Miyakogusa Predicted Gene
- Lj6g3v1586670.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1586670.1 tr|G7IKZ2|G7IKZ2_MEDTR DEAD-box ATP-dependent RNA
helicase OS=Medicago truncatula GN=MTR_2g032630 PE,79.96,0,Domain with
2 conserved Trp (W) residues,WW/Rsp5/WWP; DEAD-like helicases
superfamily,Helicase, supe,CUFF.59637.1
(1091 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 757 0.0
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 640 0.0
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 638 0.0
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 638 0.0
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 638 0.0
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 638 0.0
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 588 e-168
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 429 e-120
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 425 e-119
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 360 3e-99
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 318 1e-86
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 318 2e-86
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 311 1e-84
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 308 1e-83
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 307 3e-83
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 305 9e-83
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 305 9e-83
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 305 9e-83
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 301 2e-81
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 283 4e-76
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 276 8e-74
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 268 2e-71
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 266 7e-71
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 244 2e-64
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 237 4e-62
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 237 4e-62
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 237 4e-62
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 231 3e-60
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 230 5e-60
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 230 5e-60
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 219 9e-57
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 212 1e-54
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 204 3e-52
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 204 3e-52
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 204 3e-52
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 203 6e-52
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 197 4e-50
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 195 2e-49
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 194 3e-49
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 191 2e-48
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 191 2e-48
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 190 4e-48
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 190 4e-48
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 189 7e-48
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 189 8e-48
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 189 1e-47
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 189 1e-47
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 188 2e-47
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 187 3e-47
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 186 1e-46
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 182 1e-45
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 182 2e-45
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 182 2e-45
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 180 5e-45
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 180 6e-45
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 178 2e-44
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 175 1e-43
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 175 1e-43
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 175 2e-43
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 169 1e-41
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 167 4e-41
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 166 1e-40
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 162 9e-40
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 160 5e-39
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 158 2e-38
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 150 4e-36
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 146 7e-35
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 145 1e-34
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 145 2e-34
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 144 2e-34
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 140 4e-33
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 138 2e-32
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 136 7e-32
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 129 1e-29
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 111 3e-24
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 105 2e-22
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 102 1e-21
AT2G28600.1 | Symbols: | P-loop containing nucleoside triphosph... 81 3e-15
AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase... 68 4e-11
AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase (... 66 1e-10
AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2... 65 3e-10
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 64 4e-10
AT3G05740.1 | Symbols: RECQI1 | RECQ helicase l1 | chr3:1698180-... 64 5e-10
AT1G20960.2 | Symbols: emb1507 | U5 small nuclear ribonucleoprot... 62 3e-09
AT1G20960.1 | Symbols: emb1507 | U5 small nuclear ribonucleoprot... 62 3e-09
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 61 5e-09
AT2G42270.1 | Symbols: | U5 small nuclear ribonucleoprotein hel... 55 2e-07
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/702 (58%), Positives = 487/702 (69%), Gaps = 49/702 (6%)
Query: 207 QFTPQNMHYMAYQQNMVTSRQPNSQQIQPNSFPSGQPNSQQIQHNIHGQPYDNQQDFKTG 266
Q+ HYM ++ +M T NS Q P G P HGQ + +QQ++ +
Sbjct: 175 QYAHSQQHYMGFRPHMQTQGLQNSHQT-----PQGGP---------HGQQFPSQQEYNSL 220
Query: 267 FPKTKDTEFKNGSQVGVSPSQYQQRSALPVQNNQNVPAEVTSGQVPNAGANAGQPQQFRG 326
PK + EF G + G S P QN + A S + AN Q+ G
Sbjct: 221 APKREGDEFHGGKKTGFSQPHLPNSERSPSQNT-HFEANAASQKT---NANLAMAQKCNG 276
Query: 327 FSGSVQQSPSAVQTQQGGSDSFYQHV-PNFQNQMNPGMMHGHPSNVHAIGQKMGHEDKLP 385
Q + + Q QQ G++ +Q + P NQM+ M+H S+V +E+ L
Sbjct: 277 ----PQANAAVTQFQQPGANLIHQQLGPRAPNQMDQTMLH-QKSHVSPFQSNNTYENNLQ 331
Query: 386 GRAGNEYYYNSNKEMPAMGRQQVDMTQMPISRNPQDKRIGNAPFQNVMP----SGTGIAG 441
R GN+ Y N E+P G Q + MP +D RI P N P +G G G
Sbjct: 332 SRPGNDSYVNMRMEVPVRGAQPLHPAAMP-----KDIRISGGPPTNADPAMGQTGHGTYG 386
Query: 442 NAMHNMFTPPIGGPSPLSSNSLTRPPHIGSSDVTDLSPAEIYCQQHEVTATGDNIPPPFM 501
+A GP+ + SL RP + S DV LSP EIY +QHEVT TG+NIP P++
Sbjct: 387 HA----------GPA-FPNKSLVRPHFVTSPDVPHLSPVEIYRKQHEVTTTGENIPAPYI 435
Query: 502 TFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFS 561
TF+++G PPEILRE+ SAGF +PTPIQAQTWP+ALQ RDIVAIAKTGSGKTLGY++PAF
Sbjct: 436 TFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFI 495
Query: 562 LLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKELD 621
LLR N+ NGPTVL+LAPTRELATQIQ+E +FGRSSR+SCTCLYGGAPK QLKEL+
Sbjct: 496 LLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELE 555
Query: 622 RGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQT 681
RGA+IVVATPGRLNDILEMK I+ QVSLLVL+EADRMLDMGFEPQIRKIVNEIPPRRQT
Sbjct: 556 RGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQT 615
Query: 682 LMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQILR 741
LMYTATWPKEVRKIASDLLVNPVQVNIG VDELAANK+ITQYVEVVPQMEK+RRLEQILR
Sbjct: 616 LMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILR 675
Query: 742 SQERGSKIIIFCSTKRLCDQLARTIGRSFGAAAIHGDKSQGERDYVLGQFRTGKSPILVA 801
SQERGSK+IIFCSTKRLCD LAR++GR FGA IHGDK+QGERD+VL QFR+GKS +L+A
Sbjct: 676 SQERGSKVIIFCSTKRLCDHLARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIA 735
Query: 802 TDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWKHAGDLI 861
TDVAARGLDIKDIRVVINYDFPTGVEDYVHRI +A+TFF+EQDWK+A DLI
Sbjct: 736 TDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLI 795
Query: 862 KVLEGANQHVLPELRQIASR----GPANFGKDRAGM-NRFDS 898
KVLEGANQ V P++R IA R G + +DR GM NRFDS
Sbjct: 796 KVLEGANQQVPPQVRDIAMRGGGGGGPGYSQDRRGMVNRFDS 837
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 56/71 (78%), Gaps = 3/71 (4%)
Query: 1 MATAEAASAGLGPRYAPDDPSLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPAPSGPAP- 59
MAT E A GPRYAP+DP+LPQPWKGLIDGSTG+LYYWNPETNVTQYE+ PS P P
Sbjct: 1 MATTEDTPASAGPRYAPEDPTLPQPWKGLIDGSTGILYYWNPETNVTQYER--PSAPPPH 58
Query: 60 VPSTPSLAPIP 70
+TP LA IP
Sbjct: 59 SATTPKLAQIP 69
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/421 (71%), Positives = 356/421 (84%), Gaps = 8/421 (1%)
Query: 476 DLSPAEIYCQQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVA 535
+LSP E YC++HE+T +G +PPP M+F+ATG P E+LRE+YSAGFS P+PIQAQ+WP+A
Sbjct: 137 ELSP-EAYCRKHEITVSGGQVPPPLMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIA 195
Query: 536 LQGRDIVAIAKTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFK 595
+Q RDIVAIAKTGSGKTLGY++P F L++ HN+ GPT+LVL+PTRELATQIQ E K
Sbjct: 196 MQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRMGPTILVLSPTRELATQIQVEALK 255
Query: 596 FGRSSRVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEE 655
FG+SS++SC CLYGGAPK QLKE++RG +IVVATPGRLNDILEMK+I++ QVS LVL+E
Sbjct: 256 FGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDE 315
Query: 656 ADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELA 715
ADRMLDMGFEPQIRKIVNE+P +RQTLMYTATWPKEVRKIA+DLLVNP QVNIG+VDEL
Sbjct: 316 ADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELV 375
Query: 716 ANKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLARTIGRSFGAAAI 775
ANKSITQ +EV+ MEK RLEQILRSQE GSKIIIFCSTKR+CDQLAR + R+FGAAAI
Sbjct: 376 ANKSITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAI 435
Query: 776 HGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXX 835
HGDKSQ ERD VL QFR+G++P+LVATDVAARGLD+KDIRVV+NYDFP GVEDYVHRI
Sbjct: 436 HGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGR 495
Query: 836 XXXXXXXXMAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQIASRGPANFGKDRAGMNR 895
+AYTFF +QD KHA DLIK+LEGANQ V P++R++A+RG GMN+
Sbjct: 496 TGRAGATGLAYTFFGDQDAKHASDLIKILEGANQKVPPQVREMATRGG-------GGMNK 548
Query: 896 F 896
F
Sbjct: 549 F 549
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 47/62 (75%), Gaps = 6/62 (9%)
Query: 14 RYAPDDPSLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPAPSGPAPVPSTPSLAPIPGAH 73
RYAP+DP+LP+PWKGL+D TG LY+WNPETNVTQYE+PA S P P LA IP +
Sbjct: 9 RYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASSAP------PKLAAIPVSS 62
Query: 74 SM 75
S+
Sbjct: 63 SV 64
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 638 bits (1646), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/433 (70%), Positives = 362/433 (83%), Gaps = 8/433 (1%)
Query: 464 TRPPHIGSSDVTDLSPAEIYCQQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSN 523
TR P S+ ++LSP E Y ++HE+T +G +PPP M+F+ATGFPPE+LRE+ SAGFS
Sbjct: 122 TRVPLPSSAPASELSP-EAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSA 180
Query: 524 PTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTR 583
PTPIQAQ+WP+A+QGRDIVAIAKTGSGKTLGY++P F L++ N+ GPT+LVL+PTR
Sbjct: 181 PTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTILVLSPTR 240
Query: 584 ELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKI 643
ELATQIQEE KFGRSSR+SCTCLYGGAPK QL++L+RGA+IVVATPGRLNDILEM++I
Sbjct: 241 ELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRI 300
Query: 644 NVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNP 703
++ Q+S LVL+EADRMLDMGFEPQIRKIV EIP +RQTLMYTATWPK VRKIA+DLLVNP
Sbjct: 301 SLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNP 360
Query: 704 VQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLA 763
QVNIG+VDEL ANKSITQ++EVV MEKQRRLEQILRSQE GSK+IIFCSTKR+CDQL
Sbjct: 361 AQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLT 420
Query: 764 RTIGRSFGAAAIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFP 823
R + R FGAAAIHGDKSQ ERD VL QFR+G++P+LVATDVAARGLD+KDIR V+NYDFP
Sbjct: 421 RNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFP 480
Query: 824 TGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQIASRGP 883
GVEDYVHRI A+TFF +QD KHA DLIK+LEGANQ V P++R++A+RG
Sbjct: 481 NGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRGG 540
Query: 884 ANFGKDRAGMNRF 896
GMN+F
Sbjct: 541 -------GGMNKF 546
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 43/57 (75%), Gaps = 3/57 (5%)
Query: 1 MATAEAASAGLGPRYAPDDPSLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPAPSGP 57
MA AAS RYAP+D +LP+PWKGLID TG LY+WNPETNVTQYEKP PS P
Sbjct: 1 MAATAAASV---VRYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLP 54
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 638 bits (1646), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/433 (70%), Positives = 362/433 (83%), Gaps = 8/433 (1%)
Query: 464 TRPPHIGSSDVTDLSPAEIYCQQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSN 523
TR P S+ ++LSP E Y ++HE+T +G +PPP M+F+ATGFPPE+LRE+ SAGFS
Sbjct: 122 TRVPLPSSAPASELSP-EAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSA 180
Query: 524 PTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTR 583
PTPIQAQ+WP+A+QGRDIVAIAKTGSGKTLGY++P F L++ N+ GPT+LVL+PTR
Sbjct: 181 PTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTILVLSPTR 240
Query: 584 ELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKI 643
ELATQIQEE KFGRSSR+SCTCLYGGAPK QL++L+RGA+IVVATPGRLNDILEM++I
Sbjct: 241 ELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRI 300
Query: 644 NVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNP 703
++ Q+S LVL+EADRMLDMGFEPQIRKIV EIP +RQTLMYTATWPK VRKIA+DLLVNP
Sbjct: 301 SLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNP 360
Query: 704 VQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLA 763
QVNIG+VDEL ANKSITQ++EVV MEKQRRLEQILRSQE GSK+IIFCSTKR+CDQL
Sbjct: 361 AQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLT 420
Query: 764 RTIGRSFGAAAIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFP 823
R + R FGAAAIHGDKSQ ERD VL QFR+G++P+LVATDVAARGLD+KDIR V+NYDFP
Sbjct: 421 RNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFP 480
Query: 824 TGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQIASRGP 883
GVEDYVHRI A+TFF +QD KHA DLIK+LEGANQ V P++R++A+RG
Sbjct: 481 NGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRGG 540
Query: 884 ANFGKDRAGMNRF 896
GMN+F
Sbjct: 541 -------GGMNKF 546
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 43/57 (75%), Gaps = 3/57 (5%)
Query: 1 MATAEAASAGLGPRYAPDDPSLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPAPSGP 57
MA AAS RYAP+D +LP+PWKGLID TG LY+WNPETNVTQYEKP PS P
Sbjct: 1 MAATAAASV---VRYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLP 54
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 638 bits (1646), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/433 (70%), Positives = 362/433 (83%), Gaps = 8/433 (1%)
Query: 464 TRPPHIGSSDVTDLSPAEIYCQQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSN 523
TR P S+ ++LSP E Y ++HE+T +G +PPP M+F+ATGFPPE+LRE+ SAGFS
Sbjct: 122 TRVPLPSSAPASELSP-EAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSA 180
Query: 524 PTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTR 583
PTPIQAQ+WP+A+QGRDIVAIAKTGSGKTLGY++P F L++ N+ GPT+LVL+PTR
Sbjct: 181 PTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTILVLSPTR 240
Query: 584 ELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKI 643
ELATQIQEE KFGRSSR+SCTCLYGGAPK QL++L+RGA+IVVATPGRLNDILEM++I
Sbjct: 241 ELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRI 300
Query: 644 NVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNP 703
++ Q+S LVL+EADRMLDMGFEPQIRKIV EIP +RQTLMYTATWPK VRKIA+DLLVNP
Sbjct: 301 SLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNP 360
Query: 704 VQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLA 763
QVNIG+VDEL ANKSITQ++EVV MEKQRRLEQILRSQE GSK+IIFCSTKR+CDQL
Sbjct: 361 AQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLT 420
Query: 764 RTIGRSFGAAAIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFP 823
R + R FGAAAIHGDKSQ ERD VL QFR+G++P+LVATDVAARGLD+KDIR V+NYDFP
Sbjct: 421 RNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFP 480
Query: 824 TGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQIASRGP 883
GVEDYVHRI A+TFF +QD KHA DLIK+LEGANQ V P++R++A+RG
Sbjct: 481 NGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRGG 540
Query: 884 ANFGKDRAGMNRF 896
GMN+F
Sbjct: 541 -------GGMNKF 546
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 43/57 (75%), Gaps = 3/57 (5%)
Query: 1 MATAEAASAGLGPRYAPDDPSLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPAPSGP 57
MA AAS RYAP+D +LP+PWKGLID TG LY+WNPETNVTQYEKP PS P
Sbjct: 1 MAATAAASV---VRYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLP 54
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 638 bits (1645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/433 (70%), Positives = 362/433 (83%), Gaps = 8/433 (1%)
Query: 464 TRPPHIGSSDVTDLSPAEIYCQQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSN 523
TR P S+ ++LSP E Y ++HE+T +G +PPP M+F+ATGFPPE+LRE+ SAGFS
Sbjct: 122 TRVPLPSSAPASELSP-EAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSA 180
Query: 524 PTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTR 583
PTPIQAQ+WP+A+QGRDIVAIAKTGSGKTLGY++P F L++ N+ GPT+LVL+PTR
Sbjct: 181 PTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTILVLSPTR 240
Query: 584 ELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKI 643
ELATQIQEE KFGRSSR+SCTCLYGGAPK QL++L+RGA+IVVATPGRLNDILEM++I
Sbjct: 241 ELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRI 300
Query: 644 NVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNP 703
++ Q+S LVL+EADRMLDMGFEPQIRKIV EIP +RQTLMYTATWPK VRKIA+DLLVNP
Sbjct: 301 SLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNP 360
Query: 704 VQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLA 763
QVNIG+VDEL ANKSITQ++EVV MEKQRRLEQILRSQE GSK+IIFCSTKR+CDQL
Sbjct: 361 AQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLT 420
Query: 764 RTIGRSFGAAAIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFP 823
R + R FGAAAIHGDKSQ ERD VL QFR+G++P+LVATDVAARGLD+KDIR V+NYDFP
Sbjct: 421 RNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFP 480
Query: 824 TGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQIASRGP 883
GVEDYVHRI A+TFF +QD KHA DLIK+LEGANQ V P++R++A+RG
Sbjct: 481 NGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRGG 540
Query: 884 ANFGKDRAGMNRF 896
GMN+F
Sbjct: 541 -------GGMNKF 546
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 43/57 (75%), Gaps = 3/57 (5%)
Query: 1 MATAEAASAGLGPRYAPDDPSLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPAPSGP 57
MA AAS RYAP+D +LP+PWKGLID TG LY+WNPETNVTQYEKP PS P
Sbjct: 1 MAATAAASV---VRYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPTPSLP 54
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 588 bits (1516), Expect = e-168, Method: Compositional matrix adjust.
Identities = 283/399 (70%), Positives = 331/399 (82%), Gaps = 7/399 (1%)
Query: 498 PPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIM 557
PP F++ P R +YSAGFS P+PIQAQ+WP+A+Q RDIVAIAKTGSGKTLGY++
Sbjct: 226 PPAAGFNSYLVLPANGRMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLI 285
Query: 558 PAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQL 617
P F L++ HN+ GPT+LVL+PTRELATQIQ E KFG+SS++SC CLYGGAPK QL
Sbjct: 286 PGFMHLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQL 345
Query: 618 KELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPP 677
KE++RG +IVVATPGRLNDILEMK+I++ QVS LVL+EADRMLDMGFEPQIRKIVNE+P
Sbjct: 346 KEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPT 405
Query: 678 RRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYVEVVPQMEKQRRLE 737
+RQTLMYTATWPKEVRKIA+DLLVNP QVNIG+VDEL ANKSITQ +EV+ MEK RLE
Sbjct: 406 KRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLE 465
Query: 738 QILRSQERGSKIIIFCSTKRLCDQLARTIGRSFGAAAIHGDKSQGERDYVLGQFRTGKSP 797
QILRSQE GSKIIIFCSTKR+CDQLAR + R+FGAAAIHGDKSQ ERD VL QFR+G++P
Sbjct: 466 QILRSQEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTP 525
Query: 798 ILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWKHA 857
+LVATDVAARGLD+KDIRVV+NYDFP GVEDYVHRI +AYTFF +QD KHA
Sbjct: 526 VLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHA 585
Query: 858 GDLIKVLEGANQHVLPELRQIASRGPANFGKDRAGMNRF 896
DLIK+LEGANQ V P++R++A+RG GMN+F
Sbjct: 586 SDLIKILEGANQKVPPQVREMATRGG-------GGMNKF 617
Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 47/62 (75%), Gaps = 6/62 (9%)
Query: 14 RYAPDDPSLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPAPSGPAPVPSTPSLAPIPGAH 73
RYAP+DP+LP+PWKGL+D TG LY+WNPETNVTQYE+PA S P P LA IP +
Sbjct: 9 RYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASSAP------PKLAAIPVSS 62
Query: 74 SM 75
S+
Sbjct: 63 SV 64
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 25/112 (22%)
Query: 476 DLSPAEIYCQQHEVTATGDNIPPPFMTFDATGFPPEILREI-----YSAGFSNPTPIQAQ 530
+LSP E YC++HE+T +G +PPP M+F+ATG P E+LRE Y+ F P I
Sbjct: 137 ELSP-EAYCRKHEITVSGGQVPPPLMSFEATGLPNELLRECPNFMPYALSFV-PGAI--- 191
Query: 531 TWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPT 582
AL G ++V A +LG++ +S L GP L P
Sbjct: 192 ---FALGGANVVRCA-----TSLGFLQIIWSAL-------FGGPNFLRCPPA 228
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 429 bits (1104), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/429 (49%), Positives = 294/429 (68%), Gaps = 12/429 (2%)
Query: 452 IGGPSPLSSNSLTRPPHIGSSDVTDLSPAEIYCQQHEVTATGDNIPPPFMTFDATGFPPE 511
+ G +P N P + + +TD + E Y + E+T G +IP P +F GFP
Sbjct: 53 LDGLTPFEKNFYVESPAVAA--MTD-TEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDY 109
Query: 512 ILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQRHNNPL 571
+L E+ AGF+ PTPIQ+Q WP+A++GRD++ IA+TGSGKTL Y++PA + + P+
Sbjct: 110 VLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHV---NAQPM 166
Query: 572 ----NGPTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKELDRGAEIV 627
+GP VLVLAPTRELA QIQ+E KFG SS++ TC+YGG PK Q+++L +G EIV
Sbjct: 167 LAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIV 226
Query: 628 VATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTAT 687
+ATPGRL D++E N+ +V+ LVL+EADRMLDMGF+PQIRKIV+ I P RQTL ++AT
Sbjct: 227 IATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSAT 286
Query: 688 WPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQILRSQERGS 747
WPKEV +++ L NP +V IGS D L AN++I Q V+V+ + +K +L ++L GS
Sbjct: 287 WPKEVEQLSKKFLYNPYKVIIGSSD-LKANRAIRQIVDVISESQKYNKLVKLLEDIMDGS 345
Query: 748 KIIIFCSTKRLCDQLARTIGRS-FGAAAIHGDKSQGERDYVLGQFRTGKSPILVATDVAA 806
+I++F TK+ CDQ+ R + + A +IHGDKSQ ERD+VL +FR+GKSPI+ ATDVAA
Sbjct: 346 RILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAA 405
Query: 807 RGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWKHAGDLIKVLEG 866
RGLD+KD++ VINYDFP +EDYVHRI AYTFF+ + + A +L +L+
Sbjct: 406 RGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNILQE 465
Query: 867 ANQHVLPEL 875
A Q V PEL
Sbjct: 466 AGQKVSPEL 474
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 425 bits (1093), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/396 (53%), Positives = 277/396 (69%), Gaps = 3/396 (0%)
Query: 482 IYCQQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDI 541
+Y + +++ G ++P P F FP IL I GF+ PTPIQAQ WP+AL+GRD+
Sbjct: 146 MYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDL 205
Query: 542 VAIAKTGSGKTLGYIMPAF-SLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSS 600
+ IA+TGSGKTL Y++PA + Q +GP VL+LAPTRELA QIQEE KFG S
Sbjct: 206 IGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRS 265
Query: 601 RVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRML 660
V TC+YGGAPK Q+++L RG EIV+ATPGRL D+LE + N+ +V+ LVL+EADRML
Sbjct: 266 GVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRML 325
Query: 661 DMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSI 720
DMGFEPQIRKIV++I P RQTL+++ATWP+EV +A L +P + IGS D L AN+SI
Sbjct: 326 DMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTD-LKANQSI 384
Query: 721 TQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLARTIGRS-FGAAAIHGDK 779
Q +E+VP EK RL +L+ GSKI+IF TKR CDQ+ R + + A AIHGDK
Sbjct: 385 NQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDK 444
Query: 780 SQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXX 839
+Q ERD VL +F++G+SPI+ ATDVAARGLD+KDI+ V+NYDFP +EDY+HRI
Sbjct: 445 TQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRA 504
Query: 840 XXXXMAYTFFSEQDWKHAGDLIKVLEGANQHVLPEL 875
MA+TFF+ + K A +L+K+L+ A Q V P L
Sbjct: 505 GAKGMAFTFFTHDNAKFARELVKILQEAGQVVPPTL 540
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 360 bits (924), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 183/336 (54%), Positives = 236/336 (70%), Gaps = 3/336 (0%)
Query: 482 IYCQQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDI 541
+Y + +++ G ++P P F FP IL I GF+ PTPIQAQ WP+AL+GRD+
Sbjct: 146 MYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDL 205
Query: 542 VAIAKTGSGKTLGYIMPAF-SLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSS 600
+ IA+TGSGKTL Y++PA + Q +GP VL+LAPTRELA QIQEE KFG S
Sbjct: 206 IGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRS 265
Query: 601 RVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRML 660
V TC+YGGAPK Q+++L RG EIV+ATPGRL D+LE + N+ +V+ LVL+EADRML
Sbjct: 266 GVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRML 325
Query: 661 DMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSI 720
DMGFEPQIRKIV++I P RQTL+++ATWP+EV +A L +P + IGS D L AN+SI
Sbjct: 326 DMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTD-LKANQSI 384
Query: 721 TQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLARTIGRS-FGAAAIHGDK 779
Q +E+VP EK RL +L+ GSKI+IF TKR CDQ+ R + + A AIHGDK
Sbjct: 385 NQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDK 444
Query: 780 SQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIR 815
+Q ERD VL +F++G+SPI+ ATDVAARGL IR
Sbjct: 445 TQSERDRVLAEFKSGRSPIMTATDVAARGLVSSGIR 480
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 318 bits (816), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 252/423 (59%), Gaps = 15/423 (3%)
Query: 468 HIGSSDVTDLSPAEI--YCQQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPT 525
+I D++ ++ E+ Y ++ E+ G ++P P + TG +IL + + P
Sbjct: 494 YIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPM 553
Query: 526 PIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQRHNNP----LNGPTVLVLAP 581
PIQ Q P+ + GRD + +AKTGSGKTLG+++P +LR + P +GP LV+AP
Sbjct: 554 PIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLP---MLRHIKDQPPVEAGDGPIGLVMAP 610
Query: 582 TRELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDIL--- 638
TREL QI ++ KF + + C +YGG+ A Q+ EL RG EIVV TPGR+ DIL
Sbjct: 611 TRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTS 670
Query: 639 EMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASD 698
K N+ +V+ LV++EADRM DMGFEPQI +I+ I P RQT++++AT+P++V +A
Sbjct: 671 SGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARK 730
Query: 699 LLVNPVQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKRL 758
+L PV++ +G NK ITQ VEV P+ ++ RL ++L KI++F ++
Sbjct: 731 VLNKPVEIQVGG--RSVVNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQEK 788
Query: 759 CDQLART-IGRSFGAAAIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVV 817
CD L R I S+ ++HG K Q +R+ + F+ +L+AT VAARGLD+K++ +V
Sbjct: 789 CDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELV 848
Query: 818 INYDFPTGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQ 877
+N+D P EDYVHR+ A TF SE D K+A DL+K LE + Q V +L+
Sbjct: 849 VNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDLKA 908
Query: 878 IAS 880
+A
Sbjct: 909 LAD 911
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 318 bits (814), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 252/423 (59%), Gaps = 15/423 (3%)
Query: 468 HIGSSDVTDLSPAEI--YCQQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPT 525
+I D++ ++ E+ Y ++ E+ G ++P P + TG +IL + + P
Sbjct: 156 YIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPM 215
Query: 526 PIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQRHNNP----LNGPTVLVLAP 581
PIQ Q P+ + GRD + +AKTGSGKTLG+++P +LR + P +GP LV+AP
Sbjct: 216 PIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLP---MLRHIKDQPPVEAGDGPIGLVMAP 272
Query: 582 TRELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEM- 640
TREL QI ++ KF + + C +YGG+ A Q+ EL RG EIVV TPGR+ DIL
Sbjct: 273 TRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTS 332
Query: 641 --KKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASD 698
K N+ +V+ LV++EADRM DMGFEPQI +I+ I P RQT++++AT+P++V +A
Sbjct: 333 SGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARK 392
Query: 699 LLVNPVQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKRL 758
+L PV++ +G NK ITQ VEV P+ ++ RL ++L KI++F ++
Sbjct: 393 VLNKPVEIQVGG--RSVVNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQEK 450
Query: 759 CDQLAR-TIGRSFGAAAIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVV 817
CD L R I S+ ++HG K Q +R+ + F+ +L+AT VAARGLD+K++ +V
Sbjct: 451 CDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELV 510
Query: 818 INYDFPTGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQ 877
+N+D P EDYVHR+ A TF SE D K+A DL+K LE + Q V +L+
Sbjct: 511 VNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDLKA 570
Query: 878 IAS 880
+A
Sbjct: 571 LAD 573
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 311 bits (798), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 170/418 (40%), Positives = 252/418 (60%), Gaps = 19/418 (4%)
Query: 489 VTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTG 548
+ +GDN+PPP TF + I + PTP+Q P+ L+GRD++A A+TG
Sbjct: 147 IETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTG 206
Query: 549 SGKTLGYIMPAFS-LLRQRHNNPLNG-----PTVLVLAPTRELATQIQEEVFKFGRSSRV 602
SGKT + P S +++ +H G P ++L+PTRELA+QI +E KF + V
Sbjct: 207 SGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGV 266
Query: 603 SCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDM 662
YGG P QL+EL+RG +I+VATPGRLND+LE ++++ + L L+EADRMLDM
Sbjct: 267 KVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDM 326
Query: 663 GFEPQIRKIVN--EIPPR--RQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANK 718
GFEPQIRKIV ++PPR RQTL+++AT+P+E++++A+D L N + + +G V ++
Sbjct: 327 GFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVG--SSTD 384
Query: 719 SITQYVEVVPQMEKQRRLEQILRSQE------RGSKIIIFCSTKRLCDQLARTIG-RSFG 771
I Q VE V +K+ L +L +Q + + ++F TKR D L + F
Sbjct: 385 LIVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFP 444
Query: 772 AAAIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVH 831
A +IHGD++Q ER+ L F++G++PILVATDVAARGLDI + V+N+D P ++DYVH
Sbjct: 445 ATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 504
Query: 832 RIXXXXXXXXXXMAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQIASRGPANFGKD 889
RI +A FF++ + A L ++++ ANQ V L + ASR GK+
Sbjct: 505 RIGRTGRAGKSGLATAFFNDGNTSLARPLAELMQEANQEVPEWLTRYASRSSFGGGKN 562
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 308 bits (790), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 168/403 (41%), Positives = 244/403 (60%), Gaps = 6/403 (1%)
Query: 483 YCQQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIV 542
Y Q+ + +G ++ P TF+ GF +I+ I + PT IQ Q P+ L GRD++
Sbjct: 210 YRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVI 269
Query: 543 AIAKTGSGKTLGYIMPAF-SLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSR 601
IAKTGSGKT +++P ++ Q GP ++ APTRELA QI E KF ++
Sbjct: 270 GIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYG 329
Query: 602 VSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLD 661
+ + +YGG K Q KEL G EIVVATPGRL D+L+MK + + + S LVL+EADRM D
Sbjct: 330 LRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFD 389
Query: 662 MGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSIT 721
+GFEPQ+R IV +I P RQTL+++AT P +V K+A ++L +P++V +G V AN+ IT
Sbjct: 390 LGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVG--MANEDIT 447
Query: 722 QYVEVVP-QMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQL-ARTIGRSFGAAAIHGDK 779
Q V V+P EK L + L +++F S K D++ A+ SF AA+HGDK
Sbjct: 448 QVVNVIPSDAEKLPWLLEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDK 507
Query: 780 SQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI-XXXXX 838
Q R L +F++G +L+ATDVAARGLDIK ++ V+NYD ++ +VHRI
Sbjct: 508 DQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRA 567
Query: 839 XXXXXMAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQIASR 881
+AYT ++++ + AG+L+ L A Q+V PEL +A +
Sbjct: 568 GDRDGVAYTLVTQREARFAGELVNSLVAAGQNVPPELTDLAMK 610
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 307 bits (786), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 170/418 (40%), Positives = 248/418 (59%), Gaps = 19/418 (4%)
Query: 489 VTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTG 548
+ +GDN+PPP TF + I + PTP+Q P+ GRD++A A+TG
Sbjct: 134 IETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTG 193
Query: 549 SGKTLGYIMPAFS-LLRQRHNNPLNG-----PTVLVLAPTRELATQIQEEVFKFGRSSRV 602
SGKT + P S +++ +H G P ++L+PTRELA QI +E KF + V
Sbjct: 194 SGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGV 253
Query: 603 SCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDM 662
YGG P Q++EL+RG +I+VATPGRLND+LE ++++ V L L+EADRMLDM
Sbjct: 254 KVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDM 313
Query: 663 GFEPQIRKIVNEI----PPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANK 718
GFEPQIRKIV ++ P RQT++++AT+P+E++++ASD L N + + +G V ++
Sbjct: 314 GFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVG--SSTD 371
Query: 719 SITQYVEVVPQMEKQRRLEQILRSQ-ERGSK-----IIIFCSTKRLCDQLARTIG-RSFG 771
I Q VE V +K+ L +L +Q E G++ ++F TK+ D L + F
Sbjct: 372 LIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFP 431
Query: 772 AAAIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVH 831
A IHGD+SQ ER+ L F+TG++PILVATDVAARGLDI + V+N+D P ++DYVH
Sbjct: 432 ATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 491
Query: 832 RIXXXXXXXXXXMAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQIASRGPANFGKD 889
RI +A FF++ + A L ++++ ANQ V L + ASR GK+
Sbjct: 492 RIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEVPDWLTRYASRASFGGGKN 549
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 305 bits (782), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 167/409 (40%), Positives = 248/409 (60%), Gaps = 17/409 (4%)
Query: 489 VTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTG 548
V +G ++PPP TF + I + PTP+Q P+ L RD++A A+TG
Sbjct: 139 VETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTG 198
Query: 549 SGKTLGYIMPAFS-LLRQRHNNPLNG-----PTVLVLAPTRELATQIQEEVFKFGRSSRV 602
SGKT + P S +++ +H G P ++L+PTRELA QI +E KF + V
Sbjct: 199 SGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGV 258
Query: 603 SCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDM 662
YGG P QL+EL+RG +I+VATPGRLND+LE ++++ + L L+EADRMLDM
Sbjct: 259 KVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDM 318
Query: 663 GFEPQIRKIVN--EIPPR--RQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANK 718
GFEPQIRKIV ++PPR RQT++++AT+P +++++A+D + N + + +G V ++
Sbjct: 319 GFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVG--SSTD 376
Query: 719 SITQYVEVVPQMEKQRRLEQIL----RSQERGSKIIIFCSTKRLCDQLARTIG-RSFGAA 773
ITQ VE V + +K+ L +L +Q++ S ++F TKR D L + F A
Sbjct: 377 LITQRVEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPAT 436
Query: 774 AIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 833
+IHGD++Q ER+ L F+TG++PILVATDVAARGLDI + V+N+D P ++DYVHRI
Sbjct: 437 SIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRI 496
Query: 834 XXXXXXXXXXMAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQIASRG 882
+A FF+E + + A L ++++ ANQ V L + ASR
Sbjct: 497 GRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPEWLTRYASRA 545
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 305 bits (782), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 167/409 (40%), Positives = 248/409 (60%), Gaps = 17/409 (4%)
Query: 489 VTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTG 548
V +G ++PPP TF + I + PTP+Q P+ L RD++A A+TG
Sbjct: 139 VETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTG 198
Query: 549 SGKTLGYIMPAFS-LLRQRHNNPLNG-----PTVLVLAPTRELATQIQEEVFKFGRSSRV 602
SGKT + P S +++ +H G P ++L+PTRELA QI +E KF + V
Sbjct: 199 SGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGV 258
Query: 603 SCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDM 662
YGG P QL+EL+RG +I+VATPGRLND+LE ++++ + L L+EADRMLDM
Sbjct: 259 KVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDM 318
Query: 663 GFEPQIRKIVN--EIPPR--RQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANK 718
GFEPQIRKIV ++PPR RQT++++AT+P +++++A+D + N + + +G V ++
Sbjct: 319 GFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVG--SSTD 376
Query: 719 SITQYVEVVPQMEKQRRLEQIL----RSQERGSKIIIFCSTKRLCDQLARTIG-RSFGAA 773
ITQ VE V + +K+ L +L +Q++ S ++F TKR D L + F A
Sbjct: 377 LITQRVEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPAT 436
Query: 774 AIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 833
+IHGD++Q ER+ L F+TG++PILVATDVAARGLDI + V+N+D P ++DYVHRI
Sbjct: 437 SIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRI 496
Query: 834 XXXXXXXXXXMAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQIASRG 882
+A FF+E + + A L ++++ ANQ V L + ASR
Sbjct: 497 GRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPEWLTRYASRA 545
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 305 bits (782), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 167/409 (40%), Positives = 248/409 (60%), Gaps = 17/409 (4%)
Query: 489 VTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTG 548
V +G ++PPP TF + I + PTP+Q P+ L RD++A A+TG
Sbjct: 139 VETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTG 198
Query: 549 SGKTLGYIMPAFS-LLRQRHNNPLNG-----PTVLVLAPTRELATQIQEEVFKFGRSSRV 602
SGKT + P S +++ +H G P ++L+PTRELA QI +E KF + V
Sbjct: 199 SGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGV 258
Query: 603 SCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDM 662
YGG P QL+EL+RG +I+VATPGRLND+LE ++++ + L L+EADRMLDM
Sbjct: 259 KVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDM 318
Query: 663 GFEPQIRKIVN--EIPPR--RQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANK 718
GFEPQIRKIV ++PPR RQT++++AT+P +++++A+D + N + + +G V ++
Sbjct: 319 GFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVG--SSTD 376
Query: 719 SITQYVEVVPQMEKQRRLEQIL----RSQERGSKIIIFCSTKRLCDQLARTIG-RSFGAA 773
ITQ VE V + +K+ L +L +Q++ S ++F TKR D L + F A
Sbjct: 377 LITQRVEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPAT 436
Query: 774 AIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 833
+IHGD++Q ER+ L F+TG++PILVATDVAARGLDI + V+N+D P ++DYVHRI
Sbjct: 437 SIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRI 496
Query: 834 XXXXXXXXXXMAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQIASRG 882
+A FF+E + + A L ++++ ANQ V L + ASR
Sbjct: 497 GRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPEWLTRYASRA 545
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 301 bits (771), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 246/422 (58%), Gaps = 20/422 (4%)
Query: 473 DVTDLSPAEIYCQQHEVTATGDNIP----PPFMTFDATGFPPEILREIYSAGFSNPTPIQ 528
+ DL E +Q +V TG + TF + P +L F P+PIQ
Sbjct: 86 EAEDLGEGE--SEQQKVVVTGKGVEEAKYAALKTFAESNLPENVLD--CCKTFEKPSPIQ 141
Query: 529 AQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQRHNNPLNG------PTVLVLAPT 582
+ TWP L GRD++ IAKTGSGKTL + +PA + ++ N + G PT LVL+PT
Sbjct: 142 SHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKK-NKKIGGGSKKVNPTCLVLSPT 200
Query: 583 RELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKK 642
RELA QI + + + G + C+YGG+ K Q+ + G +IV+ TPGRL D++E
Sbjct: 201 RELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNV 260
Query: 643 INVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLV- 701
+ + VS +VL+EADRMLDMGFE +R I++ RQ +M++ATWP +V K+A + +
Sbjct: 261 LRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQMVMFSATWPLDVHKLAQEFMDP 320
Query: 702 NPVQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQILRSQERGSK--IIIFCSTKRLC 759
NP++V IGSVD LAAN + Q +EV+ + + +RL +L + K +++F K
Sbjct: 321 NPIKVIIGSVD-LAANHDVMQIIEVLDERARDQRLIALLEKYHKSQKNRVLVFALYKVEA 379
Query: 760 DQLARTI-GRSFGAAAIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVI 818
++L R + R + A +IHG+K+Q ER L F+ G P+LVATDVAARGLDI D+ VVI
Sbjct: 380 ERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVI 439
Query: 819 NYDFPTGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQI 878
NY FP EDYVHRI +A+TFF+ + AG+L+ VL A Q V +L +
Sbjct: 440 NYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTPLNKGLAGELVNVLREAGQVVPADLLKF 499
Query: 879 AS 880
+
Sbjct: 500 GT 501
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 283 bits (725), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 158/421 (37%), Positives = 241/421 (57%), Gaps = 42/421 (9%)
Query: 468 HIGSSDVTDLSPAEI--YCQQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPT 525
+I D++ ++ + Y ++ E+ G ++P P + TG +IL + + P
Sbjct: 361 YIEVKDISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPM 420
Query: 526 PIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQRHNNP----LNGPTVLVLAP 581
PIQAQ P+ + GRD + +AKTGSGKTLG+++P +LR + P +GP LV+AP
Sbjct: 421 PIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLP---MLRHIKDQPPVEAGDGPIGLVMAP 477
Query: 582 TRELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDIL--- 638
TREL QI ++ KF ++ + C +YGG+ A Q+ EL RG EIVV TPGR+ DIL
Sbjct: 478 TRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTS 537
Query: 639 EMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASD 698
K N+ +V+ LV++EADRM DMGFEPQI +IV I P RQT++++AT+P++V +A
Sbjct: 538 SGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARK 597
Query: 699 LLVNPVQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKRL 758
+L PV++ +G NK ITQ VE+ P+ E+ RL ++L K+++F ++
Sbjct: 598 VLNKPVEIQVGG--RSVVNKDITQLVEIRPESERFSRLLELLGEWYEKGKVLVFVRSQ-- 653
Query: 759 CDQLARTIGRSFGAAAIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVI 818
+KS + F++ +L+AT VAARGLD+K++ +V+
Sbjct: 654 -------------------EKS-------ISDFKSDVCNLLIATSVAARGLDVKELELVV 687
Query: 819 NYDFPTGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQI 878
N+D P EDYVHR+ A TF SE D K+A DL+K LE + Q V +++ +
Sbjct: 688 NFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDVKAV 747
Query: 879 A 879
A
Sbjct: 748 A 748
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 276 bits (705), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 164/406 (40%), Positives = 229/406 (56%), Gaps = 16/406 (3%)
Query: 485 QQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAI 544
+Q +T G++IPPP F FP +LR + G +PTPIQ Q PV L GRD++ I
Sbjct: 81 KQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGI 140
Query: 545 AKTGSGKTLGYIMPAFSL-LRQRHNNPL---NGPTVLVLAPTRELATQIQEEVFKFGRSS 600
A TGSGKTL +++P L L++ P+ GP LV+ P+RELA Q + V +F S
Sbjct: 141 AFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASL 200
Query: 601 ------RVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLE 654
R+ GG QL + +G IVVATPGRL DIL KK+++ LL L+
Sbjct: 201 VEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLD 260
Query: 655 EADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDEL 714
EADR++D+GFE IR + + +RQTL+++AT P +++ A+ LV PV VN+G
Sbjct: 261 EADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAG-- 318
Query: 715 AANKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLAR-TIGRSFGAA 773
AAN + Q VE V Q K L + L Q+ ++IFC K D + + + A
Sbjct: 319 AANLDVIQEVEYVKQEAKIVYLLECL--QKTTPPVLIFCENKADVDDIHEYLLLKGVEAV 376
Query: 774 AIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 833
AIHG K Q +RDY + F+ GK +LVATDVA++GLD DI+ VINYD P +E+YVHRI
Sbjct: 377 AIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRI 436
Query: 834 XXXXXXXXXXMAYTFFSE-QDWKHAGDLIKVLEGANQHVLPELRQI 878
+A TF ++ Q DL +L+ A Q + P L ++
Sbjct: 437 GRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAEL 482
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 268 bits (685), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 161/407 (39%), Positives = 227/407 (55%), Gaps = 18/407 (4%)
Query: 485 QQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAI 544
+Q + GD+IPPP F FP +L + G PTPIQ Q PV L GRD++ I
Sbjct: 130 KQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGI 189
Query: 545 AKTGSGKTLGYIMPAFSL-LRQRHNNPL---NGPTVLVLAPTRELATQIQEEVFKF---- 596
A TGSGKTL +++P + L++ P+ GP L++ P+RELA Q E V +F
Sbjct: 190 AFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPL 249
Query: 597 ---GRSSRVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVL 653
G S C+ GG QL+ + RG IVVATPGRL D+L KK+++ L L
Sbjct: 250 VEAGYPPLRSLLCI-GGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTL 308
Query: 654 EEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDE 713
+EADR++D+GFE IR++ + +RQTL+++AT P +++ A LV PV VN+G
Sbjct: 309 DEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAG- 367
Query: 714 LAANKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLAR-TIGRSFGA 772
AAN + Q VE V Q K L + L Q+ ++IFC K D + + + A
Sbjct: 368 -AANLDVIQEVEYVKQEAKIVYLLECL--QKTSPPVLIFCENKADVDDIHEYLLLKGVEA 424
Query: 773 AAIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHR 832
AIHG K Q +R+Y + F+ GK +LVATDVA++GLD DI+ VINYD P +E+YVHR
Sbjct: 425 VAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR 484
Query: 833 IXXXXXXXXXXMAYTFFSE-QDWKHAGDLIKVLEGANQHVLPELRQI 878
I +A TF ++ Q DL +L+ A Q + P L ++
Sbjct: 485 IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 531
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 266 bits (679), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 156/424 (36%), Positives = 236/424 (55%), Gaps = 28/424 (6%)
Query: 482 IYCQQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDI 541
I+ + ++ G IP P +++ + E+L+ + AG+ P+PIQ P+ LQ RD+
Sbjct: 294 IFREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDV 353
Query: 542 VAIAKTGSGKTLGYIMPAFSLLRQ----RHNNPLNGPTVLVLAPTRELATQIQEEVFKFG 597
+ IA+TGSGKT +++P + + + N GP +V+APTRELA QI+EE KF
Sbjct: 354 IGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFA 413
Query: 598 RSSRVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEAD 657
T + GG Q ++ +G EIV+ATPGRL D LE + + Q + +VL+EAD
Sbjct: 414 HYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEAD 473
Query: 658 RMLDMGFEPQIRKIVNEIPPR-----------------RQTLMYTATWPKEVRKIASDLL 700
RM+DMGFEPQ+ +++ +P R T M++AT P V ++A L
Sbjct: 474 RMIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYL 533
Query: 701 VNPVQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQILRSQERGSKI-IIFCSTKRLC 759
NPV V IG+ + I+Q+V ++ + EK RL+++L E G K I+F +TK+ C
Sbjct: 534 RNPVVVTIGTAGK--TTDLISQHVIMMKESEKFFRLQKLL--DELGEKTAIVFVNTKKNC 589
Query: 760 DQLARTIGRS-FGAAAIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVI 818
D +A+ + ++ + +HG KSQ +R+ L FR + +LVATDV RG+DI D+ VI
Sbjct: 590 DSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVI 649
Query: 819 NYDFPTGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWKHAGDLIKVLEGANQHVLPEL-RQ 877
NYD P +E Y HRI +A +F + D + DL ++L +N V PEL R
Sbjct: 650 NYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDLKQMLVQSNSAVPPELARH 709
Query: 878 IASR 881
ASR
Sbjct: 710 EASR 713
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 244 bits (624), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/386 (36%), Positives = 218/386 (56%), Gaps = 15/386 (3%)
Query: 507 GFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQ- 565
G PEI++ + S G PIQ A++GRD++ A+TG+GKTL + +P + +
Sbjct: 110 GISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKY 169
Query: 566 --RHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSS-RVSCTCLYGGAPKALQLKELDR 622
+H N P LVLAPTRELA Q+++E F S+ + CLYGG P Q+++LD
Sbjct: 170 NAKHGRGRN-PLCLVLAPTRELARQVEKE---FRESAPSLDTICLYGGTPIGQQMRQLDY 225
Query: 623 GAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQTL 682
G ++ V TPGR+ D+++ +N+ +V +VL+EAD+ML +GF + I+ ++P +RQ++
Sbjct: 226 GVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSM 285
Query: 683 MYTATWPKEVRKIASDLLVNPVQVN-IGSVDELAANKSITQYVEVVPQMEKQRRLEQILR 741
M++AT P +R + L NP+ V+ +G D+ A+ IT Y + + + ++
Sbjct: 286 MFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLAD-GITTYSIIADSYGRASIIGPLVT 344
Query: 742 SQERGSKIIIFCSTKRLCDQLARTIGRSFGAAAIHGDKSQGERDYVLGQFRTGKSPILVA 801
+G K I+F TKR D+L+ + RSF A+HGD SQ +R+ L FR G ILVA
Sbjct: 345 EHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGHFNILVA 404
Query: 802 TDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWKHAGDLI 861
TDVAARGLD+ ++ ++I+Y+ P E +VHR A +S QD A +
Sbjct: 405 TDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYS-QDQSRA---V 460
Query: 862 KVLEGANQHVLPELRQIA-SRGPANF 886
K++E EL IA RG A+
Sbjct: 461 KIIEREVGSRFTELPSIAVERGSASM 486
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 237 bits (604), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 125/331 (37%), Positives = 198/331 (59%), Gaps = 10/331 (3%)
Query: 507 GFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQ- 565
G PEI++ + G PIQ A++GRD++ A+TG+GKTL + +P + +
Sbjct: 122 GISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKF 181
Query: 566 --RHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSS-RVSCTCLYGGAPKALQLKELDR 622
+H N P LVLAPTRELA Q+++E F S+ + CLYGG P Q++EL+
Sbjct: 182 NAKHGRGKN-PQCLVLAPTRELARQVEKE---FRESAPSLDTICLYGGTPIGQQMRELNY 237
Query: 623 GAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQTL 682
G ++ V TPGR+ D+++ +N+ +V +VL+EAD+ML +GF + I+ ++P +RQ++
Sbjct: 238 GIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSM 297
Query: 683 MYTATWPKEVRKIASDLLVNPVQVN-IGSVDELAANKSITQYVEVVPQMEKQRRLEQILR 741
M++AT P +R + L NP+ ++ +G D+ A+ IT Y + + +++
Sbjct: 298 MFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLAD-GITMYSIAADSYGRASIIGPLVK 356
Query: 742 SQERGSKIIIFCSTKRLCDQLARTIGRSFGAAAIHGDKSQGERDYVLGQFRTGKSPILVA 801
+G K I+F TKR D+LA + +S+ A+HGD SQ +R+ L FR G ILVA
Sbjct: 357 EHGKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVA 416
Query: 802 TDVAARGLDIKDIRVVINYDFPTGVEDYVHR 832
TDVAARGLD+ ++ +VI+Y+ P E +VHR
Sbjct: 417 TDVAARGLDVPNVDLVIHYELPNNTETFVHR 447
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 237 bits (604), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 130/334 (38%), Positives = 197/334 (58%), Gaps = 14/334 (4%)
Query: 508 FPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQ-- 565
P + + G ++ PIQ ALQGRDI+A AKTG+GKTL + +P L +
Sbjct: 109 LPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 168
Query: 566 ------RHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKE 619
R + L P LVLAPTRELA Q+++E+ + + +S C+YGG +Q
Sbjct: 169 GDYTAFRRSGRL--PKFLVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVSYTIQQSA 224
Query: 620 LDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRR 679
L RG ++VV TPGR+ D++E + + +G+V LVL+EAD+ML +GFE + I+ +P +R
Sbjct: 225 LTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKR 284
Query: 680 QTLMYTATWPKEVRKIASDLLVNPVQVN-IGSVDELAANKSITQYVEVVPQMEKQRRLEQ 738
Q+++++AT P V+K+A L NP+ ++ +G DE A + I Y K+ L
Sbjct: 285 QSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLA-EGIKLYAIATTSTSKRTILSD 343
Query: 739 ILRSQERGSKIIIFCSTKRLCDQLARTIGRSFGAAAIHGDKSQGERDYVLGQFRTGKSPI 798
++ +G K I+F TKR D+++ + S A+HGD SQ +R+ L FR GK +
Sbjct: 344 LITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTV 403
Query: 799 LVATDVAARGLDIKDIRVVINYDFPTGVEDYVHR 832
LVATDVA+RGLDI ++ +VI+Y+ P E +VHR
Sbjct: 404 LVATDVASRGLDIPNVDLVIHYELPNDPETFVHR 437
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 237 bits (604), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 130/334 (38%), Positives = 197/334 (58%), Gaps = 14/334 (4%)
Query: 508 FPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQ-- 565
P + + G ++ PIQ ALQGRDI+A AKTG+GKTL + +P L +
Sbjct: 109 LPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 168
Query: 566 ------RHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKE 619
R + L P LVLAPTRELA Q+++E+ + + +S C+YGG +Q
Sbjct: 169 GDYTAFRRSGRL--PKFLVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVSYTIQQSA 224
Query: 620 LDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRR 679
L RG ++VV TPGR+ D++E + + +G+V LVL+EAD+ML +GFE + I+ +P +R
Sbjct: 225 LTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKR 284
Query: 680 QTLMYTATWPKEVRKIASDLLVNPVQVN-IGSVDELAANKSITQYVEVVPQMEKQRRLEQ 738
Q+++++AT P V+K+A L NP+ ++ +G DE A + I Y K+ L
Sbjct: 285 QSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLA-EGIKLYAIATTSTSKRTILSD 343
Query: 739 ILRSQERGSKIIIFCSTKRLCDQLARTIGRSFGAAAIHGDKSQGERDYVLGQFRTGKSPI 798
++ +G K I+F TKR D+++ + S A+HGD SQ +R+ L FR GK +
Sbjct: 344 LITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTV 403
Query: 799 LVATDVAARGLDIKDIRVVINYDFPTGVEDYVHR 832
LVATDVA+RGLDI ++ +VI+Y+ P E +VHR
Sbjct: 404 LVATDVASRGLDIPNVDLVIHYELPNDPETFVHR 437
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 231 bits (588), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/307 (40%), Positives = 188/307 (61%), Gaps = 14/307 (4%)
Query: 535 ALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQ--------RHNNPLNGPTVLVLAPTRELA 586
ALQGRDI+A AKTG+GKTL + +P L + R + L P LVLAPTRELA
Sbjct: 43 ALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRL--PKFLVLAPTRELA 100
Query: 587 TQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVG 646
Q+++E+ + + +S C+YGG +Q L RG ++VV TPGR+ D++E + + +G
Sbjct: 101 KQVEKEIKE--SAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLG 158
Query: 647 QVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQV 706
+V LVL+EAD+ML +GFE + I+ +P +RQ+++++AT P V+K+A L NP+ +
Sbjct: 159 EVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNI 218
Query: 707 N-IGSVDELAANKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLART 765
+ +G DE A + I Y K+ L ++ +G K I+F TKR D+++
Sbjct: 219 DLVGDQDEKLA-EGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLA 277
Query: 766 IGRSFGAAAIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTG 825
+ S A+HGD SQ +R+ L FR GK +LVATDVA+RGLDI ++ +VI+Y+ P
Sbjct: 278 LSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPND 337
Query: 826 VEDYVHR 832
E +VHR
Sbjct: 338 PETFVHR 344
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 230 bits (586), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 139/411 (33%), Positives = 219/411 (53%), Gaps = 11/411 (2%)
Query: 489 VTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTG 548
V G +PPP +TF + G PP++L + +AG+ PTPIQ Q P AL G+ ++A A TG
Sbjct: 98 VQGQGSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTG 157
Query: 549 SGKTLGYIMPAFSLLRQRH----NNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRVSC 604
SGKT +++P S H ++ P +VLAPTREL Q++++ G+
Sbjct: 158 SGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKT 217
Query: 605 TCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGF 664
+ GG P + QL + +G E+++ TPGR+ D+L I + + VL+E D ML GF
Sbjct: 218 ALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGF 277
Query: 665 EPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYV 724
Q+ +I + + Q L+++AT +EV K+ L + V+IG+ ++ NK++ Q
Sbjct: 278 RDQVMQIFQAL-SQPQVLLFSATISREVEKVGGSLAKEIILVSIGNPNK--PNKAVNQLA 334
Query: 725 EVVPQMEKQRRLEQILRSQERGS-KIIIFCSTKRLCDQLARTIGRSFG--AAAIHGDKSQ 781
V +K+++L ILRSQ +++ S++ D LA I G A +IHG+K
Sbjct: 335 IWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPM 394
Query: 782 GERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXXXX 841
ER V+G F G+ P+LV+T V RG+D+ +R VI +D P+ +++Y+H I
Sbjct: 395 KERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGE 454
Query: 842 XXMAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQIASRGPANFGKDRAG 892
A F +E D DL+ L+ + + EL + SR N K R G
Sbjct: 455 KGTAIVFVNEDDRNLFPDLVAALKSSGAAIPKELINLTSREMHN-KKRRVG 504
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 230 bits (586), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 139/411 (33%), Positives = 219/411 (53%), Gaps = 11/411 (2%)
Query: 489 VTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTG 548
V G +PPP +TF + G PP++L + +AG+ PTPIQ Q P AL G+ ++A A TG
Sbjct: 98 VQGQGSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTG 157
Query: 549 SGKTLGYIMPAFSLLRQRH----NNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRVSC 604
SGKT +++P S H ++ P +VLAPTREL Q++++ G+
Sbjct: 158 SGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKT 217
Query: 605 TCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGF 664
+ GG P + QL + +G E+++ TPGR+ D+L I + + VL+E D ML GF
Sbjct: 218 ALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGF 277
Query: 665 EPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYV 724
Q+ +I + + Q L+++AT +EV K+ L + V+IG+ ++ NK++ Q
Sbjct: 278 RDQVMQIFQAL-SQPQVLLFSATISREVEKVGGSLAKEIILVSIGNPNK--PNKAVNQLA 334
Query: 725 EVVPQMEKQRRLEQILRSQERGS-KIIIFCSTKRLCDQLARTIGRSFG--AAAIHGDKSQ 781
V +K+++L ILRSQ +++ S++ D LA I G A +IHG+K
Sbjct: 335 IWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPM 394
Query: 782 GERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXXXX 841
ER V+G F G+ P+LV+T V RG+D+ +R VI +D P+ +++Y+H I
Sbjct: 395 KERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGE 454
Query: 842 XXMAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQIASRGPANFGKDRAG 892
A F +E D DL+ L+ + + EL + SR N K R G
Sbjct: 455 KGTAIVFVNEDDRNLFPDLVAALKSSGAAIPKELINLTSREMHN-KKRRVG 504
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 219 bits (558), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 209/406 (51%), Gaps = 37/406 (9%)
Query: 512 ILREIYSAGFSN---PTPIQ--AQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQ- 565
I +E ++ + P P++ +T P+ L+ RD++ I+ TGSGKT +++P + + +
Sbjct: 208 IFKEDFNISYRGSKIPHPMRNWEETIPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRL 267
Query: 566 ---RHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKELDR 622
R N GP LV+ PTRELA QI+EE KF R + G Q +L +
Sbjct: 268 PPMREENQTEGPYALVMVPTRELAHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQ 327
Query: 623 GAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPR---- 678
G EIV+ATPGRL D LE + + + Q + LVL+EADRM+DM FEPQ+ ++++ +P
Sbjct: 328 GCEIVIATPGRLLDCLERRYVVLNQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKP 387
Query: 679 -------------RQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYVE 725
R T M++AT V ++A L NPV V IG K ITQ V
Sbjct: 388 EKEDEELEEKKIYRTTYMFSATMLLSVERLARKFLRNPVVVTIGE-----TTKFITQQVI 442
Query: 726 VVPQMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLART---IGRSFGAAAIHGDKSQG 782
+ + +K RL++++ I+F +T+ D + + +GR +H KSQ
Sbjct: 443 MTKESDKFSRLKKLIDDLGDDKTAIVFVNTRNKVDYIVKNLEKVGRC-RVTTLHAGKSQE 501
Query: 783 ERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXXXXX 842
+RDY L +F+ + +LV TDV RGLDI D+ VINYD P ++ Y HRI
Sbjct: 502 QRDYSLEEFKKKRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKT 561
Query: 843 XMAYTFFSEQDWKHAGDLIKVLEGANQHVLPEL-RQIASR-GPANF 886
+A TF + +D L + L N V PEL R AS+ P F
Sbjct: 562 GVATTFLTLEDKDVFYGLKQKLNECNSLVPPELARHEASKFKPGTF 607
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 212 bits (539), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 200/373 (53%), Gaps = 8/373 (2%)
Query: 489 VTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTG 548
V T D I P +F+ G ++LR +Y GF P+ IQ + LQGRD++A A++G
Sbjct: 24 VFETTDGIEP-ITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSG 82
Query: 549 SGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCLY 608
+GKT M A S+ Q + L+L+PTRELATQ ++ + G + +
Sbjct: 83 TGKTS---MIALSVC-QVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACI 138
Query: 609 GGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGFEPQI 668
GG +++L+ G +V TPGR+ D+++ + + + LL+L+E+D ML GF+ QI
Sbjct: 139 GGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQI 198
Query: 669 RKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYVEVVP 728
+ +PP Q + +AT P E+ ++ S + PV++ + DEL + I Q+ V
Sbjct: 199 YDVYRYLPPDLQVCLVSATLPHEILEMTSKFMTEPVKILVKR-DELTL-EGIKQFFVAVE 256
Query: 729 QMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLARTI-GRSFGAAAIHGDKSQGERDYV 787
+ E + L ++ +IFC+TKR D L+ + +F +++HGD Q ERD +
Sbjct: 257 KEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAI 316
Query: 788 LGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXXXXXXMAYT 847
+ +FR+G S +L+ TDV ARG+D++ + +VINYD P E Y+HRI +A
Sbjct: 317 MNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAIN 376
Query: 848 FFSEQDWKHAGDL 860
F D K D+
Sbjct: 377 FVKSDDIKILRDI 389
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 204 bits (519), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 124/343 (36%), Positives = 185/343 (53%), Gaps = 15/343 (4%)
Query: 502 TFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFS 561
TF G E+++ G+ NP+ IQA+ P AL+G+D++ +A+TGSGKT + +P
Sbjct: 10 TFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQ 69
Query: 562 LLRQR--HNNPLNGPT------VLVLAPTRELATQIQEEVFKFGRSSRVSCTCLYGGAPK 613
L + + P G VL+PTRELA QI E+ G + C L GG +
Sbjct: 70 ALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDR 129
Query: 614 ALQLKELDRGAEIVVATPGRLND-ILEMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIV 672
Q L + ++VATPGRL D + + K ++ + LVL+EADR+L+ FE + +I+
Sbjct: 130 MQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQIL 189
Query: 673 NEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYVEVVPQMEK 732
EIP R+T +++AT K+VRK+ L NPV++ S + + ++ Q V K
Sbjct: 190 EEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAAS--KYSTVDTLKQQYRFVAAKYK 247
Query: 733 QRRLEQILRSQERGSKIIIF--CSTKRLCDQLARTIGRSFGAAAIHGDKSQGERDYVLGQ 790
L IL + +I C R + R++G F A I G +Q +R L +
Sbjct: 248 DCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLG--FRAIPISGQMTQSKRLGALNK 305
Query: 791 FRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 833
F+ G+ ILV TDVA+RGLDI + VVINYD PT +DY+HR+
Sbjct: 306 FKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRV 348
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 204 bits (518), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 191/367 (52%), Gaps = 15/367 (4%)
Query: 488 EVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKT 547
+VTAT N F+ E+L IY GF P+PIQ ++ P+AL GRDI+A AK
Sbjct: 124 DVTATKGN------EFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKN 177
Query: 548 GSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCL 607
G+GKT + +P + Q NN + +++ PTRELA Q + + G+ ++
Sbjct: 178 GTGKTAAFCIPVLEKIDQ-DNNVIQA---VIIVPTRELALQTSQVCKELGKHLKIQVMVT 233
Query: 608 YGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGFEPQ 667
GG + L + ++V TPGR+ D+ + + S+LV++EAD++L F+P
Sbjct: 234 TGGTSLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPS 293
Query: 668 IRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYVEVV 727
+ +++ +P RQ LM++AT+P V+ L NP +N+ +DEL K ITQ+ V
Sbjct: 294 VEHLISFLPESRQILMFSATFPVTVKDFKDRFLTNPYVINL--MDELTL-KGITQFYAFV 350
Query: 728 PQMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLARTIGR-SFGAAAIHGDKSQGERDY 786
+ +K L + S+ + ++ IIFC++ + LA+ I + IH Q R+
Sbjct: 351 EERQKIHCLNTLF-SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNR 409
Query: 787 VLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXXXXXXMAY 846
V FR G LV TD+ RG+DI+ + VVIN+DFP E Y+HR+ +A
Sbjct: 410 VFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAV 469
Query: 847 TFFSEQD 853
+ +D
Sbjct: 470 NLITYED 476
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 204 bits (518), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 191/367 (52%), Gaps = 15/367 (4%)
Query: 488 EVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKT 547
+VTAT N F+ E+L IY GF P+PIQ ++ P+AL GRDI+A AK
Sbjct: 124 DVTATKGN------EFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKN 177
Query: 548 GSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCL 607
G+GKT + +P + Q NN + +++ PTRELA Q + + G+ ++
Sbjct: 178 GTGKTAAFCIPVLEKIDQ-DNNVIQA---VIIVPTRELALQTSQVCKELGKHLKIQVMVT 233
Query: 608 YGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGFEPQ 667
GG + L + ++V TPGR+ D+ + + S+LV++EAD++L F+P
Sbjct: 234 TGGTSLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPS 293
Query: 668 IRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYVEVV 727
+ +++ +P RQ LM++AT+P V+ L NP +N+ +DEL K ITQ+ V
Sbjct: 294 VEHLISFLPESRQILMFSATFPVTVKDFKDRFLTNPYVINL--MDELTL-KGITQFYAFV 350
Query: 728 PQMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLARTIGR-SFGAAAIHGDKSQGERDY 786
+ +K L + S+ + ++ IIFC++ + LA+ I + IH Q R+
Sbjct: 351 EERQKIHCLNTLF-SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNR 409
Query: 787 VLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXXXXXXMAY 846
V FR G LV TD+ RG+DI+ + VVIN+DFP E Y+HR+ +A
Sbjct: 410 VFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAV 469
Query: 847 TFFSEQD 853
+ +D
Sbjct: 470 NLITYED 476
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 203 bits (516), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 124/363 (34%), Positives = 196/363 (53%), Gaps = 7/363 (1%)
Query: 499 PFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMP 558
P +FD G ++LR +Y G+ P+ IQ + L+GRD++A A++G+GKT M
Sbjct: 20 PIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTS---MI 76
Query: 559 AFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLK 618
A S+ Q N VLVL+P+RELA+Q ++ + G + + GG +K
Sbjct: 77 AISVC-QIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIK 135
Query: 619 ELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPR 678
+L+RG V TPGR+ D+++ + V LLVL+E+D ML G + QI + +P
Sbjct: 136 KLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHD 195
Query: 679 RQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQ 738
Q + +AT P+E+ ++ + +PV++ + DEL + I QY V + E +
Sbjct: 196 IQVCLISATLPQEILEMTEKFMTDPVRILVKP-DELTL-EGIKQYYVDVDKEEWKFDTLC 253
Query: 739 ILRSQERGSKIIIFCSTKRLCDQLARTIGRS-FGAAAIHGDKSQGERDYVLGQFRTGKSP 797
L + ++ IIFC+T++ D L + S F +++HGDK Q ERD ++ QFR+ KS
Sbjct: 254 DLYGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSR 313
Query: 798 ILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWKHA 857
+L+A+DV ARG+D++ + VINYD P E Y+HRI +A F D K
Sbjct: 314 VLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDL 373
Query: 858 GDL 860
D+
Sbjct: 374 KDI 376
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 197 bits (500), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 135/392 (34%), Positives = 200/392 (51%), Gaps = 34/392 (8%)
Query: 494 DNIPPPFM-TFDATGFPPE----------ILREIYSAGFSNPTPIQAQTWPVALQGRDIV 542
D P PF T D F + +LR + G+ PTPIQA P+AL GRD+
Sbjct: 149 DATPKPFFSTVDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLC 208
Query: 543 AIAKTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRV 602
A A TGSGKT + +P L R VL+L PTRELA QI + + + +
Sbjct: 209 ASAITGSGKTAAFALPTLERLLFRPKRVF-ATRVLILTPTRELAVQIHSMIQNLAQFTDI 267
Query: 603 SCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMK-KINVGQVSLLVLEEADRMLD 661
C + GG Q L +IVVATPGR+ D L +++ +++L+L+EADR+L
Sbjct: 268 KCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQ 327
Query: 662 MGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSIT 721
GF +I ++V P RRQT++++AT +EV+++ L P++ L+A+ S
Sbjct: 328 TGFATEITELVRLCPKRRQTMLFSATMTEEVKELVKLSLNKPLR--------LSADPSAR 379
Query: 722 Q---YVEVVPQMEKQRRLEQ-----ILRSQERGSKIIIFCSTKRLCDQLARTIGRS-FGA 772
+ E V ++ + R Q L ++ SK+IIF TK+ +L G + A
Sbjct: 380 RPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKA 439
Query: 773 AAIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHR 832
A +HG+ +Q +R L FR + L+ATDVAARGLDI ++ VINY P ++ YVHR
Sbjct: 440 AELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHR 499
Query: 833 IXXXXXXXXXXMAYTFFSEQDWKHAGDLIKVL 864
+ A TF ++ D L+KV+
Sbjct: 500 VGRTARAGREGYAVTFVTDSDR----SLLKVI 527
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 195 bits (495), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/330 (36%), Positives = 181/330 (54%), Gaps = 13/330 (3%)
Query: 513 LREIYSA-GFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLL------RQ 565
LRE A G PIQA T+ + L G D+V A+TG GKTL +++P L +
Sbjct: 107 LREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPAKSK 166
Query: 566 RHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKELDRGAE 625
R P+VLVL PTRELA Q+ + +G S +S CLYGG +Q +L RG +
Sbjct: 167 RKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYGGDSYPVQEGKLKRGVD 226
Query: 626 IVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEI--PPRRQTLM 683
IVV TPGR+ D +E + ++ + VL+EAD ML MGF + I+ ++ + QTL+
Sbjct: 227 IVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVEDVELILGKVEDSTKVQTLL 286
Query: 684 YTATWPKEVRKIASDLLV-NPVQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQILRS 742
++AT P V+ I++ L + +++ D++ A+ S+ + R + I+
Sbjct: 287 FSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIAIPCNKAAMARLIPDIISC 346
Query: 743 QERGSKIIIFCSTKRLCDQLARTIGRSFGAAAIHGDKSQGERDYVLGQFRTGKSPILVAT 802
G + IIF TK +L+ G G+ A+HG+ Q +R+ L FR GK LVAT
Sbjct: 347 YSSGGQTIIFAETKVQVSELS---GLLDGSRALHGEIPQSQREVTLAGFRNGKFATLVAT 403
Query: 803 DVAARGLDIKDIRVVINYDFPTGVEDYVHR 832
+VAARGLDI D++++I + P VE Y+HR
Sbjct: 404 NVAARGLDINDVQLIIQCEPPREVEAYIHR 433
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 194 bits (493), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 197/361 (54%), Gaps = 7/361 (1%)
Query: 503 FDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSL 562
F++ P + I G+ PTPIQ +T P+ L G D+VA+A+TGSGKT +++P
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 563 LRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKELDR 622
L+Q + P G L+L+PTR+LA Q + + G+ + + + L GG Q +EL +
Sbjct: 90 LKQ--HVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTK 147
Query: 623 GAEIVVATPGRLNDIL-EMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQT 681
G ++++ATPGRL +L E+ + + V +V +EAD + MGF Q+ +I+ ++ RQT
Sbjct: 148 GPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQT 207
Query: 682 LMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQILR 741
L+++AT P + + A L P V + ++++ + ++ ++ V P+ EK L ++R
Sbjct: 208 LLFSATLPSALAEFAKAGLREPQLVRLDVENKISPDLKLS-FLTVRPE-EKYSALLYLVR 265
Query: 742 SQ-ERGSKIIIFCSTKRLCDQLARTIG-RSFGAAAIHGDKSQGERDYVLGQFRTGKSPIL 799
+ +IF STK + + + + +GD Q R + +FR K+ +L
Sbjct: 266 EHISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARKTMLL 325
Query: 800 VATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWKHAGD 859
+ TD+AARG+DI + VIN+DFP + +VHR+ AY+F + +D + D
Sbjct: 326 IVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVTPEDMPYMLD 385
Query: 860 L 860
L
Sbjct: 386 L 386
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 191 bits (486), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/358 (32%), Positives = 187/358 (52%), Gaps = 15/358 (4%)
Query: 477 LSPAEIYCQQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVAL 536
L P + Q +VTAT N F+ ++LR IY GF P+PIQ ++ P+AL
Sbjct: 136 LPPRDNRYQTEDVTATKGN------EFEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIAL 189
Query: 537 QGRDIVAIAKTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKF 596
G DI+A AK G+GKT + +P + NN + ++L PTRELA Q + +
Sbjct: 190 TGSDILARAKNGTGKTGAFCIPTLEKI-DPENNVIQA---VILVPTRELALQTSQVCKEL 245
Query: 597 GRSSRVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEA 656
+ ++ GG + L + ++V TPGR+ D+ + + ++LV++EA
Sbjct: 246 SKYLKIEVMVTTGGTSLRDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEA 305
Query: 657 DRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAA 716
D++L + F+P I +++ +P RQ LM++AT+P V+ L P +N+ +D+L
Sbjct: 306 DKLLSVEFQPSIEELIQFLPESRQILMFSATFPVTVKSFKDRYLKKPYIINL--MDQLTL 363
Query: 717 NKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLARTIGR-SFGAAAI 775
+TQY V + +K L + S+ + ++ IIFC++ + LA+ I + I
Sbjct: 364 -MGVTQYYAFVEERQKVHCLNTLF-SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYI 421
Query: 776 HGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 833
H Q R+ V FR G LV TD+ RG+DI+ + VVIN+DFP E Y+HR+
Sbjct: 422 HAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRV 479
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 191 bits (486), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/386 (32%), Positives = 199/386 (51%), Gaps = 16/386 (4%)
Query: 481 EIYCQQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRD 540
E+ Q E + D++ +FDA G +LR IY+ GF P+ IQ + +G D
Sbjct: 22 EVLEGQDEFFTSYDDVHE---SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 78
Query: 541 IVAIAKTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSS 600
++ A++G+GKT + S + Q+ + L LVLAPTRELA QI++ + G
Sbjct: 79 VIQQAQSGTGKTATFC----SGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYL 134
Query: 601 RVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRML 660
V GG + L G +VV TPGR+ D+L+ + + + + VL+EAD ML
Sbjct: 135 GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEML 194
Query: 661 DMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSI 720
GF+ QI I +PP+ Q +++AT P E +I + PV++ + DEL
Sbjct: 195 SRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKR-DELTLEGIK 253
Query: 721 TQYVEVVPQMEKQR-RLEQILRSQERG--SKIIIFCSTKRLCDQLARTI-GRSFGAAAIH 776
YV V EK+ +LE + E ++ +IF +T+R D L + R +A H
Sbjct: 254 QFYVNV----EKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATH 309
Query: 777 GDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXX 836
GD Q RD ++ +FR+G S +L+ TD+ ARG+D++ + +VIN+D PT E+Y+HRI
Sbjct: 310 GDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRS 369
Query: 837 XXXXXXXMAYTFFSEQDWKHAGDLIK 862
+A F + D + D+ K
Sbjct: 370 GRFGRKGVAINFVTRDDERMLFDIQK 395
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 190 bits (483), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 197/381 (51%), Gaps = 16/381 (4%)
Query: 486 QHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIA 545
Q E + D++ +FDA G +LR IY+ GF P+ IQ + +G D++ A
Sbjct: 17 QDEFFTSYDDVHE---SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQA 73
Query: 546 KTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRVSCT 605
++G+GKT + S + Q+ + L LVLAPTRELA QI++ + G V
Sbjct: 74 QSGTGKTATFC----SGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVH 129
Query: 606 CLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGFE 665
GG + L G +VV TPGR+ D+L+ + + + + VL+EAD ML GF+
Sbjct: 130 ACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFK 189
Query: 666 PQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYVE 725
QI I +PP+ Q +++AT P E +I + PV++ + DEL YV
Sbjct: 190 DQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKR-DELTLEGIKQFYVN 248
Query: 726 VVPQMEKQR-RLEQILRSQERG--SKIIIFCSTKRLCDQLARTI-GRSFGAAAIHGDKSQ 781
V EK+ +LE + E ++ +IF +T+R D L + R +A HGD Q
Sbjct: 249 V----EKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQ 304
Query: 782 GERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXXXX 841
RD ++ +FR+G S +L+ TD+ ARG+D++ + +VIN+D PT E+Y+HRI
Sbjct: 305 NTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGR 364
Query: 842 XXMAYTFFSEQDWKHAGDLIK 862
+A F + D + D+ K
Sbjct: 365 KGVAINFVTRDDERMLFDIQK 385
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 190 bits (483), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/360 (32%), Positives = 187/360 (51%), Gaps = 7/360 (1%)
Query: 502 TFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFS 561
+FDA P++LR IY+ GF P+ IQ + +G D++ A++G+GKT + S
Sbjct: 42 SFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFC----S 97
Query: 562 LLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKELD 621
+ Q+ + L LVLAPTRELA QI++ + G V GG + L
Sbjct: 98 GVLQQLDISLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQ 157
Query: 622 RGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQT 681
G +VV TPGR+ D+L + + + + VL+EAD ML GF+ QI I +P + Q
Sbjct: 158 SGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQV 217
Query: 682 LMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQILR 741
+++AT P E +I + PV++ + DEL YV V + K L +
Sbjct: 218 GVFSATMPPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNVDKEEWKLETLCDLYE 276
Query: 742 SQERGSKIIIFCSTKRLCDQLARTI-GRSFGAAAIHGDKSQGERDYVLGQFRTGKSPILV 800
+ ++ +IF +T+R D L + R +A HGD Q RD ++ +FR+G S +L+
Sbjct: 277 TLAI-TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 335
Query: 801 ATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWKHAGDL 860
TD+ ARG+D++ + +VIN+D PT E+Y+HRI +A F + +D + D+
Sbjct: 336 TTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERMMADI 395
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 189 bits (481), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 123/376 (32%), Positives = 190/376 (50%), Gaps = 15/376 (3%)
Query: 485 QQHEVTATGDNIPPPFMTFDAT----GFPPEILREIYSAGFSNPTPIQAQTWPVALQGRD 540
+Q+ + +G+NIPPP +F G ILR + GF PTPIQ Q P+ L GR+
Sbjct: 121 KQYSIHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRE 180
Query: 541 IVAIAKTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSS 600
A A TGSGKT +I P L++ + G ++L+P RELA Q E K + S
Sbjct: 181 CFACAPTGSGKTFAFICPMLIKLKRPSTD---GIRAVILSPARELAAQTAREGKKLIKGS 237
Query: 601 RVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRML 660
+ K +L +++++TP RL ++ KKI++ +V LVL+E+D++
Sbjct: 238 NFHIRLMTKPLVKTADFSKL--WCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLF 295
Query: 661 DMGFEPQIRKIVNEIP-PRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKS 719
+ QI +V P +++AT P V ++A ++ + V+V IG + A+++
Sbjct: 296 EQSLLKQIDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRKN--TASET 353
Query: 720 ITQYVEVVPQME-KQRRLEQILRSQERGSKIIIFCSTKRLCDQLARTI-GRSFGAAAIHG 777
+ Q + E K L Q ++ ++IF +K +L + + A IH
Sbjct: 354 VKQKLVFAGSEEGKLLALRQSF-AESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHS 412
Query: 778 DKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXX 837
D GER+ + QFR G+ +L+ATDV ARG+D K I VINYDFP Y+HRI
Sbjct: 413 DLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSG 472
Query: 838 XXXXXXMAYTFFSEQD 853
A TF++EQD
Sbjct: 473 RAGRSGEAITFYTEQD 488
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 189 bits (481), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 192/374 (51%), Gaps = 10/374 (2%)
Query: 481 EIYCQQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRD 540
E+ Q E + D++ +FDA G +LR IY+ GF P+ IQ + +G D
Sbjct: 22 EVLEGQDEFFTSYDDVHE---SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 78
Query: 541 IVAIAKTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSS 600
++ A++G+GKT + S + Q+ + L LVLAPTRELA QI++ + G
Sbjct: 79 VIQQAQSGTGKTATFC----SGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYL 134
Query: 601 RVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRML 660
V GG + L G +VV TPGR+ D+L+ + + + + VL+EAD ML
Sbjct: 135 GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEML 194
Query: 661 DMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSI 720
GF+ QI I +PP+ Q +++AT P E +I + PV++ + DEL
Sbjct: 195 SRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKR-DELTLEGIK 253
Query: 721 TQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLARTI-GRSFGAAAIHGDK 779
YV V + K L + + ++ +IF +T+R D L + R +A HGD
Sbjct: 254 QFYVNVEKEEWKLETLCDLYETLAI-TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDM 312
Query: 780 SQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXX 839
Q RD ++ +FR+G S +L+ TD+ ARG+D++ + +VIN+D PT E+Y+HRI
Sbjct: 313 DQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRF 372
Query: 840 XXXXMAYTFFSEQD 853
+A F + D
Sbjct: 373 GRKGVAINFVTRDD 386
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 189 bits (480), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 187/358 (52%), Gaps = 15/358 (4%)
Query: 477 LSPAEIYCQQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVAL 536
L P + Q +VTAT N F+ ++L+ IY GF P+PIQ ++ P+AL
Sbjct: 106 LPPPDTRYQTADVTATKGN------EFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIAL 159
Query: 537 QGRDIVAIAKTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKF 596
G DI+A AK G+GKT + +P + +NN + ++L PTRELA Q + +
Sbjct: 160 TGSDILARAKNGTGKTGAFCIPVLEKI-DPNNNVIQA---MILVPTRELALQTSQVCKEL 215
Query: 597 GRSSRVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEA 656
+ + GG + L + ++V TPGR+ D+ + + ++LV++EA
Sbjct: 216 SKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEA 275
Query: 657 DRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAA 716
D++L F+P + +++ +P RQ LM++AT+P V+ L P +N+ +D+L
Sbjct: 276 DKLLSAEFQPSLEELIQFLPQNRQFLMFSATFPVTVKAFKDRHLRKPYVINL--MDQLTL 333
Query: 717 NKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLARTIGR-SFGAAAI 775
+TQY V + +K L + S+ + ++ IIFC++ + LA+ I + I
Sbjct: 334 -MGVTQYYAFVEERQKVHCLNTLF-SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYI 391
Query: 776 HGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 833
H Q R+ V +FR G LV TD+ RG+DI+ + VVIN+DFP E Y+HR+
Sbjct: 392 HAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRV 449
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 189 bits (480), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 187/358 (52%), Gaps = 15/358 (4%)
Query: 477 LSPAEIYCQQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVAL 536
L P + Q +VTAT N F+ ++L+ IY GF P+PIQ ++ P+AL
Sbjct: 106 LPPPDTRYQTADVTATKGN------EFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIAL 159
Query: 537 QGRDIVAIAKTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKF 596
G DI+A AK G+GKT + +P + +NN + ++L PTRELA Q + +
Sbjct: 160 TGSDILARAKNGTGKTGAFCIPVLEKI-DPNNNVIQA---MILVPTRELALQTSQVCKEL 215
Query: 597 GRSSRVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEA 656
+ + GG + L + ++V TPGR+ D+ + + ++LV++EA
Sbjct: 216 SKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEA 275
Query: 657 DRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAA 716
D++L F+P + +++ +P RQ LM++AT+P V+ L P +N+ +D+L
Sbjct: 276 DKLLSAEFQPSLEELIQFLPQNRQFLMFSATFPVTVKAFKDRHLRKPYVINL--MDQLTL 333
Query: 717 NKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLARTIGR-SFGAAAI 775
+TQY V + +K L + S+ + ++ IIFC++ + LA+ I + I
Sbjct: 334 -MGVTQYYAFVEERQKVHCLNTLF-SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYI 391
Query: 776 HGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 833
H Q R+ V +FR G LV TD+ RG+DI+ + VVIN+DFP E Y+HR+
Sbjct: 392 HAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRV 449
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 188 bits (478), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/362 (33%), Positives = 187/362 (51%), Gaps = 7/362 (1%)
Query: 502 TFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFS 561
+FDA G +LR IY+ GF P+ IQ + +G D++ A++G+GKT + S
Sbjct: 40 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC----S 95
Query: 562 LLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKELD 621
+ Q+ + L LVLAPTRELA QI++ + G V GG + L
Sbjct: 96 GVLQQLDYALLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQ 155
Query: 622 RGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQT 681
G +VV TPGR+ D+L + + + + VL+EAD ML GF+ QI I +PP+ Q
Sbjct: 156 AGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 215
Query: 682 LMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQILR 741
+++AT P E +I + PV++ + DEL YV V + K L +
Sbjct: 216 GVFSATMPPEALEITRKFMSKPVRILVKR-DELTLEGIKQFYVNVEKEDWKLETLCDLYE 274
Query: 742 SQERGSKIIIFCSTKRLCDQLARTI-GRSFGAAAIHGDKSQGERDYVLGQFRTGKSPILV 800
+ ++ +IF +T+R D L + R +A HGD Q RD ++ +FR+G S +L+
Sbjct: 275 TLAI-TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
Query: 801 ATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWKHAGDL 860
TD+ ARG+D++ + +VIN+D PT E+Y+HRI +A F + D + D+
Sbjct: 334 TTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDI 393
Query: 861 IK 862
K
Sbjct: 394 QK 395
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 187 bits (476), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/370 (32%), Positives = 193/370 (52%), Gaps = 11/370 (2%)
Query: 530 QTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQRHN----NPLNGPTVLVLAPTREL 585
Q P AL G+ ++A A TGSGKT +++P S H+ + P +VLAPTREL
Sbjct: 2 QAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTREL 61
Query: 586 ATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINV 645
Q++++ G+ + GG P + QL + +G E+++ TPGR+ D+L I +
Sbjct: 62 CVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIEL 121
Query: 646 GQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQ 705
+ VL+E D ML GF Q+ +I + + Q L+++AT +EV K+ L +
Sbjct: 122 DNIMTFVLDEVDCMLQRGFRDQVMQIFQAL-SQPQVLLFSATISREVEKVGGSLAKEIIL 180
Query: 706 VNIGSVDELAANKSITQYVEVVPQMEKQRRLEQILRSQERGS-KIIIFCSTKRLCDQLAR 764
V+IG+ ++ NK++ Q V +K+++L ILRSQ +++ S++ D LA
Sbjct: 181 VSIGNPNK--PNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLAN 238
Query: 765 TIGRSFG--AAAIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDF 822
I G A +IHG+K ER V+G F G+ P+LV+T V RG+D+ +R VI +D
Sbjct: 239 AITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDM 298
Query: 823 PTGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQIASRG 882
P+ +++Y+H I A F +E D DL+ L+ + + EL + SR
Sbjct: 299 PSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGAAIPKELINLTSRE 358
Query: 883 PANFGKDRAG 892
N K R G
Sbjct: 359 MHN-KKRRVG 367
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 186 bits (471), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 179/339 (52%), Gaps = 12/339 (3%)
Query: 502 TFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFS 561
TF++ + I GF+ T IQA+ P + G D++ A+TGSGKTL +++PA
Sbjct: 155 TFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVE 214
Query: 562 LLRQRHNNPLNGPTVLVLAPTRELATQ---IQEEVFKFGRSSRVSCTCLYGGAPKALQLK 618
LL + P NG VLV+ PTRELA Q + +E+ K+ + + GG + + +
Sbjct: 215 LLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQ---TVGKVIGGEKRKTEAE 271
Query: 619 ELDRGAEIVVATPGRLNDILE-MKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPP 677
L +G ++VATPGRL D LE + LV++EADR+L+ FE ++KI+N +P
Sbjct: 272 ILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPK 331
Query: 678 RRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYVEVVPQMEKQRRLE 737
RQT +++AT +V +A L +PV +++ + N+ + Q VVP + L
Sbjct: 332 TRQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLL 391
Query: 738 QILRSQERGSKIIIF---CSTKRLCDQLARTIGRSFGAAAIHGDKSQGERDYVLGQFRTG 794
L+ + KI++F C + + +L R I F I G Q +R QF
Sbjct: 392 TFLKRFQGKKKIMVFFSTCKSTKFHAELFRYI--KFDCLEIRGGIDQNKRTPTFLQFIKA 449
Query: 795 KSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 833
++ IL+ T+VAARGLD + ++ YD P DY+HR+
Sbjct: 450 ETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRV 488
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 182 bits (463), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/367 (33%), Positives = 183/367 (49%), Gaps = 28/367 (7%)
Query: 503 FDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSL 562
F+ G + G PTP+Q P L GRD++ +A+TGSGKT + +P +
Sbjct: 60 FEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALP---I 116
Query: 563 LRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKELDR 622
L + +P G LV+ PTRELA Q+ E+ G + C+ + GG Q L
Sbjct: 117 LHRLAEDPY-GVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVS 175
Query: 623 GAEIVVATPGRLNDILEMKKIN-------VGQVSLLVLEEADRMLDMGFEPQIRKIVNEI 675
IV+ TPGR+ +LE N + LVL+EADR+LD+GF+ ++R I +
Sbjct: 176 RPHIVITTPGRIKVLLE----NNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCL 231
Query: 676 PPRRQTLMYTATWPKEVRKI----ASDLLVNPVQVNIGSVDELAANKSITQYVEVVPQME 731
P RQTL+++AT ++ + ++ + +VD ++TQ +
Sbjct: 232 PKSRQTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVD------TLTQQFIFEDKDA 285
Query: 732 KQRRLEQILRSQE-RGSK-IIIFCSTKRLCDQLARTIGR-SFGAAAIHGDKSQGERDYVL 788
K+ L IL E +G + +IF ST R C +L+ + A+H SQ R L
Sbjct: 286 KELYLVHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSAL 345
Query: 789 GQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXXXXXXMAYTF 848
+F++GK PIL+ATDVA+RGLDI + +VINYD P DYVHR+ +A +
Sbjct: 346 SKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSI 405
Query: 849 FSEQDWK 855
+E D K
Sbjct: 406 ITETDVK 412
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 182 bits (461), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 188/356 (52%), Gaps = 36/356 (10%)
Query: 503 FDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSL 562
FD P L+ I AGF T +Q T P+ LQG+DI+A AKTG+GKT+ +++P+
Sbjct: 82 FDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEA 141
Query: 563 L-------RQRHNNPLNGPTVLVLAPTRELATQIQEE---VFKFGRSSRVSCTCLYGGAP 612
+ R + P+ VLV+ PTRELA Q E + K+ S + + GG
Sbjct: 142 VIKAPPASRDNRHPPI---IVLVVCPTRELACQAAAEANILLKYHPS--IGVQVVIGGTK 196
Query: 613 KALQLKELDRG-AEIVVATPGRLNDILEMKK---INVGQVSLLVLEEADRMLDMGFEPQI 668
+ + L + +I+VATPGRL D ++ + V +LVL+EAD +LDMGF +I
Sbjct: 197 LPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRREI 256
Query: 669 RKIVNEIPPRRQTLMYTATWPKEVRKIASDLL------VNPVQVNIG----SVDELAANK 718
+I+ +P +RQT +++AT EVR+I L VN VQ G V ++
Sbjct: 257 ERIIAAVPKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVSQMYMIA 316
Query: 719 SITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLARTIGR-SFGAAAIHG 777
S+ ++ ++ + K+ + + G K+IIFC+T + +A +G+ S IH
Sbjct: 317 SLDRHFSLLYGLLKKHITDNV------GYKVIIFCTTAMVTRLVADLLGKLSLNVREIHS 370
Query: 778 DKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 833
K Q R V +FR KS ILV +DV+ARG+D D+ +V+ P+ E Y+HR+
Sbjct: 371 RKPQSYRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRL 426
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 182 bits (461), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 196/386 (50%), Gaps = 21/386 (5%)
Query: 481 EIYCQQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRD 540
E+ Q E + D++ +FDA G +LR GF P+ IQ + +G D
Sbjct: 22 EVLEGQDEFFTSYDDVHE---SFDAMGLQENLLR-----GFEKPSAIQQRGIVPFCKGLD 73
Query: 541 IVAIAKTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSS 600
++ A++G+GKT + S + Q+ + L LVLAPTRELA QI++ + G
Sbjct: 74 VIQQAQSGTGKTATFC----SGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYL 129
Query: 601 RVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRML 660
V GG + L G +VV TPGR+ D+L+ + + + + VL+EAD ML
Sbjct: 130 GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEML 189
Query: 661 DMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSI 720
GF+ QI I +PP+ Q +++AT P E +I + PV++ + DEL
Sbjct: 190 SRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKR-DELTLEGIK 248
Query: 721 TQYVEVVPQMEKQR-RLEQILRSQERG--SKIIIFCSTKRLCDQLARTI-GRSFGAAAIH 776
YV V EK+ +LE + E ++ +IF +T+R D L + R +A H
Sbjct: 249 QFYVNV----EKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATH 304
Query: 777 GDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXX 836
GD Q RD ++ +FR+G S +L+ TD+ ARG+D++ + +VIN+D PT E+Y+HRI
Sbjct: 305 GDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRS 364
Query: 837 XXXXXXXMAYTFFSEQDWKHAGDLIK 862
+A F + D + D+ K
Sbjct: 365 GRFGRKGVAINFVTRDDERMLFDIQK 390
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 180 bits (457), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 187/356 (52%), Gaps = 36/356 (10%)
Query: 503 FDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSL 562
FD P L+ I AGF T +Q T P+ LQG+D++A AKTG+GKT+ +++PA
Sbjct: 384 FDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEA 443
Query: 563 L-------RQRHNNPLNGPTVLVLAPTRELATQIQEE---VFKFGRSSRVSCTCLYGGAP 612
+ R P+ VLV+ PTRELA+Q E + K+ S + + GG
Sbjct: 444 VIKSPPASRDSRQPPI---IVLVVCPTRELASQAAAEANTLLKYHPS--IGVQVVIGGTK 498
Query: 613 KALQLKELDRG-AEIVVATPGRLNDILEMKK---INVGQVSLLVLEEADRMLDMGFEPQI 668
+ + + +I+VATPGRL D +E + V +LVL+EAD +LDMGF I
Sbjct: 499 LPTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDI 558
Query: 669 RKIVNEIPPRRQTLMYTATWPKEVRKIASDLL------VNPVQVNIGSVDELAANKSITQ 722
+I+ +P +RQT +++AT P+EVR+I L +N VQ G ++ +TQ
Sbjct: 559 ERIIAAVPKQRQTFLFSATVPEEVRQICHVALKRDHEFINCVQEGSGET-----HQKVTQ 613
Query: 723 YVEVVPQMEKQRRLEQILRSQERGS----KIIIFCSTKRLCDQLARTIGR-SFGAAAIHG 777
+ ++ +++ L +L + K+IIFC+T + +A + + S IH
Sbjct: 614 -MYMIASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVREIHS 672
Query: 778 DKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 833
K Q R V +FR K+ ILV +DV+ARG+D D+ +V+ P+ E Y+HR+
Sbjct: 673 RKPQSYRTRVSDEFRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRL 728
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 180 bits (456), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 113/336 (33%), Positives = 178/336 (52%), Gaps = 5/336 (1%)
Query: 501 MTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAF 560
+TFD+ + I GF T IQA + L+G+D++ A+TGSGKTL +++PA
Sbjct: 89 VTFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAV 148
Query: 561 SLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKEL 620
LL + +P NG V+V+ PTRELA Q + + + + + + GG + + + +
Sbjct: 149 ELLFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQRI 208
Query: 621 DRGAEIVVATPGRLNDILEMKKINV-GQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRR 679
G+ +V+ATPGRL D L+ K + + LV++EADR+L+ FE + KI+ +P R
Sbjct: 209 ASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTR 268
Query: 680 QTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQI 739
QT +++AT +V+ +A L +PV V++ N+ + Q VVP ++ L
Sbjct: 269 QTALFSATQTSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGYCVVPSKQRLILLISF 328
Query: 740 LRSQERGSKIIIFCSTKRLCDQLARTIGR--SFGAAAIHGDKSQGERDYVLGQFRTGKSP 797
L+ + KI++F ST + Q I + + IHG Q R F K
Sbjct: 329 LK-KNLNKKIMVFFSTCKSV-QFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKG 386
Query: 798 ILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 833
IL+ TDVAARGLDI + +I YD P +Y+HR+
Sbjct: 387 ILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRV 422
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 178 bits (452), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 184/362 (50%), Gaps = 12/362 (3%)
Query: 502 TFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFS 561
+FDA G +LR GF P+ IQ + +G D++ A++G+GKT + S
Sbjct: 40 SFDAMGLQENLLR-----GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC----S 90
Query: 562 LLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKELD 621
+ Q+ + L LVLAPTRELA QI++ + G V GG + L
Sbjct: 91 GVLQQLDYALLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQ 150
Query: 622 RGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQT 681
G +VV TPGR+ D+L + + + + VL+EAD ML GF+ QI I +PP+ Q
Sbjct: 151 AGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 210
Query: 682 LMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQILR 741
+++AT P E +I + PV++ + DEL YV V + K L +
Sbjct: 211 GVFSATMPPEALEITRKFMSKPVRILVKR-DELTLEGIKQFYVNVEKEDWKLETLCDLYE 269
Query: 742 SQERGSKIIIFCSTKRLCDQLARTI-GRSFGAAAIHGDKSQGERDYVLGQFRTGKSPILV 800
+ ++ +IF +T+R D L + R +A HGD Q RD ++ +FR+G S +L+
Sbjct: 270 TLA-ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 328
Query: 801 ATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWKHAGDL 860
TD+ ARG+D++ + +VIN+D PT E+Y+HRI +A F + D + D+
Sbjct: 329 TTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDI 388
Query: 861 IK 862
K
Sbjct: 389 QK 390
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 191/371 (51%), Gaps = 19/371 (5%)
Query: 491 ATGDNIPPPFMTFDATGF-----PPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIA 545
G+ + ++ ++GF PE+LR I +GF +P+ +Q + P A+ G D++ A
Sbjct: 31 VNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQA 90
Query: 546 KTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGR---SSRV 602
K+G GKT +++ S L+Q +P + LVL TRELA QI E +F ++V
Sbjct: 91 KSGMGKTAVFVL---STLQQIEPSP-GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKV 146
Query: 603 SCTCLYGGAPKALQLKELDRGA--EIVVATPGRLNDILEMKKINVGQVSLLVLEEADRML 660
S YGG + K+L + IVV TPGR+ + K +++ V +L+E D+ML
Sbjct: 147 SV--FYGGVNIKIH-KDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKML 203
Query: 661 D-MGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKS 719
+ + +++I P +Q +M++AT KE+R + + +P+++ + +L +
Sbjct: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 263
Query: 720 ITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLARTIGRSFGAAAIHGDK 779
+ Y+++ +MEK R+L +L + + +I S R + + +F + IH
Sbjct: 264 VQHYIKL-SEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 322
Query: 780 SQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXX 839
SQ ER F+ G ILVATD+ RG+DI+ + +VINYD P + Y+HR+
Sbjct: 323 SQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 382
Query: 840 XXXXMAYTFFS 850
+A TF +
Sbjct: 383 GTKGLAITFVA 393
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 191/371 (51%), Gaps = 19/371 (5%)
Query: 491 ATGDNIPPPFMTFDATGF-----PPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIA 545
G+ + ++ ++GF PE+LR I +GF +P+ +Q + P A+ G D++ A
Sbjct: 31 VNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQA 90
Query: 546 KTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGR---SSRV 602
K+G GKT +++ S L+Q +P + LVL TRELA QI E +F ++V
Sbjct: 91 KSGMGKTAVFVL---STLQQIEPSP-GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKV 146
Query: 603 SCTCLYGGAPKALQLKELDRGA--EIVVATPGRLNDILEMKKINVGQVSLLVLEEADRML 660
S YGG + K+L + IVV TPGR+ + K +++ V +L+E D+ML
Sbjct: 147 SV--FYGGVNIKIH-KDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKML 203
Query: 661 D-MGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKS 719
+ + +++I P +Q +M++AT KE+R + + +P+++ + +L +
Sbjct: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 263
Query: 720 ITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLARTIGRSFGAAAIHGDK 779
+ Y+++ +MEK R+L +L + + +I S R + + +F + IH
Sbjct: 264 VQHYIKL-SEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 322
Query: 780 SQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXX 839
SQ ER F+ G ILVATD+ RG+DI+ + +VINYD P + Y+HR+
Sbjct: 323 SQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 382
Query: 840 XXXXMAYTFFS 850
+A TF +
Sbjct: 383 GTKGLAITFVA 393
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 175 bits (443), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 181/350 (51%), Gaps = 24/350 (6%)
Query: 503 FDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSL 562
FD P L+ I AG+ T +Q T P+ L+G+D++A AKTG+GKT+ +++P+ +
Sbjct: 322 FDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEV 381
Query: 563 LRQRHNNPLNGP-------TVLVLAPTRELATQIQEE---VFKFGRSSRVSCTCLYGGAP 612
+ + +P P LV+ PTRELA Q E + K+ S + + GG
Sbjct: 382 VVK---SPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPS--IGVQVVIGGTR 436
Query: 613 KALQLKELDRG-AEIVVATPGRLNDILEMK---KINVGQVSLLVLEEADRMLDMGFEPQI 668
L+ K + +I+VATPGRL D +E + V +LVL+EAD +LDMGF I
Sbjct: 437 LGLEQKRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDI 496
Query: 669 RKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQ-VNIGSVDELAANKSITQYVEVV 727
+I++ +P RQT +++AT P+EVR+I L + VN + ++ + Q +
Sbjct: 497 ERIISAVPKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHMIA 556
Query: 728 PQMEKQRRLEQILRSQERGS---KIIIFCSTKRLCDQLARTIGR-SFGAAAIHGDKSQGE 783
L +LR G+ K+I+FC+T + +A +G + IH K Q
Sbjct: 557 SLDRHFSLLYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQSY 616
Query: 784 RDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 833
R V +FR K ILV +DV+ARG+D D+ +V+ P E Y+HR+
Sbjct: 617 RTRVSNEFRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRL 666
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 191/358 (53%), Gaps = 20/358 (5%)
Query: 494 DNIPPPFMTFDATGF----PP---EILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAK 546
D+ PP +T F PP +I+ + +GF TP+QA+T P +D+V A
Sbjct: 2 DSSPPKTITKALPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAA 61
Query: 547 TGSGKTLGYIMPAFSLLRQRHNNPLNGPTVL--VLAPTRELATQIQEEVFKFGRSS-RVS 603
TGSGKTL +++P ++R+ ++ P V+ +++PTREL+ QI + F + V+
Sbjct: 62 TGSGKTLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVN 121
Query: 604 CTCLYGGAPKALQLKELDR-GAEIVVATPGRLNDILE-MKKINVGQVSLLVLEEADRMLD 661
L GG + L+ GA +++ TPGRL+D+++ M+ ++ + +L+L+EADR+LD
Sbjct: 122 SVLLVGGREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLD 181
Query: 662 MGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSIT 721
MGF+ Q+ I++ +P +R+T +++AT + V +A L N ++V G+ E + S
Sbjct: 182 MGFQKQVNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNAMEVISGA--ESKSKTSSG 239
Query: 722 QYVEVVPQMEKQRRLEQI-LRSQERGSKIIIFCSTKRLCDQLARTIGR-----SFGAAAI 775
Y E + Q+ + + L + + K+++F T D + + S +
Sbjct: 240 LYCEYLKCEADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFST 299
Query: 776 HGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 833
HG Q RD L F S +L+ TDVAARGLDI I V+ YD P + ++HR+
Sbjct: 300 HGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRV 357
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 167 bits (422), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 186/342 (54%), Gaps = 22/342 (6%)
Query: 511 EILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQRHNNP 570
+I+ + + F TP+QA T P+ +D+ A TGSGKTL +++P +LR+ + P
Sbjct: 26 DIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRSTSFP 85
Query: 571 LNGPTVL--VLAPTRELATQIQEEVFKFGRS-SRVSCTCLYGGAPKALQLKELDR-GAEI 626
V+ +++PTREL+TQI F + + V+ L GG +K ++ G +
Sbjct: 86 PKPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEGCNV 145
Query: 627 VVATPGRLNDILE-MKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQTLMYT 685
++ TPGRL+DI+E M+ ++ + +L+L+EADR+L+MGF+ Q+ I++ +P +R+T +++
Sbjct: 146 LIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQRRTGLFS 205
Query: 686 ATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSIT----------QYVEVVPQMEKQRR 735
AT + V ++A L NPV+V + + + +++ +T +Y+E + +
Sbjct: 206 ATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPSGLHLEYMECEADKKSSQL 265
Query: 736 LEQILRSQERGSKIIIFCSTKRLCDQLARTIG-----RSFGAAAIHGDKSQGERDYVLGQ 790
++ ++++ ++ K+I+F T D + +S IHGD Q RD L
Sbjct: 266 VDLLIKNSDK--KLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHGDMKQNARDKALAS 323
Query: 791 FRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHR 832
F S L+ TDVAARGLDI I V+ YD P + HR
Sbjct: 324 FTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHR 365
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 166 bits (419), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 191/378 (50%), Gaps = 13/378 (3%)
Query: 514 REIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQRHNNPLNG 573
R + A + + T +Q+ P AL GRDI+ A+TGSGKTL +++P L + +P +G
Sbjct: 84 RGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEKLHRERWSPEDG 143
Query: 574 PTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKELDRGAEIVVATPGR 633
++++PTRELA Q + K G+ + S L GG KE I+V PGR
Sbjct: 144 VGCIIISPTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKERVHEMNILVCAPGR 203
Query: 634 -LNDILEMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEV 692
L + E Q+ +L+L+EADR+LD F+ Q+ I++++P RQTL+++AT K+V
Sbjct: 204 LLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPKHRQTLLFSATQTKKV 263
Query: 693 RKIASDLLVNPVQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIIF 752
+ +A L +P +++ + A S+ Q V +VP +K L +++ S+I++F
Sbjct: 264 KDLARLSLRDPEYISVHAEAVTATPTSLMQTVMIVPVEKKLDMLWSFIKTH-LNSRILVF 322
Query: 753 CSTKRLCDQLARTIGR---SFGAAAIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGL 809
STK+ + + ++HG SQ +R V QF + +L TDV ARGL
Sbjct: 323 LSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKRMGVYSQF-IERQSVLFCTDVLARGL 381
Query: 810 DI-KDIRVVINYDFPTGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWKHAGDL------IK 862
D K + V+ D P V Y+HR+ + F + + K L IK
Sbjct: 382 DFDKAVDWVVQVDCPEDVASYIHRVGRTARFYTQGKSLLFLTPSEEKMIEKLQEAKVPIK 441
Query: 863 VLEGANQHVLPELRQIAS 880
+++ NQ + R +A+
Sbjct: 442 LIKANNQKLQEVSRLLAA 459
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 162 bits (411), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 180/352 (51%), Gaps = 27/352 (7%)
Query: 503 FDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSL 562
FD + P L+ + ++G T +Q T L G+D + AKTG+GK++ +++PA
Sbjct: 330 FDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIET 389
Query: 563 LRQRHN-----NPLNGPTVLVLAPTRELATQIQEE---VFKFGRSSRVSCTCLYGGAPKA 614
+ + N N + L+L PTRELA+QI E + KF + L GG
Sbjct: 390 VLKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKF--HDGIGVQTLIGGTRFK 447
Query: 615 LQLKELDRG-AEIVVATPGRLNDILEMKK---INVGQVSLLVLEEADRMLDMGFEPQIRK 670
L + L+ +I++ATPGRL D +E K + + L +++EAD +LD+GF + K
Sbjct: 448 LDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRRDVEK 507
Query: 671 IVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQ----VNIGSVDELAANKSITQYVEV 726
I++ +P +RQ+L+++AT PKEVR+++ +L + +G V+ + + Q V
Sbjct: 508 IIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVE---THDKVRQSCIV 564
Query: 727 VPQMEKQRRLEQILRSQERGS---KIIIFCSTKRLCDQLARTIGR--SFGAAAIHGDKSQ 781
P + +L+ + KII+FCST + L T+ R IH K Q
Sbjct: 565 APHESHFHLVPHLLKEHINNTPDYKIIVFCSTG-MVTSLMYTLLREMKLNVREIHARKPQ 623
Query: 782 GERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 833
R V +F+ ILV +DV+ARG++ D+ +VI P+ E Y+HR+
Sbjct: 624 LHRTRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRL 675
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 160 bits (405), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 180/350 (51%), Gaps = 23/350 (6%)
Query: 503 FDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSL 562
FD + P L+ + ++G T +Q T L G+D + AKTG+GK++ +++PA
Sbjct: 377 FDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIET 436
Query: 563 LRQRHN-----NPLNGPTVLVLAPTRELATQIQEEVFKFGRSSR-VSCTCLYGGAPKALQ 616
+ + N + + VL+L PTRELA+QI E ++ + L GG L
Sbjct: 437 VLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLIGGTRFRLD 496
Query: 617 LKELDRG-AEIVVATPGRLNDILEMKK---INVGQVSLLVLEEADRMLDMGFEPQIRKIV 672
+ L+ +I++ATPGRL D +E K + + L +++EAD +LD+GF+ + KI+
Sbjct: 497 QQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFKRDVEKII 556
Query: 673 NEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQ----VNIGSVDELAANKSITQYVEVVP 728
+ +P +RQ+L+++AT PKEVR+++ +L + +G V+ + + Q V P
Sbjct: 557 DCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVE---THDKVKQSCIVAP 613
Query: 729 QMEKQRRLEQILRSQERGS---KIIIFCSTKRLCDQLARTIGR--SFGAAAIHGDKSQGE 783
+ +L+ KII+FCST + L T+ R IH K Q
Sbjct: 614 HESHFHLVPHLLKEHINNMPDYKIIVFCSTG-MVTSLMYTLLREMKLNVREIHARKPQLH 672
Query: 784 RDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 833
R V +F+ ILV +DV+ARG++ D+ +VI P+ E Y+HR+
Sbjct: 673 RTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRL 722
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 192/412 (46%), Gaps = 60/412 (14%)
Query: 491 ATGDNIPPPFMTFDATGF-----PPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIA 545
G+ + ++ ++GF PE+LR I +GF +P+ +Q + P A+ G D++ A
Sbjct: 31 VNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQA 90
Query: 546 KTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGR---SSRV 602
K+G GKT +++ S L+Q +P + LVL TRELA QI E +F ++V
Sbjct: 91 KSGMGKTAVFVL---STLQQIEPSP-GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKV 146
Query: 603 SCTCLYGGAPKALQLKELDRGA--EIVVATPGRLNDILEMKKINVGQVSLLVLEEADRML 660
S YGG + K+L + IVV TPGR+ + K +++ V +L+E D+ML
Sbjct: 147 S--VFYGGVNIKIH-KDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKML 203
Query: 661 D-MGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLL------------------- 700
+ + +++I P +Q +M++AT KE+R + +
Sbjct: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDGLRTLSGDSVALWWVGF 263
Query: 701 ----------------------VNPVQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQ 738
++P+++ + +L + + Y++ + +MEK R+L
Sbjct: 264 GSGYCVFPRFHRARMGLNVPSNIDPMEIYVDDEAKLTLHGLVQHYIK-LSEMEKNRKLND 322
Query: 739 ILRSQERGSKIIIFCSTKRLCDQLARTIGRSFGAAAIHGDKSQGERDYVLGQFRTGKSPI 798
+L + + +I S R + + +F + IH SQ ER F+ G I
Sbjct: 323 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRI 382
Query: 799 LVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXXXXXXMAYTFFS 850
LVATD+ RG+DI+ + +VINYD P + Y+HR+ +A TF +
Sbjct: 383 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVA 434
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 150 bits (380), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 168/347 (48%), Gaps = 19/347 (5%)
Query: 503 FDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSL 562
F G E++ + PT IQ P ++ + +V + TGSGKTL Y++P L
Sbjct: 114 FQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQL 173
Query: 563 LRQRHNNPLNG-----PTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQL 617
+R+ N P +VL PTREL+ Q+ +R + GG+ Q
Sbjct: 174 MREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSRIRPQE 233
Query: 618 KELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPP 677
L+ ++VV TPGR+ +E + G ++ LVL+EAD M D GF P+IRK + +
Sbjct: 234 DSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAPLNQ 293
Query: 678 RR--------QTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYVEVVPQ 729
R QT++ TAT V+K+ + + ++ + AN + ++++
Sbjct: 294 RALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIAN-ARHDFIKLSGG 352
Query: 730 MEKQRRLEQILR-SQERGSKIIIFCSTKRLCDQLARTIGRS-FGAAAIHGDKSQGERDYV 787
+K L Q+L S +GSK+++FC+T + + + HG+ +R
Sbjct: 353 EDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVEN 412
Query: 788 LGQFR--TGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHR 832
L +F+ G P LV TD+AARGLD+ D+ V+ +DFP DY+HR
Sbjct: 413 LKKFKDEEGDCPTLVCTDLAARGLDL-DVDHVVMFDFPKNSIDYLHR 458
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 146 bits (369), Expect = 7e-35, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 163/317 (51%), Gaps = 14/317 (4%)
Query: 540 DIVAIAKTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGR- 598
D++ AK+G GKT +++ S L+Q +P + LVL TRELA QI E +F
Sbjct: 2 DVICQAKSGMGKTAVFVL---STLQQIEPSP-GQVSALVLCHTRELAYQICNEFVRFSTY 57
Query: 599 --SSRVSCTCLYGGAPKALQLKEL--DRGAEIVVATPGRLNDILEMKKINVGQVSLLVLE 654
++VS YGG + K+L + IVV TPGR+ + K +++ V +L+
Sbjct: 58 LPDTKVSV--FYGGVNIKIH-KDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILD 114
Query: 655 EADRMLD-MGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDE 713
E D+ML+ + +++I P +Q +M++AT KE+R + + +P+++ + +
Sbjct: 115 ECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAK 174
Query: 714 LAANKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKRLCDQLARTIGRSFGAA 773
L + + Y+++ +MEK R+L +L + + +I S R + + +F +
Sbjct: 175 LTLHGLVQHYIKL-SEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSI 233
Query: 774 AIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 833
IH SQ ER F+ G ILVATD+ RG+DI+ + +VINYD P + Y+HR+
Sbjct: 234 CIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRV 293
Query: 834 XXXXXXXXXXMAYTFFS 850
+A TF +
Sbjct: 294 GRAGRFGTKGLAITFVA 310
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 165/326 (50%), Gaps = 42/326 (12%)
Query: 497 PPPFMTFDATGFPP---EILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTL 553
PP F PP +I+ + +GF TP+QA+T P +D+V A TGSGKTL
Sbjct: 14 PPRFSELK----PPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTL 69
Query: 554 GYIMPAFSLLRQRHNNPLNGPTVL--VLAPTRELATQIQEEVFKFGRSSRVSCTCLYGGA 611
+++P ++R+ ++ P V+ +++PTREL+ QI K R+ R+
Sbjct: 70 AFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIH----KVARAVRLDFAKCREVE 125
Query: 612 PKALQLKELDRGAEIVVATPGRLNDILE-MKKINVGQVSLLVLEEADRMLDMGFEPQIRK 670
L+E GA +++ TPGRL+D+++ M+ ++ + +L+L+EADR+LDMGF+ Q+
Sbjct: 126 ADMNTLEE--EGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNY 183
Query: 671 IVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYVEVVPQM 730
I++ +P +R+T +++AT + V +A L NP + A++ +Q V ++
Sbjct: 184 IISRLPKQRRTGLFSATQTQAVADLAKAGLRNPYL-------KCEADQKSSQLVHLLI-- 234
Query: 731 EKQRRLEQILRSQERGSKIIIFCSTKRLCDQLARTIG-----RSFGAAAIHGDKSQGERD 785
+ + K+++F T D I +S HG Q RD
Sbjct: 235 ------------ENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRD 282
Query: 786 YVLGQFRTGKSPILVATDVAARGLDI 811
L F S +L+ TDVAARGLDI
Sbjct: 283 TALASFTEASSGVLLCTDVAARGLDI 308
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 196/405 (48%), Gaps = 47/405 (11%)
Query: 503 FDATGFPPEILREIY-SAGFSNPTPIQAQTWPVALQ--GRDIVAIAKTGSGKTLGYIMPA 559
F+ PE+++ +Y F P+ IQA + P+ + + ++A A GSGKT +++
Sbjct: 93 FEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVLGM 152
Query: 560 FSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCLY----GGAPKAL 615
S R + L P L + PTRELA Q E + K G+ + ++ GAP A
Sbjct: 153 LS----RVDPTLREPQALCICPTRELANQNMEVLQKMGKFTGITAELAVPDSTRGAPAAT 208
Query: 616 QLKELDRGA----EIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDM-GFEPQIRK 670
RGA +V+ TPG L + K++ + + +LV +EAD ML GF K
Sbjct: 209 ------RGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKILVFDEADHMLATDGFRDDSLK 262
Query: 671 IVNEI---PPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYVEVV 727
I+ +I P Q L+++AT+ + V+ + + +P Q+ + D A S+ QY V
Sbjct: 263 IMKDIGRVNPNFQVLLFSATFNETVKDFVARTVKDPNQLFVKRED--LALDSVKQYKVVC 320
Query: 728 PQMEKQRRLE----QILRSQERGSKIIIFCSTKRLCDQLARTIGR-SFGAAAIHGDKSQG 782
P+ +Q ++E QI+ + G + IIF TK ++ + + + ++HG+ ++
Sbjct: 321 PK--EQNKIEVIKDQIMELGDIG-QTIIFVKTKASAQKVHKALAEMGYDVTSVHGNLTES 377
Query: 783 ERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVED-------YVHRIXX 835
+RD ++ +F+ + +L+ATDV ARG D + + +V+NY+ PT E Y+HR+
Sbjct: 378 DRDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPTKYETGEPDYEVYLHRVGR 437
Query: 836 XXXXXXXXMAYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQIAS 880
+ + W +V+E ++ +++I S
Sbjct: 438 AGRFGRKGAVFNLLLDDGWDK-----EVMEKIEKYFEANVKEIKS 477
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 177/395 (44%), Gaps = 61/395 (15%)
Query: 496 IPPPF--MTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTL 553
+ P F +F+ G P +L + GFS PT +Q+ P ++G D V + TGSGKTL
Sbjct: 103 VSPLFSAKSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTL 162
Query: 554 GYIMPAFSLL-------RQRH--NNPLNGPTVLVLAPTRELATQIQEEVFKF-GRSSRVS 603
Y++P S + R H N+ +++AP+REL QI EV K G R
Sbjct: 163 AYLLPILSEIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRM 222
Query: 604 CTCLYGGAPKALQLKELDRGA-EIVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDM 662
L GGA + Q + L + IVV TPGR+ +I + K++ LVL+E D +L
Sbjct: 223 VQQLVGGANRMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSF 282
Query: 663 GFEPQIRKIVNEIPPR--------------RQTLMYTATWPKEVRKIASDLLVNPVQVNI 708
F I +I+ + R RQT++ +AT P V + A PV V
Sbjct: 283 NFREDIHRILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQA 342
Query: 709 GSVDEL-----------------AANKSITQYVEVVP--------------QMEKQRRLE 737
V L A+ I ++ +P +++ RR
Sbjct: 343 NKVTPLDTVQPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCV 402
Query: 738 QILRSQERGSKIIIFCSTKRLCDQLARTIGRSFGAAAIHGDKSQGERDYVLGQFRTGKSP 797
L +Q S I +++L D + + R +A +HGD + R VL +F+ G+
Sbjct: 403 HALDAQ---SVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIK 459
Query: 798 ILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHR 832
+LV +++ARGLD+ + +V+N + PT Y HR
Sbjct: 460 VLVTNELSARGLDVAECDLVVNLELPTDAVHYAHR 494
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 140 bits (354), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 181/390 (46%), Gaps = 77/390 (19%)
Query: 520 GFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQRHNNPLN---GPTV 576
GF PT +QAQ PV L GRD++ A TG+GKT+ Y+ P L Q H+ ++ G
Sbjct: 49 GFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLIHHL-QGHSPKVDRSHGTFA 107
Query: 577 LVLAPTRELATQIQEEVFK-FGRSSRVSCTCLYGGAPKALQLKELDRGAEIVVATPGRLN 635
LV+ PTREL Q+ E + K R + + GG KA + L +G I++ATPGRL
Sbjct: 108 LVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAKEKARLRKGISILIATPGRLL 167
Query: 636 DILEMKKINVGQ-VSLLVLEEADRMLDMGFEPQIRKIV-------------NEIPPR--- 678
D L+ V + + ++ +EAD +L++G+ +I +I+ ++I P+
Sbjct: 168 DHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQIIKLLGSGQNEQGEEDDIVPKGIQ 227
Query: 679 RQTLMYTATWPKEVRKIASDLLVNPVQVNIG--------SVDELAA------------NK 718
+Q L+ +AT +V +A L +PV + + S++ AA NK
Sbjct: 228 KQNLLLSATLNDKVNDLAKLSLDDPVMIGLDNTKLQQNLSIESPAAPDSDAEDMVIHVNK 287
Query: 719 S-------------ITQYVEVVPQMEKQRRLEQILRS---QERGSKIIIFCSTKRLCD-- 760
S + Q VP + L +L++ +E K+++F ST+ D
Sbjct: 288 SANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVLKNLFEREASQKVVVFFSTRDAVDFH 347
Query: 761 -----------------QLARTIGRSFGAAAIHGDKSQGERDYVLGQFRTGKSPILVATD 803
+ + + +HG Q +R G F+T K +L++TD
Sbjct: 348 YSLLSEFQWPPNSETEEEGTKELFLKCKTFRLHGSMEQEDRRSAFGTFKTEKQAVLLSTD 407
Query: 804 VAARGLDIKDIRVVINYDFPTGVEDYVHRI 833
VAARGLD +R +I YD P +YVHR+
Sbjct: 408 VAARGLDFPKVRCIIQYDCPGEATEYVHRV 437
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 189/405 (46%), Gaps = 76/405 (18%)
Query: 500 FMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVA-LQGRDIVAIAKTGSGKTLGYIMP 558
F + + P +++ IY F PT IQ + VA QG+D++ A+TGSGKTL + +P
Sbjct: 189 FSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLP 248
Query: 559 AFS-LLRQRHN----NPLNGPTV-----------LVLAPTRELATQIQEEVFKFGRSSRV 602
LL +R L G L++ PTRELA Q+ E + ++ V
Sbjct: 249 ILQRLLDEREKVGKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNLSV 308
Query: 603 SCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDIL---EMKKINVGQVSLLVLEEADRM 659
+ GG Q + L EIVVATPGRL +++ E + + +S VL+EADRM
Sbjct: 309 KVVPIVGGMFSEKQERRLKEKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRM 368
Query: 660 LDMGFEPQIRKIVNEIP------------------------PRRQTLMYTAT------WP 689
++ G +++ I++ +P +RQT +++AT +
Sbjct: 369 VERGHFRELQSILDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSDFR 428
Query: 690 KEVRKIASDLL------VNPVQV---------NIGSVD----ELAANKSITQYVEVVPQM 730
K++++ +S VN ++V N+ +D + A K +++ +
Sbjct: 429 KKLKRGSSKSKQSSSGEVNSIEVLSERAGMRDNVAIIDLTTTSILAPKIEESFIKC-EEK 487
Query: 731 EKQRRLEQILRSQERGSKIIIFCST---KRLCDQLARTIGRSFGAAAIHGDKSQGERDYV 787
EK L IL +G + I+FC++ R L + +G + + Q R
Sbjct: 488 EKDAYLYYILSVHGQG-RTIVFCTSVTDLRHISGLLKILG--LDVCTLFSEMKQRARLKS 544
Query: 788 LGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHR 832
+ +FR ++ IL+ATD+ ARG+DIK++R +I+Y P E YVHR
Sbjct: 545 IDRFRASENGILIATDLVARGIDIKNVRTIIHYKLPHSAEVYVHR 589
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 136 bits (343), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 174/380 (45%), Gaps = 50/380 (13%)
Query: 502 TFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFS 561
+F+ G ++R + G PT IQ P L+G+D+VA AKTGSGKTL Y++P
Sbjct: 47 SFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQ 106
Query: 562 LLRQRHNNPLN--GPTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCL-YGGAPKALQLK 618
L + P+ +L P+REL Q+ EV RV + + A ++
Sbjct: 107 KLFSADSVSKKKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASDMR 166
Query: 619 ELDRGA-EIVVATPGRL-----NDILEMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIV 672
G EI+V+TP + +LE ++ +S+LVL+EAD +L G+E +R +
Sbjct: 167 NALAGLPEILVSTPACIPKCFAAGVLEPTAVS-ESLSILVLDEADLLLSYGYEDNLRSVT 225
Query: 673 NEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVD--ELAANKSITQYVEVVPQM 730
+ IP R Q L+ +AT +V K+ +L NP+ + + + E A ++ Q+
Sbjct: 226 SIIPRRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDKEEAVPSNVQQFWISCSAQ 285
Query: 731 EKQRRLEQILRSQERGSKIIIFCSTKRLCDQLARTIGRSFG--AAAIHGDKSQGERDYVL 788
+K + +L+ + KI+IF +T + +L + FG +A ++G+ Q R ++L
Sbjct: 286 DKLLHILALLKLEVVQKKILIFINTIDMGFRL-KLFLEKFGIKSAILNGELPQNSRLHIL 344
Query: 789 GQFRTGKSPILVATDV-----------------------------------AARGLDIKD 813
QF G L+ATD RG+D K
Sbjct: 345 EQFNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGIDFKK 404
Query: 814 IRVVINYDFPTGVEDYVHRI 833
+ VIN+D P V Y+HRI
Sbjct: 405 VHTVINFDMPQSVTGYIHRI 424
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 164/359 (45%), Gaps = 28/359 (7%)
Query: 502 TFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFS 561
TF G ++++ + F P IQA + + G+ + ++GSGKTL Y++P
Sbjct: 375 TFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQ 434
Query: 562 LLR----QRHNNPLNG-PTVLVLAPTRELATQIQEEVFKFGRSSR-VSCTCLYGGAPKAL 615
LR Q H+ G P V+VL PT ELA+Q+ +S + GG +
Sbjct: 435 RLREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQRT 494
Query: 616 QLKELDRGAEIVVATPGRLNDILEMKKINVGQVSLLVLEEADRML-DMGFEPQIRKIVNE 674
QL+ L++G ++++ATPGR ++ + + + +L+E D + D FE ++ ++N
Sbjct: 495 QLENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNLINS 554
Query: 675 IPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIG--------SVDELAANKSITQYVEV 726
P Q L TAT P E+ ++ + +V +G +++E + S E
Sbjct: 555 SPVTAQYLFVTATLPLEIYNKLVEVFPD-CEVVMGPRVHRVSNALEEFLVDCSGDDNAEK 613
Query: 727 VPQMEKQRRLEQILRSQERG--SKIIIFCSTKRLCDQLARTIG------RSFGAAAIHGD 778
P+ Q + +L+ E SK IIFC+ C ++ R H
Sbjct: 614 TPETAFQNKKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHVLPFHAA 673
Query: 779 KSQGERDYVLGQFRTGK----SPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRI 833
SQ R + +F + + S LV TD A+RG+D + V+ +DFP +YV R+
Sbjct: 674 LSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYVRRV 732
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 158/356 (44%), Gaps = 38/356 (10%)
Query: 507 GFPPE-ILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQ 565
GF PE IL + GF PT IQ + P GRD + A+TGSGKTL Y++ FSL+
Sbjct: 81 GFVPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFSLI-- 138
Query: 566 RHNNPLNGPT-VLVLAPTRELATQIQEEVFKFGRSSRVS---CTCLYGGAPKALQLKELD 621
NP +++ PTREL Q+ + S + CT + L+ +
Sbjct: 139 ---NPQRSSVQAVIVVPTRELGMQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSW 195
Query: 622 RGAE---IVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGFEP-QIRKIVNEIPP 677
AE I+VAT L +LE + V +LV++E D + + +RK++
Sbjct: 196 LKAEPPAILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSS 255
Query: 678 --RRQTLMYTATWPKEVRKIASDLL------VNPVQVNIGSVDELAANKSITQYVEVVPQ 729
+RQT+ +A+ P+ + D + + V V++ ++ + + + +
Sbjct: 256 CDKRQTVFASASIPQH-KHFVHDCIQQKWTKRDVVHVHVSAI--MPMPLCLLHRFVMCEK 312
Query: 730 MEKQRRLEQILRSQERGSKIIIFC-------------STKRLCDQLARTIGRSFGAAAIH 776
K + L +L S S II ST L + L + S +
Sbjct: 313 TNKHQVLLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLE 372
Query: 777 GDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHR 832
GD + R L + R G +LV+TD+AARG+D+ + + N+D P V DY+HR
Sbjct: 373 GDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHR 428
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 175/423 (41%), Gaps = 77/423 (18%)
Query: 510 PEILREIYSAGFSNPTPIQAQTWPVALQ----GRDIVAIAKTGSGKTLGYIMPAFSLLRQ 565
P++ + + + G S+ P+Q W + RDI + TGSGKTL Y +P LL
Sbjct: 40 PKLKKALENMGISSLFPVQVAVWHETIGPGGFERDICVNSPTGSGKTLSYALPIVQLLAS 99
Query: 566 RHNNPLNGPTVLVLAPTRELATQIQEEVFK-------FGRSSRVSCTCLYGGAPKALQLK 618
R P+ LV+ PTR+LA Q++ +VF S V + + G + ++
Sbjct: 100 R---PVRCLRALVVLPTRDLALQVK-DVFDAIAPAVGLSVGSAVGQSSIAGEISQLIKTP 155
Query: 619 ELDRG---------------AEIVVATPGRLND-ILEMKKINVGQVSLLVLEEADRMLDM 662
+LD G +I+VATPGRL D I K + + LV++E DR+L
Sbjct: 156 KLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLRE 215
Query: 663 GFE---PQIRKIVNE------------IP-----------------------PRRQTLMY 684
++ P + ++ +P PR ++
Sbjct: 216 AYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVL 275
Query: 685 TATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQYVEVVPQM-EKQRRLEQILRSQ 743
+AT ++ K+ L +P+ + G K + + ++ + K L +L+S
Sbjct: 276 SATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEK--LECLRLICETGMKPVYLVALLKSW 333
Query: 744 ERGSKIIIFCS----TKRLCDQLARTIGRSFGAAAIHGDKSQGERDYVLGQFRTGKSPIL 799
E G K IIF S T+RLC L A G +Q R L FR G +L
Sbjct: 334 E-GEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELKAFRKGDIQVL 392
Query: 800 VATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWKHAGD 859
VA+D RG+D+K + VINYD P + ++HR +T S + +
Sbjct: 393 VASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHEVRRFSK 452
Query: 860 LIK 862
L++
Sbjct: 453 LLE 455
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 118/227 (51%), Gaps = 22/227 (9%)
Query: 491 ATGDNIPPPFMTFDATGF-----PPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIA 545
G+ + ++ ++GF PE+LR I +GF +P+ +Q + P A+ G D++ A
Sbjct: 31 VNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQA 90
Query: 546 KTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGR---SSRV 602
K+G GKT +++ S L+Q +P + LVL TRELA QI E +F ++V
Sbjct: 91 KSGMGKTAVFVL---STLQQIEPSP-GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKV 146
Query: 603 SCTCLYGGAPKALQLKELDRGA--EIVVATPGRLNDILEMKKINVGQVSLLVLEEADRML 660
S YGG + K+L + IVV TPGR+ + K +++ V +L+E D+ML
Sbjct: 147 S--VFYGGVNIKIH-KDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKML 203
Query: 661 D-MGFEPQIRKIVNEIPPRRQTLMYTATWPKEVR----KIASDLLVN 702
+ + +++I P +Q +M++AT KE+R K D L N
Sbjct: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDFLEN 250
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 10/218 (4%)
Query: 634 LNDILEMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQTLMY-TATWPKEV 692
+ D LE + ++V S V R+ GF ++ + R LM+ + T E
Sbjct: 244 MQDFLENETVSVRLFSFGVENSEWRLCSFGF-----IVLVWVSMFRAILMFHSKTHIFEE 298
Query: 693 RKIASDLLVNPVQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQILRSQERGSKIIIF 752
++ ++P+++ + +L + + Y+++ +MEK R+L +L + + +I
Sbjct: 299 KRWTR---ISPMEIYVDDEAKLTLHGLVQHYIKL-SEMEKNRKLNDLLDALDFNQVVIFV 354
Query: 753 CSTKRLCDQLARTIGRSFGAAAIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIK 812
S R + + +F + IH SQ ER F+ G ILVATD+ RG+DI+
Sbjct: 355 KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIE 414
Query: 813 DIRVVINYDFPTGVEDYVHRIXXXXXXXXXXMAYTFFS 850
+ +VINYD P + Y+HR+ +A TF +
Sbjct: 415 RVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVA 452
>AT2G28600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:12251845-12254672
FORWARD LENGTH=502
Length = 502
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 139/310 (44%), Gaps = 25/310 (8%)
Query: 572 NGPTVLVLAPTRELATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLKELDRGA-EIVVAT 630
N P +L L P++ A+Q++ V K + + L+ GAP Q+ L E +VAT
Sbjct: 195 NSPFLLYLVPSQSKASQVRS-VCKALKGIGIHTVSLHQGAPLDHQISGLKSVEPEFIVAT 253
Query: 631 PGRLNDILEMKKINVGQVSLLVLEEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPK 690
P RL +I+ +K +++ VSLLV++E + G+ ++ I I + QT+++ ++
Sbjct: 254 PERLLEIVTLKGVDISNVSLLVIDELGSLCSGGYLNAVKSIKQAISSKHQTIVFNNSFSA 313
Query: 691 EVRKIASDLL---VNPVQVNIGSVDELAANKS-ITQYVEVVPQMEKQRRLEQILRSQERG 746
+ L VN V VN + +A+ S ITQ V V EK +L++ + +
Sbjct: 314 SIIPAVQSFLGGSVNRVTVN----ESVASQGSCITQTVSVCASEEK--KLQKFAKHLDSS 367
Query: 747 SKIIIFCSTKRLCDQLARTIGRSFGAAAIHGDKSQGERDYVLGQFRTGKSPILVATDVAA 806
S +I+ TK + + + G D L + + + P VA +
Sbjct: 368 SSKLIYIVTKE------ESFKKIMAILKLKGISVSTSSDSKLSEVKKSRKP--VAHLIDF 419
Query: 807 RGLD---IKDIRVVINYDFPTGVEDYVHRIXXXXXXXXXXMAYTFFSEQDWK--HAGDLI 861
LD ++D V+ DF +E Y + + +++ +E+D AG L+
Sbjct: 420 EQLDTTVMRDSETVLLPDFFPSIEIYTQILTSMARESAHGVLHSYITEKDAASYQAGPLV 479
Query: 862 KVLEGANQHV 871
VLE Q+V
Sbjct: 480 NVLENCGQNV 489
>AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase
L4B | chr1:22431093-22438302 REVERSE LENGTH=1150
Length = 1150
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 161/367 (43%), Gaps = 49/367 (13%)
Query: 488 EVTATGDNIPPPFMTFDATGFPPEILREIYSA-GFSNPT--PIQAQTWPVALQGRDIVAI 544
EV D + ++ FP E+Y+ F N + P Q + + G D+ +
Sbjct: 431 EVIDVTDTESSNDKKWTSSDFPWTKNLEVYNKLVFGNHSFRPNQREIINATMSGCDVFVL 490
Query: 545 AKTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVFKFGRSSRVSC 604
TG GK+L Y +PA L LV++P L + IQ+++ +++ +S
Sbjct: 491 MPTGGGKSLTYQLPAL----------LCAGITLVISP---LVSLIQDQIMNLLQTN-ISA 536
Query: 605 TCLYGGAPKALQLKELDRGA------EIVVATPGRL---NDILEMKKINVGQVSLL---V 652
L G A QL+ L + +++ TP ++ +L +I + SLL V
Sbjct: 537 ASLSAGMEWAEQLEILQELSSEKSKYKLLYVTPEKVAKSESLLRHLEI-LNSRSLLARFV 595
Query: 653 LEEADRMLDMG--FEPQIRK--IVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNI 708
++EA + G F P + ++ + P L TAT V++ + VQ +
Sbjct: 596 IDEAHCVSQWGHDFRPDYQGLGVLKQKFPNIPMLALTATATTSVKE-------DVVQA-L 647
Query: 709 GSVDELAANKSITQ---YVEVVPQMEKQ-RRLEQILRSQERGSKIIIFCSTKRLCDQLAR 764
G V+ + +S + + VVP+ K +++ +R II+C ++ C+++
Sbjct: 648 GLVNCVVFRQSFNRPNLWYSVVPKTNKCLEDIDKFIRENHFDECGIIYCLSRMDCEKVTE 707
Query: 765 TIGRSFG--AAAIHGDKSQGERDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDF 822
+ R FG AA HG G+R +V Q+ + I+ AT G++ D+R VI++
Sbjct: 708 AL-RVFGHKAAFYHGSMDPGKRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSL 766
Query: 823 PTGVEDY 829
P +E Y
Sbjct: 767 PKSIEGY 773
>AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase
(RECQl4A) | chr1:3648032-3654997 REVERSE LENGTH=1188
Length = 1188
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 150/325 (46%), Gaps = 44/325 (13%)
Query: 526 PIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTREL 585
P Q + + G D+ + TG GK+L Y +PA + G LV++P L
Sbjct: 456 PNQREIINATMSGSDVFVLMPTGGGKSLTYQLPAL----------ICGGITLVISP---L 502
Query: 586 ATQIQEEVFKFGRSSRVSCTCLYGGAPKALQLK---ELDR---GAEIVVATPGRL--NDI 637
+ IQ+++ +++ + L G A QLK EL+ +++ TP ++ +D
Sbjct: 503 VSLIQDQIMNLLQAN-IPAASLSAGMEWAEQLKIFQELNSEHSKYKLLYVTPEKVAKSDS 561
Query: 638 L--EMKKINV-GQVSLLVLEEADRMLDMG--FEPQIRK--IVNEIPPRRQTLMYTATWPK 690
L ++ +N G ++ V++EA + G F P + I+ + P L TAT
Sbjct: 562 LLRHLENLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNIPVLALTATATA 621
Query: 691 EVRKIASDLLVNPVQVNIGSVDELAANKSITQ---YVEVVPQMEKQ-RRLEQILRSQERG 746
V++ + VQ +G V+ + +S + + VVP+ +K +++ ++
Sbjct: 622 SVKE-------DVVQA-LGLVNCVVFRQSFNRPNLWYSVVPKTKKCLEDIDKFIKENHFD 673
Query: 747 SKIIIFCSTKRLCDQLARTIGRSFG--AAAIHGDKSQGERDYVLGQFRTGKSPILVATDV 804
II+C ++ C++++ + + FG AA HG +R ++ Q+ + I+ AT
Sbjct: 674 ECGIIYCLSRMDCEKVSERL-QEFGHKAAFYHGSMEPEQRAFIQTQWSKDEINIICATVA 732
Query: 805 AARGLDIKDIRVVINYDFPTGVEDY 829
G++ D+R VI++ P +E Y
Sbjct: 733 FGMGINKPDVRFVIHHSLPKSIEGY 757
>AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2 |
chr1:11232422-11237412 FORWARD LENGTH=705
Length = 705
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 142/326 (43%), Gaps = 30/326 (9%)
Query: 520 GFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVL 579
G S Q + + GRD++ I G GK+L Y +PA L G T LV+
Sbjct: 86 GISKYRANQKEIINAIMTGRDVLVIMAAGGGKSLCYQLPAM----------LRGGTTLVV 135
Query: 580 APTRELATQIQEEVFKFGRS--SRVSCTCLYGGAPKALQLKELDRGAE---IVVATPGRL 634
+P L + IQ++V S T G + K L++G + I+ TP ++
Sbjct: 136 SP---LLSLIQDQVMGLAALGISAYMLTSTSGKENEKFVYKALEKGEDDLKILYVTPEKV 192
Query: 635 ND----ILEMKKI-NVGQVSLLVLEEADRMLDMG--FEPQIR--KIVNEIPPRRQTLMYT 685
+ + +++K N G++SL+ ++EA G F P + I+ P+ + T
Sbjct: 193 SKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSILKTQFPKVPMVALT 252
Query: 686 ATWPKEVRKIASDLLVNPVQVN-IGSVDELAANKSITQYVEVVPQMEKQRRLEQILRSQE 744
AT ++V+ ++L P V + SV+ S+ + V ++ E I S
Sbjct: 253 ATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVREK-SAVGKLVVDEIAEFIRESYS 311
Query: 745 RGSKIIIFCSTKRLCDQLARTI-GRSFGAAAIHGDKSQGERDYVLGQFRTGKSPILVATD 803
I++C +++ C+Q+A + R A H D R+ V ++ K ++V T
Sbjct: 312 NNESGIVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQVIVGTV 371
Query: 804 VAARGLDIKDIRVVINYDFPTGVEDY 829
G++ D+R VI++ +E Y
Sbjct: 372 AFGMGINKPDVRFVIHHSLSKSMETY 397
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 33/195 (16%)
Query: 501 MTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAF 560
+++ + G + + +GF P+ QA P L G+D++ A+TGSGKT GY+ P
Sbjct: 80 VSWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVIVAAETGSGKTHGYLAP-- 137
Query: 561 SLLRQRHNNPLNGPTV-------------LVLAPTRELATQIQEEVFKFGRSS-----RV 602
++ Q N L+ L+L P L Q+ V RV
Sbjct: 138 -IIDQLTNTALDSEVTNREERPFPLKNISLILCPNVMLCEQVVRMVNGLVDEDGNPLLRV 196
Query: 603 SCTCLYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKIN----VGQVSLLVLEEADR 658
C G P DR +I+V+TP L + +E K+ + V +V +EAD
Sbjct: 197 EAVCGSQGWP--------DRLPDIIVSTPAALLNNIEPKRNRRLEFLRCVKYVVFDEADM 248
Query: 659 MLDMGFEPQIRKIVN 673
+L F+ QI +++N
Sbjct: 249 LLCGSFQNQIIRLIN 263
>AT3G05740.1 | Symbols: RECQI1 | RECQ helicase l1 |
chr3:1698180-1701228 FORWARD LENGTH=606
Length = 606
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 144/321 (44%), Gaps = 34/321 (10%)
Query: 526 PIQAQTWPVALQGRDIVAIAKTGSGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTREL 585
P+Q Q +++ +D + TG GK+L Y +PA L +V++P L
Sbjct: 209 PLQHQACRASMERKDCFVLMPTGGGKSLCYQLPA----------TLKAGVTIVISP---L 255
Query: 586 ATQIQEEVFKFGRSSRVSCTCLYG---GAPKALQLKELDR---GAEIVVATPGRL---ND 636
+ IQ+++ + T L + A L+EL R +++ TP ++ +
Sbjct: 256 LSLIQDQIVALNLKFGIPATFLNSQQTSSQAAAVLQELRRDNPSCKLLYVTPEKIAGSSS 315
Query: 637 ILEMKKI--NVGQVSLLVLEEADRMLDMG--FEPQIRKI--VNEIPPRRQTLMYTATWPK 690
LE + G ++ V++EA + G F P R++ + + PR + TAT +
Sbjct: 316 FLETLRCLDRKGLLAGFVVDEAHCVSQWGHDFRPDYRELGCLKQNFPRVPVMALTATATE 375
Query: 691 EVRKIASDLLVNPVQVNIGSVDELAANKSITQYVEVVPQMEKQRRLEQILRSQERGSKII 750
V D+L +++ V +++ ++ +Y +V E ++L+++LR + + I
Sbjct: 376 SV---CQDVL-KSLRIPRAPVLKMSFDRINLKYEVIVKTKEPLKQLQELLRDRFKDQSGI 431
Query: 751 IFCSTKRLCDQLARTIGRSFGAAAI--HGDKSQGERDYVLGQFRTGKSPILVATDVAARG 808
++C +K C +A+ + + H +R V +++TG+ I+ AT G
Sbjct: 432 VYCLSKSECVDVAKFLNEKCKVKTVYYHAGVPAKQRVDVQRKWQTGEVRIVCATIAFGMG 491
Query: 809 LDIKDIRVVINYDFPTGVEDY 829
+D D+R VI+ VE Y
Sbjct: 492 IDKADVRFVIHNTLSKAVESY 512
>AT1G20960.2 | Symbols: emb1507 | U5 small nuclear ribonucleoprotein
helicase, putative | chr1:7302591-7309914 REVERSE
LENGTH=2171
Length = 2171
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 16/171 (9%)
Query: 494 DNIPPPFMTFDATGFPPEILR----EIYSAGFSNPTPIQAQTWPVALQGRDIVAIAK-TG 548
+ PPP D P LR EI F + P+Q Q + V D V +A TG
Sbjct: 1317 EKYPPPTELLDLQPLPVTALRNPNYEILYQDFKHFNPVQTQVFTVLYNTNDNVLVAAPTG 1376
Query: 549 SGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVF--KFGRSSRVSCTC 606
SGKT I F++LR H P V+ +AP +A + Q ++ KFG+ +
Sbjct: 1377 SGKT---ICAEFAILRNHHEGPDATMRVVYIAPLEAIAKE-QFRIWEGKFGKGLGLRVVE 1432
Query: 607 LYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKIN--VGQVSLLVLEE 655
L G AL LK L++G +I+++TP + + + K V QVSL +++E
Sbjct: 1433 LTG--ETALDLKLLEKG-QIIISTPEKWDALSRRWKQRKYVQQVSLFIVDE 1480
>AT1G20960.1 | Symbols: emb1507 | U5 small nuclear ribonucleoprotein
helicase, putative | chr1:7302591-7309914 REVERSE
LENGTH=2171
Length = 2171
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 16/171 (9%)
Query: 494 DNIPPPFMTFDATGFPPEILR----EIYSAGFSNPTPIQAQTWPVALQGRDIVAIAK-TG 548
+ PPP D P LR EI F + P+Q Q + V D V +A TG
Sbjct: 1317 EKYPPPTELLDLQPLPVTALRNPNYEILYQDFKHFNPVQTQVFTVLYNTNDNVLVAAPTG 1376
Query: 549 SGKTLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELATQIQEEVF--KFGRSSRVSCTC 606
SGKT I F++LR H P V+ +AP +A + Q ++ KFG+ +
Sbjct: 1377 SGKT---ICAEFAILRNHHEGPDATMRVVYIAPLEAIAKE-QFRIWEGKFGKGLGLRVVE 1432
Query: 607 LYGGAPKALQLKELDRGAEIVVATPGRLNDILEMKKIN--VGQVSLLVLEE 655
L G AL LK L++G +I+++TP + + + K V QVSL +++E
Sbjct: 1433 LTG--ETALDLKLLEKG-QIIISTPEKWDALSRRWKQRKYVQQVSLFIVDE 1480
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 60.8 bits (146), Expect = 5e-09, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 25/229 (10%)
Query: 626 IVVATPGRLNDILEMKKINVGQVSLLVLEEADRMLDMGFE-PQIRKIVNEIPP--RRQTL 682
I+VAT L +LE + V +LV++E D + + +RK++ +RQT+
Sbjct: 46 ILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSCDKRQTV 105
Query: 683 MYTATWPKEVRKIASDLLVNP------VQVNIGSVDELAANKSITQYVEVVPQMEKQRRL 736
+A+ P+ + D + V V++ ++ + + + + K + L
Sbjct: 106 FASASIPQH-KHFVHDCIQQKWTKRDVVHVHVSAI--MPMPLCLLHRFVMCEKTNKHQVL 162
Query: 737 EQILRSQERGSKIIIFC-------------STKRLCDQLARTIGRSFGAAAIHGDKSQGE 783
+L S S II ST L + L + S + GD +
Sbjct: 163 LALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNS 222
Query: 784 RDYVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHR 832
R L + R G +LV+TD+AARG+D+ + + N+D P V DY+HR
Sbjct: 223 RAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHR 271
>AT2G42270.1 | Symbols: | U5 small nuclear ribonucleoprotein helicase
| chr2:17604330-17610848 FORWARD LENGTH=2172
Length = 2172
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 497 PPPFMTFDATGFPPEILR----EIYSAGFSNPTPIQAQTWPVALQGRD-IVAIAKTGSGK 551
PPP D P LR E F + P+Q Q + V D +V A TGSGK
Sbjct: 1321 PPPTELLDLQPLPVMALRNPSYETLYQDFKHFNPVQTQVFTVLYNTSDNVVVAAPTGSGK 1380
Query: 552 TLGYIMPAFSLLRQRHNNPLNGPTVLVLAPTRELAT-QIQEEVFKFGRSSRVSCTCLYGG 610
T I F++LR P + V+ +AP +A Q ++ KFG+ + L G
Sbjct: 1381 T---ICAEFAILRNHLEGPDSAMRVVYIAPLEAIAKEQFRDWEKKFGKGLGLRVVELTG- 1436
Query: 611 APKALQLKELDRGAEIVVATPGRLNDILEMKKIN--VGQVSLLVLEE 655
L LK L++G +I+++TP + + + K + QVSL +++E
Sbjct: 1437 -ETLLDLKLLEKG-QIIISTPEKWDALSRRWKQRKYIQQVSLFIVDE 1481