Miyakogusa Predicted Gene

Lj6g3v1464020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1464020.1 Non Chatacterized Hit- tr|I1MGM4|I1MGM4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,76.36,0,WD40,WD40 repeat; F-BOX AND WD40 DOMAIN PROTEIN,NULL; no
description,Armadillo-like helical; no desc,CUFF.59675.1
         (663 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G06880.2 | Symbols:  | Transducin/WD40 repeat-like superfamil...   760   0.0  
AT3G06880.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...   746   0.0  
AT5G50120.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...    52   1e-06

>AT3G06880.2 | Symbols:  | Transducin/WD40 repeat-like superfamily
            protein | chr3:2170516-2175686 REVERSE LENGTH=1264
          Length = 1264

 Score =  760 bits (1963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/666 (55%), Positives = 484/666 (72%), Gaps = 3/666 (0%)

Query: 1    MIIEELVTSFDYATNNMHLATISSPHVLNGLLEFARNDNLEQFFSLTTILIKCMQFDAQC 60
            MIIE L+T+FD+ATN MHLA ISSP VL GLL+ A++ N  +F SLT+IL+KCMQFD   
Sbjct: 599  MIIEVLITAFDHATNTMHLAAISSPSVLCGLLDVAKSGNSGEFISLTSILVKCMQFDGLH 658

Query: 61   RKYVSQFTPLAPFIHLLQTENTRAKCMALEFFHEILCVPRSSAISLLQRILQEGGINIKQ 120
            RKY+ Q T +APF HLLQ+++    C+AL+F HE+L +PRSSAI +LQ+I +EG  +IK 
Sbjct: 659  RKYIYQHTRVAPFAHLLQSKDQEEICIALQFLHEVLKIPRSSAIKILQQIKKEGSFDIKV 718

Query: 121  ILMHCAHQLQPEHQILAANILLQLDTLNSS-DKSLFREEAVQILVSAMTSVESSE-QTLS 178
             L+HC   LQ +H++ AA+ILLQL+ L+S  +   +R EA + L+ A+T  E S  Q LS
Sbjct: 719  TLLHCIKHLQGDHKLFAADILLQLNALDSPPENKKYRNEATRALLDAVTYSEGSNMQLLS 778

Query: 179  ASILSNLAGTYAWTGEPYTVAWLLRKAGLTSSYHQNMIRNFNWLDQNLQDTSIDLWCSKI 238
              IL+N+ GTY+WTGEPYT AWL+++ GLTS  H NMIRN NW D+ LQDT ID WC KI
Sbjct: 779  TFILANIGGTYSWTGEPYTAAWLMKRGGLTSMSHMNMIRNINWSDECLQDTGIDGWCCKI 838

Query: 239  AKCIISVGDSIFHALEKGLRSKVKRVSRDCLVAVAWLGCQXXXXXXXXXXXXXXXXXXXX 298
            A+ II  G + F  L++GL+SK K VS+ CL+A+AWL  +                    
Sbjct: 839  ARRIIDTGKATFCGLQEGLKSKNKSVSKACLIAIAWLSIEISKGPNSLKYSACEVLLDEV 898

Query: 299  QQFLHPGMDLEERLLACLCMYNYASGKGKQKLMHFSEGVKQSLRRLSNVIWMAEELHRVA 358
             QFLHPG++LEERLLAC+C+YN++SGKG  KL++FSEGV++SLRRLS+V WMA+ELH+  
Sbjct: 899  AQFLHPGLELEERLLACICIYNFSSGKGIHKLVNFSEGVRESLRRLSHVTWMADELHKAT 958

Query: 359  DFLLP-NISRISCVHSQILEVGHNISIAVCSLIYYKGLLFSGYSDGSIKVWDIRGHSASL 417
             +L   +  RISCVH+Q +E+  + S AV +LIY+KGLLFSG+SDGSI+VW++    A+L
Sbjct: 959  YYLFSKSDQRISCVHTQTVEMHQSGSGAVTALIYHKGLLFSGFSDGSIRVWNVNKKIATL 1018

Query: 418  VWDIKEHKKSVTCFSVHEPSDSLLSGSTDKTIKVWKMIQRKLECVEVIALKESVYHLRTH 477
            +WDIKEHK +VTCFS+ E  + +LSGS DKTI+VW++++ KLEC EVI  K+S+  L   
Sbjct: 1019 LWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVWQIVKGKLECAEVIKTKDSIRKLEAF 1078

Query: 478  GETIFAITESQGIKLVNESRVIRDIFKGKRVKCMTVTQGKLYIGCTDSSIQEYSTTYNRE 537
            G  IF IT+   +KL++ SR+ + IFKGK VK M   QGK+YIGC D+SIQE      RE
Sbjct: 1079 GNMIFVITKGHKMKLLDSSRISQSIFKGKGVKSMVSAQGKIYIGCIDTSIQELIVANKRE 1138

Query: 538  LEIKPPTRSWRKQSKPINSIKAYRDCLYSASRHVEGTTFKEWKRTRKPQISMLTDKGDNV 597
             EIK PTRSWR Q+KPINS+  Y+D LYS+S +VE +  K+ +R  +PQ+S+  +KG N+
Sbjct: 1139 KEIKAPTRSWRLQNKPINSVVVYKDMLYSSSTYVEMSNIKDLRRNYEPQMSITAEKGSNI 1198

Query: 598  VTMEVVEDFLYLISSSSANNIQIWLRGVPKKLGRISAGSKITCMLAANDIILCGTEMGLI 657
            V M VVEDF+YL  SSSAN +QIWLR   +K+GR+SAGSKIT +L ANDI+ CGTE G+I
Sbjct: 1199 VAMGVVEDFIYLNRSSSANTLQIWLRRTQQKVGRLSAGSKITSLLTANDIVFCGTEAGVI 1258

Query: 658  KGWIPL 663
            KGWIPL
Sbjct: 1259 KGWIPL 1264


>AT3G06880.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
            protein | chr3:2169899-2175686 REVERSE LENGTH=1261
          Length = 1261

 Score =  746 bits (1925), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/660 (54%), Positives = 478/660 (72%), Gaps = 3/660 (0%)

Query: 1    MIIEELVTSFDYATNNMHLATISSPHVLNGLLEFARNDNLEQFFSLTTILIKCMQFDAQC 60
            MIIE L+T+FD+ATN MHLA ISSP VL GLL+ A++ N  +F SLT+IL+KCMQFD   
Sbjct: 599  MIIEVLITAFDHATNTMHLAAISSPSVLCGLLDVAKSGNSGEFISLTSILVKCMQFDGLH 658

Query: 61   RKYVSQFTPLAPFIHLLQTENTRAKCMALEFFHEILCVPRSSAISLLQRILQEGGINIKQ 120
            RKY+ Q T +APF HLLQ+++    C+AL+F HE+L +PRSSAI +LQ+I +EG  +IK 
Sbjct: 659  RKYIYQHTRVAPFAHLLQSKDQEEICIALQFLHEVLKIPRSSAIKILQQIKKEGSFDIKV 718

Query: 121  ILMHCAHQLQPEHQILAANILLQLDTLNSS-DKSLFREEAVQILVSAMTSVESSE-QTLS 178
             L+HC   LQ +H++ AA+ILLQL+ L+S  +   +R EA + L+ A+T  E S  Q LS
Sbjct: 719  TLLHCIKHLQGDHKLFAADILLQLNALDSPPENKKYRNEATRALLDAVTYSEGSNMQLLS 778

Query: 179  ASILSNLAGTYAWTGEPYTVAWLLRKAGLTSSYHQNMIRNFNWLDQNLQDTSIDLWCSKI 238
              IL+N+ GTY+WTGEPYT AWL+++ GLTS  H NMIRN NW D+ LQDT ID WC KI
Sbjct: 779  TFILANIGGTYSWTGEPYTAAWLMKRGGLTSMSHMNMIRNINWSDECLQDTGIDGWCCKI 838

Query: 239  AKCIISVGDSIFHALEKGLRSKVKRVSRDCLVAVAWLGCQXXXXXXXXXXXXXXXXXXXX 298
            A+ II  G + F  L++GL+SK K VS+ CL+A+AWL  +                    
Sbjct: 839  ARRIIDTGKATFCGLQEGLKSKNKSVSKACLIAIAWLSIEISKGPNSLKYSACEVLLDEV 898

Query: 299  QQFLHPGMDLEERLLACLCMYNYASGKGKQKLMHFSEGVKQSLRRLSNVIWMAEELHRVA 358
             QFLHPG++LEERLLAC+C+YN++SGKG  KL++FSEGV++SLRRLS+V WMA+ELH+  
Sbjct: 899  AQFLHPGLELEERLLACICIYNFSSGKGIHKLVNFSEGVRESLRRLSHVTWMADELHKAT 958

Query: 359  DFLLP-NISRISCVHSQILEVGHNISIAVCSLIYYKGLLFSGYSDGSIKVWDIRGHSASL 417
             +L   +  RISCVH+Q +E+  + S AV +LIY+KGLLFSG+SDGSI+VW++    A+L
Sbjct: 959  YYLFSKSDQRISCVHTQTVEMHQSGSGAVTALIYHKGLLFSGFSDGSIRVWNVNKKIATL 1018

Query: 418  VWDIKEHKKSVTCFSVHEPSDSLLSGSTDKTIKVWKMIQRKLECVEVIALKESVYHLRTH 477
            +WDIKEHK +VTCFS+ E  + +LSGS DKTI+VW++++ KLEC EVI  K+S+  L   
Sbjct: 1019 LWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVWQIVKGKLECAEVIKTKDSIRKLEAF 1078

Query: 478  GETIFAITESQGIKLVNESRVIRDIFKGKRVKCMTVTQGKLYIGCTDSSIQEYSTTYNRE 537
            G  IF IT+   +KL++ SR+ + IFKGK VK M   QGK+YIGC D+SIQE      RE
Sbjct: 1079 GNMIFVITKGHKMKLLDSSRISQSIFKGKGVKSMVSAQGKIYIGCIDTSIQELIVANKRE 1138

Query: 538  LEIKPPTRSWRKQSKPINSIKAYRDCLYSASRHVEGTTFKEWKRTRKPQISMLTDKGDNV 597
             EIK PTRSWR Q+KPINS+  Y+D LYS+S +VE +  K+ +R  +PQ+S+  +KG N+
Sbjct: 1139 KEIKAPTRSWRLQNKPINSVVVYKDMLYSSSTYVEMSNIKDLRRNYEPQMSITAEKGSNI 1198

Query: 598  VTMEVVEDFLYLISSSSANNIQIWLRGVPKKLGRISAGSKITCMLAANDIILCGTEMGLI 657
            V M VVEDF+YL  SSSAN +QIWLR   +K+GR+SAGSKIT +L ANDI+ CGTE GL+
Sbjct: 1199 VAMGVVEDFIYLNRSSSANTLQIWLRRTQQKVGRLSAGSKITSLLTANDIVFCGTEAGLM 1258


>AT5G50120.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr5:20382630-20383796 REVERSE LENGTH=388
          Length = 388

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 4/88 (4%)

Query: 380 HNISIAVCSLIYYKG-LLFSGYSDGSIKVWD-IRGHSASLVWDIKEHKKSVTCFSVHEPS 437
           HN  I   +L    G LL SG SDGSI VW+   G    +V  ++ H +SV C +V   S
Sbjct: 258 HNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCLAV--VS 315

Query: 438 DSLLSGSTDKTIKVWKMIQRKLECVEVI 465
           D L SGS DKT+++WK   +   C+ ++
Sbjct: 316 DILCSGSADKTVRLWKCSAKDYSCLAML 343