Miyakogusa Predicted Gene

Lj6g3v1467190.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1467190.1 tr|B9HHC8|B9HHC8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_763865 PE=4 SV=1,57.89,1e-17,E
set domains,Immunoglobulin E-set; no description,Immunoglobulin-like
fold; Filamin,Filamin/ABP280 ,CUFF.59519.1
         (428 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G49150.1 | Symbols: ATGEX2, GEX2 | gamete expressed 2 | chr5:...   524   e-149

>AT5G49150.1 | Symbols: ATGEX2, GEX2 | gamete expressed 2 |
           chr5:19924760-19928527 FORWARD LENGTH=914
          Length = 914

 Score =  524 bits (1350), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 251/420 (59%), Positives = 318/420 (75%)

Query: 1   MDSYLNPVLSQQSKLKLEIASINISRFSTWDTVDNKDGSYSCSYMAKDVGTYEICPSFDG 60
           +D + NPV SQ S+LK EI S N S F+TW+ VDN DG+Y+ SY+A +VGTY +C SFD 
Sbjct: 414 LDGFYNPVPSQPSRLKFEITSANTSSFTTWEFVDNNDGTYTGSYLAMEVGTYRMCISFDN 473

Query: 61  KRFLACPLSINVYSSEYFPKANNDTVSIWEDESIAIDVLANDYFAGDNARIVEFSKSDHG 120
           K    CP  +NVYS+ YFP+A +D V++WEDESI+ + L NDYFAGDNA ++ FS+  HG
Sbjct: 474 KHIQPCPFDVNVYSNGYFPRAYDDPVNVWEDESISFNPLENDYFAGDNASMLGFSQPGHG 533

Query: 121 SLIQNGRIFRYTPYEDYYGNDYFWYTISDINGNLATASVHISVLNIPPQFASAPSQLQAT 180
           SL+++G + RYTP +++ GND F YTI+DINGNLA A+V+I VL  PPQF S    LQAT
Sbjct: 534 SLLRDGNLLRYTPMKNFSGNDSFLYTIADINGNLAAATVYIFVLTAPPQFVSFSGGLQAT 593

Query: 181 EDLISPRFGGFSGFEITYSNPKESISVNLSALSGSILLSPLVMQFGQPVWNELSINTGNE 240
           EDLISPR+GGFSG EI+YS+  E+ISV + ALSGS++LSP++MQF  P   +LS++ G E
Sbjct: 594 EDLISPRYGGFSGLEISYSDLLENISVMVQALSGSVILSPMLMQFRPPGSGKLSVSNGGE 653

Query: 241 TATSLLLEGTVEEINFALQSIQYLGNENFYGADTIKVSAKNKNGINSLGVPIFVDPINDP 300
               L+LEG V  IN ALQSIQYLGNENF G D++++S KNKNGIN L VP+FV+P+NDP
Sbjct: 654 DRRVLILEGQVGVINPALQSIQYLGNENFAGVDSLRLSTKNKNGINHLDVPVFVEPVNDP 713

Query: 301 PYIRVPSFIILRSNEEETHIFDKEKDKFDFLIGDSDLPTFPVGESHFLVSFSVEVSDGLL 360
           P+I VP +I+L SN  E+ IF  E+DKF+F +GD DL  FP GESHFLV+FS+EV+DG L
Sbjct: 714 PFINVPQYIMLESNGSESLIFHPERDKFNFSVGDPDLVNFPGGESHFLVTFSLEVTDGFL 773

Query: 361 ATNLPAHLINTTELKHMYNCQWQPLQTYVTISKHFMVKATGIRFHGTINDCNSVMQQLFY 420
            TNLP+ LIN+TELK     QWQP+QTY  ISKH  VKA+GIRF GTI  CN +MQQL +
Sbjct: 774 LTNLPSELINSTELKFKNLFQWQPIQTYAAISKHVNVKASGIRFRGTIRQCNDLMQQLLH 833