Miyakogusa Predicted Gene

Lj6g3v1538090.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1538090.1 Non Chatacterized Hit- tr|B8LMP5|B8LMP5_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,39.84,6e-19,seg,NULL,CUFF.59589.1
         (221 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G49350.2 | Symbols:  | Glycine-rich protein family | chr5:200...   146   1e-35
AT5G49350.1 | Symbols:  | Glycine-rich protein family | chr5:200...   146   1e-35
AT1G56320.1 | Symbols:  | BEST Arabidopsis thaliana protein matc...   115   2e-26

>AT5G49350.2 | Symbols:  | Glycine-rich protein family |
           chr5:20009834-20011095 REVERSE LENGTH=225
          Length = 225

 Score =  146 bits (368), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 66/127 (51%), Positives = 94/127 (74%), Gaps = 1/127 (0%)

Query: 89  DPSQIVTKALLCFNDKYIYQSCEESYRLNENGNLEVPTEKTDEFCEGPCLSETNLVLSCI 148
           DP +IV KAL C N+K+IY+ C+ES+RL  NG+L +P  +T+EFCEGPC SET+L L+CI
Sbjct: 99  DPPEIVAKALECLNEKHIYRECDESWRLTLNGDLNIPLGRTEEFCEGPCFSETHLALNCI 158

Query: 149 DNIFSHFIFYNRATIQDIKETVQAGCGYGPQRGNFDVSEHLQAEESKAL-KATTTTSHVV 207
           + I  H+ F+NRATI DI+ET+++GC YGP+RG F+V EH++ EE  A  K  +    ++
Sbjct: 159 EEIIHHYRFFNRATIHDIRETLKSGCSYGPERGVFNVLEHIEDEEENASEKIKSRFGPLL 218

Query: 208 MGIALVI 214
             IAL++
Sbjct: 219 FIIALLL 225


>AT5G49350.1 | Symbols:  | Glycine-rich protein family |
           chr5:20009834-20011095 REVERSE LENGTH=302
          Length = 302

 Score =  146 bits (368), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 66/127 (51%), Positives = 94/127 (74%), Gaps = 1/127 (0%)

Query: 89  DPSQIVTKALLCFNDKYIYQSCEESYRLNENGNLEVPTEKTDEFCEGPCLSETNLVLSCI 148
           DP +IV KAL C N+K+IY+ C+ES+RL  NG+L +P  +T+EFCEGPC SET+L L+CI
Sbjct: 176 DPPEIVAKALECLNEKHIYRECDESWRLTLNGDLNIPLGRTEEFCEGPCFSETHLALNCI 235

Query: 149 DNIFSHFIFYNRATIQDIKETVQAGCGYGPQRGNFDVSEHLQAEESKAL-KATTTTSHVV 207
           + I  H+ F+NRATI DI+ET+++GC YGP+RG F+V EH++ EE  A  K  +    ++
Sbjct: 236 EEIIHHYRFFNRATIHDIRETLKSGCSYGPERGVFNVLEHIEDEEENASEKIKSRFGPLL 295

Query: 208 MGIALVI 214
             IAL++
Sbjct: 296 FIIALLL 302


>AT1G56320.1 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: Glycine-rich protein family (TAIR:AT5G49350.2); Has
           60 Blast hits to 60 proteins in 12 species: Archae - 0;
           Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60;
           Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
           | chr1:21085722-21086459 REVERSE LENGTH=163
          Length = 163

 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 70/99 (70%)

Query: 93  IVTKALLCFNDKYIYQSCEESYRLNENGNLEVPTEKTDEFCEGPCLSETNLVLSCIDNIF 152
           +V +A  CFN+  +Y+ C E++RLN+ G  +VP E+TD FC GPC +ET LVL+CI+++ 
Sbjct: 39  LVQRAAFCFNNNLLYRGCNEAFRLNQQGEFKVPPEETDRFCNGPCSAETELVLTCINSVM 98

Query: 153 SHFIFYNRATIQDIKETVQAGCGYGPQRGNFDVSEHLQA 191
           S F+FYNRAT +D++  ++ GC     RGNF+V ++ Q 
Sbjct: 99  SDFVFYNRATPRDVRNALRGGCSSSFTRGNFNVGDYAQG 137