 121 SEKYPMTCLILNGKAVCCMQMGNFDEAETLLLEALNKDAKDPETLANLVVCSLHVGKSSS 180

Query: 256 K 256
           +
Sbjct: 181 R 181