Miyakogusa Predicted Gene
- Lj6g3v1559320.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1559320.1 gene.g66357.t1.1
(161 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G16160.1 | Symbols: ATOEP16-2, ATOEP16-S | Mitochondrial impo... 164 2e-41
AT4G16160.2 | Symbols: ATOEP16-2, ATOEP16-S | Mitochondrial impo... 163 4e-41
AT2G28900.1 | Symbols: OEP16, ATOEP16-L, ATOEP16-1, OEP16-1 | ou... 62 1e-10
>AT4G16160.1 | Symbols: ATOEP16-2, ATOEP16-S | Mitochondrial import
inner membrane translocase subunit Tim17/Tim22/Tim23
family protein | chr4:9157545-9158738 FORWARD LENGTH=176
Length = 176
Score = 164 bits (416), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 34/177 (19%)
Query: 12 RALLDKVSSFDKNEGLFNLGHPLLNRIAECFVKAAGIGAVQAVSREG----TRGVDSNNG 67
R ++D++ SF+K LF+LGHPLLNRIA+ FVKAAG+GA+QAVSRE G DSNN
Sbjct: 7 RIVMDEIRSFEKAH-LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGFDSNNV 65
Query: 68 SIPPELSGAKKNHLPGLR---------------------GVAAGIYSGLTYGLKEAR-GA 105
P E++G KK+ P LR G+AAG+YSG+TYG+ E R GA
Sbjct: 66 GPPSEITGNKKHRFPNLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGA 125
Query: 106 HDWVVLLFWKNSAVAGAITGASLALTL-EDVSHDQIVQCAITGAAISTAANLLTGIF 161
HD W+NSAVAGA+TGA++A+T E SH+Q+VQ A+TGAAISTAANLL+ +F
Sbjct: 126 HD------WRNSAVAGALTGAAMAMTTSERTSHEQVVQSALTGAAISTAANLLSSVF 176
>AT4G16160.2 | Symbols: ATOEP16-2, ATOEP16-S | Mitochondrial import
inner membrane translocase subunit Tim17/Tim22/Tim23
family protein | chr4:9157545-9158738 FORWARD LENGTH=178
Length = 178
Score = 163 bits (413), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 119/179 (66%), Gaps = 36/179 (20%)
Query: 12 RALLDKVSSFDKNEGLFNLGHPLLNRIAECFVKAAGIGAVQAVSREGT------RGVDSN 65
R ++D++ SF+K LF+LGHPLLNRIA+ FVKAAG+GA+QAVSRE G DSN
Sbjct: 7 RIVMDEIRSFEKAH-LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSN 65
Query: 66 NGSIPPELSGAKKNHLPGLR---------------------GVAAGIYSGLTYGLKEAR- 103
N P E++G KK+ P LR G+AAG+YSG+TYG+ E R
Sbjct: 66 NVGPPSEITGNKKHRFPNLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRG 125
Query: 104 GAHDWVVLLFWKNSAVAGAITGASLALTL-EDVSHDQIVQCAITGAAISTAANLLTGIF 161
GAHD W+NSAVAGA+TGA++A+T E SH+Q+VQ A+TGAAISTAANLL+ +F
Sbjct: 126 GAHD------WRNSAVAGALTGAAMAMTTSERTSHEQVVQSALTGAAISTAANLLSSVF 178
>AT2G28900.1 | Symbols: OEP16, ATOEP16-L, ATOEP16-1, OEP16-1 | outer
plastid envelope protein 16-1 | chr2:12414423-12415459
REVERSE LENGTH=148
Length = 148
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 8/130 (6%)
Query: 29 NLGHPLLNRIAECFVKAAGIGAVQAVSREGTRGVDSNNGSIPPELSGAKKNHLPGLR-GV 87
++G+P LN + F+K +G ++++ + + +D + S KK G+ G
Sbjct: 20 DMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAIDKGSLSKSTLEHALKKLCKEGVYWGA 79
Query: 88 AAGIYSGLTYGLKEARGAHDWVVLLFWKNSAVAGAITGASLALTLEDVSHDQIVQCAITG 147
A G+Y G YG++ RG+ D WKN+ +AGA TGA L+ + D IV AI G
Sbjct: 80 AGGVYIGTEYGIERIRGSRD------WKNAMLAGAATGAVLS-AVGKKGKDTIVIDAILG 132
Query: 148 AAISTAANLL 157
A++TA+ +
Sbjct: 133 GALATASQFV 142