Miyakogusa Predicted Gene

Lj6g3v1559300.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1559300.1 tr|G7IG10|G7IG10_MEDTR Serine/threonine protein
phosphatase 4 regulatory subunit OS=Medicago truncat,80.93,0,ATP
SYNTHASE GAMMA-RELATED,NULL; PH domain-like,NULL; SMK-1,Domain of
unknown function DUF625,CUFF.59619.1
         (407 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G06670.1 | Symbols:  | binding | chr3:2105908-2113136 REVERSE...   623   e-179
AT3G06670.2 | Symbols:  | binding | chr3:2105908-2113136 REVERSE...   610   e-175
AT5G49380.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Protein of...   209   3e-54
AT5G49370.1 | Symbols:  | Pleckstrin homology (PH) domain superf...   124   1e-28

>AT3G06670.1 | Symbols:  | binding | chr3:2105908-2113136 REVERSE
           LENGTH=865
          Length = 865

 Score =  623 bits (1607), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 296/409 (72%), Positives = 350/409 (85%), Gaps = 7/409 (1%)

Query: 1   MVGPEKSQ-------RVKVYRLNDDGKWDDQGTGLATVEFLERSEELGLYVYDEDDNDII 53
           M  PEKSQ       RVKVY LN+DGKWDD+GTG  +++F+ERSEEL L V DE+DN+ +
Sbjct: 1   MGAPEKSQSNTNSMQRVKVYHLNEDGKWDDRGTGHVSIDFVERSEELSLCVIDEEDNETL 60

Query: 54  LLNRISSEDIYRKQEDTIISWRDPEFATELALSFQEPDGCAYIWDQICNVQRNMQFNTLN 113
           L++ I+ EDIYRKQEDTIISWRDPE +TELALSFQE  GC+Y+WDQIC +QRN+ F++LN
Sbjct: 61  LVHPINPEDIYRKQEDTIISWRDPERSTELALSFQETAGCSYVWDQICTMQRNLHFSSLN 120

Query: 114 SDAFHSVNSELRELPAVVLSTLPLILKIVVENGIAEQLRLTELVLSDQDFFRKLIEVFRV 173
           S+ FHS+NSELRELPAV L+TLPLILKIV E+GI +Q+RLTEL+L D DFFR L+ VF++
Sbjct: 121 SETFHSLNSELRELPAVELTTLPLILKIVTESGITDQMRLTELILKDHDFFRNLMGVFKI 180

Query: 174 CEDLEDMDSLHMIFKIIKGIILLNSTQIFERIFSDEFIMDIIGALEYDPEVPHVQHHRKF 233
           CEDLE++D LHMIF I+KGIILLNS+QI E+IF DE IM+IIG LEYDP VPH QHHR F
Sbjct: 181 CEDLENVDGLHMIFNIVKGIILLNSSQILEKIFGDELIMEIIGCLEYDPGVPHSQHHRNF 240

Query: 234 LQEHAIFKEAIPIKNSVVLSKIHQTYRIGFLKDVVLARVLDEATAANLNSIIHGNNATVV 293
           L+EH +FKEAIPIK+ +VLSKIHQTYRIG+LKDVVLARVLD+A  ANLNS+IH NNA VV
Sbjct: 241 LKEHVVFKEAIPIKDPLVLSKIHQTYRIGYLKDVVLARVLDDAIVANLNSVIHANNAIVV 300

Query: 294 SLLKDDNTFIQELFARLKSPTTSPESKKNMVHFLYEFCGLSKSLQMVQQHRLFRDLMNEG 353
           SLLKDD+TFIQELFARL+SP+TS ESKKN+V+FL+EFC LSKSLQ+VQQ RLFRDL+NEG
Sbjct: 301 SLLKDDSTFIQELFARLRSPSTSMESKKNLVYFLHEFCSLSKSLQVVQQLRLFRDLINEG 360

Query: 354 IFDIVTDVLQSQDKKLVLTGTDILILFMNQDPNLLRSYVVRQEGITLYA 402
           IF ++ +VLQ  DKKLVLTGTDILILF+ QDPNLLRSYVVR EG  L  
Sbjct: 361 IFHVIEEVLQIPDKKLVLTGTDILILFLTQDPNLLRSYVVRTEGNPLLG 409


>AT3G06670.2 | Symbols:  | binding | chr3:2105908-2113136 REVERSE
           LENGTH=886
          Length = 886

 Score =  610 bits (1574), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 296/428 (69%), Positives = 350/428 (81%), Gaps = 28/428 (6%)

Query: 1   MVGPEKSQ-------RVKVYRLNDDGKWDDQGTGLATVEFLERSEELGLYVYDEDDNDII 53
           M  PEKSQ       RVKVY LN+DGKWDD+GTG  +++F+ERSEEL L V DE+DN+ +
Sbjct: 1   MGAPEKSQSNTNSMQRVKVYHLNEDGKWDDRGTGHVSIDFVERSEELSLCVIDEEDNETL 60

Query: 54  LLNRISSEDIYRKQEDTIISWRDPEFATELALSFQEPDGCAYIWDQICNVQRNMQFNTLN 113
           L++ I+ EDIYRKQEDTIISWRDPE +TELALSFQE  GC+Y+WDQIC +QRN+ F++LN
Sbjct: 61  LVHPINPEDIYRKQEDTIISWRDPERSTELALSFQETAGCSYVWDQICTMQRNLHFSSLN 120

Query: 114 SDAFHSVNSELRELPAVVLSTLPLILKIVVENGIAEQLRLTELVLSDQDFFRKLIEVFRV 173
           S+ FHS+NSELRELPAV L+TLPLILKIV E+GI +Q+RLTEL+L D DFFR L+ VF++
Sbjct: 121 SETFHSLNSELRELPAVELTTLPLILKIVTESGITDQMRLTELILKDHDFFRNLMGVFKI 180

Query: 174 CEDLEDMDSLHMIFKIIKGIILLNSTQIFERIFSDEFIMDIIGALEYDPEVPHVQHHRKF 233
           CEDLE++D LHMIF I+KGIILLNS+QI E+IF DE IM+IIG LEYDP VPH QHHR F
Sbjct: 181 CEDLENVDGLHMIFNIVKGIILLNSSQILEKIFGDELIMEIIGCLEYDPGVPHSQHHRNF 240

Query: 234 LQEHAIFKE---------------------AIPIKNSVVLSKIHQTYRIGFLKDVVLARV 272
           L+EH +FKE                     AIPIK+ +VLSKIHQTYRIG+LKDVVLARV
Sbjct: 241 LKEHVVFKERQSHVFFVRKEHAHYGCFGISAIPIKDPLVLSKIHQTYRIGYLKDVVLARV 300

Query: 273 LDEATAANLNSIIHGNNATVVSLLKDDNTFIQELFARLKSPTTSPESKKNMVHFLYEFCG 332
           LD+A  ANLNS+IH NNA VVSLLKDD+TFIQELFARL+SP+TS ESKKN+V+FL+EFC 
Sbjct: 301 LDDAIVANLNSVIHANNAIVVSLLKDDSTFIQELFARLRSPSTSMESKKNLVYFLHEFCS 360

Query: 333 LSKSLQMVQQHRLFRDLMNEGIFDIVTDVLQSQDKKLVLTGTDILILFMNQDPNLLRSYV 392
           LSKSLQ+VQQ RLFRDL+NEGIF ++ +VLQ  DKKLVLTGTDILILF+ QDPNLLRSYV
Sbjct: 361 LSKSLQVVQQLRLFRDLINEGIFHVIEEVLQIPDKKLVLTGTDILILFLTQDPNLLRSYV 420

Query: 393 VRQEGITL 400
           VR EG  L
Sbjct: 421 VRTEGNPL 428


>AT5G49380.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Protein of
           unknown function DUF625 (InterPro:IPR006887); BEST
           Arabidopsis thaliana protein match is: binding
           (TAIR:AT3G06670.1); Has 1807 Blast hits to 1807 proteins
           in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
           Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
           - 339 (source: NCBI BLink). | chr5:20025565-20027078
           FORWARD LENGTH=218
          Length = 218

 Score =  209 bits (532), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 108/191 (56%), Positives = 143/191 (74%), Gaps = 3/191 (1%)

Query: 139 LKIVVENGIAEQLRLTELVLSDQDFFRKLIEVFRVCEDLEDMDSLHMIFKIIKGIILLNS 198
           L++V + G  +Q+RLTEL+L +  FF+KLI+VF  CE+ +D+D LHM+F I+K II +N+
Sbjct: 8   LQVVADYGNTDQMRLTELMLKNGAFFQKLIDVFDDCENRKDIDGLHMMFNIVKEIISVNN 67

Query: 199 TQIFERIFSDEFIMDIIGALEYDPEVPHVQHHRKFLQEHAIFKEAIPIKNSVVLSKIHQT 258
            QI E I  D+  M I G LEYDP+VP  + HR  L+++ +F E IPIKN +VLSKIHQT
Sbjct: 68  YQILEIILGDQLFMKIFGCLEYDPDVPQSKDHRTSLRKNVVFVEDIPIKNPLVLSKIHQT 127

Query: 259 YRIGFLKDVVLARVLDEATAANLNSIIHGNNATVVSLLKDDNTFIQELFARLKSPTTSPE 318
           YRI FLKDVVL  VLD AT+A L+S+I+ N ATV++LLKDD   IQE FARL+SP+TS E
Sbjct: 128 YRIDFLKDVVLTDVLDVATSAFLDSVINANKATVLTLLKDD---IQESFARLRSPSTSDE 184

Query: 319 SKKNMVHFLYE 329
           S+ N+V  L+E
Sbjct: 185 SRNNLVFPLHE 195


>AT5G49370.1 | Symbols:  | Pleckstrin homology (PH) domain
           superfamily protein | chr5:20023714-20024530 FORWARD
           LENGTH=100
          Length = 100

 Score =  124 bits (311), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 54/90 (60%), Positives = 73/90 (81%)

Query: 8   QRVKVYRLNDDGKWDDQGTGLATVEFLERSEELGLYVYDEDDNDIILLNRISSEDIYRKQ 67
           QRVKVYRLN+DG+WDD+GTG  T++++ERSE   LYV DEDDN  +L +RIS ++IY++Q
Sbjct: 11  QRVKVYRLNEDGQWDDKGTGHITMDYMERSEVFNLYVIDEDDNATLLAHRISIDNIYKQQ 70

Query: 68  EDTIISWRDPEFATELALSFQEPDGCAYIW 97
           +D+IISW DP+ + +LALSFQE  GC  +W
Sbjct: 71  DDSIISWIDPQHSAQLALSFQETAGCTIVW 100