Miyakogusa Predicted Gene

Lj6g3v1513560.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1513560.1 Non Chatacterized Hit- tr|A5C109|A5C109_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,56.25,0,seg,NULL; no description,START-like domain;
BETALLERGEN,Bet v I type allergen; Bet v1-like,NULL; Bet,CUFF.59557.1
         (160 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G24020.2 | Symbols: MLP423 | MLP-like protein 423 | chr1:8500...    49   1e-06
AT1G24020.1 | Symbols: MLP423 | MLP-like protein 423 | chr1:8500...    49   1e-06

>AT1G24020.2 | Symbols: MLP423 | MLP-like protein 423 |
          chr1:8500653-8501458 REVERSE LENGTH=155
          Length = 155

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 15 SPARLFKALAIDAHNLIPKLLPQAVKSIEFIQGDGGA-GSIFQVNFIEGSQ-VKTLVNRV 72
          SPA  F     D  NL PK  P   K+I+ + GDG A GSI  + + EGS  VK    R+
Sbjct: 15 SPAEKFWVALGDGINLFPKAFPNDYKTIQVLAGDGNAPGSIRLITYGEGSPLVKISAERI 74

Query: 73 DEINEDTFTYNYTLIEGETLK 93
          + ++ +  + +Y++I GE L+
Sbjct: 75 EAVDLENKSMSYSIIGGEMLE 95


>AT1G24020.1 | Symbols: MLP423 | MLP-like protein 423 |
          chr1:8500653-8501458 REVERSE LENGTH=155
          Length = 155

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 15 SPARLFKALAIDAHNLIPKLLPQAVKSIEFIQGDGGA-GSIFQVNFIEGSQ-VKTLVNRV 72
          SPA  F     D  NL PK  P   K+I+ + GDG A GSI  + + EGS  VK    R+
Sbjct: 15 SPAEKFWVALGDGINLFPKAFPNDYKTIQVLAGDGNAPGSIRLITYGEGSPLVKISAERI 74

Query: 73 DEINEDTFTYNYTLIEGETLK 93
          + ++ +  + +Y++I GE L+
Sbjct: 75 EAVDLENKSMSYSIIGGEMLE 95