Miyakogusa Predicted Gene
- Lj6g3v1463990.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1463990.2 CUFF.59671.2
(396 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 448 e-126
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 3e-85
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 6e-84
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 4e-80
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 2e-77
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 5e-77
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 280 1e-75
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 278 3e-75
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 278 4e-75
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 8e-75
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 276 3e-74
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 5e-74
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 9e-74
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 273 1e-73
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 272 3e-73
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 6e-73
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 2e-72
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 3e-72
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 267 8e-72
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 1e-71
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 264 8e-71
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 263 1e-70
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 3e-70
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 7e-70
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 258 5e-69
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 258 5e-69
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 1e-68
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 256 2e-68
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 3e-68
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 3e-68
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 6e-68
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 1e-67
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 252 3e-67
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 252 3e-67
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 252 3e-67
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 251 4e-67
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 251 5e-67
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 5e-67
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 1e-66
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 2e-66
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 249 2e-66
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 6e-66
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 7e-66
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 8e-66
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 247 8e-66
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 247 1e-65
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 247 1e-65
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 1e-65
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 4e-65
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 245 4e-65
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 5e-65
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 244 7e-65
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 243 1e-64
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 3e-64
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 4e-64
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 7e-64
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 1e-63
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 1e-63
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 2e-63
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 4e-63
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 238 4e-63
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 6e-63
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 7e-63
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 7e-63
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 237 1e-62
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 1e-62
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 2e-62
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 5e-62
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 7e-62
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 234 9e-62
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 3e-61
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 231 4e-61
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 6e-61
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 7e-61
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 7e-61
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 8e-61
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 231 9e-61
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 230 1e-60
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 1e-60
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 230 1e-60
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 2e-60
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 2e-60
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 3e-59
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 4e-59
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 4e-59
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 4e-59
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 5e-59
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 8e-59
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 8e-59
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 9e-59
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 3e-58
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 221 1e-57
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 220 1e-57
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 1e-57
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 219 2e-57
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 219 3e-57
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 219 3e-57
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 1e-56
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 1e-56
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 1e-56
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 5e-56
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 1e-55
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 3e-55
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 5e-55
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 5e-55
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 211 1e-54
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 4e-54
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 208 4e-54
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 6e-54
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 6e-54
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 206 2e-53
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 3e-53
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 205 3e-53
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 4e-53
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 6e-53
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 8e-53
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 3e-52
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 4e-52
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 201 7e-52
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 199 3e-51
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 4e-51
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 7e-51
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 2e-50
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 3e-50
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 195 5e-50
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 8e-50
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 2e-49
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 192 2e-49
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 192 5e-49
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 4e-48
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 6e-48
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 7e-48
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 4e-47
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 185 5e-47
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 185 6e-47
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 184 1e-46
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 1e-45
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 1e-45
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 3e-44
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 1e-43
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 2e-43
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 1e-41
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 164 1e-40
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 4e-37
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 8e-37
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 4e-36
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 6e-34
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 9e-30
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 6e-28
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 8e-22
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 8e-22
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 97 1e-20
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 97 1e-20
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 90 3e-18
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 90 3e-18
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 89 4e-18
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 4e-18
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 89 5e-18
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 9e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 6e-17
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 7e-17
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 1e-15
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 1e-15
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 80 2e-15
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 80 2e-15
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 79 6e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 77 2e-14
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 76 4e-14
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 6e-14
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 6e-14
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 75 8e-14
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 75 8e-14
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 75 9e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 74 2e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 74 2e-13
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 73 4e-13
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 4e-13
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 6e-13
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 1e-12
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 1e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 69 6e-12
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 67 2e-11
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 3e-11
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 8e-11
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 9e-11
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 62 7e-10
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 5e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 6e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 59 8e-09
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 9e-09
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 56 4e-08
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 6e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 8e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 52 8e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 49 6e-06
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 7e-06
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 210/398 (52%), Positives = 289/398 (72%), Gaps = 5/398 (1%)
Query: 2 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVF----SRVMDTFSKNLV 57
+S + HA++ GY TYPSL+ + ++ Y RC++ ++A + S + NL+
Sbjct: 45 NSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLI 104
Query: 58 IESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS-AEVEPD 116
IESLMK GE +A+KV ++V+TWN +IGGYV+NV++ + L+ + MLS +++P+
Sbjct: 105 IESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPN 164
Query: 117 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 176
F+FAS + CARLG L +AKWVH LM++ ++LN ILS+ALVD+YAKCG I S++VF
Sbjct: 165 KFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFY 224
Query: 177 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 236
+V R+ VS+WNAMI G A HGLA +AI VFS ME E+V PDSITF+G+L CSHCGL+ E
Sbjct: 225 SVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEE 284
Query: 237 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 296
G+E+F +M RF IQP+LEHYG MVDLLGRAG ++EA +I++MP+EPDVVIWR+LLS+
Sbjct: 285 GKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSS 344
Query: 297 RIHGKKELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSW 356
R + EL E AI N+S+ +SGD+VLLSN+Y S K W +A++VR +M G+RK +GKSW
Sbjct: 345 RTYKNPELGEIAIQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSW 404
Query: 357 IELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
+E G IH+F A D SH E KAI++VLEGLIQ+ K G
Sbjct: 405 LEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQG 442
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 312 bits (799), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 161/382 (42%), Positives = 240/382 (62%), Gaps = 8/382 (2%)
Query: 20 TYPSLVAALISTYARCHQPHIAHHVFSRV---MDTFSKNLVIESLMKAGECDIARKVFDK 76
TYP L+ A ++T A H V R + +N ++ G+ A KVFDK
Sbjct: 123 TYPFLIKA-VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDK 181
Query: 77 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA 136
MP +D+V WN++I G+ +N + + L L+ M S ++PDGFT S+++ CA++GAL
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241
Query: 137 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 196
K VH M++ + N S L+D+YA+CGR++ +K +FD + + W ++I GLAV+
Sbjct: 242 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301
Query: 197 GLALDAIAVFSRME-VENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLE 255
G +AI +F ME E +LP ITFVGIL ACSHCG+V EG E+F M+ + I+P++E
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 361
Query: 256 HYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRL 315
H+G MVDLL RAG +++A IK+MP++P+VVIWR LL AC +HG +LAEFA I +L
Sbjct: 362 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL 421
Query: 316 E---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQS 372
E SGD+VLLSNMY S + W + +++R M GV+K G S +E+G+ +H+F D+S
Sbjct: 422 EPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKS 481
Query: 373 HAEMKAIHRVLEGLIQRAKFDG 394
H + AI+ L+ + R + +G
Sbjct: 482 HPQSDAIYAKLKEMTGRLRSEG 503
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 130/266 (48%), Gaps = 9/266 (3%)
Query: 60 SLMKAGECDIARKVFDKM--PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM-LSAEVEPD 116
SL A KVF K+ P+ +V WNTLI GY + + L+R M +S VEPD
Sbjct: 62 SLPSPPPMSYAHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPD 120
Query: 117 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 176
T+ ++ + + + +H +++ + +L+ +YA CG + + +VFD
Sbjct: 121 THTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFD 180
Query: 177 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 236
+ + WN++ING A +G +A+A+++ M + + PD T V +L AC+ G +
Sbjct: 181 KMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTL 240
Query: 237 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 296
G+ ++ + + L ++DL R G +EEA + M V+ + V W +L+
Sbjct: 241 GKR-VHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGL 298
Query: 297 RIHGKKELAEFAIANISRLESGDFVL 322
++G + AI +ES + +L
Sbjct: 299 AVNG---FGKEAIELFKYMESTEGLL 321
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 308 bits (788), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 151/347 (43%), Positives = 227/347 (65%), Gaps = 4/347 (1%)
Query: 52 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 111
+ +N ++ G+ A KVFDKMP +D+V WN++I G+ +N + + L L+ M S
Sbjct: 24 YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK 83
Query: 112 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
++PDGFT S+++ CA++GAL K VH M++ + N S L+D+YA+CGR++ +
Sbjct: 84 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 143
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRME-VENVLPDSITFVGILKACSH 230
K +FD + + W ++I GLAV+G +AI +F ME E +LP ITFVGIL ACSH
Sbjct: 144 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 203
Query: 231 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 290
CG+V EG E+F M+ + I+P++EH+G MVDLL RAG +++A IK+MP++P+VVIWR
Sbjct: 204 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWR 263
Query: 291 ALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGG 347
LL AC +HG +LAEFA I +LE SGD+VLLSNMY S + W + +++R M G
Sbjct: 264 TLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDG 323
Query: 348 VRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
V+K G S +E+G+ +H+F D+SH + AI+ L+ + R + +G
Sbjct: 324 VKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEG 370
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 295 bits (755), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 158/402 (39%), Positives = 251/402 (62%), Gaps = 18/402 (4%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNL-----VIESLM 62
+THA++++ G P + +L++ Y+ C A VF D+ SK+L V+ +
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFD---DSGSKDLPAWNSVVNAYA 139
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML-----SAEVEPDG 117
KAG D ARK+FD+MP R+V++W+ LI GYV ++ + L LFR M A V P+
Sbjct: 140 KAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNE 199
Query: 118 FTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDT 177
FT ++V++ C RLGAL KWVH + + V+++ +L AL+DMYAKCG ++ +K+VF+
Sbjct: 200 FTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNA 259
Query: 178 V-ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEV-ENVLPDSITFVGILKACSHCGLVN 235
+ ++ V ++AMI LA++GL + +FS M +N+ P+S+TFVGIL AC H GL+N
Sbjct: 260 LGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLIN 319
Query: 236 EGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
EG+ +F +M F I P ++HYG MVDL GR+G ++EA + I +MP+EPDV+IW +LLS
Sbjct: 320 EGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Query: 296 CRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKR 352
R+ G + E A+ + L+ SG +VLLSN+Y W + +R+ M++ G+ K
Sbjct: 380 SRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVP 439
Query: 353 GKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
G S++E+ +H+F D+S E + I+ +L+ ++QR + G
Sbjct: 440 GCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAG 481
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 286 bits (731), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 227/381 (59%), Gaps = 7/381 (1%)
Query: 6 AAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMK 63
+ HA++ GY V +LI++YA +AH +F R+ D S N VI+ +K
Sbjct: 134 TTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVK 193
Query: 64 AGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 123
AG+ DIA +F KM ++ ++W T+I GYV+ + L+LF M +++VEPD + A+
Sbjct: 194 AGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANA 253
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
++ CA+LGAL KW+H + + R++++ +L L+DMYAKCG ++ + +VF + + V
Sbjct: 254 LSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSV 313
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 243
W A+I+G A HG +AI+ F M+ + P+ ITF +L ACS+ GLV EG+ F
Sbjct: 314 QAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYS 373
Query: 244 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK-- 301
M+ + ++P +EHYG +VDLLGRAG L+EA I+ MP++P+ VIW ALL ACRIH
Sbjct: 374 MERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIE 433
Query: 302 --KELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIEL 359
+E+ E IA I G +V +N++ K W A R +MK GV K G S I L
Sbjct: 434 LGEEIGEILIA-IDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISL 492
Query: 360 GDSIHQFNAADQSHAEMKAIH 380
+ H+F A D+SH E++ I
Sbjct: 493 EGTTHEFLAGDRSHPEIEKIQ 513
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 119/272 (43%), Gaps = 37/272 (13%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
A+ VFD D WN +I G+ + L L++ ML + + +TF S++ C+
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 130 LGALCNAKWVHG----------------LMLEKRVKLNYILSAALVDM------------ 161
L A +H L+ V N+ L+ L D
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 162 ---YAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDS 218
Y K G++D++ +F +A + W MI+G + +A+ +F M+ +V PD+
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 219 ITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMI 277
++ L AC+ G + +G+ H + + R + L ++D+ + G +EEA +
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLG--CVLIDMYAKCGEMEEALEVF 305
Query: 278 KAMPVEPDVVIWRALLS--ACRIHGKKELAEF 307
K + + V W AL+S A HG++ +++F
Sbjct: 306 KNIK-KKSVQAWTALISGYAYHGHGREAISKF 336
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 285 bits (728), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 147/376 (39%), Positives = 227/376 (60%), Gaps = 5/376 (1%)
Query: 24 LVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRD 81
L+ AL++ YA +A F + V + F ++ K G D A+ +FD+ +D
Sbjct: 249 LLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKD 308
Query: 82 VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHG 141
+V W T+I YV++ + LR+F M + ++PD + SV++ CA LG L AKWVH
Sbjct: 309 LVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHS 368
Query: 142 LMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALD 201
+ ++ ++ AL++MYAKCG +D ++ VF+ + R +V W++MIN L++HG A D
Sbjct: 369 CIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASD 428
Query: 202 AIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMV 261
A+++F+RM+ ENV P+ +TFVG+L CSH GLV EG++ F M + + I P+LEHYG MV
Sbjct: 429 ALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMV 488
Query: 262 DLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE---SG 318
DL GRA L EA +I++MPV +VVIW +L+SACRIHG+ EL +FA I LE G
Sbjct: 489 DLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDG 548
Query: 319 DFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKA 378
VL+SN+Y + W + +R +M+ V K++G S I+ H+F D+ H +
Sbjct: 549 ALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNE 608
Query: 379 IHRVLEGLIQRAKFDG 394
I+ L+ ++ + K G
Sbjct: 609 IYAKLDEVVSKLKLAG 624
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 145/315 (46%), Gaps = 38/315 (12%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D F + ++ G + AR VFD+M RDVVTWNT+I Y + + +LF M
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMK 204
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYA------ 163
+ V PD ++V+ C R G + + ++ ++E V+++ L ALV MYA
Sbjct: 205 DSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMD 264
Query: 164 -------------------------KCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGL 198
KCGR+D ++ +FD + + W MI+
Sbjct: 265 MAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDY 324
Query: 199 ALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR-EHFNIMQNRFLIQPQLEHY 257
+A+ VF M + PD ++ ++ AC++ G++++ + H I N ++ +L
Sbjct: 325 PQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG--LESELSIN 382
Query: 258 GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE--LAEFAIANISRL 315
++++ + G L+ ++ + MP +VV W ++++A +HG+ L+ FA +
Sbjct: 383 NALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGEASDALSLFARMKQENV 441
Query: 316 ESGDFVLLSNMY-CS 329
E + + +Y CS
Sbjct: 442 EPNEVTFVGVLYGCS 456
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 10/238 (4%)
Query: 116 DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF 175
D F+F ++ +++ AL +HG+ + + + +DMYA CGRI+ ++ VF
Sbjct: 110 DQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVF 169
Query: 176 DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVN 235
D ++ V WN MI GL +A +F M+ NV+PD + I+ AC G +
Sbjct: 170 DEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMR 229
Query: 236 EGREHFN-IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 294
R + +++N + L +V + AG ++ A + M V ++ + A++S
Sbjct: 230 YNRAIYEFLIENDVRMDTHL--LTALVTMYAGAGCMDMAREFFRKMSVR-NLFVSTAMVS 286
Query: 295 ACRIHGKKELAEFAIANISRLESGDFVLLSNM---YCSLKNWHNAERVRNMMKIGGVR 349
G+ + A+ + E D V + M Y A RV M G++
Sbjct: 287 GYSKCGRLDDAQVI---FDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIK 341
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/402 (37%), Positives = 237/402 (58%), Gaps = 12/402 (2%)
Query: 3 STTAAK-THAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDT--FSKNLVIE 59
ST + K H ++ G P + L+ YA+ A VF R+ + S +I
Sbjct: 141 STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMIT 200
Query: 60 SLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS-AEVEPDGF 118
K G + AR +FD M RD+V+WN +I GY ++ D L LF+ +L+ + +PD
Sbjct: 201 CYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEI 260
Query: 119 TFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV 178
T + ++ C+++GAL +W+H + R++LN + L+DMY+KCG ++ + VF+
Sbjct: 261 TVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDT 320
Query: 179 ARDHVSVWNAMINGLAVHGLALDAIAVFSRME-VENVLPDSITFVGILKACSHCGLVNEG 237
R + WNAMI G A+HG + DA+ +F+ M+ + + P ITF+G L+AC+H GLVNEG
Sbjct: 321 PRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEG 380
Query: 238 REHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACR 297
F M + I+P++EHYG +V LLGRAG L+ A IK M ++ D V+W ++L +C+
Sbjct: 381 IRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCK 440
Query: 298 IHGK----KELAEFAIA-NISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKR 352
+HG KE+AE+ I NI SG +VLLSN+Y S+ ++ +VRN+MK G+ K+
Sbjct: 441 LHGDFVLGKEIAEYLIGLNIK--NSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEP 498
Query: 353 GKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
G S IE+ + +H+F A D+ H++ K I+ +L + +R K G
Sbjct: 499 GISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHG 540
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 280 bits (716), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 213/344 (61%), Gaps = 5/344 (1%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N++I+ M+ G+C AR +FDKM R VV+WNT+I GY N F D + +FR M ++
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIR 271
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
P+ T SV+ +RLG+L +W+H + ++++ +L +AL+DMY+KCG I+ + V
Sbjct: 272 PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHV 331
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
F+ + R++V W+AMING A+HG A DAI F +M V P + ++ +L ACSH GLV
Sbjct: 332 FERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLV 391
Query: 235 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 294
EGR +F+ M + ++P++EHYG MVDLLGR+G L+EA I MP++PD VIW+ALL
Sbjct: 392 EEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLG 451
Query: 295 ACRIHGKKELAEFAIANI----SRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRK 350
ACR+ G E+ + +ANI +SG +V LSNMY S NW +R MK +RK
Sbjct: 452 ACRMQGNVEMGK-RVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRK 510
Query: 351 KRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
G S I++ +H+F D SH + K I+ +L + + + G
Sbjct: 511 DPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAG 554
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 136/284 (47%), Gaps = 50/284 (17%)
Query: 66 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNV--RFLDGLRLFRGMLSAE-VEPDGFTFAS 122
+ D A K+F++MP R+ +WNT+I G+ ++ + L + LF M+S E VEP+ FTF S
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG---------------- 166
V+ CA+ G + K +HGL L+ + + + LV MY CG
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 167 --------------------RID---------VSKQVFDTVARDHVSVWNAMINGLAVHG 197
ID ++ +FD + + V WN MI+G +++G
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 198 LALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHY 257
DA+ VF M+ ++ P+ +T V +L A S G + G E ++ I+
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLG 312
Query: 258 GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
++D+ + G +E+A ++ + +P E +V+ W A+++ IHG+
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRE-NVITWSAMINGFAIHGQ 355
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 92/230 (40%), Gaps = 36/230 (15%)
Query: 47 RVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR 106
R+ D L I+ K G + A VF+++P +V+TW+ +I G+ + + D + F
Sbjct: 306 RIDDVLGSAL-IDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFC 364
Query: 107 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 166
M A V P + +++T C+ HG ++E+ G
Sbjct: 365 KMRQAGVRPSDVAYINLLTACS-----------HGGLVEE-------------------G 394
Query: 167 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 226
R S+ V + + M++ L GL +A M ++ PD + + +L
Sbjct: 395 RRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIK---PDDVIWKALLG 451
Query: 227 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM 276
AC G V G+ NI+ + ++ Y + ++ GN E M
Sbjct: 452 ACRMQGNVEMGKRVANILMD--MVPHDSGAYVALSNMYASQGNWSEVSEM 499
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 278 bits (712), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 150/391 (38%), Positives = 231/391 (59%), Gaps = 6/391 (1%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGEC 67
H ++ +G+ ++ ++ ALI Y +CH+ A +F R+ + + N ++ ++ GE
Sbjct: 360 HGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEV 419
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-VEPDGFTFASVVTG 126
D A + F+ MP +++V+WNT+I G V+ F + + +F M S E V DG T S+ +
Sbjct: 420 DAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASA 479
Query: 127 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 186
C LGAL AKW++ + + ++L+ L LVDM+++CG + + +F+++ VS W
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 539
Query: 187 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 246
A I +A+ G A AI +F M + + PD + FVG L ACSH GLV +G+E F M
Sbjct: 540 TAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK 599
Query: 247 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAE 306
+ P+ HYG MVDLLGRAG LEEA +I+ MP+EP+ VIW +LL+ACR+ G E+A
Sbjct: 600 LHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAA 659
Query: 307 FAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSI 363
+A I L +G +VLLSN+Y S W++ +VR MK G+RK G S I++
Sbjct: 660 YAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKT 719
Query: 364 HQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
H+F + D+SH EM I +L+ + QRA G
Sbjct: 720 HEFTSGDESHPEMPNIEAMLDEVSQRASHLG 750
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 112/201 (55%), Gaps = 2/201 (0%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLF-RGM 108
D F +N ++ + GE D ARKVFD+M R+VV+W ++I GY + D + LF R +
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
EV P+ T V++ CA+L L + V+ + +++N ++ +ALVDMY KC I
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
DV+K++FD ++ + NAM + GL +A+ VF+ M V PD I+ + + +C
Sbjct: 288 DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 229 SHCGLVNEGRE-HFNIMQNRF 248
S + G+ H +++N F
Sbjct: 348 SQLRNILWGKSCHGYVLRNGF 368
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 92/163 (56%), Gaps = 1/163 (0%)
Query: 85 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 144
+N+LI GY + + + LF M+++ + PD +TF ++ CA+ A N +HGL++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 145 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIA 204
+ + + +LV YA+CG +D +++VFD ++ +V W +MI G A A DA+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 205 VFSRM-EVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 246
+F RM E V P+S+T V ++ AC+ + G + + ++N
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 278 bits (711), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 149/387 (38%), Positives = 230/387 (59%), Gaps = 6/387 (1%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGEC 67
H ++ +G+ ++ ++ ALI Y +CH+ A +F R+ + + N ++ ++ GE
Sbjct: 360 HGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEV 419
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-VEPDGFTFASVVTG 126
D A + F+ MP +++V+WNT+I G V+ F + + +F M S E V DG T S+ +
Sbjct: 420 DAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASA 479
Query: 127 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 186
C LGAL AKW++ + + ++L+ L LVDM+++CG + + +F+++ VS W
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 539
Query: 187 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 246
A I +A+ G A AI +F M + + PD + FVG L ACSH GLV +G+E F M
Sbjct: 540 TAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK 599
Query: 247 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAE 306
+ P+ HYG MVDLLGRAG LEEA +I+ MP+EP+ VIW +LL+ACR+ G E+A
Sbjct: 600 LHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAA 659
Query: 307 FAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSI 363
+A I L +G +VLLSN+Y S W++ +VR MK G+RK G S I++
Sbjct: 660 YAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKT 719
Query: 364 HQFNAADQSHAEMKAIHRVLEGLIQRA 390
H+F + D+SH EM I +L+ + QRA
Sbjct: 720 HEFTSGDESHPEMPNIEAMLDEVSQRA 746
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 112/201 (55%), Gaps = 2/201 (0%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLF-RGM 108
D F +N ++ + GE D ARKVFD+M R+VV+W ++I GY + D + LF R +
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
EV P+ T V++ CA+L L + V+ + +++N ++ +ALVDMY KC I
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
DV+K++FD ++ + NAM + GL +A+ VF+ M V PD I+ + + +C
Sbjct: 288 DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 229 SHCGLVNEGRE-HFNIMQNRF 248
S + G+ H +++N F
Sbjct: 348 SQLRNILWGKSCHGYVLRNGF 368
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 92/163 (56%), Gaps = 1/163 (0%)
Query: 85 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 144
+N+LI GY + + + LF M+++ + PD +TF ++ CA+ A N +HGL++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 145 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIA 204
+ + + +LV YA+CG +D +++VFD ++ +V W +MI G A A DA+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 205 VFSRM-EVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 246
+F RM E V P+S+T V ++ AC+ + G + + ++N
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 277 bits (709), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 144/393 (36%), Positives = 233/393 (59%), Gaps = 18/393 (4%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR-VMDTFS-KNLVIESLM----- 62
H L G+ Y + AL+ +YA ++H +R + D S +N+V + M
Sbjct: 149 HTHLFKSGFHLYVVVQTALLHSYASS----VSHITLARQLFDEMSERNVVSWTAMLSGYA 204
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS-AEVEPDGFTFA 121
++G+ A +F+ MP RDV +WN ++ +N FL+ + LFR M++ + P+ T
Sbjct: 205 RSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVV 264
Query: 122 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 181
V++ CA+ G L AK +H + + + +S +LVD+Y KCG ++ + VF ++
Sbjct: 265 CVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKK 324
Query: 182 HVSVWNAMINGLAVHGLALDAIAVFSRM---EVENVLPDSITFVGILKACSHCGLVNEGR 238
++ WN+MIN A+HG + +AIAVF M + ++ PD ITF+G+L AC+H GLV++GR
Sbjct: 325 SLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGR 384
Query: 239 EHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRI 298
+F++M NRF I+P++EHYG ++DLLGRAG +EA ++ M ++ D IW +LL+AC+I
Sbjct: 385 GYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKI 444
Query: 299 HGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKS 355
HG +LAE A+ N+ L G +++N+Y + NW A R R M+K K G S
Sbjct: 445 HGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWS 504
Query: 356 WIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQ 388
IE+ + +HQF + D+SH E + I+ +L+ LI
Sbjct: 505 RIEIDNEVHQFYSLDKSHPETEEIYMILDSLIS 537
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 234/395 (59%), Gaps = 23/395 (5%)
Query: 20 TYPSLV--AALISTYARCHQPH--IAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFD 75
T+P ++ A I ++ Q H I H F D + N +I G D+ARKVFD
Sbjct: 153 TFPFVLKACAYIFGFSEGKQVHCQIVKHGFGG--DVYVNNGLIHLYGSCGCLDLARKVFD 210
Query: 76 KMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCN 135
+MP R +V+WN++I V+ + L+LFR M + EPDG+T SV++ CA LG+L
Sbjct: 211 EMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSL 269
Query: 136 AKWVHGLMLEK---RVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMING 192
W H +L K V ++ ++ +L++MY KCG + +++QVF + + ++ WNAMI G
Sbjct: 270 GTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILG 329
Query: 193 LAVHGLALDAIAVFSRM--EVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLI 250
A HG A +A+ F RM + ENV P+S+TFVG+L AC+H G VN+GR++F++M + I
Sbjct: 330 FATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCI 389
Query: 251 QPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK-ELAEFAI 309
+P LEHYG +VDL+ RAG + EA +M+ +MP++PD VIWR+LL AC G EL+E
Sbjct: 390 EPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIA 449
Query: 310 ANISRLE----------SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIEL 359
NI + SG +VLLS +Y S W++ VR +M G+RK+ G S IE+
Sbjct: 450 RNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEI 509
Query: 360 GDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
H+F A D SH + K I++ L+ + R + G
Sbjct: 510 NGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIG 544
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 115/245 (46%), Gaps = 6/245 (2%)
Query: 65 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNV-RFLDGLRLFRGMLS-AEVEPDGFTFAS 122
+ + A +VFD + WNTLI +V R + L+R ML E PD TF
Sbjct: 97 SDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPF 156
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 182
V+ CA + K VH +++ + ++ L+ +Y CG +D++++VFD +
Sbjct: 157 VLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERS 216
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
+ WN+MI+ L G A+ +F M+ + PD T +L AC+ G ++ G
Sbjct: 217 LVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHA 275
Query: 243 IMQNRFLIQPQLEHY--GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
+ + + ++ +++++ + G+L A + + M + D+ W A++ HG
Sbjct: 276 FLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHG 334
Query: 301 KKELA 305
+ E A
Sbjct: 335 RAEEA 339
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 275 bits (702), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 223/395 (56%), Gaps = 5/395 (1%)
Query: 5 TAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLM 62
T + H I G+ P + LIS YA H VF+ + D + ++ +
Sbjct: 126 TGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACA 185
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
+ G+ ARK+F+ MP RD + WN +I GY + + L +F M V+ +G S
Sbjct: 186 RCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMIS 245
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 182
V++ C +LGAL +W H + ++K+ L+ LVD+YAKCG ++ + +VF + +
Sbjct: 246 VLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKN 305
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
V W++ +NGLA++G + +FS M+ + V P+++TFV +L+ CS G V+EG+ HF+
Sbjct: 306 VYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFD 365
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 302
M+N F I+PQLEHYG +VDL RAG LE+A ++I+ MP++P +W +LL A R++
Sbjct: 366 SMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNL 425
Query: 303 ELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIEL 359
EL A + LE+ G +VLLSN+Y +W N VR MK GVRK+ G S +E+
Sbjct: 426 ELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEV 485
Query: 360 GDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
+H+F D+SH + I V + + +R + G
Sbjct: 486 NGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAG 520
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 274 bits (700), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 225/369 (60%), Gaps = 7/369 (1%)
Query: 27 ALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGECDIARKVFDKMPV--RDV 82
++ YARC + A +F ++ + T S + ++ KAG+ ++AR +FDKMP+ ++V
Sbjct: 221 TMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNV 280
Query: 83 VTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGL 142
VTW +I GY + + RL M+++ ++ D S++ C G L +H +
Sbjct: 281 VTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSI 340
Query: 143 MLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDA 202
+ + N + AL+DMYAKCG + + VF+ + + + WN M++GL VHG +A
Sbjct: 341 LKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEA 400
Query: 203 IAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVD 262
I +FSRM E + PD +TF+ +L +C+H GL++EG ++F M+ + + PQ+EHYG +VD
Sbjct: 401 IELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVD 460
Query: 263 LLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRL---ESGD 319
LLGR G L+EA +++ MP+EP+VVIW ALL ACR+H + ++A+ + N+ +L + G+
Sbjct: 461 LLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGN 520
Query: 320 FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAI 379
+ LLSN+Y + ++W +R+ MK GV K G S +EL D IH+F D+SH + I
Sbjct: 521 YSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQI 580
Query: 380 HRVLEGLIQ 388
+++L LI+
Sbjct: 581 YQMLGSLIE 589
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 118/243 (48%), Gaps = 14/243 (5%)
Query: 57 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 116
+I +L + ++A +VF+++ +V N+LI + +N + +F M + D
Sbjct: 57 LISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFAD 116
Query: 117 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV--SKQV 174
FT+ ++ C+ L K +H + + + + + AL+D Y++CG + V + ++
Sbjct: 117 NFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKL 176
Query: 175 FDTVA-RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 233
F+ ++ RD VS WN+M+ GL G DA +F M D I++ +L + C
Sbjct: 177 FEKMSERDTVS-WNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCRE 231
Query: 234 VNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE-PDVVIWRAL 292
+++ E F M R + + TMV +AG++E A M MP+ +VV W +
Sbjct: 232 MSKAFELFEKMPERNTVS-----WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTII 286
Query: 293 LSA 295
++
Sbjct: 287 IAG 289
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 273 bits (698), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/372 (40%), Positives = 215/372 (57%), Gaps = 6/372 (1%)
Query: 20 TYPSLVAALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKM 77
T P LV AL+ +++C H A +F + S +I + G D++RK+FD M
Sbjct: 291 TIP-LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDM 349
Query: 78 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 137
+DVV WN +IGG V+ R D L LF+ M ++ +PD T ++ C++LGAL
Sbjct: 350 EEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI 409
Query: 138 WVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHG 197
W+H + + + LN L +LVDMYAKCG I + VF + + + A+I GLA+HG
Sbjct: 410 WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHG 469
Query: 198 LALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHY 257
A AI+ F+ M + PD ITF+G+L AC H G++ GR++F+ M++RF + PQL+HY
Sbjct: 470 DASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHY 529
Query: 258 GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRL-- 315
MVDLLGRAG LEEA ++++MP+E D +W ALL CR+HG EL E A + L
Sbjct: 530 SIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDP 589
Query: 316 -ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHA 374
+SG +VLL MY W +A+R R MM GV K G S IE+ + +F D+S
Sbjct: 590 SDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRP 649
Query: 375 EMKAIHRVLEGL 386
E + I+ L L
Sbjct: 650 ESEKIYDRLHCL 661
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 145/323 (44%), Gaps = 43/323 (13%)
Query: 20 TYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSK--NLVIESLMKAGECDIARKVFDKM 77
TYP L I HV ++ S N I G+ + ARKVFD+
Sbjct: 158 TYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDES 217
Query: 78 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 137
PVRD+V+WN LI GY K + +++ M S V+PD T +V+ C+ LG L K
Sbjct: 218 PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGK 277
Query: 138 WVHGLMLEKRVKLNYILSAALVDM-------------------------------YAKCG 166
+ + E +++ L AL+DM YA+CG
Sbjct: 278 EFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCG 337
Query: 167 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 226
+DVS+++FD + V +WNAMI G DA+A+F M+ N PD IT + L
Sbjct: 338 LLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLS 397
Query: 227 ACSHCGLVNEGREHFNIMQNRFLIQPQLE---HYGT-MVDLLGRAGNLEEACNMIKAMPV 282
ACS G ++ G I +R++ + L GT +VD+ + GN+ EA ++ +
Sbjct: 398 ACSQLGALDVG-----IWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT 452
Query: 283 EPDVVIWRALLSACRIHGKKELA 305
+ + + A++ +HG A
Sbjct: 453 R-NSLTYTAIIGGLALHGDASTA 474
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 160/339 (47%), Gaps = 32/339 (9%)
Query: 48 VMDTFSKNLVIE--SLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLF 105
++D F+ + +I +L ++ D + K+ + ++ +WN I G+ ++ + L+
Sbjct: 82 ILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLY 141
Query: 106 RGMLS---AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMY 162
+ ML E PD FT+ + CA L + G +L+ R++L + A + M+
Sbjct: 142 KQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMF 201
Query: 163 AKCGRIDVSKQVFD-TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
A CG ++ +++VFD + RD VS WN +ING G A AI V+ ME E V PD +T
Sbjct: 202 ASCGDMENARKVFDESPVRDLVS-WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTM 260
Query: 222 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP 281
+G++ +CS G +N G+E + ++ L + + ++D+ + G++ EA + +
Sbjct: 261 IGLVSSCSMLGDLNRGKEFYEYVKENGL-RMTIPLVNALMDMFSKCGDIHEARRIFDNLE 319
Query: 282 VEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRN 341
+ +V W ++S + + L + + +E D VL W N
Sbjct: 320 -KRTIVSWTTMISG---YARCGLLDVSRKLFDDMEEKDVVL----------W-------N 358
Query: 342 MMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIH 380
M G V+ KRG+ + L + ++ E+ IH
Sbjct: 359 AMIGGSVQAKRGQDALAL---FQEMQTSNTKPDEITMIH 394
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 272 bits (695), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 147/384 (38%), Positives = 225/384 (58%), Gaps = 5/384 (1%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAG 65
+ H +I G + ++ Y C A +F ++ D + N +I K G
Sbjct: 147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCG 206
Query: 66 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 125
D A+ +FD+MP R+ V+WN++I G+V+N RF D L +FR M +V+PDGFT S++
Sbjct: 207 LIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLN 266
Query: 126 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 185
CA LGA +W+H ++ R +LN I+ AL+DMY KCG I+ VF+ + +S
Sbjct: 267 ACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSC 326
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 245
WN+MI GLA +G A+ +FS +E + PDS++F+G+L AC+H G V+ E F +M+
Sbjct: 327 WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
Query: 246 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
+++I+P ++HY MV++LG AG LEEA +IK MPVE D VIW +LLSACR G E+A
Sbjct: 387 EKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
Query: 306 EFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDS 362
+ A + +L E+ +VLLSN Y S + A R +MK + K+ G S IE+
Sbjct: 447 KRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFE 506
Query: 363 IHQFNAADQSHAEMKAIHRVLEGL 386
+H+F + +H + I+ +L+ L
Sbjct: 507 VHEFISCGGTHPKSAEIYSLLDIL 530
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 146/330 (44%), Gaps = 38/330 (11%)
Query: 20 TYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIE-SLMKAGECDIARKVFDKMP 78
TY L+ ST Q H + + DT + + V+ + + A VF ++
Sbjct: 26 TYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRIN 85
Query: 79 VRDVVTWNTLIGGYVKNVRFLDGLRLFRGML--SAEVEPDGFTFASVVTGCARLGALCNA 136
++ WNT+I G+ ++ + +F ML S V+P T+ SV RLG +
Sbjct: 86 HKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDG 145
Query: 137 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 196
+ +HG+++++ ++ + + ++ MY CG + + ++F + V WN+MI G A
Sbjct: 146 RQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKC 205
Query: 197 GLA-------------------------------LDAIAVFSRMEVENVLPDSITFVGIL 225
GL DA+ +F M+ ++V PD T V +L
Sbjct: 206 GLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLL 265
Query: 226 KACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEP 284
AC++ G +GR H I++NRF + + ++D+ + G +EE N+ + P +
Sbjct: 266 NACAYLGASEQGRWIHEYIVRNRFELNSIV--VTALIDMYCKCGCIEEGLNVFECAP-KK 322
Query: 285 DVVIWRALLSACRIHGKKELAEFAIANISR 314
+ W +++ +G +E A + + R
Sbjct: 323 QLSCWNSMILGLANNGFEERAMDLFSELER 352
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 271 bits (693), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 145/389 (37%), Positives = 228/389 (58%), Gaps = 11/389 (2%)
Query: 15 VHGYA----TYPSL--VAALISTYARCHQPHIAHHVFS--RVMDTFSKNLVIESLMKAGE 66
VH Y T PSL AL++ YA C + IA +F + D S +++ ++ G
Sbjct: 258 VHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGN 317
Query: 67 CDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTG 126
+AR FD+MPVRD ++W +I GY++ F + L +FR M SA + PD FT SV+T
Sbjct: 318 LKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTA 377
Query: 127 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 186
CA LG+L +W+ + + ++K + ++ AL+DMY KCG + +++VF + + W
Sbjct: 378 CAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTW 437
Query: 187 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 246
AM+ GLA +G +AI VF +M+ ++ PD IT++G+L AC+H G+V++ R+ F M++
Sbjct: 438 TAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRS 497
Query: 247 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAE 306
I+P L HYG MVD+LGRAG ++EA +++ MP+ P+ ++W ALL A R+H + +AE
Sbjct: 498 DHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAE 557
Query: 307 FAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSI 363
A I LE + + LL N+Y K W + VR + ++K G S IE+
Sbjct: 558 LAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFA 617
Query: 364 HQFNAADQSHAEMKAIHRVLEGLIQRAKF 392
H+F A D+SH + + I+ LE L Q + F
Sbjct: 618 HEFVAGDKSHLQSEEIYMKLEELAQESTF 646
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 142/304 (46%), Gaps = 14/304 (4%)
Query: 9 THAKLIVHGYATYPSLVAALIST--YARCHQPHIAHHVFSRVMDTFSKNLVIESLMK-AG 65
T + I + Y+ + S++ +T + + H I V TF K L + + G
Sbjct: 25 TITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPN--PTFQKKLFVFWCSRLGG 82
Query: 66 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 125
A K+F K+P DVV WN +I G+ K +G+RL+ ML V PD TF ++
Sbjct: 83 HVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLN 142
Query: 126 GCARLG-ALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS 184
G R G AL K +H +++ + N + ALV MY+ CG +D+++ VFD ++ V
Sbjct: 143 GLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVF 202
Query: 185 VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC---GLVNEGREHF 241
WN MI+G ++I + ME V P S+T + +L ACS L E+
Sbjct: 203 SWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYV 262
Query: 242 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
+ + +P L +V+ G ++ A + ++M DV+ W +++ G
Sbjct: 263 SECKT----EPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVERGN 317
Query: 302 KELA 305
+LA
Sbjct: 318 LKLA 321
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
+ + +N +++ G D+AR VFD+ DV +WN +I GY + + + + L M
Sbjct: 169 NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME 228
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
V P T V++ C+++ K VH + E + + + L ALV+ YA CG +D
Sbjct: 229 RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMD 288
Query: 170 VSKQVFDTV-ARDHVS------------------------------VWNAMINGLAVHGL 198
++ ++F ++ ARD +S W MI+G G
Sbjct: 289 IAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGC 348
Query: 199 ALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG 258
+++ +F M+ ++PD T V +L AC+H G + G E ++ I+ +
Sbjct: 349 FNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG-EWIKTYIDKNKIKNDVVVGN 407
Query: 259 TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
++D+ + G E+A + M + D W A++ +G+ + A
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDMD-QRDKFTWTAMVVGLANNGQGQEA 453
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 269 bits (688), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/383 (38%), Positives = 229/383 (59%), Gaps = 9/383 (2%)
Query: 18 YATYPSLVAALISTYARCHQPHIAHHVFS--RVMDTFSKNLVIESLMKAGECDIARKVFD 75
Y++ L AL+ Y +C + +A F + D S N ++ ++ G+ + A+ VFD
Sbjct: 265 YSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFD 324
Query: 76 KMPVRDVVTWNTLIGGYVKNVRFLDGLR-LFRGMLSAE-VEPDGFTFASVVTGCARLGAL 133
+MP RD+V+WN+L+ GY K +R LF M E V+PD T S+++G A G L
Sbjct: 325 QMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGEL 384
Query: 134 CNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGL 193
+ +WVHGL++ ++K + LS+AL+DMY KCG I+ + VF T V++W +MI GL
Sbjct: 385 SHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGL 444
Query: 194 AVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQ 253
A HG A+ +F RM+ E V P+++T + +L ACSH GLV EG FN M+++F P+
Sbjct: 445 AFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPE 504
Query: 254 LEHYGTMVDLLGRAGNLEEACNMI-KAMPVEPDVVIWRALLSACRIHGKKELAEFAIANI 312
EHYG++VDLL RAG +EEA +++ K MP+ P +W ++LSACR E AE A+ +
Sbjct: 505 TEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTEL 564
Query: 313 SRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAA 369
+LE G +VLLSN+Y ++ W +++ R M+ GV+K G S + + +H+F AA
Sbjct: 565 LKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAA 624
Query: 370 D-QSHAEMKAIHRVLEGLIQRAK 391
+ Q+H I R+L+ L K
Sbjct: 625 EKQNHPRWTEIKRILQHLYNEMK 647
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 134/287 (46%), Gaps = 39/287 (13%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N +++ M+ G +A KVF +MP DV ++N +I GY K L+ L+L+ M+S +E
Sbjct: 170 NSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIE 229
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKL---NYILSAALVDMYAKCGRIDVS 171
PD +T S++ C L + K VHG +E+R + N ILS AL+DMY KC ++
Sbjct: 230 PDEYTVLSLLVCCGHLSDIRLGKGVHG-WIERRGPVYSSNLILSNALLDMYFKCKESGLA 288
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRME--------------------- 210
K+ FD + + + WN M+ G G A AVF +M
Sbjct: 289 KRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQ 348
Query: 211 ------------VENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG 258
VE V PD +T V ++ ++ G ++ GR ++ R ++
Sbjct: 349 RTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVI-RLQLKGDAFLSS 407
Query: 259 TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
++D+ + G +E A M+ E DV +W ++++ HG + A
Sbjct: 408 ALIDMYCKCGIIERAF-MVFKTATEKDVALWTSMITGLAFHGNGQQA 453
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 122/285 (42%), Gaps = 42/285 (14%)
Query: 45 FSRVMDTF--SKNLVIESLMKAGECDIARKVF-DKMPVRDVVTWNTLIGGYVKNVRFLDG 101
F+ + DTF S+ + ++ D+A+ +F + P +V +NT+I + G
Sbjct: 60 FNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKNECFG 119
Query: 102 LRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVH-GLMLEKRVKLNYILSAALVD 160
L + M+ V PD TF ++ + L + K +H +++ + L L +LV
Sbjct: 120 L--YSSMIRHRVSPDRQTFLYLMKASSFLSEV---KQIHCHIIVSGCLSLGNYLWNSLVK 174
Query: 161 MYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSIT 220
Y + G V+++VF + VS +N MI G A G +L+A+ ++ +M + + PD T
Sbjct: 175 FYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYT 234
Query: 221 FVGILKACSHCGLVNEGREHFNIMQNRFLI------------------------------ 250
+ +L C H + G+ ++ R +
Sbjct: 235 VLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDA 294
Query: 251 --QPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
+ + + TMV R G++E A + MP + D+V W +LL
Sbjct: 295 MKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP-KRDLVSWNSLL 338
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 269 bits (687), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 211/349 (60%), Gaps = 5/349 (1%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D + + +++ K+ + + +VF ++ RD ++WN+L+ GYV+N R+ + LRLFR M+
Sbjct: 276 DVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMV 335
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
+A+V+P F+SV+ CA L L K +HG +L N +++ALVDMY+KCG I
Sbjct: 336 TAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIK 395
Query: 170 VSKQVFDTV-ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
++++FD + D VS W A+I G A+HG +A+++F M+ + V P+ + FV +L AC
Sbjct: 396 AARKIFDRMNVLDEVS-WTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTAC 454
Query: 229 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 288
SH GLV+E +FN M + + +LEHY + DLLGRAG LEEA N I M VEP +
Sbjct: 455 SHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV 514
Query: 289 WRALLSACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKI 345
W LLS+C +H ELAE I ++S G +VL+ NMY S W ++R M+
Sbjct: 515 WSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRK 574
Query: 346 GGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
G+RKK SWIE+ + H F + D+SH M I+ L+ ++++ + +G
Sbjct: 575 KGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEG 623
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 153/280 (54%), Gaps = 6/280 (2%)
Query: 23 SLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDV 82
++ A L+ ++ ++ + R ++ +++ E+ + D R+VF+ MP +DV
Sbjct: 148 NMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDV 207
Query: 83 VTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGL 142
V++NT+I GY ++ + D LR+ R M + +++PD FT +SV+ + + K +HG
Sbjct: 208 VSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGY 267
Query: 143 MLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-ARDHVSVWNAMINGLAVHGLALD 201
++ K + + + ++LVDMYAK RI+ S++VF + RD +S WN+++ G +G +
Sbjct: 268 VIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS-WNSLVAGYVQNGRYNE 326
Query: 202 AIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTM 260
A+ +F +M V P ++ F ++ AC+H ++ G++ H +++ F + +
Sbjct: 327 ALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF--GSNIFIASAL 384
Query: 261 VDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
VD+ + GN++ A + M V D V W A++ +HG
Sbjct: 385 VDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHG 423
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 267 bits (683), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 148/407 (36%), Positives = 234/407 (57%), Gaps = 14/407 (3%)
Query: 2 DSTTAAKTHAKLIVHGYATYPSL-------VAALISTYARCHQPHIAHHVFSRVMD--TF 52
D T+ ++ L+ HGYA L A+I Y++ + A VF + D +
Sbjct: 83 DFTSGSEALGDLL-HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSV 141
Query: 53 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 112
+ N +I+ M++G+ D A K+FDKMP RD+++W +I G+VK + L FR M +
Sbjct: 142 TWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISG 201
Query: 113 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 172
V+PD + + C LGAL WVH +L + K N +S +L+D+Y +CG ++ ++
Sbjct: 202 VKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFAR 261
Query: 173 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 232
QVF + + V WN++I G A +G A +++ F +M+ + PD++TF G L ACSH G
Sbjct: 262 QVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVG 321
Query: 233 LVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 292
LV EG +F IM+ + I P++EHYG +VDL RAG LE+A ++++MP++P+ V+ +L
Sbjct: 322 LVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSL 381
Query: 293 LSACRIHGKK-ELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGV 348
L+AC HG LAE + +++ L ++V+LSNMY + W A ++R MK G+
Sbjct: 382 LAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGL 441
Query: 349 RKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDGC 395
+K+ G S IE+ D +H F A D +H E I VLE + + GC
Sbjct: 442 KKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGC 488
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 107/250 (42%), Gaps = 44/250 (17%)
Query: 82 VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARL--GALCNAKWV 139
V+W + I +N R + + F M A VEP+ TF ++++GC G+ +
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 140 HGL-------------------MLEKRVKL-------------NYILSAALVDMYAKCGR 167
HG M KR + N + ++D Y + G+
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 168 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
+D + ++FD + + W AMING G +A+ F M++ V PD + + L A
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 228 CSHCGLVNEGREHFNIMQNRFLIQPQLEH----YGTMVDLLGRAGNLEEACNMIKAMPVE 283
C++ G ++ F + +R+++ ++ +++DL R G +E A + M +
Sbjct: 216 CTNLGALS-----FGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME-K 269
Query: 284 PDVVIWRALL 293
VV W +++
Sbjct: 270 RTVVSWNSVI 279
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 229/384 (59%), Gaps = 7/384 (1%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAG 65
+ H +++V G+ + +V LI Y C A +F ++ D N ++ K G
Sbjct: 137 QIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVG 196
Query: 66 ECDIARKVFDKMP--VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 123
E D AR + + MP VR+ V+W +I GY K+ R + + +F+ ML VEPD T +V
Sbjct: 197 EMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAV 256
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
++ CA LG+L + + + + + L+ A++DMYAK G I + VF+ V +V
Sbjct: 257 LSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNV 316
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 243
W +I GLA HG +A+A+F+RM V P+ +TF+ IL ACSH G V+ G+ FN
Sbjct: 317 VTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNS 376
Query: 244 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 303
M++++ I P +EHYG M+DLLGRAG L EA +IK+MP + + IW +LL+A +H E
Sbjct: 377 MRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLE 436
Query: 304 LAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELG 360
L E A++ + +LE SG+++LL+N+Y +L W + +RNMMK GV+K G+S IE+
Sbjct: 437 LGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVE 496
Query: 361 DSIHQFNAADQSHAEMKAIHRVLE 384
+ +++F + D +H +++ IH +L+
Sbjct: 497 NRVYKFISGDLTHPQVERIHEILQ 520
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 48/292 (16%)
Query: 58 IESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLD-------GLRLFRGMLS 110
IE+ AG A VF P + NT+I + + LD + ++R + +
Sbjct: 54 IEACSNAGHLRYAYSVFTHQPCPNTYLHNTMI----RALSLLDEPNAHSIAITVYRKLWA 109
Query: 111 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 170
+PD FTF V+ R+ + + +HG ++ + + L+ MY CG +
Sbjct: 110 LCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGD 169
Query: 171 SKQVFDTVARDHVSVWNAM---------------------------------INGLAVHG 197
++++FD + V+VWNA+ I+G A G
Sbjct: 170 ARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSG 229
Query: 198 LALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHY 257
A +AI VF RM +ENV PD +T + +L AC+ G + G + + +R + +
Sbjct: 230 RASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGM-NRAVSLN 288
Query: 258 GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS--ACRIHGKKELAEF 307
++D+ ++GN+ +A ++ + + E +VV W +++ A HG + LA F
Sbjct: 289 NAVIDMYAKSGNITKALDVFECVN-ERNVVTWTTIIAGLATHGHGAEALAMF 339
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 141/360 (39%), Positives = 208/360 (57%), Gaps = 6/360 (1%)
Query: 27 ALISTYARCHQPHIAHHVF--SRVMDTFSKNLVIESLMKAGECDIARKVFDKMPV-RDVV 83
A+IS Y C A H F + V + +I MKA + ++A +F M V +++V
Sbjct: 191 AMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLV 250
Query: 84 TWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLM 143
TWN +I GYV+N R DGL+LFR ML + P+ +S + GC+ L AL + +H ++
Sbjct: 251 TWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV 310
Query: 144 LEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAI 203
+ + + +L+ MY KCG + + ++F+ + + V WNAMI+G A HG A A+
Sbjct: 311 SKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKAL 370
Query: 204 AVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDL 263
+F M + PD ITFV +L AC+H GLVN G +F M + ++PQ +HY MVDL
Sbjct: 371 CLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDL 430
Query: 264 LGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGD---F 320
LGRAG LEEA +I++MP P ++ LL ACR+H ELAEFA + +L S + +
Sbjct: 431 LGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGY 490
Query: 321 VLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIH 380
V L+N+Y S W + RVR MK V K G SWIE+ + +H F ++D+ H E+ +IH
Sbjct: 491 VQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 133/289 (46%), Gaps = 16/289 (5%)
Query: 20 TYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGECDIARKVFDKM 77
T+ SL+ + +R + AH +F + DTFS N+++ ++ + A+ FD+M
Sbjct: 94 TWNSLLIGISKDPSRMME---AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM 150
Query: 78 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 137
P +D +WNT+I GY + LF M+ E + ++ ++++G G L A
Sbjct: 151 PFKDAASWNTMITGYARRGEMEKARELFYSMM----EKNEVSWNAMISGYIECGDLEKAS 206
Query: 138 WVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF-DTVARDHVSVWNAMINGLAVH 196
+ + V + A++ Y K ++++++ +F D ++ WNAMI+G +
Sbjct: 207 HFFKVAPVRGV----VAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVEN 262
Query: 197 GLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEH 256
D + +F M E + P+S L CS + GR+ I+ L +
Sbjct: 263 SRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCN-DVTA 321
Query: 257 YGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
+++ + + G L +A + + M + DVV W A++S HG + A
Sbjct: 322 LTSLISMYCKCGELGDAWKLFEVMK-KKDVVAWNAMISGYAQHGNADKA 369
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 264 bits (675), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 131/378 (34%), Positives = 225/378 (59%), Gaps = 6/378 (1%)
Query: 23 SLVAALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPVR 80
+L A++ Y +C A +F + D + +++ + + + AR+V + MP +
Sbjct: 268 TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK 327
Query: 81 DVVTWNTLIGGYVKNVRFLDGLRLFRGM-LSAEVEPDGFTFASVVTGCARLGALCNAKWV 139
D+V WN LI Y +N + + L +F + L ++ + T S ++ CA++GAL +W+
Sbjct: 328 DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWI 387
Query: 140 HGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLA 199
H + + +++N+ +++AL+ MY+KCG ++ S++VF++V + V VW+AMI GLA+HG
Sbjct: 388 HSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCG 447
Query: 200 LDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGT 259
+A+ +F +M+ NV P+ +TF + ACSH GLV+E F+ M++ + I P+ +HY
Sbjct: 448 NEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC 507
Query: 260 MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLES-- 317
+VD+LGR+G LE+A I+AMP+ P +W ALL AC+IH LAE A + LE
Sbjct: 508 IVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRN 567
Query: 318 -GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEM 376
G VLLSN+Y L W N +R M++ G++K+ G S IE+ IH+F + D +H
Sbjct: 568 DGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMS 627
Query: 377 KAIHRVLEGLIQRAKFDG 394
+ ++ L ++++ K +G
Sbjct: 628 EKVYGKLHEVMEKLKSNG 645
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 129/255 (50%), Gaps = 5/255 (1%)
Query: 53 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS-A 111
SK + +L + ARKVFD++P + WNTLI Y + + F M+S +
Sbjct: 66 SKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSES 125
Query: 112 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
+ P+ +TF ++ A + +L + +HG+ ++ V + ++ +L+ Y CG +D +
Sbjct: 126 QCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSA 185
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 231
+VF T+ V WN+MING G A+ +F +ME E+V +T VG+L AC+
Sbjct: 186 CKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI 245
Query: 232 GLVNEGREHFN-IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 290
+ GR+ + I +NR + L + M+D+ + G++E+A + AM E D V W
Sbjct: 246 RNLEFGRQVCSYIEENRVNVNLTLAN--AMLDMYTKCGSIEDAKRLFDAME-EKDNVTWT 302
Query: 291 ALLSACRIHGKKELA 305
+L I E A
Sbjct: 303 TMLDGYAISEDYEAA 317
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 139/283 (49%), Gaps = 34/283 (12%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D F N +I G+ D A KVF + +DVV+WN++I G+V+ L LF+ M
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
S +V+ T V++ CA++ L + V + E RV +N L+ A++DMY KCG I+
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 170 VSKQVFDTV-ARDHVS------------------------------VWNAMINGLAVHGL 198
+K++FD + +D+V+ WNA+I+ +G
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
Query: 199 ALDAIAVFSRMEVE-NVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHY 257
+A+ VF ++++ N+ + IT V L AC+ G + GR + ++ + I+
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK-KHGIRMNFHVT 403
Query: 258 GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
++ + + G+LE++ + ++ + DV +W A++ +HG
Sbjct: 404 SALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG 445
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 263 bits (672), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 135/343 (39%), Positives = 199/343 (58%), Gaps = 3/343 (0%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N +I K E D A +F K+ R +V+WN +I G+ +N R +D L F M S V+
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK 435
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
PD FT+ SV+T A L +AKW+HG+++ + N ++ ALVDMYAKCG I +++ +
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
FD ++ HV+ WNAMI+G HG A+ +F M+ + P+ +TF+ ++ ACSH GLV
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555
Query: 235 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 294
G + F +M+ + I+ ++HYG MVDLLGRAG L EA + I MPV+P V ++ A+L
Sbjct: 556 EAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
Query: 295 ACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKK 351
AC+IH AE A + L D VLL+N+Y + W +VR M G+RK
Sbjct: 616 ACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKT 675
Query: 352 RGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
G S +E+ + +H F + +H + K I+ LE LI K G
Sbjct: 676 PGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAG 718
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 123/244 (50%), Gaps = 2/244 (0%)
Query: 57 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 116
+++ K G + AR++FD M R+VV+WN++I YV+N + + +F+ ML V+P
Sbjct: 277 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 336
Query: 117 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 176
+ + CA LG L +++H L +E + N + +L+ MY KC +D + +F
Sbjct: 337 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 396
Query: 177 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 236
+ + WNAMI G A +G +DA+ FS+M V PD+ T+V ++ A + + +
Sbjct: 397 KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHH 456
Query: 237 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 296
+ ++ R + + +VD+ + G + A +I M E V W A++
Sbjct: 457 AKWIHGVVM-RSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGY 514
Query: 297 RIHG 300
HG
Sbjct: 515 GTHG 518
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 102/190 (53%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
+D F+ + K + + ARKVFD+MP RD+V+WNT++ GY +N L + + M
Sbjct: 168 LDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM 227
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
++P T SV+ + L + K +HG + +S ALVDMYAKCG +
Sbjct: 228 CEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSL 287
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
+ ++Q+FD + +V WN+MI+ + +A+ +F +M E V P ++ +G L AC
Sbjct: 288 ETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHAC 347
Query: 229 SHCGLVNEGR 238
+ G + GR
Sbjct: 348 ADLGDLERGR 357
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 126/246 (51%), Gaps = 6/246 (2%)
Query: 52 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 111
F + ++ + G D A +VF+ + + V ++T++ G+ K L+ F M
Sbjct: 70 FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD 129
Query: 112 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
+VEP + F ++ C L K +HGL+++ L+ L +MYAKC +++ +
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 231
++VFD + + WN ++ G + +G+A A+ + M EN+ P IT V +L A S
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 232 GLVNEGRE-HFNIMQNRFLIQPQLEHYGT-MVDLLGRAGNLEEACNMIKAMPVEPDVVIW 289
L++ G+E H M++ F L + T +VD+ + G+LE A + M +E +VV W
Sbjct: 250 RLISVGKEIHGYAMRSGF---DSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSW 305
Query: 290 RALLSA 295
+++ A
Sbjct: 306 NSMIDA 311
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 4/181 (2%)
Query: 20 TYPSLVAALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGECDIARKVFDKM 77
TY S++ A+ H I V +D F +++ K G IAR +FD M
Sbjct: 440 TYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM 499
Query: 78 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 137
R V TWN +I GY + L LF M ++P+G TF SV++ C+ G +
Sbjct: 500 SERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGL 559
Query: 138 WVHGLMLEK-RVKLNYILSAALVDMYAKCGRIDVSKQ-VFDTVARDHVSVWNAMINGLAV 195
+M E ++L+ A+VD+ + GR++ + + + V+V+ AM+ +
Sbjct: 560 KCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI 619
Query: 196 H 196
H
Sbjct: 620 H 620
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/339 (39%), Positives = 202/339 (59%), Gaps = 4/339 (1%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D F + +++ K D A+KVFD+MP R+VVTW LI GYV++ F G+ +F ML
Sbjct: 239 DVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEML 298
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
++V P+ T +SV++ CA +GAL + VH M++ +++N L+D+Y KCG ++
Sbjct: 299 KSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLE 358
Query: 170 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
+ VF+ + +V W AMING A HG A DA +F M +V P+ +TF+ +L AC+
Sbjct: 359 EAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA 418
Query: 230 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 289
H GLV EGR F M+ RF ++P+ +HY MVDL GR G LEEA +I+ MP+EP V+W
Sbjct: 419 HGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVW 478
Query: 290 RALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIG 346
AL +C +H EL ++A + + +L+ SG + LL+N+Y +NW RVR MK
Sbjct: 479 GALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQ 538
Query: 347 GVRKKRGKSWIELGDSIHQFNAADQSHA-EMKAIHRVLE 384
V K G SWIE+ + +F A D E +++ L+
Sbjct: 539 QVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLD 577
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 140/286 (48%), Gaps = 10/286 (3%)
Query: 20 TYPSLVAALISTYARCHQPHIAH-HV--FSRVMDTFSKNLVIESLMKAGECDIARKVFDK 76
T+P L+ A+ R P H H+ F D F +N +I +G D A ++FD
Sbjct: 106 TFPPLLKAVFKL--RDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDG 163
Query: 77 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA 136
+DVVTW +I G+V+N + + F M V + T SV+ ++ +
Sbjct: 164 AEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFG 223
Query: 137 KWVHGLMLEK-RVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAV 195
+ VHGL LE RVK + + ++LVDMY KC D +++VFD + +V W A+I G
Sbjct: 224 RSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQ 283
Query: 196 HGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQL 254
+ VF M +V P+ T +L AC+H G ++ GR H +++N I+
Sbjct: 284 SRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNS--IEINT 341
Query: 255 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
T++DL + G LEEA + + + E +V W A+++ HG
Sbjct: 342 TAGTTLIDLYVKCGCLEEAILVFERLH-EKNVYTWTAMINGFAAHG 386
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 108/254 (42%), Gaps = 4/254 (1%)
Query: 44 VFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLR 103
+F D F L+ A + AR++ ++ + W++LIG + + L
Sbjct: 29 IFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLS 88
Query: 104 L--FRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDM 161
+R M V P TF ++ +L N H +++ + + + +L+
Sbjct: 89 FLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLISG 147
Query: 162 YAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
Y+ G D + ++FD V W AMI+G +G A +A+ F M+ V + +T
Sbjct: 148 YSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTV 207
Query: 222 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP 281
V +LKA V GR + ++ + ++VD+ G+ ++A + MP
Sbjct: 208 VSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP 267
Query: 282 VEPDVVIWRALLSA 295
+VV W AL++
Sbjct: 268 SR-NVVTWTALIAG 280
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 44/275 (16%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
++T + +I+ +K G + A VF+++ ++V TW +I G+ + D LF M
Sbjct: 339 INTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTM 398
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
LS+ V P+ TF +V++ CA HG ++E+ +L LS GR
Sbjct: 399 LSSHVSPNEVTFMAVLSACA-----------HGGLVEEGRRL--FLSMK--------GRF 437
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
++ + DH + M++ GL +A A+ RM +E P ++ + + +C
Sbjct: 438 NMEPKA------DH---YACMVDLFGRKGLLEEAKALIERMPME---PTNVVWGALFGSC 485
Query: 229 SHCGLVNEGREHFNIMQNRFL-IQPQLE-HYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 286
L+++ E +R + +QP Y + +L + N +E + K M +
Sbjct: 486 ----LLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQM--KDQQ 539
Query: 287 VIWRALLSACRIHGKKELAEF-AIANISRLESGDF 320
V+ S + GK L EF A + LES D
Sbjct: 540 VVKSPGFSWIEVKGK--LCEFIAFDDKKPLESDDL 572
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 262 bits (669), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/327 (39%), Positives = 192/327 (58%), Gaps = 3/327 (0%)
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
K E + ARK+FD+ P + + +WN +I GY +N D + LFR M +E P+ T
Sbjct: 366 KLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITC 425
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 182
+++ CA+LGAL KWVH L+ + + +S AL+ MYAKCG I ++++FD + + +
Sbjct: 426 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
WN MI+G +HG +A+ +F M + P +TF+ +L ACSH GLV EG E FN
Sbjct: 486 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 545
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 302
M +R+ +P ++HY MVD+LGRAG+L+ A I+AM +EP +W LL ACRIH
Sbjct: 546 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDT 605
Query: 303 ELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIEL 359
LA + L+ G VLLSN++ + +N+ A VR K + K G + IE+
Sbjct: 606 NLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEI 665
Query: 360 GDSIHQFNAADQSHAEMKAIHRVLEGL 386
G++ H F + DQSH ++K I+ LE L
Sbjct: 666 GETPHVFTSGDQSHPQVKEIYEKLEKL 692
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 116/243 (47%), Gaps = 5/243 (2%)
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
K G+ + +F + D+V +N +I GY N L LF+ ++ + T S
Sbjct: 268 KCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVS 327
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 182
+V G L +HG L+ + +S AL +Y+K I+ ++++FD
Sbjct: 328 LVPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKS 384
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
+ WNAMI+G +GL DAI++F M+ P+ +T IL AC+ G ++ G+ +
Sbjct: 385 LPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD 444
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 302
++++ + + ++ + + G++ EA + M + + V W ++S +HG+
Sbjct: 445 LVRSTDF-ESSIYVSTALIGMYAKCGSIAEARRLFDLM-TKKNEVTWNTMISGYGLHGQG 502
Query: 303 ELA 305
+ A
Sbjct: 503 QEA 505
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 124/266 (46%), Gaps = 11/266 (4%)
Query: 57 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-VEP 115
+++ K + ARKVFD+MP +D + WNT+I GY KN +++ +++FR +++
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 116 DGFTFASVVTGCARLGALCNAKWVHGLMLEKR-VKLNYILSAALVDMYAKCGRIDVSKQV 174
D T ++ A L L +H L + +Y+L+ + +Y+KCG+I + +
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLT-GFISLYSKCGKIKMGSAL 278
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
F + + +NAMI+G +G ++++F + + S T V ++ H L+
Sbjct: 279 FREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI 338
Query: 235 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 294
H +++ FL + T V + +E A + P E + W A++S
Sbjct: 339 YA--IHGYCLKSNFLSHASVSTALTTV--YSKLNEIESARKLFDESP-EKSLPSWNAMIS 393
Query: 295 ACRIHGKKELAEFAIANISRLESGDF 320
+G L E AI+ ++ +F
Sbjct: 394 GYTQNG---LTEDAISLFREMQKSEF 416
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 127/301 (42%), Gaps = 33/301 (10%)
Query: 7 AKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGE 66
A+THA++I+HG+ SL+ L + L G
Sbjct: 37 AQTHAQIILHGFRNDISLLTKLT-----------------------------QRLSDLGA 67
Query: 67 CDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML-SAEVEPDGFTFASVVT 125
AR +F + DV +N L+ G+ N L +F + S +++P+ T+A ++
Sbjct: 68 IYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAIS 127
Query: 126 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 185
+ + +HG + +L + +V MY K R++ +++VFD + +
Sbjct: 128 AASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTIL 187
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLP-DSITFVGILKACSHCGLVNEGREHFNIM 244
WN MI+G + + +++I VF + E+ D+ T + IL A + + G + ++
Sbjct: 188 WNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLA 247
Query: 245 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKEL 304
G + L + G ++ + + +PD+V + A++ +G+ EL
Sbjct: 248 TKTGCYSHDYVLTG-FISLYSKCGKIKMGSALFREFR-KPDIVAYNAMIHGYTSNGETEL 305
Query: 305 A 305
+
Sbjct: 306 S 306
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 261 bits (667), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 142/392 (36%), Positives = 225/392 (57%), Gaps = 8/392 (2%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGEC 67
H++ G+ + LI+ YA+ A VF + D N +I + G+
Sbjct: 105 HSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDM 164
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM-LSAEVEPDGFTFASVVTG 126
A ++FD MP ++V +W T+I G+ +N + + L++F M V+P+ T SV+
Sbjct: 165 KAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPA 224
Query: 127 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSV 185
CA LG L + + G E N + A ++MY+KCG IDV+K++F+ + + ++
Sbjct: 225 CANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCS 284
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 245
WN+MI LA HG +A+ +F++M E PD++TFVG+L AC H G+V +G+E F M+
Sbjct: 285 WNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSME 344
Query: 246 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
I P+LEHYG M+DLLGR G L+EA ++IK MP++PD V+W LL AC HG E+A
Sbjct: 345 EVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
Query: 306 EFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSW-IELGD 361
E A + +LE G+ V++SN+Y + + W R+R +MK + K G S+ +E+G
Sbjct: 405 EIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGV 464
Query: 362 SIHQFNAADQSHAEMKAIHRVLEGLIQRAKFD 393
+H+F D+SH I++VLE + +R K +
Sbjct: 465 DVHKFTVEDKSHPRSYEIYQVLEEIFRRMKLE 496
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 108/283 (38%), Gaps = 45/283 (15%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
ARK+FD +N LI Y + + + + L+ + + P TF + A
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 189
+ + +H + + L+ YAK G + +++VFD +++ V VWNAM
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 190 INGLAVHGLALDAIAVFSRMEVENVL--------------------------------PD 217
I G G A+ +F M +NV P+
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
Query: 218 SITFVGILKACSHCGLVNEGR------EHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLE 271
IT V +L AC++ G + GR N ++ +E Y + G ++
Sbjct: 215 HITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMY-------SKCGMID 267
Query: 272 EACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISR 314
A + + + + ++ W +++ + HGK + A A + R
Sbjct: 268 VAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLR 310
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 258 bits (659), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 212/347 (61%), Gaps = 10/347 (2%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N +I+ K GE + A +F+++P +DV++WNTLIGGY + + L LF+ ML +
Sbjct: 305 NALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 364
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVK---LNYILSAALVDMYAKCGRIDVS 171
P+ T S++ CA LGA+ +W+H + ++KR+K L +L+DMYAKCG I+ +
Sbjct: 365 PNDVTMLSILPACAHLGAIDIGRWIH-VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA 423
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 231
QVF+++ +S WNAMI G A+HG A + +FSRM + PD ITFVG+L ACSH
Sbjct: 424 HQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHS 483
Query: 232 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 291
G+++ GR F M + + P+LEHYG M+DLLG +G +EA MI M +EPD VIW +
Sbjct: 484 GMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCS 543
Query: 292 LLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGV 348
LL AC++HG EL E N+ ++E G +VLLSN+Y S W+ + R ++ G+
Sbjct: 544 LLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGM 603
Query: 349 RKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEG---LIQRAKF 392
+K G S IE+ +H+F D+ H + I+ +LE L+++A F
Sbjct: 604 KKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGF 650
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 145/281 (51%), Gaps = 4/281 (1%)
Query: 26 AALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVV 83
+LIS Y + + AH VF + D S +I+ G + A+K+FD++PV+DVV
Sbjct: 173 TSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVV 232
Query: 84 TWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLM 143
+WN +I GY + + + L LF+ M+ V PD T +VV+ CA+ G++ + VH +
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292
Query: 144 LEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAI 203
+ N + AL+D+Y+KCG ++ + +F+ + V WN +I G L +A+
Sbjct: 293 DDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEAL 352
Query: 204 AVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVD 262
+F M P+ +T + IL AC+H G ++ GR H I + + +++D
Sbjct: 353 LLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 412
Query: 263 LLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 303
+ + G++E A + ++ + + W A++ +HG+ +
Sbjct: 413 MYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRAD 452
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 122/256 (47%), Gaps = 35/256 (13%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
A VF + +++ WNT+ G+ + + L+L+ M+S + P+ +TF V+ CA+
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD-TVARDHVSV--- 185
A + +HG +L+ L+ + +L+ MY + GR++ + +VFD + RD VS
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 186 ---------------------------WNAMINGLAVHGLALDAIAVFSRMEVENVLPDS 218
WNAMI+G A G +A+ +F M NV PD
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 219 ITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMI 277
T V ++ AC+ G + GR+ H I + F L+ ++DL + G LE AC +
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGF--GSNLKIVNALIDLYSKCGELETACGLF 324
Query: 278 KAMPVEPDVVIWRALL 293
+ +P + DV+ W L+
Sbjct: 325 ERLPYK-DVISWNTLI 339
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 258 bits (659), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 142/393 (36%), Positives = 220/393 (55%), Gaps = 17/393 (4%)
Query: 19 ATYPSLVAALISTYARCHQPHIAHHVFSRVMDT--FSKNLVIESLMKAGECDIARKVFDK 76
T +V A + + A + I V R +D F +N +++ + G+ DIA ++F K
Sbjct: 406 TTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGK 465
Query: 77 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-----------VEPDGFTFASVVT 125
M RD+VTWNT+I GYV + D L L M + E ++P+ T +++
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 126 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 185
CA L AL K +H ++ + + + +ALVDMYAKCG + +S++VFD + + +V
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 585
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 245
WN +I +HG +AI + M V+ V P+ +TF+ + ACSH G+V+EG F +M+
Sbjct: 586 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Query: 246 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV-IWRALLSACRIHGKKEL 304
+ ++P +HY +VDLLGRAG ++EA ++ MP + + W +LL A RIH E+
Sbjct: 646 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEI 705
Query: 305 AEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGD 361
E A N+ +LE + +VLL+N+Y S W A VR MK GVRK+ G SWIE GD
Sbjct: 706 GEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGD 765
Query: 362 SIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
+H+F A D SH + + + LE L +R + +G
Sbjct: 766 EVHKFVAGDSSHPQSEKLSGYLETLWERMRKEG 798
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 130/270 (48%), Gaps = 4/270 (1%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
+++F N ++ K G+ ++ + RD+VTWNT++ +N + L+ L R M
Sbjct: 234 LNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREM 293
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEK-RVKLNYILSAALVDMYAKCGR 167
+ VEPD FT +SV+ C+ L L K +H L+ + N + +ALVDMY C +
Sbjct: 294 VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 353
Query: 168 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILK 226
+ ++VFD + + +WNAMI G + + +A+ +F ME +L +S T G++
Sbjct: 354 VLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 413
Query: 227 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 286
AC G + + R L + + T++D+ R G ++ A + M + D+
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ-NTLMDMYSRLGKIDIAMRIFGKME-DRDL 471
Query: 287 VIWRALLSACRIHGKKELAEFAIANISRLE 316
V W +++ E A + + LE
Sbjct: 472 VTWNTMITGYVFSEHHEDALLLLHKMQNLE 501
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 117/245 (47%), Gaps = 13/245 (5%)
Query: 6 AAKTHAKLIVHG-----YATYPSLVAAL--ISTYARCHQPHIAHHVFSRVMDTFS-KNLV 57
A T+ +IV G YA +P+L+ A+ + Q H + F +D+ + N +
Sbjct: 81 AVLTYVDMIVLGIKPDNYA-FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 58 IESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDG 117
+ K G+ KVFD++ R+ V+WN+LI ++ L FR ML VEP
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 118 FTFASVVTGCARLG---ALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
FT SVVT C+ L L K VH L K +LN + LV MY K G++ SK +
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVL 258
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
+ + WN +++ L + L+A+ M +E V PD T +L ACSH ++
Sbjct: 259 LGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEML 318
Query: 235 NEGRE 239
G+E
Sbjct: 319 RTGKE 323
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 133/307 (43%), Gaps = 46/307 (14%)
Query: 85 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 144
W L+ V++ + + + M+ ++PD + F +++ A L + K +H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 145 EKRVKLNYILSA-ALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAI 203
+ ++ + A LV++Y KCG +VFD ++ + WN++I+ L A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 204 AVFSRMEVENVLPDSITFVGILKACSHC----GLVNEGREHFNIMQ----NRFLIQPQLE 255
F M ENV P S T V ++ ACS+ GL+ + H ++ N F+I +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 256 HYGTMVD------LLGRAG------------------NLEEACNMIKAM---PVEPDVVI 288
YG + LLG G L EA ++ M VEPD
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 289 WRALLSACR----IHGKKELAEFAIANISRLESGDFV--LLSNMYCSLKNWHNAERVRNM 342
++L AC + KEL +A+ N S L+ FV L +MYC+ K + RV +
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGS-LDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 343 M---KIG 346
M KIG
Sbjct: 364 MFDRKIG 370
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 55/220 (25%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 67
+ HA I + AT ++ +AL+ YA+C G
Sbjct: 538 EIHAYAIKNNLATDVAVGSALVDMYAKC-----------------------------GCL 568
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
++RKVFD++P ++V+TWN +I Y + + + L R M+ V+P+ TF SV C
Sbjct: 569 QMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 628
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILS------------AALVDMYAKCGRIDVSKQVF 175
+ H M+++ +++ Y++ A +VD+ + GRI + Q+
Sbjct: 629 S-----------HSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLM 677
Query: 176 DTVARD--HVSVWNAMINGLAVH-GLALDAIAVFSRMEVE 212
+ + RD W++++ +H L + IA + +++E
Sbjct: 678 NMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLE 717
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/335 (40%), Positives = 191/335 (57%), Gaps = 3/335 (0%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N I MK G + R++FD+MPV+ ++TWN +I GY +N D L L+ M S+ V
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
PD FT SV++ CA LGA V L+ N +S A + MYA+CG + ++ V
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAV 314
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
FD + + W AMI +HG+ + +F M + PD FV +L ACSH GL
Sbjct: 315 FDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLT 374
Query: 235 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 294
++G E F M+ + ++P EHY +VDLLGRAG L+EA I++MPVEPD +W ALL
Sbjct: 375 DKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLG 434
Query: 295 ACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKK 351
AC+IH ++AE A A + E G +VL+SN+Y KN R+R MM+ RKK
Sbjct: 435 ACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKK 494
Query: 352 RGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGL 386
G S++E +H F A D+SH + + +HR+L+ L
Sbjct: 495 PGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 33/303 (10%)
Query: 5 TAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKA 64
+ + H + G T P ++ ALIS Y +C LV +
Sbjct: 71 SGQQLHCHVTKGGCETEPFVLTALISMYCKC-------------------GLVAD----- 106
Query: 65 GECDIARKVFDKMPVRD--VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
ARKVF++ P V +N LI GY N + D +FR M V D T
Sbjct: 107 -----ARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLG 161
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 182
+V C L + +HG ++ + + + + MY KCG ++ +++FD +
Sbjct: 162 LVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKG 221
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
+ WNA+I+G + +GLA D + ++ +M+ V PD T V +L +C+H G G E
Sbjct: 222 LITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGK 281
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 302
++++ + P + + + R GNL +A + MPV+ +V W A++ +HG
Sbjct: 282 LVESNGFV-PNVFVSNASISMYARCGNLAKARAVFDIMPVK-SLVSWTAMIGCYGMHGMG 339
Query: 303 ELA 305
E+
Sbjct: 340 EIG 342
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 106/219 (48%), Gaps = 6/219 (2%)
Query: 85 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 144
WN + F + + L+R ML + PD F+F ++ CA L + + +H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 145 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR-DHVSV-WNAMINGLAVHGLALDA 202
+ + + AL+ MY KCG + +++VF+ + +SV +NA+I+G + DA
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 203 IAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMV 261
+F RM+ V DS+T +G++ C+ + GR H ++ + ++ + +
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGG--LDSEVAVLNSFI 198
Query: 262 DLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
+ + G++E + MPV+ ++ W A++S +G
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVK-GLITWNAVISGYSQNG 236
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 18/193 (9%)
Query: 17 GYATYPSLVAALISTYARCHQPHIAHHVFSRV------MDTFSKNLVIESLMKAGECDIA 70
G P + +++S+ A I H V V + F N I + G A
Sbjct: 252 GVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKA 311
Query: 71 RKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARL 130
R VFD MPV+ +V+W +IG Y + GL LF M+ + PDG F V++ C+
Sbjct: 312 RAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHS 371
Query: 131 GALCNAKWVHGLMLEKRVKLNYILS------AALVDMYAKCGRIDVSKQVFDTVA-RDHV 183
G GL L + +K Y L + LVD+ + GR+D + + +++
Sbjct: 372 GLT-----DKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDG 426
Query: 184 SVWNAMINGLAVH 196
+VW A++ +H
Sbjct: 427 AVWGALLGACKIH 439
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/323 (40%), Positives = 198/323 (61%), Gaps = 9/323 (2%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
ARKVFD++P DVV W+ L+ GYV+ +GL +FR ML +EPD F+ + +T CA+
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ 230
Query: 130 LGALCNAKWVHGLMLEKR-VKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNA 188
+GAL KW+H + +K ++ + + ALVDMYAKCG I+ + +VF + R +V W A
Sbjct: 231 VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAA 290
Query: 189 MINGLAVHGLALDAIAVFSRMEVEN-VLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 247
+I G A +G A A+ R+E E+ + PDS+ +G+L AC+H G + EGR M+ R
Sbjct: 291 LIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEAR 350
Query: 248 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEF 307
+ I P+ EHY +VDL+ RAG L++A N+I+ MP++P +W ALL+ CR H EL E
Sbjct: 351 YEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 410
Query: 308 AIANISRLESGD-------FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELG 360
A+ N+ LE G+ V LSN+Y S++ A +VR M++ GVRK G S +E+
Sbjct: 411 AVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVD 470
Query: 361 DSIHQFNAADQSHAEMKAIHRVL 383
++ +F + D SH + IH V+
Sbjct: 471 GNVTKFVSGDVSHPNLLQIHTVI 493
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 136/315 (43%), Gaps = 33/315 (10%)
Query: 9 THAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECD 68
TH+ I+HG ++ L++ + H P++ H
Sbjct: 30 THSLFIIHGLHRNTYAISKLLTAF--LHLPNLNKHF-----------------------H 64
Query: 69 IARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE---PDGFTFASVVT 125
A +FD + + + ++T+I ++ + GLR F M+ E E P TF ++
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIV 124
Query: 126 GCARLGALCNAKWVHGLMLEKRVKL-NYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS 184
C + K +H +++ V L + + ++ +Y + + +++VFD + + V
Sbjct: 125 ACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVV 184
Query: 185 VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIM 244
W+ ++NG GL + + VF M V+ + PD + L AC+ G + +G+ +
Sbjct: 185 KWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFV 244
Query: 245 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKEL 304
+ + I+ + +VD+ + G +E A + K + +V W AL+ +G
Sbjct: 245 KKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL-TRRNVFSWAALIGGYAAYG---Y 300
Query: 305 AEFAIANISRLESGD 319
A+ A+ + RLE D
Sbjct: 301 AKKAMTCLERLERED 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 14/173 (8%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYV------KNVRFLDGLR 103
D F +++ K G + A +VF K+ R+V +W LIGGY K + L+ L
Sbjct: 253 DVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLE 312
Query: 104 LFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK-WVHGLMLEKRVKLNYILSAALVDMY 162
G ++PD V+ CA G L + + + + + + +VD+
Sbjct: 313 REDG-----IKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLM 367
Query: 163 AKCGRIDVSKQVFDTVA-RDHVSVWNAMINGLAVH-GLALDAIAVFSRMEVEN 213
+ GR+D + + + + + SVW A++NG H + L +AV + +++E
Sbjct: 368 CRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEK 420
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/382 (37%), Positives = 222/382 (58%), Gaps = 8/382 (2%)
Query: 12 KLIVHGYATYPSLV--AALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDI 69
+LI T+ SL+ +A +++ Q H + +D F+ + +I+
Sbjct: 448 RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKD 507
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
+R VFD+M V+D+V WN++ GYV+ + L LF + + PD FTFA++VT
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGN 567
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 189
L ++ + H +L++ ++ N ++ AL+DMYAKCG + + + FD+ A V WN++
Sbjct: 568 LASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSV 627
Query: 190 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 249
I+ A HG A+ + +M E + P+ ITFVG+L ACSH GLV +G + F +M RF
Sbjct: 628 ISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFG 686
Query: 250 IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAI 309
I+P+ EHY MV LLGRAG L +A +I+ MP +P ++WR+LLS C G ELAE A
Sbjct: 687 IEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHA- 745
Query: 310 ANISRL----ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQ 365
A ++ L +SG F +LSN+Y S W A++VR MK+ GV K+ G+SWI + +H
Sbjct: 746 AEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHI 805
Query: 366 FNAADQSHAEMKAIHRVLEGLI 387
F + D+SH + I+ VL+ L+
Sbjct: 806 FLSKDKSHCKANQIYEVLDDLL 827
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 146/289 (50%), Gaps = 8/289 (2%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
MD N++I+S +K G A K+F+ MP +++++W TL+ GY +N + + LF M
Sbjct: 282 MDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM 341
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
++PD + +S++T CA L AL VH ++ + + ++ +L+DMYAKC +
Sbjct: 342 SKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCL 401
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLAL---DAIAVFSRMEVENVLPDSITFVGIL 225
+++VFD A V ++NAMI G + G +A+ +F M + P +TFV +L
Sbjct: 402 TDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461
Query: 226 KACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 285
+A + + ++ +M ++ + + ++D+ L+++ + M V+ D
Sbjct: 462 RASASLTSLGLSKQIHGLM-FKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-D 519
Query: 286 VVIWRALLSACRIHGKKE--LAEFAIANISRLESGDFVLLSNMYCSLKN 332
+VIW ++ + + E L F +SR E D +NM + N
Sbjct: 520 LVIWNSMFAGYVQQSENEEALNLFLELQLSR-ERPDEFTFANMVTAAGN 567
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 134/275 (48%), Gaps = 13/275 (4%)
Query: 37 QPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNV 96
Q + F R D + L+I+ +K G D AR VFD +P + VTW T+I G VK
Sbjct: 171 QSFLVKSGFDR--DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 97 RFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSA 156
R L+LF ++ V PDG+ ++V++ C+ L L K +H +L ++++ L
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 157 ALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLP 216
L+D Y KCGR+ + ++F+ + ++ W +++G + L +A+ +F+ M + P
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 217 DSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQL--EHYGT--MVDLLGRAGNLEE 272
D IL +C+ + F + + I+ L + Y T ++D+ + L +
Sbjct: 349 DMYACSSILTSCASLHALG-----FGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTD 403
Query: 273 ACNMIKAMPVEPDVVIWRALLSA-CRIHGKKELAE 306
A + DVV++ A++ R+ + EL E
Sbjct: 404 ARKVFDIFAA-ADVVLFNAMIEGYSRLGTQWELHE 437
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 127/260 (48%), Gaps = 7/260 (2%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVK---NVRFLDGLRLFR 106
D++ N +I+ K ARKVFD DVV +N +I GY + + L +FR
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 107 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 166
M + P TF S++ A L +L +K +HGLM + + L+ +AL+D+Y+ C
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY 503
Query: 167 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 226
+ S+ VFD + + +WN+M G +A+ +F +++ PD TF ++
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
Query: 227 ACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 285
A + V G+E H +++ P + + ++D+ + G+ E+A + D
Sbjct: 564 AAGNLASVQLGQEFHCQLLKRGLECNPYITN--ALLDMYAKCGSPEDAHKAFDS-AASRD 620
Query: 286 VVIWRALLSACRIHGKKELA 305
VV W +++S+ HG+ + A
Sbjct: 621 VVCWNSVISSYANHGEGKKA 640
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 142/304 (46%), Gaps = 20/304 (6%)
Query: 36 HQPHIAHH---VFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGY 92
H ++ H V+ +DT+ N++I +AG ARKVF+KMP R++V+W+T++
Sbjct: 61 HYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSAC 120
Query: 93 VKNVRFLDGLRLFRGMLSAEVE-PDGFTFASVVTGCARLGALCNAKW----VHGLMLEKR 147
+ + + L +F + P+ + +S + C+ L +W + +++
Sbjct: 121 NHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSG 178
Query: 148 VKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFS 207
+ + L+D Y K G ID ++ VFD + W MI+G G + ++ +F
Sbjct: 179 FDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFY 238
Query: 208 RMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGR 266
++ +NV+PD +L ACS + G++ H +I+ R+ ++ ++D +
Sbjct: 239 QLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL--RYGLEMDASLMNVLIDSYVK 296
Query: 267 AGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGDFVLLSNM 326
G + A + MP +++ W LLS + + + A ++S+ F L +M
Sbjct: 297 CGRVIAAHKLFNGMP-NKNIISWTTLLSGYKQNALHKEAMELFTSMSK-----FGLKPDM 350
Query: 327 Y-CS 329
Y CS
Sbjct: 351 YACS 354
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 80/189 (42%), Gaps = 30/189 (15%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDI 69
H +L+ G P + AL+ YA+C P AH
Sbjct: 578 HCQLLKRGLECNPYITNALLDMYAKCGSPEDAH--------------------------- 610
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
K FD RDVV WN++I Y + L++ M+S +EP+ TF V++ C+
Sbjct: 611 --KAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSH 668
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS-VWNA 188
G + + LML ++ +V + + GR++ ++++ + + + VW +
Sbjct: 669 AGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRS 728
Query: 189 MINGLAVHG 197
+++G A G
Sbjct: 729 LLSGCAKAG 737
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/396 (35%), Positives = 223/396 (56%), Gaps = 5/396 (1%)
Query: 2 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDT--FSKNLVIE 59
D + HA+++ G+ + S+ ++ Y + + A +F + D + ++I
Sbjct: 138 DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMIN 197
Query: 60 SLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFT 119
+ G A ++F + ++D V W +I G V+N L LFR M V + FT
Sbjct: 198 CYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFT 257
Query: 120 FASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA 179
V++ C+ LGAL +WVH + +R++L+ + AL++MY++CG I+ +++VF +
Sbjct: 258 AVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMR 317
Query: 180 RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE 239
V +N MI+GLA+HG +++AI F M P+ +T V +L ACSH GL++ G E
Sbjct: 318 DKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLE 377
Query: 240 HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIH 299
FN M+ F ++PQ+EHYG +VDLLGR G LEEA I+ +P+EPD ++ LLSAC+IH
Sbjct: 378 VFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIH 437
Query: 300 GKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSW 356
G EL E + E SG +VLLSN+Y S W + +R M+ G+ K+ G S
Sbjct: 438 GNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCST 497
Query: 357 IELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKF 392
IE+ + IH+F D +H +AI++ L+ L + +F
Sbjct: 498 IEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILRF 533
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 142/315 (45%), Gaps = 51/315 (16%)
Query: 27 ALISTYARCHQPHIAH--HVFSRVMDTFSKN--LVIESLMKA----GECDIARKVFDKMP 78
LIS C +IAH + ++++ TF V+ L++ D A VF +
Sbjct: 31 TLISVLRSC--KNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVS 88
Query: 79 VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC----------- 127
+V + +I G+V + R DG+ L+ M+ V PD + SV+ C
Sbjct: 89 NPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQ 148
Query: 128 --------------------ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 167
+ G L NAK + M ++ +++ + +++ Y++CG
Sbjct: 149 VLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDR----DHVAATVMINCYSECGF 204
Query: 168 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
I + ++F V W AMI+GL + A+ +F M++ENV + T V +L A
Sbjct: 205 IKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSA 264
Query: 228 CSHCGLVNEGREHFNIMQNRFLIQPQLEHY--GTMVDLLGRAGNLEEACNMIKAMPVEPD 285
CS G + GR + ++N+ + +L ++ ++++ R G++ EA + + M + D
Sbjct: 265 CSDLGALELGRWVHSFVENQRM---ELSNFVGNALINMYSRCGDINEARRVFRVMR-DKD 320
Query: 286 VVIWRALLSACRIHG 300
V+ + ++S +HG
Sbjct: 321 VISYNTMISGLAMHG 335
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 226/396 (57%), Gaps = 16/396 (4%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESL------ 61
+ H+ ++ G+ ++ ALIS Y+RC A + + +K+L IE
Sbjct: 300 QIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQ---RGTKDLKIEGFTALLDG 356
Query: 62 -MKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTF 120
+K G+ + A+ +F + RDVV W +I GY ++ + + + LFR M+ P+ +T
Sbjct: 357 YIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTL 416
Query: 121 ASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-- 178
A++++ + L +L + K +HG ++ + +S AL+ MYAK G I + + FD +
Sbjct: 417 AAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRC 476
Query: 179 ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR 238
RD VS W +MI LA HG A +A+ +F M +E + PD IT+VG+ AC+H GLVN+GR
Sbjct: 477 ERDTVS-WTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGR 535
Query: 239 EHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRI 298
++F++M++ I P L HY MVDL GRAG L+EA I+ MP+EPDVV W +LLSACR+
Sbjct: 536 QYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRV 595
Query: 299 HGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKS 355
H +L + A + LE SG + L+N+Y + W A ++R MK G V+K++G S
Sbjct: 596 HKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFS 655
Query: 356 WIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 391
WIE+ +H F D +H E I+ ++ + K
Sbjct: 656 WIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIK 691
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 157/338 (46%), Gaps = 39/338 (11%)
Query: 5 TAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLM 62
T K H+ ++ G S+ +L++ YA+C P +A VF R V D S N +I M
Sbjct: 164 TGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHM 223
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML-SAEVEPDGFTFA 121
+ G+ D+A F++M RD+VTWN++I G+ + L L +F ML + + PD FT A
Sbjct: 224 QVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLA 283
Query: 122 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV----------- 170
SV++ CA L LC K +H ++ ++ I+ AL+ MY++CG ++
Sbjct: 284 SVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTK 343
Query: 171 ----------------------SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSR 208
+K +F ++ V W AMI G HG +AI +F
Sbjct: 344 DLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRS 403
Query: 209 MEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRA 267
M P+S T +L S ++ G++ H + +++ + + + ++ + +A
Sbjct: 404 MVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSN--ALITMYAKA 461
Query: 268 GNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
GN+ A + E D V W +++ A HG E A
Sbjct: 462 GNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 162/362 (44%), Gaps = 67/362 (18%)
Query: 5 TAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLM 62
TA H ++I G L+ L++ Y++ A +F + FS N V+ +
Sbjct: 32 TAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYS 91
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
K G+ D + FD++P RD V+W T+I GY ++ +R+ M+ +EP FT +
Sbjct: 92 KRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTN 151
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD-TVARD 181
V+ A + K VH +++ ++ N +S +L++MYAKCG ++K VFD V RD
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211
Query: 182 ----------HVSV--------------------WNAMINGLAVHGLALDAIAVFSRMEV 211
H+ V WN+MI+G G L A+ +FS+M
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR 271
Query: 212 ENVL-PDSITFVGILKACS-----------HCGLVNEGREHFNIMQN------------- 246
+++L PD T +L AC+ H +V G + I+ N
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331
Query: 247 --RFLIQP------QLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRI 298
R LI+ ++E + ++D + G++ +A N+ ++ + DVV W A++
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLK-DRDVVAWTAMIVGYEQ 390
Query: 299 HG 300
HG
Sbjct: 391 HG 392
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 255 bits (652), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 216/367 (58%), Gaps = 11/367 (2%)
Query: 26 AALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVV 83
+++ S YA+ + A +F + D + N++I +K E D AR++FD+ +DVV
Sbjct: 182 SSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVV 241
Query: 84 TWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLM 143
TWN +I GYV + L +F+ M A PD T S+++ CA LG L K +H +
Sbjct: 242 TWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI 301
Query: 144 LE-----KRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGL 198
LE + + + AL+DMYAKCG ID + +VF V +S WN +I GLA+H
Sbjct: 302 LETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH- 360
Query: 199 ALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG 258
A +I +F M+ V P+ +TF+G++ ACSH G V+EGR++F++M++ + I+P ++HYG
Sbjct: 361 AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYG 420
Query: 259 TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFA---IANISRL 315
MVD+LGRAG LEEA +++M +EP+ ++WR LL AC+I+G EL ++A + ++ +
Sbjct: 421 CMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKD 480
Query: 316 ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAE 375
ESGD+VLLSN+Y S W ++VR M V+K G S IE D S E
Sbjct: 481 ESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDKLMMRYLLSSEPE 540
Query: 376 MKAIHRV 382
++ R+
Sbjct: 541 SRSRGRI 547
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 137/305 (44%), Gaps = 39/305 (12%)
Query: 5 TAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKA 64
T + HA ++V+G + S+V LI +S +L + +K
Sbjct: 27 TLKQIHASMVVNGLMSNLSVVGELI----------------------YSASLSVPGALK- 63
Query: 65 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVV 124
A K+FD++P DV N ++ G ++++ + L+ M V PD +TF V+
Sbjct: 64 ----YAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 125 TGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS 184
C++L N HG ++ LN + AL+ +A CG + ++ ++FD A+ H
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 185 VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIM 244
W++M +G A G +A+ +F M + D + + ++ C C ++ RE F
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSARELF--- 232
Query: 245 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSACRIHGK 301
+RF + + + M+ G +EA + K M PDVV +LLSAC + G
Sbjct: 233 -DRF-TEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGD 290
Query: 302 KELAE 306
E +
Sbjct: 291 LETGK 295
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 254 bits (650), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 216/384 (56%), Gaps = 14/384 (3%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 67
+ H+ ++ G A+ S+ +LI Y++C A + SR + + +E L
Sbjct: 503 EIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEEL------ 556
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
K+ +K V+WN++I GYV + D LF M+ + PD FT+A+V+ C
Sbjct: 557 ---EKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC 613
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 187
A L + K +H +++K ++ + + + LVDMY+KCG + S+ +F+ R WN
Sbjct: 614 ANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWN 673
Query: 188 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 247
AMI G A HG +AI +F RM +EN+ P+ +TF+ IL+AC+H GL+++G E+F +M+
Sbjct: 674 AMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRD 733
Query: 248 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK-ELAE 306
+ + PQL HY MVD+LG++G ++ A +I+ MP E D VIWR LL C IH E+AE
Sbjct: 734 YGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAE 793
Query: 307 FAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSI 363
A A + RL+ D + LLSN+Y W +R M+ ++K+ G SW+EL D +
Sbjct: 794 EATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDEL 853
Query: 364 HQFNAADQSHAEMKAIHRVLEGLI 387
H F D++H + I+ L GLI
Sbjct: 854 HVFLVGDKAHPRWEEIYEEL-GLI 876
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 136/281 (48%), Gaps = 25/281 (8%)
Query: 46 SRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLF 105
S +D N I+ K A +VFD+M RD V+WN +I + +N + + L LF
Sbjct: 412 SLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLF 471
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
ML + +EPD FTF S++ C G+L +H +++ + N + +L+DMY+KC
Sbjct: 472 VSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKC 530
Query: 166 GRIDVSKQVFDT-VARDHVS-------------------VWNAMINGLAVHGLALDAIAV 205
G I+ ++++ R +VS WN++I+G + + DA +
Sbjct: 531 GMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQML 590
Query: 206 FSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLL 264
F+RM + PD T+ +L C++ G++ H +++ +Q + T+VD+
Sbjct: 591 FTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE--LQSDVYICSTLVDMY 648
Query: 265 GRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
+ G+L ++ M + + D V W A++ HGK E A
Sbjct: 649 SKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEA 688
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 110/224 (49%), Gaps = 2/224 (0%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAG 65
+ HA +I+ G+ ++ L+ Y A VF + + D S N +I K+
Sbjct: 69 QAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSN 128
Query: 66 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 125
+ A F+ MPVRDVV+WN+++ GY++N L + +F M +E DG TFA ++
Sbjct: 129 DMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILK 188
Query: 126 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 185
C+ L +HG+++ + + ++AL+DMYAK R S +VF + +
Sbjct: 189 VCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVS 248
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
W+A+I G + L A+ F M+ N + +L++C+
Sbjct: 249 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 116/255 (45%), Gaps = 4/255 (1%)
Query: 72 KVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLG 131
+VF +P ++ V+W+ +I G V+N L+ F+ M +ASV+ CA L
Sbjct: 236 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 295
Query: 132 ALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMIN 191
L +H L+ + I+ A +DMYAKC + ++ +FD + +NAMI
Sbjct: 296 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMIT 355
Query: 192 GLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQ 251
G + A+ +F R+ + D I+ G+ +AC+ ++EG + + + L
Sbjct: 356 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL-S 414
Query: 252 PQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIAN 311
+ +D+ G+ L EA + M D V W A+++A +GK F +
Sbjct: 415 LDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNGKGYETLFLFVS 473
Query: 312 I--SRLESGDFVLLS 324
+ SR+E +F S
Sbjct: 474 MLRSRIEPDEFTFGS 488
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 101/205 (49%), Gaps = 4/205 (1%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
A+ +FD + ++N +I GY + L LF ++S+ + D + + V CA
Sbjct: 335 AQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACAL 394
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 189
+ L ++GL ++ + L+ ++ A +DMY KC + + +VFD + R WNA+
Sbjct: 395 VKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAI 454
Query: 190 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRF 248
I +G + + +F M + PD TF ILKAC+ G + G E H +I+++
Sbjct: 455 IAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGM 513
Query: 249 LIQPQLEHYGTMVDLLGRAGNLEEA 273
+ +++D+ + G +EEA
Sbjct: 514 ASNSSVG--CSLIDMYSKCGMIEEA 536
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/368 (38%), Positives = 208/368 (56%), Gaps = 9/368 (2%)
Query: 27 ALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVT 84
+IS Y A +F ++ D S N V+E G+ + +VFD MP R+V +
Sbjct: 95 TMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFS 154
Query: 85 WNTLIGGYVKNVRFLDGLRLFRGMLS-AEVEPDGFTFASVVTGCARLGALCNAKWVH--G 141
WN LI GY +N R + L F+ M+ V P+ T V++ CA+LGA KWVH G
Sbjct: 155 WNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYG 214
Query: 142 LMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALD 201
L K++ + AL+DMY KCG I+++ +VF + R + WN MINGLA HG +
Sbjct: 215 ETLGYN-KVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTE 273
Query: 202 AIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMV 261
A+ +F M+ + PD +TFVG+L AC H GLV +G +FN M F I P++EH G +V
Sbjct: 274 ALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVV 333
Query: 262 DLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE---SG 318
DLL RAG L +A I MPV+ D VIW LL A +++ K ++ E A+ + +LE
Sbjct: 334 DLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPA 393
Query: 319 DFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKA 378
+FV+LSN+Y + +A R++ M+ G +K+ G SWIE D + +F ++ + H +
Sbjct: 394 NFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEE 453
Query: 379 IHRVLEGL 386
+ R+L L
Sbjct: 454 LQRILREL 461
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 108/233 (46%), Gaps = 12/233 (5%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
A KVF +M ++VV W ++I GY+ N + R F E D + ++++G
Sbjct: 47 ANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYF----DLSPERDIVLWNTMISGYIE 102
Query: 130 LGALCNAKWVHGLMLEKRV-KLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNA 188
+G + A+ + M + V N +L YA G ++ ++VFD + +V WN
Sbjct: 103 MGNMLEARSLFDQMPCRDVMSWNTVLEG-----YANIGDMEACERVFDDMPERNVFSWNG 157
Query: 189 MINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 247
+I G A +G + + F RM E +V+P+ T +L AC+ G + G+ +
Sbjct: 158 LIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETL 217
Query: 248 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
+ + ++D+ G+ G +E A + K + D++ W +++ HG
Sbjct: 218 GYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK-RRDLISWNTMINGLAAHG 269
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 253 bits (647), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/324 (38%), Positives = 192/324 (59%), Gaps = 3/324 (0%)
Query: 71 RKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARL 130
+ +F KM + +V+WN +IG Y+KN ++ + L+ M + EPD + SV+ C
Sbjct: 263 KDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDT 322
Query: 131 GALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMI 190
AL K +HG + K++ N +L AL+DMYAKCG ++ ++ VF+ + V W AMI
Sbjct: 323 SALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMI 382
Query: 191 NGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLI 250
+ G DA+A+FS+++ ++PDSI FV L ACSH GL+ EGR F +M + + I
Sbjct: 383 SAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKI 442
Query: 251 QPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIA 310
P+LEH MVDLLGRAG ++EA I+ M +EP+ +W ALL ACR+H ++ A
Sbjct: 443 TPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAAD 502
Query: 311 NISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFN 367
+ +L +SG +VLLSN+Y W +RN+MK G++K G S +E+ IH F
Sbjct: 503 KLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFL 562
Query: 368 AADQSHAEMKAIHRVLEGLIQRAK 391
D+SH + I+R L+ L+++ K
Sbjct: 563 VGDRSHPQSDEIYRELDVLVKKMK 586
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 10/232 (4%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
ARKVFD++P R+V+ N +I YV N + +G+++F M V PD +TF V+ C+
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSC 152
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 189
G + + +HG + + + LV MY KCG + ++ V D ++R V WN++
Sbjct: 153 SGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSL 212
Query: 190 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF- 248
+ G A + DA+ V ME + D+ T +L A S N E+ +++ F
Sbjct: 213 VVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS-----NTTTENVMYVKDMFF 267
Query: 249 -LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV---EPDVVIWRALLSAC 296
+ + L + M+ + + EA + M EPD V ++L AC
Sbjct: 268 KMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 128/270 (47%), Gaps = 38/270 (14%)
Query: 52 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 111
F N ++ K G AR V D+M RDVV+WN+L+ GY +N RF D L + R M S
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESV 235
Query: 112 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
++ D T AS+ L A+ N +M K DM+ K G+
Sbjct: 236 KISHDAGTMASL------LPAVSNTT-TENVMYVK-------------DMFFKMGK---- 271
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 231
+ VS WN MI + + ++A+ ++SRME + PD+++ +L AC
Sbjct: 272 --------KSLVS-WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDT 322
Query: 232 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 291
++ G++ ++ + LI P L ++D+ + G LE+A ++ + M DVV W A
Sbjct: 323 SALSLGKKIHGYIERKKLI-PNLLLENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTA 380
Query: 292 LLSACRIHGKKELAEFAIANISRLESGDFV 321
++SA G+ A+A S+L+ V
Sbjct: 381 MISAYGFSGR---GCDAVALFSKLQDSGLV 407
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 54 KNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV 113
+N +I+ K G + AR VF+ M RDVV+W +I Y + R D + LF + + +
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406
Query: 114 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS--AALVDMYAKCGRI-DV 170
PD F + + C+ G L + LM + K+ L A +VD+ + G++ +
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTD-HYKITPRLEHLACMVDLLGRAGKVKEA 465
Query: 171 SKQVFDTVARDHVSVWNAMINGLAVH 196
+ + D + VW A++ VH
Sbjct: 466 YRFIQDMSMEPNERVWGALLGACRVH 491
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
Query: 137 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 196
+ VH ++ + ++ N L L+ YA + +++VFD + +V + N MI +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 197 GLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEH 256
G + + VF M NV PD TF +LKACS G + GR+ + + + L
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRK-IHGSATKVGLSSTLFV 177
Query: 257 YGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
+V + G+ G L EA ++ M DVV W +L+
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLV 213
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 207/375 (55%), Gaps = 9/375 (2%)
Query: 27 ALISTYARCHQPHIAHHVFS----RVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDV 82
A+++ Y + + +A +F R + T+ N +I + G+ A+ +FDKMP RD
Sbjct: 317 AMLAGYVQGERMEMAKELFDVMPCRNVSTW--NTMITGYAQCGKISEAKNLFDKMPKRDP 374
Query: 83 VTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGL 142
V+W +I GY ++ + LRLF M + +F+S ++ CA + AL K +HG
Sbjct: 375 VSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 434
Query: 143 MLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDA 202
+++ + + AL+ MY KCG I+ + +F +A + WN MI G + HG A
Sbjct: 435 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVA 494
Query: 203 IAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVD 262
+ F M+ E + PD T V +L ACSH GLV++GR++F M + + P +HY MVD
Sbjct: 495 LRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVD 554
Query: 263 LLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE---SGD 319
LLGRAG LE+A N++K MP EPD IW LL A R+HG ELAE A I +E SG
Sbjct: 555 LLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGM 614
Query: 320 FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAI 379
+VLLSN+Y S W + ++R M+ GV+K G SWIE+ + H F+ D+ H E I
Sbjct: 615 YVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEI 674
Query: 380 HRVLEGLIQRAKFDG 394
LE L R K G
Sbjct: 675 FAFLEELDLRMKKAG 689
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 143/327 (43%), Gaps = 64/327 (19%)
Query: 29 ISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWN 86
IS+Y R + + A VF R+ + S N +I ++ GE ++ARK+FD+MP RD+V+WN
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWN 130
Query: 87 TLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEK 146
+I GYV+N LF M E D ++ ++++G A+ G + +A+ V M EK
Sbjct: 131 VMIKGYVRNRNLGKARELFEIM----PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK 186
Query: 147 R-VKLNYILSA--------------------------ALVDMYAKCGRIDVSKQVFDTVA 179
V N +LSA L+ + K +I ++Q FD++
Sbjct: 187 NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMN 246
Query: 180 RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE 239
V WN +I G A G +A +F V++V T+ ++ +V E RE
Sbjct: 247 VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF----TWTAMVSGYIQNRMVEEARE 302
Query: 240 HFNIMQNR------------------------FLIQP--QLEHYGTMVDLLGRAGNLEEA 273
F+ M R F + P + + TM+ + G + EA
Sbjct: 303 LFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEA 362
Query: 274 CNMIKAMPVEPDVVIWRALLSACRIHG 300
N+ MP + D V W A+++ G
Sbjct: 363 KNLFDKMP-KRDPVSWAAMIAGYSQSG 388
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 128/281 (45%), Gaps = 23/281 (8%)
Query: 16 HGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFD 75
HG A + SL A T + + + D N+ I S M+ G C+ A +VF
Sbjct: 32 HGAANFHSLKRA---TQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFK 88
Query: 76 KMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCN 135
+MP V++N +I GY++N F +LF M E D ++ ++ G R L
Sbjct: 89 RMPRWSSVSYNGMISGYLRNGEFELARKLFDEM----PERDLVSWNVMIKGYVRNRNLGK 144
Query: 136 AKWVHGLMLEKRV-KLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLA 194
A+ + +M E+ V N +LS YA+ G +D ++ VFD + + WNA+++
Sbjct: 145 ARELFEIMPERDVCSWNTMLSG-----YAQNGCVDDARSVFDRMPEKNDVSWNALLSAYV 199
Query: 195 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQL 254
+ +A +F E ++ + G +K + E R+ F+ M R ++
Sbjct: 200 QNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKK----IVEARQFFDSMNVRDVVS--- 252
Query: 255 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
+ T++ ++G ++EA + PV+ DV W A++S
Sbjct: 253 --WNTIITGYAQSGKIDEARQLFDESPVQ-DVFTWTAMVSG 290
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/323 (39%), Positives = 198/323 (61%), Gaps = 9/323 (2%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
ARKVFD++P DVV W+ L+ GYV+ +GL +F+ ML +EPD F+ + +T CA+
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQ 230
Query: 130 LGALCNAKWVHGLMLEKR-VKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNA 188
+GAL KW+H + +KR ++ + + ALVDMYAKCG I+ + +VF+ + R +V W A
Sbjct: 231 VGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAA 290
Query: 189 MINGLAVHGLALDAIAVFSRMEVEN-VLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 247
+I G A +G A A R+E E+ + PDS+ +G+L AC+H G + EGR M+ R
Sbjct: 291 LIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEAR 350
Query: 248 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEF 307
+ I P+ EHY +VDL+ RAG L++A ++I+ MP++P +W ALL+ CR H EL E
Sbjct: 351 YGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 410
Query: 308 AIANISRLESGD-------FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELG 360
A+ N+ LE G+ V LSN+Y S++ A +VR M++ G+RK G S +E+
Sbjct: 411 AVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVD 470
Query: 361 DSIHQFNAADQSHAEMKAIHRVL 383
+ +F + D SH + IH ++
Sbjct: 471 GIVTKFVSGDVSHPNLLQIHTLI 493
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 145/343 (42%), Gaps = 34/343 (9%)
Query: 9 THAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECD 68
TH+ I+HG ++ L++ + H P++ H
Sbjct: 30 THSLFIIHGLHRNTYAISKLLTAF--LHLPNLNKHF-----------------------H 64
Query: 69 IARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE---PDGFTFASVVT 125
A +FD + + + ++T+I ++ + GLR F M+ E E P TF ++
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIV 124
Query: 126 GCARLGALCNAKWVHGLMLEKRVKL-NYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS 184
C + K +H +++ V L + + ++ +Y + + +++VFD + + V
Sbjct: 125 ACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVV 184
Query: 185 VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIM 244
W+ ++NG GL + + VF M V + PD + L AC+ G + +G+ +
Sbjct: 185 KWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFV 244
Query: 245 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKEL 304
+ + I+ + +VD+ + G +E A + + + +V W AL+ +G +
Sbjct: 245 KKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL-TRRNVFSWAALIGGYAAYGYAKK 303
Query: 305 AEFAIANISRLESG---DFVLLSNMYCSLKNWHNAERVRNMMK 344
A + I R E G D V+L + + + E R M++
Sbjct: 304 ATTCLDRIER-EDGIKPDSVVLLGVLAACAHGGFLEEGRTMLE 345
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 24/178 (13%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYV------KNVRFLDGLR 103
D F +++ K G + A +VF+K+ R+V +W LIGGY K LD +
Sbjct: 253 DVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIE 312
Query: 104 LFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS------AA 157
G ++PD V+ CA G L + MLE ++ Y ++ +
Sbjct: 313 REDG-----IKPDSVVLLGVLAACAHGGFLEEGR----TMLEN-MEARYGITPKHEHYSC 362
Query: 158 LVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNAMINGLAVH-GLALDAIAVFSRMEVEN 213
+VD+ + GR+D + + + + + SVW A++NG H + L +AV + +++E
Sbjct: 363 IVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEK 420
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/352 (37%), Positives = 202/352 (57%), Gaps = 13/352 (3%)
Query: 43 HVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGL 102
HV S ++D +++ G D A+ VFD + R+ V+WN LI G+ + L
Sbjct: 197 HVGSALLDLYTR---------YGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKAL 247
Query: 103 RLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMY 162
LF+GML P F++AS+ C+ G L KWVH M++ KL L+DMY
Sbjct: 248 ELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMY 307
Query: 163 AKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFV 222
AK G I ++++FD +A+ V WN+++ A HG +A+ F M + P+ I+F+
Sbjct: 308 AKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFL 367
Query: 223 GILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV 282
+L ACSH GL++EG ++ +M+ ++ P+ HY T+VDLLGRAG+L A I+ MP+
Sbjct: 368 SVLTACSHSGLLDEGWHYYELMKKDGIV-PEAWHYVTVVDLLGRAGDLNRALRFIEEMPI 426
Query: 283 EPDVVIWRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERV 339
EP IW+ALL+ACR+H EL +A ++ L+ D V+L N+Y S W++A RV
Sbjct: 427 EPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARV 486
Query: 340 RNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 391
R MK GV+K+ SW+E+ ++IH F A D+ H + + I R E ++ + K
Sbjct: 487 RKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIK 538
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 132/265 (49%), Gaps = 10/265 (3%)
Query: 39 HIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRF 98
HI +F D N ++ K G + ARKVF+KMP RD VTW TLI GY ++ R
Sbjct: 85 HILQSIFRH--DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRP 142
Query: 99 LDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAAL 158
D L F ML P+ FT +SV+ A C +HG ++ N + +AL
Sbjct: 143 CDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSAL 202
Query: 159 VDMYAKCGRIDVSKQVFDTV-ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPD 217
+D+Y + G +D ++ VFD + +R+ VS WNA+I G A A+ +F M + P
Sbjct: 203 LDLYTRYGLMDDAQLVFDALESRNDVS-WNALIAGHARRSGTEKALELFQGMLRDGFRPS 261
Query: 218 SITFVGILKACSHCGLVNEGR--EHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACN 275
++ + ACS G + +G+ + I L+ T++D+ ++G++ +A
Sbjct: 262 HFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA---GNTLLDMYAKSGSIHDARK 318
Query: 276 MIKAMPVEPDVVIWRALLSACRIHG 300
+ + + DVV W +LL+A HG
Sbjct: 319 IFDRL-AKRDVVSWNSLLTAYAQHG 342
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 113 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 172
+ D + +++ C L + VH +L+ + + ++ L++MYAKCG ++ ++
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 173 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH-- 230
+VF+ + + W +I+G + H DA+ F++M P+ T ++KA +
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 231 ---CGLVNEGREHFNIMQNRFLIQPQLE---HYGT-MVDLLGRAGNLEEACNMIKAMPVE 283
CG G F ++ + H G+ ++DL R G +++A + A+
Sbjct: 176 RGCCGHQLHG----------FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR 225
Query: 284 PDVVIWRALLSACRIHGKKELAEFAI 309
DV W AL++ H ++ E A+
Sbjct: 226 NDVS-WNALIAG---HARRSGTEKAL 247
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/396 (33%), Positives = 227/396 (57%), Gaps = 15/396 (3%)
Query: 14 IVHGYATYPSL------VAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAG 65
++HGY L ++A+I Y + + +F++ +M+ N I L + G
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 66 ECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 121
D A ++F+ + +VV+W ++I G +N + ++ L LFR M A V+P+ T
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 122 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 181
S++ C + AL + + HG + + N + +AL+DMYAKCGRI++S+ VF+ +
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 182 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 241
++ WN+++NG ++HG A + +++F + + PD I+F +L AC GL +EG ++F
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 242 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
+M + I+P+LEHY MV+LLGRAG L+EA ++IK MP EPD +W ALL++CR+
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNN 572
Query: 302 KELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIE 358
+LAE A + LE G +VLLSN+Y + W + +RN M+ G++K G SWI+
Sbjct: 573 VDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQ 632
Query: 359 LGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
+ + ++ A D+SH ++ I ++ + + + G
Sbjct: 633 VKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSG 668
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 163/402 (40%), Gaps = 83/402 (20%)
Query: 4 TTAAKTHAKLIVHGYA----TYPSL--VAALISTYARCHQPHIAHHVFSRVMDTFSKNLV 57
T + +++ HG P+L V A +S + Q H V MD F + +
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 58 IESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE--- 114
M+ G ARKVFD+M +DVVT + L+ Y + + +R+ M S+ +E
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 115 --------------------------------PDGFTFASVVTGCARLGALCNAKWVHGL 142
PD T +SV+ L + +HG
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 143 MLEKRVKLNYILSAALVDMYAKCGR-------------------------------IDVS 171
++++ + + + +A++DMY K G +D +
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 172 KQVFDTVARD----HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
++F+ +V W ++I G A +G ++A+ +F M+V V P+ +T +L A
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397
Query: 228 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGT-MVDLLGRAGNLEEACNMIKAMPVEPDV 286
C + + GR L+ H G+ ++D+ + G + + + MP + ++
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNV--HVGSALIDMYAKCGRINLSQIVFNMMPTK-NL 454
Query: 287 VIWRALLSACRIHGKKE--LAEFAIANISRLESGDFVLLSNM 326
V W +L++ +HGK + ++ F +RL+ DF+ +++
Sbjct: 455 VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP-DFISFTSL 495
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/300 (18%), Positives = 114/300 (38%), Gaps = 68/300 (22%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
A V +P + ++++LI K F + +F M S + PD ++ CA
Sbjct: 69 ADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAE 128
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV---- 185
L A K +H + + ++ + ++ MY +CGR+ +++VFD ++ V
Sbjct: 129 LSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSAL 188
Query: 186 -------------------------------WNAMINGLAVHGLALDAIAVFSRMEVENV 214
WN +++G G +A+ +F ++
Sbjct: 189 LCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGF 248
Query: 215 LPDSITFVGILKACSHCGLVNEGRE------HFNIMQNRFLIQPQLEHYG---------- 258
PD +T +L + ++N GR +++++ +I ++ YG
Sbjct: 249 CPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIIS 308
Query: 259 --------------TMVDLLGRAGNLEEACNM---IKAMPVEPDVVIWRALLSACRIHGK 301
+ L R G +++A M K +E +VV W ++++ C +GK
Sbjct: 309 LFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGK 368
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/345 (39%), Positives = 199/345 (57%), Gaps = 11/345 (3%)
Query: 57 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 116
+I + + D AR VFD++ VV +N +I GY + R + L LFR M ++P+
Sbjct: 170 LINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPN 229
Query: 117 GFTFASVVTGCARLGALCNAKWVHGLMLE----KRVKLNYILSAALVDMYAKCGRIDVSK 172
T SV++ CA LG+L KW+H + K VK+N AL+DM+AKCG +D +
Sbjct: 230 EITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN----TALIDMFAKCGSLDDAV 285
Query: 173 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 232
+F+ + W+AMI A HG A ++ +F RM ENV PD ITF+G+L ACSH G
Sbjct: 286 SIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTG 345
Query: 233 LVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 292
V EGR++F+ M ++F I P ++HYG+MVDLL RAGNLE+A I +P+ P ++WR L
Sbjct: 346 RVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRIL 405
Query: 293 LSACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVR 349
L+AC H +LAE I L+ GD+V+LSN+Y K W + +R +MK
Sbjct: 406 LAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAV 465
Query: 350 KKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
K G S IE+ + +H+F + D + +HR L+ +++ K G
Sbjct: 466 KVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSG 510
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 124/235 (52%), Gaps = 4/235 (1%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
AR +F+ M D+V +N++ GY + L+ LF +L + PD +TF S++ CA
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 189
AL + +H L ++ + N + L++MY +C +D ++ VFD + V +NAM
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 190 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR-EHFNIMQNRF 248
I G A +A+++F M+ + + P+ IT + +L +C+ G ++ G+ H ++ F
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 249 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 303
++ ++D+ + G+L++A ++ + M + D W A++ A HGK E
Sbjct: 262 CKYVKVN--TALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAYANHGKAE 313
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 139/390 (35%), Positives = 209/390 (53%), Gaps = 34/390 (8%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDI 69
HA L GY+++ ++ L+ YAR G D
Sbjct: 205 HAHLTRRGYSSHVYIMTTLVDMYAR-----------------------------FGCVDY 235
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML--SAEVEPDGFTFASVVTGC 127
A VF MPVR+VV+W+ +I Y KN + + LR FR M+ + + P+ T SV+ C
Sbjct: 236 ASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQAC 295
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 187
A L AL K +HG +L + + + +ALV MY +CG+++V ++VFD + V WN
Sbjct: 296 ASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWN 355
Query: 188 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 247
++I+ VHG AI +F M P +TFV +L ACSH GLV EG+ F M
Sbjct: 356 SLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRD 415
Query: 248 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEF 307
I+PQ+EHY MVDLLGRA L+EA M++ M EP +W +LL +CRIHG ELAE
Sbjct: 416 HGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAER 475
Query: 308 AIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIH 364
A + LE +G++VLL+++Y + W +RV+ +++ G++K G+ W+E+ ++
Sbjct: 476 ASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMY 535
Query: 365 QFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
F + D+ + M+ IH L L + K G
Sbjct: 536 SFVSVDEFNPLMEQIHAFLVKLAEDMKEKG 565
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 119/259 (45%), Gaps = 12/259 (4%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D F +I G D ARKVFDK R + WN L + L L+ M
Sbjct: 111 DPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMN 170
Query: 110 SAEVEPDGFTFASVVTGCA----RLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
VE D FT+ V+ C + L K +H + + + + LVDMYA+
Sbjct: 171 RIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARF 230
Query: 166 GRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM--EVENVLPDSITFVG 223
G +D + VF + +V W+AMI A +G A +A+ F M E ++ P+S+T V
Sbjct: 231 GCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVS 290
Query: 224 ILKACSHCGLVNEGREHFNIMQNRFL--IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP 281
+L+AC+ + +G+ + R L I P + +V + GR G LE + M
Sbjct: 291 VLQACASLAALEQGKLIHGYILRRGLDSILPVI---SALVTMYGRCGKLEVGQRVFDRMH 347
Query: 282 VEPDVVIWRALLSACRIHG 300
+ DVV W +L+S+ +HG
Sbjct: 348 -DRDVVSWNSLISSYGVHG 365
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 124/275 (45%), Gaps = 25/275 (9%)
Query: 36 HQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRD----VVTWNTLIGG 91
H P + + V N + S +K C +A + + ++ N LI
Sbjct: 5 HPPQVIQPTYHTV------NFLPRSPLKPPSCSVA---LNNPSISSGAGAKISNNQLIQS 55
Query: 92 YVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLN 151
K + +R+ LS E P T+ ++ C +L +A VH +L+ +
Sbjct: 56 LCKEGKLKQAIRV----LSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQD 111
Query: 152 YILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEV 211
L+ L+ MY+ G +D +++VFD + + VWNA+ L + G + + ++ +M
Sbjct: 112 PFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNR 171
Query: 212 ENVLPDSITFVGILKAC--SHCGL--VNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGR 266
V D T+ +LKAC S C + + +G+E H ++ + + + T+VD+ R
Sbjct: 172 IGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGY--SSHVYIMTTLVDMYAR 229
Query: 267 AGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
G ++ A + MPV +VV W A+++ +GK
Sbjct: 230 FGCVDYASYVFGGMPVR-NVVSWSAMIACYAKNGK 263
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 147/400 (36%), Positives = 228/400 (57%), Gaps = 40/400 (10%)
Query: 26 AALISTYARCHQ-----------PHIAHHV-FSRVMDTF-----------------SKNL 56
ALIS Y RC + PH+ V ++ +MD F K +
Sbjct: 148 TALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTV 207
Query: 57 VIESLMKAGECDI-----ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM-LS 110
+ + M G C+I ARK+FD MP R++V+WNT+IGGY +N + +G+RLF+ M +
Sbjct: 208 ITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQAT 267
Query: 111 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 170
++PD T SV+ + GAL +W H + K++ + A++DMY+KCG I+
Sbjct: 268 TSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEK 327
Query: 171 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 230
+K++FD + V+ WNAMI+G A++G A A+ +F M +E PD IT + ++ AC+H
Sbjct: 328 AKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEK-PDEITMLAVITACNH 386
Query: 231 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 290
GLV EGR+ F++M+ L ++EHYG MVDLLGRAG+L+EA ++I MP EP+ +I
Sbjct: 387 GGLVEEGRKWFHVMREMGL-NAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILS 445
Query: 291 ALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGG 347
+ LSAC + E AE + LE G++VLL N+Y + K W + V+N+M+
Sbjct: 446 SFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQ 505
Query: 348 VRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLI 387
+K+ G S IE+ + +F + D +H ++IH VL L+
Sbjct: 506 AKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLL 545
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 10/262 (3%)
Query: 45 FSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRL 104
F D + V++ K G+ AR FD+MP R V+W LI GY++ +L
Sbjct: 107 FGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKL 166
Query: 105 FRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK 164
F M + D + +++ G + G + +A+ + M K V I ++ Y
Sbjct: 167 FDQMPHVK---DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTV----ITWTTMIHGYCN 219
Query: 165 CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL-PDSITFVG 223
ID ++++FD + ++ WN MI G + + I +F M+ L PD +T +
Sbjct: 220 IKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILS 279
Query: 224 ILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE 283
+L A S G ++ G E + R + +++ ++D+ + G +E+A + MP E
Sbjct: 280 VLPAISDTGALSLG-EWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMP-E 337
Query: 284 PDVVIWRALLSACRIHGKKELA 305
V W A++ ++G A
Sbjct: 338 KQVASWNAMIHGYALNGNARAA 359
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 116/254 (45%), Gaps = 15/254 (5%)
Query: 43 HVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVR-DVVTWNTLIGGYVKNVRFLDG 101
H + F+K LVI + A ARK+FD+ P R D N++I Y++ ++ D
Sbjct: 4 HAIETNVQIFTKFLVISA--SAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDS 61
Query: 102 LRLFRGMLSAE-VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVD 160
L+R + PD FTF ++ C+ + +H + + +S +VD
Sbjct: 62 FALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVD 121
Query: 161 MYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRME-VENVLPDSI 219
MYAK G++ ++ FD + W A+I+G G A +F +M V++V+ +
Sbjct: 122 MYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNA 181
Query: 220 TFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKA 279
G +K+ G + R F+ M ++ +I + TM+ +++ A + A
Sbjct: 182 MMDGFVKS----GDMTSARRLFDEMTHKTVIT-----WTTMIHGYCNIKDIDAARKLFDA 232
Query: 280 MPVEPDVVIWRALL 293
MP E ++V W ++
Sbjct: 233 MP-ERNLVSWNTMI 245
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 251 bits (642), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 136/322 (42%), Positives = 194/322 (60%), Gaps = 6/322 (1%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM- 108
D + +I+ K G A+ +FD+MP RDVV +N+++ GYV+N ++ L +F M
Sbjct: 282 DVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDME 341
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
+ + PD T V+ A+LG L A +H ++EK+ L L AL+DMY+KCG I
Sbjct: 342 KESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSI 401
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
+ VF+ + + WNAMI GLA+HGL A + ++E ++ PD ITFVG+L AC
Sbjct: 402 QHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNAC 461
Query: 229 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 288
SH GLV EG F +M+ + I+P+L+HYG MVD+L R+G++E A N+I+ MPVEP+ VI
Sbjct: 462 SHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVI 521
Query: 289 WRALLSACRIHGKKELAEFAIANISRLESG----DFVLLSNMYCSLKNWHNAERVRNMMK 344
WR L+AC H + E E +A L++G +VLLSNMY S W + RVR MMK
Sbjct: 522 WRTFLTACSHHKEFETGEL-VAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMK 580
Query: 345 IGGVRKKRGKSWIELGDSIHQF 366
+ K G SWIEL +H+F
Sbjct: 581 ERKIEKIPGCSWIELDGRVHEF 602
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 145/300 (48%), Gaps = 43/300 (14%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D F +N +I +K G ++R++FD+MP RD V++N++I GYVK + LF ++
Sbjct: 155 DLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELF-DLM 213
Query: 110 SAEVEPDGFTFASVVTGCARLGALCN-AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
E++ + ++ S+++G A+ + A + M EK + I +++D Y K GRI
Sbjct: 214 PMEMK-NLISWNSMISGYAQTSDGVDIASKLFADMPEK----DLISWNSMIDGYVKHGRI 268
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLA----------------------------- 199
+ +K +FD + R V W MI+G A G
Sbjct: 269 EDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNK 328
Query: 200 --LDAIAVFSRMEVEN-VLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLE 255
++A+ +FS ME E+ +LPD T V +L A + G +++ + H I++ +F + +L
Sbjct: 329 YHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLG 388
Query: 256 HYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRL 315
++D+ + G+++ A + + + + W A++ IHG E A + I RL
Sbjct: 389 --VALIDMYSKCGSIQHAMLVFEGIE-NKSIDHWNAMIGGLAIHGLGESAFDMLLQIERL 445
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 128/304 (42%), Gaps = 47/304 (15%)
Query: 3 STTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLM 62
S + H +LI G +L ++ +A +P++A
Sbjct: 25 SDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLA--------------------- 63
Query: 63 KAGECDIARKVFDKM--------PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
D AR VF + V D WN +I + L L ML V
Sbjct: 64 -----DFARCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVS 118
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
D F+ + V+ C+RLG + +HG + + + + L L+ +Y KCG + +S+Q+
Sbjct: 119 VDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQM 178
Query: 175 FDTVA-RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 233
FD + RD VS +N+MI+G GL + A +F M +E + + I++ ++ +
Sbjct: 179 FDRMPKRDSVS-YNSMIDGYVKCGLIVSARELFDLMPME--MKNLISWNSMISGYA---- 231
Query: 234 VNEGREHFNIMQNRFLIQPQ--LEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 291
+ + +I F P+ L + +M+D + G +E+A + MP DVV W
Sbjct: 232 --QTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMP-RRDVVTWAT 288
Query: 292 LLSA 295
++
Sbjct: 289 MIDG 292
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 251 bits (642), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 137/396 (34%), Positives = 215/396 (54%), Gaps = 33/396 (8%)
Query: 2 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESL 61
D HA ++ G P L+ +L + YA+C
Sbjct: 237 DLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC-------------------------- 270
Query: 62 MKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 121
G+ A+ +FDKM +++ WN +I GY KN + + +F M++ +V PD +
Sbjct: 271 ---GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 122 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 181
S ++ CA++G+L A+ ++ + + + +S+AL+DM+AKCG ++ ++ VFD
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 182 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 241
V VW+AMI G +HG A +AI+++ ME V P+ +TF+G+L AC+H G+V EG F
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 242 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
N M + I PQ +HY ++DLLGRAG+L++A +IK MPV+P V +W ALLSAC+ H
Sbjct: 448 NRMADH-KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRH 506
Query: 302 KELAEFA---IANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIE 358
EL E+A + +I +G +V LSN+Y + + W VR MK G+ K G SW+E
Sbjct: 507 VELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Query: 359 LGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
+ + F D+SH + I R +E + R K G
Sbjct: 567 VRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGG 602
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 141/271 (52%), Gaps = 7/271 (2%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPV--RDVVTWNTLIGGYVKNVRFLDGLRLFRG 107
D F +N +I K AR VF+ +P+ R +V+W ++ Y +N ++ L +F
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ 212
Query: 108 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 167
M +V+PD SV+ L L + +H +++ +++ L +L MYAKCG+
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272
Query: 168 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
+ +K +FD + ++ +WNAMI+G A +G A +AI +F M ++V PD+I+ + A
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISA 332
Query: 228 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 287
C+ G + + R + + R + + ++D+ + G++E A ++ ++ DVV
Sbjct: 333 CAQVGSLEQARSMYEYV-GRSDYRDDVFISSALIDMFAKCGSVEGA-RLVFDRTLDRDVV 390
Query: 288 IWRALLSACRIHGKKELAEFAIANISRLESG 318
+W A++ +HG+ A AI+ +E G
Sbjct: 391 VWSAMIVGYGLHGR---AREAISLYRAMERG 418
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 164/347 (47%), Gaps = 8/347 (2%)
Query: 15 VHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVF 74
+H + Y SL+ + + A+ Q H V F +I + G+ AR+VF
Sbjct: 18 IHSDSFYASLIDS-ATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVF 76
Query: 75 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 134
D +P + WN +I GY +N F D L ++ M A V PD FTF ++ C+ L L
Sbjct: 77 DDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQ 136
Query: 135 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV--WNAMING 192
++VH + + + L+ +YAKC R+ ++ VF+ + ++ W A+++
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
Query: 193 LAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQ 251
A +G ++A+ +FS+M +V PD + V +L A + + +GR H ++++ I+
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256
Query: 252 PQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG-KKELAEFAIA 310
P L ++ + + G + A + M P++++W A++S +G +E +
Sbjct: 257 PDL--LISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMISGYAKNGYAREAIDMFHE 313
Query: 311 NISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWI 357
I++ D + +++ + + E+ R+M + G R +I
Sbjct: 314 MINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 251 bits (642), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 206/373 (55%), Gaps = 6/373 (1%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAG 65
+ H +++V G+ + L ++I YA+C Q A F V D +I K G
Sbjct: 200 QAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLG 259
Query: 66 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 125
+ + A K+F +MP ++ V+W LI GYV+ L LFR M++ V+P+ FTF+S +
Sbjct: 260 DMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLC 319
Query: 126 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 185
A + +L + K +HG M+ V+ N I+ ++L+DMY+K G ++ S++VF H V
Sbjct: 320 ASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCV 379
Query: 186 -WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIM 244
WN MI+ LA HGL A+ + M V P+ T V IL ACSH GLV EG F M
Sbjct: 380 FWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESM 439
Query: 245 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKEL 304
+ I P EHY ++DLLGRAG +E I+ MP EPD IW A+L CRIHG +EL
Sbjct: 440 TVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEEL 499
Query: 305 AEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGD 361
+ A + +L+ S ++LLS++Y W E++R +MK V K++ SWIE+
Sbjct: 500 GKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEK 559
Query: 362 SIHQFNAADQSHA 374
+ F +D SHA
Sbjct: 560 KVEAFTVSDGSHA 572
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 153/325 (47%), Gaps = 35/325 (10%)
Query: 10 HAKLIVHGYATYPSLVAA-LISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAGE 66
H L + G+ +L++ LI Y +C +P A VF + + + +S N ++ +K+G
Sbjct: 69 HRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGM 128
Query: 67 CDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTG 126
AR VFD MP RDVV+WNT++ GY ++ + L ++ + ++ + F+FA ++T
Sbjct: 129 LVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTA 188
Query: 127 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 186
C + L + HG +L N +LS +++D YAKCG+++ +K+ FD + + +W
Sbjct: 189 CVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIW 248
Query: 187 NAMINGLAV-------------------------------HGLALDAIAVFSRMEVENVL 215
+I+G A G A+ +F +M V
Sbjct: 249 TTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVK 308
Query: 216 PDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACN 275
P+ TF L A + + G+E M R ++P +++D+ ++G+LE +
Sbjct: 309 PEQFTFSSCLCASASIASLRHGKEIHGYMI-RTNVRPNAIVISSLIDMYSKSGSLEASER 367
Query: 276 MIKAMPVEPDVVIWRALLSACRIHG 300
+ + + D V W ++SA HG
Sbjct: 368 VFRICDDKHDCVFWNTMISALAQHG 392
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 90/220 (40%), Gaps = 36/220 (16%)
Query: 120 FASVVTGCARLGALCNAKWVHG-LMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV 178
AS++ C +L KW+H L + + N +LS L+ MY KCG+ + +VFD +
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 179 ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLP---------------------- 216
++ WN M++G G+ + A VF M +V+
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 217 ---------DSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGR 266
+ +F G+L AC + R+ H ++ FL L +++D +
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLS--CSIIDAYAK 226
Query: 267 AGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAE 306
G +E A M V+ D+ IW L+S G E AE
Sbjct: 227 CGQMESAKRCFDEMTVK-DIHIWTTLISGYAKLGDMEAAE 265
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 198/333 (59%), Gaps = 3/333 (0%)
Query: 65 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVV 124
G +IA KVFD+MPVRD+V+WN +I + L +++ M + V D +T +++
Sbjct: 156 GSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALL 215
Query: 125 TGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS 184
+ CA + AL +H + + R + +S AL+DMYAKCG ++ + VF+ + + V
Sbjct: 216 SSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVL 275
Query: 185 VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIM 244
WN+MI G VHG ++AI+ F +M V P++ITF+G+L CSH GLV EG EHF IM
Sbjct: 276 TWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIM 335
Query: 245 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKEL 304
++F + P ++HYG MVDL GRAG LE + MI A D V+WR LL +C+IH EL
Sbjct: 336 SSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLEL 395
Query: 305 AEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGD 361
E A+ + +LE +GD+VL++++Y + + +R +++ ++ G SWIE+GD
Sbjct: 396 GEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGD 455
Query: 362 SIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
+H+F D+ H E I+ L +I RA G
Sbjct: 456 QVHKFVVDDKMHPESAVIYSELGEVINRAILAG 488
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 116/233 (49%), Gaps = 15/233 (6%)
Query: 74 FDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLF-RGMLSAEVEPDGFTFASVVTGCARLGA 132
FD P WN LI G+ + L+ + + R +LS+ PD FTF + C R+ +
Sbjct: 65 FDSDP--STSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKS 122
Query: 133 LCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNAMIN 191
+ +HG ++ + I++ +LV Y+ G ++++ +VFD + RD VS WN MI
Sbjct: 123 IPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVS-WNVMIC 181
Query: 192 GLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQ 251
+ GL A++++ RM E V DS T V +L +C+H +N G +M +R
Sbjct: 182 CFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMG-----VMLHRIACD 236
Query: 252 PQLEH----YGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
+ E ++D+ + G+LE A + M + DV+ W +++ +HG
Sbjct: 237 IRCESCVFVSNALIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMIIGYGVHG 288
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 52 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 111
F N +I+ K G + A VF+ M RDV+TWN++I GY + ++ + FR M+++
Sbjct: 244 FVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVAS 303
Query: 112 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKL--NYILSAALVDMYAKCGRID 169
V P+ TF ++ GC+ G L H ++ + L N +VD+Y + G+++
Sbjct: 304 GVRPNAITFLGLLLGCSHQG-LVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLE 362
Query: 170 VS-KQVFDTVARDHVSVWNAMINGLAVH-GLALDAIAVFSRMEVE 212
S + ++ + + +W ++ +H L L +A+ +++E
Sbjct: 363 NSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLE 407
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/426 (31%), Positives = 231/426 (54%), Gaps = 41/426 (9%)
Query: 5 TAAKTHAKLIVHGYATYPSLVAALISTYARC-------------HQPHI----------- 40
T + H + + HG ++ + LI Y C HQP++
Sbjct: 124 TGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACF 183
Query: 41 -------AHHVFSRVM--DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGG 91
A +F +++ + S N+++ +KAGE + A+++F +MP RD V+W+T+I G
Sbjct: 184 RGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVG 243
Query: 92 YVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLN 151
N F + FR + A + P+ + V++ C++ G+ K +HG + ++ +
Sbjct: 244 IAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFV--EKAGYS 301
Query: 152 YILSA--ALVDMYAKCGRIDVSKQVFDTVARDHVSV-WNAMINGLAVHGLALDAIAVFSR 208
+I+S AL+DMY++CG + +++ VF+ + V W +MI GLA+HG +A+ +F+
Sbjct: 302 WIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNE 361
Query: 209 MEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAG 268
M V PD I+F+ +L ACSH GL+ EG ++F+ M+ + I+P++EHYG MVDL GR+G
Sbjct: 362 MTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSG 421
Query: 269 NLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSN 325
L++A + I MP+ P ++WR LL AC HG ELAE ++ L+ SGD VLLSN
Sbjct: 422 KLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSN 481
Query: 326 MYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEG 385
Y + W + +R M + ++K S +E+G ++++F A ++ H L+
Sbjct: 482 AYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKE 541
Query: 386 LIQRAK 391
+I R K
Sbjct: 542 IILRLK 547
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 108/241 (44%), Gaps = 13/241 (5%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML-SAEVEPDGFTFASVVTGCA 128
AR++ P D +NTL+ GY ++ + + +F M+ V PD F+FA V+
Sbjct: 58 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVE 117
Query: 129 RLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNA 188
+L +H L+ ++ + + L+ MY CG ++ +++VFD + + ++ WNA
Sbjct: 118 NFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA 177
Query: 189 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 248
+I A +F +M V N ++ G +KA G + + F+ M +R
Sbjct: 178 VITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKA----GELESAKRIFSEMPHRD 233
Query: 249 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSACRIHGKKELA 305
+ + TM+ + G+ E+ + + + P+ V +LSAC G E
Sbjct: 234 DVS-----WSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG 288
Query: 306 E 306
+
Sbjct: 289 K 289
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/340 (36%), Positives = 193/340 (56%), Gaps = 3/340 (0%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N VI +K+ + A++ F+ + +++V++NT + G +N+ F +L + E+
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELG 471
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
FTFAS+++G A +G++ + +H +++ + N + AL+ MY+KCG ID + +V
Sbjct: 472 VSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRV 531
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
F+ + +V W +MI G A HG A+ + F++M E V P+ +T+V IL ACSH GLV
Sbjct: 532 FNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLV 591
Query: 235 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 294
+EG HFN M I+P++EHY MVDLL RAG L +A I MP + DV++WR L
Sbjct: 592 SEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLG 651
Query: 295 ACRIHGKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKK 351
ACR+H EL + A I L E ++ LSN+Y W + +R MK + K+
Sbjct: 652 ACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKE 711
Query: 352 RGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 391
G SWIE+GD IH+F D +H I+ L+ LI K
Sbjct: 712 GGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIK 751
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
A KVFDKM +VVTW +I ++ + +R F M+ + E D FT +SV + CA
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC---GRIDVSKQVFDTVARDHVSVW 186
L L K +H + R L + +LVDMYAKC G +D ++VFD + V W
Sbjct: 282 LENLSLGKQLHSWAI--RSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 187 NAMINGLAVH-GLALDAIAVFSRMEVE-NVLPDSITFVGILKACSH 230
A+I G + LA +AI +FS M + +V P+ TF KAC +
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 119/272 (43%), Gaps = 45/272 (16%)
Query: 65 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRF-LDGLRLFRGMLS-AEVEPDGFTFAS 122
G D RKVFD+M V++W LI GY+KN + + LF M++ VEP+ FTF+S
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 182
C L K V G ++ + N ++ +++ M+ K R++ +++ F++++ +
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN 438
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK---------------- 226
+ +N ++G + A + S + + + TF +L
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHS 498
Query: 227 -------AC------------SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRA 267
+C S CG ++ FN M+NR +I + +M+ +
Sbjct: 499 QVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVIS-----WTSMITGFAKH 553
Query: 268 G---NLEEACNMIKAMPVEPDVVIWRALLSAC 296
G + E N + V+P+ V + A+LSAC
Sbjct: 554 GFAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 9/216 (4%)
Query: 116 DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF 175
D TF+S++ C R K VH ++E ++ + +L +L+ +Y+K G ++ VF
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 176 DTV----ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 231
+T+ RD VS W+AM+ +G LDAI VF ++P+ + +++ACS+
Sbjct: 121 ETMRRFGKRDVVS-WSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179
Query: 232 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGN-LEEACNMIKAMPVEPDVVIWR 290
V GR + + + +++D+ + N E A + M E +VV W
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS-ELNVVTWT 238
Query: 291 ALLSACRIHG--KKELAEFAIANISRLESGDFVLLS 324
+++ C G ++ + F +S ES F L S
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 90/195 (46%), Gaps = 5/195 (2%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKM---PVRDVVTWNTLIGGYVKNVRFLDGLRLFR 106
D+ N +I K+G+ A VF+ M RDVV+W+ ++ Y N R LD +++F
Sbjct: 96 DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155
Query: 107 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEK-RVKLNYILSAALVDMYAKC 165
L + P+ + + +V+ C+ + + G +++ + + + +L+DM+ K
Sbjct: 156 EFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKG 215
Query: 166 -GRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGI 224
+ + +VFD ++ +V W MI G +AI F M + D T +
Sbjct: 216 ENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV 275
Query: 225 LKACSHCGLVNEGRE 239
AC+ ++ G++
Sbjct: 276 FSACAELENLSLGKQ 290
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 249 bits (635), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 133/354 (37%), Positives = 206/354 (58%), Gaps = 13/354 (3%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
+D N++++ M++G D ARKVFD M R+VVTWN+LI K VR + LFR M
Sbjct: 269 VDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKM 328
Query: 109 LSAEVEPDGFTFASVVT---GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
+ E GF++A++ T C+R+ AL K +H +L+ + K + L +L+DMY KC
Sbjct: 329 ---QEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKC 385
Query: 166 GRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL 225
G ++ S++VFD + ++ WN M+N A++G + I +F M V PD ITFV +L
Sbjct: 386 GEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALL 445
Query: 226 KACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 285
CS GL G F M+ F + P LEHY +VD+LGRAG ++EA +I+ MP +P
Sbjct: 446 SGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPS 505
Query: 286 VVIWRALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNM 342
IW +LL++CR+HG + E A + LE G++V++SN+Y K W N +++R M
Sbjct: 506 ASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREM 565
Query: 343 MKIGGVRKKRGKSWIELGDSIHQFNAAD----QSHAEMKAIHRVLEGLIQRAKF 392
MK GV+K+ G SW+++ D I F A ++ E K + L+ I+++ +
Sbjct: 566 MKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGY 619
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 124/240 (51%), Gaps = 7/240 (2%)
Query: 68 DIARKVFDKMPVRDVVT---WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVV 124
D+ARK+FD + ++T W + GY +N D L ++ ML + +EP F+ + +
Sbjct: 184 DLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVAL 243
Query: 125 TGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS 184
C L L + +H +++++ K++ ++ L+ +Y + G D +++VFD ++ +V
Sbjct: 244 KACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVV 303
Query: 185 VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNI 243
WN++I+ L+ + +F +M+ E + T IL ACS + G+E H I
Sbjct: 304 TWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQI 363
Query: 244 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 303
++++ +P + +++D+ G+ G +E + + M + D+ W +L+ I+G E
Sbjct: 364 LKSKE--KPDVPLLNSLMDMYGKCGEVEYSRRVFDVM-LTKDLASWNIMLNCYAINGNIE 420
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 248 bits (632), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 205/359 (57%), Gaps = 16/359 (4%)
Query: 52 FSKNLVIESLMKAGECDI---------ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGL 102
FS + +SL+ D+ A KVFD++P RD V+WN L Y++N R D L
Sbjct: 140 FSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVL 199
Query: 103 RLFRGM---LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALV 159
LF M + V+PDG T + CA LGAL K VH + E + LS LV
Sbjct: 200 VLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLV 259
Query: 160 DMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSI 219
MY++CG +D + QVF + +V W A+I+GLA++G +AI F+ M + P+
Sbjct: 260 SMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQ 319
Query: 220 TFVGILKACSHCGLVNEGREHFNIMQN-RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIK 278
T G+L ACSH GLV EG F+ M++ F I+P L HYG +VDLLGRA L++A ++IK
Sbjct: 320 TLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIK 379
Query: 279 AMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHN 335
+M ++PD IWR LL ACR+HG EL E I+++ L E+GD+VLL N Y ++ W
Sbjct: 380 SMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEK 439
Query: 336 AERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
+R++MK + K G S IEL ++H+F D SH + I+++L + Q+ K G
Sbjct: 440 VTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAG 498
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 10/221 (4%)
Query: 86 NTLIGGYVKNVRFLDGLRLFRGML---SAEVEPDGFTFASVVTGCARLGALCNAKWVHGL 142
NT+I + + +G RLFR + S P +FA + C + G L +HG
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFA--LKCCIKSGDLLGGLQIHGK 138
Query: 143 MLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDA 202
+ + +L L+D+Y+ C + +VFD + + WN + + + D
Sbjct: 139 IFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDV 198
Query: 203 IAVFSRMEVE---NVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGT 259
+ +F +M+ + V PD +T + L+AC++ G ++ G++ + + L L T
Sbjct: 199 LVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGL-SGALNLSNT 257
Query: 260 MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
+V + R G++++A + M E +VV W AL+S ++G
Sbjct: 258 LVSMYSRCGSMDKAYQVFYGMR-ERNVVSWTALISGLAMNG 297
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 248 bits (632), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 218/409 (53%), Gaps = 49/409 (11%)
Query: 20 TYPSLV-----AALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVF 74
TYPS++ A L+ + H + FS D N ++ K G+ D AR +F
Sbjct: 288 TYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD----NSLVSLYYKCGKFDEARAIF 343
Query: 75 DKMPVRDVVTWNTLIGGYV-----------------KNVRFL--------------DGLR 103
+KMP +D+V+WN L+ GYV KN+ +GL+
Sbjct: 344 EKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLK 403
Query: 104 LFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSA--ALVDM 161
LF M EP + F+ + CA LGA CN + H +L ++ + LSA AL+ M
Sbjct: 404 LFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL--KIGFDSSLSAGNALITM 461
Query: 162 YAKCGRIDVSKQVFDTVA-RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSIT 220
YAKCG ++ ++QVF T+ D VS WNA+I L HG +A+ V+ M + + PD IT
Sbjct: 462 YAKCGVVEEARQVFRTMPCLDSVS-WNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRIT 520
Query: 221 FVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 280
+ +L ACSH GLV++GR++F+ M+ + I P +HY ++DLL R+G +A ++I+++
Sbjct: 521 LLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESL 580
Query: 281 PVEPDVVIWRALLSACRIHGKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAE 337
P +P IW ALLS CR+HG EL A + L G ++LLSNM+ + W
Sbjct: 581 PFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVA 640
Query: 338 RVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGL 386
RVR +M+ GV+K+ SWIE+ +H F D SH E +A++ L+ L
Sbjct: 641 RVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDL 689
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 152/338 (44%), Gaps = 43/338 (12%)
Query: 2 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQP----HIAHHVFSRVM--DTFSKN 55
D + HA + G S+ AL+S Y++C H A VF ++ D S
Sbjct: 164 DEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWT 223
Query: 56 LVIESLMKAGECDIARKVFDKMPVR-DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
++ +K G D+ ++ + M +V +N +I GYV + + L + R M+S+ +E
Sbjct: 224 TMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIE 283
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
D FT+ SV+ CA G L K VH +L +R ++ +LV +Y KCG+ D ++ +
Sbjct: 284 LDEFTYPSVIRACATAGLLQLGKQVHAYVL-RREDFSFHFDNSLVSLYYKCGKFDEARAI 342
Query: 175 FDTVARDHVSVWNA-------------------------------MINGLAVHGLALDAI 203
F+ + + WNA MI+GLA +G + +
Sbjct: 343 FEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGL 402
Query: 204 AVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVD 262
+FS M+ E P F G +K+C+ G G++ H +++ F L ++
Sbjct: 403 KLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGF--DSSLSAGNALIT 460
Query: 263 LLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
+ + G +EEA + + MP D V W AL++A HG
Sbjct: 461 MYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQHG 497
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 142/332 (42%), Gaps = 46/332 (13%)
Query: 6 AAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMK 63
A H +I G+ ++ LI Y + + + A +F + D ++ ++
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 64 AGECDIARKVFDKMPV--RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 121
+G+ +AR VF+K PV RD V +N +I G+ N + LF M +PD FTFA
Sbjct: 93 SGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFA 152
Query: 122 SVVTGCARLGALCNAKWV--HGLMLEKRVKLNYILSAALVDMYAKCGR----IDVSKQVF 175
SV+ G A L A + V H L+ +S ALV +Y+KC + +++VF
Sbjct: 153 SVLAGLA-LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVF 211
Query: 176 DTVARDHVSVW--------------------------------NAMINGLAVHGLALDAI 203
D + W NAMI+G G +A+
Sbjct: 212 DEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEAL 271
Query: 204 AVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDL 263
+ RM + D T+ +++AC+ GL+ G++ + R ++ ++V L
Sbjct: 272 EMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN--SLVSL 329
Query: 264 LGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
+ G +EA + + MP + D+V W ALLS
Sbjct: 330 YYKCGKFDEARAIFEKMPAK-DLVSWNALLSG 360
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 247 bits (631), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 193/345 (55%), Gaps = 8/345 (2%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPV--RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 112
N +I+ K + D AR +FD + RDVVTW +IGGY ++ L L M +
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Query: 113 VE--PDGFTFASVVTGCARLGALCNAKWVHGLMLE-KRVKLNYILSAALVDMYAKCGRID 169
+ P+ FT + + CA L AL K +H L ++ + +S L+DMYAKCG I
Sbjct: 471 CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSIS 530
Query: 170 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
++ VFD + + W +++ G +HG +A+ +F M D +T + +L ACS
Sbjct: 531 DARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACS 590
Query: 230 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 289
H G++++G E+FN M+ F + P EHY +VDLLGRAG L A +I+ MP+EP V+W
Sbjct: 591 HSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVW 650
Query: 290 RALLSACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIG 346
A LS CRIHGK EL E+A I+ L S G + LLSN+Y + W + R+R++M+
Sbjct: 651 VAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHK 710
Query: 347 GVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 391
GV+K+ G SW+E F D++H K I++VL +QR K
Sbjct: 711 GVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIK 755
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 154/298 (51%), Gaps = 24/298 (8%)
Query: 28 LISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAGECDIARKVFDKMPVR----D 81
L+ YA+C A+ VFS V D S N ++ + G + A ++F+KM D
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Query: 82 VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHG 141
VVTW+ I GY + + L + R MLS+ ++P+ T SV++GCA +GAL + K +H
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 142 LMLEKRVKL--------NYILSAALVDMYAKCGRIDVSKQVFDTVA---RDHVSVWNAMI 190
++ + L N +++ L+DMYAKC ++D ++ +FD+++ RD V W MI
Sbjct: 390 YAIKYPIDLRKNGHGDENMVIN-QLIDMYAKCKKVDTARAMFDSLSPKERD-VVTWTVMI 447
Query: 191 NGLAVHGLALDAIAVFSRMEVEN--VLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNR 247
G + HG A A+ + S M E+ P++ T L AC+ + G++ H ++N+
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ 507
Query: 248 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
P L ++D+ + G++ +A + M + +V W +L++ +HG E A
Sbjct: 508 QNAVP-LFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVT-WTSLMTGYGMHGYGEEA 563
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 140/328 (42%), Gaps = 49/328 (14%)
Query: 20 TYPSLVAAL--ISTYARCHQP-HIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDK 76
T+P + A IS+ RC + H V + + F N ++ + ARKVFD+
Sbjct: 129 TFPFVFKACGEISS-VRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDE 187
Query: 77 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA-EVEPDGFTFASVVTGCARLGALCN 135
M V DVV+WN++I Y K + L +F M + PD T +V+ CA LG
Sbjct: 188 MSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSL 247
Query: 136 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAV 195
K +H + + N + LVDMYAKCG +D + VF ++ V WNAM+ G +
Sbjct: 248 GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQ 307
Query: 196 HGLALDAIAVFSRMEVEN-----------------------------------VLPDSIT 220
G DA+ +F +M+ E + P+ +T
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Query: 221 FVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG-------TMVDLLGRAGNLEEA 273
+ +L C+ G + G+E + ++ I + +G ++D+ + ++ A
Sbjct: 368 LISVLSGCASVGALMHGKE-IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTA 426
Query: 274 CNMIKAM-PVEPDVVIWRALLSACRIHG 300
M ++ P E DVV W ++ HG
Sbjct: 427 RAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 136/307 (44%), Gaps = 10/307 (3%)
Query: 6 AAKTHAKLIVHGYATY-PSLVAALISTYARCHQPHIAHH---VFSRVMDTFSKNLVIESL 61
AAK+H + V ++T P + I Q + H F + + +L I +
Sbjct: 11 AAKSHQYIKVSLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFGILTLNLTSHL-ISTY 69
Query: 62 MKAGECDIARKVFDKMPVRD--VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFT 119
+ G A + + P D V WN+LI Y N L LF M S PD +T
Sbjct: 70 ISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYT 129
Query: 120 FASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA 179
F V C + ++ + H L L N + ALV MY++C + +++VFD ++
Sbjct: 130 FPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMS 189
Query: 180 RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKACSHCGLVNEGR 238
V WN++I A G A+ +FSRM E PD+IT V +L C+ G + G+
Sbjct: 190 VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGK 249
Query: 239 EHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRI 298
+ +IQ +VD+ + G ++EA + M V+ DVV W A+++
Sbjct: 250 QLHCFAVTSEMIQNMFVG-NCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAMVAGYSQ 307
Query: 299 HGKKELA 305
G+ E A
Sbjct: 308 IGRFEDA 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 52 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 111
F N +I+ K G AR VFD M ++ VTW +L+ GY + + L +F M
Sbjct: 514 FVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRI 573
Query: 112 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS------AALVDMYAKC 165
+ DG T V+ C+ G + G+ R+K + +S A LVD+ +
Sbjct: 574 GFKLDGVTLLVVLYACSHSGMI-----DQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRA 628
Query: 166 GRIDVSKQVFDTVARDHVS-VWNAMINGLAVHG 197
GR++ + ++ + + + VW A ++ +HG
Sbjct: 629 GRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 247 bits (631), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 132/350 (37%), Positives = 197/350 (56%), Gaps = 4/350 (1%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
D F N +++ K G A VF +M V+D+++WNT+IGGY KN + L LF +
Sbjct: 430 FDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLL 489
Query: 109 LSAE-VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 167
L + PD T A V+ CA L A + +HG ++ + ++ +LVDMYAKCG
Sbjct: 490 LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGA 549
Query: 168 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
+ ++ +FD +A + W MI G +HG +AIA+F++M + D I+FV +L A
Sbjct: 550 LLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYA 609
Query: 228 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 287
CSH GLV+EG FNIM++ I+P +EHY +VD+L R G+L +A I+ MP+ PD
Sbjct: 610 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDAT 669
Query: 288 IWRALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMK 344
IW ALL CRIH +LAE + LE +G +VL++N+Y + W +R+R +
Sbjct: 670 IWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIG 729
Query: 345 IGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
G+RK G SWIE+ ++ F A D S+ E + I L + R +G
Sbjct: 730 QRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEG 779
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 127/240 (52%), Gaps = 4/240 (1%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N ++ +K D ARKVFD+M RDV++WN++I GYV N GL +F ML + +E
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
D T SV GCA + + VH + ++ L+DMY+KCG +D +K V
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
F ++ V + +MI G A GLA +A+ +F ME E + PD T +L C+ L+
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 413
Query: 235 NEG-REHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
+EG R H I +N + + ++D+ + G+++EA + M V+ D++ W ++
Sbjct: 414 DEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTII 470
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 162/321 (50%), Gaps = 21/321 (6%)
Query: 25 VAALISTYARCHQPHI------AHHV-----FSRVMDTFSKNLVIESLMKAGECDIARKV 73
+A ++S +A C + H + FSR D F N +++ K G+ D A+ V
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSR-EDRFC-NTLLDMYSKCGDLDSAKAV 353
Query: 74 FDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGAL 133
F +M R VV++ ++I GY + + ++LF M + PD +T +V+ CAR L
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 413
Query: 134 CNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGL 193
K VH + E + + +S AL+DMYAKCG + ++ VF + + WN +I G
Sbjct: 414 DEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY 473
Query: 194 AVHGLALDAIAVFS-RMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQ 251
+ + A +A+++F+ +E + PD T +L AC+ ++GRE H IM+N +
Sbjct: 474 SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD 533
Query: 252 PQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIH--GKKELAEFAI 309
+ + ++VD+ + G L A +M+ D+V W +++ +H GK+ +A F
Sbjct: 534 RHVAN--SLVDMYAKCGALLLA-HMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQ 590
Query: 310 ANISRLESGDFVLLSNMY-CS 329
+ +E+ + +S +Y CS
Sbjct: 591 MRQAGIEADEISFVSLLYACS 611
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 129/259 (49%), Gaps = 19/259 (7%)
Query: 65 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVV 124
G+ A +VFD++ + + WN L+ K+ F + LF+ M+S+ VE D +TF+ V
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 125 TGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS 184
+ L ++ + +HG +L+ + +LV Y K R+D +++VFD + V
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVI 262
Query: 185 VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI- 243
WN++ING +GLA ++VF +M V + D T V + C+ L++ GR +I
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIG 322
Query: 244 ------MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACR 297
++RF T++D+ + G+L+ A + + M + VV + ++++
Sbjct: 323 VKACFSREDRFC--------NTLLDMYSKCGDLDSAKAVFREMS-DRSVVSYTSMIAG-- 371
Query: 298 IHGKKELAEFAIANISRLE 316
+ ++ LA A+ +E
Sbjct: 372 -YAREGLAGEAVKLFEEME 389
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 12/260 (4%)
Query: 60 SLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFT 119
SL +C + FD R V NT + + ++ + ++L +S + + D T
Sbjct: 43 SLRTVSDCVDSITTFD----RSVTDANTQLRRFCESGNLENAVKLL--CVSGKWDIDPRT 96
Query: 120 FASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA 179
SV+ CA +L + K V + ++ L + L MY CG + + +VFD V
Sbjct: 97 LCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVK 156
Query: 180 RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE 239
+ WN ++N LA G +I +F +M V DS TF + K+ S V+ G +
Sbjct: 157 IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQ 216
Query: 240 -HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRI 298
H I+++ F + + + ++V + ++ A + M E DV+ W ++++
Sbjct: 217 LHGFILKSGFGERNSVGN--SLVAFYLKNQRVDSARKVFDEM-TERDVISWNSIINGYVS 273
Query: 299 HG--KKELAEFAIANISRLE 316
+G +K L+ F +S +E
Sbjct: 274 NGLAEKGLSVFVQMLVSGIE 293
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/381 (35%), Positives = 213/381 (55%), Gaps = 6/381 (1%)
Query: 20 TYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGECDIARKVFDKM 77
TYP L+ A + I VF + D F +N +I + GE +++ VF+K+
Sbjct: 134 TYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKL 193
Query: 78 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS-AEVEPDGFTFASVVTGCARLGALCNA 136
+ +W++++ + + L LFRGM S ++ + S + CA GAL
Sbjct: 194 ESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLG 253
Query: 137 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 196
+HG +L +LN I+ +LVDMY KCG +D + +F + + + ++AMI+GLA+H
Sbjct: 254 MSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALH 313
Query: 197 GLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEH 256
G A+ +FS+M E + PD + +V +L ACSH GLV EGR F M ++P EH
Sbjct: 314 GEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEH 373
Query: 257 YGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE 316
YG +VDLLGRAG LEEA I+++P+E + VIWR LS CR+ EL + A + +L
Sbjct: 374 YGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLS 433
Query: 317 S---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSH 373
S GD++L+SN+Y + W + R R + I G+++ G S +EL H+F + D+SH
Sbjct: 434 SHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSH 493
Query: 374 AEMKAIHRVLEGLIQRAKFDG 394
+ K I+++L + + KF+G
Sbjct: 494 PKCKEIYKMLHQMEWQLKFEG 514
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 117/227 (51%), Gaps = 13/227 (5%)
Query: 85 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 144
+NT+I GYV + F + L + M+ EPD FT+ ++ C RL ++ K +HG +
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 145 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIA 204
+ ++ + + +L++MY +CG +++S VF+ + + W++M++ A G+ + +
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 205 VFSRMEVE-NVLPDSITFVGILKACSHCGLVNEGREHF-----NIMQNRFLIQPQLEHYG 258
+F M E N+ + V L AC++ G +N G NI + ++Q L
Sbjct: 220 LFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSL---- 275
Query: 259 TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
VD+ + G L++A ++ + M ++ + A++S +HG+ E A
Sbjct: 276 --VDMYVKCGCLDKALHIFQKMEKRNNLT-YSAMISGLALHGEGESA 319
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 200/346 (57%), Gaps = 4/346 (1%)
Query: 53 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 112
+ N +I M G + A +F++MPV+D+++W T+I GY +N R+ + + +F M+
Sbjct: 968 TSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 1027
Query: 113 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 172
+ PD T ++V++ CA LG L K VH L+ L+ + +ALVDMY+KCG ++ +
Sbjct: 1028 IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERAL 1087
Query: 173 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 232
VF + + ++ WN++I GLA HG A +A+ +F++ME+E+V P+++TFV + AC+H G
Sbjct: 1088 LVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAG 1147
Query: 233 LVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 292
LV+EGR + M + + I +EHYG MV L +AG + EA +I M EP+ VIW AL
Sbjct: 1148 LVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGAL 1207
Query: 293 LSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVR 349
L CRIH +AE A + LE SG + LL +MY W + +R M+ G+
Sbjct: 1208 LDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIE 1267
Query: 350 KK-RGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
K G S I + H F AAD+SH+ + +L+ + + G
Sbjct: 1268 KICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAG 1313
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 124/316 (39%), Gaps = 79/316 (25%)
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTG- 126
D+A +M +V +N L G+V + L L+ ML V P +T++S+V
Sbjct: 822 DLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKAS 881
Query: 127 --CARLGALCNAK-WVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
+R G A W G +++ L+D Y+ GRI +++VFD +
Sbjct: 882 SFASRFGESLQAHIWKFGFGFHVKIQ------TTLIDFYSATGRIREARKVFDEMPERDD 935
Query: 184 SVW-------------------------------NAMINGLAVHGLALDAIAVFSRMEV- 211
W N +ING G A ++F++M V
Sbjct: 936 IAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVK 995
Query: 212 ------------------------------ENVLPDSITFVGILKACSHCGLVNEGRE-H 240
E ++PD +T ++ AC+H G++ G+E H
Sbjct: 996 DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVH 1055
Query: 241 FNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
+QN F++ + +VD+ + G+LE A + +P + ++ W +++ HG
Sbjct: 1056 MYTLQNGFVLDVYIG--SALVDMYSKCGSLERALLVFFNLP-KKNLFCWNSIIEGLAAHG 1112
Query: 301 KKELAEFAIANISRLE 316
A+ A+ +++E
Sbjct: 1113 ---FAQEALKMFAKME 1125
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 6/183 (3%)
Query: 167 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 226
R+D++ + +V V+NA+ G + ++ ++ RM ++V P S T+ ++K
Sbjct: 820 RLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVK 879
Query: 227 ACSHCGLVNEG-REHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 285
A S E + H F ++ Q T++D G + EA + MP E D
Sbjct: 880 ASSFASRFGESLQAHIWKFGFGFHVKIQT----TLIDFYSATGRIREARKVFDEMP-ERD 934
Query: 286 VVIWRALLSACRIHGKKELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKI 345
+ W ++SA R + A +S L N Y L N AE + N M +
Sbjct: 935 DIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPV 994
Query: 346 GGV 348
+
Sbjct: 995 KDI 997
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/343 (37%), Positives = 196/343 (57%), Gaps = 5/343 (1%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D F ++ +I+ K GE + A VFD+M D + WN++IGG+ +N R L LF+ M
Sbjct: 193 DVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMK 252
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
A + T SV+ C L L H ++ + + IL+ ALVDMY KCG ++
Sbjct: 253 RAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV--KYDQDLILNNALVDMYCKCGSLE 310
Query: 170 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
+ +VF+ + V W+ MI+GLA +G + +A+ +F RM+ P+ IT VG+L ACS
Sbjct: 311 DALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACS 370
Query: 230 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 289
H GL+ +G +F M+ + I P EHYG M+DLLG+AG L++A ++ M EPD V W
Sbjct: 371 HAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTW 430
Query: 290 RALLSACRIHGKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMKIG 346
R LL ACR+ LAE+A + L ++G + LLSN+Y + + W + E +R M+
Sbjct: 431 RTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDR 490
Query: 347 GVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQR 389
G++K+ G SWIE+ IH F D SH ++ + + L LI R
Sbjct: 491 GIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHR 533
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 152/312 (48%), Gaps = 17/312 (5%)
Query: 2 DSTTAAKTHAKLIVHGY----ATYPSLVAALISTYARCHQPHIAHHVF---SRVMDTFSK 54
D A K L HG ATY L+ IS A I H++ R M F
Sbjct: 41 DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM-MFLV 99
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N++I +K + A ++FD+MP R+V++W T+I Y K L L ML V
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
P+ +T++SV+ C + + + +H ++++ ++ + + +AL+D++AK G + + V
Sbjct: 160 PNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
FD + VWN++I G A + + A+ +F RM+ + + T +L+AC+ L+
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276
Query: 235 NEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
G + H +I++ L +VD+ + G+LE+A + M E DV+ W ++
Sbjct: 277 ELGMQAHVHIVK----YDQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMI 331
Query: 294 SACRIHGKKELA 305
S +G + A
Sbjct: 332 SGLAQNGYSQEA 343
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 39/194 (20%)
Query: 37 QPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNV 96
Q H+ H+ D N +++ K G + A +VF++M RDV+TW+T+I G +N
Sbjct: 281 QAHV--HIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338
Query: 97 RFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS- 155
+ L+LF M S+ +P+ T V+ C+ G L + W + ++K ++ +
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG-WYYFRSMKKLYGIDPVREH 397
Query: 156 -AALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENV 214
++D+ K G++D DA+ + + ME E
Sbjct: 398 YGCMIDLLGKAGKLD-------------------------------DAVKLLNEMECE-- 424
Query: 215 LPDSITFVGILKAC 228
PD++T+ +L AC
Sbjct: 425 -PDAVTWRTLLGAC 437
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 117/328 (35%), Positives = 192/328 (58%), Gaps = 3/328 (0%)
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
K G A +VF+ M + VTW++++ GYV+N + + L L+R +E + FT +S
Sbjct: 209 KCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSS 268
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 182
V+ C+ L AL K +H ++ + N ++++ VDMYAKCG + S +F V +
Sbjct: 269 VICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKN 328
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
+ +WN +I+G A H + + +F +M+ + + P+ +TF +L C H GLV EGR F
Sbjct: 329 LELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK 388
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 302
+M+ + + P + HY MVD+LGRAG L EA +IK++P +P IW +LL++CR++
Sbjct: 389 LMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNL 448
Query: 303 ELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIEL 359
ELAE A + LE +G+ VLLSN+Y + K W + R +++ V+K RGKSWI++
Sbjct: 449 ELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDI 508
Query: 360 GDSIHQFNAADQSHAEMKAIHRVLEGLI 387
D +H F+ + H ++ I L+ L+
Sbjct: 509 KDKVHTFSVGESGHPRIREICSTLDNLV 536
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 135/253 (53%), Gaps = 10/253 (3%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N++I + K G ++AR+VFD M R +V+WNT+IG Y +N + L +F M + +
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFK 159
Query: 115 PDGFTFASVVTGCARLGALCNA---KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
FT +SV++ C G C+A K +H L ++ + LN + AL+D+YAKCG I +
Sbjct: 160 FSEFTISSVLSAC---GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDA 216
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 231
QVF+++ W++M+ G + +A+ ++ R + ++ + T ++ ACS+
Sbjct: 217 VQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNL 276
Query: 232 GLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 290
+ EG++ H I ++ F + + VD+ + G+L E+ +I + E ++ +W
Sbjct: 277 AALIEGKQMHAVICKSGF--GSNVFVASSAVDMYAKCGSLRES-YIIFSEVQEKNLELWN 333
Query: 291 ALLSACRIHGKKE 303
++S H + +
Sbjct: 334 TIISGFAKHARPK 346
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 7/209 (3%)
Query: 127 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 186
CAR GA+ AK HG ++ ++ + L L++ Y+KCG +++++QVFD + + W
Sbjct: 71 CARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSW 130
Query: 187 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS-HCGLVNEGREHFNIMQ 245
N MI + + +A+ +F M E T +L AC +C + + H +
Sbjct: 131 NTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLH--CLS 188
Query: 246 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
+ I L ++DL + G +++A + ++M + V W ++++ + E A
Sbjct: 189 VKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAGYVQNKNYEEA 247
Query: 306 EFAIANISR--LESGDFVLLSNMYCSLKN 332
R LE F LS++ C+ N
Sbjct: 248 LLLYRRAQRMSLEQNQFT-LSSVICACSN 275
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 78/166 (46%), Gaps = 3/166 (1%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
+ F + ++ K G + +F ++ +++ WNT+I G+ K+ R + + LF M
Sbjct: 297 NVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQ 356
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKR-VKLNYILSAALVDMYAKCGRI 168
+ P+ TF+S+++ C G + + LM + N + + +VD+ + G +
Sbjct: 357 QDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLL 416
Query: 169 DVSKQVFDTVARDHV-SVWNAMINGLAVH-GLALDAIAVFSRMEVE 212
+ ++ ++ D S+W +++ V+ L L +A E+E
Sbjct: 417 SEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELE 462
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/361 (37%), Positives = 198/361 (54%), Gaps = 17/361 (4%)
Query: 39 HIAHHVFSRVMDTFSKNLVIESLMKAGECD---IARKVFDKMPVRDVVTWNTLIGGYVKN 95
H HV S ++D +SK G CD + KVF ++ D+V WNT+I GY N
Sbjct: 272 HQNSHVGSGLIDFYSK---------CGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMN 322
Query: 96 VRFLD-GLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYI- 153
+ ++ FR M PD +F V + C+ L + K +HGL ++ + N I
Sbjct: 323 EELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRIS 382
Query: 154 LSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVEN 213
++ AL+ +Y K G + ++ VFD + + +N MI G A HG +A+ ++ RM
Sbjct: 383 VNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSG 442
Query: 214 VLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEA 273
+ P+ ITFV +L AC+HCG V+EG+E+FN M+ F I+P+ EHY M+DLLGRAG LEEA
Sbjct: 443 IAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEA 502
Query: 274 CNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANI---SRLESGDFVLLSNMYCSL 330
I AMP +P V W ALL ACR H LAE A + L + +V+L+NMY
Sbjct: 503 ERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADA 562
Query: 331 KNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRA 390
+ W VR M+ +RKK G SWIE+ H F A D SH ++ ++ LE ++++
Sbjct: 563 RKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKM 622
Query: 391 K 391
K
Sbjct: 623 K 623
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 148/323 (45%), Gaps = 16/323 (4%)
Query: 2 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVF--SRVMDTFSKNLVIE 59
D T HA + A+ L ++ Y++C + A F + + FS N++++
Sbjct: 23 DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVK 82
Query: 60 SLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFT 119
+ K + IAR++FD++P D V++NTLI GY + LF+ M E DGFT
Sbjct: 83 AYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFT 142
Query: 120 FASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA 179
+ ++ C L K +H + ++ A V Y+K G + + VF +
Sbjct: 143 LSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMD 200
Query: 180 --RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEG 237
RD VS WN+MI H A+A++ M + D T +L A + + G
Sbjct: 201 ELRDEVS-WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGG 259
Query: 238 RE-HFNIMQNRFLIQPQLEHYGT-MVDLLGRAGNLEEACNMIKAMP--VEPDVVIWRALL 293
R+ H +++ F Q H G+ ++D + G + + K + PD+V+W ++
Sbjct: 260 RQFHGKLIKAGF---HQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMI 316
Query: 294 SACRIHGKKELAEFAIANISRLE 316
S ++ +EL+E A+ + +++
Sbjct: 317 SGYSMN--EELSEEAVKSFRQMQ 337
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 245 bits (625), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 142/376 (37%), Positives = 202/376 (53%), Gaps = 13/376 (3%)
Query: 24 LVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRD 81
L A + YA+C + A +F + + ++ +I A AR +F KM R+
Sbjct: 291 LSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERN 350
Query: 82 VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVH- 140
VV+WN LI GY +N + L LF + V P ++FA+++ CA L L H
Sbjct: 351 VVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHV 410
Query: 141 -----GLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF-DTVARDHVSVWNAMINGLA 194
G + + + + +L+DMY KCG ++ VF + RD VS WNAMI G A
Sbjct: 411 HVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS-WNAMIIGFA 469
Query: 195 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQL 254
+G +A+ +F M PD IT +G+L AC H G V EGR +F+ M F + P
Sbjct: 470 QNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLR 529
Query: 255 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISR 314
+HY MVDLLGRAG LEEA +MI+ MP++PD VIW +LL+AC++H L ++ +
Sbjct: 530 DHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLE 589
Query: 315 LE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQ 371
+E SG +VLLSNMY L W + VR M+ GV K+ G SWI++ H F D+
Sbjct: 590 VEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDK 649
Query: 372 SHAEMKAIHRVLEGLI 387
SH K IH +L+ LI
Sbjct: 650 SHPRKKQIHSLLDILI 665
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 142/276 (51%), Gaps = 4/276 (1%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGEC 67
HA +I G++ + LI Y++C VF ++ + ++ N V+ L K G
Sbjct: 43 HASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFL 102
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
D A +F MP RD TWN+++ G+ ++ R + L F M + ++FASV++ C
Sbjct: 103 DEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSAC 162
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 187
+ L + VH L+ + + + +ALVDMY+KCG ++ +++VFD + +V WN
Sbjct: 163 SGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWN 222
Query: 188 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQN 246
++I +G A++A+ VF M V PD +T ++ AC+ + G+E H +++N
Sbjct: 223 SLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKN 282
Query: 247 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV 282
L + + VD+ + ++EA + +MP+
Sbjct: 283 DKL-RNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 150/281 (53%), Gaps = 38/281 (13%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D + + +++ K G + A++VFD+M R+VV+WN+LI + +N ++ L +F+ ML
Sbjct: 186 DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML 245
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEK-RVKLNYILSAALVDMYAKCGRI 168
+ VEPD T ASV++ CA L A+ + VHG +++ +++ + ILS A VDMYAKC RI
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305
Query: 169 DVSKQVFDT-------------------------------VARDHVSVWNAMINGLAVHG 197
++ +FD+ +A +V WNA+I G +G
Sbjct: 306 KEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 365
Query: 198 LALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEH 256
+A+++F ++ E+V P +F ILKAC+ ++ G + H +++++ F Q E
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEED 425
Query: 257 Y----GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
+++D+ + G +EE + + M +E D V W A++
Sbjct: 426 DIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 99/252 (39%), Gaps = 77/252 (30%)
Query: 116 DGFTFASVVTGC--ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 173
D FA ++ C ++L A+ ++VH +++ + L+D Y+KCG ++ +Q
Sbjct: 18 DSSPFAKLLDSCIKSKLSAI-YVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 174 VFDTVARDHV-------------------------------SVWNAMINGLAVHGLALDA 202
VFD + + ++ WN+M++G A H +A
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 203 IAVFSRMEVENVLPDSITFVGILKACS--------------------------------- 229
+ F+ M E + + +F +L ACS
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 230 --HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEP 284
CG VN+ + F+ M +R ++ + +++ + G EA ++ + M VEP
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVS-----WNSLITCFEQNGPAVEALDVFQMMLESRVEP 251
Query: 285 DVVIWRALLSAC 296
D V +++SAC
Sbjct: 252 DEVTLASVISAC 263
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 245 bits (625), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 133/364 (36%), Positives = 208/364 (57%), Gaps = 7/364 (1%)
Query: 27 ALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVT 84
ALI Y + AH VF + D S N ++ + G+ A+ +F M + +V+
Sbjct: 149 ALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVS 208
Query: 85 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 144
W +I GY +++ + FR M A +EPD + SV+ CA+LG+L KW+H L
Sbjct: 209 WTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH-LYA 267
Query: 145 EKRVKLNYI-LSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAI 203
E+R L + AL++MY+KCG I + Q+F + V W+ MI+G A HG A AI
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327
Query: 204 AVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDL 263
F+ M+ V P+ ITF+G+L ACSH G+ EG +F++M+ + I+P++EHYG ++D+
Sbjct: 328 ETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387
Query: 264 LGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLES---GDF 320
L RAG LE A + K MP++PD IW +LLS+CR G ++A A+ ++ LE G++
Sbjct: 388 LARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNY 447
Query: 321 VLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIH 380
VLL+N+Y L W + R+R M++ ++K G S IE+ + + +F + D S I
Sbjct: 448 VLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEIS 507
Query: 381 RVLE 384
VL+
Sbjct: 508 IVLQ 511
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 36/271 (13%)
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE-PDGFTFA 121
K + D A ++F+++ +V +N++I Y N + D +R+++ +L E PD FTF
Sbjct: 54 KIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFP 113
Query: 122 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-AR 180
+ CA LG+ K VHG + + + + + AL+DMY K + + +VFD + R
Sbjct: 114 FMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYER 173
Query: 181 DHVS------------------------------VWNAMINGLAVHGLALDAIAVFSRME 210
D +S W AMI+G G ++A+ F M+
Sbjct: 174 DVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQ 233
Query: 211 VENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGN 269
+ + PD I+ + +L +C+ G + G+ H + FL Q + ++++ + G
Sbjct: 234 LAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGV--CNALIEMYSKCGV 291
Query: 270 LEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
+ +A + M + DV+ W ++S HG
Sbjct: 292 ISQAIQLFGQMEGK-DVISWSTMISGYAYHG 321
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 245 bits (625), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 131/348 (37%), Positives = 196/348 (56%), Gaps = 3/348 (0%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
++F + ++ K G+ + AR VFD M +D+VTW+T+I GY N +G+ LF ML
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQML 305
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
++PD F+ ++ CA LGAL +W L+ N ++ AL+DMYAKCG +
Sbjct: 306 QENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMA 365
Query: 170 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
+VF + + + NA I+GLA +G + AVF + E + PD TF+G+L C
Sbjct: 366 RGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCV 425
Query: 230 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 289
H GL+ +G FN + + ++ +EHYG MVDL GRAG L++A +I MP+ P+ ++W
Sbjct: 426 HAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVW 485
Query: 290 RALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIG 346
ALLS CR+ +LAE + + LE +G++V LSN+Y W A VR+MM
Sbjct: 486 GALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKK 545
Query: 347 GVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
G++K G SWIEL +H+F A D+SH I+ LE L + G
Sbjct: 546 GMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMG 593
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 131/246 (53%), Gaps = 3/246 (1%)
Query: 64 AGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 123
+G + A K+FD++P R VVTW L GY + R + + LF+ M+ V+PD + V
Sbjct: 159 SGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQV 218
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
++ C +G L + +W+ M E ++ N + LV++YAKCG+++ ++ VFD++ +
Sbjct: 219 LSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDI 278
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 243
W+ MI G A + + I +F +M EN+ PD + VG L +C+ G ++ G ++
Sbjct: 279 VTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISL 338
Query: 244 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 303
+ +R L ++D+ + G + + K M E D+VI A +S +G +
Sbjct: 339 I-DRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVK 396
Query: 304 LAEFAI 309
L+ FA+
Sbjct: 397 LS-FAV 401
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 17/277 (6%)
Query: 25 VAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVT 84
VA ++ + H I HH+ DTF NL+++ + + + +F ++
Sbjct: 22 VACTVNHLKQIHVSLINHHLHH---DTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFL 78
Query: 85 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 144
+N+LI G+V N F + L LF + + GFTF V+ C R + +H L++
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 145 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIA 204
+ + +L+ +Y+ GR++ + ++FD + V W A+ +G G +AI
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 205 VFSRMEVENVLPDSITFVGILKACSHCGLVNEGR------EHFNIMQNRFLIQPQLEHYG 258
+F +M V PDS V +L AC H G ++ G E + +N F+
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFV-------RT 251
Query: 259 TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
T+V+L + G +E+A ++ +M VE D+V W ++
Sbjct: 252 TLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQG 287
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 244 bits (623), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 210/367 (57%), Gaps = 10/367 (2%)
Query: 27 ALISTYARCHQPHIAHHVFSRVMDTFSK--NLVIESLMKAGECDIARKVFDKMPVRDVVT 84
AL+ + +C A VF + D K ++ + G D AR +F++ PV+DVV
Sbjct: 187 ALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVL 246
Query: 85 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 144
W ++ GYV+ RF + L LFR M +A + PD F S++TGCA+ GAL KW+HG +
Sbjct: 247 WTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIN 306
Query: 145 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIA 204
E RV ++ ++ ALVDMYAKCG I+ + +VF + + W ++I GLA++G++ A+
Sbjct: 307 ENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALD 366
Query: 205 VFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLL 264
++ ME V D+ITFV +L AC+H G V EGR+ F+ M R +QP+ EH ++DLL
Sbjct: 367 LYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLL 426
Query: 265 GRAGNLEEACNMIKAMPVEPD---VVIWRALLSACRIHGKKELAEFAIANISRLESGD-- 319
RAG L+EA +I M E D V ++ +LLSA R +G ++AE + ++E D
Sbjct: 427 CRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSS 486
Query: 320 -FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQ--SHAEM 376
LL+++Y S W + VR MK G+RK G S IE+ H+F D SH +M
Sbjct: 487 AHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKM 546
Query: 377 KAIHRVL 383
I+ +L
Sbjct: 547 DEINSML 553
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 137/285 (48%), Gaps = 39/285 (13%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM- 108
D++ N ++ G+ +I KVFD+MP RDVV+WN LI YV N RF D + +F+ M
Sbjct: 80 DSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMS 139
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
+ ++ D T S ++ C+ L L + ++ ++ + +++ + ALVDM+ KCG +
Sbjct: 140 QESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCL 198
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL------------- 215
D ++ VFD++ +V W +M+ G G +A +F R V++V+
Sbjct: 199 DKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFN 258
Query: 216 ------------------PDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEH 256
PD+ V +L C+ G + +G+ H I +NR + +
Sbjct: 259 RFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVV-- 316
Query: 257 YGT-MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
GT +VD+ + G +E A + + E D W +L+ ++G
Sbjct: 317 -GTALVDMYAKCGCIETALEVFYEIK-ERDTASWTSLIYGLAMNG 359
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 18/276 (6%)
Query: 82 VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHG 141
++ +N ++ F L LF + + PD FT V+ RL + + VHG
Sbjct: 11 LLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHG 70
Query: 142 LMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALD 201
++ ++ + +S +L+ MYA G+I+++ +VFD + + V WN +I+ +G D
Sbjct: 71 YAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFED 130
Query: 202 AIAVFSRMEVENVLP-DSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTM 260
AI VF RM E+ L D T V L ACS + G + + F + ++ + +
Sbjct: 131 AIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--AL 188
Query: 261 VDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL----LSACRIHGKKELAEFAIANISRLE 316
VD+ + G L++A + +M + +V W ++ +S RI + L E R
Sbjct: 189 VDMFCKCGCLDKARAVFDSMR-DKNVKCWTSMVFGYVSTGRIDEARVLFE-------RSP 240
Query: 317 SGDFVL---LSNMYCSLKNWHNAERVRNMMKIGGVR 349
D VL + N Y + A + M+ G+R
Sbjct: 241 VKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 243 bits (621), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/344 (38%), Positives = 195/344 (56%), Gaps = 4/344 (1%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS-AEV 113
N V+ K G D AR VF+ +P DV++WNT+I GY +N + + ++ M E+
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEI 447
Query: 114 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 173
+ T+ SV+ C++ GAL +HG +L+ + L+ + +L DMY KCGR++ +
Sbjct: 448 AANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS 507
Query: 174 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 233
+F + R + WN +I HG A+ +F M E V PD ITFV +L ACSH GL
Sbjct: 508 LFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGL 567
Query: 234 VNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
V+EG+ F +MQ + I P L+HYG MVD+ GRAG LE A IK+M ++PD IW ALL
Sbjct: 568 VDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALL 627
Query: 294 SACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRK 350
SACR+HG +L + A ++ +E G VLLSNMY S W + +R++ G+RK
Sbjct: 628 SACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRK 687
Query: 351 KRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
G S +E+ + + F +Q+H + ++R L L + K G
Sbjct: 688 TPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIG 731
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 155/340 (45%), Gaps = 15/340 (4%)
Query: 18 YATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKM 77
Y T+PS++ A T ++ H F + D + +I + AR +FD+M
Sbjct: 153 YRTFPSVLKA-CRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEM 211
Query: 78 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 137
PVRD+ +WN +I GY ++ + L L G+ + D T S+++ C G
Sbjct: 212 PVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGV 267
Query: 138 WVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-ARDHVSVWNAMINGLAVH 196
+H ++ ++ +S L+D+YA+ GR+ ++VFD + RD +S WN++I ++
Sbjct: 268 TIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS-WNSIIKAYELN 326
Query: 197 GLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR--EHFNIMQNRFLIQPQL 254
L AI++F M + + PD +T + + S G + R + F + + FL +
Sbjct: 327 EQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITI 386
Query: 255 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISR 314
+ +V + + G ++ A + +P DV+ W ++S +G A + NI
Sbjct: 387 GN--AVVVMYAKLGLVDSARAVFNWLP-NTDVISWNTIISGYAQNGFASEA-IEMYNIME 442
Query: 315 LESGDFVLLSNMYCS-LKNWHNAERVRNMMKIGGVRKKRG 353
E G+ + S L A +R MK+ G K G
Sbjct: 443 -EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNG 481
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 128/267 (47%), Gaps = 20/267 (7%)
Query: 65 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR-GMLSAEVEPDGFTFASV 123
G +AR FD + RDV WN +I GY + + +R F MLS+ + PD TF SV
Sbjct: 100 GNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSV 159
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
+ C + + +H L L+ + ++A+L+ +Y++ + ++ +FD + +
Sbjct: 160 LKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDM 216
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 243
WNAMI+G G A +A+ + + + DS+T V +L AC+ G N G +
Sbjct: 217 GSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRG-----V 267
Query: 244 MQNRFLIQPQLEH----YGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIH 299
+ + I+ LE ++DL G L + + M V D++ W +++ A ++
Sbjct: 268 TIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR-DLISWNSIIKAYELN 326
Query: 300 GK--KELAEFAIANISRLESGDFVLLS 324
+ + ++ F +SR++ L+S
Sbjct: 327 EQPLRAISLFQEMRLSRIQPDCLTLIS 353
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 86/172 (50%), Gaps = 13/172 (7%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
+D F + + K G + A +F ++P + V WNTLI + + + LF+ M
Sbjct: 484 LDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM 543
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAAL------VDMY 162
L V+PD TF ++++ C+ G + +W +M + +Y ++ +L VDMY
Sbjct: 544 LDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMM-----QTDYGITPSLKHYGCMVDMY 598
Query: 163 AKCGRIDVSKQVFDTVA-RDHVSVWNAMINGLAVHG-LALDAIAVFSRMEVE 212
+ G+++ + + +++ + S+W A+++ VHG + L IA EVE
Sbjct: 599 GRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE 650
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 7/173 (4%)
Query: 133 LCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMING 192
L +AK +H ++ + N +SA LV++Y G + +++ FD + V WN MI+G
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 193 LAVHGLALDAIAVFSRMEVENVL-PDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQ 251
G + + I FS + + L PD TF +LKAC +++ + H ++ F+
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR--TVIDGNKIHCLALKFGFMWD 184
Query: 252 PQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA-CRIHGKKE 303
+ +++ L R + A + MPV D+ W A++S C+ KE
Sbjct: 185 VYVA--ASLIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMISGYCQSGNAKE 234
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 207/349 (59%), Gaps = 7/349 (2%)
Query: 53 SKNLVIESLMKAGECDIARKVFDKMPVR-DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 111
++N +I K GE D K+F +M R D VTWN++I GY+ N L L ML
Sbjct: 554 TENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQT 613
Query: 112 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
D F +A+V++ A + L VH + ++ + ++ +ALVDMY+KCGR+D +
Sbjct: 614 GQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYA 673
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKACSH 230
+ F+T+ + WN+MI+G A HG +A+ +F M+++ PD +TFVG+L ACSH
Sbjct: 674 LRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSH 733
Query: 231 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 290
GL+ EG +HF M + + + P++EH+ M D+LGRAG L++ + I+ MP++P+V+IWR
Sbjct: 734 AGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWR 793
Query: 291 ALLSA-CRIHGKK-ELAEFAIANISRLESG---DFVLLSNMYCSLKNWHNAERVRNMMKI 345
+L A CR +G+K EL + A + +LE ++VLL NMY + W + + R MK
Sbjct: 794 TVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKD 853
Query: 346 GGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
V+K+ G SW+ + D +H F A D+SH + I++ L+ L ++ + G
Sbjct: 854 ADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAG 902
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 95/184 (51%), Gaps = 4/184 (2%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D + N +I + ++ G+ ARKVFD+MP+R+ V+W ++ GY +N + L R M+
Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94
Query: 110 SAEVEPDGFTFASVVTGCARLGA--LCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC-G 166
+ + + F SV+ C +G+ + + +HGLM + ++ ++S L+ MY KC G
Sbjct: 95 KEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIG 154
Query: 167 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL- 225
+ + F + + WN++I+ + G A +FS M+ + P TF ++
Sbjct: 155 SVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT 214
Query: 226 KACS 229
ACS
Sbjct: 215 TACS 218
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 140/311 (45%), Gaps = 23/311 (7%)
Query: 2 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM----------DT 51
D +A + + + G +L++T +P + + ++M D
Sbjct: 186 DQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDV--RLLEQIMCTIQKSGLLTDL 243
Query: 52 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 111
F + ++ + K+G ARKVF++M R+ VT N L+ G V+ + +LF M S
Sbjct: 244 FVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM 303
Query: 112 -EVEPDGFTF---ASVVTGCARLGALCNAKWVHG-LMLEKRVKLNYILSAALVDMYAKCG 166
+V P+ + + A L + VHG ++ V + LV+MYAKCG
Sbjct: 304 IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCG 363
Query: 167 RIDVSKQVFDTVA-RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL 225
I +++VF + +D VS WN+MI GL +G ++A+ + M ++LP S T + L
Sbjct: 364 SIADARRVFYFMTDKDSVS-WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSL 422
Query: 226 KACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEP 284
+C+ G++ H + + I + ++ L G L E + +MP E
Sbjct: 423 SSCASLKWAKLGQQIHGESL--KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EH 479
Query: 285 DVVIWRALLSA 295
D V W +++ A
Sbjct: 480 DQVSWNSIIGA 490
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 127/270 (47%), Gaps = 10/270 (3%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N ++ K G AR+VF M +D V+WN++I G +N F++ + ++ M ++
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
P FT S ++ CA L + +HG L+ + LN +S AL+ +YA+ G ++ +++
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 175 FDTVARDHVSVWNAMINGLAVHGLAL-DAIAVFSRMEVENVLPDSITFVGILKACSHCGL 233
F ++ WN++I LA +L +A+ F + + ITF +L A S
Sbjct: 473 FSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSF 532
Query: 234 VNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 292
G++ H ++N + E+ ++ G+ G ++ + M D V W ++
Sbjct: 533 GELGKQIHGLALKNNIADEATTEN--ALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSM 590
Query: 293 LSACRIHGK-----KELAEFAIANISRLES 317
+S IH + +L F + RL+S
Sbjct: 591 ISG-YIHNELLAKALDLVWFMLQTGQRLDS 619
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 67
+T +L YAT S A+ ++T R + H D + +++ K G
Sbjct: 612 QTGQRLDSFMYATVLSAFAS-VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRL 670
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM-LSAEVEPDGFTFASVVTG 126
D A + F+ MPVR+ +WN++I GY ++ + + L+LF M L + PD TF V++
Sbjct: 671 DYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSA 730
Query: 127 CARLGAL 133
C+ G L
Sbjct: 731 CSHAGLL 737
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 118/274 (43%), Gaps = 14/274 (5%)
Query: 37 QPHIAHHVFSRVMDTFSKNLVIESLMKA-GECDIARKVFDKMPVRDVVTWNTLIGGYVKN 95
Q H S +D N++I K G A F + V++ V+WN++I Y +
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 96 VRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLM--LEKRVKL-NY 152
R+F M P +TF S+VT L + + + +M ++K L +
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEP-DVRLLEQIMCTIQKSGLLTDL 243
Query: 153 ILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM-EV 211
+ + LV +AK G + +++VF+ + + N ++ GL +A +F M +
Sbjct: 244 FVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM 303
Query: 212 ENVLPDSITFVGILKACSHCGLVNE-----GREHFNIMQNRFLIQPQLEHYGTMVDLLGR 266
+V P+S +V +L + L E GRE + L+ + +V++ +
Sbjct: 304 IDVSPES--YVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAK 361
Query: 267 AGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
G++ +A + M + D V W ++++ +G
Sbjct: 362 CGSIADARRVFYFM-TDKDSVSWNSMITGLDQNG 394
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 143/393 (36%), Positives = 216/393 (54%), Gaps = 6/393 (1%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAG 65
+TH++++ G+ + +L+ YA C A +F ++ D S ++ K G
Sbjct: 138 QTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCG 197
Query: 66 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 125
+ AR++FD+MP R++ TW+ +I GY KN F + LF M V + SV++
Sbjct: 198 MVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVIS 257
Query: 126 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 185
CA LGAL + + +++ + +N IL ALVDM+ +CG I+ + VF+ +
Sbjct: 258 SCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLS 317
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 245
W+++I GLAVHG A A+ FS+M +P +TF +L ACSH GLV +G E + M+
Sbjct: 318 WSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMK 377
Query: 246 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
I+P+LEHYG +VD+LGRAG L EA N I M V+P+ I ALL AC+I+ E+A
Sbjct: 378 KDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVA 437
Query: 306 EFA---IANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDS 362
E + + SG +VLLSN+Y W E +R+MMK V+K G S IE+
Sbjct: 438 ERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGK 497
Query: 363 IHQFNAA-DQSHAEMKAIHRVLEGLIQRAKFDG 394
I++F DQ H EM I R E ++ + + G
Sbjct: 498 INKFTMGDDQKHPEMGKIRRKWEEILGKIRLIG 530
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 117/264 (44%), Gaps = 37/264 (14%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
A +F ++ ++ +N LI + + ML + + PD TF ++ +
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYA-------------------------- 163
+ + + H ++ + + + +LV MYA
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 164 -----KCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDS 218
KCG ++ ++++FD + ++ W+ MING A + AI +F M+ E V+ +
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 219 ITFVGILKACSHCGLVNEG-REHFNIMQNRFLIQPQLEHYGT-MVDLLGRAGNLEEACNM 276
V ++ +C+H G + G R + ++++ + L GT +VD+ R G++E+A ++
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLIL---GTALVDMFWRCGDIEKAIHV 306
Query: 277 IKAMPVEPDVVIWRALLSACRIHG 300
+ +P E D + W +++ +HG
Sbjct: 307 FEGLP-ETDSLSWSSIIKGLAVHG 329
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 194/340 (57%), Gaps = 3/340 (0%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N I K G+ + K+F+ + ++++V+WNT+I +++N GL F E
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
PD TF +V+ C +G + A+ +HGL++ N ++ AL+D+Y+K GR++ S V
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTV 292
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
F + W AM+ A HG DAI F M + PD +TF +L ACSH GLV
Sbjct: 293 FHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLV 352
Query: 235 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 294
EG+ +F M R+ I P+L+HY MVDLLGR+G L++A +IK MP+EP +W ALL
Sbjct: 353 EEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLG 412
Query: 295 ACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKK 351
ACR++ +L A + LE D +V+LSN+Y + W +A R+RN+MK G+ +
Sbjct: 413 ACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRA 472
Query: 352 RGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 391
G S+IE G+ IH+F D SH E + I + L+ + ++ K
Sbjct: 473 SGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMK 512
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 137/285 (48%), Gaps = 12/285 (4%)
Query: 25 VAALISTYARCHQPHIAHHVFSRVMDT------FSKNLVIESLMKAGECDIARKVFDKMP 78
V++LI+ C + + +V+ + F + ++ ++ G A K+FD+MP
Sbjct: 34 VSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMP 93
Query: 79 VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV--EPDGFTFASVVTGCARLGALCNA 136
RD+V+WN+LI GY + M+ +EV P+ TF S+++ C G+
Sbjct: 94 ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEG 153
Query: 137 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 196
+ +HGL+++ V + A ++ Y K G + S ++F+ ++ ++ WN MI +
Sbjct: 154 RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQN 213
Query: 197 GLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLE 255
GLA +A F+ PD TF+ +L++C G+V + H IM F +
Sbjct: 214 GLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCIT 273
Query: 256 HYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
++DL + G LE++ + + PD + W A+L+A HG
Sbjct: 274 --TALLDLYSKLGRLEDSSTVFHEI-TSPDSMAWTAMLAAYATHG 315
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 241 bits (614), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 202/387 (52%), Gaps = 34/387 (8%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 67
+ HA+ V G+++ AL++ Y+RC G+
Sbjct: 612 QIHAQACVSGFSSDLPFQNALVTLYSRC-----------------------------GKI 642
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
+ + F++ D + WN L+ G+ ++ + LR+F M ++ + FTF S V
Sbjct: 643 EESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAA 702
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI-DVSKQVFDTVARDHVSVW 186
+ + K VH ++ + + AL+ MYAKCG I D KQ + ++ VS W
Sbjct: 703 SETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS-W 761
Query: 187 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 246
NA+IN + HG +A+ F +M NV P+ +T VG+L ACSH GLV++G +F M +
Sbjct: 762 NAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNS 821
Query: 247 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAE 306
+ + P+ EHY +VD+L RAG L A I+ MP++PD ++WR LLSAC +H E+ E
Sbjct: 822 EYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGE 881
Query: 307 FAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSI 363
FA ++ LE D +VLLSN+Y K W + R MK GV+K+ G+SWIE+ +SI
Sbjct: 882 FAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSI 941
Query: 364 HQFNAADQSHAEMKAIHRVLEGLIQRA 390
H F DQ+H IH + L +RA
Sbjct: 942 HSFYVGDQNHPLADEIHEYFQDLTKRA 968
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 128/242 (52%), Gaps = 4/242 (1%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N +I+ + G D+AR+VFD + ++D +W +I G KN + +RLF M +
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
P + F+SV++ C ++ +L + +HGL+L+ + + ALV +Y G + ++ +
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
F +++ +N +INGL+ G A+ +F RM ++ + PDS T ++ ACS G +
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL 405
Query: 235 NEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
G++ H + F ++E G +++L + ++E A + VE +VV+W +L
Sbjct: 406 FRGQQLHAYTTKLGFASNNKIE--GALLNLYAKCADIETALDYFLETEVE-NVVLWNVML 462
Query: 294 SA 295
A
Sbjct: 463 VA 464
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 137/302 (45%), Gaps = 20/302 (6%)
Query: 6 AAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIE 59
A + + V G P ++++S + I + V+ DT+ N ++
Sbjct: 272 AIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVS 331
Query: 60 SLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFT 119
G A +F M RD VT+NTLI G + + LF+ M +EPD T
Sbjct: 332 LYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNT 391
Query: 120 FASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA 179
AS+V C+ G L + +H + N + AL+++YAKC I+ + F
Sbjct: 392 LASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETE 451
Query: 180 RDHVSVWNAMINGLAVHGLALD---AIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 236
++V +WN M L +GL D + +F +M++E ++P+ T+ ILK C G +
Sbjct: 452 VENVVLWNVM---LVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 508
Query: 237 GRE-HFNIMQNRFLIQPQLEHY--GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
G + H I++ F QL Y ++D+ + G L+ A +++ + DVV W ++
Sbjct: 509 GEQIHSQIIKTNF----QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMI 563
Query: 294 SA 295
+
Sbjct: 564 AG 565
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 119/268 (44%), Gaps = 8/268 (2%)
Query: 43 HVFSRVMDTFSKNLVIESLM----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRF 98
H ++ + S N + +L+ K + + A F + V +VV WN ++ Y
Sbjct: 412 HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDL 471
Query: 99 LDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAAL 158
+ R+FR M E+ P+ +T+ S++ C RLG L + +H +++ +LN + + L
Sbjct: 472 RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVL 531
Query: 159 VDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDS 218
+DMYAK G++D + + A V W MI G + A+ F +M + D
Sbjct: 532 IDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDE 591
Query: 219 ITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMI 277
+ + AC+ + EG++ H + F L +V L R G +EE+
Sbjct: 592 VGLTNAVSACAGLQALKEGQQIHAQACVSGF--SSDLPFQNALVTLYSRCGKIEESYLAF 649
Query: 278 KAMPVEPDVVIWRALLSACRIHGKKELA 305
+ D + W AL+S + G E A
Sbjct: 650 EQTEA-GDNIAWNALVSGFQQSGNNEEA 676
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 46/271 (16%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
A KVFD+MP R + TWN +I + LF M+S V P+ TF+ V+ C R
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-R 197
Query: 130 LGALCN--AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 187
G++ + +H +L + ++ + ++ L+D+Y++ G +D++++VFD + S W
Sbjct: 198 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 188 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS------------------ 229
AMI+GL+ + +AI +F M V ++P F +L AC
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 230 -----------------HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEE 272
H G + F+ M R + Y T+++ L + G E+
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT-----YNTLINGLSQCGYGEK 372
Query: 273 ACNMIKAM---PVEPDVVIWRALLSACRIHG 300
A + K M +EPD +L+ AC G
Sbjct: 373 AMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 14/190 (7%)
Query: 113 VEPDGFTFASVVTGCARL-GALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
+ P+ T ++ GC + G+L + +H +L+ + N LS L D Y G + +
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 231
+VFD + + WN MI LA L + +F RM ENV P+ TF G+L+AC
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC--- 196
Query: 232 GLVNEGREHFNIMQN---RFLIQPQLEHY---GTMVDLLGRAGNLEEACNMIKAMPVEPD 285
G F++++ R L Q + ++DL R G ++ A + + ++ D
Sbjct: 197 ---RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK-D 252
Query: 286 VVIWRALLSA 295
W A++S
Sbjct: 253 HSSWVAMISG 262
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 210/374 (56%), Gaps = 13/374 (3%)
Query: 27 ALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVT 84
+I Y +C A VF + D S +I + + G + A ++F+ +P +D+V
Sbjct: 189 TMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVA 248
Query: 85 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 144
W ++ G+ +N + + L F M + + D T A ++ CA+LGA A + +
Sbjct: 249 WTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYAD--RAVQI 306
Query: 145 EKRVKLN----YILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLAL 200
++ + ++ +AL+DMY+KCG ++ + VF ++ +V +++MI GLA HG A
Sbjct: 307 AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQ 366
Query: 201 DAIAVFSRMEVEN-VLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGT 259
+A+ +F M + + P+++TFVG L ACSH GLV++GR+ F+ M F +QP +HY
Sbjct: 367 EALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTC 426
Query: 260 MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLES-- 317
MVDLLGR G L+EA +IK M VEP +W ALL ACRIH E+AE A ++ LE
Sbjct: 427 MVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDI 486
Query: 318 -GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSW-IELGDSIHQFNAADQSHAE 375
G+++LLSN+Y S +W RVR ++K G++K SW ++ +H+F + +H
Sbjct: 487 IGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPM 546
Query: 376 MKAIHRVLEGLIQR 389
I LE L++R
Sbjct: 547 SNKIQDKLEELVER 560
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 132/322 (40%), Gaps = 41/322 (12%)
Query: 24 LVAALISTYARC----HQPHIAHHVFSRVMDT--FSKNLVIESLMKAGEC--DIARKVFD 75
LV++LIS C I HV + +D + +I +L K G AR+V +
Sbjct: 48 LVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 76 KMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCN 135
+ R+ W +I GY +F + + ++ M E+ P FTF++++ C + L
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 136 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVS---------- 184
+ H R + ++DMY KC ID +++VFD + RD +S
Sbjct: 168 GRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYAR 227
Query: 185 --------------------VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGI 224
W AM+ G A + +A+ F RME + D +T G
Sbjct: 228 VGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGY 287
Query: 225 LKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGT-MVDLLGRAGNLEEACNMIKAMPVE 283
+ AC+ G I Q G+ ++D+ + GN+EEA N+ +M
Sbjct: 288 ISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN-N 346
Query: 284 PDVVIWRALLSACRIHGKKELA 305
+V + +++ HG+ + A
Sbjct: 347 KNVFTYSSMILGLATHGRAQEA 368
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/341 (37%), Positives = 207/341 (60%), Gaps = 6/341 (1%)
Query: 55 NLVIESLMKAGE--CDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 112
N ++++ K GE +ARK+FD++ +D V++N+++ Y ++ + +FR ++ +
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNK 281
Query: 113 VEP-DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
V + T ++V+ + GAL K +H ++ ++ + I+ +++DMY KCGR++ +
Sbjct: 282 VVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 231
++ FD + +V W AMI G +HG A A+ +F M V P+ ITFV +L ACSH
Sbjct: 342 RKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHA 401
Query: 232 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 291
GL EG FN M+ RF ++P LEHYG MVDLLGRAG L++A ++I+ M ++PD +IW +
Sbjct: 402 GLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSS 461
Query: 292 LLSACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGV 348
LL+ACRIH ELAE ++A + L+S G ++LLS++Y W + ERVR +MK G+
Sbjct: 462 LLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGL 521
Query: 349 RKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQR 389
K G S +EL +H F D+ H + + I+ L L ++
Sbjct: 522 VKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRK 562
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 149/295 (50%), Gaps = 17/295 (5%)
Query: 19 ATYPSLVAALISTYA--RCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDK 76
+++P + A S + Q H VF D F + +I G+ + ARKVFD+
Sbjct: 77 SSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDE 136
Query: 77 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTF------ASVVTGCARL 130
+P R++V+W ++I GY N LD + LF+ +L E + D F SV++ C+R+
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV 196
Query: 131 GALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR--IDVSKQVFDT-VARDHVSVWN 187
A + +H ++++ + L+D YAK G + V++++FD V +D VS +N
Sbjct: 197 PAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVS-YN 255
Query: 188 AMINGLAVHGLALDAIAVFSRMEVENVLP-DSITFVGILKACSHCGLVNEGR-EHFNIMQ 245
++++ A G++ +A VF R+ V+ ++IT +L A SH G + G+ H ++
Sbjct: 256 SIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVI- 314
Query: 246 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
R ++ + +++D+ + G +E A M +V W A+++ +HG
Sbjct: 315 -RMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHG 367
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 81/155 (52%), Gaps = 6/155 (3%)
Query: 81 DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVH 140
DV +WN++I ++ + L F M + P +F + C+ L + + K H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 141 GLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLAL 200
+ + +S+AL+ MY+ CG+++ +++VFD + + ++ W +MI G ++G AL
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 201 DAIAVFSRMEVEN------VLPDSITFVGILKACS 229
DA+++F + V+ + DS+ V ++ ACS
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 192/339 (56%), Gaps = 4/339 (1%)
Query: 57 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 116
++++ +K G+ + A KVF + +D+V W+ ++ GY + +++F + ++P+
Sbjct: 434 LLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPN 493
Query: 117 GFTFASVVTGCARLGA-LCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF 175
FTF+S++ CA A + K HG ++ R+ + +S+AL+ MYAK G I+ +++VF
Sbjct: 494 EFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVF 553
Query: 176 DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVN 235
+ WN+MI+G A HG A+ A+ VF M+ V D +TF+G+ AC+H GLV
Sbjct: 554 KRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVE 613
Query: 236 EGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
EG ++F+IM I P EH MVDL RAG LE+A +I+ MP IWR +L+A
Sbjct: 614 EGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAA 673
Query: 296 CRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKR 352
CR+H K EL A I ++ D +VLLSNMY +W +VR +M V+K+
Sbjct: 674 CRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEP 733
Query: 353 GKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 391
G SWIE+ + + F A D+SH I+ LE L R K
Sbjct: 734 GYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLK 772
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 127/250 (50%), Gaps = 3/250 (1%)
Query: 57 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 116
++++ MK RKVFD+M R+VVTW TLI GY +N + L LF M + +P+
Sbjct: 134 LVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPN 193
Query: 117 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 176
FTFA+ + A G VH ++++ + +S +L+++Y KCG + ++ +FD
Sbjct: 194 SFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFD 253
Query: 177 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 236
V WN+MI+G A +GL L+A+ +F M + V +F ++K C++ +
Sbjct: 254 KTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRF 313
Query: 237 GRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
+ H ++++ FL + ++ + + +A + K + +VV W A++S
Sbjct: 314 TEQLHCSVVKYGFLFDQNIRT--ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG 371
Query: 296 CRIHGKKELA 305
+ KE A
Sbjct: 372 FLQNDGKEEA 381
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 124/253 (49%), Gaps = 9/253 (3%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N +I +K G AR +FDK V+ VVTWN++I GY N L+ L +F M V
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVR 292
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
+FASV+ CA L L + +H +++ + + AL+ Y+KC + + ++
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352
Query: 175 FDTVA-RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 233
F + +V W AMI+G + +A+ +FS M+ + V P+ T+ IL A +
Sbjct: 353 FKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP---V 409
Query: 234 VNEGREHFNIMQNRFLIQPQLEHYGT-MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 292
++ H +++ + + GT ++D + G +EEA + + + D+V W A+
Sbjct: 410 ISPSEVHAQVVKTNY---ERSSTVGTALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAM 465
Query: 293 LSACRIHGKKELA 305
L+ G+ E A
Sbjct: 466 LAGYAQTGETEAA 478
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 105/223 (47%), Gaps = 5/223 (2%)
Query: 79 VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKW 138
V +VV+W +I G+++N + + LF M V P+ FT++ ++T + +
Sbjct: 359 VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISPSE 414
Query: 139 VHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGL 198
VH +++ + + + AL+D Y K G+++ + +VF + + W+AM+ G A G
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 474
Query: 199 ALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG 258
AI +F + + P+ TF IL C+ + F+ + + L
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSS 534
Query: 259 TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
++ + + GN+E A + K E D+V W +++S HG+
Sbjct: 535 ALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQHGQ 576
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 111/232 (47%), Gaps = 4/232 (1%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
A +FDK P RD ++ +L+ G+ ++ R + RLF + +E D F+SV+ A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 189
L + +H ++ + + +LVD Y K ++VFD + +V W +
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 190 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRF 248
I+G A + + + + +F RM+ E P+S TF L + G+ G + H +++N
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG- 224
Query: 249 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
+ + ++++L + GN+ +A + V+ VV W +++S +G
Sbjct: 225 -LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISGYAANG 274
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 127/324 (39%), Positives = 201/324 (62%), Gaps = 14/324 (4%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM-LSAEV 113
N +I+ +K + A +VF ++ +D V+WN++I G V R + + LF M S+ +
Sbjct: 243 NALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGI 302
Query: 114 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 173
+PDG SV++ CA LGA+ + +WVH +L +K + + A+VDMYAKCG I+ + +
Sbjct: 303 KPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALE 362
Query: 174 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 233
+F+ + +V WNA++ GLA+HG L+++ F M P+ +TF+ L AC H GL
Sbjct: 363 IFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGL 422
Query: 234 VNEGREHFNIMQNR-FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 292
V+EGR +F+ M++R + + P+LEHYG M+DLL RAG L+EA ++KAMPV+PDV I A+
Sbjct: 423 VDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAI 482
Query: 293 LSACRIHG-----KKELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGG 347
LSAC+ G KE+ + + +I +SG +VLLSN++ + + W + R+R +MK+ G
Sbjct: 483 LSACKNRGTLMELPKEILD-SFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKG 541
Query: 348 VRKKRGKSWIELGDSIHQFNAADQ 371
+ K G S+IE +F DQ
Sbjct: 542 ISKVPGSSYIE------KFMTLDQ 559
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 132/256 (51%), Gaps = 14/256 (5%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D + +N ++ GE A KVF +MPVRDVV+W +I G+ + + + L F M
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM- 198
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
+VEP+ T+ V+ R+G L K +HGL+L++ ++ AL+DMY KC ++
Sbjct: 199 --DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLS 256
Query: 170 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVEN-VLPDSITFVGILKAC 228
+ +VF + + WN+MI+GL + +AI +FS M+ + + PD +L AC
Sbjct: 257 DAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSAC 316
Query: 229 SHCGLVNEGREHFNIMQNRFLIQPQLE---HYGT-MVDLLGRAGNLEEACNMIKAMPVEP 284
+ G V+ GR + +++ ++ H GT +VD+ + G +E A + +
Sbjct: 317 ASLGAVDHGR-----WVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIR-SK 370
Query: 285 DVVIWRALLSACRIHG 300
+V W ALL IHG
Sbjct: 371 NVFTWNALLGGLAIHG 386
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 108/236 (45%), Gaps = 8/236 (3%)
Query: 84 TWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLM 143
++NTL+ Y + + ++ +S PD FTF V C + + K +HG++
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 144 LEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAI 203
+ + + +LV Y CG + +VF + V W +I G GL +A+
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 204 AVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVD 262
FS+M+VE P+ T+V +L + G ++ G+ H I++ LI LE ++D
Sbjct: 193 DTFSKMDVE---PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLI--SLETGNALID 247
Query: 263 LLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESG 318
+ + L +A + + + D V W +++S +H ++ + ++ + SG
Sbjct: 248 MYVKCEQLSDAMRVFGELE-KKDKVSWNSMISGL-VHCERSKEAIDLFSLMQTSSG 301
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 238 bits (608), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 129/347 (37%), Positives = 199/347 (57%), Gaps = 8/347 (2%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N +I L + GE AR+VFD M R+ +W T+I + +N L+ L LF M V
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
P T S+++ CA L +L + K VH ++ + ++ +++ L+ MY KCG + SK +
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKACSHCGL 233
FD + +WN++I+G A HGL +A+ VF M + + P+ +TFV L ACS+ G+
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 234 VNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
V EG + + M++ F ++P HY MVD+LGRAG EA MI +M VEPD +W +LL
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
Query: 294 SACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRK 350
ACR H + ++AEF + +E SG ++LLSNMY S W + +R +MK VRK
Sbjct: 509 GACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRK 568
Query: 351 KRGKSWIELGDSIHQFNAAD-QSHAEMKAIHRV---LEGLIQRAKFD 393
G SW E+ + +H F SH E ++I ++ L+GL++ A ++
Sbjct: 569 SPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYN 615
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 129/257 (50%), Gaps = 12/257 (4%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D ++ +I L K G D AR++FD+M R V+TW T++ GY +N R D ++F M
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM- 229
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
E ++ S++ G + G + +A+ + +M K V I A++ + G I
Sbjct: 230 ---PEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPV----IACNAMISGLGQKGEIA 282
Query: 170 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
+++VFD++ + + W +I +G L+A+ +F M+ + V P T + IL C+
Sbjct: 283 KARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCA 342
Query: 230 HCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 288
++ G++ H +++ +F + + ++ + + G L ++ + P + D+++
Sbjct: 343 SLASLHHGKQVHAQLVRCQFDVDVYVA--SVLMTMYIKCGELVKSKLIFDRFPSK-DIIM 399
Query: 289 WRALLSACRIHGKKELA 305
W +++S HG E A
Sbjct: 400 WNSIISGYASHGLGEEA 416
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 131/279 (46%), Gaps = 27/279 (9%)
Query: 27 ALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGECDIARKVFDKMPVRDVVT 84
++++ Y P A +F + D S N ++ MK GE D ARKVFD MP R+VV+
Sbjct: 53 SMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVS 112
Query: 85 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 144
W L+ GYV N + LF M E + ++ ++ G + G + +A ++ ++
Sbjct: 113 WTALVKGYVHNGKVDVAESLFWKM----PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIP 168
Query: 145 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIA 204
+K + I +++ K GR+D ++++FD ++ V W M+ G + DA
Sbjct: 169 DK----DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARK 224
Query: 205 VFSRMEVENVLPD--SITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVD 262
+F +V+P+ +++ +L G + + E F +M + +I M+
Sbjct: 225 IF------DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIA-----CNAMIS 273
Query: 263 LLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
LG+ G + +A + +M D W+ ++ +IH +
Sbjct: 274 GLGQKGEIAKARRVFDSMKERNDAS-WQTVI---KIHER 308
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 122/265 (46%), Gaps = 22/265 (8%)
Query: 44 VFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLR 103
+S + + N+ I L + G+ ARK+FD + + +WN+++ GY N+ D +
Sbjct: 10 TYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARK 69
Query: 104 LFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYA 163
LF M + ++ +V+G + G + A+ V LM E+ N + ALV Y
Sbjct: 70 LFDEMPDRNI----ISWNGLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYV 121
Query: 164 KCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLP--DSITF 221
G++DV++ +F + + W M+ G G DA ++ ++P D+I
Sbjct: 122 HNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY------EMIPDKDNIAR 175
Query: 222 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP 281
++ G V+E RE F+ M R +I + TMV G+ +++A + MP
Sbjct: 176 TSMIHGLCKEGRVDEAREIFDEMSERSVIT-----WTTMVTGYGQNNRVDDARKIFDVMP 230
Query: 282 VEPDVVIWRALLSACRIHGKKELAE 306
E V W ++L +G+ E AE
Sbjct: 231 -EKTEVSWTSMLMGYVQNGRIEDAE 254
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 114/242 (47%), Gaps = 15/242 (6%)
Query: 19 ATYPSLVAAL--ISTYARCHQPHIAHHVFSRV---MDTFSKNLVIESLMKAGECDIARKV 73
T+P+L++ L ++ A H H R +D + ++++ +K GE ++ +
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 74 FDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM-LSAEVEPDGFTFASVVTGCARLGA 132
FD+ P +D++ WN++I GY + + L++F M LS +P+ TF + ++ C+ G
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 133 LCNAKWVHGLMLE----KRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWN 187
+ ++ M K + +Y A +VDM + GR + + ++ D++ +VW
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHY---ACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWG 505
Query: 188 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 247
+++ H LD ++ +E +S T++ + + G + E +M+ R
Sbjct: 506 SLLGACRTHS-QLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTR 564
Query: 248 FL 249
+
Sbjct: 565 LV 566
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 238 bits (607), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 140/376 (37%), Positives = 213/376 (56%), Gaps = 15/376 (3%)
Query: 20 TYPSLVAALIS----TYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFD 75
T+P L+ A S T R Q + H F D + N +I + ARKVFD
Sbjct: 115 TFPFLLKACASFLGLTAGRQIQVEVLKHGFD--FDVYVGNNLIHLYGTCKKTSDARKVFD 172
Query: 76 KMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCN 135
+M R+VV+WN+++ V+N + F M+ PD T +++ C G L
Sbjct: 173 EMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSL 230
Query: 136 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAV 195
K VH ++ + ++LN L ALVDMYAK G ++ ++ VF+ + +V W+AMI GLA
Sbjct: 231 GKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQ 290
Query: 196 HGLALDAIAVFSRMEVEN-VLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQL 254
+G A +A+ +FS+M E+ V P+ +TF+G+L ACSH GLV++G ++F+ M+ I+P +
Sbjct: 291 YGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMM 350
Query: 255 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIH------GKKELAEFA 308
HYG MVD+LGRAG L EA + IK MP EPD V+WR LLSAC IH G E +
Sbjct: 351 IHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKR 410
Query: 309 IANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNA 368
+ + SG+ V+++N + + W A VR +MK ++K G+S +ELG S H+F +
Sbjct: 411 LIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFS 470
Query: 369 ADQSHAEMKAIHRVLE 384
+E +I+ +L+
Sbjct: 471 GYDPRSEYVSIYELLD 486
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 130/292 (44%), Gaps = 13/292 (4%)
Query: 28 LISTYARCHQPHIAHHVFSRVMDTF--SKNLVIESLMKAGECDIARKVFDKMPVRDVVTW 85
L S+ Q H H+ S D+F S+ + + SL A + AR + TW
Sbjct: 22 LCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTW 81
Query: 86 NTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLE 145
N L GY + ++ + ++ M ++P+ TF ++ CA L + + +L+
Sbjct: 82 NMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLK 141
Query: 146 KRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAV 205
+ + L+ +Y C + +++VFD + +V WN+++ L +G
Sbjct: 142 HGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFEC 201
Query: 206 FSRMEVENVLPDSITFVGILKACSHCGLVNEGR-EHFNIMQNRFLIQPQLEHYGT-MVDL 263
F M + PD T V +L AC G ++ G+ H +M + +L GT +VD+
Sbjct: 202 FCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRL---GTALVDM 256
Query: 264 LGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRL 315
++G LE A + + M V+ +V W A++ +G AE A+ S++
Sbjct: 257 YAKSGGLEYARLVFERM-VDKNVWTWSAMIVGLAQYG---FAEEALQLFSKM 304
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 238 bits (606), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 193/344 (56%), Gaps = 8/344 (2%)
Query: 20 TYPSLVAA-----LISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVF 74
TYPSL A + R H+ + D F + ++ G+ AR +F
Sbjct: 114 TYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLF 173
Query: 75 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 134
+++ D+ TWNTL+ Y + + + +V P+ + +++ CA LG
Sbjct: 174 ERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFV 233
Query: 135 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLA 194
W H +L+ + LN + +L+D+Y+KCG + +++VFD +++ VS +NAMI GLA
Sbjct: 234 RGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLA 293
Query: 195 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQL 254
VHG + I ++ + + ++PDS TFV + ACSH GLV+EG + FN M+ + I+P++
Sbjct: 294 VHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKV 353
Query: 255 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISR 314
EHYG +VDLLGR+G LEEA IK MPV+P+ +WR+ L + + HG E E A+ ++
Sbjct: 354 EHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLG 413
Query: 315 LE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKS 355
LE SG++VLLSN+Y + W + E+ R +MK V K G S
Sbjct: 414 LEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 238 bits (606), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 192/333 (57%), Gaps = 5/333 (1%)
Query: 64 AGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 123
+GE + A KVF++MP R+VV+W +I G+ + R L+L+ M + +P+ +TF ++
Sbjct: 168 SGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTAL 227
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
++ C GAL + VH L +K +S +L+ MY KCG + + ++FD + V
Sbjct: 228 LSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDV 287
Query: 184 SVWNAMINGLAVHGLALDAIAVFS-RMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
WN+MI G A HGLA+ AI +F M PD+IT++G+L +C H GLV EGR+ FN
Sbjct: 288 VSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFN 347
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 302
+M L +P+L HY +VDLLGR G L+EA +I+ MP++P+ VIW +LL +CR+HG
Sbjct: 348 LMAEHGL-KPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDV 406
Query: 303 ELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIEL 359
A LE + V L+N+Y S+ W A VR +MK G++ G SWIE+
Sbjct: 407 WTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEI 466
Query: 360 GDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKF 392
+ + F A D S+ M I VL LI +F
Sbjct: 467 NNYVFMFKAEDGSNCRMLEIVHVLHCLIDHMEF 499
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 110 SAEVEPDGFTF-----ASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK 164
S+ V+ DG++F +S V C H L L+ + L ++LV +Y
Sbjct: 108 SSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRD 167
Query: 165 CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGI 224
G ++ + +VF+ + +V W AMI+G A + ++S+M P+ TF +
Sbjct: 168 SGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTAL 227
Query: 225 LKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE 283
L AC+ G + +GR H + ++ L +++ + + G+L++A +
Sbjct: 228 LSACTGSGALGQGRSVHCQTLH--MGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-N 284
Query: 284 PDVVIWRALLSACRIHG 300
DVV W ++++ HG
Sbjct: 285 KDVVSWNSMIAGYAQHG 301
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 217/397 (54%), Gaps = 13/397 (3%)
Query: 4 TTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTF--SKNLVIESL 61
+ A K H +I G+ Y ALI Y + + A H+F ++ + S N +I S
Sbjct: 311 SIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSF 370
Query: 62 MKAGECDIARKVFDKMPVRD--------VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV 113
+ AG+ D A +F ++ + VVTW ++I G R D L FR M ++V
Sbjct: 371 VDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKV 430
Query: 114 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 173
+ T +++ CA L AL + +HG ++ + N ++ ALV+MYAKCG +
Sbjct: 431 LANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSL 490
Query: 174 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 233
VF+ + + WN++I G +HG A A+++F RM PD I V +L ACSH GL
Sbjct: 491 VFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGL 550
Query: 234 VNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
V +GRE F M RF ++PQ EHY +VDLLGR G L+EA ++K MP+EP V + ALL
Sbjct: 551 VEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALL 610
Query: 294 SACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRK 350
++CR+H ++AE + +S LE +G ++LLSN+Y + W + VR + K ++K
Sbjct: 611 NSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKK 670
Query: 351 KRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLI 387
G SWIE+ ++F++ +E + I+ VLE L+
Sbjct: 671 VSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLV 707
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 154/361 (42%), Gaps = 60/361 (16%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAGEC 67
H ++I G +V L++ Y + + A+++F V + S N++I+ + +C
Sbjct: 181 HTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDC 240
Query: 68 DIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 123
+ A K+F+ M D VTW +++ + + +F D L+ F M + G A
Sbjct: 241 ESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVF 300
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
+ CA L AL A+ VHG +++ + AL+ +Y K G++ ++ +F + +
Sbjct: 301 FSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGI 360
Query: 184 SVWNAMIN---------------------------------------GLAVHGLALDAIA 204
WN++I G V G D++
Sbjct: 361 ESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLE 420
Query: 205 VFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNI----MQNRFLIQPQLEHYGT 259
F +M+ VL +S+T IL C+ +N GRE H ++ M L+Q
Sbjct: 421 YFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQ------NA 474
Query: 260 MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGD 319
+V++ + G L E + +A+ + D++ W +++ +HG AE A++ R+ S
Sbjct: 475 LVNMYAKCGLLSEGSLVFEAIR-DKDLISWNSIIKGYGMHG---FAEKALSMFDRMISSG 530
Query: 320 F 320
F
Sbjct: 531 F 531
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 109/240 (45%), Gaps = 29/240 (12%)
Query: 8 KTHAKLIVHGYATYP-SLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGE 66
+ HA++++ + SL A LIS YAR A +VF V +LV+ S
Sbjct: 74 QVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETV------SLVLLS------ 121
Query: 67 CDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTG 126
D+ WN+++ V + + + L L+RGM + DG+ ++
Sbjct: 122 --------------DLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRA 167
Query: 127 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF-DTVARDHVSV 185
C LG + H +++ +K N + L+ +Y K GR+ + +F + R+ +S
Sbjct: 168 CRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMS- 226
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 245
WN MI G + A+ +F M+ E PD +T+ +L S CG + ++F++M+
Sbjct: 227 WNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMR 286
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 154 LSAALVDMYAKCGRIDVSKQVFDTVA---RDHVSVWNAMINGLAVHGLALDAIAVFSRME 210
L+A L+ +YA+ G + ++ VF+TV+ + +WN+++ HGL +A+ ++ M
Sbjct: 91 LAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMR 150
Query: 211 VENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGN 269
+ D IL+AC + G R H ++Q ++ L ++ L +AG
Sbjct: 151 QRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQ--IGLKENLHVVNELLTLYPKAGR 208
Query: 270 LEEACNMIKAMPV 282
+ +A N+ MPV
Sbjct: 209 MGDAYNLFVEMPV 221
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/318 (38%), Positives = 188/318 (59%), Gaps = 4/318 (1%)
Query: 80 RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWV 139
+ +V W ++ G+ +N + + L+ ++ M V PD TF +V+ C+ L +L + +
Sbjct: 695 KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI 754
Query: 140 HGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR-DHVSVWNAMINGLAVHGL 198
H L+ L+ + S L+DMYAKCG + S QVFD + R +V WN++ING A +G
Sbjct: 755 HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814
Query: 199 ALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG 258
A DA+ +F M +++PD ITF+G+L ACSH G V++GR+ F +M ++ I+ +++H
Sbjct: 815 AEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVA 874
Query: 259 TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE-- 316
MVDLLGR G L+EA + I+A ++PD +W +LL ACRIHG E + + LE
Sbjct: 875 CMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQ 934
Query: 317 -SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAE 375
S +VLLSN+Y S W A +R +M+ GV+K G SWI++ H F A D+SH+E
Sbjct: 935 NSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSE 994
Query: 376 MKAIHRVLEGLIQRAKFD 393
+ I LE L K D
Sbjct: 995 IGKIEMFLEDLYDLMKDD 1012
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 143/299 (47%), Gaps = 15/299 (5%)
Query: 17 GYATYPSLVAALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIA 70
GY +L+ST A H + S ++ + F N +++ K G + A
Sbjct: 423 GYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDA 482
Query: 71 RKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARL 130
R++F++M RD VTWNT+IG YV++ + LF+ M + DG AS + C +
Sbjct: 483 RQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHV 542
Query: 131 GALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMI 190
L K VH L ++ + + ++L+DMY+KCG I +++VF ++ V NA+I
Sbjct: 543 HGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALI 602
Query: 191 NGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFL 249
G + + L +A+ +F M V P ITF I++AC + G + H I + F
Sbjct: 603 AGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGF- 660
Query: 250 IQPQLEHYGTMVDLLGRAGN---LEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
+ E+ G + LLG N + EAC + + +V+W ++S +G E A
Sbjct: 661 -SSEGEYLG--ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEA 716
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 140/287 (48%), Gaps = 33/287 (11%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDI 69
HA+ I G A+ + ++L+S Y++C + M+A
Sbjct: 350 HAEAIKLGLASNIYVGSSLVSMYSKCEK------------------------MEA----- 380
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
A KVF+ + ++ V WN +I GY N + LF M S+ D FTF S+++ CA
Sbjct: 381 AAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAA 440
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNA 188
L H ++++K++ N + ALVDMYAKCG ++ ++Q+F+ + RD+V+ WN
Sbjct: 441 SHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVT-WNT 499
Query: 189 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 248
+I +A +F RM + ++ D LKAC+H + +G++ + + +
Sbjct: 500 IIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ-VHCLSVKC 558
Query: 249 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
+ L +++D+ + G +++A + ++P E VV AL++
Sbjct: 559 GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP-EWSVVSMNALIAG 604
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 6/214 (2%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N +++ K + A K FD + +DV WN+++ Y + LR F + ++
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIF 157
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
P+ FTF+ V++ CAR + + +H M++ ++ N ALVDMYAKC RI +++V
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
F+ + + W + +G GL +A+ VF RM E PD + FV ++ G +
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKL 277
Query: 235 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAG 268
+ R F M + P + + M+ G+ G
Sbjct: 278 KDARLLFGEMSS-----PDVVAWNVMISGHGKRG 306
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 8/274 (2%)
Query: 28 LISTYARCHQPHIAHHVFSRVMDTFSKN------LVIESLMKAGECDIARKVFDKMPVRD 81
L S Y + P A VF R+ D + VI + ++ G+ AR +F +M D
Sbjct: 232 LFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPD 291
Query: 82 VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHG 141
VV WN +I G+ K + F M + V+ T SV++ + L VH
Sbjct: 292 VVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHA 351
Query: 142 LMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALD 201
++ + N + ++LV MY+KC +++ + +VF+ + + WNAMI G A +G +
Sbjct: 352 EAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHK 411
Query: 202 AIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMV 261
+ +F M+ D TF +L C+ + G + +I+ + L + L +V
Sbjct: 412 VMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAK-NLFVGNALV 470
Query: 262 DLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
D+ + G LE+A + + M + D V W ++ +
Sbjct: 471 DMYAKCGALEDARQIFERM-CDRDNVTWNTIIGS 503
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 86/164 (52%), Gaps = 12/164 (7%)
Query: 39 HIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVR-DVVTWNTLIGGYVKNVR 97
H+AH +D + N +I+ K G+ + +VFD+M R +VV+WN+LI GY KN
Sbjct: 760 HLAHD-----LDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814
Query: 98 FLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEK---RVKLNYIL 154
D L++F M + + PD TF V+T C+ G + + + + +M+ + +++++
Sbjct: 815 AEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHV- 873
Query: 155 SAALVDMYAKCGRIDVSKQVFDTV-ARDHVSVWNAMINGLAVHG 197
A +VD+ + G + + + + +W++++ +HG
Sbjct: 874 -ACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHG 916
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 89/191 (46%), Gaps = 15/191 (7%)
Query: 154 LSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVEN 213
L A+VD+YAKC ++ +++ FD + +D V+ WN+M++ + G + F +
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFDFLEKD-VTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ 155
Query: 214 VLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEE 272
+ P+ TF +L C+ V GR+ H +++ + ++ G +VD+ + + +
Sbjct: 156 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMI--KMGLERNSYCGGALVDMYAKCDRISD 213
Query: 273 ACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGD-------FVLLSN 325
A + + + V+P+ V W L S + K L E A+ R+ FV + N
Sbjct: 214 ARRVFEWI-VDPNTVCWTCLFSG---YVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVIN 269
Query: 326 MYCSLKNWHNA 336
Y L +A
Sbjct: 270 TYIRLGKLKDA 280
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/307 (40%), Positives = 186/307 (60%), Gaps = 3/307 (0%)
Query: 57 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 116
+I+ +K D ARK+F+ R+VV W TLI G+ K R ++ LFR ML + P+
Sbjct: 252 IIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPN 311
Query: 117 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 176
T A+++ C+ LG+L + K VHG M+ ++++ + + +DMYA+CG I +++ VFD
Sbjct: 312 QCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFD 371
Query: 177 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 236
+ +V W++MIN ++GL +A+ F +M+ +NV+P+S+TFV +L ACSH G V E
Sbjct: 372 MMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKE 431
Query: 237 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 296
G + F M + + P+ EHY MVDLLGRAG + EA + I MPV+P W ALLSAC
Sbjct: 432 GWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSAC 491
Query: 297 RIHGKKELA-EFA--IANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRG 353
RIH + +LA E A + ++ +S +VLLSN+Y W VR M I G RK G
Sbjct: 492 RIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVG 551
Query: 354 KSWIELG 360
+S E+G
Sbjct: 552 QSATEVG 558
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 152/283 (53%), Gaps = 8/283 (2%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D + ++E + G + A+KVFD++PVR+ V W L+ GY+K + + RLF M
Sbjct: 143 DDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMR 202
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKR-VKLNYILSAALVDMYAKCGRI 168
+ D T +V C + A K VHG+ + + + + L A+++DMY KC +
Sbjct: 203 DTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLL 262
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
D ++++F+T +V +W +I+G A A++A +F +M E++LP+ T IL +C
Sbjct: 263 DNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSC 322
Query: 229 SHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 287
S G + G+ H +++N I+ ++ + +D+ R GN++ A + MP E +V+
Sbjct: 323 SSLGSLRHGKSVHGYMIRNG--IEMDAVNFTSFIDMYARCGNIQMARTVFDMMP-ERNVI 379
Query: 288 IWRALLSACRIHGKKELAEFAIANISRLESGDFVLLSNMYCSL 330
W ++++A I+G L E A+ +++S + V S + SL
Sbjct: 380 SWSSMINAFGING---LFEEALDCFHKMKSQNVVPNSVTFVSL 419
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 129/292 (44%), Gaps = 34/292 (11%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 67
+ HAK+I+HG+ L ++L + Y +++
Sbjct: 25 QVHAKVIIHGFEDEVVLGSSLTNAY-----------------------------IQSNRL 55
Query: 68 DIARKVFDKMPV--RDVVTWNTLIGGYVKNVR--FLDGLRLFRGMLSAEVEPDGFTFASV 123
D A F+++P R+ +WNT++ GY K+ + D L L+ M D F
Sbjct: 56 DFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFA 115
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
+ C LG L N +HGL ++ + + ++ +LV+MYA+ G ++ +++VFD + +
Sbjct: 116 IKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNS 175
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 243
+W ++ G + + +F M + D++T + ++KAC + G+ +
Sbjct: 176 VLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGV 235
Query: 244 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
R I +++D+ + L+ A + + V+ +VV+W L+S
Sbjct: 236 SIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFET-SVDRNVVMWTTLISG 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
MD + I+ + G +AR VFD MP R+V++W+++I + N F + L F M
Sbjct: 345 MDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKM 404
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNA-KWVHGLMLEKRVKLNYILSAALVDMYAKCGR 167
S V P+ TF S+++ C+ G + K + + V A +VD+ + G
Sbjct: 405 KSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGE 464
Query: 168 IDVSKQVFDTVA-RDHVSVWNAMINGLAVH 196
I +K D + + S W A+++ +H
Sbjct: 465 IGEAKSFIDNMPVKPMASAWGALLSACRIH 494
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 199/350 (56%), Gaps = 7/350 (2%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
+DT+ + ++ K G+ + AR+VFD+MP + +V WN+L+ G+ +N + +++F M
Sbjct: 140 LDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQM 199
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
+ EPD TF S+++ CA+ GA+ WVH ++ + + LN L AL+++Y++CG +
Sbjct: 200 RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDV 259
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKA 227
+++VFD + +V+ W AMI+ HG A+ +F++ME + +P+++TFV +L A
Sbjct: 260 GKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSA 319
Query: 228 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 287
C+H GLV EGR + M + + P +EH+ MVD+LGRAG L+EA I +
Sbjct: 320 CAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKAT 379
Query: 288 ---IWRALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRN 341
+W A+L AC++H +L + LE G V+LSN+Y +R+
Sbjct: 380 APALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRD 439
Query: 342 MMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 391
M +RK+ G S IE+ + + F+ D+SH E I+R LE LI R K
Sbjct: 440 GMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCK 489
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 143/300 (47%), Gaps = 35/300 (11%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 67
+ HA LIV GY SL+ LI+ C IA+
Sbjct: 27 QVHAHLIVTGYGRSRSLLTKLITL--ACSARAIAY------------------------- 59
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
+F +P+ D +N++I K L + +R MLS+ V P +TF SV+ C
Sbjct: 60 --THLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSC 117
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 187
A L AL K VH + L+ + AALV Y+KCG ++ ++QVFD + + WN
Sbjct: 118 ADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWN 177
Query: 188 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR-EHFNIMQN 246
++++G +GLA +AI VF +M PDS TFV +L AC+ G V+ G H I+
Sbjct: 178 SLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE 237
Query: 247 RFLIQPQLEHYGT-MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
+ +L GT +++L R G++ +A + M E +V W A++SA HG + A
Sbjct: 238 GLDLNVKL---GTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTHGYGQQA 293
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 98/223 (43%), Gaps = 10/223 (4%)
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
++ +V + + ++V R+ L + VH ++ + L L+ + I
Sbjct: 1 MTTKVAANSAAYEAIVRAGPRVKQL---QQVHAHLIVTGYGRSRSLLTKLITLACSARAI 57
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
+ +F +V ++N++I + L L +A + RM NV P + TF ++K+C
Sbjct: 58 AYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSC 117
Query: 229 SHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 287
+ + G+ H + + + F + ++ +V + G++E A + MP E +V
Sbjct: 118 ADLSALRIGKGVHCHAVVSGFGLDTYVQ--AALVTFYSKCGDMEGARQVFDRMP-EKSIV 174
Query: 288 IWRALLSACRIHGKKELAEFAIANISRLESGDFVLLSNMYCSL 330
W +L+S +G LA+ AI ++ F S + SL
Sbjct: 175 AWNSLVSGFEQNG---LADEAIQVFYQMRESGFEPDSATFVSL 214
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 198/349 (56%), Gaps = 3/349 (0%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
+D + + +++ +K G+ A+ FD +PV D V W T+I G ++N +F M
Sbjct: 550 LDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQM 609
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
V PD FT A++ + L AL + +H L+ + + +LVDMYAKCG I
Sbjct: 610 RLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSI 669
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
D + +F + +++ WNAM+ GLA HG + + +F +M+ + PD +TF+G+L AC
Sbjct: 670 DDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSAC 729
Query: 229 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 288
SH GLV+E +H M + I+P++EHY + D LGRAG +++A N+I++M +E +
Sbjct: 730 SHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASM 789
Query: 289 WRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKI 345
+R LL+ACR+ G E + + LE D +VLLSNMY + W + R MMK
Sbjct: 790 YRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKG 849
Query: 346 GGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
V+K G SWIE+ + IH F D+S+ + + I+R ++ +I+ K +G
Sbjct: 850 HKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEG 898
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 17/272 (6%)
Query: 37 QPHIAHHVFSRVMDTFSKNLVIESL-----MKAGECDIARKVFDKMPVRDVVTWNTLIGG 91
Q H+ + V D+F +I++ MK E R FD +V WN ++ G
Sbjct: 438 QVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFD------LVAWNAMMAG 491
Query: 92 YVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLN 151
Y ++ L+LF M D FT A+V C L A+ K VH ++ L+
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 551
Query: 152 YILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEV 211
+S+ ++DMY KCG + ++ FD++ W MI+G +G A VFS+M +
Sbjct: 552 LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL 611
Query: 212 ENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGT-MVDLLGRAGN 269
VLPD T + KA S + +GR+ H N ++ P GT +VD+ + G+
Sbjct: 612 MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDP---FVGTSLVDMYAKCGS 668
Query: 270 LEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
+++A + K + + ++ W A+L HG+
Sbjct: 669 IDDAYCLFKRIEM-MNITAWNAMLVGLAQHGE 699
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 130/285 (45%), Gaps = 31/285 (10%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N +I K + AR VFD M RD+++WN++I G +N ++ + LF +L ++
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 115 PDGFTFASVVTGCARLG-ALCNAKWVHGLMLEKRVKLNYILSAALVDMYA-----KCGRI 168
PD +T SV+ + L L +K VH ++ + +S AL+D Y+ K I
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
+ FD VA WNAM+ G + +F+ M + D T + K C
Sbjct: 474 LFERHNFDLVA------WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC 527
Query: 229 SHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 287
+N+G++ H +++ + + + ++D+ + G++ A ++PV PD V
Sbjct: 528 GFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPV-PDDV 584
Query: 288 IWRALLSACRIHGKKELA---------------EFAIANISRLES 317
W ++S C +G++E A EF IA +++ S
Sbjct: 585 AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASS 629
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 124/257 (48%), Gaps = 18/257 (7%)
Query: 75 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 134
D V +++ N + Y+ + ++ L+ F M+ ++VE D TF ++ ++ +L
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 135 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLA 194
+ VH + L+ + L +S +L++MY K + ++ VFD ++ + WN++I G+A
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 195 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC--GLVNEGREH-----FNIMQNR 247
+GL ++A+ +F ++ + PD T +LKA S GL + H N + +
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS 452
Query: 248 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA-CRIH-GKKELA 305
F+ ++D R ++EA + + D+V W A+++ + H G K L
Sbjct: 453 FVST-------ALIDAYSRNRCMKEAEILFERHNF--DLVAWNAMMAGYTQSHDGHKTLK 503
Query: 306 EFAIANISRLESGDFVL 322
FA+ + S DF L
Sbjct: 504 LFALMHKQGERSDDFTL 520
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 9/185 (4%)
Query: 44 VFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGY-------VKNV 96
F + F N +I K G AR+VFDKMP RD+V+WN+++ Y V+N+
Sbjct: 67 TFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENI 126
Query: 97 RFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSA 156
+ LFR + V T + ++ C G + ++ HG + + + ++
Sbjct: 127 Q--QAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAG 184
Query: 157 ALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLP 216
ALV++Y K G++ K +F+ + V +WN M+ G +AI + S + P
Sbjct: 185 ALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNP 244
Query: 217 DSITF 221
+ IT
Sbjct: 245 NEITL 249
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 9/176 (5%)
Query: 136 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNAMINGLA 194
K H +L L L+ MY+KCG + +++VFD + RD VS WN+++ A
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVS-WNSILAAYA 116
Query: 195 VHGLAL-----DAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 249
+ A +F + + V +T +LK C H G V E F+ +
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV-WASESFHGYACKIG 175
Query: 250 IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
+ G +V++ + G ++E + + MP DVV+W +L A G KE A
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKAYLEMGFKEEA 230
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/297 (39%), Positives = 181/297 (60%), Gaps = 6/297 (2%)
Query: 53 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 112
S N +I AG A++VFD MPVRDVV+WN ++ Y + + L +F ML
Sbjct: 239 SWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDS 298
Query: 113 VE-PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
E PDGFT SV++ CA LG+L +WVH + + +++ L+ ALVDMY+KCG+ID +
Sbjct: 299 TEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKA 358
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 231
+VF ++ VS WN++I+ L+VHGL DA+ +FS M E P+ ITF+G+L AC+H
Sbjct: 359 LEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHV 418
Query: 232 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 291
G++++ R+ F +M + + ++P +EHYG MVDLLGR G +EEA ++ +P + ++ +
Sbjct: 419 GMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLES 478
Query: 292 LLSACRIHGKKELAEFAIAN----ISRLESGDFVLLSNMYCSLKNWHNAERVRNMMK 344
LL AC+ G+ E AE IAN ++ +S + +SN+Y S W R M+
Sbjct: 479 LLGACKRFGQLEQAE-RIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMR 534
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 120/254 (47%), Gaps = 42/254 (16%)
Query: 48 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 107
V D F +N ++ ++G +IARKV D+MPVRD V+WN+L+ Y++ + LF
Sbjct: 172 VTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDE 231
Query: 108 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 167
M VE W N+++S YA G
Sbjct: 232 MEERNVE----------------------SW------------NFMISG-----YAAAGL 252
Query: 168 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENV-LPDSITFVGILK 226
+ +K+VFD++ V WNAM+ A G + + VF++M ++ PD T V +L
Sbjct: 253 VKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLS 312
Query: 227 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 286
AC+ G +++G E ++ ++ I+ + +VD+ + G +++A + +A + DV
Sbjct: 313 ACASLGSLSQG-EWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATS-KRDV 370
Query: 287 VIWRALLSACRIHG 300
W +++S +HG
Sbjct: 371 STWNSIISDLSVHG 384
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 18/255 (7%)
Query: 50 DTFSKNLVIESLMKAGE---CDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR 106
DTFS + ++ E A + +++ + T N++I Y + L +FR
Sbjct: 70 DTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFR 129
Query: 107 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 166
ML V PD ++F V+ CA + +HGL ++ + + + LV++Y + G
Sbjct: 130 EMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSG 189
Query: 167 RIDVSKQVFDTVA-RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL 225
+++++V D + RD VS WN++++ GL +A A+F ME NV +S F ++
Sbjct: 190 YFEIARKVLDRMPVRDAVS-WNSLLSAYLEKGLVDEARALFDEMEERNV--ESWNF--MI 244
Query: 226 KACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM----P 281
+ GLV E +E F+ M R ++ + MV G E + M
Sbjct: 245 SGYAAAGLVKEAKEVFDSMPVRDVVS-----WNAMVTAYAHVGCYNEVLEVFNKMLDDST 299
Query: 282 VEPDVVIWRALLSAC 296
+PD ++LSAC
Sbjct: 300 EKPDGFTLVSVLSAC 314
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 235 bits (599), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 194/341 (56%), Gaps = 4/341 (1%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N I K+ + AR +FD M R V+W +I GY + + L LF M+ + +
Sbjct: 295 NTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEK 354
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLM-LEKRVKLNYILSAALVDMYAKCGRIDVSKQ 173
PD T S+++GC + G+L KW+ + + N ++ AL+DMY+KCG I ++
Sbjct: 355 PDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARD 414
Query: 174 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 233
+FD V W MI G A++G+ L+A+ +FS+M + P+ ITF+ +L+AC+H G
Sbjct: 415 IFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGS 474
Query: 234 VNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
+ +G E+F+IM+ + I P L+HY MVDLLGR G LEEA +I+ M +PD IW ALL
Sbjct: 475 LEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALL 534
Query: 294 SACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRK 350
+AC+IH ++AE A ++ LE + +V ++N+Y + W R+R++MK ++K
Sbjct: 535 NACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKK 594
Query: 351 KRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 391
G+S I++ H F + H E + I+ L GL AK
Sbjct: 595 YPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLSLFAK 635
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 143/335 (42%), Gaps = 50/335 (14%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D F ++ +K D A KVF++MP RD TWN ++ G+ ++ LFR M
Sbjct: 86 DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR 145
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
E+ PD T +++ + +L + +H + + V + ++ + Y KCG +D
Sbjct: 146 LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLD 205
Query: 170 VSKQVFDTVARDHVSV--WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
+K VF+ + R +V WN+M +V G A DA ++ M E PD TF+ + +
Sbjct: 206 SAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAAS 265
Query: 228 CSHCGLVNEGR---EH--------------------------------FNIMQNRFLIQP 252
C + + +GR H F+IM +R +
Sbjct: 266 CQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVS- 324
Query: 253 QLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSACRIHGKKELAEF-- 307
+ M+ G+++EA + AM +PD+V +L+S C G E ++
Sbjct: 325 ----WTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWID 380
Query: 308 AIANISRLESGDFVL---LSNMYCSLKNWHNAERV 339
A A+I + + ++ L +MY + H A +
Sbjct: 381 ARADIYGCKRDNVMICNALIDMYSKCGSIHEARDI 415
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 112/234 (47%), Gaps = 2/234 (0%)
Query: 69 IARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCA 128
I R+++ + V WN I V ++ L LFR M EP+ FTF V CA
Sbjct: 4 IHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACA 63
Query: 129 RLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNA 188
RL + + VH +++ + + A VDM+ KC +D + +VF+ + + WNA
Sbjct: 64 RLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNA 123
Query: 189 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 248
M++G G A ++F M + + PDS+T + ++++ S + + E + + R
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSL-KLLEAMHAVGIRL 182
Query: 249 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV-EPDVVIWRALLSACRIHGK 301
+ Q+ T + G+ G+L+ A + +A+ + VV W ++ A + G+
Sbjct: 183 GVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGE 236
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 33/173 (19%)
Query: 27 ALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWN 86
ALI Y++C H AR +FD P + VVTW
Sbjct: 398 ALIDMYSKCGSIH-----------------------------EARDIFDNTPEKTVVTWT 428
Query: 87 TLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEK 146
T+I GY N FL+ L+LF M+ + +P+ TF +V+ CA G+L W + ++++
Sbjct: 429 TMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSL-EKGWEYFHIMKQ 487
Query: 147 RVKLNYILS--AALVDMYAKCGRIDVSKQVF-DTVARDHVSVWNAMINGLAVH 196
++ L + +VD+ + G+++ + ++ + A+ +W A++N +H
Sbjct: 488 VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIH 540
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 234 bits (597), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 195/349 (55%), Gaps = 3/349 (0%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
+D + N +I+ K + D A K+F ++ ++ V+WNT+I GY +FR
Sbjct: 381 LDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREA 440
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
L +V TF+S + CA L ++ VHGL ++ +S +L+DMYAKCG I
Sbjct: 441 LRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDI 500
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
++ VF+ + V+ WNA+I+G + HGL A+ + M+ + P+ +TF+G+L C
Sbjct: 501 KFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGC 560
Query: 229 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 288
S+ GL+++G+E F M I+P LEHY MV LLGR+G L++A +I+ +P EP V+I
Sbjct: 561 SNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMI 620
Query: 289 WRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKI 345
WRA+LSA +E A + I ++ D +VL+SNMY K W N +R MK
Sbjct: 621 WRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKE 680
Query: 346 GGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
GV+K+ G SWIE +H F+ H +MK I+ +LE L +A G
Sbjct: 681 MGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAG 729
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 122/246 (49%), Gaps = 6/246 (2%)
Query: 57 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 116
+++ + G+ A KVF++MP DVV W+ +I + +N + + LF M A V P+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 117 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 176
FT +S++ GCA + +HGL+++ L+ +S AL+D+YAKC ++D + ++F
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 177 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 236
++ + WN +I G G A ++F V +TF L AC+ ++
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467
Query: 237 GRE--HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 294
G + I N ++ +++D+ + G+++ A ++ M DV W AL+S
Sbjct: 468 GVQVHGLAIKTNN---AKKVAVSNSLIDMYAKCGDIKFAQSVFNEMET-IDVASWNALIS 523
Query: 295 ACRIHG 300
HG
Sbjct: 524 GYSTHG 529
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 107/226 (47%), Gaps = 6/226 (2%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMK 63
+++L G+ P + + + + + I + S ++ + F +I +
Sbjct: 134 YSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSV 193
Query: 64 AGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 123
G D AR VF+ + +D+V W ++ YV+N F D L+L M A P+ +TF +
Sbjct: 194 CGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTA 253
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
+ LGA AK VHG +L+ L+ + L+ +Y + G + + +VF+ + ++ V
Sbjct: 254 LKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDV 313
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
W+ MI +G +A+ +F RM V+P+ T IL C+
Sbjct: 314 VPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 122/247 (49%), Gaps = 8/247 (3%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
+D F+ N+++ + +KAG A +FD+MP R+ V++ TL GY D + L+ +
Sbjct: 82 LDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQ----DPIGLYSRL 137
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
E + F S + L W+H +++ N + AAL++ Y+ CG +
Sbjct: 138 HREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSV 197
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
D ++ VF+ + + VW +++ +G D++ + S M + +P++ TF LKA
Sbjct: 198 DSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKAS 257
Query: 229 SHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 287
G + + H I++ +++ P++ ++ L + G++ +A + MP + DVV
Sbjct: 258 IGLGAFDFAKGVHGQILKTCYVLDPRVGV--GLLQLYTQLGDMSDAFKVFNEMP-KNDVV 314
Query: 288 IWRALLS 294
W +++
Sbjct: 315 PWSFMIA 321
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 234 bits (597), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 139/362 (38%), Positives = 207/362 (57%), Gaps = 9/362 (2%)
Query: 3 STTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVF-SRVMDTF-SKNLVIES 60
S+ + H ++ G+ Y L A +I YA + +A F + V D S+N +I
Sbjct: 321 SSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAG 380
Query: 61 LMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA-EVEPDGFT 119
+K G + AR+VFD+ +D+ +WN +I GY +++ L LFR M+S+ +V+PD T
Sbjct: 381 FVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAIT 440
Query: 120 FASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF---D 176
SV + + LG+L K H + + N L+AA++DMYAKCG I+ + +F
Sbjct: 441 MVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTK 500
Query: 177 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 236
++ +S WNA+I G A HG A A+ ++S ++ + P+SITFVG+L AC H GLV
Sbjct: 501 NISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVEL 560
Query: 237 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 296
G+ +F M++ I+P ++HYG MVDLLG+AG LEEA MIK MPV+ DV+IW LLSA
Sbjct: 561 GKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSAS 620
Query: 297 RIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRG 353
R HG E+AE A ++ ++ G V+LSN+Y W + VR M+ V R
Sbjct: 621 RTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRA 680
Query: 354 KS 355
S
Sbjct: 681 FS 682
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 120/227 (52%), Gaps = 2/227 (0%)
Query: 2 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIE 59
D T + H +++ G + + ++++ YA+C A VF +D+ S N++++
Sbjct: 56 DVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVD 115
Query: 60 SLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFT 119
+++ A K+FD MP R V++ TLI GY +N ++ + + LFR M + + + T
Sbjct: 116 GYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVT 175
Query: 120 FASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA 179
A+V++ C+ LG + + + + L ++ +++ +S L+ MY C + ++++FD +
Sbjct: 176 LATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP 235
Query: 180 RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 226
++ WN M+NG + GL A +F ++ ++++ G L+
Sbjct: 236 ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLR 282
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 124/289 (42%), Gaps = 43/289 (14%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N+++ KAG + A ++FD++ +D+V+W T+I G ++ + + L + ML ++
Sbjct: 243 NVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMK 302
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
P +++ AR +HG ++++ L A ++ YA I ++ Q
Sbjct: 303 PSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQ 362
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL------------------- 215
F+ +DH++ NA+I G +G+ A VF + +++
Sbjct: 363 FEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLAL 422
Query: 216 -------------PDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVD 262
PD+IT V + A S G + EG+ + + N I P ++D
Sbjct: 423 HLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL-NFSTIPPNDNLTAAIID 481
Query: 263 LLGRAGNLEEACNM------IKAMPVEPDVVIWRALLSACRIHGKKELA 305
+ + G++E A N+ I + + P W A++ HG +LA
Sbjct: 482 MYAKCGSIETALNIFHQTKNISSSTISP----WNAIICGSATHGHAKLA 526
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 207/386 (53%), Gaps = 7/386 (1%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFS--RVMDTFSKNLVIESLMKAG 65
+ H IV YA + ++L+ YA+C + A VF RV +T S ++ K+G
Sbjct: 126 QVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSG 185
Query: 66 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEP-DGFTFASVV 124
+ A ++F +PV+++ +W LI G+V++ + L+ +F M V+ D +S+V
Sbjct: 186 RKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIV 245
Query: 125 TGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS 184
CA L A + VHGL++ +S AL+DMYAKC + +K +F + V
Sbjct: 246 GACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVV 305
Query: 185 VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIM 244
W ++I G+A HG A A+A++ M V P+ +TFVG++ ACSH G V +GRE F M
Sbjct: 306 SWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSM 365
Query: 245 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKEL 304
+ I+P L+HY ++DLLGR+G L+EA N+I MP PD W ALLSAC+ G+ ++
Sbjct: 366 TKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQM 425
Query: 305 ----AEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELG 360
A+ +++ + ++LLSN+Y S W R + VRK G S +E+
Sbjct: 426 GIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVR 485
Query: 361 DSIHQFNAADQSHAEMKAIHRVLEGL 386
F A + SH + I R+L+ L
Sbjct: 486 KETEVFYAGETSHPLKEDIFRLLKKL 511
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 97/193 (50%), Gaps = 12/193 (6%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-- 112
N ++ K G A +VFD+MP RD + W +++ N L G L
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTAL--NQANLSGKTLSVFSSVGSSS 99
Query: 113 -VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
+ PD F F+++V CA LG++ + + VH + + ++ ++LVDMYAKCG ++ +
Sbjct: 100 GLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSA 159
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 231
K VFD++ + W AM++G A G +A+ +F + V+N+ + G +++
Sbjct: 160 KAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQS---- 215
Query: 232 GLVNEGREHFNIM 244
+G E F++
Sbjct: 216 ---GKGLEAFSVF 225
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 102/196 (52%), Gaps = 9/196 (4%)
Query: 127 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSV 185
CAR L AK +H +++ + L+ LV++Y KCG + QVFD + RDH++
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIA- 71
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVL-PDSITFVGILKACSHCGLVNEGRE-HFNI 243
W +++ L L+ ++VFS + + L PD F ++KAC++ G ++ GR+ H +
Sbjct: 72 WASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHF 131
Query: 244 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 303
+ + + ++ ++VD+ + G L A + ++ V+ + + W A++S G+KE
Sbjct: 132 IVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAKSGRKE 188
Query: 304 --LAEFAIANISRLES 317
L F I + L S
Sbjct: 189 EALELFRILPVKNLYS 204
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/333 (35%), Positives = 198/333 (59%), Gaps = 4/333 (1%)
Query: 64 AGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 123
G + A +F+ + +D+++WN++I G+ + D ++ F + S+E++ D + F+++
Sbjct: 355 TGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSAL 414
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
+ C+ L L + +H L + N + ++L+ MY+KCG I+ +++ F ++ H
Sbjct: 415 LRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHS 474
Query: 184 SV-WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
+V WNAMI G A HGL ++ +FS+M +NV D +TF IL ACSH GL+ EG E N
Sbjct: 475 TVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLN 534
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 302
+M+ + IQP++EHY VDLLGRAG + +A +I++MP+ PD ++ + L CR G+
Sbjct: 535 LMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEI 594
Query: 303 ELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIEL 359
E+A ++ +E D +V LS+MY LK W V+ MMK GV+K G SWIE+
Sbjct: 595 EMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEI 654
Query: 360 GDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKF 392
+ + FNA D+S+ + I+ +++ L Q ++
Sbjct: 655 RNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQW 687
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 128/260 (49%), Gaps = 4/260 (1%)
Query: 48 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 107
+ D + N +++S +K G A +FD+MP RD V+WNT+I GY + D LF
Sbjct: 32 ISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTC 91
Query: 108 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 167
M + + DG++F+ ++ G A + + VHGL+++ + N + ++LVDMYAKC R
Sbjct: 92 MKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCER 151
Query: 168 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILK 226
++ + + F ++ + WNA+I G A + ME++ V D+ TF +L
Sbjct: 152 VEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLT 211
Query: 227 ACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 285
N ++ H ++ + +Q ++ M+ G++ +A + + D
Sbjct: 212 LLDDPMFCNLLKQVHAKVL--KLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKD 269
Query: 286 VVIWRALLSACRIHGKKELA 305
++ W ++++ H KE A
Sbjct: 270 LISWNSMIAGFSKHELKESA 289
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 147/325 (45%), Gaps = 56/325 (17%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 67
+ H +I GY + ++L+ YA+C RV D F
Sbjct: 122 QVHGLVIKGGYECNVYVGSSLVDMYAKCE----------RVEDAF--------------- 156
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS--AEVEPDGFTFASVVT 125
+ F ++ + V+WN LI G+V+ VR + G++ A V D TFA ++T
Sbjct: 157 ----EAFKEISEPNSVSWNALIAGFVQ-VRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLT 211
Query: 126 GCARLGALCNA-KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV--ARDH 182
CN K VH +L+ ++ + A++ YA CG + +K+VFD + ++D
Sbjct: 212 -LLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDL 270
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREH-- 240
+S WN+MI G + H L A +F +M+ V D T+ G+L ACS G EH
Sbjct: 271 IS-WNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS-------GEEHQI 322
Query: 241 FNIMQNRFLIQPQLEHYGTMVDLL------GRAGNLEEACNMIKAMPVEPDVVIWRALLS 294
F + +I+ LE + + L G +E+A ++ +++ D++ W ++++
Sbjct: 323 FGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLK-SKDLISWNSIIT 381
Query: 295 ACRIHGKKELAEFAIANISRLESGD 319
+K L+E A+ S L S +
Sbjct: 382 G---FAQKGLSEDAVKFFSYLRSSE 403
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 192/342 (56%), Gaps = 4/342 (1%)
Query: 57 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 116
VI+ K G ++A ++F+++ RD+V+WN++I ++ + +FR M + + D
Sbjct: 482 VIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYD 541
Query: 117 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 176
+ ++ ++ CA L + K +HG M++ + + + L+DMYAKCG + + VF
Sbjct: 542 CVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFK 601
Query: 177 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRM-EVENVLPDSITFVGILKACSHCGLVN 235
T+ ++ WN++I HG D++ +F M E + PD ITF+ I+ +C H G V+
Sbjct: 602 TMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVD 661
Query: 236 EGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
EG F M + IQPQ EHY +VDL GRAG L EA +K+MP PD +W LL A
Sbjct: 662 EGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGA 721
Query: 296 CRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKR 352
CR+H ELAE A + + L+ SG +VL+SN + + + W + +VR++MK V+K
Sbjct: 722 CRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIP 781
Query: 353 GKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
G SWIE+ H F + D +H E I+ +L L+ + +G
Sbjct: 782 GYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEG 823
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 147/288 (51%), Gaps = 12/288 (4%)
Query: 20 TYPSLVAAL--ISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKM 77
T+ SL+ ++ C Q H S +D F + +I++ K +A+ +F +
Sbjct: 342 TFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQC 401
Query: 78 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 137
DVV + +I GY+ N ++D L +FR ++ ++ P+ T S++ L AL +
Sbjct: 402 NSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGR 461
Query: 138 WVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHG 197
+HG +++K + A++DMYAKCGR++++ ++F+ +++ + WN+MI A
Sbjct: 462 ELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSD 521
Query: 198 LALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLE-- 255
AI +F +M V + D ++ L AC+ N E F + F+I+ L
Sbjct: 522 NPSAAIDIFRQMGVSGICYDCVSISAALSACA-----NLPSESFGKAIHGFMIKHSLASD 576
Query: 256 --HYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
T++D+ + GNL+ A N+ K M E ++V W ++++AC HGK
Sbjct: 577 VYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGK 623
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 124/244 (50%), Gaps = 4/244 (1%)
Query: 54 KNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV 113
KN ++ K G D A K+F M D VTWN +I GYV++ + L F M+S+ V
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 114 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 173
PD TF+S++ ++ L K +H ++ + L+ L++AL+D Y KC + +++
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQN 396
Query: 174 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 233
+F V V+ AMI+G +GL +D++ +F + + P+ IT V IL
Sbjct: 397 IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLA 456
Query: 234 VNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 292
+ GRE H I++ F + ++D+ + G + A + + + + D+V W ++
Sbjct: 457 LKLGRELHGFIIKKGF--DNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSM 513
Query: 293 LSAC 296
++ C
Sbjct: 514 ITRC 517
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 138/285 (48%), Gaps = 16/285 (5%)
Query: 19 ATYPSLVAALISTYARCHQPHIAHHVFSRVMDT--FSKNLVIESLMKAGECDIARKVFDK 76
+T+P LV A ++ ++ V S MD F + +I++ ++ G+ D+ K+FD+
Sbjct: 139 STFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDR 198
Query: 77 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA 136
+ +D V WN ++ GY K ++ F M ++ P+ TF V++ CA +
Sbjct: 199 VLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLG 258
Query: 137 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 196
+HGL++ V + +L+ MY+KCGR D + ++F ++R WN MI+G
Sbjct: 259 VQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQS 318
Query: 197 GLALDAIAVFSRMEVENVLPDSITFVGILKACS------HCGLVNEGREHFNIMQNRFLI 250
GL +++ F M VLPD+ITF +L + S +C ++ +I + FL
Sbjct: 319 GLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLT 378
Query: 251 QPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
++ Y + A N+ CN + DVV++ A++S
Sbjct: 379 SALIDAYFKCRG-VSMAQNIFSQCNSV-------DVVVFTAMISG 415
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 136/297 (45%), Gaps = 7/297 (2%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVR--DVVTWNTLIGGYVKNVRFLDGLRLFRG 107
D+++ ++ G K+F ++ +R + WN++I +V+N L +
Sbjct: 69 DSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFK 128
Query: 108 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 167
ML V PD TF +V C L ++ + + N ++++L+ Y + G+
Sbjct: 129 MLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGK 188
Query: 168 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
IDV ++FD V + +WN M+NG A G I FS M ++ + P+++TF +L
Sbjct: 189 IDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSV 248
Query: 228 CSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 286
C+ L++ G + H ++ + + +++ +++ + + G ++A + + M D
Sbjct: 249 CASKLLIDLGVQLHGLVVVSGVDFEGSIKN--SLLSMYSKCGRFDDASKLFRMMS-RADT 305
Query: 287 VIWRALLSACRIHG-KKELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNM 342
V W ++S G +E F IS D + S++ S+ + N E + +
Sbjct: 306 VTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQI 362
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D +S++ +I+ K G A VF M +++V+WN++I + + D L LF M+
Sbjct: 576 DVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMV 635
Query: 110 SAE-VEPDGFTFASVVTGCARLGALCNA-KWVHGLMLEKRVKLNYILSAALVDMYAKCGR 167
+ PD TF +++ C +G + ++ + + ++ A +VD++ + GR
Sbjct: 636 EKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGR 695
Query: 168 IDVSKQVFDTVAR----DHVSVWNAMINGLAVH 196
+ + ++TV VW ++ +H
Sbjct: 696 L---TEAYETVKSMPFPPDAGVWGTLLGACRLH 725
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD--TVAR 180
++ C+ L K VH ++ + + ++ MYA CG ++F + R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 181 DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
+ WN++I+ +GL A+A + +M V PD TF ++KAC
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 231 bits (590), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 121/340 (35%), Positives = 200/340 (58%), Gaps = 4/340 (1%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D F + +++ K GE ARK+FD+MP R+VVTW+ ++ GY + + L LF+ L
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
+ + ++F+SV++ CA L + +HGL ++ + + ++LV +Y+KCG +
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 170 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
+ QVF+ V ++ +WNAM+ A H I +F RM++ + P+ ITF+ +L ACS
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 230 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 289
H GLV+EGR +F+ M+ I+P +HY ++VD+LGRAG L+EA +I MP++P +W
Sbjct: 330 HAGLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVW 388
Query: 290 RALLSACRIHGKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMKIG 346
ALL++C +H ELA FA + L SG + LSN Y + + +A + R +++
Sbjct: 389 GALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDR 448
Query: 347 GVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGL 386
G +K+ G SW+E + +H F A ++ H + K I+ L L
Sbjct: 449 GEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAEL 488
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 111/230 (48%), Gaps = 2/230 (0%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
+R+ F+ P + TW+++I + +N L + M++ + PD S CA
Sbjct: 69 SRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAI 128
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 189
L + VH L ++ + + ++LVDMYAKCG I ++++FD + + +V W+ M
Sbjct: 129 LSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGM 188
Query: 190 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 249
+ G A G +A+ +F EN+ + +F ++ C++ L+ GR+ + + +
Sbjct: 189 MYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQ-IHGLSIKSS 247
Query: 250 IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIH 299
++V L + G E A + +PV+ ++ IW A+L A H
Sbjct: 248 FDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQH 296
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 30/170 (17%)
Query: 28 LISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNT 87
L+S Y++C P A+ VF+ V PV+++ WN
Sbjct: 258 LVSLYSKCGVPEGAYQVFNEV-----------------------------PVKNLGIWNA 288
Query: 88 LIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKR 147
++ Y ++ + LF+ M + ++P+ TF +V+ C+ G + ++ M E R
Sbjct: 289 MLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESR 348
Query: 148 VKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV-SVWNAMINGLAVH 196
++ A+LVDM + GR+ + +V + D SVW A++ VH
Sbjct: 349 IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVH 398
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 231 bits (589), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 185/341 (54%), Gaps = 3/341 (0%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
+D N +I+ K GE + K+F M D VTWNT+I V+ F GL++ M
Sbjct: 441 IDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQM 500
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
+EV PD TF + CA L A K +H +L + + AL++MY+KCG +
Sbjct: 501 RKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCL 560
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
+ S +VF+ ++R V W MI ++G A+ F+ ME ++PDS+ F+ I+ AC
Sbjct: 561 ENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYAC 620
Query: 229 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 288
SH GLV+EG F M+ + I P +EHY +VDLL R+ + +A I+AMP++PD I
Sbjct: 621 SHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASI 680
Query: 289 WRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKI 345
W ++L ACR G E AE I L D +L SN Y +L+ W +R +K
Sbjct: 681 WASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKD 740
Query: 346 GGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGL 386
+ K G SWIE+G ++H F++ D S + +AI++ LE L
Sbjct: 741 KHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEIL 781
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 142/268 (52%), Gaps = 4/268 (1%)
Query: 48 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 107
V+++ +N++I+ K G+ AR VF+ M +D V+WN++I GY+++ ++ ++LF+
Sbjct: 339 VLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKM 398
Query: 108 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 167
M+ E + D T+ +++ RL L K +H ++ + ++ +S AL+DMYAKCG
Sbjct: 399 MMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGE 458
Query: 168 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
+ S ++F ++ WN +I+ G + V ++M V+PD TF+ L
Sbjct: 459 VGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPM 518
Query: 228 CSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 286
C+ G+E H ++ RF + +L+ ++++ + G LE + + + M DV
Sbjct: 519 CASLAAKRLGKEIHCCLL--RFGYESELQIGNALIEMYSKCGCLENSSRVFERMS-RRDV 575
Query: 287 VIWRALLSACRIHGKKELAEFAIANISR 314
V W ++ A ++G+ E A A++ +
Sbjct: 576 VTWTGMIYAYGMYGEGEKALETFADMEK 603
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 150/287 (52%), Gaps = 23/287 (8%)
Query: 20 TYPSLVAALISTYARCHQPHIAHHVFSRVMDT------FSKNLVIESLMKAGECDIARKV 73
T+PS++ A + + V+ +++D F N +++ + G AR+V
Sbjct: 108 TFPSVIKACAGLF----DAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQV 163
Query: 74 FDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGAL 133
FD+MPVRD+V+WN+LI GY + + + L ++ + ++ + PD FT +SV+ L +
Sbjct: 164 FDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVV 223
Query: 134 CNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-ARDHVSVWNAMING 192
+ +HG L+ V +++ LV MY K R +++VFD + RD VS +N MI G
Sbjct: 224 KQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVS-YNTMICG 282
Query: 193 LAVHGLALDAIAVFSRMEVENV---LPDSITFVGILKACSHCGLVNEGREHFNIM-QNRF 248
L L+ + RM +EN+ PD +T +L+AC H ++ + +N M + F
Sbjct: 283 Y----LKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGF 338
Query: 249 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
+++ + + ++D+ + G++ A ++ +M + D V W +++S
Sbjct: 339 VLESTVRN--ILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISG 382
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 125/229 (54%), Gaps = 7/229 (3%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
AR+VFD+M VRD V++NT+I GY+K + +R+F L + +PD T +SV+ C
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGH 319
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-ARDHVSVWNA 188
L L AK+++ ML+ L + L+D+YAKCG + ++ VF+++ +D VS WN+
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS-WNS 378
Query: 189 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNR 247
+I+G G ++A+ +F M + D IT++ ++ + + G+ H N +++
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG 438
Query: 248 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 296
I L ++D+ + G + ++ + +M D V W ++SAC
Sbjct: 439 ICI--DLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVISAC 484
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 30/232 (12%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 67
+ HA +I G + LI Y+ +P + VF RV
Sbjct: 25 RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS------------------ 66
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
P ++V WN++I + KN F + L + + ++V PD +TF SV+ C
Sbjct: 67 ----------PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC 116
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVW 186
A L V+ +L+ + + + ALVDMY++ G + ++QVFD + RD VS W
Sbjct: 117 AGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVS-W 175
Query: 187 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR 238
N++I+G + HG +A+ ++ ++ ++PDS T +L A + +V +G+
Sbjct: 176 NSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 139 VHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR-DHVSVWNAMINGLAVHG 197
+H L++ + + S L+D Y+ S VF V+ +V +WN++I + +G
Sbjct: 26 IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG 85
Query: 198 LALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL---IQPQL 254
L +A+ + ++ V PD TF ++KAC+ GL + E +++ + L + L
Sbjct: 86 LFPEALEFYGKLRESKVSPDKYTFPSVIKACA--GLFDA--EMGDLVYEQILDMGFESDL 141
Query: 255 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
+VD+ R G L A + MPV D+V W +L+S HG E A
Sbjct: 142 FVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISGYSSHGYYEEA 191
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 231 bits (589), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 128/325 (39%), Positives = 183/325 (56%), Gaps = 3/325 (0%)
Query: 52 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 111
F+ +++ KAG ARK FD + RDV W +LI GYV+N + L L+R M +A
Sbjct: 358 FATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTA 417
Query: 112 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
+ P+ T ASV+ C+ L L K VHG ++ L + +AL MY+KCG ++
Sbjct: 418 GIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDG 477
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 231
VF V WNAMI+GL+ +G +A+ +F M E + PD +TFV I+ ACSH
Sbjct: 478 NLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHK 537
Query: 232 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 291
G V G +FN+M ++ + P+++HY MVDLL RAG L+EA I++ ++ + +WR
Sbjct: 538 GFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRI 597
Query: 292 LLSACRIHGKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGV 348
LLSAC+ HGK EL +A + L ES +V LS +Y +L + ERV M+ GV
Sbjct: 598 LLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGV 657
Query: 349 RKKRGKSWIELGDSIHQFNAADQSH 373
K+ G SWIEL + H F D H
Sbjct: 658 SKEVGCSWIELKNQYHVFVVGDTMH 682
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 149/299 (49%), Gaps = 33/299 (11%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 67
+ H I +G + +L AL++ Y++C ESL +A C
Sbjct: 242 QIHCITIKNGLLGFVALSNALVTMYSKC-----------------------ESLNEA--C 276
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
K+FD R+ +TW+ ++ GY +N L+ ++LF M SA ++P +T V+ C
Sbjct: 277 ----KMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 187
+ + L K +H +L+ + + + ALVDMYAK G + +++ FD + V++W
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWT 392
Query: 188 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQN 246
++I+G + +A+ ++ RM+ ++P+ T +LKACS + G++ H + +++
Sbjct: 393 SLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKH 452
Query: 247 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
F ++ + + + + G+LE+ + + P DVV W A++S +G+ + A
Sbjct: 453 GFGLEVPIG--SALSTMYSKCGSLEDGNLVFRRTP-NKDVVSWNAMISGLSHNGQGDEA 508
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 16/263 (6%)
Query: 43 HVFSRVMDTFSKNLVIESLM----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRF 98
H M +F V SL+ KAG + KVF MP R+ TW+T++ GY R
Sbjct: 141 HALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRV 200
Query: 99 LDGLRLFRGMLSAEVE--PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSA 156
+ +++F L + E + F +V++ A + + +H + ++ + LS
Sbjct: 201 EEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSN 260
Query: 157 ALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLP 216
ALV MY+KC ++ + ++FD+ + W+AM+ G + +G +L+A+ +FSRM + P
Sbjct: 261 ALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKP 320
Query: 217 DSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHY----GTMVDLLGRAGNLEE 272
T VG+L ACS + EG++ + FL++ E + +VD+ +AG L +
Sbjct: 321 SEYTIVGVLNACSDICYLEEGKQ-----LHSFLLKLGFERHLFATTALVDMYAKAGCLAD 375
Query: 273 ACNMIKAMPVEPDVVIWRALLSA 295
A + E DV +W +L+S
Sbjct: 376 ARKGFDCLQ-ERDVALWTSLISG 397
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 120/253 (47%), Gaps = 9/253 (3%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDG---LRLFRGMLSA 111
N+++ K G+ A +F+ + +DVV+WN+LI GY +N ++LFR M +
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 112 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
++ P+ +T A + + L + + H L+++ + + +LV MY K G ++
Sbjct: 113 DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDG 172
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM--EVENVLPDSITFVGILKACS 229
+VF + + W+ M++G A G +AI VF+ E E F +L + +
Sbjct: 173 LKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLA 232
Query: 230 HCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 288
V GR+ H ++N L L + +V + + +L EAC M + + + +
Sbjct: 233 ATIYVGLGRQIHCITIKNGLLGFVALSN--ALVTMYSKCESLNEACKMFDSSG-DRNSIT 289
Query: 289 WRALLSACRIHGK 301
W A+++ +G+
Sbjct: 290 WSAMVTGYSQNGE 302
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 231 bits (589), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 182/321 (56%), Gaps = 3/321 (0%)
Query: 64 AGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 123
+G+ A +F + +RD++ WN +I GYV+ +GL ++ M + PD +TFASV
Sbjct: 156 SGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASV 215
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
C+ L L + K H +M+++ +K N I+ +ALVDMY KC +VFD ++ +V
Sbjct: 216 FRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNV 275
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 243
W ++I+G HG + + F +M+ E P+ +TF+ +L AC+H GLV++G EHF
Sbjct: 276 ITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYS 335
Query: 244 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 303
M+ + I+P+ +HY MVD LGRAG L+EA + P + +W +LL ACRIHG +
Sbjct: 336 MKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVK 395
Query: 304 LAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELG 360
L E A L+ G++V+ +N Y S A +VR M+ GV+K G S IEL
Sbjct: 396 LLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQ 455
Query: 361 DSIHQFNAADQSHAEMKAIHR 381
+H+F D SH + I++
Sbjct: 456 GEVHRFMKDDTSHRLSEKIYK 476
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 4/190 (2%)
Query: 112 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
+VEP+ T+A ++ C + K +H M LN L L+ +YA G + +
Sbjct: 105 QVEPE--TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 231
+F ++ + WNAMI+G GL + + ++ M ++PD TF + +ACS
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSAL 222
Query: 232 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 291
+ G+ +M R I+ + +VD+ + + + + + +V+ W +
Sbjct: 223 DRLEHGKRAHAVMIKR-CIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR-NVITWTS 280
Query: 292 LLSACRIHGK 301
L+S HGK
Sbjct: 281 LISGYGYHGK 290
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 231 bits (588), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 123/336 (36%), Positives = 198/336 (58%), Gaps = 7/336 (2%)
Query: 62 MKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 121
MK GE A +F+ M V+D+V WN + V+ L F M + V+ D FT
Sbjct: 155 MKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVV 214
Query: 122 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 181
S+++ C +LG+L + ++ ++ + N I+ A +DM+ KCG + ++ +F+ + +
Sbjct: 215 SMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQR 274
Query: 182 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 241
+V W+ MI G A++G + +A+ +F+ M+ E + P+ +TF+G+L ACSH GLVNEG+ +F
Sbjct: 275 NVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYF 334
Query: 242 NIM--QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIH 299
++M N ++P+ EHY MVDLLGR+G LEEA IK MPVEPD IW ALL AC +H
Sbjct: 335 SLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
Query: 300 GKKELAEFAIANISRLESGDF----VLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKS 355
L + +A++ + D VLLSN+Y + W ++VR+ M+ G +K S
Sbjct: 395 RDMILGQ-KVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYS 453
Query: 356 WIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 391
+E IH FN D+SH + KAI+ L+ ++++ +
Sbjct: 454 SVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIR 489
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 119/244 (48%), Gaps = 2/244 (0%)
Query: 57 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 116
++E+L+ G+ AR+VFD+M + WNTL GYV+N + L L++ M V PD
Sbjct: 49 LLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPD 108
Query: 117 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 176
FT+ VV ++LG +H +++ I++ LV MY K G + ++ +F+
Sbjct: 109 EFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFE 168
Query: 177 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 236
++ + WNA + G + A+ F++M + V DS T V +L AC G +
Sbjct: 169 SMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEI 228
Query: 237 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 296
G E ++ + I + +D+ + GN E A + + M + +VV W ++
Sbjct: 229 GEEIYDRARKE-EIDCNIIVENARLDMHLKCGNTEAARVLFEEMK-QRNVVSWSTMIVGY 286
Query: 297 RIHG 300
++G
Sbjct: 287 AMNG 290
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 10/182 (5%)
Query: 25 VAALISTYARCHQPHIAHHVFSRV-MDTFSKNLVIESL-----MKAGECDIARKVFDKMP 78
V +++S + I ++ R + N+++E+ +K G + AR +F++M
Sbjct: 213 VVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMK 272
Query: 79 VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKW 138
R+VV+W+T+I GY N + L LF M + + P+ TF V++ C+ G + K
Sbjct: 273 QRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKR 332
Query: 139 VHGLMLE---KRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNAMINGLA 194
LM++ K ++ A +VD+ + G ++ + + + +W A++ A
Sbjct: 333 YFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACA 392
Query: 195 VH 196
VH
Sbjct: 393 VH 394
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 20/178 (11%)
Query: 137 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 196
K +H ++L L L++ G + ++QVFD + + + +WN + G +
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 197 GLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEH 256
L +++ ++ +M V PD T+ ++KA S G + G F + +
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCG----------FALHAHVVK 137
Query: 257 YG---------TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
YG +V + + G L A + ++M V+ D+V W A L+ C G +A
Sbjct: 138 YGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVK-DLVAWNAFLAVCVQTGNSAIA 194
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 231 bits (588), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 195/345 (56%), Gaps = 3/345 (0%)
Query: 48 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 107
++DT +N +++ K A +VF+ + +DVV+W ++I N + + LFR
Sbjct: 518 LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRR 577
Query: 108 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 167
M+ + D +++ A L AL + +H +L K L ++ A+VDMYA CG
Sbjct: 578 MVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGD 637
Query: 168 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
+ +K VFD + R + + +MIN +HG A+ +F +M ENV PD I+F+ +L A
Sbjct: 638 LQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYA 697
Query: 228 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 287
CSH GL++EGR IM++ + ++P EHY +VD+LGRA + EA +K M EP
Sbjct: 698 CSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAE 757
Query: 288 IWRALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMK 344
+W ALL+ACR H +KE+ E A + LE G+ VL+SN++ W++ E+VR MK
Sbjct: 758 VWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMK 817
Query: 345 IGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQR 389
G+ K G SWIE+ +H+F A D+SH E K I+ L + ++
Sbjct: 818 ASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRK 862
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 116/237 (48%), Gaps = 12/237 (5%)
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
K G D A KVFD+MP R WNT+IG YV N L L+ M V +F +
Sbjct: 128 KCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPA 187
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNY----ILSAALVDMYAKCGRIDVSKQVFDTV 178
++ CA+L + + +H L+ VKL Y + ALV MYAK + ++++FD
Sbjct: 188 LLKACAKLRDIRSGSELHSLL----VKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGF 243
Query: 179 ARDHVSV-WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEG 237
+V WN++++ + G +L+ + +F M + P+S T V L AC G
Sbjct: 244 QEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLG 303
Query: 238 RE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
+E H +++++ +L ++ + R G + +A +++ M DVV W +L+
Sbjct: 304 KEIHASVLKSS-THSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 122/262 (46%), Gaps = 25/262 (9%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N +I + G+ A ++ +M DVVTWN+LI GYV+N+ + + L F M++A +
Sbjct: 324 NALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHK 383
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
D + S++ RL L +H +++ N + L+DMY+KC +
Sbjct: 384 SDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRA 443
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS----- 229
F + + W +I G A + ++A+ +F + + + D + IL+A S
Sbjct: 444 FLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSM 503
Query: 230 ------HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE 283
HC ++ +G ++QN +VD+ G+ N+ A + +++ +
Sbjct: 504 LIVKEIHCHILRKGLLD-TVIQNE------------LVDVYGKCRNMGYATRVFESIKGK 550
Query: 284 PDVVIWRALLSACRIHGKKELA 305
DVV W +++S+ ++G + A
Sbjct: 551 -DVVSWTSMISSSALNGNESEA 571
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 129/299 (43%), Gaps = 39/299 (13%)
Query: 2 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESL 61
D + ++ H+ L+ GY + +V AL+S YA
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYA---------------------------- 228
Query: 62 MKAGECDIARKVFDKMPVR-DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTF 120
K + AR++FD + D V WN+++ Y + + L+ L LFR M P+ +T
Sbjct: 229 -KNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTI 287
Query: 121 ASVVTGCARLGALCNAKWVHGLMLEKRVKLNYI-LSAALVDMYAKCGRIDVSKQVFDTVA 179
S +T C K +H +L+ + + + AL+ MY +CG++ ++++ +
Sbjct: 288 VSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN 347
Query: 180 RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE 239
V WN++I G + + +A+ FS M D ++ I+ A + G E
Sbjct: 348 NADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGME 407
Query: 240 -HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV--EPDVVIWRALLSA 295
H ++++ + L+ T++D+ + NL C M +A + D++ W +++
Sbjct: 408 LHAYVIKHGW--DSNLQVGNTLIDMYSKC-NL--TCYMGRAFLRMHDKDLISWTTVIAG 461
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 16/190 (8%)
Query: 120 FASVVTGCARLGALCNAKWVHGLMLE--KRVKLNYILSAALVDMYAKCGRIDVSKQVFDT 177
FA V+ C + A+ + +H + + +L++ L+ LV MY KCG +D +++VFD
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 178 VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEG 237
+ WN MI +G A+A++ M VE V +F +LKAC+ + G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 238 REHFNIMQNRFLIQPQLEHYGT------MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 291
E +++ +L ++ T +V + + +L A + + D V+W +
Sbjct: 202 SELHSLLV-------KLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNS 254
Query: 292 LLSACRIHGK 301
+LS+ GK
Sbjct: 255 ILSSYSTSGK 264
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/316 (37%), Positives = 186/316 (58%), Gaps = 5/316 (1%)
Query: 48 VMDTFSKNLVIESLMKAGE-CDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR 106
++D +N +I K G CD R+ F ++ ++DV+++N+LI G V N R + RLF
Sbjct: 340 ILDLTVQNTIISFYAKYGSLCDAFRQ-FSEIGLKDVISYNSLITGCVVNCRPEESFRLFH 398
Query: 107 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 166
M ++ + PD T V+T C+ L AL + HG + +N + AL+DMY KCG
Sbjct: 399 EMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCG 458
Query: 167 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 226
++DV+K+VFDT+ + + WN M+ G +HGL +A+++F+ M+ V PD +T + IL
Sbjct: 459 KLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILS 518
Query: 227 ACSHCGLVNEGREHFNIM-QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 285
ACSH GLV+EG++ FN M + F + P+++HY M DLL RAG L+EA + + MP EPD
Sbjct: 519 ACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPD 578
Query: 286 VVIWRALLSACRIHGKKELAEFAIANISRL--ESGDFVLLSNMYCSLKNWHNAERVRNMM 343
+ + LLSAC + EL + L + VLLSN Y + + W +A R+R +
Sbjct: 579 IRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESLVLLSNTYSAAERWEDAARIRMIQ 638
Query: 344 KIGGVRKKRGKSWIEL 359
K G+ K G SW+++
Sbjct: 639 KKRGLLKTPGYSWVDV 654
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 8/206 (3%)
Query: 40 IAHHVFSRVMDTFSKNLVIESLMK----AGECDIARKVFDKMPVRDV--VTWNTLIGGYV 93
I H+ R + T S + V+ +L + E ++AR VFD++P + + W+ +I Y
Sbjct: 21 IHQHLLKRSL-TLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYA 79
Query: 94 KNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYI 153
N L L+ ML++ V P +T+ V+ CA L A+ + K +H + +
Sbjct: 80 SNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMY 139
Query: 154 LSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM-EVE 212
+ ALVD YAKCG ++++ +VFD + + + WNAMI+G ++H D I +F M ++
Sbjct: 140 VCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRID 199
Query: 213 NVLPDSITFVGILKACSHCGLVNEGR 238
+ P+ T VG+ A G + EG+
Sbjct: 200 GLSPNLSTIVGMFPALGRAGALREGK 225
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 140/292 (47%), Gaps = 13/292 (4%)
Query: 20 TYPSLVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAGECDIARKVFDKM 77
TYP ++ A A I HV D + +++ K GE ++A KVFD+M
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEM 164
Query: 78 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-VEPDGFTFASVVTGCARLGALCNA 136
P RD+V WN +I G+ + D + LF M + + P+ T + R GAL
Sbjct: 165 PKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
Query: 137 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 196
K VHG + ++ ++D+YAK I +++VFD + + W+AMI G +
Sbjct: 225 KAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVEN 284
Query: 197 GLALDAIAVFSRMEVEN----VLPDSITFVGILKACSHCGLVNEGR-EHFNIMQNRFLIQ 251
+ +A VF +M V + V P +I IL C+ G ++ GR H ++ F++
Sbjct: 285 EMIKEAGEVFFQMLVNDNVAMVTPVAIGL--ILMGCARFGDLSGGRCVHCYAVKAGFILD 342
Query: 252 PQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 303
+++ T++ + G+L +A + ++ DV+ + +L++ C ++ + E
Sbjct: 343 LTVQN--TIISFYAKYGSLCDAFRQFSEIGLK-DVISYNSLITGCVVNCRPE 391
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 128/268 (47%), Gaps = 17/268 (6%)
Query: 52 FSKNLVIES----LMKAGECDI-ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR 106
FS +LV+++ + +C I AR+VFD ++ VTW+ +IGGYV+N + +F
Sbjct: 236 FSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFF 295
Query: 107 GMLS----AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMY 162
ML A V P ++ GCAR G L + VH ++ L+ + ++ Y
Sbjct: 296 QMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFY 353
Query: 163 AKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFV 222
AK G + + + F + V +N++I G V+ ++ +F M + PD T +
Sbjct: 354 AKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLL 413
Query: 223 GILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP 281
G+L ACSH + G H + + + + + + ++D+ + G L+ A + M
Sbjct: 414 GVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICN--ALMDMYTKCGKLDVAKRVFDTMH 471
Query: 282 VEPDVVIWRALLSACRIH--GKKELAEF 307
+ D+V W +L IH GK+ L+ F
Sbjct: 472 -KRDIVSWNTMLFGFGIHGLGKEALSLF 498
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 88/229 (38%), Gaps = 73/229 (31%)
Query: 6 AAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAG 65
+ H +VHGYA S+ AL+ Y +C G
Sbjct: 428 GSSCHGYCVVHGYAVNTSICNALMDMYTKC-----------------------------G 458
Query: 66 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 125
+ D+A++VFD M RD+V+WNT++ G+ + + L LF M V PD T ++++
Sbjct: 459 KLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILS 518
Query: 126 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 185
C+ G +D KQ+F++++R +V
Sbjct: 519 ACSH-----------------------------------SGLVDEGKQLFNSMSRGDFNV 543
Query: 186 ------WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
+N M + LA G +A ++M E PD +L AC
Sbjct: 544 IPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFE---PDIRVLGTLLSAC 589
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/309 (39%), Positives = 179/309 (57%), Gaps = 3/309 (0%)
Query: 81 DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVH 140
D V+WNT++ +++ + ++ LRLF+ ML +E EPD T +++ GC + +L VH
Sbjct: 437 DSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH 496
Query: 141 GLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLAL 200
L+ + + L+DMYAKCG + ++++FD++ V W+ +I G A G
Sbjct: 497 CYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGE 556
Query: 201 DAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTM 260
+A+ +F M+ + P+ +TFVG+L ACSH GLV EG + + MQ I P EH +
Sbjct: 557 EALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCV 616
Query: 261 VDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE---S 317
VDLL RAG L EA I M +EPDVV+W+ LLSAC+ G LA+ A NI +++ S
Sbjct: 617 VDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNS 676
Query: 318 GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMK 377
VLL +M+ S NW NA +R+ MK V+K G+SWIE+ D IH F A D H E
Sbjct: 677 TAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERD 736
Query: 378 AIHRVLEGL 386
I+ VL +
Sbjct: 737 DIYTVLHNI 745
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 145/278 (52%), Gaps = 7/278 (2%)
Query: 53 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 112
++N +I ++ + A +VF +P++D+++W+++I G+ + + L + MLS
Sbjct: 205 AQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFG 264
Query: 113 V-EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
V P+ + F S + C+ L +HGL ++ + N I +L DMYA+CG ++ +
Sbjct: 265 VFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSA 324
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 231
++VFD + R + WN +I GLA +G A +A++VFS+M +PD+I+ +L A +
Sbjct: 325 RRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKP 384
Query: 232 GLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 290
+++G + H I++ FL L +++ + +L N+ + D V W
Sbjct: 385 MALSQGMQIHSYIIKWGFL--ADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWN 442
Query: 291 ALLSACRIHGK--KELAEFAIANISRLESGDFVLLSNM 326
+L+AC H + + L F + +S E D + + N+
Sbjct: 443 TILTACLQHEQPVEMLRLFKLMLVSECEP-DHITMGNL 479
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 143/309 (46%), Gaps = 16/309 (5%)
Query: 20 TYPSLVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAGECDIARKVFDKM 77
TY SL+ A S+ + I H+ + DT N ++ K G AR+VFD M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 78 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 137
P R++V++ ++I GY +N + + +RL+ ML ++ PD F F S++ CA + K
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 138 WVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHG 197
+H +++ + I AL+ MY + ++ + +VF + + W+++I G + G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 198 LALDAIAVFSRMEVENVL-PDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEH 256
+A++ M V P+ F LKACS L+ R + + I+ +L
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS--SLL---RPDYGSQIHGLCIKSELAG 303
Query: 257 YG----TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANI 312
++ D+ R G L A + + PD W +++ +G A+ A++
Sbjct: 304 NAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAGLANNG---YADEAVSVF 359
Query: 313 SRLESGDFV 321
S++ S F+
Sbjct: 360 SQMRSSGFI 368
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 84/155 (54%), Gaps = 12/155 (7%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
+ F KN +I+ K G AR++FD M RDVV+W+TLI GY ++ + L LF+ M
Sbjct: 507 EQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMK 566
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS------AALVDMYA 163
SA +EP+ TF V+T C+ +G + GL L ++ + +S + +VD+ A
Sbjct: 567 SAGIEPNHVTFVGVLTACSHVGLV-----EEGLKLYATMQTEHGISPTKEHCSCVVDLLA 621
Query: 164 KCGRIDVSKQVFDTVARD-HVSVWNAMINGLAVHG 197
+ GR++ +++ D + + V VW +++ G
Sbjct: 622 RAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQG 656
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 210/394 (53%), Gaps = 34/394 (8%)
Query: 2 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESL 61
D A + H++++ G+ ALI+ Y +C
Sbjct: 252 DLNLALQVHSRMVRFGFNAEVEACGALINMYGKC-------------------------- 285
Query: 62 MKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 121
G+ A++VFD +++ T++ Y ++ F + L LF M + EV P+ +TFA
Sbjct: 286 ---GKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFA 342
Query: 122 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 181
++ A L L +HGL+L+ + + ++ ALV+MYAK G I+ +++ F +
Sbjct: 343 ILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR 402
Query: 182 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 241
+ WN MI+G + HGL +A+ F RM +P+ ITF+G+L+ACSH G V +G +F
Sbjct: 403 DIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYF 462
Query: 242 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
N + +F +QP ++HY +V LL +AG ++A + ++ P+E DVV WR LL+AC +
Sbjct: 463 NQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRN 522
Query: 302 ----KELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWI 357
K++AE+AI +SG +VLLSN++ + W +VR++M GV+K+ G SWI
Sbjct: 523 YRLGKKVAEYAIEKYPN-DSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWI 581
Query: 358 ELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 391
+ + H F A D H E+ I+ ++ ++ + K
Sbjct: 582 GIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIK 615
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 6/246 (2%)
Query: 30 STYARCHQPHIAHHVF----SRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTW 85
S+Y R + AH + SR D + N +I +K E ARK+FD MP R+VV+W
Sbjct: 44 SSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSW 103
Query: 86 NTLIGGYVKNVRFLDGLRLFRGM-LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 144
++ GY + + L+LF+ M S E P+ F V C+ G + K HG L
Sbjct: 104 CAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFL 163
Query: 145 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIA 204
+ + + + LV MY+ C + +V D + +SV+++ ++G G + +
Sbjct: 164 KYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLD 223
Query: 205 VFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLL 264
V + E+ + +++T++ L+ S+ +N + + M RF ++E G ++++
Sbjct: 224 VLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMV-RFGFNAEVEACGALINMY 282
Query: 265 GRAGNL 270
G+ G +
Sbjct: 283 GKCGKV 288
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 111/234 (47%), Gaps = 8/234 (3%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
A +V D +P D+ +++ + GY++ F +GL + R + + + T+ S + +
Sbjct: 190 AIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSN 249
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 189
L L A VH M+ AL++MY KCG++ +++VFD ++ + +
Sbjct: 250 LRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTI 309
Query: 190 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 249
++ +A+ +FS+M+ + V P+ TF +L + + L+ +G +++ L
Sbjct: 310 MDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG----DLLHGLVL 365
Query: 250 IQPQLEHY---GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
H +V++ ++G++E+A M D+V W ++S C HG
Sbjct: 366 KSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHG 418
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 189/356 (53%), Gaps = 13/356 (3%)
Query: 43 HVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGL 102
HV + ++D ++K + E A +F +P R V+W LI GYV+ GL
Sbjct: 387 HVGNSLVDMYAKCEMFEE---------AELIFKSLPQRTTVSWTALISGYVQKGLHGAGL 437
Query: 103 RLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMY 162
+LF M + + D TFA+V+ A +L K +H ++ N + LVDMY
Sbjct: 438 KLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMY 497
Query: 163 AKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFV 222
AKCG I + QVF+ + + WNA+I+ A +G AI F++M + PDS++ +
Sbjct: 498 AKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSIL 557
Query: 223 GILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV 282
G+L ACSHCG V +G E+F M + I P+ +HY M+DLLGR G EA ++ MP
Sbjct: 558 GVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPF 617
Query: 283 EPDVVIWRALLSACRIHGKKELAEFAIANISRLE----SGDFVLLSNMYCSLKNWHNAER 338
EPD ++W ++L+ACRIH + LAE A + +E + +V +SN+Y + W
Sbjct: 618 EPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRD 677
Query: 339 VRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
V+ M+ G++K SW+E+ IH F++ DQ+H I R + L + +G
Sbjct: 678 VKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREG 733
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 6/226 (2%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAG 65
+ A++I G+ T ++ R Q A V+ + +T S N +I +K G
Sbjct: 34 RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG 93
Query: 66 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML--SAEVEPDGFTFASV 123
+ AR +FD MP R VVTW L+G Y +N F + +LFR M S+ PD TF ++
Sbjct: 94 DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTL 153
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAA--LVDMYAKCGRIDVSKQVFDTVARD 181
+ GC VH ++ N L+ + L+ Y + R+D++ +F+ +
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK 213
Query: 182 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
+N +I G GL ++I +F +M P TF G+LKA
Sbjct: 214 DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 112/242 (46%), Gaps = 4/242 (1%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N++++S + D+A +F+++P +D VT+NTLI GY K+ + + + LF M + +
Sbjct: 188 NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ 247
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
P FTF+ V+ L + +H L + + + ++D Y+K R+ ++ +
Sbjct: 248 PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRML 307
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
FD + +N +I+ + ++ F M+ + F +L ++ +
Sbjct: 308 FDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSL 367
Query: 235 NEGREHFNIMQNRFLIQPQLEHYG-TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
GR+ Q + H G ++VD+ + EEA + K++P + V W AL+
Sbjct: 368 QMGRQLH--CQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALI 424
Query: 294 SA 295
S
Sbjct: 425 SG 426
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 197/397 (49%), Gaps = 34/397 (8%)
Query: 2 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESL 61
D KTH I G T + AL+ Y +C P A+ VFSR+
Sbjct: 279 DLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRI------------- 325
Query: 62 MKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML-SAEVEPDGFTF 120
P +DVV+W LI G+ N + F ML PD
Sbjct: 326 ----------------PRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILM 369
Query: 121 ASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR 180
V+ C+ LG L AK H +++ N + A+LV++Y++CG + + +VF+ +A
Sbjct: 370 VKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIAL 429
Query: 181 DHVSVWNAMINGLAVHGLALDAIAVFSRM-EVENVLPDSITFVGILKACSHCGLVNEGRE 239
VW ++I G +HG A+ F+ M + V P+ +TF+ IL ACSH GL++EG
Sbjct: 430 KDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLR 489
Query: 240 HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIH 299
F +M N + + P LEHY +VDLLGR G+L+ A + K MP P I LL ACRIH
Sbjct: 490 IFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIH 549
Query: 300 GKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSW 356
E+AE + LES G ++L+SN+Y W N E++RN +K G++K +S
Sbjct: 550 QNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESL 609
Query: 357 IELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFD 393
IE+ +H+F A D+ H E + ++ +L+ L K D
Sbjct: 610 IEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKED 646
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 135/274 (49%), Gaps = 7/274 (2%)
Query: 30 STYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLI 89
S RC + FS D N ++ K+ A +F + +DV++W+T+I
Sbjct: 179 SRLGRCVHGFVIRRGFSN--DLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVI 236
Query: 90 GGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVK 149
YV+N + L +F M+ EP+ T V+ CA L + H L + K ++
Sbjct: 237 ACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLE 296
Query: 150 LNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM 209
+S ALVDMY KC + + VF + R V W A+I+G ++G+A +I FS M
Sbjct: 297 TEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIM 356
Query: 210 EVE-NVLPDSITFVGILKACSHCGLVNEGR-EHFNIMQNRFLIQPQLEHYGTMVDLLGRA 267
+E N PD+I V +L +CS G + + + H +++ F P + ++V+L R
Sbjct: 357 LLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG--ASLVELYSRC 414
Query: 268 GNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
G+L A + + ++ D V+W +L++ IHGK
Sbjct: 415 GSLGNASKVFNGIALK-DTVVWTSLITGYGIHGK 447
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 140/277 (50%), Gaps = 5/277 (1%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM- 108
D + + +I +K G A ++FD++ D+VTW++++ G+ KN + FR M
Sbjct: 95 DLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMV 154
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
++++V PD T ++V+ C +L + VHG ++ + + L +L++ YAK
Sbjct: 155 MASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAF 214
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
+ +F +A V W+ +I +G A +A+ VF+ M + P+ T + +L+AC
Sbjct: 215 KEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQAC 274
Query: 229 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 288
+ + +GR+ + + L + +++ +VD+ + + EEA + +P DVV
Sbjct: 275 AAAHDLEQGRKTHELAIRKGL-ETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVS 332
Query: 289 WRALLSACRIHG--KKELAEFAIANISRLESGDFVLL 323
W AL+S ++G + + EF+I + D +L+
Sbjct: 333 WVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILM 369
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 119/234 (50%), Gaps = 9/234 (3%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
AR++F +M R + WNTL+ + ++ + L F M E +PD FT + C
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 130 LGALCNAKWVHGLMLEKRVKL--NYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 187
L + + +HG ++K V L + + ++L+ MY KCGR+ + ++FD + + + W+
Sbjct: 73 LREVNYGEMIHGF-VKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 188 AMINGLAVHGLALDAIAVFSRMEV-ENVLPDSITFVGILKACSHCGLVNEGR-EHFNIMQ 245
+M++G +G A+ F RM + +V PD +T + ++ AC+ GR H +++
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 246 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIH 299
F L ++++ ++ +EA N+ K M E DV+ W ++ AC +
Sbjct: 192 RGF--SNDLSLVNSLLNCYAKSRAFKEAVNLFK-MIAEKDVISWSTVI-ACYVQ 241
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 229 bits (583), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/314 (38%), Positives = 186/314 (59%), Gaps = 5/314 (1%)
Query: 48 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 107
V D F ++ I KAGE + ARKVFD+ P R + +WN +IGG R + + +F
Sbjct: 149 VGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVD 208
Query: 108 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRV--KLNYILSAALVDMYAKC 165
M + +EPD FT SV C LG L A +H +L+ + K + ++ +L+DMY KC
Sbjct: 209 MKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKC 268
Query: 166 GRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL 225
GR+D++ +F+ + + +V W++MI G A +G L+A+ F +M V P+ ITFVG+L
Sbjct: 269 GRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVL 328
Query: 226 KACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 285
AC H GLV EG+ +F +M++ F ++P L HYG +VDLL R G L+EA +++ MP++P+
Sbjct: 329 SACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPN 388
Query: 286 VVIWRALLSACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNM 342
V++W L+ C G E+AE+ + LE G +V+L+N+Y W + ERVR +
Sbjct: 389 VMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKL 448
Query: 343 MKIGGVRKKRGKSW 356
MK V K S+
Sbjct: 449 MKTKKVAKIPAYSY 462
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 114/228 (50%), Gaps = 5/228 (2%)
Query: 68 DIAR-KVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTG 126
DI R ++ D+ P+ WN ++ Y+++ LD ++++ GM+ + V PD ++ V+
Sbjct: 69 DIFRSRILDQYPI--AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKA 126
Query: 127 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 186
++ K +H + + + + + +Y K G + +++VFD + W
Sbjct: 127 AVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSW 186
Query: 187 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQ 245
NA+I GL G A +A+ +F M+ + PD T V + +C G ++ + H ++Q
Sbjct: 187 NAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQ 246
Query: 246 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
+ + + +++D+ G+ G ++ A ++ + M + +VV W +++
Sbjct: 247 AKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMR-QRNVVSWSSMI 293
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/345 (33%), Positives = 198/345 (57%), Gaps = 8/345 (2%)
Query: 57 VIESLMKAGECDIARKVFDK--MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
+I+ K+G I++K+F+ RD TWN++I GY +N +FR ML +
Sbjct: 459 LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIR 518
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
P+ T AS++ C+++G++ K +HG + + + N +++ALVDMY+K G I ++ +
Sbjct: 519 PNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDM 578
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
F + + MI G HG+ AI++F M+ + PD+ITFV +L ACS+ GL+
Sbjct: 579 FSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLI 638
Query: 235 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV-IWRALL 293
+EG + F M+ + IQP EHY + D+LGR G + EA +K + E ++ +W +LL
Sbjct: 639 DEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLL 698
Query: 294 SACRIHGKKELAEFAIANISRLE-----SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGV 348
+C++HG+ ELAE +++ + SG VLLSNMY + W + ++VR M+ G+
Sbjct: 699 GSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGL 758
Query: 349 RKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFD 393
+K+ G+S IE+ ++ F + DQ H I+ V++GL + + D
Sbjct: 759 KKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGD 803
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 134/257 (52%), Gaps = 11/257 (4%)
Query: 46 SRVMDTFSKNLVIESLMKAGEC---DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGL 102
SRV+ N+ + S + A +C D+ RKVFD M ++VV WNTLI YVK R +
Sbjct: 141 SRVVHNSLMNMYV-SCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEAC 199
Query: 103 RLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML---EKRVKLNYILSAALV 159
R F M+ EV+P +F +V + ++ A +GLML ++ VK +++S+A +
Sbjct: 200 RQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSA-I 258
Query: 160 DMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVF-SRMEVENVLPDS 218
MYA+ G I+ S++VFD+ ++ VWN MI + +++I +F + + ++ D
Sbjct: 259 SMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDE 318
Query: 219 ITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIK 278
+T++ A S V GR+ + F P + MV + R G++ ++ +
Sbjct: 319 VTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVFL 377
Query: 279 AMPVEPDVVIWRALLSA 295
+M E DVV W ++SA
Sbjct: 378 SMR-ERDVVSWNTMISA 393
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 123/261 (47%), Gaps = 10/261 (3%)
Query: 48 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLF-R 106
V D F + I + G+ + +R+VFD R++ WNT+IG YV+N ++ + LF
Sbjct: 248 VKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLE 307
Query: 107 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 166
+ S E+ D T+ + + L + + HG + + +L ++ +L+ MY++CG
Sbjct: 308 AIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCG 367
Query: 167 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 226
+ S VF ++ V WN MI+ +GL + + + M+ + D IT +L
Sbjct: 368 SVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLS 427
Query: 227 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGT---MVDLLGRAGNLEEACNMIKAMP-V 282
A S+ G++ + FLI+ ++ G ++D+ ++G + + + +
Sbjct: 428 AASNLRNKEIGKQ-----THAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYA 482
Query: 283 EPDVVIWRALLSACRIHGKKE 303
E D W +++S +G E
Sbjct: 483 ERDQATWNSMISGYTQNGHTE 503
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 110/254 (43%), Gaps = 28/254 (11%)
Query: 58 IESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEP-- 115
+ + + G +AR++FD +P V WNT+I G++ N + L + M + P
Sbjct: 46 LSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM--KKTAPFT 103
Query: 116 --DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK------CGR 167
D +T++S + CA L K VH ++ + ++ +L++MY C
Sbjct: 104 NCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFE 163
Query: 168 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
DV ++VFD + R +V WN +I+ G +A F M V P ++FV + A
Sbjct: 164 YDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPA 223
Query: 228 CSHCGLVNEGREHFNIM--------QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKA 279
S + + + +M ++ F++ + Y + D+ E+ +
Sbjct: 224 VSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDI--------ESSRRVFD 275
Query: 280 MPVEPDVVIWRALL 293
VE ++ +W ++
Sbjct: 276 SCVERNIEVWNTMI 289
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
+ F + +++ KAG A +F + R+ VT+ T+I GY ++ + LF M
Sbjct: 555 NVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQ 614
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAA------LVDMYA 163
+ ++PD TF +V++ C+ G + GL + + ++ Y + + + DM
Sbjct: 615 ESGIKPDAITFVAVLSACSYSGLI-----DEGLKIFEEMREVYNIQPSSEHYCCITDMLG 669
Query: 164 KCGRIDVSKQVFDTVARDH--VSVWNAMINGLAVHG 197
+ GR++ + + + + +W +++ +HG
Sbjct: 670 RVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHG 705
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 204/357 (57%), Gaps = 13/357 (3%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLV-----IESLMKA 64
HA++I L+ AL+ TY + + A VF + D +N+V I M
Sbjct: 163 HARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKD---ENVVCCTSMISGYMNQ 219
Query: 65 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLD-GLRLFRGMLSAEVEPDGFTFASV 123
G + A ++F+ V+D+V +N ++ G+ ++ + ++ M A P+ TFASV
Sbjct: 220 GFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASV 279
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
+ C+ L + + VH +++ V + + ++L+DMYAKCG I+ +++VFD + +V
Sbjct: 280 IGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNV 339
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 243
W +MI+G +G +A+ +F+RM+ + P+ +TF+G L ACSH GLV++G E F
Sbjct: 340 FSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFES 399
Query: 244 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 303
MQ + ++P++EHY +VDL+GRAG+L +A +AMP PD IW ALLS+C +HG E
Sbjct: 400 MQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVE 459
Query: 304 LAEFAIANISRLES----GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSW 356
LA A + + +L + G ++ LSN+Y S W N ++R +MK + K G+SW
Sbjct: 460 LASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 84/316 (26%)
Query: 62 MKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 121
+K G AR+VFD++P + +N +I GY+K+ + L L + M + + DG+T +
Sbjct: 80 LKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLS 139
Query: 122 SVVTGCARLGA-------LCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
V+ G+ LC + VH +++ V+L+ +L ALVD Y K G+++ ++ V
Sbjct: 140 MVLKASNSRGSTMILPRSLC--RLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTV 197
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL------------------- 215
F+T+ ++V +MI+G G DA +F+ +V++++
Sbjct: 198 FETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRS 257
Query: 216 -------------PDSITFVGILKACS--------------------------------- 229
P+ TF ++ ACS
Sbjct: 258 VDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDM 317
Query: 230 --HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM---IKAMPVEP 284
CG +N+ R F+ MQ + + + +M+D G+ GN EEA + +K +EP
Sbjct: 318 YAKCGGINDARRVFDQMQEKNVFS-----WTSMIDGYGKNGNPEEALELFTRMKEFRIEP 372
Query: 285 DVVIWRALLSACRIHG 300
+ V + LSAC G
Sbjct: 373 NYVTFLGALSACSHSG 388
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 22/202 (10%)
Query: 136 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAV 195
K +H +++ + + +S L+ ++ KCG + ++QVFD + + +S +N MI+G
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 196 HGLALDAIAVFSRMEVENVLPDSITFVGILKAC-----------SHCGLVNEGREHFNIM 244
HGL + + + RM D T +LKA S C LV+ ++
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 245 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKEL 304
+ LI +VD ++G LE A + + M E +VV +++S G E
Sbjct: 173 LDDVLIT-------ALVDTYVKSGKLESARTVFETMKDE-NVVCCTSMISGYMNQGFVED 224
Query: 305 AEFAIANISRLESGDFVLLSNM 326
AE I N ++++ D V+ + M
Sbjct: 225 AE-EIFNTTKVK--DIVVYNAM 243
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 225 bits (574), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/350 (36%), Positives = 199/350 (56%), Gaps = 11/350 (3%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D+ ++++ K G+ A K+FD+MPVRDV +WN LI G V R + + L++ M
Sbjct: 143 DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWV-HGLMLEKRVKLNYILSAALVDMYAKCGRI 168
+ + T + + C+ LG + + + HG + N I+S A +DMY+KCG +
Sbjct: 203 TEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSND-----NVIVSNAAIDMYSKCGFV 257
Query: 169 DVSKQVFDT-VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
D + QVF+ + V WN MI G AVHG A A+ +F ++E + PD ++++ L A
Sbjct: 258 DKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTA 317
Query: 228 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 287
C H GLV G FN M + ++ ++HYG +VDLL RAG L EA ++I +M + PD V
Sbjct: 318 CRHAGLVEYGLSVFNNMACKG-VERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPV 376
Query: 288 IWRALLSACRIHGKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMK 344
+W++LL A I+ E+AE A I + GDFVLLSN+Y + W + RVR+ M+
Sbjct: 377 LWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDME 436
Query: 345 IGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
V+K G S+IE +IH+F +D+SH + + I+ ++ + + + DG
Sbjct: 437 SKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDG 486
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 114/249 (45%), Gaps = 15/249 (6%)
Query: 65 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS------AEVEPDGF 118
G+ A ++F +P WN +I G+ + +R ML A D
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 119 TFASVVTGCARLGALCNA--KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 176
T + + CAR ALC++ +H + + + + +L L+D Y+K G + + ++FD
Sbjct: 111 TCSFTLKACAR--ALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFD 168
Query: 177 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 236
+ V+ WNA+I GL A +A+ ++ RME E + +T V L ACSH G V E
Sbjct: 169 EMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKE 228
Query: 237 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 296
G F+ N +I +D+ + G +++A + + + VV W +++
Sbjct: 229 GENIFHGYSNDNVIVSN-----AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGF 283
Query: 297 RIHGKKELA 305
+HG+ A
Sbjct: 284 AVHGEAHRA 292
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 138/407 (33%), Positives = 224/407 (55%), Gaps = 17/407 (4%)
Query: 2 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIE 59
D A + H + G T + AL+ Y +C +F + + S +V++
Sbjct: 126 DLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLD 185
Query: 60 SLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGF- 118
+++K + R+VF +MP R+ V W ++ GY+ + L L M+ F
Sbjct: 186 TVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFV 245
Query: 119 TFASVVTGCARLGALCNAKWVHGLMLEKRVKL-------NYILSAALVDMYAKCGRIDVS 171
T S+++ CA+ G L +WVH L+K + + + ++ ALVDMYAKCG ID S
Sbjct: 246 TLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSS 305
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 231
VF + + +V WNA+ +GLA+HG I +F +M + V PD +TF +L ACSH
Sbjct: 306 MNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHS 364
Query: 232 GLVNEGREHFNIMQNRFL-IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 290
G+V+EG F+ + RF ++P+++HY MVDLLGRAG +EEA +++ MPV P+ V+
Sbjct: 365 GIVDEGWRCFHSL--RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLG 422
Query: 291 ALLSACRIHGKKELAEFAIANISRLESGDF---VLLSNMYCSLKNWHNAERVRNMMKIGG 347
+LL +C +HGK E+AE + ++ G+ +L+SNMY + A+ +R ++ G
Sbjct: 423 SLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRG 482
Query: 348 VRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
+RK G S I + DS+H+F++ D+SH K I+ L +I+R + G
Sbjct: 483 IRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAG 529
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 132/292 (45%), Gaps = 43/292 (14%)
Query: 51 TFSKNLVIESLMKAGECDIARKVFDKMPV--RDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
++ N + + +GE A+K+FD++P+ +D V W TL+ + + ++ ++LF M
Sbjct: 43 SYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEM 102
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
VE D + + CA+L L A+ HG+ ++ V + + AL+DMY KCG +
Sbjct: 103 RRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLV 162
Query: 169 DVSKQVFD----------TVARDHVSVWNAMINGLAVHGLALDAIAV------------- 205
K++F+ TV D V W + G V + AV
Sbjct: 163 SEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAG 222
Query: 206 FSRMEVENVLPDS----------ITFVGILKACSHCGLVNEGR-EHFNIMQNRFLIQPQL 254
F+R EV +L + +T +L AC+ G + GR H ++ ++ +
Sbjct: 223 FTR-EVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEA 281
Query: 255 EHYGTM-----VDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
+ M VD+ + GN++ + N+ + M + +VV W AL S +HGK
Sbjct: 282 SYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR-KRNVVTWNALFSGLAMHGK 332
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 120/340 (35%), Positives = 199/340 (58%), Gaps = 22/340 (6%)
Query: 65 GECDIARKVFDKMPVR-DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 123
G+ D AR+VFD+ P + ++V W +I Y +N ++ + LF+ M + ++E DG
Sbjct: 114 GDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVA 173
Query: 124 VTGCARLGALCNAKWVHG--LMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 181
++ CA LGA+ + ++ + ++R+ ++ L +L++MY K G + ++++FD R
Sbjct: 174 LSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRK 233
Query: 182 HVSVWNAMINGLAVHGLALDAIAVFSRMEVEN------VLPDSITFVGILKACSHCGLVN 235
V+ + +MI G A++G A +++ +F +M+ + + P+ +TF+G+L ACSH GLV
Sbjct: 234 DVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVE 293
Query: 236 EGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
EG+ HF M + ++P+ H+G MVDL R+G+L++A I MP++P+ VIWR LL A
Sbjct: 294 EGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGA 353
Query: 296 CRIHGKKELAEFA---IANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKR 352
C +HG EL E I + R GD+V LSN+Y S W ++R+ VRK+R
Sbjct: 354 CSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDR-----VRKRR 408
Query: 353 --GKSWIELGDSIHQFNAADQSHAE---MKAIHRVLEGLI 387
GKSWIELG I++F + ++ E M I VL L+
Sbjct: 409 MPGKSWIELGSIINEFVSGPDNNDEQLMMGEISEVLRCLV 448
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 100/195 (51%), Gaps = 12/195 (6%)
Query: 116 DGFT--FASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS--AALVDMYAKCGRIDVS 171
D F+ FA V+ + +L + + +H L+ +++ N ++ +LV Y+ G +D +
Sbjct: 63 DSFSVLFAIKVSSAQKASSL-DGRQIHALV--RKLGFNAVIQIQTSLVGFYSSVGDVDYA 119
Query: 172 KQVFD-TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 230
+QVFD T + ++ +W AMI+ + +++AI +F RME E + D + L AC+
Sbjct: 120 RQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACAD 179
Query: 231 CGLVNEGREHF--NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 288
G V G E + +I + R L L +++++ ++G E+A + + DV
Sbjct: 180 LGAVQMGEEIYSRSIKRKRRLAM-DLTLRNSLLNMYVKSGETEKARKLFDE-SMRKDVTT 237
Query: 289 WRALLSACRIHGKKE 303
+ +++ ++G+ +
Sbjct: 238 YTSMIFGYALNGQAQ 252
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 89/190 (46%), Gaps = 16/190 (8%)
Query: 24 LVAALISTYARCHQPHIAHHVFSR--------VMDTFSKNLVIESLMKAGECDIARKVFD 75
+V +S A + ++SR MD +N ++ +K+GE + ARK+FD
Sbjct: 169 IVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFD 228
Query: 76 KMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE------VEPDGFTFASVVTGCAR 129
+ +DV T+ ++I GY N + + L LF+ M + + + P+ TF V+ C+
Sbjct: 229 ESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSH 288
Query: 130 LGALCNAKW-VHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWN 187
G + K ++++ +K +VD++ + G + + + + + + + +W
Sbjct: 289 SGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWR 348
Query: 188 AMINGLAVHG 197
++ ++HG
Sbjct: 349 TLLGACSLHG 358
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 123/368 (33%), Positives = 203/368 (55%), Gaps = 5/368 (1%)
Query: 28 LISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTW 85
LI+ Y R H+A +F + + + S + +I+ + +GE + A+++F+ MP ++VV+W
Sbjct: 202 LINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSW 261
Query: 86 NTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLE 145
TLI G+ + + + + ML ++P+ +T A+V++ C++ GAL + +HG +L+
Sbjct: 262 TTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILD 321
Query: 146 KRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAV 205
+KL+ + ALVDMYAKCG +D + VF + + W AMI G AVHG AI
Sbjct: 322 NGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQC 381
Query: 206 FSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLG 265
F +M PD + F+ +L AC + V+ G F+ M+ + I+P L+HY +VDLLG
Sbjct: 382 FRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLG 441
Query: 266 RAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLES---GDFVL 322
RAG L EA +++ MP+ PD+ W AL AC+ H AE N+ L+ G ++
Sbjct: 442 RAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIF 501
Query: 323 LSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRV 382
L + S N + E+ R ++ + G S+IEL +++F+A D SH + I
Sbjct: 502 LDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLK 561
Query: 383 LEGLIQRA 390
L+ +I A
Sbjct: 562 LDEIISLA 569
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 28/258 (10%)
Query: 60 SLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFT 119
SL+K+ D + +F R+ N LI G +N RF +R F ML V+PD T
Sbjct: 71 SLLKSP--DYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLT 128
Query: 120 FASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF---- 175
F V+ ++LG + +H L+ V + + +LVDMYAK G++ + QVF
Sbjct: 129 FPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESP 188
Query: 176 DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVN 235
D + ++ + +WN +ING A +F M N S ++ ++K G +N
Sbjct: 189 DRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERN----SGSWSTLIKGYVDSGELN 244
Query: 236 EGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRAL 292
++ F +M + ++ + T+++ + G+ E A + M ++P+ A+
Sbjct: 245 RAKQLFELMPEKNVVS-----WTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAV 299
Query: 293 LSAC----------RIHG 300
LSAC RIHG
Sbjct: 300 LSACSKSGALGSGIRIHG 317
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 113/273 (41%), Gaps = 20/273 (7%)
Query: 112 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
+ PD F S++ C +L + VH +L + V L+ ++A LV + D S
Sbjct: 24 QASPDESHFISLIHACKDTASL---RHVHAQILRRGV-LSSRVAAQLVSCSSLLKSPDYS 79
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 231
+F + V NA+I GL + ++ F M V PD +TF +LK+ S
Sbjct: 80 LSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKL 139
Query: 232 GLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVV 287
G GR H ++N + ++VD+ + G L+ A + + P + ++
Sbjct: 140 GFRWLGRALHAATLKN--FVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESIL 197
Query: 288 IWRALLSA-CRIHGKKELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIG 346
IW L++ CR +A ++ SG + L Y + A+++ +M
Sbjct: 198 IWNVLINGYCRAK-DMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMP-- 254
Query: 347 GVRKKRGKSWIELGDSIHQ---FNAADQSHAEM 376
+K SW L + Q + A ++ EM
Sbjct: 255 ---EKNVVSWTTLINGFSQTGDYETAISTYFEM 284
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 225 bits (573), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 188/346 (54%), Gaps = 7/346 (2%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D N +I+ K+ + A +F+ M RD+ TWN+++ + L LF ML
Sbjct: 296 DIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML 355
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLM----LEKRVKLNYILSAALVDMYAKC 165
+ + PD T +V+ C RL +L + +HG M L R N + +L+DMY KC
Sbjct: 356 CSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKC 415
Query: 166 GRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL 225
G + ++ VFD++ + WN MING V A+ +FS M V PD ITFVG+L
Sbjct: 416 GDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLL 475
Query: 226 KACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 285
+ACSH G +NEGR M+ + I P +HY ++D+LGRA LEEA + + P+ +
Sbjct: 476 QACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDN 535
Query: 286 VVIWRALLSACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNM 342
V+WR++LS+CR+HG K+LA A + LE G +VL+SN+Y + VR+
Sbjct: 536 PVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDA 595
Query: 343 MKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQ 388
M+ V+K G SWI L + +H F +Q+H E K+IH L +I
Sbjct: 596 MRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVIS 641
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 131/270 (48%), Gaps = 20/270 (7%)
Query: 43 HVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRD-VVTWNTLIGGYVKNVRFLDG 101
+V S ++ ++SK + +E A+KVFD++P RD V WN L+ GY + RF D
Sbjct: 196 YVGSGLVTSYSKFMSVED---------AQKVFDELPDRDDSVLWNALVNGYSQIFRFEDA 246
Query: 102 LRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDM 161
L +F M V T SV++ G + N + +HGL ++ + ++S AL+DM
Sbjct: 247 LLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDM 306
Query: 162 YAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALD---AIAVFSRMEVENVLPDS 218
Y K ++ + +F+ + + WN++ L VH D +A+F RM + PD
Sbjct: 307 YGKSKWLEEANSIFEAMDERDLFTWNSV---LCVHDYCGDHDGTLALFERMLCSGIRPDI 363
Query: 219 ITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEH---YGTMVDLLGRAGNLEEACN 275
+T +L C + +GRE M L+ + + + +++D+ + G+L +A
Sbjct: 364 VTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARM 423
Query: 276 MIKAMPVEPDVVIWRALLSACRIHGKKELA 305
+ +M V+ D W +++ + ELA
Sbjct: 424 VFDSMRVK-DSASWNIMINGYGVQSCGELA 452
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 112/215 (52%), Gaps = 4/215 (1%)
Query: 80 RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWV 139
RDV +N LI G+V N LD + +R M + + PD +TF S++ G + L + K V
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKV 182
Query: 140 HGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNAMINGLAVHGL 198
HGL + + + + LV Y+K ++ +++VFD + RD +WNA++NG +
Sbjct: 183 HGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFR 242
Query: 199 ALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG 258
DA+ VFS+M E V T +L A + G ++ GR + + + +
Sbjct: 243 FEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRS-IHGLAVKTGSGSDIVVSN 301
Query: 259 TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
++D+ G++ LEEA ++ +AM E D+ W ++L
Sbjct: 302 ALIDMYGKSKWLEEANSIFEAMD-ERDLFTWNSVL 335
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
Query: 127 CARLGALCNAKWVHGLMLEKR-VKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 185
CA+ + + +HG M+ K + + +LV+MYAKCG + + VF RD V
Sbjct: 70 CAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSERD-VFG 128
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 245
+NA+I+G V+G LDA+ + M +LPD TF +LK L + + H +
Sbjct: 129 YNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHG--LA 186
Query: 246 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
+ +V + ++E+A + +P D V+W AL++
Sbjct: 187 FKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 236
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 224 bits (571), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 121/345 (35%), Positives = 191/345 (55%), Gaps = 7/345 (2%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N +I + GE AR+VFD M RD TW +I Y + L+ L LF M V
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVR 328
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
P + S+++ CA L +L + VH ++ + + +++ L+ MY KCG + +K V
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLV 388
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
FD + + +WN++I+G A HGL +A+ +F M +P+ +T + IL ACS+ G +
Sbjct: 389 FDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKL 448
Query: 235 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 294
EG E F M+++F + P +EHY VD+LGRAG +++A +I++M ++PD +W ALL
Sbjct: 449 EEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLG 508
Query: 295 ACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKK 351
AC+ H + +LAE A + E +G +VLLS++ S W + VR M+ V K
Sbjct: 509 ACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKF 568
Query: 352 RGKSWIELGDSIHQFNAAD-QSHAEMKAIHRVLE---GLIQRAKF 392
G SWIE+G +H F ++H E I +LE GL++ A +
Sbjct: 569 PGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGY 613
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 124/259 (47%), Gaps = 12/259 (4%)
Query: 48 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 107
V D + +I L + G D AR +FD+M R+VVTW T+I GY +N R +LF
Sbjct: 169 VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEV 228
Query: 108 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 167
M E ++ S++ G G + +A+ +M K V I A++ + + G
Sbjct: 229 M----PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPV----IACNAMIVGFGEVGE 280
Query: 168 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
I +++VFD + + W MI G L+A+ +F++M+ + V P + + IL
Sbjct: 281 ISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSV 340
Query: 228 CSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 286
C+ + GR+ H ++++ +F + ++ + + G L +A ++ D+
Sbjct: 341 CATLASLQYGRQVHAHLVRCQF--DDDVYVASVLMTMYVKCGELVKA-KLVFDRFSSKDI 397
Query: 287 VIWRALLSACRIHGKKELA 305
++W +++S HG E A
Sbjct: 398 IMWNSIISGYASHGLGEEA 416
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 17/232 (7%)
Query: 53 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 112
S N ++ G AR++FD+M R+VV+WN L+ GY+KN ++ +F M
Sbjct: 50 SWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERN 109
Query: 113 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 172
V ++ ++V G + G + A+ + M E+ ++ L+D GRID ++
Sbjct: 110 V----VSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLID----DGRIDKAR 161
Query: 173 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 232
+++D + V MI GL G +A +F M NV +T+ ++
Sbjct: 162 KLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV----VTWTTMITGYRQNN 217
Query: 233 LVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEP 284
V+ R+ F +M + + + +M+ +G +E+A + MP++P
Sbjct: 218 RVDVARKLFEVMPEKTEVS-----WTSMLLGYTLSGRIEDAEEFFEVMPMKP 264
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 20 TYPSLV------AALIS-TYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARK 72
++PSL+ A L S Y R H+ F D + ++++ +K GE A+
Sbjct: 330 SFPSLISILSVCATLASLQYGRQVHAHLVRCQFDD--DVYVASVLMTMYVKCGELVKAKL 387
Query: 73 VFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGA 132
VFD+ +D++ WN++I GY + + L++F M S+ P+ T +++T C+ G
Sbjct: 388 VFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGK 447
Query: 133 LCNAKWVHGLMLEKRVKLNYILSAAL------VDMYAKCGRIDVSKQVFDTVA-RDHVSV 185
L GL + + ++ + ++ + VDM + G++D + ++ +++ + +V
Sbjct: 448 L-----EEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATV 502
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFV 222
W A++ H LD V ++ EN ++ T+V
Sbjct: 503 WGALLGACKTHS-RLDLAEVAAKKLFENEPDNAGTYV 538
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 113/249 (45%), Gaps = 18/249 (7%)
Query: 58 IESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDG 117
I L + G+ + ARK FD + + + +WN+++ GY N + +LF M V
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV---- 79
Query: 118 FTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDT 177
++ +V+G + + A+ V LM E+ N + A+V Y + G + ++ +F
Sbjct: 80 VSWNGLVSGYIKNRMIVEARNVFELMPER----NVVSWTAMVKGYMQEGMVGEAESLFWR 135
Query: 178 VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEG 237
+ + W M GL G A ++ M V++V+ + G+ + G V+E
Sbjct: 136 MPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCRE----GRVDEA 191
Query: 238 REHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACR 297
R F+ M+ R ++ + TM+ + ++ A + + MP E V W ++L
Sbjct: 192 RLIFDEMRERNVVT-----WTTMITGYRQNNRVDVARKLFEVMP-EKTEVSWTSMLLGYT 245
Query: 298 IHGKKELAE 306
+ G+ E AE
Sbjct: 246 LSGRIEDAE 254
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 224 bits (571), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 182/305 (59%), Gaps = 7/305 (2%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N +I+ K G+ +A ++F + +V+TWN +I YV + + LF M+S +
Sbjct: 472 NSLIDLYGKMGDLTVAWRMFCEADT-NVITWNAMIASYVHCEQSEKAIALFDRMVSENFK 530
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
P T +++ C G+L + +H + E ++N LSAAL+DMYAKCG ++ S+++
Sbjct: 531 PSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSREL 590
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
FD + WN MI+G +HG AIA+F +ME +V P TF+ +L AC+H GLV
Sbjct: 591 FDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLV 650
Query: 235 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 294
+G++ F + +++ ++P L+HY +VDLL R+GNLEEA + + +MP PD VIW LLS
Sbjct: 651 EQGKKLF-LKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLS 709
Query: 295 ACRIHGKKE----LAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRK 350
+C HG+ E +AE A+A+ + G +++L+NMY + W AER R MM+ GV K
Sbjct: 710 SCMTHGEFEMGIRMAERAVASDPQ-NDGYYIMLANMYSAAGKWEEAERAREMMRESGVGK 768
Query: 351 KRGKS 355
+ G S
Sbjct: 769 RAGHS 773
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 142/285 (49%), Gaps = 17/285 (5%)
Query: 40 IAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVR-DVVTWNTLIGGYVKNVRF 98
+ H FS +D+ N ++ K +A K+F ++ + WNT++ GY K
Sbjct: 357 VIRHCFS--LDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCH 414
Query: 99 LDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAAL 158
+ + LFR + + +E D + SV++ C+ +GA+ K +H +++ + L + +L
Sbjct: 415 VKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSL 474
Query: 159 VDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDS 218
+D+Y K G + V+ ++F A +V WNAMI + AIA+F RM EN P S
Sbjct: 475 IDLYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSS 533
Query: 219 ITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQ----LEHYGTMVDLLGRAGNLEEAC 274
IT V +L AC + G + G+ M +R++ + + L ++D+ + G+LE++
Sbjct: 534 ITLVTLLMACVNTGSLERGQ-----MIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSR 588
Query: 275 NMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGD 319
+ A + D V W ++S +HG E AIA ++E D
Sbjct: 589 ELFDA-GNQKDAVCWNVMISGYGMHGD---VESAIALFDQMEESD 629
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 114/258 (44%), Gaps = 6/258 (2%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
+ F + +I S G+ +++ +VF + RD+ WN++I + N + L F ML
Sbjct: 58 NIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSML 117
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEK-RVKLNYILSAALVDMYAKCGRI 168
+ PD FT VV+ CA L +VHGL+L+ N + A+ V Y+KCG +
Sbjct: 118 LSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFL 177
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENV---LPDSITFVGIL 225
+ VFD + V W A+I+G +G + + +M P+ T
Sbjct: 178 QDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGF 237
Query: 226 KACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 285
+ACS+ G + EGR L + +M ++GN EA + + E D
Sbjct: 238 QACSNLGALKEGRCLHGFAVKNGLASSKFVQ-SSMFSFYSKSGNPSEAYLSFRELGDE-D 295
Query: 286 VVIWRALLSACRIHGKKE 303
+ W +++++ G E
Sbjct: 296 MFSWTSIIASLARSGDME 313
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 122/260 (46%), Gaps = 9/260 (3%)
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
K+G A F ++ D+ +W ++I ++ + +F M + + PDG +
Sbjct: 277 KSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISC 336
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD- 181
++ ++ + K HG ++ L+ + +L+ MY K + V++++F ++ +
Sbjct: 337 LINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEG 396
Query: 182 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-H 240
+ WN M+ G + I +F +++ + DS + ++ +CSH G V G+ H
Sbjct: 397 NKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLH 456
Query: 241 FNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
+++ + + +++DL G+ G+L A M + +V+ W A++ A +H
Sbjct: 457 CYVVKTS--LDLTISVVNSLIDLYGKMGDLTVAWRMF--CEADTNVITWNAMI-ASYVHC 511
Query: 301 KKELAEFAIANISRLESGDF 320
E +E AIA R+ S +F
Sbjct: 512 --EQSEKAIALFDRMVSENF 529
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 3/179 (1%)
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE---PDGFT 119
K G A VFD+MP RDVV W +I G+V+N GL M SA + P+ T
Sbjct: 173 KCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRT 232
Query: 120 FASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA 179
C+ LGAL + +HG ++ + + + +++ Y+K G + F +
Sbjct: 233 LECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELG 292
Query: 180 RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR 238
+ + W ++I LA G ++ +F M+ + + PD + ++ LV +G+
Sbjct: 293 DEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGK 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
Query: 140 HGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLA 199
+ L++ + N +++ L+ YA G+ ++S +VF V R + +WN++I +G
Sbjct: 47 NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDY 106
Query: 200 LDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGT 259
++ F M + PD T ++ AC+ + G ++ +
Sbjct: 107 ARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGAS 166
Query: 260 MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 303
V + G L++AC + MP + DVV W A++S +G+ E
Sbjct: 167 FVYFYSKCGFLQDACLVFDEMP-DRDVVAWTAIISGHVQNGESE 209
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 224 bits (571), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 215/404 (53%), Gaps = 13/404 (3%)
Query: 2 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM------DTFSKN 55
D + H ++ + G V +L+S ++ + V ++ D F
Sbjct: 476 DPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL 535
Query: 56 LVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEP 115
V+ + GE + +FD M + +V+WNT+I GY++N L +FR M+ ++
Sbjct: 536 SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQL 595
Query: 116 DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF 175
G + V C+ L +L + H L+ ++ + ++ +L+DMYAK G I S +VF
Sbjct: 596 CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVF 655
Query: 176 DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVN 235
+ + + WNAMI G +HGLA +AI +F M+ PD +TF+G+L AC+H GL++
Sbjct: 656 NGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIH 715
Query: 236 EGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMI-KAMPVEPDVVIWRALLS 294
EG + + M++ F ++P L+HY ++D+LGRAG L++A ++ + M E DV IW++LLS
Sbjct: 716 EGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775
Query: 295 ACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKK 351
+CRIH E+ E A + LE ++VLLSN+Y L W + +VR M +RK
Sbjct: 776 SCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKD 835
Query: 352 RGKSWIELGDSIHQFNAADQ---SHAEMKAIHRVLEGLIQRAKF 392
G SWIEL + F ++ E+K++ +LE I + +
Sbjct: 836 AGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGY 879
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 120/247 (48%), Gaps = 12/247 (4%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA--E 112
N +++ K G A+ +F ++VV+WNT++GG+ + R ML+ +
Sbjct: 331 NALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGED 390
Query: 113 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 172
V+ D T + V C L + K +H L++ N +++ A V YAKCG + ++
Sbjct: 391 VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQ 450
Query: 173 QVFDTVARDHVSVWNAMINGLAVHG---LALDAIAVFSRMEVENVLPDSITFVGILKACS 229
+VF + V+ WNA+I G A L+LDA +M++ +LPDS T +L ACS
Sbjct: 451 RVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDA---HLQMKISGLLPDSFTVCSLLSACS 507
Query: 230 HCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 288
+ G+E H I++N ++ L Y +++ L G L + AM + +V
Sbjct: 508 KLKSLRLGKEVHGFIIRN--WLERDLFVYLSVLSLYIHCGELCTVQALFDAME-DKSLVS 564
Query: 289 WRALLSA 295
W +++
Sbjct: 565 WNTVITG 571
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 114/242 (47%), Gaps = 9/242 (3%)
Query: 65 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA-EVEPDGFTFASV 123
G D +R VFD + +++ WN +I Y +N + + L F M+S ++ PD FT+ V
Sbjct: 134 GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCV 193
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
+ CA + + VHGL+++ + + + ALV Y G + + Q+FD + ++
Sbjct: 194 IKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNL 253
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVEN----VLPDSITFVGILKACSHCGLVNEGRE 239
WN+MI + +G + ++ + M EN +PD T V +L C+ + G+
Sbjct: 254 VSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKG 313
Query: 240 -HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRI 298
H ++ R + +L ++D+ + G + A MI M +VV W ++
Sbjct: 314 VHGWAVKLR--LDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGGFSA 370
Query: 299 HG 300
G
Sbjct: 371 EG 372
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 89/189 (47%), Gaps = 6/189 (3%)
Query: 48 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 107
V D F N ++ G A ++FD MP R++V+WN++I + N + L
Sbjct: 219 VEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGE 278
Query: 108 MLSAEVE----PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYA 163
M+ + PD T +V+ CAR + K VHG ++ R+ +L+ AL+DMY+
Sbjct: 279 MMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYS 338
Query: 164 KCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEV--ENVLPDSITF 221
KCG I ++ +F +V WN M+ G + G V +M E+V D +T
Sbjct: 339 KCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTI 398
Query: 222 VGILKACSH 230
+ + C H
Sbjct: 399 LNAVPVCFH 407
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 86/181 (47%), Gaps = 4/181 (2%)
Query: 147 RVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVF 206
R++ + +L ++ MYA CG D S+ VFD + ++ WNA+I+ + + L + + F
Sbjct: 115 RLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETF 174
Query: 207 SRM-EVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLG 265
M ++LPD T+ ++KAC+ V G ++ L++ +V G
Sbjct: 175 IEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVG-NALVSFYG 233
Query: 266 RAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGDFVLLSN 325
G + +A + MP E ++V W +++ +G E + + + E+GD + +
Sbjct: 234 THGFVTDALQLFDIMP-ERNLVSWNSMIRVFSDNGFSEESFLLLGEMME-ENGDGAFMPD 291
Query: 326 M 326
+
Sbjct: 292 V 292
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 177/301 (58%), Gaps = 7/301 (2%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D + N++I+ L+KA E AR++FD MP+RD+V+WN+LI GY + + ++LF M+
Sbjct: 182 DVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMV 241
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
+ ++PD S ++ CA+ G K +H KR+ ++ L+ LVD YAKCG ID
Sbjct: 242 ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFID 301
Query: 170 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
+ ++F+ + + WNAMI GLA+HG + F +M + PD +TF+ +L CS
Sbjct: 302 TAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCS 361
Query: 230 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE----PD 285
H GLV+E R F+ M++ + + +++HYG M DLLGRAG +EEA MI+ MP +
Sbjct: 362 HSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREK 421
Query: 286 VVIWRALLSACRIHGKKELAEFA---IANISRLESGDFVLLSNMYCSLKNWHNAERVRNM 342
++ W LL CRIHG E+AE A + +S + G + ++ MY + + W +VR +
Sbjct: 422 LLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREI 481
Query: 343 M 343
+
Sbjct: 482 I 482
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 200/349 (57%), Gaps = 5/349 (1%)
Query: 41 AHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLD 100
H + + V D F +N +I+ K+G D A VF+++ R VVTWN+++ G+ +N ++
Sbjct: 429 GHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVE 488
Query: 101 GLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVD 160
+ LF M + +E + TF +V+ C+ +G+L KWVH ++ +K + AL+D
Sbjct: 489 AISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALID 547
Query: 161 MYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSIT 220
MYAKCG ++ ++ VF ++ + W++MIN +HG AI+ F++M P+ +
Sbjct: 548 MYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVV 607
Query: 221 FVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 280
F+ +L AC H G V EG+ +FN+M++ F + P EH+ +DLL R+G+L+EA IK M
Sbjct: 608 FMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEM 666
Query: 281 PVEPDVVIWRALLSACRIHGKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAE 337
P D +W +L++ CRIH K ++ + ++S + ++G + LLSN+Y W
Sbjct: 667 PFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFR 726
Query: 338 RVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGL 386
R+R+ MK ++K G S IE+ + +F A +++ + I+R L L
Sbjct: 727 RLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 123/233 (52%), Gaps = 3/233 (1%)
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
+ G A KVFD MPVRD+V W+TL+ ++N + LR+F+ M+ VEPD T S
Sbjct: 148 QTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMIS 207
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 182
VV GCA LG L A+ VHG + K L+ L +L+ MY+KCG + S+++F+ +A+ +
Sbjct: 208 VVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKN 267
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
W AMI+ + A+ FS M + P+ +T +L +C GL+ EG+
Sbjct: 268 AVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHG 327
Query: 243 IMQNRFLIQPQLEHYG-TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 294
R L P E +V+L G L + C + + + ++V W +L+S
Sbjct: 328 FAVRREL-DPNYESLSLALVELYAECGKLSD-CETVLRVVSDRNIVAWNSLIS 378
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 132/275 (48%), Gaps = 43/275 (15%)
Query: 15 VHGYA-------TYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 67
VHG+A Y SL AL+ YA C K +C
Sbjct: 325 VHGFAVRRELDPNYESLSLALVELYAECG--------------------------KLSDC 358
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
+ +V R++V WN+LI Y + L LFR M++ ++PD FT AS ++ C
Sbjct: 359 ETVLRVVSD---RNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISAC 415
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 187
G + K +HG ++ V ++ + +L+DMY+K G +D + VF+ + V WN
Sbjct: 416 ENAGLVPLGKQIHGHVIRTDVSDEFVQN-SLIDMYSKSGSVDSASTVFNQIKHRSVVTWN 474
Query: 188 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 247
+M+ G + +G +++AI++F M + + +TF+ +++ACS G + +G+ + ++
Sbjct: 475 SMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGK----WVHHK 530
Query: 248 FLIQ--PQLEHYGTMVDLLGRAGNLEEACNMIKAM 280
+I L ++D+ + G+L A + +AM
Sbjct: 531 LIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAM 565
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 136/263 (51%), Gaps = 8/263 (3%)
Query: 33 ARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGY 92
AR I +F +D N ++ K G+ + ++F+K+ ++ V+W +I Y
Sbjct: 221 ARSVHGQITRKMFD--LDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSY 278
Query: 93 VKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNY 152
+ LR F M+ + +EP+ T SV++ C +G + K VHG + + + NY
Sbjct: 279 NRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNY 338
Query: 153 -ILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEV 211
LS ALV++YA+CG++ + V V+ ++ WN++I+ A G+ + A+ +F +M
Sbjct: 339 ESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVT 398
Query: 212 ENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNL 270
+ + PD+ T + AC + GLV G++ H +++ R + + +++D+ ++G++
Sbjct: 399 QRIKPDAFTLASSISACENAGLVPLGKQIHGHVI--RTDVSDEFVQ-NSLIDMYSKSGSV 455
Query: 271 EEACNMIKAMPVEPDVVIWRALL 293
+ A + + VV W ++L
Sbjct: 456 DSASTVFNQIK-HRSVVTWNSML 477
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 125/268 (46%), Gaps = 8/268 (2%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D +IES G D +R VF+ P D + LI V + L+ ++
Sbjct: 33 DPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLV 92
Query: 110 SAEVEPDGFTFASVVTGCA-RLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
S + F F SV+ CA L VHG +++ V + ++ +L+ MY + G +
Sbjct: 93 SETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNL 152
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
+++VFD + + W+ +++ +G + A+ +F M + V PD++T + +++ C
Sbjct: 153 SDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGC 212
Query: 229 SHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 287
+ G + R H I + F + L +++ + + G+L + + + + + + V
Sbjct: 213 AELGCLRIARSVHGQITRKMFDLDETL--CNSLLTMYSKCGDLLSSERIFEKI-AKKNAV 269
Query: 288 IWRALLSACRIHGKKELAEFAIANISRL 315
W A++S+ + + E +E A+ + S +
Sbjct: 270 SWTAMISS---YNRGEFSEKALRSFSEM 294
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/388 (34%), Positives = 202/388 (52%), Gaps = 35/388 (9%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 67
+ H +I G+ + A+LI+ YA C R+ D+
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANC----------KRIGDS---------------- 279
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
RKVFD+ V W L+ GY N + D L +F GML + P+ TFAS + C
Sbjct: 280 ---RKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSC 336
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 187
+ LG L K +HG+ ++ ++ + + +LV MY+ G ++ + VF + + + WN
Sbjct: 337 SALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWN 396
Query: 188 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 247
++I G A HG A +F +M N PD ITF G+L ACSHCG + +GR+ F M +
Sbjct: 397 SIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSG 456
Query: 248 F-LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG---KKE 303
I +++HY MVD+LGR G L+EA +I+ M V+P+ ++W ALLSACR+H + E
Sbjct: 457 INHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGE 516
Query: 304 LAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSI 363
A AI N+ S +VLLSN+Y S W N ++R MK G+ KK G SW+ +
Sbjct: 517 KAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKK 576
Query: 364 HQFNAADQSHAEMKAIHRVLEGLIQRAK 391
H+F + DQ H I+ LE L ++ K
Sbjct: 577 HEFFSGDQPHCS--RIYEKLEFLREKLK 602
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 143/268 (53%), Gaps = 2/268 (0%)
Query: 48 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 107
V DT + N ++ ++ G+ D A K+F +MP ++V++W T+I G +N R + L LF+
Sbjct: 156 VKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKN 215
Query: 108 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 167
ML ++ F V+T CA A VHGL+++ +SA+L+ YA C R
Sbjct: 216 MLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKR 275
Query: 168 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
I S++VFD + V+VW A+++G +++ DA+++FS M ++LP+ TF L +
Sbjct: 276 IGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNS 335
Query: 228 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 287
CS G ++ G+E + + ++ ++V + +GN+ +A ++ + + +V
Sbjct: 336 CSALGTLDWGKEMHGVAV-KLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIV 393
Query: 288 IWRALLSACRIHGKKELAEFAIANISRL 315
W +++ C HG+ + A + RL
Sbjct: 394 SWNSIIVGCAQHGRGKWAFVIFGQMIRL 421
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 95/183 (51%), Gaps = 8/183 (4%)
Query: 42 HHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDG 101
+ FS ++ ++ ++I + + + D AR+VF+++P V + +I GY ++ R +D
Sbjct: 26 YRSFSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDA 85
Query: 102 LRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDM 161
L LF M +V ++ S+++GC G + A + M E+ V + A+V+
Sbjct: 86 LNLFDEMPVRDV----VSWNSMISGCVECGDMNTAVKLFDEMPERSV----VSWTAMVNG 137
Query: 162 YAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
+ G++D ++++F + + WN+M++G G DA+ +F +M +NV+ +
Sbjct: 138 CFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMI 197
Query: 222 VGI 224
G+
Sbjct: 198 CGL 200
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 90/184 (48%), Gaps = 21/184 (11%)
Query: 167 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 226
RID +++VF+ V HVS++ MI G +DA+ +F M V +V +++ ++
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDV----VSWNSMIS 105
Query: 227 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 286
C CG +N + F+ M R ++ + MV+ R+G +++A + MPV+ D
Sbjct: 106 GCVECGDMNTAVKLFDEMPERSVVS-----WTAMVNGCFRSGKVDQAERLFYQMPVK-DT 159
Query: 287 VIWRALLSACRIHGKKELAEF--AIANISRLESGDFVLLSNMYCSL-KNWHNAERV---R 340
W ++ +HG + + A+ ++ + + + M C L +N + E + +
Sbjct: 160 AAWNSM-----VHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFK 214
Query: 341 NMMK 344
NM++
Sbjct: 215 NMLR 218
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/396 (31%), Positives = 213/396 (53%), Gaps = 18/396 (4%)
Query: 2 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARC----HQPHIAHHVFSRVM--DTFSKN 55
DS + + ++I+ G + + +++ +R H I +V V+ D +
Sbjct: 289 DSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNC 348
Query: 56 LVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEP 115
+I+ K GE ++A VF K +WN +I Y+ + + ++ M+S V+P
Sbjct: 349 SLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKP 408
Query: 116 DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF 175
D TF SV+ C++L AL K +H + E R++ + +L +AL+DMY+KCG + ++F
Sbjct: 409 DVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIF 468
Query: 176 DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVN 235
+++ + V W MI+ HG +A+ F M+ + PD +T + +L AC H GL++
Sbjct: 469 NSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLID 528
Query: 236 EGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD-VVIWRALLS 294
EG + F+ M++++ I+P +EHY M+D+LGRAG L EA +I+ P D + L S
Sbjct: 529 EGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFS 588
Query: 295 ACRIHGKKELAEFAIANISRL-------ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGG 347
AC +H + L + I+RL ++ +++L N+Y S ++W A RVR MK G
Sbjct: 589 ACCLHLEHSLGD----RIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMG 644
Query: 348 VRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVL 383
+RKK G SWIE+ D + F A D+SH + ++ L
Sbjct: 645 LRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECL 680
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 131/255 (51%), Gaps = 7/255 (2%)
Query: 65 GECD---IARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 121
G+CD +AR+VF KMP + +V WN++I GYV + + M+ P T
Sbjct: 254 GKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLT 313
Query: 122 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 181
S++ C+R L + K++HG ++ V + ++ +L+D+Y KCG ++++ VF +D
Sbjct: 314 SILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKD 373
Query: 182 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-H 240
WN MI+ G A+ V+ +M V PD +TF +L ACS + +G++ H
Sbjct: 374 VAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIH 433
Query: 241 FNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
+I ++R L ++D+ + GN +EA + ++P + DVV W ++SA HG
Sbjct: 434 LSISESRLETDELL--LSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISAYGSHG 490
Query: 301 KKELAEFAIANISRL 315
+ A + + +
Sbjct: 491 QPREALYQFDEMQKF 505
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 144/327 (44%), Gaps = 52/327 (15%)
Query: 72 KVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLG 131
+VFD+MP RDV +WNT+I + ++ L LF M S+ EP+ + ++ C+RL
Sbjct: 163 QVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLL 222
Query: 132 ALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMIN 191
L K +H ++K +L+ +++ALVDMY KC ++V+++VF + R + WN+MI
Sbjct: 223 WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIK 282
Query: 192 GLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH--------------------- 230
G G + + + +RM +E P T IL ACS
Sbjct: 283 GYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNA 342
Query: 231 --------------CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM 276
CG N F+ Q + E + M+ GN +A +
Sbjct: 343 DIYVNCSLIDLYFKCGEANLAETVFSKTQ-----KDVAESWNVMISSYISVGNWFKAVEV 397
Query: 277 IKAM---PVEPDVVIWRALLSACRIHGKKELAEFAIANI--SRLESGDFVL--LSNMYCS 329
M V+PDVV + ++L AC E + +I SRLE+ + +L L +MY
Sbjct: 398 YDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSK 457
Query: 330 LKNWHNAERVRNMMKIGGVRKKRGKSW 356
N A R+ N + KK SW
Sbjct: 458 CGNEKEAFRIFN-----SIPKKDVVSW 479
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 120/229 (52%), Gaps = 10/229 (4%)
Query: 70 ARKVFDKMPVR-DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV-EPDGFTFASVVTGC 127
AR VF+ +R DV WN+L+ GY KN F D L +F+ +L+ + PD FTF +V+
Sbjct: 58 ARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAY 117
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 187
LG + +H L+++ + +++++LV MYAK + S QVFD + V+ WN
Sbjct: 118 GALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWN 177
Query: 188 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQN 246
+I+ G A A+ +F RME P+S++ + ACS + G+E H ++
Sbjct: 178 TVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKK 237
Query: 247 RFLIQPQLEHY--GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
F +L+ Y +VD+ G+ LE A + + MP +V W +++
Sbjct: 238 GF----ELDEYVNSALVDMYGKCDCLEVAREVFQKMP-RKSLVAWNSMI 281
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 181/321 (56%), Gaps = 5/321 (1%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
A+ VFD+M ++VV+W ++ GY + R + +++F M + ++PD +T ++ CA
Sbjct: 324 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACAN 383
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-ARDHVSVWNA 188
+ +L HG + + +S +LV +Y KCG ID S ++F+ + RD VS W A
Sbjct: 384 VSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS-WTA 442
Query: 189 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 248
M++ A G A++ I +F +M + PD +T G++ ACS GLV +G+ +F +M + +
Sbjct: 443 MVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEY 502
Query: 249 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFA 308
I P + HY M+DL R+G LEEA I MP PD + W LLSACR G E+ ++A
Sbjct: 503 GIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWA 562
Query: 309 IANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQ 365
++ L+ + LLS++Y S W + ++R M+ V+K+ G+SWI+ +H
Sbjct: 563 AESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHS 622
Query: 366 FNAADQSHAEMKAIHRVLEGL 386
F+A D+S + I+ LE L
Sbjct: 623 FSADDESSPYLDQIYAKLEEL 643
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 144/300 (48%), Gaps = 13/300 (4%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAG 65
+ H ++I G+ +Y + + L+ YA A VF + D T N ++ L+ G
Sbjct: 160 QIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACG 219
Query: 66 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 125
+ A ++F M +D V+W +I G +N + + FR M ++ D + F SV+
Sbjct: 220 MIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLP 278
Query: 126 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 185
C LGA+ K +H ++ + + + +AL+DMY KC + +K VFD + + +V
Sbjct: 279 ACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS 338
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 245
W AM+ G G A +A+ +F M+ + PD T + AC++ + EG +
Sbjct: 339 WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA- 397
Query: 246 NRFLIQPQLEHYGT----MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
I L HY T +V L G+ G+++++ + M V D V W A++SA G+
Sbjct: 398 ----ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSAYAQFGR 452
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 146/329 (44%), Gaps = 57/329 (17%)
Query: 14 IVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGECDIAR 71
IVH YA S STYAR VF R+ + FS N ++ + KAG
Sbjct: 47 IVHAYALMKS------STYAR--------RVFDRIPQPNLFSWNNLLLAYSKAGLISEME 92
Query: 72 KVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML---SAEVEPDGFTFASVVTGCA 128
F+K+P RD VTWN LI GY + ++ + M+ SA + T +++ +
Sbjct: 93 STFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTR--VTLMTMLKLSS 150
Query: 129 RLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK------------------------ 164
G + K +HG +++ + ++ + L+ MYA
Sbjct: 151 SNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNS 210
Query: 165 -------CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPD 217
CG I+ + Q+F + +D VS W AMI GLA +GLA +AI F M+V+ + D
Sbjct: 211 LMGGLLACGMIEDALQLFRGMEKDSVS-WAAMIKGLAQNGLAKEAIECFREMKVQGLKMD 269
Query: 218 SITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM 276
F +L AC G +NEG++ H I++ F Q + ++D+ + L A +
Sbjct: 270 QYPFGSVLPACGGLGAINEGKQIHACIIRTNF--QDHIYVGSALIDMYCKCKCLHYAKTV 327
Query: 277 IKAMPVEPDVVIWRALLSACRIHGKKELA 305
M + +VV W A++ G+ E A
Sbjct: 328 FDRMK-QKNVVSWTAMVVGYGQTGRAEEA 355
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 101/225 (44%), Gaps = 32/225 (14%)
Query: 6 AAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAG 65
++ H K I G Y ++ +L++ Y +C G
Sbjct: 390 GSQFHGKAITSGLIHYVTVSNSLVTLYGKC-----------------------------G 420
Query: 66 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 125
+ D + ++F++M VRD V+W ++ Y + R ++ ++LF M+ ++PDG T V++
Sbjct: 421 DIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVIS 480
Query: 126 GCARLGALCNAKWVHGLMLEKRVKLNYI-LSAALVDMYAKCGRIDVSKQVFDTVARDHVS 184
C+R G + + LM + + I + ++D++++ GR++ + + + + +
Sbjct: 481 ACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDA 540
Query: 185 V-WNAMINGLAVHG-LALDAIAVFSRMEVENVLPDSITFVGILKA 227
+ W +++ G L + A S +E++ P T + + A
Sbjct: 541 IGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYA 585
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/330 (35%), Positives = 188/330 (56%), Gaps = 3/330 (0%)
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
D+ K+ +K +VV+W + G KN F + L++F M V P+ T ++++
Sbjct: 347 DVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL 406
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 187
L L + K VHG L K + + ++ ALVDMY K G + + ++F + ++ WN
Sbjct: 407 GCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWN 466
Query: 188 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 247
M+ G A+ G + IA FS M + PD+ITF +L C + GLV EG ++F++M++R
Sbjct: 467 CMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSR 526
Query: 248 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEF 307
+ I P +EH MVDLLGR+G L+EA + I+ M ++PD IW A LS+C+IH ELAE
Sbjct: 527 YGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEI 586
Query: 308 AIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIH 364
A + LE S +++++ N+Y +L W + ER+RN+M+ VR + SWI++ ++H
Sbjct: 587 AWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVH 646
Query: 365 QFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
F A ++H + I+ L L+ K G
Sbjct: 647 IFYAEGKTHPDEGDIYFELYKLVSEMKKSG 676
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 141/299 (47%), Gaps = 39/299 (13%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDT--FSKNLVIESLMKAG 65
+ H ++ G + S+ +LI Y+R + ++ VF+ + D S N ++ S K G
Sbjct: 110 QIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLG 169
Query: 66 ECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 121
D A + D+M + D+VTWN+L+ GY D + + + M A ++P + +
Sbjct: 170 YVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSIS 229
Query: 122 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 181
S++ A G L K +HG +L ++ + + L+DMY K G + ++ VFD +
Sbjct: 230 SLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK 289
Query: 182 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 241
++ WN++++GL+ L DA A+ RME E + PD+IT+ + + G
Sbjct: 290 NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLG--------- 340
Query: 242 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
+P+ +D++G+ +K V P+VV W A+ S C +G
Sbjct: 341 ---------KPE-----KALDVIGK----------MKEKGVAPNVVSWTAIFSGCSKNG 375
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 135/291 (46%), Gaps = 42/291 (14%)
Query: 44 VFSRVMDTFSKNLVIESLMKAGEC---DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLD 100
+ R +D +V S+ G C A K+FD+MP RD + WN ++ +++ +
Sbjct: 13 LIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEK 72
Query: 101 GLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVD 160
+ LFR M + + T ++ C+ + +HG +L ++ N + +L+
Sbjct: 73 AVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIV 132
Query: 161 MYAKCGRIDVSKQVFDTVARDHVS-----------------------------------V 185
MY++ G++++S++VF+++ ++S
Sbjct: 133 MYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVT 192
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIM 244
WN++++G A GL+ DAIAV RM++ + P + + +L+A + G + G+ H I+
Sbjct: 193 WNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYIL 252
Query: 245 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
+N+ +E T++D+ + G L A M+ M ++V W +L+S
Sbjct: 253 RNQLWYDVYVET--TLIDMYIKTGYLPYA-RMVFDMMDAKNIVAWNSLVSG 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 83/168 (49%), Gaps = 6/168 (3%)
Query: 48 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 107
+ D + +++ K+G+ A ++F + + + +WN ++ GY R +G+ F
Sbjct: 428 ICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSV 487
Query: 108 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS--AALVDMYAKC 165
ML A +EPD TF SV++ C G L W + ++ R + + + +VD+ +
Sbjct: 488 MLEAGMEPDAITFTSVLSVCKNSG-LVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRS 546
Query: 166 GRIDVSKQVFDTVA-RDHVSVWNAMINGLAVH-GLALDAIAVFSRMEV 211
G +D + T++ + ++W A ++ +H L L IA + R++V
Sbjct: 547 GYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIA-WKRLQV 593
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 188/341 (55%), Gaps = 8/341 (2%)
Query: 52 FSKNLVIESLM-----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR 106
F ++V+E+ + + G+ A +FD+M ++V++WN++I YV+N + L LF+
Sbjct: 361 FLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQ 420
Query: 107 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 166
+ + + PD T AS++ A +L + +H +++ R N I+ +LV MYA CG
Sbjct: 421 ELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCG 480
Query: 167 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 226
++ +++ F+ + V WN++I AVHG ++ +FS M V P+ TF +L
Sbjct: 481 DLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLA 540
Query: 227 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 286
ACS G+V+EG E+F M+ + I P +EHYG M+DL+GR GN A ++ MP P
Sbjct: 541 ACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTA 600
Query: 287 VIWRALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMM 343
IW +LL+A R H +AEFA I ++E +G +VLL NMY W + R++ +M
Sbjct: 601 RIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLM 660
Query: 344 KIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLE 384
+ G+ + +S +E H F D+SH I+ VL+
Sbjct: 661 ESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLD 701
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 148/287 (51%), Gaps = 12/287 (4%)
Query: 20 TYPSLVAAL--ISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKM 77
TYP ++ ++ IS+ + H V D + N +I MK G A KVF++M
Sbjct: 132 TYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEM 191
Query: 78 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 137
P RD+V+WN++I GY+ L LF+ ML +PD F+ S + C+ + + K
Sbjct: 192 PERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGK 251
Query: 138 WVHGLMLEKRVKL-NYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 196
+H + R++ + ++ +++DMY+K G + ++++F+ + + ++ WN MI A +
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARN 311
Query: 197 GLALDAIAVFSRMEVENVL-PDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQL 254
G DA F +M +N L PD IT + +L A + + EGR H M+ FL P +
Sbjct: 312 GRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFL--PHM 365
Query: 255 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
++D+ G G L+ A + M E +V+ W ++++A +GK
Sbjct: 366 VLETALIDMYGECGQLKSAEVIFDRM-AEKNVISWNSIIAAYVQNGK 411
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 135/263 (51%), Gaps = 11/263 (4%)
Query: 42 HHVFSRVM--DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFL 99
H V SR+ D +++ K GE A ++F+ M R++V WN +IG Y +N R
Sbjct: 256 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVT 315
Query: 100 DGLRLFRGMLSAE-VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAAL 158
D F+ M ++PD T +++ A+ + +HG + + + +L AL
Sbjct: 316 DAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETAL 371
Query: 159 VDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDS 218
+DMY +CG++ ++ +FD +A +V WN++I +G A+ +F + +++PDS
Sbjct: 372 IDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDS 431
Query: 219 ITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMI 277
T IL A + ++EGRE H I+++R+ + ++V + G+LE+A
Sbjct: 432 TTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII--LNSLVHMYAMCGDLEDARKCF 489
Query: 278 KAMPVEPDVVIWRALLSACRIHG 300
+ ++ DVV W +++ A +HG
Sbjct: 490 NHILLK-DVVSWNSIIMAYAVHG 511
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 114/233 (48%), Gaps = 3/233 (1%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
A ++FD+M D WN +I G+ +++ ++ + M+ A V+ D FT+ V+ A
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 189
+ +L K +H ++++ + + +L+ +Y K G +++VF+ + + WN+M
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 190 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRF 248
I+G G ++ +F M PD + + L ACSH G+E H + +++R
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR- 261
Query: 249 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
+ + +++D+ + G + A + M ++ ++V W ++ +G+
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIGCYARNGR 313
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/338 (35%), Positives = 187/338 (55%), Gaps = 7/338 (2%)
Query: 27 ALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVT 84
+I Y + A +FS + D S N+++ G ++AR F+K P + V+
Sbjct: 317 TMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS 376
Query: 85 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 144
WN++I Y KN + + + LF M +PD T S+++ L L +H +++
Sbjct: 377 WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVV 436
Query: 145 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNAMINGLAVHGLALDAI 203
K V + + AL+ MY++CG I S+++FD + + V WNAMI G A HG A +A+
Sbjct: 437 -KTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEAL 495
Query: 204 AVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDL 263
+F M+ + P ITFV +L AC+H GLV+E + F M + + I+PQ+EHY ++V++
Sbjct: 496 NLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNV 555
Query: 264 LGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE---SGDF 320
G EEA +I +MP EPD +W ALL ACRI+ LA A +SRLE S +
Sbjct: 556 TSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPY 615
Query: 321 VLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIE 358
VLL NMY + W A +VR M+ ++K+RG SW++
Sbjct: 616 VLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 126/306 (41%), Gaps = 69/306 (22%)
Query: 14 IVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMD------------TFSKNLV---- 57
+V+ Y T LI Y + Q A +F ++ D F KN+V
Sbjct: 234 LVYAYNT-------LIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNS 286
Query: 58 -IESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 116
I++ +K G+ AR +FD+M RD ++WNT+I GYV R D LF M + D
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR----D 342
Query: 117 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 176
++ +V+G YA G +++++ F+
Sbjct: 343 AHSWNMMVSG-----------------------------------YASVGNVELARHYFE 367
Query: 177 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVN- 235
H WN++I + +A+ +F RM +E PD T +L A + GLVN
Sbjct: 368 KTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST--GLVNL 425
Query: 236 -EGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 294
G + I+ + P + + ++ + R G + E+ + M ++ +V+ W A++
Sbjct: 426 RLGMQMHQIVVKTVI--PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIG 483
Query: 295 ACRIHG 300
HG
Sbjct: 484 GYAFHG 489
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 107/255 (41%), Gaps = 65/255 (25%)
Query: 41 AHHVFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVK--NV 96
A +F ++ +T + N +I +K E + ARK+FD MP RDVVTWNT+I GYV +
Sbjct: 59 ARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGI 118
Query: 97 RFLDGLR-LFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS 155
RFL+ R LF M S D F++ ++++G
Sbjct: 119 RFLEEARKLFDEMPSR----DSFSWNTMISG----------------------------- 145
Query: 156 AALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL 215
YAK RI + +F+ + + W+AMI G +G A+ +F +M V++
Sbjct: 146 ------YAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSS 199
Query: 216 PDSITFVGILK---------ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGR 266
P G++K G + GRE + Y T++ G+
Sbjct: 200 PLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDL------------VYAYNTLIVGYGQ 247
Query: 267 AGNLEEACNMIKAMP 281
G +E A + +P
Sbjct: 248 RGQVEAARCLFDQIP 262
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 126/288 (43%), Gaps = 29/288 (10%)
Query: 27 ALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGECDIARKVFDKMPVRDVVT 84
+IS YA+ + A +F ++ + S + +I + GE D A +F KMPV+D
Sbjct: 141 TMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP 200
Query: 85 WNTLIGGYVKNVRFLDGLRLF--RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWV--- 139
L+ G +KN R + + G L + E + + +++ G + G + A+ +
Sbjct: 201 LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQ 260
Query: 140 --------HGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNAMI 190
HG +R N + +++ Y K G + ++ +FD + RD +S WN MI
Sbjct: 261 IPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTIS-WNTMI 319
Query: 191 NGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLI 250
+G DA A+FS M D+ ++ ++ + G V R +F + +
Sbjct: 320 DGYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTV 375
Query: 251 QPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE---PDVVIWRALLSA 295
+ +++ + + +EA ++ M +E PD +LLSA
Sbjct: 376 S-----WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSA 418
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 189/338 (55%), Gaps = 6/338 (1%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N +I K D A +F +P ++V++W ++I G N R + L R M ++
Sbjct: 437 NNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQ 495
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
P+ T + + CAR+GAL K +H +L V L+ L AL+DMY +CGR++ +
Sbjct: 496 PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQ 555
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
F++ +D V+ WN ++ G + G + +F RM V PD ITF+ +L CS +V
Sbjct: 556 FNSQKKD-VTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMV 614
Query: 235 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 294
+G +F+ M++ + + P L+HY +VDLLGRAG L+EA I+ MPV PD +W ALL+
Sbjct: 615 RQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLN 673
Query: 295 ACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKK 351
ACRIH K +L E + +I L+ G ++LL N+Y W +VR MMK G+
Sbjct: 674 ACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVD 733
Query: 352 RGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQR 389
G SW+E+ +H F + D+ H + K I+ VLEG ++
Sbjct: 734 AGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEK 771
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 142/288 (49%), Gaps = 12/288 (4%)
Query: 20 TYPSLVAAL--ISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKM 77
T+P ++ I AR + H+ + +D N +I +K G+ AR +FD+M
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRM 257
Query: 78 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 137
P RD+++WN +I GY +N +GL LF M V+PD T SV++ C LG +
Sbjct: 258 PRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGR 317
Query: 138 WVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHG 197
+H ++ ++ + +L MY G ++++F + R + W MI+G +
Sbjct: 318 DIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNF 377
Query: 198 LALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHY 257
L AI + M+ ++V PD IT +L AC+ G ++ G E ++ I+ +L Y
Sbjct: 378 LPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE-----LHKLAIKARLISY 432
Query: 258 ----GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
++++ + +++A ++ +P +V+ W ++++ R++ +
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLNNR 479
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 119/243 (48%), Gaps = 5/243 (2%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML-SAEV 113
N + ++ G A VF KM R++ +WN L+GGY K F + + L+ ML V
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 114 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 173
+PD +TF V+ C + L K VH ++ +L+ + AL+ MY KCG + ++
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 174 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 233
+FD + R + WNAMI+G +G+ + + +F M +V PD +T ++ AC G
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 234 VNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 292
GR+ H ++ F + + ++ + AG+ EA + M D+V W +
Sbjct: 313 RRLGRDIHAYVITTGFAVDISV--CNSLTQMYLNAGSWREAEKLFSRME-RKDIVSWTTM 369
Query: 293 LSA 295
+S
Sbjct: 370 ISG 372
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 128/251 (50%), Gaps = 6/251 (2%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N + + + AG A K+F +M +D+V+W T+I GY N + +R M V+
Sbjct: 336 NSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK 395
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
PD T A+V++ CA LG L +H L ++ R+ I++ L++MY+KC ID + +
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDI 455
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
F + R +V W ++I GL ++ +A+ +M++ + P++IT L AC+ G +
Sbjct: 456 FHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM-TLQPNAITLTAALAACARIGAL 514
Query: 235 NEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
G+E H ++++ + L + ++D+ R G + A + + + DV W LL
Sbjct: 515 MCGKEIHAHVLRTGVGLDDFLPN--ALLDMYVRCGRMNTAWSQFNSQ--KKDVTSWNILL 570
Query: 294 SACRIHGKKEL 304
+ G+ +
Sbjct: 571 TGYSERGQGSM 581
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 180/311 (57%), Gaps = 14/311 (4%)
Query: 57 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 116
+I+ K G+ AR +FD MP R +V+WN++I GY +N + L +F ML + PD
Sbjct: 257 LIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPD 316
Query: 117 GFTF-----ASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
TF AS++ GC++LG + +H + + + + ALV+MYAK G + +
Sbjct: 317 KVTFLSVIRASMIQGCSQLG-----QSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESA 371
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM-EVENVLPDSITFVGILKACSH 230
K+ F+ + + W +I GLA HG +A+++F RM E N PD IT++G+L ACSH
Sbjct: 372 KKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSH 431
Query: 231 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 290
GLV EG+ +F M++ ++P +EHYG MVD+L RAG EEA ++K MPV+P+V IW
Sbjct: 432 IGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWG 491
Query: 291 ALLSACRIHGKKELAE---FAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGG 347
ALL+ C IH EL + +A L SG +VLLSN+Y W + + +R MK
Sbjct: 492 ALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKR 551
Query: 348 VRKKRGKSWIE 358
V K G S +E
Sbjct: 552 VDKVLGHSSVE 562
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 138/296 (46%), Gaps = 18/296 (6%)
Query: 18 YATYPSLVAALIS----TYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKV 73
Y T+P ++ A + C + F ++ + ++ M GE + +V
Sbjct: 107 YFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFE--VNMYVSTCLLHMYMCCGEVNYGLRV 164
Query: 74 FDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGAL 133
F+ +P +VV W +LI G+V N RF D + FR M S V+ + ++ C R +
Sbjct: 165 FEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDI 224
Query: 134 CNAKWVHGLM--------LEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 185
KW HG + + +V N IL+ +L+DMYAKCG + ++ +FD + +
Sbjct: 225 VTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVS 284
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIM 244
WN++I G + +G A +A+ +F M + PD +TF+ +++A G G+ H +
Sbjct: 285 WNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVS 344
Query: 245 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
+ F+ + +V++ + G+ E A + + + D + W ++ HG
Sbjct: 345 KTGFVKDAAI--VCALVNMYAKTGDAESAKKAFEDLE-KKDTIAWTVVIIGLASHG 397
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 111/244 (45%), Gaps = 10/244 (4%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
AR VF+ + V WN++I GY + L ++ ML PD FTF V+ C+
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 189
L + VHG +++ ++N +S L+ MY CG ++ +VF+ + + +V W ++
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179
Query: 190 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 249
I+G + DAI F M+ V + V +L AC C + G+ +Q
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQG-LG 238
Query: 250 IQPQLEHY--------GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
P + +++D+ + G+L A + MP E +V W ++++ +G
Sbjct: 239 FDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMP-ERTLVSWNSIITGYSQNGD 297
Query: 302 KELA 305
E A
Sbjct: 298 AEEA 301
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 132 ALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR---IDVSKQVFDTVARDHVSVWNA 188
+L +HGLM++ V N I + L+D C + ++ VF+++ V +WN+
Sbjct: 18 SLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNS 77
Query: 189 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
MI G + A+ + M + PD TF +LKACS
Sbjct: 78 MIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACS 118
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 205/396 (51%), Gaps = 35/396 (8%)
Query: 4 TTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMK 63
TT + HA +I G+ + ++ +++ Y RC
Sbjct: 230 TTGKQIHASVIKRGFQSNLPVMNSILDLYCRC---------------------------- 261
Query: 64 AGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 123
G A+ F +M +D++TWNTLI ++ + L +F+ S P+ +TF S+
Sbjct: 262 -GYLSEAKHYFHEMEDKDLITWNTLISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSL 319
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF-DTVARDH 182
V CA + AL + +HG + + N L+ AL+DMYAKCG I S++VF + V R +
Sbjct: 320 VAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRN 379
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
+ W +M+ G HG +A+ +F +M + PD I F+ +L AC H GLV +G ++FN
Sbjct: 380 LVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFN 439
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 302
+M++ + I P + Y +VDLLGRAG + EA +++ MP +PD W A+L AC+ H
Sbjct: 440 VMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHN 499
Query: 303 EL-AEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIE 358
L + A + L+ G +V+LS +Y + W + RVR MM++ G +K+ G SWI
Sbjct: 500 GLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWIL 559
Query: 359 LGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
+ + + F +D+ +++ VL LI+ + G
Sbjct: 560 VENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAG 595
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 135/293 (46%), Gaps = 21/293 (7%)
Query: 42 HHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDG 101
HH+ + NL++ S + G + AR +FD+MP RDVV W +I GY +
Sbjct: 44 HHILA-------TNLIV-SYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARA 95
Query: 102 LRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDM 161
F M+ P+ FT +SV+ C + L VHG++++ ++ + + A+++M
Sbjct: 96 WECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNM 155
Query: 162 YAKCG-RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVEN--VLPDS 218
YA C ++ + +F + + W +I G G + + ++ +M +EN V P
Sbjct: 156 YATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYC 215
Query: 219 ITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMI 277
IT ++A + V G++ H ++++ F Q L +++DL R G L EA +
Sbjct: 216 ITIA--VRASASIDSVTTGKQIHASVIKRGF--QSNLPVMNSILDLYCRCGYLSEAKHYF 271
Query: 278 KAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGDFVLLSNMYCSL 330
M + D++ W L+S E A+ R ES FV + SL
Sbjct: 272 HEME-DKDLITWNTLISELERSDSSE----ALLMFQRFESQGFVPNCYTFTSL 319
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 189/360 (52%), Gaps = 32/360 (8%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 67
+ H +I + +V+ LI+ Y+ C + I+ +F ++
Sbjct: 437 QIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINEL--------------- 481
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM-LSAEVEPDGFTFASVVTG 126
D+ WN++I G+ N+ L LFR M +A + P+ +FA+V++
Sbjct: 482 -------------DIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSS 528
Query: 127 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 186
C+RL +L + + HGL+++ + + AL DMY KCG ID ++Q FD V R + +W
Sbjct: 529 CSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIW 588
Query: 187 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 246
N MI+G +G +A+ ++ +M PD ITFV +L ACSH GLV G E + MQ
Sbjct: 589 NEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQR 648
Query: 247 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAE 306
I+P+L+HY +VD LGRAG LE+A + +A P + V+W LLS+CR+HG LA
Sbjct: 649 IHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLAR 708
Query: 307 FAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSI 363
+ RL+ S +VLLSN Y SL+ W ++ ++ +M V K G+SW G+ +
Sbjct: 709 RVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGNDL 768
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 130/247 (52%), Gaps = 11/247 (4%)
Query: 57 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 116
V+ + ++G+ + R++F +P V WN ++ GY + + + FR M ++PD
Sbjct: 356 VLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPD 415
Query: 117 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 176
T + +++ CARL L K +HG+++ + N + + L+ +Y++C ++++S+ +FD
Sbjct: 416 KTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFD 475
Query: 177 TVARD-HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL-PDSITFVGILKACSH-CGL 233
+ ++ WN+MI+G + L A+ +F RM VL P+ +F +L +CS C L
Sbjct: 476 DCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSL 535
Query: 234 VNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
++ + H ++++ ++ +E + D+ + G ++ A A+ + + VIW +
Sbjct: 536 LHGRQFHGLVVKSGYVSDSFVET--ALTDMYCKCGEIDSARQFFDAV-LRKNTVIWNEM- 591
Query: 294 SACRIHG 300
IHG
Sbjct: 592 ----IHG 594
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 148/322 (45%), Gaps = 15/322 (4%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAGEC 67
H ++ G + L L+ Y C A VF V D +S N + K G+
Sbjct: 29 HGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDL 88
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
A +VFD MP RDVV+WN +I V+ L +++ M+ P FT ASV++ C
Sbjct: 89 GEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSAC 148
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI-DVSKQVFDTVARDHVSVW 186
+++ HG+ ++ + N + AL+ MYAKCG I D +VF+++++ + +
Sbjct: 149 SKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSY 208
Query: 187 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL------KACSHCGLV--NEGR 238
A+I GLA L+A+ +F M + V DS+ IL + C + NE
Sbjct: 209 TAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELG 268
Query: 239 EHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRI 298
+ + + R L +++++ + ++ A + MP E +VV W ++
Sbjct: 269 KQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMP-EVNVVSWNIMIVG--- 324
Query: 299 HGKKELAEFAIANISRLESGDF 320
G++ ++ ++ ++R+ F
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGF 346
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 110/241 (45%), Gaps = 17/241 (7%)
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT-- 125
D +VF+ + + V++ +IGG + + L+ +++FR M V+ D +++++
Sbjct: 191 DYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSIS 250
Query: 126 ----GCARLGALCN---AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV 178
GC L + K +H L L + L+ +L+++YAK ++ ++ +F +
Sbjct: 251 APREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEM 310
Query: 179 ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR 238
+V WN MI G + ++ +RM P+ +T + +L AC G V GR
Sbjct: 311 PEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR 370
Query: 239 EHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSA 295
F+ + QP + + M+ + EEA + + M ++PD +LS+
Sbjct: 371 RIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSS 425
Query: 296 C 296
C
Sbjct: 426 C 426
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 102/248 (41%), Gaps = 36/248 (14%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D N ++E K + + A +F +MP +VV+WN +I G+ + R + M
Sbjct: 283 DLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMR 342
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
+ +P+ T SV+ C R G ++
Sbjct: 343 DSGFQPNEVTCISVLGACFR-----------------------------------SGDVE 367
Query: 170 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
+++F ++ + VS WNAM++G + + +AI+ F +M+ +N+ PD T IL +C+
Sbjct: 368 TGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCA 427
Query: 230 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 289
+ G++ ++ R I ++ + +E + + E D+ W
Sbjct: 428 RLRFLEGGKQIHGVVI-RTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACW 486
Query: 290 RALLSACR 297
+++S R
Sbjct: 487 NSMISGFR 494
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/358 (35%), Positives = 191/358 (53%), Gaps = 13/358 (3%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDI 69
H +LI G+ + ++ Y + A VF + + +N+V+ +LM G CD
Sbjct: 125 HGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSE---RNVVVWNLMIRGFCDS 181
Query: 70 AR-----KVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVV 124
+F +M R +V+WN++I K R + L LF M+ +PD T +V+
Sbjct: 182 GDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVL 241
Query: 125 TGCARLGALCNAKWVHGLMLEKRVKLNYI-LSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
A LG L KW+H + ++I + ALVD Y K G ++ + +F + R +V
Sbjct: 242 PISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNV 301
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRM-EVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
WN +I+G AV+G I +F M E V P+ TF+G+L CS+ G V G E F
Sbjct: 302 VSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFG 361
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 302
+M RF ++ + EHYG MVDL+ R+G + EA +K MPV + +W +LLSACR HG
Sbjct: 362 LMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDV 421
Query: 303 ELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWI 357
+LAE A + ++E SG++VLLSN+Y W + E+VR +MK +RK G+S I
Sbjct: 422 KLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 117/269 (43%), Gaps = 32/269 (11%)
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
D A +VF + +V+ +N +I Y L+ L F M S + D +T+A ++ C
Sbjct: 53 DYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSC 112
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 187
+ L L K VHG ++ + +V++Y GR+ +++VFD ++ +V VWN
Sbjct: 113 SSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWN 172
Query: 188 AMING-------------------------------LAVHGLALDAIAVFSRMEVENVLP 216
MI G L+ G +A+ +F M + P
Sbjct: 173 LMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDP 232
Query: 217 DSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM 276
D T V +L + G+++ G+ + ++ L + + +VD ++G+LE A +
Sbjct: 233 DEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAI 292
Query: 277 IKAMPVEPDVVIWRALLSACRIHGKKELA 305
+ M +VV W L+S ++GK E
Sbjct: 293 FRKMQ-RRNVVSWNTLISGSAVNGKGEFG 320
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/336 (37%), Positives = 190/336 (56%), Gaps = 7/336 (2%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS-AEV 113
N ++++ K+G+ AR VFD+M RDVVTW+++I GYVK + L +F M+
Sbjct: 178 NSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSS 237
Query: 114 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 173
+ + T SV+ CA LGAL K VH +L+ + L IL +L+DMYAKCG I +
Sbjct: 238 KANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWS 297
Query: 174 VF--DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 231
VF +V +WNA+I GLA HG +++ +F +M + PD ITF+ +L ACSH
Sbjct: 298 VFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHG 357
Query: 232 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 291
GLV E F ++ +P+ EHY MVD+L RAG +++A + I MP++P + A
Sbjct: 358 GLVKEAWHFFKSLKESG-AEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGA 416
Query: 292 LLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGV 348
LL+ C HG ELAE + L+ G +V L+N+Y K + A +R M+ GV
Sbjct: 417 LLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGV 476
Query: 349 RKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLE 384
+K G S ++L + H+F A D++H I+ VL+
Sbjct: 477 KKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQ 512
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 129/307 (42%), Gaps = 38/307 (12%)
Query: 53 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 112
S+ L +L +G+ D A K K+ WN +I G+ + + ++ ML
Sbjct: 44 SQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFG 103
Query: 113 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 172
+ PD T+ ++ +RL +H +++ ++ + + L+ MY ++
Sbjct: 104 LLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASAR 163
Query: 173 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLP---------------- 216
++FD + ++ WN++++ A G + A VF M +V+
Sbjct: 164 KLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNK 223
Query: 217 ----------------DSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGT 259
+ +T V ++ AC+H G +N G+ H I+ + L+ +
Sbjct: 224 ALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQ--TS 281
Query: 260 MVDLLGRAGNLEEACNMI-KAMPVEPDVVIWRALLSACRIHG--KKELAEFAIANISRLE 316
++D+ + G++ +A ++ +A E D ++W A++ HG ++ L F S+++
Sbjct: 282 LIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKID 341
Query: 317 SGDFVLL 323
+ L
Sbjct: 342 PDEITFL 348
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/388 (32%), Positives = 195/388 (50%), Gaps = 13/388 (3%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFS--RVMDTFSKNLVIESLMKAGEC 67
HA ++ +G+++ +++S Y + A V+ S N +I++ MK GE
Sbjct: 228 HAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGET 287
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
+ A +VF P +++VTW T+I GY +N LR F M+ + V+ D F + +V+ C
Sbjct: 288 EKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHAC 347
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 187
+ L L + K +HG ++ + + ALV++YAKCG I + + F +A + WN
Sbjct: 348 SGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWN 407
Query: 188 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 247
M+ VHGLA A+ ++ M + PD++TF+G+L CSH GLV EG F M
Sbjct: 408 TMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKD 467
Query: 248 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV----EPDVVIWRALLSACRIHGKKE 303
+ I +++H M+D+ GR G+L EA ++ + W LL AC H E
Sbjct: 468 YRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTE 527
Query: 304 LAE-----FAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIE 358
L IA S E FVLLSN+YCS W E VR M G++K G SWIE
Sbjct: 528 LGREVSKVLKIAEPS--EEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIE 585
Query: 359 LGDSIHQFNAADQSHAEMKAIHRVLEGL 386
+G+ + F D SH ++ + L L
Sbjct: 586 VGNQVSTFVVGDSSHPRLEELSETLNCL 613
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 138/339 (40%), Gaps = 48/339 (14%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLV-----IESLM 62
K + +I G+ + +LI Y +C A+ VF R M S+N V + + M
Sbjct: 91 KIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVF-RDMCCDSRNEVTWCSLLFAYM 149
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
A + + A VF +MP R WN +I G+ + L LF+ ML +E +PD +TF+S
Sbjct: 150 NAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSS 209
Query: 123 VVTGC-ARLGALCNAKWVHGLM-------------------------------LEKRVKL 150
++ C A + + VH +M LE L
Sbjct: 210 LMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVL 269
Query: 151 NYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRME 210
+ +++D K G + + +VF ++ W MI G +G A+ F M
Sbjct: 270 TQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMM 329
Query: 211 VENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG----TMVDLLGR 266
V D + +L ACS L+ G+ M + LI + Y +V+L +
Sbjct: 330 KSGVDSDHFAYGAVLHACSGLALLGHGK-----MIHGCLIHCGFQGYAYVGNALVNLYAK 384
Query: 267 AGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
G+++EA + D+V W +L A +HG + A
Sbjct: 385 CGDIKEADRAFGDI-ANKDLVSWNTMLFAFGVHGLADQA 422
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 129/283 (45%), Gaps = 38/283 (13%)
Query: 58 IESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDG 117
I SL K+G AR+VFD MP D V WNT++ Y + + + LF + ++ +PD
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 118 FTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDT 177
++F ++++ CA LG + + + L++ + ++ +L+DMY KC + +VF
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 178 V---ARDHVS------------------------------VWNAMINGLAVHGLALDAIA 204
+ +R+ V+ WN MI+G A G ++
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLS 190
Query: 205 VFSRMEVENVLPDSITFVGILKACS-HCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVD 262
+F M PD TF ++ ACS V GR H +++N + +E +++
Sbjct: 191 LFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGW--SSAVEAKNSVLS 248
Query: 263 LLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
+ G+ ++A ++++ V V W +++ AC G+ E A
Sbjct: 249 FYTKLGSRDDAMRELESIEVLTQVS-WNSIIDACMKIGETEKA 290
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 179/342 (52%), Gaps = 3/342 (0%)
Query: 48 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 107
V++ F + +I+ K G ++A KVF M ++V WN++I Y +N + LF
Sbjct: 508 VLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNL 567
Query: 108 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 167
MLS + PD + SV+ + +L K +HG L + + L AL+DMY KCG
Sbjct: 568 MLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGF 627
Query: 168 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
++ +F + + WN MI G HG + A+++F M+ PD +TF+ ++ A
Sbjct: 628 SKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISA 687
Query: 228 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 287
C+H G V EG+ F M+ + I+P +EHY MVDLLGRAG LEEA + IKAMP+E D
Sbjct: 688 CNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSS 747
Query: 288 IWRALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMK 344
IW LLSA R H EL + + R+E +V L N+Y + A ++ +MK
Sbjct: 748 IWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMK 807
Query: 345 IGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGL 386
G+ K+ G SWIE+ D + F + S I VL L
Sbjct: 808 EKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRL 849
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 135/301 (44%), Gaps = 50/301 (16%)
Query: 67 CDI-ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE--VEPDGFTFASV 123
CD A VF M +D+V W +LI G KN +F + L++F M + ++PD SV
Sbjct: 423 CDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSV 482
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
CA L AL VHG M++ + LN + ++L+D+Y+KCG +++ +VF +++ +++
Sbjct: 483 TNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENM 542
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS-------------- 229
WN+MI+ + + L +I +F+ M + + PDS++ +L A S
Sbjct: 543 VAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGY 602
Query: 230 ---------------------HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAG 268
CG F MQ++ LI L YG G G
Sbjct: 603 TLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYG-----YGSHG 657
Query: 269 NLEEACNMIKAMPV---EPDVVIWRALLSACRIHGKKELAEFAIANISRLESGDFVLLSN 325
+ A ++ M PD V + +L+SAC G E + NI D+ + N
Sbjct: 658 DCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGK----NIFEFMKQDYGIEPN 713
Query: 326 M 326
M
Sbjct: 714 M 714
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 136/289 (47%), Gaps = 16/289 (5%)
Query: 20 TYPSLVAAL--ISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDK- 76
T+PSL+ A ++ + H + V D F ++ +K G D A +VFD
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 77 ------MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARL 130
+ RDV WN++I GY K RF +G+ FR ML V PD F+ + VV+ +
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 131 GAL--CNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG-RIDVSKQVFDTVARDHVSVWN 187
G K +HG ML + + L AL+DMY K G ID + + + +V +WN
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 188 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQN 246
MI G G+ ++ ++ + +V S +F G L ACS GR+ H ++++
Sbjct: 242 VMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKM 301
Query: 247 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
P + +++ + + G + EA + + V+ + IW A+++A
Sbjct: 302 GLHNDPYV--CTSLLSMYSKCGMVGEAETVFSCV-VDKRLEIWNAMVAA 347
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 141/311 (45%), Gaps = 38/311 (12%)
Query: 2 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESL 61
+S + H ++ G P + +L+S Y++C A VFS V+D K L I
Sbjct: 287 NSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVD---KRLEI--- 340
Query: 62 MKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 121
WN ++ Y +N L LF M V PD FT +
Sbjct: 341 -----------------------WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLS 377
Query: 122 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 181
+V++ C+ LG K VH + ++ ++ + +AL+ +Y+KCG + VF ++
Sbjct: 378 NVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK 437
Query: 182 HVSVWNAMINGLAVHGLALDAIAVFSRM--EVENVLPDSITFVGILKACSHCGLVNEGRE 239
+ W ++I+GL +G +A+ VF M + +++ PDS + AC+ + G +
Sbjct: 438 DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQ 497
Query: 240 -HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRI 298
H ++++ ++ + +++DL + G E A + +M E ++V W +++S
Sbjct: 498 VHGSMIKTGLVLNVFVG--SSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMISC--- 551
Query: 299 HGKKELAEFAI 309
+ + L E +I
Sbjct: 552 YSRNNLPELSI 562
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 15/220 (6%)
Query: 86 NTLIGGYVKNVRFLDGLRLF-RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 144
N+ I ++ +L L L+ + S+ FTF S++ C+ L L K +HG ++
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 145 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFD--------TVARDHVSVWNAMINGLAVH 196
+ + ++ +LV+MY KCG +D + QVFD ARD V+VWN+MI+G
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARD-VTVWNSMIDGYFKF 146
Query: 197 GLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV--NEGRE-HFNIMQNRFLIQPQ 253
+ + F RM V V PD+ + ++ G EG++ H +++N
Sbjct: 147 RRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSF 206
Query: 254 LEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
L+ ++D+ + G +A + + + +VV+W ++
Sbjct: 207 LKT--ALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMI 244
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 199/363 (54%), Gaps = 5/363 (1%)
Query: 27 ALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVT 84
+LI+ + Q A+ +F ++ D S +I+ GE ++F MP +D +T
Sbjct: 346 SLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT 405
Query: 85 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 144
W +I +V N + + L F ML EV P+ +TF+SV++ A L L +HG ++
Sbjct: 406 WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVV 465
Query: 145 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIA 204
+ + + + +LV MY KCG + + ++F ++ ++ +N MI+G + +G A+
Sbjct: 466 KMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALK 525
Query: 205 VFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLL 264
+FS +E P+ +TF+ +L AC H G V+ G ++F M++ + I+P +HY MVDLL
Sbjct: 526 LFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLL 585
Query: 265 GRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE---SGDFV 321
GR+G L++A N+I MP +P +W +LLSA + H + +LAE A + LE + +V
Sbjct: 586 GRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYV 645
Query: 322 LLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHR 381
+LS +Y + + +R+ N+ K ++K G SWI L +H F A D+S ++ I
Sbjct: 646 VLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGF 705
Query: 382 VLE 384
L+
Sbjct: 706 TLK 708
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 147/328 (44%), Gaps = 31/328 (9%)
Query: 28 LISTYARCHQPHIAHHVFS--RVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTW 85
L+S Y R + + A VF V + S + ++ K G AR +FD+M R+V+TW
Sbjct: 183 LLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITW 242
Query: 86 NTLIGGYVKNVRFLDGLRLF-RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 144
+I GY K F DG LF R +V+ + T A + C +HGL+
Sbjct: 243 TAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVS 302
Query: 145 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIA 204
++ + L +L+ MY+K G + +K VF + WN++I GL +A
Sbjct: 303 RMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYE 362
Query: 205 VFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLL 264
+F +M + D +++ ++K S G +++ E F +M + I + M+
Sbjct: 363 LFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT-----WTAMISAF 413
Query: 265 GRAGNLEEA-CNMIKAMPVE--PDVVIWRALLSAC----------RIHGKKELAEFAIAN 311
G EEA C K + E P+ + ++LSA +IHG+ + + I N
Sbjct: 414 VSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGR--VVKMNIVN 471
Query: 312 ISRLESGDFVLLSNMYCSLKNWHNAERV 339
+++ L +MYC N ++A ++
Sbjct: 472 DLSVQNS----LVSMYCKCGNTNDAYKI 495
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 145/331 (43%), Gaps = 42/331 (12%)
Query: 29 ISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWN 86
IS +AR A +F ++ + S +I + + G+ A +VFD+MPVR ++N
Sbjct: 57 ISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYN 116
Query: 87 TLIGGYVKNVRFL-DGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHG---L 142
+I +KN L LF + E + ++A+++TG R G A++++ +
Sbjct: 117 AMITAMIKNKCDLGKAYELFCDI----PEKNAVSYATMITGFVRAGRFDEAEFLYAETPV 172
Query: 143 MLEKRVKLNYILS--------------------------AALVDMYAKCGRIDVSKQVFD 176
V N +LS +++V Y K GRI ++ +FD
Sbjct: 173 KFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFD 232
Query: 177 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKACSHCGLVN 235
+ +V W AMI+G G D +F RM E +V +S T + KAC
Sbjct: 233 RMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYR 292
Query: 236 EGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
EG + ++ +R ++ L +++ + + G + EA + M D V W +L++
Sbjct: 293 EGSQIHGLV-SRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK-NKDSVSWNSLITG 350
Query: 296 CRIHGKKELAEFAIANISRLESGDFVLLSNM 326
+ +K+++E A ++ D V ++M
Sbjct: 351 --LVQRKQISE-AYELFEKMPGKDMVSWTDM 378
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 118/349 (33%), Positives = 184/349 (52%), Gaps = 7/349 (2%)
Query: 53 SKNLVIESLM----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
S ++ SLM K G D AR +FDK+ +DVV+W ++I Y K+ R+ +G LF +
Sbjct: 251 SDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSEL 310
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
+ + P+ +TFA V+ CA L K VHG M S++LVDMY KCG I
Sbjct: 311 VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNI 370
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
+ +K V D + + W ++I G A +G +A+ F + PD +TFV +L AC
Sbjct: 371 ESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSAC 430
Query: 229 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 288
+H GLV +G E F + + + +HY +VDLL R+G E+ ++I MP++P +
Sbjct: 431 THAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFL 490
Query: 289 WRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKI 345
W ++L C +G +LAE A + ++E + +V ++N+Y + W ++R M+
Sbjct: 491 WASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQE 550
Query: 346 GGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
GV K+ G SW E+ H F AAD SH I L L ++ K +G
Sbjct: 551 IGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEG 599
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 144/301 (47%), Gaps = 5/301 (1%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAG 65
K H + G+ + L+ YA+C A VF + D S N+++ + G
Sbjct: 106 KVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVG 165
Query: 66 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS-AEVEPDGFTFASVV 124
+ ARK+FD+M +D +W ++ GYVK + + L L+ M P+ FT + V
Sbjct: 166 LLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAV 225
Query: 125 TGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS 184
A + + K +HG ++ + + +L ++L+DMY KCG ID ++ +FD + V
Sbjct: 226 AAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVV 285
Query: 185 VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIM 244
W +MI+ + ++FS + P+ TF G+L AC+ G++ M
Sbjct: 286 SWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYM 345
Query: 245 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKEL 304
R P ++VD+ + GN+E A +++ P +PD+V W +L+ C +G+ +
Sbjct: 346 -TRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDE 403
Query: 305 A 305
A
Sbjct: 404 A 404
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 85/168 (50%), Gaps = 5/168 (2%)
Query: 51 TFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 110
+F+ + +++ K G + A+ V D P D+V+W +LIGG +N + + L+ F +L
Sbjct: 354 SFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLK 413
Query: 111 AEVEPDGFTFASVVTGCARLGALCNA-KWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
+ +PD TF +V++ C G + ++ + + + R+ LVD+ A+ GR +
Sbjct: 414 SGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFE 473
Query: 170 VSKQVFDTVA-RDHVSVWNAMINGLAVHG---LALDAIAVFSRMEVEN 213
K V + + +W +++ G + +G LA +A ++E EN
Sbjct: 474 QLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPEN 521
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 185/331 (55%), Gaps = 3/331 (0%)
Query: 57 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 116
+++ +K G ARK FD++ + +++W++LI GY + F++ + LF+ + + D
Sbjct: 253 LVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQID 312
Query: 117 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 176
F +S++ A L K + L ++ L + ++VDMY KCG +D +++ F
Sbjct: 313 SFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFA 372
Query: 177 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 236
+ V W +I G HGL ++ +F M N+ PD + ++ +L ACSH G++ E
Sbjct: 373 EMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKE 432
Query: 237 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 296
G E F+ + I+P++EHY +VDLLGRAG L+EA ++I MP++P+V IW+ LLS C
Sbjct: 433 GEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLC 492
Query: 297 RIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRG 353
R+HG EL + + R+++ ++V++SN+Y W+ R + I G++K+ G
Sbjct: 493 RVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAG 552
Query: 354 KSWIELGDSIHQFNAADQSHAEMKAIHRVLE 384
SW+E+ +H F + + SH I L+
Sbjct: 553 MSWVEIEREVHFFRSGEDSHPLTPVIQETLK 583
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 131/251 (52%), Gaps = 10/251 (3%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
++ + N +I+ K E +A KVFD MP R+VV+W+ L+ G+V N L LF M
Sbjct: 39 LNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM 98
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
+ P+ FTF++ + C L AL +HG L+ ++ + +LVDMY+KCGRI
Sbjct: 99 GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 158
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENV--LPDSITFVGILK 226
+ +++VF + + WNAMI G G A+ F M+ N+ PD T +LK
Sbjct: 159 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 218
Query: 227 ACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNL---EEACNMIKAMPV 282
ACS G++ G++ H ++++ F G++VDL + G L +A + IK
Sbjct: 219 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK---- 274
Query: 283 EPDVVIWRALL 293
E ++ W +L+
Sbjct: 275 EKTMISWSSLI 285
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 124/253 (49%), Gaps = 12/253 (4%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N +++ K G + A KVF ++ R +++WN +I G+V L F M A ++
Sbjct: 146 NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK 205
Query: 115 --PDGFTFASVVTGCARLGALCNAKWVHGLMLEK--RVKLNYILSAALVDMYAKCGRIDV 170
PD FT S++ C+ G + K +HG ++ + ++ +LVD+Y KCG +
Sbjct: 206 ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFS 265
Query: 171 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 230
+++ FD + + W+++I G A G ++A+ +F R++ N DS I+ +
Sbjct: 266 ARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFAD 325
Query: 231 CGLVNEGREHFNIMQNRFLIQP---QLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 287
L+ +G++ MQ + P + ++VD+ + G ++EA M ++ DV+
Sbjct: 326 FALLRQGKQ----MQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLK-DVI 380
Query: 288 IWRALLSACRIHG 300
W +++ HG
Sbjct: 381 SWTVVITGYGKHG 393
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 89/170 (52%), Gaps = 5/170 (2%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
++T N V++ +K G D A K F +M ++DV++W +I GY K+ +R+F M
Sbjct: 346 LETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEM 405
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKR-VKLNYILSAALVDMYAKCGR 167
L +EPD + +V++ C+ G + + + +LE +K A +VD+ + GR
Sbjct: 406 LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGR 465
Query: 168 IDVSKQVFDTVA-RDHVSVWNAMINGLAVHG---LALDAIAVFSRMEVEN 213
+ +K + DT+ + +V +W +++ VHG L + + R++ +N
Sbjct: 466 LKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKN 515
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 119 TFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV 178
S++ C R G VH +L+ LN I S L+DMY KC ++ +VFD++
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 179 ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR 238
+V W+A+++G ++G ++++FS M + + P+ TF LKA CGL+N
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKA---CGLLNALE 124
Query: 239 EHFNI--MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 296
+ I + + +E ++VD+ + G + EA + + + V+ ++ W A+++
Sbjct: 125 KGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMIAGF 183
Query: 297 RIH---GKKELAEFAI---ANISRLESGDFVLLS 324
+H G K L F + ANI +F L S
Sbjct: 184 -VHAGYGSKALDTFGMMQEANIKE-RPDEFTLTS 215
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/373 (34%), Positives = 206/373 (55%), Gaps = 15/373 (4%)
Query: 37 QPHIAHHVFSRV-MDTFSKNLVIESLM-----KAGECDIARKVFDKM--PVRDVVTWNTL 88
+ I ++ +R+ + +N+V+ S + K + + AR+VFD M R+VV+W ++
Sbjct: 146 ESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSM 205
Query: 89 IGGYVKNVRFLDGLRLFRGMLSAEVE--PDGFTFASVVTGCARLGALCNAKWVHGLMLEK 146
I Y +N R + + LFR +A + F ASV++ C+ LG L K HGL+
Sbjct: 206 ITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRG 265
Query: 147 RVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVF 206
+ N +++ +L+DMYAKCG + ++++F + V + +MI A HGL A+ +F
Sbjct: 266 GYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLF 325
Query: 207 SRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGR 266
M + P+ +T +G+L ACSH GLVNEG E+ ++M ++ + P HY +VD+LGR
Sbjct: 326 DEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGR 385
Query: 267 AGNLEEACNMIKAMPV--EPDVVIWRALLSACRIHGKKELAEFAIANI---SRLESGDFV 321
G ++EA + K + V E ++W ALLSA R+HG+ E+ A + ++ + ++
Sbjct: 386 FGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYI 445
Query: 322 LLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHR 381
LSN Y W ++E +R MK G K+R SWIE DS++ F+A D S E I R
Sbjct: 446 ALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIER 505
Query: 382 VLEGLIQRAKFDG 394
L+ L +R K G
Sbjct: 506 FLKDLEKRMKERG 518
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 105/195 (53%), Gaps = 7/195 (3%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM- 108
DTF+ N ++ S +K E + ARK+FD+M +VV+W ++I GY + + L +F+ M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
V P+ +TFASV C+ L K +H + ++ N ++S++LVDMY KC +
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 169 DVSKQVFDTV---ARDHVSVWNAMINGLAVHGLALDAIAVFSRME--VENVLPDSITFVG 223
+ +++VFD++ R+ VS W +MI A + +AI +F + + +
Sbjct: 183 ETARRVFDSMIGYGRNVVS-WTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLAS 241
Query: 224 ILKACSHCGLVNEGR 238
++ ACS G + G+
Sbjct: 242 VISACSSLGRLQWGK 256
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/413 (32%), Positives = 220/413 (53%), Gaps = 24/413 (5%)
Query: 2 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLV---- 57
D + H + G A+ + +A+++ Y + A F DT N+V
Sbjct: 108 DVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFD---DTRDPNVVSITN 164
Query: 58 -IESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML-SAEVEP 115
I +K E + A +F MP R VVTWN +IGG+ + R + + F ML V P
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 224
Query: 116 DGFTFASVVTGCARLGALCNAKWVHGL---MLEKRVKLNYILSAALVDMYAKCGRIDVSK 172
+ TF +T + + + K +H L KR N + +L+ Y+KCG ++ S
Sbjct: 225 NESTFPCAITAISNIASHGAGKSIHACAIKFLGKR--FNVFVWNSLISFYSKCGNMEDSL 282
Query: 173 QVFDTVARDHVSV--WNAMINGLAVHGLALDAIAVFSRM-EVENVLPDSITFVGILKACS 229
F+ + + ++ WN+MI G A +G +A+A+F +M + N+ P+++T +G+L AC+
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 342
Query: 230 HCGLVNEGREHFNIMQNRFLIQP---QLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 286
H GL+ EG +FN N + P +LEHY MVD+L R+G +EA +IK+MP++P +
Sbjct: 343 HAGLIQEGYMYFNKAVNDY-DDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGI 401
Query: 287 VIWRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMM 343
W+ALL C+IH K LA+ A + I L+ D +V+LSN Y +++NW N +R M
Sbjct: 402 GFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKM 461
Query: 344 KIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDGCF 396
K G+++ G SWIE+ D I F AD+++ ++R+L + Q + + C+
Sbjct: 462 KETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLEENECW 514
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 130/305 (42%), Gaps = 47/305 (15%)
Query: 42 HHVFSRVMDTFSKNLVIESLMKAGECDIAR---KVFDKMPVRDVVTWNTLIGGYVKNVRF 98
+H + + T S N + E L+K + D+ R KVFD++P DV++ +IG +VK R
Sbjct: 16 YHSSANALVTKSPNSIPE-LVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRH 74
Query: 99 LDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAAL 158
++ + F+ +L + P+ FTF +V+ + K +H L+ + N + +A+
Sbjct: 75 VEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAV 134
Query: 159 VDMYAKCGRIDVSKQVFDTVARD--------------------------------HVSVW 186
++ Y K + +++ FD RD V W
Sbjct: 135 LNCYVKLSTLTDARRCFDDT-RDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTW 193
Query: 187 NAMINGLAVHGLALDAIAVFSRMEVEN-VLPDSITFVGILKACSHCGLVNEGRE----HF 241
NA+I G + G +A+ F M E V+P+ TF + A S+ G+
Sbjct: 194 NAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAI 253
Query: 242 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEP-DVVIWRALLSACRIHG 300
+ RF + + +++ + GN+E++ + E ++V W +++ +G
Sbjct: 254 KFLGKRF----NVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNG 309
Query: 301 KKELA 305
+ E A
Sbjct: 310 RGEEA 314
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 176/320 (55%), Gaps = 13/320 (4%)
Query: 48 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 107
+ DT N ++ K + A+ VF+ +D+V WN++I G+ +N + L LF
Sbjct: 374 IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHR 433
Query: 108 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSA------ALVDM 161
M S V P+G T AS+ + CA LG+L +H VKL ++ S+ AL+D
Sbjct: 434 MNSESVTPNGVTVASLFSACASLGSLAVGSSLHAY----SVKLGFLASSSVHVGTALLDF 489
Query: 162 YAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
YAKCG ++ +FDT+ + W+AMI G G + ++ +F M + P+ TF
Sbjct: 490 YAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTF 549
Query: 222 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP 281
IL AC H G+VNEG+++F+ M + P +HY MVD+L RAG LE+A ++I+ MP
Sbjct: 550 TSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMP 609
Query: 282 VEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAER 338
++PDV + A L C +H + +L E I + L D +VL+SN+Y S W+ A+
Sbjct: 610 IQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKE 669
Query: 339 VRNMMKIGGVRKKRGKSWIE 358
VRN+MK G+ K G S +E
Sbjct: 670 VRNLMKQRGLSKIAGHSTME 689
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 138/262 (52%), Gaps = 17/262 (6%)
Query: 55 NLVIESLM----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 110
N+V+ L+ K GE A KVF+ + +R+VV W ++I GYVKN +GL LF M
Sbjct: 176 NVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRE 235
Query: 111 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 170
V + +T+ +++ C +L AL KW HG +++ ++L+ L +L+DMY KCG I
Sbjct: 236 NNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISN 295
Query: 171 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 230
+++VF+ + + +W AMI G +G +A+++F +M+ + P+ +T +L S
Sbjct: 296 ARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVL---SG 352
Query: 231 CGLVNEGREHFNIMQNRFLIQPQLEHYGT-----MVDLLGRAGNLEEACNMIKAMPVEPD 285
CGL+ E+ + ++ + ++ + T +V + + +A + M E D
Sbjct: 353 CGLI----ENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDA-KYVFEMESEKD 407
Query: 286 VVIWRALLSACRIHGKKELAEF 307
+V W +++S +G A F
Sbjct: 408 IVAWNSIISGFSQNGSIHEALF 429
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 112/225 (49%), Gaps = 5/225 (2%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
AR VFD++P D W ++ Y N ++ ++L+ ++ D F+ + C
Sbjct: 95 ARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTE 154
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 189
L L N K +H L K + ++ L+DMYAKCG I + +VF+ + +V W +M
Sbjct: 155 LQDLDNGKKIH-CQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSM 213
Query: 190 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR-EHFNIMQNRF 248
I G + L + + +F+RM NVL + T+ ++ AC+ +++G+ H ++++
Sbjct: 214 IAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGI 273
Query: 249 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
+ L +++D+ + G++ A + D+V+W A++
Sbjct: 274 ELSSCL--VTSLLDMYVKCGDISNARRVFNEHS-HVDLVMWTAMI 315
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 189/337 (56%), Gaps = 4/337 (1%)
Query: 62 MKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 121
M+ G+ V MPVR++V WNTLI G +N L L++ M + P+ TF
Sbjct: 137 MRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFV 196
Query: 122 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 181
+V++ C+ L + +H ++ + ++L+ MY+KCG + + + F +
Sbjct: 197 TVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDE 256
Query: 182 HVSVWNAMINGLAVHGLALDAIAVFSRM-EVENVLPDSITFVGILKACSHCGLVNEGREH 240
+W++MI+ HG +AI +F+ M E N+ + + F+ +L ACSH GL ++G E
Sbjct: 257 DEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLEL 316
Query: 241 FNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
F++M ++ +P L+HY +VDLLGRAG L++A +I++MP++ D+VIW+ LLSAC IH
Sbjct: 317 FDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHK 376
Query: 301 KKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWI 357
E+A+ I +++ D +VLL+N++ S K W + VR M+ V+K+ G SW
Sbjct: 377 NAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWF 436
Query: 358 ELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
E +HQF D+S ++ K I+ L+ L K G
Sbjct: 437 EHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKG 473
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 147/287 (51%), Gaps = 6/287 (2%)
Query: 47 RVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR 106
R + S N++I ++AG+ ARKVFD+MP R + TWN +I G ++ +GL LFR
Sbjct: 21 RKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFR 80
Query: 107 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 166
M PD +T SV +G A L ++ + +HG ++ ++L+ +++++L MY + G
Sbjct: 81 EMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNG 140
Query: 167 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 226
++ + V ++ ++ WN +I G A +G + ++ M++ P+ ITFV +L
Sbjct: 141 KLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLS 200
Query: 227 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 286
+CS + +G++ + + + +++ + + G L +A E D
Sbjct: 201 SCSDLAIRGQGQQ-IHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDE-DE 258
Query: 287 VIWRALLSACRIHGK-KELAEF--AIANISRLESGDFVLLSNMY-CS 329
V+W +++SA HG+ E E +A + +E + L+ +Y CS
Sbjct: 259 VMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACS 305
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 195/359 (54%), Gaps = 5/359 (1%)
Query: 5 TAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLM 62
T + H G + + L+ Y++C P A +FS V DT N +I+
Sbjct: 336 TGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYF 395
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
G D A++VF+++ + +++WN++ G+ +N ++ L F M ++ D + +S
Sbjct: 396 SCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSS 455
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 182
V++ CA + +L + V + + ++S++L+D+Y KCG ++ ++VFDT+ +
Sbjct: 456 VISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSD 515
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
WN+MI+G A +G +AI +F +M V + P ITF+ +L AC++CGLV EGR+ F
Sbjct: 516 EVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFE 575
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 302
M+ P EH+ MVDLL RAG +EEA N+++ MP + D +W ++L C +G K
Sbjct: 576 SMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYK 635
Query: 303 ELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIE 358
+ + A I LE + +V LS ++ + +W ++ VR +M+ V K G SW +
Sbjct: 636 AMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 140/291 (48%), Gaps = 39/291 (13%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D +S N+V+ KAGE +AR++F+ MP +DVVT N+L+ GY+ N + LRLF+ +
Sbjct: 123 DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL- 181
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK----- 164
D T +V+ CA L AL K +H +L V+ + ++++LV++YAK
Sbjct: 182 --NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLR 239
Query: 165 --------------------------CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGL 198
CGR++ S+ +FD + V +WN+MI+G + +
Sbjct: 240 MASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNM 299
Query: 199 ALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG 258
++A+ +F+ M E DS T ++ AC G + G++ + +F + +
Sbjct: 300 KMEALVLFNEMRNE-TREDSRTLAAVINACIGLGFLETGKQ-MHCHACKFGLIDDIVVAS 357
Query: 259 TMVDLLGRAGNLEEACNMIKAMPVEPDVVI---WRALLSACRIHGKKELAE 306
T++D+ + G+ EAC + + +++ + S RI K + E
Sbjct: 358 TLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFE 408
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 152/327 (46%), Gaps = 36/327 (11%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAG 65
+ HA++++ G + ++L++ YA+C +A ++ ++ D S + +I G
Sbjct: 208 QIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCG 267
Query: 66 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 125
+ +R +FD+ R V+ WN++I GY+ N ++ L LF M + E D T A+V+
Sbjct: 268 RVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN-ETREDSRTLAAVIN 326
Query: 126 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK--------------------- 164
C LG L K +H + + + ++++ L+DMY+K
Sbjct: 327 ACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTIL 386
Query: 165 ----------CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENV 214
CGRID +K+VF+ + + WN+M NG + +G ++ + F +M ++
Sbjct: 387 LNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDL 446
Query: 215 LPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEAC 274
D ++ ++ AC+ + G + F L Q+ +++DL + G +E
Sbjct: 447 PTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVS-SSLIDLYCKCGFVEHGR 505
Query: 275 NMIKAMPVEPDVVIWRALLSACRIHGK 301
+ M V+ D V W +++S +G+
Sbjct: 506 RVFDTM-VKSDEVPWNSMISGYATNGQ 531
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 186/340 (54%), Gaps = 3/340 (0%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D F + +IE G + + F +D+ +W ++I +V+N + LFR +
Sbjct: 392 DEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLF 451
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
S+ + P+ +T + +++ CA AL + + + G ++ + + + + MYAK G +
Sbjct: 452 SSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMP 511
Query: 170 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
++ QVF V V+ ++AMI+ LA HG A +A+ +F M+ + P+ F+G+L AC
Sbjct: 512 LANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACC 571
Query: 230 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 289
H GLV +G ++F M+N + I P +H+ +VDLLGR G L +A N+I + + V W
Sbjct: 572 HGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTW 631
Query: 290 RALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIG 346
RALLS+CR++ + + + LE SG +VLL N+Y +AE VR +M+
Sbjct: 632 RALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDR 691
Query: 347 GVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGL 386
GV+K+ SWI +G+ H F AD SH + I+ +LE +
Sbjct: 692 GVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 124/238 (52%), Gaps = 9/238 (3%)
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
K E AR++FD+MP R+++++N+LI GY + + + LF A ++ D FT+A
Sbjct: 94 KCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAG 153
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-ARD 181
+ C L + +HGL++ + L L+DMY+KCG++D + +FD RD
Sbjct: 154 ALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERD 213
Query: 182 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 241
VS WN++I+G G A + + + ++M + + + +LKAC C +NEG
Sbjct: 214 QVS-WNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKAC--CINLNEGFIEK 270
Query: 242 NIMQNRFLIQPQLEH----YGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
+ + + + +E ++D+ + G+L+EA + MP +VV + A++S
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMISG 327
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 124/260 (47%), Gaps = 15/260 (5%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLD-----GLRL 104
D + +++ K G A K+F MP ++VVT+N +I G+++ D +L
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 105 FRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK 164
F M +EP TF+ V+ C+ L + +H L+ + + + + +AL+++YA
Sbjct: 346 FMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYAL 405
Query: 165 CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGI 224
G + Q F + ++ ++ W +MI+ + A +F ++ ++ P+ T +
Sbjct: 406 MGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLM 465
Query: 225 LKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTM----VDLLGRAGNLEEACNMIKAM 280
+ AC+ ++ G + +Q + I+ ++ + ++ + + ++GN+ A N +
Sbjct: 466 MSACADFAALSSGEQ----IQG-YAIKSGIDAFTSVKTSSISMYAKSGNMPLA-NQVFIE 519
Query: 281 PVEPDVVIWRALLSACRIHG 300
PDV + A++S+ HG
Sbjct: 520 VQNPDVATYSAMISSLAQHG 539
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 123/267 (46%), Gaps = 17/267 (6%)
Query: 52 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 111
F N++I+ K G+ D A +FD+ RD V+WN+LI GYV+ + L L M
Sbjct: 184 FLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRD 243
Query: 112 EVEPDGFTFASVVTGCA---RLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
+ + SV+ C G + +H + ++ + ++ AL+DMYAK G +
Sbjct: 244 GLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSL 303
Query: 169 DVSKQVFDTVARDHVSVWNAMINGL-----AVHGLALDAIAVFSRMEVENVLPDSITFVG 223
+ ++F + +V +NAMI+G + +A +F M+ + P TF
Sbjct: 304 KEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSV 363
Query: 224 ILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHY--GTMVDLLGRAGNLEEACNMIKAM 280
+LKACS + GR+ H I +N F Q + + +++L G+ E+ A
Sbjct: 364 VLKACSAAKTLEYGRQIHALICKNNF----QSDEFIGSALIELYALMGSTEDGMQCF-AS 418
Query: 281 PVEPDVVIWRALLSACRIHGKKELAEF 307
+ D+ W +++ C + ++ + F
Sbjct: 419 TSKQDIASWTSMID-CHVQNEQLESAF 444
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 4/169 (2%)
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 187
A+ G++ K HG M++ + L L++MY KC + ++Q+FD + ++ +N
Sbjct: 58 AKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFN 117
Query: 188 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH-CGLVNEGREHFNIMQN 246
++I+G G A+ +F N+ D T+ G L C C L H ++ N
Sbjct: 118 SLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVN 177
Query: 247 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
+ Q+ ++D+ + G L++A ++ E D V W +L+S
Sbjct: 178 G--LSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLISG 223
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 211 bits (538), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 193/349 (55%), Gaps = 5/349 (1%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D KN +I K G+ ++ +F+ + R+++TWN ++ + + L+L M
Sbjct: 498 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 557
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI- 168
S V D F+F+ ++ A+L L + +HGL ++ + + + A DMY+KCG I
Sbjct: 558 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 617
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
+V K + +V R S WN +I+ L HG + A F M + P +TFV +L AC
Sbjct: 618 EVVKMLPPSVNRSLPS-WNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 676
Query: 229 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 288
SH GLV++G +++++ F ++P +EH ++DLLGR+G L EA I MP++P+ ++
Sbjct: 677 SHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 736
Query: 289 WRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKI 345
WR+LL++C+IHG + A N+S+LE D +VL SNM+ + W + E VR M
Sbjct: 737 WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGF 796
Query: 346 GGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
++KK+ SW++L D + F D++H + I+ LE + + K G
Sbjct: 797 KNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESG 845
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 124/251 (49%), Gaps = 5/251 (1%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N ++ AG A VF +MP +D+++WN+L+ +V + R LD L L M+S+
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
+ TF S + C + +HGL++ + N I+ ALV MY K G + S++V
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 419
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG-L 233
+ R V WNA+I G A A+A F M VE V + IT V +L AC G L
Sbjct: 420 LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL 479
Query: 234 VNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 292
+ G+ H I+ F +++ +++ + + G+L + ++ + +++ W A+
Sbjct: 480 LERGKPLHAYIVSAGFESDEHVKN--SLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAM 536
Query: 293 LSACRIHGKKE 303
L+A HG E
Sbjct: 537 LAANAHHGHGE 547
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 131/258 (50%), Gaps = 14/258 (5%)
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
K G AR +FD MPVR+ V+WNT++ G V+ +L+G+ FR M ++P F AS
Sbjct: 4 KFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIAS 63
Query: 123 VVTGCARLGALC-NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 181
+VT C R G++ VHG + + + + +S A++ +Y G + S++VF+ +
Sbjct: 64 LVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR 123
Query: 182 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENV--LPDSITFVGILKACSHCGLVNE--- 236
+V W +++ G + G + I ++ M E V +S++ V S CGL+ +
Sbjct: 124 NVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLV-----ISSCGLLKDESL 178
Query: 237 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 296
GR+ + L + +L +++ +LG GN++ A + M E D + W ++ +A
Sbjct: 179 GRQIIGQVVKSGL-ESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAY 236
Query: 297 RIHGKKELAEFAIANISR 314
+G E F I ++ R
Sbjct: 237 AQNGHIE-ESFRIFSLMR 253
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 35/280 (12%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N ++ K GE +R+V +MP RDVV WN LIGGY ++ L F+ M V
Sbjct: 401 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 460
Query: 115 PDGFTFASVVTGCARLGALCN-AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 173
+ T SV++ C G L K +H ++ + + + +L+ MYAKCG + S+
Sbjct: 461 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 520
Query: 174 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 233
+F+ + ++ WNAM+ A HG + + + S+M V D +F L A + +
Sbjct: 521 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 580
Query: 234 VNEGR-----------EH----FNIMQNRF-----------LIQP----QLEHYGTMVDL 263
+ EG+ EH FN + + ++ P L + ++
Sbjct: 581 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 640
Query: 264 LGRAGNLEEAC---NMIKAMPVEPDVVIWRALLSACRIHG 300
LGR G EE C + + M ++P V + +LL+AC HG
Sbjct: 641 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS-HG 679
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 8/245 (3%)
Query: 54 KNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV 113
+N +I L G D A +FD+M RD ++WN++ Y +N + R+F M
Sbjct: 198 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 257
Query: 114 EPDGFTFASVVTGCARLGALCNAKW---VHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 170
E + T +++++ LG + + KW +HGL+++ + L+ MYA GR
Sbjct: 258 EVNSTTVSTLLS---VLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 314
Query: 171 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 230
+ VF + + WN+++ G +LDA+ + M + +TF L AC
Sbjct: 315 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 374
Query: 231 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 290
+GR ++ L Q+ +V + G+ G + E+ ++ MP DVV W
Sbjct: 375 PDFFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMP-RRDVVAWN 432
Query: 291 ALLSA 295
AL+
Sbjct: 433 ALIGG 437
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 113/233 (48%), Gaps = 6/233 (2%)
Query: 65 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVV 124
G +RKVF++MP R+VV+W +L+ GY + + +++GM V + + + V+
Sbjct: 108 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVI 167
Query: 125 TGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHV 183
+ C L + + G +++ ++ + +L+ M G +D + +FD ++ RD +
Sbjct: 168 SSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 227
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFN 242
S WN++ A +G ++ +FS M + +S T +L H GR H
Sbjct: 228 S-WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGL 286
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
+++ F + T++ + AG EA + K MP + D++ W +L+++
Sbjct: 287 VVKMGF--DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 336
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 211 bits (538), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 193/349 (55%), Gaps = 5/349 (1%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D KN +I K G+ ++ +F+ + R+++TWN ++ + + L+L M
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 540
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI- 168
S V D F+F+ ++ A+L L + +HGL ++ + + + A DMY+KCG I
Sbjct: 541 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 600
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
+V K + +V R S WN +I+ L HG + A F M + P +TFV +L AC
Sbjct: 601 EVVKMLPPSVNRSLPS-WNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 659
Query: 229 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 288
SH GLV++G +++++ F ++P +EH ++DLLGR+G L EA I MP++P+ ++
Sbjct: 660 SHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 719
Query: 289 WRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKI 345
WR+LL++C+IHG + A N+S+LE D +VL SNM+ + W + E VR M
Sbjct: 720 WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGF 779
Query: 346 GGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
++KK+ SW++L D + F D++H + I+ LE + + K G
Sbjct: 780 KNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESG 828
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 124/251 (49%), Gaps = 5/251 (1%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N ++ AG A VF +MP +D+++WN+L+ +V + R LD L L M+S+
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 342
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
+ TF S + C + +HGL++ + N I+ ALV MY K G + S++V
Sbjct: 343 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 402
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG-L 233
+ R V WNA+I G A A+A F M VE V + IT V +L AC G L
Sbjct: 403 LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL 462
Query: 234 VNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 292
+ G+ H I+ F +++ +++ + + G+L + ++ + +++ W A+
Sbjct: 463 LERGKPLHAYIVSAGFESDEHVKN--SLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAM 519
Query: 293 LSACRIHGKKE 303
L+A HG E
Sbjct: 520 LAANAHHGHGE 530
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 35/280 (12%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N ++ K GE +R+V +MP RDVV WN LIGGY ++ L F+ M V
Sbjct: 384 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 443
Query: 115 PDGFTFASVVTGCARLGALCN-AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 173
+ T SV++ C G L K +H ++ + + + +L+ MYAKCG + S+
Sbjct: 444 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 503
Query: 174 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 233
+F+ + ++ WNAM+ A HG + + + S+M V D +F L A + +
Sbjct: 504 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 563
Query: 234 VNEGR-----------EH----FNIMQNRF-----------LIQP----QLEHYGTMVDL 263
+ EG+ EH FN + + ++ P L + ++
Sbjct: 564 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 623
Query: 264 LGRAGNLEEAC---NMIKAMPVEPDVVIWRALLSACRIHG 300
LGR G EE C + + M ++P V + +LL+AC HG
Sbjct: 624 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS-HG 662
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 124/244 (50%), Gaps = 14/244 (5%)
Query: 77 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC-N 135
MPVR+ V+WNT++ G V+ +L+G+ FR M ++P F AS+VT C R G++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 136 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAV 195
VHG + + + + +S A++ +Y G + S++VF+ + +V W +++ G +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 196 HGLALDAIAVFSRMEVENV--LPDSITFVGILKACSHCGLVNE---GREHFNIMQNRFLI 250
G + I ++ M E V +S++ V S CGL+ + GR+ + L
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLV-----ISSCGLLKDESLGRQIIGQVVKSGL- 174
Query: 251 QPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIA 310
+ +L +++ +LG GN++ A + M E D + W ++ +A +G E F I
Sbjct: 175 ESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHIE-ESFRIF 232
Query: 311 NISR 314
++ R
Sbjct: 233 SLMR 236
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 8/245 (3%)
Query: 54 KNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV 113
+N +I L G D A +FD+M RD ++WN++ Y +N + R+F M
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 114 EPDGFTFASVVTGCARLGALCNAKW---VHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 170
E + T +++++ LG + + KW +HGL+++ + L+ MYA GR
Sbjct: 241 EVNSTTVSTLLS---VLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 297
Query: 171 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 230
+ VF + + WN+++ G +LDA+ + M + +TF L AC
Sbjct: 298 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 357
Query: 231 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 290
+GR ++ L Q+ +V + G+ G + E+ ++ MP DVV W
Sbjct: 358 PDFFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMP-RRDVVAWN 415
Query: 291 ALLSA 295
AL+
Sbjct: 416 ALIGG 420
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 113/233 (48%), Gaps = 6/233 (2%)
Query: 65 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVV 124
G +RKVF++MP R+VV+W +L+ GY + + +++GM V + + + V+
Sbjct: 91 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVI 150
Query: 125 TGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHV 183
+ C L + + G +++ ++ + +L+ M G +D + +FD ++ RD +
Sbjct: 151 SSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 210
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFN 242
S WN++ A +G ++ +FS M + +S T +L H GR H
Sbjct: 211 S-WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGL 269
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
+++ F + T++ + AG EA + K MP + D++ W +L+++
Sbjct: 270 VVKMGF--DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 319
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/330 (35%), Positives = 180/330 (54%), Gaps = 8/330 (2%)
Query: 65 GECDIARK---VFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 121
G+C R +F +M ++ V+W +L+ YV+N L+ VE F +
Sbjct: 255 GKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMIS 314
Query: 122 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 181
SV++ CA + L + +H ++ V+ + +ALVDMY KCG I+ S+Q FD +
Sbjct: 315 SVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 374
Query: 182 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENV--LPDSITFVGILKACSHCGLVNEGRE 239
++ N++I G A G A+A+F M P+ +TFV +L ACS G V G +
Sbjct: 375 NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMK 434
Query: 240 HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIH 299
F+ M++ + I+P EHY +VD+LGRAG +E A IK MP++P + +W AL +ACR+H
Sbjct: 435 IFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMH 494
Query: 300 GKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSW 356
GK +L A N+ +L +SG+ VLLSN + + W A VR +K G++K G SW
Sbjct: 495 GKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSW 554
Query: 357 IELGDSIHQFNAADQSHAEMKAIHRVLEGL 386
I + + +H F A D+SH K I L L
Sbjct: 555 ITVKNQVHAFQAKDRSHILNKEIQTTLAKL 584
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 128/292 (43%), Gaps = 10/292 (3%)
Query: 40 IAHHVFSRVMDT----FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKN 95
+ H + +D+ F N +I K + AR V P R+VV+W +LI G +N
Sbjct: 27 VVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQN 86
Query: 96 VRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS 155
F L F M V P+ FTF A L K +H L ++ L+ +
Sbjct: 87 GHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVG 146
Query: 156 AALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL 215
+ DMY K D ++++FD + ++ WNA I+ G +AI F +
Sbjct: 147 CSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGH 206
Query: 216 PDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEAC 274
P+SITF L ACS +N G + H ++++ F + ++D G+ + +
Sbjct: 207 PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGF--DTDVSVCNGLIDFYGKCKQIRSSE 264
Query: 275 NMIKAMPVEPDVVIWRALLSACRIHGKKELAE--FAIANISRLESGDFVLLS 324
+ M + + V W +L++A + + E A + + +E+ DF++ S
Sbjct: 265 IIFTEMGTK-NAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISS 315
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 111/259 (42%), Gaps = 2/259 (0%)
Query: 47 RVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR 106
R++D F + K D ARK+FD++P R++ TWN I V + R + + F
Sbjct: 139 RILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFI 198
Query: 107 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 166
+ P+ TF + + C+ L +HGL+L + + L+D Y KC
Sbjct: 199 EFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCK 258
Query: 167 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 226
+I S+ +F + + W +++ + A ++ R + V +L
Sbjct: 259 QIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLS 318
Query: 227 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 286
AC+ + GR + + ++ + +VD+ G+ G +E++ MP E ++
Sbjct: 319 ACAGMAGLELGRS-IHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNL 376
Query: 287 VIWRALLSACRIHGKKELA 305
V +L+ G+ ++A
Sbjct: 377 VTRNSLIGGYAHQGQVDMA 395
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 118/302 (39%), Positives = 174/302 (57%), Gaps = 9/302 (2%)
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
K G AR++FD +DVVTWN +I Y K + + L R M +++P+ TF
Sbjct: 274 KTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVG 333
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 182
+++ CA A + V L+ E+R+ L+ IL ALVDMYAK G ++ + ++F+ +
Sbjct: 334 LLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKD 393
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVEN--VLPDSITFVGILKACSHCGLVNEGREH 240
V W AMI+G HGLA +A+ +F++ME EN V P+ ITF+ +L ACSH GLV EG
Sbjct: 394 VKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRC 453
Query: 241 FNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
F M + P++EHYG +VDLLGRAG LEEA +I+ +P+ D WRALL+ACR++G
Sbjct: 454 FKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYG 513
Query: 301 KKELAE---FAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWI 357
+L E +A + D +LL+ + N + + N + G RK+ G S I
Sbjct: 514 NADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEKS--LDNELNKG--RKEAGYSAI 569
Query: 358 EL 359
E+
Sbjct: 570 EI 571
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 140/265 (52%), Gaps = 8/265 (3%)
Query: 54 KNLVIESLMKAGECDIARKVFDKMPVR-DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 112
+N +I G+ ARKVFD+MP D VT++TL+ GY++ + L LFR M +E
Sbjct: 163 RNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSE 222
Query: 113 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 172
V + T S ++ + LG L A+ H L ++ + L+ L AL+ MY K G I ++
Sbjct: 223 VVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSAR 282
Query: 173 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 232
++FD R V WN MI+ A GL + + + +M+ E + P+S TFVG+L +C++
Sbjct: 283 RIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSE 342
Query: 233 LVNEGREHFNIMQNRFLIQPQLEHYGT-MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 291
GR ++++ + + GT +VD+ + G LE+A + M + DV W A
Sbjct: 343 AAFVGRTVADLLEEERIALDAI--LGTALVDMYAKVGLLEKAVEIFNRMK-DKDVKSWTA 399
Query: 292 LLSACRIHGKKELAEFAIANISRLE 316
++S HG LA A+ +++E
Sbjct: 400 MISGYGAHG---LAREAVTLFNKME 421
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 106/226 (46%), Gaps = 5/226 (2%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
A +F+ + ++ +NT+I GY + +F + + + D F+F + + C+R
Sbjct: 78 ASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSR 137
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV-WNA 188
+ + +HG+ L + L AL+ Y CG+I +++VFD + + +V ++
Sbjct: 138 ELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFST 197
Query: 189 MING-LAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 247
++NG L V AL A+ +F M V+ + T + L A S G ++ G E +++ +
Sbjct: 198 LMNGYLQVSKKAL-ALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLS-GAESAHVLCIK 255
Query: 248 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
+ L ++ + G+ G + A + + DVV W ++
Sbjct: 256 IGLDLDLHLITALIGMYGKTGGISSARRIFDC-AIRKDVVTWNCMI 300
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 190/327 (58%), Gaps = 11/327 (3%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
+ TF + +I K G+ D AR+VF++M +D V W +I Y +N + + +LF M
Sbjct: 266 LSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM 325
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
V PD T ++V++ C +GAL K + E ++ N ++ LVDMY KCGR+
Sbjct: 326 EKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRV 385
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
+ + +VF+ + + + WNAMI A G A +A+ +F RM +V P ITF+G+L AC
Sbjct: 386 EEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSAC 442
Query: 229 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 288
H GLV++G +F+ M + F + P++EHY ++DLL RAG L+EA ++ P +PD ++
Sbjct: 443 VHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIM 502
Query: 289 WRALLSACRIHGKKELA--EFAIANISRLE----SGDFVLLSNMYCSLKNWHNAERVRNM 342
A+L AC H +K++A E A+ + ++ +G++V+ SN+ +K W + ++R +
Sbjct: 503 LAAILGAC--HKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRAL 560
Query: 343 MKIGGVRKKRGKSWIELGDSIHQFNAA 369
M+ GV K G SWIE+ + +F A
Sbjct: 561 MRDRGVVKTPGCSWIEIEGELMEFLAG 587
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 126/233 (54%), Gaps = 2/233 (0%)
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
K G+ ARK+FD++ RD V+WN++I GY + D + LFR M EPD T S
Sbjct: 179 KCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVS 238
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 182
++ C+ LG L + + + + K++ L+ L + L+ MY KCG +D +++VF+ + +
Sbjct: 239 MLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKD 298
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
W AMI + +G + +A +F ME V PD+ T +L AC G + G++
Sbjct: 299 RVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQ-IE 357
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
+ +Q + +VD+ G+ G +EEA + +AMPV+ + W A+++A
Sbjct: 358 THASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEAT-WNAMITA 409
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 132/255 (51%), Gaps = 9/255 (3%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDG-LRLFRGMLSAEV 113
N +I ++ G+ + + +F + ++N +I G + L L+R M + +
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGL 128
Query: 114 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 173
+PD FT+ V CA+L + + VH + + ++ + ++ +L+ MYAKCG++ +++
Sbjct: 129 KPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARK 188
Query: 174 VFDTVA-RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 232
+FD + RD VS WN+MI+G + G A DA+ +F +ME E PD T V +L ACSH G
Sbjct: 189 LFDEITERDTVS-WNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLG 247
Query: 233 LVNEGR--EHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 290
+ GR E I + I ++ + G+ G+L+ A + M ++ D V W
Sbjct: 248 DLRTGRLLEEMAITKK---IGLSTFLGSKLISMYGKCGDLDSARRVFNQM-IKKDRVAWT 303
Query: 291 ALLSACRIHGKKELA 305
A+++ +GK A
Sbjct: 304 AMITVYSQNGKSSEA 318
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 114/340 (33%), Positives = 186/340 (54%), Gaps = 9/340 (2%)
Query: 55 NLVIESLM-----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
N+V+E+ + K G ++A +VF +M + V+W +LI G+ +N M
Sbjct: 251 NVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQ 310
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
S +PD T V+ C+++G+L + VH +L++ V L+ + + AL+DMY+KCG +
Sbjct: 311 SLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALS 369
Query: 170 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
S+++F+ V R + WN MI+ +HG + +++F +M N+ PD TF +L A S
Sbjct: 370 SSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALS 429
Query: 230 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 289
H GLV +G+ F++M N++ IQP +HY ++DLL RAG +EEA +MI + ++ + IW
Sbjct: 430 HSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIW 489
Query: 290 RALLSACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIG 346
ALLS C H + + A I +L G L+SN + + W +VR +M+ G
Sbjct: 490 VALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNG 549
Query: 347 GVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGL 386
+ K G S IE+ + F D SH E + +VL L
Sbjct: 550 AMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNL 589
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 5/255 (1%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D F + V+ MK G+ D A +F KM RDV+ W T++ G+ + + L + +R M
Sbjct: 150 DVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQ 209
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
+ D ++ LG + VHG + + +N ++ +LVDMYAK G I+
Sbjct: 210 NEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIE 269
Query: 170 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
V+ +VF + W ++I+G A +GLA A M+ PD +T VG+L ACS
Sbjct: 270 VASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACS 329
Query: 230 HCGLVNEGR-EHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 288
G + GR H I++ L + ++D+ + G L + + + + D+V
Sbjct: 330 QVGSLKTGRLVHCYILKRHVLDRVTAT---ALMDMYSKCGALSSSREIFEHVG-RKDLVC 385
Query: 289 WRALLSACRIHGKKE 303
W ++S IHG +
Sbjct: 386 WNTMISCYGIHGNGQ 400
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 8/271 (2%)
Query: 51 TFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 110
+ S++L I S + GE ARKVFD++P R V +N++I Y + + LRL+ M++
Sbjct: 51 SISRDL-IASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIA 109
Query: 111 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 170
+++PD TF + C L + V ++ K + + ++++++Y KCG++D
Sbjct: 110 EKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDE 169
Query: 171 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 230
++ +F +A+ V W M+ G A G +L A+ + M+ E D + +G+L+A
Sbjct: 170 AEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGD 229
Query: 231 CGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 289
G GR H + + + +E ++VD+ + G +E A + M + V W
Sbjct: 230 LGDTKMGRSVHGYLYRTGLPMNVVVE--TSLVDMYAKVGFIEVASRVFSRMMFKT-AVSW 286
Query: 290 RALLSACRIHGKKELAEFAIANISRLESGDF 320
+L+S +G LA A + ++S F
Sbjct: 287 GSLISGFAQNG---LANKAFEAVVEMQSLGF 314
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 93/175 (53%), Gaps = 6/175 (3%)
Query: 48 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 107
V+D + +++ K G +R++F+ + +D+V WNT+I Y + + + LF
Sbjct: 349 VLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLK 408
Query: 108 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEK-RVKLNYILSAALVDMYAKCG 166
M + +EPD TFAS+++ + G + + +M+ K +++ + L+D+ A+ G
Sbjct: 409 MTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAG 468
Query: 167 RIDVSKQVFDTVARDH-VSVWNAMINGLAVH-GLALDAIAVFSRMEVENVLPDSI 219
R++ + + ++ D+ + +W A+++G H L++ IA +++ PDSI
Sbjct: 469 RVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLN---PDSI 520
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 187/333 (56%), Gaps = 5/333 (1%)
Query: 52 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 111
F + +++ KAG+ AR++F+ +P RDVV+ +I GY + + L +F + S
Sbjct: 189 FVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSE 248
Query: 112 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
+ P+ T+AS++T + L L + K H +L + + +L +L+DMY+KCG + +
Sbjct: 249 GMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYA 308
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVEN-VLPDSITFVGILKACSH 230
+++FD + WNAM+ G + HGL + + +F M E V PD++T + +L CSH
Sbjct: 309 RRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSH 368
Query: 231 CGLVNEGREHFNIM-QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 289
+ + G F+ M + +P EHYG +VD+LGRAG ++EA IK MP +P +
Sbjct: 369 GRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVL 428
Query: 290 RALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIG 346
+LL ACR+H ++ E + +E +G++V+LSN+Y S W + VR MM
Sbjct: 429 GSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQK 488
Query: 347 GVRKKRGKSWIELGDSIHQFNAADQSHAEMKAI 379
V K+ G+SWI+ ++H F+A D++H + +
Sbjct: 489 AVTKEPGRSWIQHEQTLHYFHANDRTHPRREEV 521
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 155/289 (53%), Gaps = 10/289 (3%)
Query: 17 GYATYPSLVAALISTYA-RCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDI---ARK 72
G+ Y +L+ A + A R Q AH + +R + + L L+ G+CD ARK
Sbjct: 51 GFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLP--ATYLRTRLLIFYGKCDCLEDARK 108
Query: 73 VFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGA 132
V D+MP ++VV+W +I Y + + L +F M+ ++ +P+ FTFA+V+T C R
Sbjct: 109 VLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASG 168
Query: 133 LCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMING 192
L K +HGL+++ + + ++L+DMYAK G+I ++++F+ + V A+I G
Sbjct: 169 LGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAG 228
Query: 193 LAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQ 251
A GL +A+ +F R+ E + P+ +T+ +L A S L++ G++ H ++++
Sbjct: 229 YAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFY 288
Query: 252 PQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
L++ +++D+ + GNL A + MP E + W A+L HG
Sbjct: 289 AVLQN--SLIDMYSKCGNLSYARRLFDNMP-ERTAISWNAMLVGYSKHG 334
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFS--KNLVIESLMKAG 65
+ H++ + Y TY SL+ AL H HV R + ++ +N +I+ K G
Sbjct: 244 RLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCG 303
Query: 66 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-VEPDGFTFASVV 124
AR++FD MP R ++WN ++ GY K+ + L LFR M + V+PD T +V+
Sbjct: 304 NLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVL 363
Query: 125 TGCAR-----LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA 179
+GC+ G V G K +Y +VDM + GRID + F+ +
Sbjct: 364 SGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY---GCIVDMLGRAGRID---EAFEFIK 417
Query: 180 R 180
R
Sbjct: 418 R 418
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 185/347 (53%), Gaps = 10/347 (2%)
Query: 57 VIESLMK----AGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 112
V S+MK G A +F M RD+++W+T+IGGY + +G + F M +
Sbjct: 347 VSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSG 406
Query: 113 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 172
+P F AS+++ + + + VH L L ++ N + ++L++MY+KCG I +
Sbjct: 407 TKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEAS 466
Query: 173 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 232
+F RD + AMING A HG + +AI +F + PDS+TF+ +L AC+H G
Sbjct: 467 MIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSG 526
Query: 233 LVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 292
++ G +FN+MQ + ++P EHYG MVDLL RAG L +A MI M + D V+W L
Sbjct: 527 QLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTL 586
Query: 293 LSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVR 349
L AC+ G E A I L+ + V L+N+Y S N A VR MK GV
Sbjct: 587 LIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVI 646
Query: 350 KKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRA---KFD 393
K+ G S I++ D + F + D+ H + + I+ +LE + A +FD
Sbjct: 647 KEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILELAVSGAEAHRFD 693
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 129/262 (49%), Gaps = 6/262 (2%)
Query: 44 VFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLR 103
+ ++VM F N + SL+ AG AR+VFDKMP D+V+W ++I YV + L
Sbjct: 33 ISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALI 92
Query: 104 LFRGM--LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDM 161
LF M + V PD + V+ C + + + +H ++ + + + ++L+DM
Sbjct: 93 LFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDM 152
Query: 162 YAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
Y + G+ID S +VF + + W A+I GL G + + FS M L D+ TF
Sbjct: 153 YKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTF 212
Query: 222 VGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 280
LKAC+ V G+ H +++ F+ + + ++ + G +++ + + M
Sbjct: 213 AIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVAN--SLATMYTECGEMQDGLCLFENM 270
Query: 281 PVEPDVVIWRALLSACRIHGKK 302
E DVV W +L+ A + G++
Sbjct: 271 S-ERDVVSWTSLIVAYKRIGQE 291
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 137/313 (43%), Gaps = 29/313 (9%)
Query: 15 VHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVF 74
+H YA SL++++ +V S ++D + + G+ D + +VF
Sbjct: 130 LHAYAVKTSLLSSV--------------YVGSSLLDMYKR---------VGKIDKSCRVF 166
Query: 75 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 134
+MP R+ VTW +I G V R+ +GL F M +E D +TFA + CA L +
Sbjct: 167 SEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVK 226
Query: 135 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLA 194
K +H ++ + ++ +L MY +CG + +F+ ++ V W ++I
Sbjct: 227 YGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYK 286
Query: 195 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQ 253
G + A+ F +M V P+ TF + AC+ + G + H N++ +
Sbjct: 287 RIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLS--LGLNDS 344
Query: 254 LEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA-CRI-HGKKELAEFAIAN 311
L +M+ + GNL A + + M D++ W ++ C+ G++ F+
Sbjct: 345 LSVSNSMMKMYSTCGNLVSASVLFQGMRCR-DIISWSTIIGGYCQAGFGEEGFKYFSWMR 403
Query: 312 ISRLESGDFVLLS 324
S + DF L S
Sbjct: 404 QSGTKPTDFALAS 416
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 131/297 (44%), Gaps = 33/297 (11%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDI 69
H +IV G+ T + +L + Y C + M+ G C
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGE------------------------MQDGLC-- 265
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
+F+ M RDVV+W +LI Y + + + + F M +++V P+ TFAS+ + CA
Sbjct: 266 ---LFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACAS 322
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-ARDHVSVWNA 188
L L + +H +L + + +S +++ MY+ CG + + +F + RD +S W+
Sbjct: 323 LSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIIS-WST 381
Query: 189 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 248
+I G G + FS M P +L + ++ GR+ + + F
Sbjct: 382 IIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQ-VHALALCF 440
Query: 249 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
++ +++++ + G+++EA +MI D+V A+++ HGK + A
Sbjct: 441 GLEQNSTVRSSLINMYSKCGSIKEA-SMIFGETDRDDIVSLTAMINGYAEHGKSKEA 496
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 95/253 (37%), Gaps = 47/253 (18%)
Query: 37 QPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNV 96
Q H F ++ ++ +I K G A +F + D+V+ +I GY ++
Sbjct: 432 QVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHG 491
Query: 97 RFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLE----KRVKLNY 152
+ + + LF L PD TF SV+T C G L +M E + K +Y
Sbjct: 492 KSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHY 551
Query: 153 ILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE 212
+VD+ + GR+ ++++ + ++ W
Sbjct: 552 ---GCMVDLLCRAGRLSDAEKMINEMS------WK------------------------- 577
Query: 213 NVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL-IQPQL-EHYGTMVDLLGRAGNL 270
D + + +L AC G + GR R L + P T+ ++ GNL
Sbjct: 578 ---KDDVVWTTLLIACKAKGDIERGRR----AAERILELDPTCATALVTLANIYSSTGNL 630
Query: 271 EEACNMIKAMPVE 283
EEA N+ K M +
Sbjct: 631 EEAANVRKNMKAK 643
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/342 (34%), Positives = 185/342 (54%), Gaps = 4/342 (1%)
Query: 54 KNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV 113
+N +I K + A VF + + TWN++I GY + + + L R ML A
Sbjct: 318 RNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGF 377
Query: 114 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNY-ILSAALVDMYAKCGRIDVSK 172
+P+ T AS++ CAR+ L + K H +L ++ +Y +L +LVD+YAK G+I +K
Sbjct: 378 QPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAK 437
Query: 173 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 232
QV D +++ + ++I+G G A+A+F M + PD +T V +L ACSH
Sbjct: 438 QVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSK 497
Query: 233 LVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 292
LV+EG F MQ + I+P L+H+ MVDL GRAG L +A ++I MP +P W L
Sbjct: 498 LVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATL 557
Query: 293 LSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVR 349
L+AC IHG ++ ++A + ++ G +VL++NMY + +W VR +M+ GV+
Sbjct: 558 LNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVK 617
Query: 350 KKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 391
K G +WI+ F+ D S E + +L+GL Q K
Sbjct: 618 KDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMK 659
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 132/311 (42%), Gaps = 7/311 (2%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGEC 67
H + V Y + + ALIS Y R IA +F R+ D S N VI G
Sbjct: 167 HGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMW 226
Query: 68 DIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 123
A ++FDKM V+TWN + GG ++ ++ L L M + D
Sbjct: 227 SEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIG 286
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
+ C+ +GA+ K +HGL + + L+ MY+KC + + VF + +
Sbjct: 287 LKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSL 346
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 243
WN++I+G A + +A + M V P+SIT IL C+ + G+E
Sbjct: 347 CTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCY 406
Query: 244 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 303
+ R + + ++VD+ ++G + A + + + D V + +L+ G+
Sbjct: 407 ILRRKCFKDYTMLWNSLVDVYAKSGKI-VAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGG 465
Query: 304 LAEFAIANISR 314
+A ++R
Sbjct: 466 VALALFKEMTR 476
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
A+ + + + + WN LI Y KN F + + ++ M+S + PD FT+ SV+ C
Sbjct: 97 AQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGE 156
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-ARDHVSVWNA 188
+ + VHG + K + + AL+ MY + + +++++FD + RD VS WNA
Sbjct: 157 TLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVS-WNA 215
Query: 189 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 232
+IN A G+ +A +F +M V IT+ I C G
Sbjct: 216 VINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 4/175 (2%)
Query: 121 ASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR 180
AS+++ C + A VH + V+ + +L LV Y+ + ++ + +
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 181 DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR-E 239
H WN +I A + L + IA + RM + + PD+ T+ +LKAC V GR
Sbjct: 107 LHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVV 166
Query: 240 HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 294
H +I + + + L ++ + R N+ A + M E D V W A+++
Sbjct: 167 HGSIEVSSY--KSSLYVCNALISMYKRFRNMGIARRLFDRM-FERDAVSWNAVIN 218
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 183/318 (57%), Gaps = 13/318 (4%)
Query: 50 DTFSKNLVIESLMKAGECDI-----ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRL 104
D KN + SLM +G I AR +F ++ RD+V WNTLI GY +N D +
Sbjct: 202 DIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDA 261
Query: 105 FRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK 164
F M EPD T +S+++ CA+ G L + VH L+ + ++LN +S AL+DMYAK
Sbjct: 262 FFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAK 321
Query: 165 CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGI 224
CG ++ + VF++++ V+ N+MI+ LA+HG +A+ +FS ME ++ PD ITF+ +
Sbjct: 322 CGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAV 381
Query: 225 LKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEP 284
L AC H G + EG + F+ M+ + ++P ++H+G ++ LLGR+G L+EA ++K M V+P
Sbjct: 382 LTACVHGGFLMEGLKIFSEMKTQD-VKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKP 440
Query: 285 DVVIWRALLSACRIHGKKELAEFAIANISRLES-------GDFVLLSNMYCSLKNWHNAE 337
+ + ALL AC++H E+AE + I S +SN+Y + W AE
Sbjct: 441 NDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAE 500
Query: 338 RVRNMMKIGGVRKKRGKS 355
+R M+ G+ K G S
Sbjct: 501 ALRVEMEKRGLEKSPGLS 518
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 150/317 (47%), Gaps = 20/317 (6%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGEC 67
H++ I G + + ++LIS Y +C A VF + + + N +I M G+
Sbjct: 69 HSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDA 128
Query: 68 DIARKVFDKMPV-RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTG 126
+A +F+++ V R+ VTW +I GY K + LF M F +V
Sbjct: 129 VLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM--------PFELKNVKAW 180
Query: 127 CARLGALCNAKWVHGL--MLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-ARDHV 183
LG N + + E + N + + ++ Y + G + ++ +F V ARD V
Sbjct: 181 SVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLV 240
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 243
+WN +I G A +G + DAI F M+ E PD++T IL AC+ G ++ GRE ++
Sbjct: 241 -IWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSL 299
Query: 244 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 303
+ +R + Q ++D+ + G+LE A ++ +++ V V +++S IHGK
Sbjct: 300 INHRGIELNQFVS-NALIDMYAKCGDLENATSVFESISVR-SVACCNSMISCLAIHGK-- 355
Query: 304 LAEFAIANISRLESGDF 320
+ A+ S +ES D
Sbjct: 356 -GKEALEMFSTMESLDL 371
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 13/191 (6%)
Query: 16 HGYATYPSLVAALISTYARCHQPHIAHHVFSRV------MDTFSKNLVIESLMKAGECDI 69
GY V++++S A+ + + V S + ++ F N +I+ K G+ +
Sbjct: 268 EGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLEN 327
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
A VF+ + VR V N++I + + + L +F M S +++PD TF +V+T C
Sbjct: 328 ATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVH 387
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV----SV 185
G L + M + VK N L+ + + G++ K+ + V HV +V
Sbjct: 388 GGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKL---KEAYRLVKEMHVKPNDTV 444
Query: 186 WNAMINGLAVH 196
A++ VH
Sbjct: 445 LGALLGACKVH 455
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 80/160 (50%), Gaps = 7/160 (4%)
Query: 136 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAV 195
K +H ++ V + ++ ++L+ MY KCG + +++VFD + +V+ WNAMI G
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMS 124
Query: 196 HGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLE 255
+G A+ A +F + +V +++T++ ++K + + RE F M ++
Sbjct: 125 NGDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFEL---KNVK 178
Query: 256 HYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
+ M+ + +E+A + +P E + +W ++S
Sbjct: 179 AWSVMLGVYVNNRKMEDARKFFEDIP-EKNAFVWSLMMSG 217
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 211/393 (53%), Gaps = 52/393 (13%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 67
K H I G+ + PS+ + I+ YA+ F + D
Sbjct: 393 KIHGLCIKTGFVSEPSVGNSFITLYAK----------FEALED----------------- 425
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
A+K F+ + R++++WN +I G+ +N + L++F +AE P+ +TF SV+
Sbjct: 426 --AKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAI 482
Query: 128 A-------RLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR 180
A + G C H +L+ + ++S+AL+DMYAK G ID S++VF+ +++
Sbjct: 483 AFAEDISVKQGQRC-----HAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQ 537
Query: 181 DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREH 240
+ VW ++I+ + HG + +F +M ENV PD +TF+ +L AC+ G+V++G E
Sbjct: 538 KNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEI 597
Query: 241 FNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
FN+M + ++P EHY MVD+LGRAG L+EA ++ +P P + +++L +CR+HG
Sbjct: 598 FNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHG 657
Query: 301 K----KELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSW 356
++AE A+ L SG +V + N+Y + W A +R M+ V K+ G SW
Sbjct: 658 NVKMGAKVAELAMEMKPEL-SGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSW 716
Query: 357 IELGD-----SIHQFNAADQSHAEMKAIHRVLE 384
I++GD ++ F++ D+SH + I+R++E
Sbjct: 717 IDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVE 749
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 127/248 (51%), Gaps = 10/248 (4%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRF-LDGLRLFRGMLSAEV 113
N I ++G AR+VFD+M +D+++WN+L+ G + F + + +FR M+ V
Sbjct: 213 NSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGV 272
Query: 114 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 173
E D +F SV+T C L A+ +HGL +++ + + L+ Y+KCG ++ K
Sbjct: 273 ELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKS 332
Query: 174 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 233
VF ++ +V W MI+ DA+++F M + V P+ +TFVG++ A
Sbjct: 333 VFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQ 387
Query: 234 VNEG-REHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 292
+ EG + H ++ F+ +P + + + + L + LE+A + + +++ W A+
Sbjct: 388 IKEGLKIHGLCIKTGFVSEPSVGN--SFITLYAKFEALEDAKKAFEDITFR-EIISWNAM 444
Query: 293 LSACRIHG 300
+S +G
Sbjct: 445 ISGFAQNG 452
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 115/242 (47%), Gaps = 6/242 (2%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N V+ KAG D A +F+ + DVV+WNT++ G+ N L M SA V
Sbjct: 115 NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVV 171
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
D FT+++ ++ C + +++ ++ + ++ + + MY++ G +++V
Sbjct: 172 FDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRV 231
Query: 175 FDTVARDHVSVWNAMINGLAVHG-LALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 233
FD ++ + WN++++GL+ G +A+ +F M E V D ++F ++ C H
Sbjct: 232 FDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETD 291
Query: 234 VNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
+ R+ + R + LE ++ + G LE ++ M E +VV W ++
Sbjct: 292 LKLARQIHGLCIKRGY-ESLLEVGNILMSRYSKCGVLEAVKSVFHQMS-ERNVVSWTTMI 349
Query: 294 SA 295
S+
Sbjct: 350 SS 351
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 118/252 (46%), Gaps = 12/252 (4%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N+++ K G + + VF +M R+VV+W T+I D + +F M V
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVY 369
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
P+ TF ++ + +HGL ++ + + + +YAK ++ +K+
Sbjct: 370 PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKA 429
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG-- 232
F+ + + WNAMI+G A +G + +A+ +F E +P+ TF +L A +
Sbjct: 430 FEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAE-TMPNEYTFGSVLNAIAFAEDI 488
Query: 233 LVNEG-REHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 291
V +G R H ++++ P + ++D+ + GN++E+ + M + + +W +
Sbjct: 489 SVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFNEMS-QKNQFVWTS 545
Query: 292 LLSACRIHGKKE 303
++SA HG E
Sbjct: 546 IISAYSSHGDFE 557
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 198/343 (57%), Gaps = 10/343 (2%)
Query: 55 NLVIESLMKAGECDIARKVFDKMP----VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 110
NL+I SL++ G+ D A+ +F +M + ++++W T++ G V+N + + R M
Sbjct: 480 NLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQE 539
Query: 111 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYI-LSAALVDMYAKCGRID 169
+ + P+ F+ ++ CA L +L + +HG ++ + + + +LVDMYAKCG I+
Sbjct: 540 SGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDIN 599
Query: 170 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
+++VF + + + NAMI+ A++G +AIA++ +E + PD+IT +L AC+
Sbjct: 600 KAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACN 659
Query: 230 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 289
H G +N+ E F + ++ ++P LEHYG MVDLL AG E+A +I+ MP +PD +
Sbjct: 660 HAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMI 719
Query: 290 RALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIG 346
++L+++C K EL ++ + E SG++V +SN Y +W ++R MMK
Sbjct: 720 QSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAK 779
Query: 347 GVRKKRGKSWIELG--DSIHQFNAADQSHAEMKAIHRVLEGLI 387
G++KK G SWI++ + +H F A D++H + I +L L+
Sbjct: 780 GLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLL 822
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 152/286 (53%), Gaps = 11/286 (3%)
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
K G + A VFD+M +DVVTWN +I GYV+ D + + + M +++ D T A+
Sbjct: 321 KVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLAT 380
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 182
+++ AR L K V + + + +L++ ++DMYAKCG I +K+VFD+
Sbjct: 381 LMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKD 440
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
+ +WN ++ A GL+ +A+ +F M++E V P+ IT+ I+ + G V+E ++ F
Sbjct: 441 LILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFL 500
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSAC--- 296
MQ+ +I P L + TM++ + + G EEA ++ M + P+ LSAC
Sbjct: 501 QMQSSGII-PNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHL 559
Query: 297 -RIHGKKELAEFAIANI--SRLESGDFVLLSNMYCSLKNWHNAERV 339
+H + + + I N+ S L S + L+ +MY + + AE+V
Sbjct: 560 ASLHIGRTIHGYIIRNLQHSSLVSIETSLV-DMYAKCGDINKAEKV 604
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 122/233 (52%), Gaps = 2/233 (0%)
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
K G D A KVFD++P R+ V WN L+ GYV+N + + +RLF M VEP T ++
Sbjct: 220 KCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVST 279
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 182
++ A +G + K H + + ++L+ IL +L++ Y K G I+ ++ VFD +
Sbjct: 280 CLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKD 339
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
V WN +I+G GL DAI + M +E + D +T ++ A + + G+E
Sbjct: 340 VVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKE-VQ 398
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
R + + T++D+ + G++ +A + + VE D+++W LL+A
Sbjct: 399 CYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAA 450
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 132/277 (47%), Gaps = 18/277 (6%)
Query: 50 DTFSKNLVIES--LMKAGECD---IARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRL 104
D +++N IE+ ++ +CD IA +F K+ VR+V +W +IG + L
Sbjct: 101 DFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMG 160
Query: 105 FRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK 164
F ML E+ PD F +V C L + VHG +++ ++ ++++L DMY K
Sbjct: 161 FVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGK 220
Query: 165 CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGI 224
CG +D + +VFD + + WNA++ G +G +AI +FS M + V P +T
Sbjct: 221 CGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTC 280
Query: 225 LKACSHCGLVNEGREH-----FNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKA 279
L A ++ G V EG++ N M+ ++ L ++ V L+ E M+
Sbjct: 281 LSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLI-------EYAEMVFD 333
Query: 280 MPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE 316
E DVV W ++S G E A + + + RLE
Sbjct: 334 RMFEKDVVTWNLIISGYVQQGLVEDAIY-MCQLMRLE 369
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 188/343 (54%), Gaps = 6/343 (1%)
Query: 53 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 112
S+ ++ ++ D + +VF + + V+W +LI G V+N R L FR M+
Sbjct: 304 SQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDS 363
Query: 113 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 172
++P+ FT +S + GC+ L + +HG++ + + + L+D+Y KCG D+++
Sbjct: 364 IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMAR 423
Query: 173 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 232
VFDT++ V N MI A +G +A+ +F RM + P+ +T + +L AC++
Sbjct: 424 LVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSR 483
Query: 233 LVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 292
LV EG E F+ + ++ +HY MVDLLGRAG LEEA M+ + PD+V+WR L
Sbjct: 484 LVEEGCELFDSFRKDKIMLTN-DHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTL 541
Query: 293 LSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVR 349
LSAC++H K E+AE I +E GD +L+SN+Y S W+ +++ MK ++
Sbjct: 542 LSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLK 601
Query: 350 KKRGKSWIELGDSIHQFNAADQ-SHAEMKAIHRVLEGLIQRAK 391
K SW+E+ H F A D SH + I LE LI+++K
Sbjct: 602 KNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSK 644
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 159/317 (50%), Gaps = 11/317 (3%)
Query: 41 AHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLD 100
AH + S S + ++++ +K G+ D AR+VFD M R +VTWN+LI +K+ R +
Sbjct: 89 AHMLKSGFPAEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKE 148
Query: 101 GLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKL-NYILSAALV 159
+ ++R M++ V PD +T +SV + L A+ HGL + +++ N + +ALV
Sbjct: 149 AVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALV 208
Query: 160 DMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSI 219
DMY K G+ +K V D V V + A+I G + G +A+ F M VE V P+
Sbjct: 209 DMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEY 268
Query: 220 TFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIK 278
T+ +L +C + + G+ H ++++ F + L +++ + R ++++ + K
Sbjct: 269 TYASVLISCGNLKDIGNGKLIHGLMVKSGF--ESALASQTSLLTMYLRCSLVDDSLRVFK 326
Query: 279 AMPVEPDVVIWRALLSACRIHGKKELA--EFAIANISRLESGDFVLLSNMYCSLKNWHNA 336
+ P+ V W +L+S +G++E+A EF ++ F L S +L+ N
Sbjct: 327 CIEY-PNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSS----ALRGCSNL 381
Query: 337 ERVRNMMKIGGVRKKRG 353
+I G+ K G
Sbjct: 382 AMFEEGRQIHGIVTKYG 398
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 116/221 (52%), Gaps = 1/221 (0%)
Query: 48 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 107
V + F + +++ +K G+ A+ V D++ +DVV LI GY + + ++ F+
Sbjct: 198 VSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQS 257
Query: 108 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 167
ML +V+P+ +T+ASV+ C L + N K +HGLM++ + +L+ MY +C
Sbjct: 258 MLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSL 317
Query: 168 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
+D S +VF + + W ++I+GL +G A+ F +M +++ P+S T L+
Sbjct: 318 VDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRG 377
Query: 228 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAG 268
CS+ + EGR+ I+ + + G ++DL G+ G
Sbjct: 378 CSNLAMFEEGRQIHGIVTKYGFDRDKYAGSG-LIDLYGKCG 417
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Query: 40 IAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFL 99
+ + F R D ++ + +I+ K G D+AR VFD + DV++ NT+I Y +N
Sbjct: 394 VTKYGFDR--DKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGR 451
Query: 100 DGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALV 159
+ L LF M++ ++P+ T SV+ C + + + ++ L A +V
Sbjct: 452 EALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMV 511
Query: 160 DMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 196
D+ + GR++ ++ + V + +W +++ VH
Sbjct: 512 DLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVH 548
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 193/344 (56%), Gaps = 8/344 (2%)
Query: 22 PSLVAALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPV 79
P+ LI Y C + +A F + + S +I K G+ A ++F M
Sbjct: 232 PASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSK 291
Query: 80 RDVVTWNTLIGGYVKNVRFLDGLRLFRGML--SAEVEPDGFTFASVVTGCARLGALCNAK 137
+D + ++ +I Y +N + D L+LF ML ++ ++PD T +SVV+ ++LG
Sbjct: 292 KDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGT 351
Query: 138 WVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHG 197
WV + E +K++ +LS +L+D+Y K G + ++F + + ++AMI G ++G
Sbjct: 352 WVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGING 411
Query: 198 LALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHY 257
+A +A ++F+ M + + P+ +TF G+L A SH GLV EG + FN M++ L +P +HY
Sbjct: 412 MATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNL-EPSADHY 470
Query: 258 GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLES 317
G MVD+LGRAG LEEA +IK+MP++P+ +W ALL A +H E E A ++ +LE+
Sbjct: 471 GIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLET 530
Query: 318 GDFVLLSNM---YCSLKNWHNAERVRNMMKIGGVRKKRGKSWIE 358
LS++ Y S+ W +A VR+ +K + K G SW+E
Sbjct: 531 DPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 137/297 (46%), Gaps = 18/297 (6%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGEC 67
HA+ + +G + L+ Y+R +A F + + T S N ++ +++GE
Sbjct: 127 HAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGEL 186
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
D AR+VFDK+P +D V+WN +I Y K + LF M P + ++ G
Sbjct: 187 DEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAM--PLKSPASWNI--LIGGY 242
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 187
+ A+ M +K N + ++ Y K G + ++++F +++ V++
Sbjct: 243 VNCREMKLARTYFDAMPQK----NGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYD 298
Query: 188 AMINGLAVHGLALDAIAVFSRMEVEN--VLPDSITFVGILKACSHCGLVNEGR--EHFNI 243
AMI +G DA+ +F++M N + PD IT ++ A S G + G E + I
Sbjct: 299 AMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESY-I 357
Query: 244 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
++ I L +++DL + G+ +A M + + D V + A++ C I+G
Sbjct: 358 TEHGIKIDDLLS--TSLIDLYMKGGDFAKAFKMFSNLN-KKDTVSYSAMIMGCGING 411
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/327 (17%), Positives = 134/327 (40%), Gaps = 59/327 (18%)
Query: 6 AAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAG 65
A + HA+L+V+ Y +P + H FS+N+V
Sbjct: 19 AKQVHAQLVVNRYNHL---------------EPILVHQTL-HFTKEFSRNIVT------- 55
Query: 66 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 125
+++ D +W L+ ++ +F + + ++ M ++ + P SV+
Sbjct: 56 ---YVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLR 112
Query: 126 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 185
C ++ + + K +H L+ + + LV +Y++ G I+++K+ FD +A +
Sbjct: 113 ACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVS 172
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK------ACS---------- 229
WN++++G G +A VF ++ ++ + ++ K ACS
Sbjct: 173 WNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSP 232
Query: 230 -----------HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIK 278
+C + R +F+ M + + + TM+ + G+++ A + +
Sbjct: 233 ASWNILIGGYVNCREMKLARTYFDAMPQKNGVS-----WITMISGYTKLGDVQSAEELFR 287
Query: 279 AMPVEPDVVIWRALLSACRIHGKKELA 305
M + D +++ A+++ +GK + A
Sbjct: 288 LMS-KKDKLVYDAMIACYTQNGKPKDA 313
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 204 bits (519), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 185/344 (53%), Gaps = 12/344 (3%)
Query: 46 SRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLF 105
S +MD +SK G + A +F+ D V+ ++ G +N + ++ F
Sbjct: 295 SALMDMYSK---------CGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFF 345
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
ML A VE D ++V+ +L K +H L+++++ N ++ L++MY+KC
Sbjct: 346 IRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKC 405
Query: 166 GRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL 225
G + S+ VF + + + WN+MI A HG L A+ ++ M V P +TF+ +L
Sbjct: 406 GDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLL 465
Query: 226 KACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 285
ACSH GL+++GRE N M+ I+P+ EHY ++D+LGRAG L+EA + I ++P++PD
Sbjct: 466 HACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPD 525
Query: 286 VVIWRALLSACRIHGKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNM 342
IW+ALL AC HG E+ E+A + + S +L++N+Y S W +
Sbjct: 526 CKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKR 585
Query: 343 MKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGL 386
MK GV K+ G S IE+ H F D+ H + +AI+ VL GL
Sbjct: 586 MKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGL 629
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 123/247 (49%), Gaps = 4/247 (1%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N +I S K G R VFD M R+V+T +I G ++N DGLRLF M V
Sbjct: 194 NKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVH 253
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
P+ T+ S + C+ + + +H L+ + ++ + +AL+DMY+KCG I+ + +
Sbjct: 254 PNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTI 313
Query: 175 FDTVAR-DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 233
F++ D VS+ ++ GLA +G +AI F RM V D+ +L
Sbjct: 314 FESTTEVDEVSM-TVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNS 372
Query: 234 VNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
+ G++ +++ R + G ++++ + G+L ++ + + MP + + V W +++
Sbjct: 373 LGLGKQLHSLVIKRKFSGNTFVNNG-LINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMI 430
Query: 294 SACRIHG 300
+A HG
Sbjct: 431 AAFARHG 437
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 123/254 (48%), Gaps = 9/254 (3%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N ++ K G+ A K+FD+MP+RDV++ N + G+++N G L + ML +
Sbjct: 94 NSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGS--- 150
Query: 115 PDGF---TFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
GF T V++ C K +H L + + L+ Y KCG
Sbjct: 151 -GGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSG 209
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 231
+ VFD ++ +V A+I+GL + L D + +FS M V P+S+T++ L ACS
Sbjct: 210 RGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGS 269
Query: 232 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 291
+ EG++ ++ ++ I+ +L ++D+ + G++E+A + ++ E D V
Sbjct: 270 QRIVEGQQIHALLW-KYGIESELCIESALMDMYSKCGSIEDAWTIFEST-TEVDEVSMTV 327
Query: 292 LLSACRIHGKKELA 305
+L +G +E A
Sbjct: 328 ILVGLAQNGSEEEA 341
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 192/386 (49%), Gaps = 5/386 (1%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAG 65
+ H K+I + SL A+I YA+C A +F + D+ + +I M G
Sbjct: 255 EVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHG 314
Query: 66 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 125
A +F +M + TWN +I G ++N + + FR M+ P+ T +S++
Sbjct: 315 LVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLP 374
Query: 126 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 185
L K +H + N ++ +++D YAK G + +++VFD +
Sbjct: 375 SLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIA 434
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 245
W A+I AVHG + A ++F +M+ PD +T +L A +H G + + F+ M
Sbjct: 435 WTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSML 494
Query: 246 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
++ I+P +EHY MV +L RAG L +A I MP++P +W ALL+ + G E+A
Sbjct: 495 TKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIA 554
Query: 306 EFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDS 362
FA + +E +G++ +++N+Y W AE VRN MK G++K G SWIE
Sbjct: 555 RFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKG 614
Query: 363 IHQFNAADQSHAEMKAIHRVLEGLIQ 388
+ F A D S K ++ ++EGL++
Sbjct: 615 LRSFIAKDSSCERSKEMYEIIEGLVE 640
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 143/294 (48%), Gaps = 46/294 (15%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D F N +I K + ARKVFD+M RDVV+WN++I GY ++ F D ++++ ML
Sbjct: 166 DVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAML 225
Query: 110 S-AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
+ ++ +P+G T SV C + L VH M+E ++++ L A++ YAKCG +
Sbjct: 226 ACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSL 285
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEV----------------- 211
D ++ +FD ++ + A+I+G HGL +A+A+FS ME
Sbjct: 286 DYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNN 345
Query: 212 --ENVL------------PDSITFVGILKACSHCGLVNEGRE--HFNIM----QNRFLIQ 251
E V+ P+++T +L + ++ + G+E F I N ++
Sbjct: 346 HHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTT 405
Query: 252 PQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
+++Y + LLG A + + C + ++ W A+++A +HG + A
Sbjct: 406 SIIDNYAKLGFLLG-AQRVFDNCK-------DRSLIAWTAIITAYAVHGDSDSA 451
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 147/327 (44%), Gaps = 25/327 (7%)
Query: 37 QPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNV 96
Q H VFS D F + +I + A VFD++ VR+ ++N L+ Y
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 97 RFLDGLRLFRGML------SAEVEPDGFTFASVV---TGCAR--LGALCNAKWVHGLMLE 145
+ D LF + S PD + + V+ +GC LG+L A+ VHG ++
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSL--ARQVHGFVIR 160
Query: 146 KRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAV 205
+ + ++ Y KC I+ +++VFD ++ V WN+MI+G + G D +
Sbjct: 161 GGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKM 220
Query: 206 FSRM-EVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDL 263
+ M + P+ +T + + +AC + G E H +++N IQ L ++
Sbjct: 221 YKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENH--IQMDLSLCNAVIGF 278
Query: 264 LGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGDFVLL 323
+ G+L+ A + M E D V + A++S HG L + A+A S +ES
Sbjct: 279 YAKCGSLDYARALFDEMS-EKDSVTYGAIISGYMAHG---LVKEAMALFSEMESIGLSTW 334
Query: 324 SNMYCSL-KNWHNAERV---RNMMKIG 346
+ M L +N H+ E + R M++ G
Sbjct: 335 NAMISGLMQNNHHEEVINSFREMIRCG 361
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 175/313 (55%), Gaps = 8/313 (2%)
Query: 53 SKNLVIESLM----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLF-RG 107
+K LV+ L+ K + + +F+++ +++WN++I G V++ R +F +
Sbjct: 380 TKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQM 439
Query: 108 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 167
ML+ + PD T AS++ GC++L L K +HG L + + AL+DMYAKCG
Sbjct: 440 MLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGN 499
Query: 168 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
++ VF ++ + WN+MI+G ++ GL A++ + M + + PD ITF+G+L A
Sbjct: 500 EVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSA 559
Query: 228 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 287
C+H G V+EG+ F M F I P L+HY MV LLGRA EA +I M ++PD
Sbjct: 560 CNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSA 619
Query: 288 IWRALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMK 344
+W ALLSAC IH + E+ E+ + L+ G +VL+SN+Y + W + RVRNMMK
Sbjct: 620 VWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMK 679
Query: 345 IGGVRKKRGKSWI 357
G G S I
Sbjct: 680 DNGYDGYLGVSQI 692
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 37 QPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNV 96
Q H+ R + + K ++ +K G A+ +FD+MP RD V WN LI GY +N
Sbjct: 73 QTHLTKSGLDRFV--YVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 97 RFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSA 156
D +LF ML P T +++ C + G + + VHG+ + ++L+ +
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKN 190
Query: 157 ALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLP 216
AL+ Y+KC + ++ +F + WN MI + GL +AI VF M +NV
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEI 250
Query: 217 DSITFVGILKA-CSH---------CGLVNE 236
+T + +L A SH CG+VN+
Sbjct: 251 SPVTIINLLSAHVSHEPLHCLVVKCGMVND 280
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 90/189 (47%), Gaps = 9/189 (4%)
Query: 116 DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF 175
D ++ GC + + +HG ++ + ++ L+ MY+K ++ +F
Sbjct: 346 DAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLF 405
Query: 176 DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKACSHCGLV 234
+ + + WN++I+G G A A VF +M + +LPD+IT +L CS +
Sbjct: 406 EQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCL 465
Query: 235 NEGRE-HFNIMQNRFLIQPQLEHY--GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 291
N G+E H ++N F + E++ ++D+ + GN +A ++ K++ P W +
Sbjct: 466 NLGKELHGYTLRNNF----ENENFVCTALIDMYAKCGNEVQAESVFKSIKA-PCTATWNS 520
Query: 292 LLSACRIHG 300
++S + G
Sbjct: 521 MISGYSLSG 529
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 134/306 (43%), Gaps = 14/306 (4%)
Query: 6 AAKTHAKLIVHGYATYPSLVAALISTYARC---HQPHIAHHVFSRV---MDTFSKNLVIE 59
A K ++ G++ + + L+ +C Q H V ++ +D+ KN +I
Sbjct: 135 AWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALIS 194
Query: 60 SLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFT 119
K E A +F +M + V+WNT+IG Y ++ + + +F+ M VE
Sbjct: 195 FYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVE----- 249
Query: 120 FASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA 179
S VT L A + + +H L+++ + + + +LV Y++CG + +++++ +
Sbjct: 250 -ISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAK 308
Query: 180 RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE 239
+D + ++++ A G A+ FS+ + D++ VGIL C ++ G
Sbjct: 309 QDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMS 368
Query: 240 HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIH 299
L L G ++ + + ++E + + + P ++ W +++S C
Sbjct: 369 LHGYAIKSGLCTKTLVVNG-LITMYSKFDDVETVLFLFEQLQETP-LISWNSVISGCVQS 426
Query: 300 GKKELA 305
G+ A
Sbjct: 427 GRASTA 432
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 103/237 (43%), Gaps = 8/237 (3%)
Query: 80 RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFT---FASVVTGCARLGALCNA 136
RD+ +++L+ + + +FR +L + + P+ FT F T L
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKL-QV 69
Query: 137 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 196
+ V + + + + +L+++Y K G + ++ +FD + VWNA+I G + +
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 197 GLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLE 255
G DA +F M + P + T V +L C CG V++GR H ++ + Q++
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 256 HYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANI 312
+ ++ + L A + + M + V W ++ A G +E A N+
Sbjct: 190 N--ALISFYSKCAELGSAEVLFREMK-DKSTVSWNTMIGAYSQSGLQEEAITVFKNM 243
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 204/393 (51%), Gaps = 18/393 (4%)
Query: 15 VHGYATY---------PSLVAALISTYARCHQPHIAHHVF---SRVMDTFSKNLVIESLM 62
VHGY+ P L AL+ YA+C AH +F S S N ++ +
Sbjct: 454 VHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYV 513
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
+G D A+ +F +M D+ TW+ ++ Y ++ + + +FR + + + P+ T +
Sbjct: 514 NSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMN 573
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYI-LSAALVDMYAKCGRIDVSKQVFDTVARD 181
++ CA+L +L + HG ++ R L I L L+D+YAKCG + + VF + AR
Sbjct: 574 LLPVCAQLASLHLVRQCHGYII--RGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARR 631
Query: 182 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 241
+ ++ AM+ G AVHG +A+ ++S M N+ PD + +L AC H GL+ +G + +
Sbjct: 632 DLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIY 691
Query: 242 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
+ ++ ++P +E Y VDL+ R G L++A + + MPVEP+ IW LL AC + +
Sbjct: 692 DSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNR 751
Query: 302 KELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIE 358
+L ++ + ES G+ VL+SNMY + W +RN+MK ++K G SW+E
Sbjct: 752 MDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLE 811
Query: 359 LGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 391
+ + F + D SH +I ++ L + K
Sbjct: 812 VDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMK 844
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 7/244 (2%)
Query: 57 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM-LSAEVEP 115
V+ K D +K+F +M D V WN ++ G + + +R F+ M + E +P
Sbjct: 62 VLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCG-RETMRFFKAMHFADEPKP 120
Query: 116 DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI-DVSKQV 174
TFA V+ C RLG N K +H +++ ++ + ++ ALV MYAK G I +
Sbjct: 121 SSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTA 180
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG-- 232
FD +A V WNA+I G + + + DA F M E P+ T +L C+
Sbjct: 181 FDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKN 240
Query: 233 -LVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 291
GR+ + + R +Q + ++V R G +EEA ++ M + D+V W
Sbjct: 241 IACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSK-DLVSWNV 299
Query: 292 LLSA 295
+++
Sbjct: 300 VIAG 303
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 119/253 (47%), Gaps = 9/253 (3%)
Query: 50 DTFSKNLVIESLMKAGEC-DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
DT N ++ K G A FD + +DVV+WN +I G+ +N D R F M
Sbjct: 156 DTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLM 215
Query: 109 LSAEVEPDGFTFASVVTGCARLG---ALCNAKWVHGLMLEKR-VKLNYILSAALVDMYAK 164
L EP+ T A+V+ CA + A + + +H ++++ ++ + + +LV Y +
Sbjct: 216 LKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLR 275
Query: 165 CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM-EVENVLPDSITFVG 223
GRI+ + +F + + WN +I G A + A +F + +V PDS+T +
Sbjct: 276 VGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIIS 335
Query: 224 ILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV 282
IL C+ + G+E H I+++ +L++ ++ R G+ A M
Sbjct: 336 ILPVCAQLTDLASGKEIHSYILRHSYLLE-DTSVGNALISFYARFGDTSAAYWAFSLMST 394
Query: 283 EPDVVIWRALLSA 295
+ D++ W A+L A
Sbjct: 395 K-DIISWNAILDA 406
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
DT N +I + G+ A F M +D+++WN ++ + + + L L +L
Sbjct: 365 DTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLL 424
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRV---KLNYILSAALVDMYAKCG 166
+ + D T S++ C + + K VHG ++ + + L AL+D YAKCG
Sbjct: 425 NEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCG 484
Query: 167 RI--------------------------------DVSKQVFDTVARDHVSVWNAMINGLA 194
+ D ++ +F ++ ++ W+ M+ A
Sbjct: 485 NVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYA 544
Query: 195 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQL 254
+AI VF ++ + P+++T + +L C+ ++ R+ + L +L
Sbjct: 545 ESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRL 604
Query: 255 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
+ GT++D+ + G+L+ A ++ ++ D+V++ A+++ +HG+ + A
Sbjct: 605 K--GTLLDVYAKCGSLKHAYSVFQS-DARRDLVMFTAMVAGYAVHGRGKEA 652
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 97 RFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYI--- 153
+F+ RL G + D F VV CA + L + + +HG + KL +I
Sbjct: 6 QFVQNFRLLSGFGT-----DHRVFLDVVKACASVSDLTSGRALHGCVF----KLGHIACS 56
Query: 154 -LSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRME-V 211
+S ++++MYAKC R+D +++F + VWN ++ GL+V + + F M
Sbjct: 57 EVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFA 115
Query: 212 ENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHY----GTMVDLLGRA 267
+ P S+TF +L C G G+ + ++I+ LE +V + +
Sbjct: 116 DEPKPSSVTFAIVLPLCVRLGDSYNGKS-----MHSYIIKAGLEKDTLVGNALVSMYAKF 170
Query: 268 GNLEEACNMIKAMPVEPDVVIWRALLSA 295
G + + DVV W A+++
Sbjct: 171 GFIFPDAYTAFDGIADKDVVSWNAIIAG 198
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 208/370 (56%), Gaps = 12/370 (3%)
Query: 27 ALISTYARCHQPHIAHHVFSRVM---DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVV 83
A+I+ YA+ ++ A +F +VM D S N +I ++ E + A +FD+MP ++V+
Sbjct: 238 AMITGYAQNNRIDEADQLF-QVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVI 296
Query: 84 TWNTLIGGYVKNVRFLDGLRLFRGML-SAEVEPDGFTFASVVTGCARLGALCNAKWVHGL 142
+W T+I GYV+N + L +F ML V+P+ T+ S+++ C+ L L + +H L
Sbjct: 297 SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQL 356
Query: 143 MLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDT---VARDHVSVWNAMINGLAVHGLA 199
+ + + N I+++AL++MY+K G + ++++FD RD +S WN+MI A HG
Sbjct: 357 ISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLIS-WNSMIAVYAHHGHG 415
Query: 200 LDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGT 259
+AI ++++M P ++T++ +L ACSH GLV +G E F + + + EHY
Sbjct: 416 KEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTC 475
Query: 260 MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRL---E 316
+VDL GRAG L++ N I + A+LSAC +H + +A+ + + +
Sbjct: 476 LVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDD 535
Query: 317 SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEM 376
+G +VL+SN+Y + A +R MK G++K+ G SW+++G H F D+SH +
Sbjct: 536 AGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQF 595
Query: 377 KAIHRVLEGL 386
+A+ +L L
Sbjct: 596 EALDSILSDL 605
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 119/240 (49%), Gaps = 19/240 (7%)
Query: 57 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS-AEVEP 115
+I L K G+ ARK+FD +P RDVVTW +I GY+K L +R R + +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIK----LGDMREARELFDRVDSRK 107
Query: 116 DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF 175
+ T+ ++V+G R L A+ + M E+ N + ++D YA+ GRID + ++F
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQSGRIDKALELF 163
Query: 176 DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVN 235
D + ++ WN+M+ L G +A+ +F RM +V +++ ++ + G V+
Sbjct: 164 DEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVD 219
Query: 236 EGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
E R F+ M R +I + M+ + ++EA + + MP E D W +++
Sbjct: 220 EARRLFDCMPERNIIS-----WNAMITGYAQNNRIDEADQLFQVMP-ERDFASWNTMITG 273
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 141/310 (45%), Gaps = 44/310 (14%)
Query: 26 AALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVV 83
A++S Y R Q IA +F + + S N +I+ ++G D A ++FD+MP R++V
Sbjct: 113 TAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV 172
Query: 84 TWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLM 143
+WN+++ V+ R + + LF M +V ++ ++V G A+ G + A+ + M
Sbjct: 173 SWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 144 LEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAI 203
E+ N I A++ YA+ RID + Q+F + + WN MI G + A
Sbjct: 229 PER----NIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKAC 284
Query: 204 AVFSRMEVENVL--------------------------------PDSITFVGILKACSHC 231
+F RM +NV+ P+ T+V IL ACS
Sbjct: 285 GLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDL 344
Query: 232 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMI-KAMPVEPDVVIWR 290
+ EG++ ++ ++ + Q ++++ ++G L A M + + D++ W
Sbjct: 345 AGLVEGQQIHQLI-SKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWN 403
Query: 291 ALLSACRIHG 300
++++ HG
Sbjct: 404 SMIAVYAHHG 413
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 201 bits (511), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 195/369 (52%), Gaps = 37/369 (10%)
Query: 26 AALISTYARCHQPHIAHHVFSRVMDT--FSKNLVIESLMKAGECDIARKVFDKMPVRDVV 83
AL+ Y + + A +F + + S N +++ L+K+G+ A+K+FD+MP RD++
Sbjct: 180 TALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDII 239
Query: 84 T-------------------------------WNTLIGGYVKNVRFLDGLRLFRGMLSAE 112
+ W+ LI GY +N + + ++F M +
Sbjct: 240 SYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKN 299
Query: 113 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLN-YILSAALVDMYAKCGRIDVS 171
V+PD F +++ C+++G + V + ++ K + + + AL+DM AKCG +D +
Sbjct: 300 VKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRA 359
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 231
++F+ + + + + +M+ G+A+HG +AI +F +M E ++PD + F ILK C
Sbjct: 360 AKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQS 419
Query: 232 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 291
LV EG +F +M+ ++ I +HY +V+LL R G L+EA +IK+MP E W +
Sbjct: 420 RLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGS 479
Query: 292 LLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGV 348
LL C +HG E+AE ++ LE +G +VLLSN+Y +L W + +R+ M G+
Sbjct: 480 LLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGI 539
Query: 349 RKKRGKSWI 357
K G+SWI
Sbjct: 540 TKICGRSWI 548
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 144/291 (49%), Gaps = 27/291 (9%)
Query: 20 TYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMK--AGEC-DI--ARKVF 74
T+P LV + S + H + R+ F K++V+ + G+C D+ ARKVF
Sbjct: 112 TFP-LVMKVCSNNGQVRVGSSVHGLVLRI--GFDKDVVVGTSFVDFYGKCKDLFSARKVF 168
Query: 75 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 134
+MP R+ V+W L+ YVK+ + +F M E + ++ ++V G + G L
Sbjct: 169 GEMPERNAVSWTALVVAYVKSGELEEAKSMFDLM----PERNLGSWNALVDGLVKSGDLV 224
Query: 135 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLA 194
NAK + ++ K + I +++D YAK G + ++ +F+ V W+A+I G A
Sbjct: 225 NAK----KLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYA 280
Query: 195 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG---LVNEGREHFNIMQNRFLIQ 251
+G +A VFS M +NV PD VG++ ACS G L + + + N+F
Sbjct: 281 QNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKF--- 337
Query: 252 PQLEHY--GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
HY ++D+ + G+++ A + + MP + D+V + +++ IHG
Sbjct: 338 --SSHYVVPALIDMNAKCGHMDRAAKLFEEMP-QRDLVSYCSMMEGMAIHG 385
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 73 VFDKMPVRDVVTWNTLIGGYVKNVRFLDGLR-LFRGMLSAEVEPDGFTFASVVTGCARLG 131
VF+++P WN LI GY F + + L R M + PD +TF V+ C+ G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 132 ALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC-------------------------- 165
+ VHGL+L + ++ + VD Y KC
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 166 -----GRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSIT 220
G ++ +K +FD + ++ WNA+++GL G ++A +F M ++ I+
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDI----IS 240
Query: 221 FVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 280
+ ++ + G + R+ F + + + ++ + G EA + M
Sbjct: 241 YTSMIDGYAKGGDMVSARDLFEEARG-----VDVRAWSALILGYAQNGQPNEAFKVFSEM 295
Query: 281 ---PVEPDVVIWRALLSACRIHGKKELAE 306
V+PD I L+SAC G EL E
Sbjct: 296 CAKNVKPDEFIMVGLMSACSQMGCFELCE 324
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 199 bits (505), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 178/320 (55%), Gaps = 13/320 (4%)
Query: 48 VMDTFSKNLVIESLM-----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGL 102
+ + N+V+ES + K G AR+VF+ M ++ V+W+ L+GGY +N +
Sbjct: 292 ITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAI 351
Query: 103 RLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMY 162
+FR M E D + F +V+ CA L A+ K +HG + + N I+ +AL+D+Y
Sbjct: 352 EIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLY 407
Query: 163 AKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFV 222
K G ID + +V+ ++ ++ WNAM++ LA +G +A++ F+ M + + PD I+F+
Sbjct: 408 GKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFI 467
Query: 223 GILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV 282
IL AC H G+V+EGR +F +M + I+P EHY M+DLLGRAG EEA N+++
Sbjct: 468 AILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAEC 527
Query: 283 EPDVVIWRALLSACRIHGK-KELAEFAIANISRLESG---DFVLLSNMYCSLKNWHNAER 338
D +W LL C + +AE + LE +VLLSNMY ++ +A
Sbjct: 528 RNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALN 587
Query: 339 VRNMMKIGGVRKKRGKSWIE 358
+R +M GV K G+SWI+
Sbjct: 588 IRKLMVRRGVAKTVGQSWID 607
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 129/238 (54%), Gaps = 9/238 (3%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-VEPDGFTFASVVTGCA 128
AR+VFD+MP DV+ W ++ + KN + + L LF M + + PDG TF +V+T C
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 129 RLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNA 188
L L K +HG ++ + N ++ ++L+DMY KCG + ++QVF+ +++ + W+A
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSA 336
Query: 189 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNR 247
++ G +G AI +F ME + D F +LKAC+ V G+E H ++
Sbjct: 337 LLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRG 392
Query: 248 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
+E ++DL G++G ++ A + M + +++ W A+LSA +G+ E A
Sbjct: 393 CFGNVIVE--SALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSALAQNGRGEEA 447
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 144/302 (47%), Gaps = 8/302 (2%)
Query: 9 THAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSK--NLVIESLMKAGE 66
TH+ I Y SL+ ++ H HV ++T N ++ K G
Sbjct: 52 THSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGP 111
Query: 67 -CDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 125
R+VFD V+D ++W +++ GYV + L +F M+S ++ + FT +S V
Sbjct: 112 GMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVK 171
Query: 126 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 185
C+ LG + + HG+++ + N+ +S+ L +Y +++VFD + V
Sbjct: 172 ACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVIC 231
Query: 186 WNAMINGLAVHGLALDAIAVFSRM-EVENVLPDSITFVGILKACSHCGLVNEGRE-HFNI 243
W A+++ + + L +A+ +F M + ++PD TF +L AC + + +G+E H +
Sbjct: 232 WTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKL 291
Query: 244 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 303
+ N +E +++D+ G+ G++ EA + M + + V W ALL +G+ E
Sbjct: 292 ITNGIGSNVVVE--SSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGGYCQNGEHE 348
Query: 304 LA 305
A
Sbjct: 349 KA 350
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 111/281 (39%), Positives = 167/281 (59%), Gaps = 3/281 (1%)
Query: 81 DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVH 140
DVV+W ++I G V N + F+ ML+ + P+ T +++ C L + + K +H
Sbjct: 252 DVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIH 311
Query: 141 GLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLAL 200
G + ++ + + +AL+DMY KCG I + +F + +N+MI A HGLA
Sbjct: 312 GYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLAD 371
Query: 201 DAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTM 260
A+ +F +ME D +TF IL ACSH GL + G+ F +MQN++ I P+LEHY M
Sbjct: 372 KAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACM 431
Query: 261 VDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE---S 317
VDLLGRAG L EA MIKAM +EPD+ +W ALL+ACR HG ELA A +++ LE S
Sbjct: 432 VDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENS 491
Query: 318 GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIE 358
G+ +LL+++Y + +W + R++ M+K R+ G SW+E
Sbjct: 492 GNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 151/330 (45%), Gaps = 47/330 (14%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDI 69
HA L+ G A + A L++ Y C +V+D
Sbjct: 39 HAHLVTSGIARLTRIAAKLVTFYVEC----------GKVLD------------------- 69
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
ARKVFD+MP RD+ +IG +N + + L FR M ++ D F S++
Sbjct: 70 ARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRN 129
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 189
L K +H L+L+ + + + ++L+DMY+K G + +++VF + + V+NAM
Sbjct: 130 LLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAM 189
Query: 190 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 249
I+G A + A +A+ + M++ + PD IT+ ++ SH + NE + I++ L
Sbjct: 190 ISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH--MRNEEKVS-EILELMCL 246
Query: 250 --IQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSACRI-----H 299
+P + + +++ L E+A + K M + P+ LL AC H
Sbjct: 247 DGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKH 306
Query: 300 GKKELAEFAIANISRLESGDFV--LLSNMY 327
G KE+ +++ ++ LE FV L +MY
Sbjct: 307 G-KEIHGYSV--VTGLEDHGFVRSALLDMY 333
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 121/277 (43%), Gaps = 44/277 (15%)
Query: 45 FSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRL 104
FS D F + +I+ K GE ARKVF + +D+V +N +I GY N + + L L
Sbjct: 146 FSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNL 205
Query: 105 FRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK 164
+ M ++PD T+ ++++G + + K++ IL +D Y
Sbjct: 206 VKDMKLLGIKPDVITWNALISGFSH--------------MRNEEKVSEILELMCLDGY-- 249
Query: 165 CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGI 224
+ V W ++I+GL + A F +M + P+S T + +
Sbjct: 250 ---------------KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITL 294
Query: 225 LKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG----TMVDLLGRAGNLEEACNMIKAM 280
L AC+ + G+E + + + LE +G ++D+ G+ G + EA + +
Sbjct: 295 LPACTTLAYMKHGKE-----IHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKT 349
Query: 281 PVEPDVVIWRALLSACRIHGKKELAEFAIANISRLES 317
P + V + +++ HG LA+ A+ ++E+
Sbjct: 350 P-KKTTVTFNSMIFCYANHG---LADKAVELFDQMEA 382
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 87/210 (41%), Gaps = 33/210 (15%)
Query: 119 TFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV 178
++ ++ R C + +H ++ + ++A LV Y +CG++ +++VFD +
Sbjct: 18 SYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEM 77
Query: 179 ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS--------- 229
+ +S MI A +G +++ F M + + D+ +LKA
Sbjct: 78 PKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGK 137
Query: 230 --HCGLVNEGREH--FNI-----MQNRF------------LIQPQLEHYGTMVDLLGRAG 268
HC ++ E F + M ++F L + L + M+
Sbjct: 138 MIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNS 197
Query: 269 NLEEACNMIKAMP---VEPDVVIWRALLSA 295
+EA N++K M ++PDV+ W AL+S
Sbjct: 198 QADEALNLVKDMKLLGIKPDVITWNALISG 227
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 197 bits (502), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 123/352 (34%), Positives = 182/352 (51%), Gaps = 15/352 (4%)
Query: 20 TYPSLVA----ALISTYARC-HQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVF 74
T SLV+ AL +C H + V+S D + +I K D+ +VF
Sbjct: 321 TIASLVSVCGDALKVNDGKCLHGWAVRQQVYS---DIIIETSLISMYAKCKRVDLCFRVF 377
Query: 75 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 134
W+ +I G V+N D L LF+ M +VEP+ T S++ A L L
Sbjct: 378 SGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLR 437
Query: 135 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH----VSVWNAMI 190
A +H + + + + LV +Y+KCG ++ + ++F+ + H V +W A+I
Sbjct: 438 QAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALI 497
Query: 191 NGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLI 250
+G +HG +A+ VF M V P+ ITF L ACSH GLV EG F M +
Sbjct: 498 SGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKT 557
Query: 251 QPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIA 310
+ HY +VDLLGRAG L+EA N+I +P EP +W ALL+AC H +L E A
Sbjct: 558 LARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAAN 617
Query: 311 NISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIEL 359
+ LE +G++VLL+N+Y +L W + E+VR+MM+ G+RKK G S IE+
Sbjct: 618 KLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 130/251 (51%), Gaps = 6/251 (2%)
Query: 54 KNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV 113
KN ++ +K G D AR VFD+M RDV+TW +I GY ++ + L L R M V
Sbjct: 256 KNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGV 315
Query: 114 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 173
P+ T AS+V+ C + + K +HG + ++V + I+ +L+ MYAKC R+D+ +
Sbjct: 316 RPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFR 375
Query: 174 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 233
VF ++ H W+A+I G + L DA+ +F RM E+V P+ T +L A +
Sbjct: 376 VFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALAD 435
Query: 234 VNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEA---CNMIKAMPVEPDVVIW 289
+ + H + + F+ L+ +V + + G LE A N I+ DVV+W
Sbjct: 436 LRQAMNIHCYLTKTGFM--SSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLW 493
Query: 290 RALLSACRIHG 300
AL+S +HG
Sbjct: 494 GALISGYGMHG 504
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 105/189 (55%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D + +N ++ M G+ ++AR VFD M RDV++WNT+I GY +N D L +F M+
Sbjct: 151 DKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMV 210
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
+ V+ D T S++ C L L + VH L+ EKR+ + ALV+MY KCGR+D
Sbjct: 211 NESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMD 270
Query: 170 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
++ VFD + R V W MING G +A+ + M+ E V P+++T ++ C
Sbjct: 271 EARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCG 330
Query: 230 HCGLVNEGR 238
VN+G+
Sbjct: 331 DALKVNDGK 339
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 120/241 (49%), Gaps = 9/241 (3%)
Query: 65 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE--PDGFTFAS 122
G ARK+F++MP ++++N +I YV+ + D + +F M+S V+ PDG+T+
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 182
V L ++ VHG +L + + AL+ MY G++++++ VFD +
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRD 182
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
V WN MI+G +G DA+ +F M E+V D T V +L C H + GR
Sbjct: 183 VISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK 242
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 302
+++ + L ++E +V++ + G ++EA + M DV+ W C I+G
Sbjct: 243 LVEEKRL-GDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITW-----TCMINGYT 295
Query: 303 E 303
E
Sbjct: 296 E 296
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 187/370 (50%), Gaps = 4/370 (1%)
Query: 15 VHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVF 74
H +A A L S Y Q H+ V +TF +I+ K G+ + AR F
Sbjct: 224 THTFAVMLRASAGLGSIYVG-KQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAF 282
Query: 75 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 134
+ MP + V WN +I GY + + L L M + V D FT + ++ +L L
Sbjct: 283 ECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLE 342
Query: 135 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLA 194
K H ++ + + + ALVD Y+K GR+D ++ VFD + R ++ WNA++ G A
Sbjct: 343 LTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYA 402
Query: 195 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQL 254
HG DA+ +F +M NV P+ +TF+ +L AC++ GL +G E F M I+P+
Sbjct: 403 NHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRA 462
Query: 255 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISR 314
HY M++LLGR G L+EA I+ P++ V +W ALL+ACR+ EL +
Sbjct: 463 MHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYG 522
Query: 315 L---ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQ 371
+ + G++V++ NMY S+ A V ++ G+ +W+E+GD H F + D+
Sbjct: 523 MGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDR 582
Query: 372 SHAEMKAIHR 381
+ + + R
Sbjct: 583 FDSYNETVKR 592
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 142/292 (48%), Gaps = 14/292 (4%)
Query: 17 GYATYPSLVAALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIA 70
G +TY +LV A I R V+ +M + + N ++ +K G A
Sbjct: 122 GVSTYDALVEACI----RLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDA 177
Query: 71 RKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARL 130
R++FD++P R++ ++ ++I G+V +++ LF+ M + + TFA ++ A L
Sbjct: 178 RRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGL 237
Query: 131 GALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMI 190
G++ K +H L+ V N +S L+DMY+KCG I+ ++ F+ + WN +I
Sbjct: 238 GSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVI 297
Query: 191 NGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFL 249
G A+HG + +A+ + M V D T +++ + + ++ H ++++N F
Sbjct: 298 AGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGF- 356
Query: 250 IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
+ ++ +VD + G ++ A + +P +++ W AL+ HG+
Sbjct: 357 -ESEIVANTALVDFYSKWGRVDTARYVFDKLP-RKNIISWNALMGGYANHGR 406
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 198/392 (50%), Gaps = 27/392 (6%)
Query: 11 AKLIVHGYATYPSLVAA---------------LISTYARCHQPHIAHHVFSRVM---DTF 52
AK +VH YA+ + +A +I+ Y + A +F RV D
Sbjct: 342 AKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKV 401
Query: 53 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 112
S +I+ ++AG+ A +F K+ +D VTW +I G V+N F + L M+
Sbjct: 402 SWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCG 461
Query: 113 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRV--KLNYILSAALVDMYAKCGRIDV 170
++P T++ +++ L K +H ++ + + IL +LV MYAKCG I+
Sbjct: 462 LKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIED 521
Query: 171 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 230
+ ++F + + WN+MI GL+ HGLA A+ +F M P+S+TF+G+L ACSH
Sbjct: 522 AYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSH 581
Query: 231 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 290
GL+ G E F M+ + IQP ++HY +M+DLLGRAG L+EA I A+P PD ++
Sbjct: 582 SGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYG 641
Query: 291 ALLSACRIH-------GKKELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMM 343
ALL C ++ G E A + + + + V L N+Y L + +R M
Sbjct: 642 ALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEM 701
Query: 344 KIGGVRKKRGKSWIELGDSIHQFNAADQSHAE 375
I GV+K G SW+ + + F + D+S +E
Sbjct: 702 GIKGVKKTPGCSWVVVNGRANVFLSGDKSASE 733
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 109/214 (50%), Gaps = 19/214 (8%)
Query: 27 ALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIAR-----KVFDKMPVRD 81
A+++ Y +C + + A +F + KN+V ++M CD R ++FD+MP R+
Sbjct: 113 AMLTGYVKCRRMNEAWTLFREM----PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERN 168
Query: 82 VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHG 141
VV+WNTL+ G ++N ++F M S +V ++ +++ G + AK + G
Sbjct: 169 VVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDV----VSWNAMIKGYIENDGMEEAKLLFG 224
Query: 142 LMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALD 201
M EK N + ++V Y + G + + ++F + ++ W AMI+G A + L +
Sbjct: 225 DMSEK----NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYRE 280
Query: 202 AIAVFSRM--EVENVLPDSITFVGILKACSHCGL 233
A+ +F M +V+ V P+ T + + AC G+
Sbjct: 281 ALMLFLEMKKDVDAVSPNGETLISLAYACGGLGV 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 27/243 (11%)
Query: 17 GYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVI--ESLM----KAGECDIA 70
G++ +L+ +S H A H+ ++ S N V+ SL+ K G D A
Sbjct: 41 GFSNEEALILRRLSEGGLVH----ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEA 96
Query: 71 RKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARL 130
R +F+ MP R++VT N ++ GYVK R + LFR M +VV+ L
Sbjct: 97 RVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK-----------NVVSWTVML 145
Query: 131 GALCNAKWVHGL--MLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNA 188
ALC+ + ++ + N + LV + G ++ +KQVFD + V WNA
Sbjct: 146 TALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNA 205
Query: 189 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 248
MI G + +A +F M +NV +T+ ++ G V E F M R
Sbjct: 206 MIKGYIENDGMEEAKLLFGDMSEKNV----VTWTSMVYGYCRYGDVREAYRLFCEMPERN 261
Query: 249 LIQ 251
++
Sbjct: 262 IVS 264
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 144 LEKRVKLNYILS-AALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDA 202
+ +R +N ++ +L+ YAK G +D ++ +F+ + ++ NAM+ G +A
Sbjct: 68 IPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEA 127
Query: 203 IAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVD 262
+F M +NV +++ +L A G + E F+ M R ++ + T+V
Sbjct: 128 WTLFREMP-KNV----VSWTVMLTALCDDGRSEDAVELFDEMPERNVVS-----WNTLVT 177
Query: 263 LLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGDFVL 322
L R G++E+A + AMP DVV W A++ + E A+ ++S +
Sbjct: 178 GLIRNGDMEKAKQVFDAMPSR-DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTS 236
Query: 323 LSNMYCSLKNWHNAERV 339
+ YC + A R+
Sbjct: 237 MVYGYCRYGDVREAYRL 253
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 195 bits (495), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 162/298 (54%), Gaps = 3/298 (1%)
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
K G +AR+V+D++P D V+ ++LI GY ++ DG LFR M+ + D F +S
Sbjct: 598 KCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISS 657
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 182
++ A VH + + + + ++L+ MY+K G ID + F +
Sbjct: 658 ILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPD 717
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
+ W A+I A HG A +A+ V++ M+ + PD +TFVG+L ACSH GLV E H N
Sbjct: 718 LIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLN 777
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 302
M + I+P+ HY MVD LGR+G L EA + I M ++PD ++W LL+AC+IHG+
Sbjct: 778 SMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEV 837
Query: 303 ELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWI 357
EL + A LE D ++ LSN+ + W E R +MK GV+K+ G S +
Sbjct: 838 ELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 122/241 (50%), Gaps = 6/241 (2%)
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
K G + + K+F +P +D W ++I G+ + + + LF ML PD T A+
Sbjct: 497 KCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAA 556
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR-D 181
V+T C+ +L K +HG L + L +ALV+MY+KCG + +++QV+D + D
Sbjct: 557 VLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELD 616
Query: 182 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-H 240
VS +++I+G + HGL D +F M + DS ILKA + + G + H
Sbjct: 617 PVSC-SSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVH 675
Query: 241 FNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
I + +P + +++ + + G++++ C + PD++ W AL+++ HG
Sbjct: 676 AYITKIGLCTEPSVG--SSLLTMYSKFGSIDDCCKAFSQIN-GPDLIAWTALIASYAQHG 732
Query: 301 K 301
K
Sbjct: 733 K 733
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 140/290 (48%), Gaps = 21/290 (7%)
Query: 20 TYPSLVAALISTYARCHQPHIAHHVFSRVM-----DTFSKNLVIESLMKAGECDIARKVF 74
TY S++AA A + V +RV+ D F +++ K G A +VF
Sbjct: 253 TYSSVLAAC----ASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVF 308
Query: 75 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 134
++P VV+W ++ GY K+ L +F+ M + VE + T SV++ C R +C
Sbjct: 309 SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVC 368
Query: 135 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF---DTVARDHVSVWNAMIN 191
A VH + + L+ ++AAL+ MY+K G ID+S+QVF D + R ++ N MI
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMIT 426
Query: 192 GLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLI 250
+ AI +F+RM E + D + +L S +N G++ H +++ ++
Sbjct: 427 SFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVL 483
Query: 251 QPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
L ++ L + G+LEE+ + + +P + D W +++S +G
Sbjct: 484 --DLTVGSSLFTLYSKCGSLEESYKLFQGIPFK-DNACWASMISGFNEYG 530
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 17/254 (6%)
Query: 23 SLVAALISTYARCHQPHIAHHVF----SRVMDTFSKNLVIESLMKAGECDIARKVFDKMP 78
+L A L S CH + + + S ++D FSKNL E A KVF
Sbjct: 162 ALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFED---------AYKVFRDSL 212
Query: 79 VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKW 138
+V WNT+I G ++N + LF M +PD +T++SV+ CA L L K
Sbjct: 213 SANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKV 272
Query: 139 VHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGL 198
V +++ + + + A+VD+YAKCG + + +VF + V W M++G
Sbjct: 273 VQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSND 331
Query: 199 ALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHY 257
A A+ +F M V ++ T ++ AC +V E + H + ++ F + +
Sbjct: 332 AFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVA-- 389
Query: 258 GTMVDLLGRAGNLE 271
++ + ++G+++
Sbjct: 390 AALISMYSKSGDID 403
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 39/298 (13%)
Query: 6 AAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAG 65
A++ HA + G+ S+ AALIS Y++ ++ VF + D +N+V
Sbjct: 370 ASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-------- 421
Query: 66 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV-- 123
N +I + ++ + +RLF ML + D F+ S+
Sbjct: 422 --------------------NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS 461
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
V C LG K VHG L+ + L+ + ++L +Y+KCG ++ S ++F +
Sbjct: 462 VLDCLNLG-----KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDN 516
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFN 242
+ W +MI+G +G +AI +FS M + PD T +L CS + G+E H
Sbjct: 517 ACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGY 576
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
+ R I ++ +V++ + G+L+ A + +P E D V +L+S HG
Sbjct: 577 TL--RAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-ELDPVSCSSLISGYSQHG 631
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 123/265 (46%), Gaps = 24/265 (9%)
Query: 43 HVFSRVM---DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFL 99
H+ R + D F ++ +G A K+FD +P DVV+ N +I GY ++ F
Sbjct: 73 HLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFE 132
Query: 100 DGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNY----ILS 155
+ LR F M E + ++ SV++ C+ L A L+ +K+ Y ++
Sbjct: 133 ESLRFFSKMHFLGFEANEISYGSVISACSAL----QAPLFSELVCCHTIKMGYFFYEVVE 188
Query: 156 AALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGL---AVHGLALDAIAVFSRMEVE 212
+AL+D+++K R + + +VF +V WN +I G +G D +F M V
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFD---LFHEMCVG 245
Query: 213 NVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHY--GTMVDLLGRAGNL 270
PDS T+ +L AC+ + G+ ++Q R + + + +VDL + G++
Sbjct: 246 FQKPDSYTYSSVLAACASLEKLRFGK----VVQARVIKCGAEDVFVCTAIVDLYAKCGHM 301
Query: 271 EEACNMIKAMPVEPDVVIWRALLSA 295
EA + +P P VV W +LS
Sbjct: 302 AEAMEVFSRIP-NPSVVSWTVMLSG 325
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 185/351 (52%), Gaps = 10/351 (2%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGEC 67
H + + G+ P + + + Y + +F +++ + N ++++ + GE
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE---VEPDGFTFASVV 124
D A + F +MPV DVV+W T+I G+ K L +F M+ E + P+ TF SV+
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 125 TGCARL--GALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 182
+ CA G + K +HG ++ K + L L AL+DMY K G ++++ +FD +
Sbjct: 229 SSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKK 288
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
V WNA+I+ LA +G A+ +F M+ V P+ IT + IL AC+ LV+ G + F+
Sbjct: 289 VCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFS 348
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 302
+ + + I P EHYG +VDL+GRAG L +A N I+++P EPD + ALL AC+IH
Sbjct: 349 SICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENT 408
Query: 303 ELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRK 350
EL + L+ G +V LS NW AE++R M G+RK
Sbjct: 409 ELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRK 459
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 122/280 (43%), Gaps = 44/280 (15%)
Query: 85 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 144
+NTLI Y+ + L LF ML++ V+P+ TF S++ ++ +HG L
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 145 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-------------------------- 178
++ + + + V Y + G ++ S+++FD +
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 179 ------ARDHVSVWNAMINGLAVHGLALDAIAVFSRM---EVENVLPDSITFVGILKACS 229
D VS W +ING + GL A+ VF M E + P+ TFV +L +C+
Sbjct: 174 YFQRMPVTDVVS-WTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 230 HC--GLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 286
+ G + G++ H +M ++ L ++D+ G+AG+LE A + + + V
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGT--ALLDMYGKAGDLEMALTIFDQIR-DKKV 289
Query: 287 VIWRALLSACRIHG--KKELAEFAIANISRLESGDFVLLS 324
W A++SA +G K+ L F + S + LL+
Sbjct: 290 CAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLA 329
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 189/351 (53%), Gaps = 10/351 (2%)
Query: 17 GYATYPSLVAALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGECDIARKVF 74
G+ ++ + AL+ Y AH VF + + + N++I L G+ + A
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 75 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-VEPDGFTFASVVTGCARLGAL 133
+KMP R VV+W T+I GY + + + + LF M++ + ++P+ T +++ LG L
Sbjct: 213 EKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDL 272
Query: 134 CNAKWVHGLMLEKR-VKLNYILSAALVDMYAKCGRIDVSKQVFDTV--ARDHVSVWNAMI 190
VH + ++ V + ++ +L+D YAKCG I + + F + R ++ W MI
Sbjct: 273 KMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMI 332
Query: 191 NGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEG-REHFNIMQNRFL 249
+ A+HG+ +A+++F ME + P+ +T + +L ACSH GL E E FN M N +
Sbjct: 333 SAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYK 392
Query: 250 IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAI 309
I P ++HYG +VD+L R G LEEA + +P+E V+WR LL AC ++ ELAE
Sbjct: 393 ITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVT 452
Query: 310 ANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWI 357
+ LE GD+VL+SN++C + +A+R R M + GV K G S +
Sbjct: 453 RKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 178/326 (54%), Gaps = 11/326 (3%)
Query: 72 KVFDKMP-VRDVVTWNTLIGGY-VKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
K+F +M RD+V WN +I + V + + LF + ++ PD +TF+SV+ CA
Sbjct: 324 KLFMEMSHCRDIVAWNGIITAFAVYDPE--RAIHLFGQLRQEKLSPDWYTFSSVLKACAG 381
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 189
L +A +H +++ + +L+ +L+ YAKCG +D+ +VFD + V WN+M
Sbjct: 382 LVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSM 441
Query: 190 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 249
+ ++HG + VF +M++ PDS TF+ +L ACSH G V EG F M +
Sbjct: 442 LKAYSLHGQVDSILPVFQKMDIN---PDSATFIALLSACSHAGRVEEGLRIFRSMFEKPE 498
Query: 250 IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAI 309
PQL HY ++D+L RA EA +IK MP++PD V+W ALL +CR HG L + A
Sbjct: 499 TLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAA 558
Query: 310 ANISRL----ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQ 365
+ L S ++ +SN+Y + +++ A M+ VRK+ SW E+G+ +H+
Sbjct: 559 DKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHE 618
Query: 366 FNAADQSHAEMKAIHRVLEGLIQRAK 391
F + + + +A++R L+ LI K
Sbjct: 619 FASGGRHRPDKEAVYRELKRLISWLK 644
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 91/189 (48%), Gaps = 8/189 (4%)
Query: 39 HIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRF 98
H+ H + + N +I K G AR+VFD MP R+VV+W LI GYV+
Sbjct: 84 HMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNE 143
Query: 99 LDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAAL 158
+G LF MLS P+ FT +SV+T C K VHGL L+ + + ++ A+
Sbjct: 144 QEGFCLFSSMLS-HCFPNEFTLSSVLTSCRYEP----GKQVHGLALKLGLHCSIYVANAV 198
Query: 159 VDMYAKCGRIDVSKQ---VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL 215
+ MY +C + + VF+ + ++ WN+MI L AI VF RM + V
Sbjct: 199 ISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVG 258
Query: 216 PDSITFVGI 224
D T + I
Sbjct: 259 FDRATLLNI 267
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
DT N +I + K G D+ +VFD M RDVV+WN+++ Y + + L +F+ M
Sbjct: 403 DTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM- 461
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKR---VKLNYILSAALVDMYAKCG 166
++ PD TF ++++ C+ G + + M EK +LN+ A ++DM ++
Sbjct: 462 --DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHY--ACVIDMLSRAE 517
Query: 167 RIDVSKQVFDTVARD-HVSVWNAMINGLAVHG 197
R +++V + D VW A++ HG
Sbjct: 518 RFAEAEEVIKQMPMDPDAVVWIALLGSCRKHG 549
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 166/328 (50%), Gaps = 36/328 (10%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGY-----VKNVRFL------------------------D 100
ARK+FD++P R+ V WN +I Y VK L D
Sbjct: 102 ARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTED 161
Query: 101 G----LRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSA 156
G + +R M+ +P+ T ++V+ C+ +GA K +H ++ + L +
Sbjct: 162 GSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKS 221
Query: 157 ALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLP 216
LV+ Y +CG I + VFD++ V W+++I+ A+HG A A+ F ME+ V P
Sbjct: 222 GLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTP 281
Query: 217 DSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM 276
D I F+ +LKACSH GL +E +F MQ + ++ +HY +VD+L R G EEA +
Sbjct: 282 DDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKV 341
Query: 277 IKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNW 333
I+AMP +P W ALL ACR +G+ ELAE A + +E ++VLL +Y S+
Sbjct: 342 IQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQ 401
Query: 334 HNAERVRNMMKIGGVRKKRGKSWIELGD 361
AER+R MK GV+ G SW D
Sbjct: 402 EEAERLRLKMKESGVKVSPGSSWCLFKD 429
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 115/280 (41%), Gaps = 40/280 (14%)
Query: 82 VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEP-DGFTFASVVTGCARLGALCNAKWVH 140
+++ + Y L LF M S+ P D F+ + CA VH
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 141 GLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLAL 200
++ N + AL+DMY KC + ++++FD + + + VWNAMI+ G
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 201 DAIAVFSRMEV---ENVL------------------------------PDSITFVGILKA 227
+A+ ++ M+V E+ P+ IT + ++ A
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 228 CSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 286
CS G +E H +N LI+P + +V+ GR G++ + +M + DV
Sbjct: 192 CSAIGAFRLIKEIHSYAFRN--LIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSME-DRDV 248
Query: 287 VIWRALLSACRIHGKKE--LAEFAIANISRLESGDFVLLS 324
V W +L+SA +HG E L F ++++ D L+
Sbjct: 249 VAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLN 288
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 185/343 (53%), Gaps = 12/343 (3%)
Query: 57 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEP- 115
+++ +K + A + F ++ + V+W+ +I GY + +F + ++ F+ + S
Sbjct: 326 LVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASIL 385
Query: 116 DGFTFASVVTGCARLGALCN-AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
+ FT+ S+ C+ L A CN VH +++ + + +AL+ MY+KCG +D + +V
Sbjct: 386 NSFTYTSIFQACSVL-ADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEV 444
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
F+++ + W A I+G A +G A +A+ +F +M + P+S+TF+ +L ACSH GLV
Sbjct: 445 FESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLV 504
Query: 235 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 294
+G+ + M ++ + P ++HY M+D+ R+G L+EA +K MP EPD + W+ LS
Sbjct: 505 EQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLS 564
Query: 295 ACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKK 351
C H EL E A + +L+ D +VL N+Y W A + +M ++K+
Sbjct: 565 GCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKE 624
Query: 352 RGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 394
SWI+ IH+F D+ H + + I+ L+ +FDG
Sbjct: 625 LSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLK------EFDG 661
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 129/296 (43%), Gaps = 36/296 (12%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 67
+ HA +I G + S+ +++ Y +C G
Sbjct: 205 QIHAHVIRAGLCSNTSIETGIVNMYVKC-----------------------------GWL 235
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
A++VFD+M V+ V L+ GY + R D L+LF +++ VE D F F+ V+ C
Sbjct: 236 VGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKAC 295
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 187
A L L K +H + + ++ + LVD Y KC + + + F + + W+
Sbjct: 296 ASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWS 355
Query: 188 AMINGLAVHGLALDAIAVFSRMEVENV-LPDSITFVGILKACSHCGLVNEGREHFNIMQN 246
A+I+G +A+ F + +N + +S T+ I +ACS N G +
Sbjct: 356 AIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIK 415
Query: 247 RFLIQPQLEHYG--TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
R LI Q YG ++ + + G L++A + ++M PD+V W A +S +G
Sbjct: 416 RSLIGSQ---YGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYG 467
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 130/275 (47%), Gaps = 9/275 (3%)
Query: 54 KNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV 113
+N V++ + + A K+FD+M + V+ T+I Y + + LF GML++
Sbjct: 121 QNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGD 180
Query: 114 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 173
+P + +++ AL + +H ++ + N + +V+MY KCG + +K+
Sbjct: 181 KPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKR 240
Query: 174 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 233
VFD +A ++ G G A DA+ +F + E V DS F +LKAC+
Sbjct: 241 VFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEE 300
Query: 234 VNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
+N G++ + + ++ ++ +VD + + E AC + + EP+ V W A++
Sbjct: 301 LNLGKQ-IHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EPNDVSWSAII 358
Query: 294 SACRIHGKKELAEF--AIANISRLESGDFVLLSNM 326
S G ++++F A+ L S + +L++
Sbjct: 359 S-----GYCQMSQFEEAVKTFKSLRSKNASILNSF 388
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 102/237 (43%), Gaps = 11/237 (4%)
Query: 20 TYPSLVAALISTYARCH---QPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDK 76
TY S+ A S A C+ Q H S + + ++ +I K G D A +VF+
Sbjct: 389 TYTSIFQA-CSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFES 447
Query: 77 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA 136
M D+V W I G+ + LRLF M+S ++P+ TF +V+T C+ G +
Sbjct: 448 MDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQG 507
Query: 137 KWVHGLMLEK-RVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV-WNAMINGLA 194
K ML K V ++D+YA+ G +D + + + + ++ W ++G
Sbjct: 508 KHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCW 567
Query: 195 VH-GLALDAIAVFSRMEVENVLP-DSITFVGILKACSHCGLVNEGREHFNIMQNRFL 249
H L L IA E+ + P D+ +V + G E E +M R L
Sbjct: 568 THKNLELGEIA---GEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERML 621
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 181/343 (52%), Gaps = 27/343 (7%)
Query: 40 IAHHVFSRVMDTFSKNLVIESLM----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVK- 94
I H + ++ + L+ +L+ K G+ ARKVFD+MP R VTWN +IGGY
Sbjct: 132 IVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSH 191
Query: 95 ------NVRFLDGLRLFR--GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLM--L 144
N R + LFR + V P T V++ ++ G L VHG + L
Sbjct: 192 KDKGNHNAR--KAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKL 249
Query: 145 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIA 204
+++ + ALVDMY+KCG ++ + VF+ + +V W +M GLA++G +
Sbjct: 250 GFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPN 309
Query: 205 VFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLL 264
+ +RM + P+ ITF +L A H GLV EG E F M+ RF + P +EHYG +VDLL
Sbjct: 310 LLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLL 369
Query: 265 GRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAE---FAIANISR------- 314
G+AG ++EA I AMP++PD ++ R+L +AC I+G+ + E A+ I R
Sbjct: 370 GKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSG 429
Query: 315 LESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWI 357
E D+V LSN+ W E++R MK ++ + G S++
Sbjct: 430 SECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 176/331 (53%), Gaps = 15/331 (4%)
Query: 26 AALISTYARCHQPHIAHHVFSRVMDT---FSKNLVIESLMKAGECDIARKVFDKMPVR-- 80
ALI Y++C A+ VF+ + DT S N VI +M G+ + A ++F+K+
Sbjct: 270 TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGL 329
Query: 81 --DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKW 138
D TWN+LI G+ + + ++ + F MLS + P S+++ C+ + L N K
Sbjct: 330 KPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKE 389
Query: 139 VHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV---ARDHVSVWNAMINGLAV 195
+HG +++ + + + +L+DMY KCG ++++FD +D V WN MI+G
Sbjct: 390 IHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPV-FWNVMISGYGK 448
Query: 196 HGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLE 255
HG AI +F + E V P TF +L ACSHCG V +G + F +MQ + +P E
Sbjct: 449 HGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTE 508
Query: 256 HYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRL 315
H G M+DLLGR+G L EA +I M V +LL +CR H L E A ++ L
Sbjct: 509 HIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAEL 567
Query: 316 E---SGDFVLLSNMYCSLKNWHNAERVRNMM 343
E FV+LS++Y +L+ W + E +R ++
Sbjct: 568 EPENPAPFVILSSIYAALERWEDVESIRQVI 598
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 115/211 (54%), Gaps = 7/211 (3%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKN--VRFLDGLRLFR 106
M+ + ++ + GE +A ++F+K+P + VVT+N I G ++N + + +
Sbjct: 162 MEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLM 221
Query: 107 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 166
S+E EP+ TF + +T CA L L + +HGL+++K + ++ AL+DMY+KC
Sbjct: 222 RKFSSE-EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCR 280
Query: 167 RIDVSKQVFDTV--ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGI 224
+ VF + R+ +S WN++I+G+ ++G A+ +F +++ E + PDS T+ +
Sbjct: 281 CWKSAYIVFTELKDTRNLIS-WNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSL 339
Query: 225 LKACSHCGLVNEGREHFNIMQNRFLIQPQLE 255
+ S G V E + F M + ++ P L+
Sbjct: 340 ISGFSQLGKVIEAFKFFERMLSVVMV-PSLK 369
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 128/260 (49%), Gaps = 9/260 (3%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
+D F+ ++ MK + A KV D+MP R + + N + G ++N D R+F
Sbjct: 64 VDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDA 123
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
+ + T ASV+ GC G + +H L ++ ++ + +LV MY++CG
Sbjct: 124 RVSGSGMNSVTVASVLGGC---GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEW 180
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM-EVENVLPDSITFVGILKA 227
++ ++F+ V V +NA I+GL +G+ +VF+ M + + P+ +TFV + A
Sbjct: 181 VLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITA 240
Query: 228 CSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGT-MVDLLGRAGNLEEACNMIKAMPVEPD 285
C+ + GR+ H +M+ F + + GT ++D+ + + A + + +
Sbjct: 241 CASLLNLQYGRQLHGLVMKKEFQFETMV---GTALIDMYSKCRCWKSAYIVFTELKDTRN 297
Query: 286 VVIWRALLSACRIHGKKELA 305
++ W +++S I+G+ E A
Sbjct: 298 LISWNSVISGMMINGQHETA 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
P+ FTF ++ CA+LG + + +H +++ ++ + ALV MY K ++ + +V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
D + ++ NA ++GL +G DA +F V +S+T +L CG +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGG---CGDI 145
Query: 235 NEGRE-HFNIMQNRFLIQPQLEHY-GT-MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 291
G + H M++ F ++E Y GT +V + R G A M + +P VV + A
Sbjct: 146 EGGMQLHCLAMKSGF----EMEVYVGTSLVSMYSRCGEWVLAARMFEKVP-HKSVVTYNA 200
Query: 292 LLSACRIHG 300
+S +G
Sbjct: 201 FISGLMENG 209
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 188 bits (477), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 175/332 (52%), Gaps = 4/332 (1%)
Query: 48 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 107
+DT + N +I K G D + +F++M RD+V+WN +I GY +NV L LF
Sbjct: 378 TLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEE 437
Query: 108 MLSAEVEP-DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 166
M V+ D FT S++ C+ GAL K +H +++ ++ ++ ALVDMY+KCG
Sbjct: 438 MKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCG 497
Query: 167 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 226
++ +++ FD+++ V W +I G HG A+ ++S + P+ + F+ +L
Sbjct: 498 YLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLS 557
Query: 227 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 286
+CSH G+V +G + F+ M F ++P EH +VDLL RA +E+A K P +
Sbjct: 558 SCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSI 617
Query: 287 VIWRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMM 343
+ +L ACR +GK E+ + ++ L+ GD +V L + + ++K W + N M
Sbjct: 618 DVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQM 677
Query: 344 KIGGVRKKRGKSWIELGDSIHQFNAADQSHAE 375
+ G++K G S IE+ F SH++
Sbjct: 678 RSLGLKKLPGWSKIEMNGKTTTFFMNHTSHSD 709
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 130/258 (50%), Gaps = 3/258 (1%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
+D K +I +K G+ + + +V + +P +DVV W +I G ++ R L +F M
Sbjct: 278 VDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEM 337
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
L + + ASVV CA+LG+ VHG +L L+ +L+ MYAKCG +
Sbjct: 338 LQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHL 397
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLP-DSITFVGILKA 227
D S +F+ + + WNA+I+G A + A+ +F M+ + V DS T V +L+A
Sbjct: 398 DKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQA 457
Query: 228 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 287
CS G + G+ I+ F I+P +VD+ + G LE A ++ + DVV
Sbjct: 458 CSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK-DVV 515
Query: 288 IWRALLSACRIHGKKELA 305
W L++ HGK ++A
Sbjct: 516 SWGILIAGYGFHGKGDIA 533
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 115/228 (50%), Gaps = 6/228 (2%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
A+ +FD+M RD+V+WNT+I GY + L+L M + PD TF + ++
Sbjct: 198 AKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGT 257
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 189
+ L + +H +++ ++ L AL+ MY KCG+ + S +V +T+ V W M
Sbjct: 258 MCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVM 317
Query: 190 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRF 248
I+GL G A A+ VFS M S ++ +C+ G + G H ++++ +
Sbjct: 318 ISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGY 377
Query: 249 -LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
L P L +++ + + G+L+++ + + M E D+V W A++S
Sbjct: 378 TLDTPALN---SLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISG 421
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 143/322 (44%), Gaps = 18/322 (5%)
Query: 3 STTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLM 62
ST ++ KL+ + T+PSL+ A S I V +++ FS + I S +
Sbjct: 32 STFSSMLANKLLPDTF-TFPSLLKACASLQRLSFGLSIHQQV---LVNGFSSDFYISSSL 87
Query: 63 -----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDG 117
K G ARKVF++M RDVV W +IG Y + + L M ++P
Sbjct: 88 VNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGP 147
Query: 118 FTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDT 177
T +++G + L + +H + + + +++++Y KC + +K +FD
Sbjct: 148 VTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQ 204
Query: 178 VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEG 237
+ + + WN MI+G A G + + + RM + + PD TF L + G
Sbjct: 205 MEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMG 264
Query: 238 RE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 296
R H I++ F + L+ ++ + + G E + +++ +P DVV W ++S
Sbjct: 265 RMLHCQIVKTGFDVDMHLK--TALITMYLKCGKEEASYRVLETIP-NKDVVCWTVMISGL 321
Query: 297 RIHGKKELAEFAIANISRLESG 318
G+ E A + + L+SG
Sbjct: 322 MRLGRAEKALIVFSEM--LQSG 341
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 40/228 (17%)
Query: 102 LRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDM 161
L F ML+ ++ PD FTF S++ CA L L +H +L ++ +S++LV++
Sbjct: 31 LSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNL 90
Query: 162 YAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
YAK G + +++VF+ + V W AMI + G+ +A ++ + M + + P +T
Sbjct: 91 YAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTL 150
Query: 222 VGILKA--------CSH------------------------CGLVNEGREHFNIMQNRFL 249
+ +L C H C V + ++ F+ M+ R +
Sbjct: 151 LEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDM 210
Query: 250 IQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLS 294
+ + TM+ GN+ E ++ M + PD + A LS
Sbjct: 211 VS-----WNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLS 253
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIM 244
+N+ IN L+ HG ++ FS M +LPD+ TF +LKAC+ ++ G H ++
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 245 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
N F ++V+L + G L A + + M E DVV W A++
Sbjct: 74 VNGF--SSDFYISSSLVNLYAKFGLLAHARKVFEEMR-ERDVVHWTAMI 119
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 173/314 (55%), Gaps = 9/314 (2%)
Query: 52 FSKNLVIESLMKAGECDI-----ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR 106
FS +L + S + D+ ARK+FD MPVRD V + + GGYV+ + GL +FR
Sbjct: 165 FSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFR 224
Query: 107 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 166
M + D S++ C +LGAL + K VHG + + L L A+ DMY KC
Sbjct: 225 EMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCS 284
Query: 167 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 226
+D + VF ++R V W+++I G + G + + +F M E + P+++TF+G+L
Sbjct: 285 ILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLS 344
Query: 227 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 286
AC+H GLV + +F +MQ + I P+L+HY ++ D + RAG LEEA ++ MPV+PD
Sbjct: 345 ACAHGGLVEKSWLYFRLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDE 403
Query: 287 VIWRALLSACRIHGKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMM 343
+ A+LS C+++G E+ E + +L ++ +V L+ +Y + + AE +R M
Sbjct: 404 AVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWM 463
Query: 344 KIGGVRKKRGKSWI 357
K + K G S I
Sbjct: 464 KEKQISKVPGCSSI 477
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 3/169 (1%)
Query: 73 VFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-VEPDGFTFASVVTGCARLG 131
VF MP R++ +WN +IG + ++ + LF M V PD FT ++ C+
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 132 ALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNAMI 190
+ +H L L+ + +S+ALV MY G++ ++++FD + RD V ++ AM
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSV-LYTAMF 207
Query: 191 NGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE 239
G G A+ +A+F M DS+ V +L AC G + G+
Sbjct: 208 GGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKS 256
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 194/384 (50%), Gaps = 9/384 (2%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAH--HVFSRVMDTFSKNLVIESLMKAG 65
+ HA+++ +G + + + ++ Y +C A H+ + +S + +I G
Sbjct: 281 EVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQG 340
Query: 66 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDG-LRLFRGMLSAEVE-PDGFTFASV 123
+ A+++FD + +++V W + GY+ N+R D L L R ++ E PD SV
Sbjct: 341 KMVEAKRLFDSLSEKNLVVWTAMFLGYL-NLRQPDSVLELARAFIANETNTPDSLVMVSV 399
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
+ C+ + K +HG L + ++ L A VDMY+KCG ++ ++++FD+
Sbjct: 400 LGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDT 459
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 243
++NAMI G A HG + F M PD ITF+ +L AC H GLV EG ++F
Sbjct: 460 VMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKS 519
Query: 244 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM-PVEPDVVIWRALLSACRIHGKK 302
M + I P+ HY M+DL G+A L++A +++ + VE D VI A L+AC +
Sbjct: 520 MIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNT 579
Query: 303 ELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIEL 359
EL + + +E + ++ ++N Y S W +R+R+ M+ + G SW +
Sbjct: 580 ELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANI 639
Query: 360 GDSIHQFNAADQSHAEMKAIHRVL 383
H F ++D SH E +AI+ +L
Sbjct: 640 DKQFHMFTSSDISHYETEAIYAML 663
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 156/332 (46%), Gaps = 43/332 (12%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFS----RVMDTFSKNLVIESLMK 63
+ H L+ G V++LI Y++C + ++F+ +D+ ++N +I + +
Sbjct: 146 QLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCR 205
Query: 64 AGECDIARKVFDKMP-VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
G+ D A VF + P + D ++WNTLI GY +N + L++ M ++ D +F +
Sbjct: 206 EGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGA 265
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV------------ 170
V+ + L +L K VH +L+ N +S+ +VD+Y KCG +
Sbjct: 266 VLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGN 325
Query: 171 -------------------SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEV 211
+K++FD+++ ++ VW AM G ++ D++ +R +
Sbjct: 326 LYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGY-LNLRQPDSVLELARAFI 384
Query: 212 ENV--LPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAG 268
N PDS+ V +L ACS + G+E H + ++ L+ +L VD+ + G
Sbjct: 385 ANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKL--VTAFVDMYSKCG 442
Query: 269 NLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
N+E A + + E D V++ A+++ C HG
Sbjct: 443 NVEYAERIFDS-SFERDTVMYNAMIAGCAHHG 473
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 138/328 (42%), Gaps = 65/328 (19%)
Query: 28 LISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGECDIARKVFDKMPV-RDVVT 84
L++ Y++ A +VF +++ +S N VI + +K AR++F+ RD++T
Sbjct: 29 LVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLIT 88
Query: 85 WNTLIGGYVKNVRFLDG-----LRLFRGMLSAEVEP---DGFTFASVVTGCARLGALCNA 136
+NTL+ G+ K DG + +F M E + D FT ++V A+L +
Sbjct: 89 YNTLLSGFAKT----DGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYG 144
Query: 137 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF--------DTVAR-------- 180
+ +HG++++ ++L+ MY+KCG+ +F D+VAR
Sbjct: 145 EQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYC 204
Query: 181 -------------------DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
D +S WN +I G A +G +A+ + ME + D +F
Sbjct: 205 REGDIDKALSVFWRNPELNDTIS-WNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSF 263
Query: 222 VGILKACSHCGLVNEGRE-HFNIMQ-----NRFLIQPQLE--------HYGTMVDLLGRA 267
+L S + G+E H +++ N+F+ ++ Y LL
Sbjct: 264 GAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGF 323
Query: 268 GNLEEACNMIKAMPVEPDVVIWRALLSA 295
GNL A +MI + +V + L +
Sbjct: 324 GNLYSASSMIVGYSSQGKMVEAKRLFDS 351
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 182/351 (51%), Gaps = 15/351 (4%)
Query: 18 YATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFS---KNLVIESLMKAGECDIARKVF 74
Y T+ SL++A R Q H + +V F ++ K+ AR+ F
Sbjct: 245 YFTFSSLLSA-----CRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECF 299
Query: 75 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 134
+ M VR+VV+WN +I G+ +N + +RLF ML ++PD TFASV++ CA+ A+
Sbjct: 300 ESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIW 359
Query: 135 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLA 194
K V ++ +K ++ +L+ Y++ G + + F ++ + W ++I LA
Sbjct: 360 EIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALA 419
Query: 195 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQL 254
HG A +++ +F M ++ + PD ITF+ +L ACSH GLV EG F M + I+ +
Sbjct: 420 SHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAED 478
Query: 255 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISR 314
EHY ++DLLGRAG ++EA +++ +MP EP A C IH K+E ++ +
Sbjct: 479 EHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLE 538
Query: 315 LESG---DFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKR-GKSWIELGD 361
+E ++ +LSN Y S +W+ A +R + K G SW LGD
Sbjct: 539 IEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSW--LGD 587
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 126/249 (50%), Gaps = 13/249 (5%)
Query: 52 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVK-----NVRFLDGLRLFR 106
F +N ++++ K E D A K+FD+MP+R++VTWN LI G ++ N R G
Sbjct: 72 FLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLS 131
Query: 107 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 166
+L +V D +F ++ C + +H LM+++ ++ + S +LV Y KCG
Sbjct: 132 RILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCG 191
Query: 167 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM--EVENVLPDSITFVGI 224
I +++VF+ V + +WNA+++ ++G+ +A + M + D TF +
Sbjct: 192 LIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSL 251
Query: 225 LKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEP 284
L AC + +G++ I+ + Q + ++++ ++ +L +A ++M V
Sbjct: 252 LSACR----IEQGKQIHAIL-FKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVR- 305
Query: 285 DVVIWRALL 293
+VV W A++
Sbjct: 306 NVVSWNAMI 314
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 29/189 (15%)
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 187
A L L + K HG M+++ + + L L+ Y K D + ++FD + ++ WN
Sbjct: 47 ASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWN 106
Query: 188 AMINGLA-----VHGLALDAIAVFSRMEVENVLPDSITFVGILKACS-----------HC 231
+I+G+ + A SR+ +V D ++F+G+++ C+ HC
Sbjct: 107 ILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHC 166
Query: 232 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 291
+V +G E ++V G+ G + EA + +A+ ++ D+V+W A
Sbjct: 167 LMVKQGLESSCFPST------------SLVHFYGKCGLIVEARRVFEAV-LDRDLVLWNA 213
Query: 292 LLSACRIHG 300
L+S+ ++G
Sbjct: 214 LVSSYVLNG 222
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 164/312 (52%), Gaps = 4/312 (1%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
+D +++++ G A K+F ++P +D++ ++ LI G VK+ LFR +
Sbjct: 375 LDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFREL 434
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
+ ++ D F ++++ C+ L +L K +HGL ++K + + + ALVDMY KCG I
Sbjct: 435 IKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEI 494
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
D +FD + V W +I G +G +A F +M + P+ +TF+G+L AC
Sbjct: 495 DNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSAC 554
Query: 229 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 288
H GL+ E R M++ + ++P LEHY +VDLLG+AG +EA +I MP+EPD I
Sbjct: 555 RHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTI 614
Query: 289 WRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKI 345
W +LL+AC H L + + D + LSN Y +L W +VR K
Sbjct: 615 WTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKK 674
Query: 346 GGVRKKRGKSWI 357
G K+ G SWI
Sbjct: 675 LGA-KESGMSWI 685
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 146/310 (47%), Gaps = 38/310 (12%)
Query: 37 QPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNV 96
Q H+ S+ + F N VI + A KVFD+M R++VTW T++ GY +
Sbjct: 28 QAHVIKQGISQ--NVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDG 85
Query: 97 RFLDGLRLFRGMLSAEVEP-DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS 155
+ + L+R ML +E E + F +++V+ C +G + V+ + ++ ++ + +L
Sbjct: 86 KPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLM 145
Query: 156 AALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL 215
++VDMY K GR+ + F + R + WN +I+G GL +A+ +F RM NV+
Sbjct: 146 NSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVV 205
Query: 216 --------------PDSITFV------GI----------LKACSHCGLVNEGRE-HFNIM 244
P ++ F+ G+ LKACS GL+ G++ H ++
Sbjct: 206 SWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVV 265
Query: 245 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMI--KAMPVEPDVVIWRALLSACRIHGKK 302
++ P ++D+ G+L A ++ + + V V +W ++LS I+ +
Sbjct: 266 KSGLESSPF--AISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEEN 323
Query: 303 ELAEFAIANI 312
E A + + I
Sbjct: 324 EAALWLLLQI 333
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 146/318 (45%), Gaps = 27/318 (8%)
Query: 24 LVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGECDIARKVFDKMPVRD 81
L+ +++ Y + + A+ F ++ + S N +I KAG D A +F +MP +
Sbjct: 144 LMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPN 203
Query: 82 VVTWNTLIGGYV-----KNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA 136
VV+WN LI G+V + + FL +R+ R L DGF + C+ G L
Sbjct: 204 VVSWNCLISGFVDKGSPRALEFL--VRMQREGLVL----DGFALPCGLKACSFGGLLTMG 257
Query: 137 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF---DTVARDHVSVWNAMINGL 193
K +H +++ ++ + +AL+DMY+ CG + + VF V+VWN+M++G
Sbjct: 258 KQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGF 317
Query: 194 AVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQ 253
++ A+ + ++ ++ DS T G LK C +N + + ++
Sbjct: 318 LINEENEAALWLLLQIYQSDLCFDSYTLSGALKIC-----INYVNLRLGLQVHSLVVVSG 372
Query: 254 LE-HY---GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAI 309
E Y +VDL GN+++A + +P D++ + L+ C G LA +
Sbjct: 373 YELDYIVGSILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSGFNSLAFYLF 431
Query: 310 ANISRLE-SGDFVLLSNM 326
+ +L D ++SN+
Sbjct: 432 RELIKLGLDADQFIVSNI 449
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 136/363 (37%), Gaps = 70/363 (19%)
Query: 4 TTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMK 63
T + H ++ G + P ++ALI Y+ C A VF + + L + S
Sbjct: 255 TMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQ------EKLAVNS--- 305
Query: 64 AGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 123
V WN+++ G++ N L L + +++ D +T +
Sbjct: 306 -----------------SVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGA 348
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
+ C L VH L++ +L+YI+ + LVD++A G I + ++F + +
Sbjct: 349 LKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDI 408
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS-------------- 229
++ +I G G A +F + + D ILK CS
Sbjct: 409 IAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGL 468
Query: 230 ---------------------HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAG 268
CG ++ G F+ M R ++ + ++ G+ G
Sbjct: 469 CIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVS-----WTGIIVGFGQNG 523
Query: 269 NLEEACNMIKAM---PVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGDFVLLSN 325
+EEA M +EP+ V + LLSACR G E A + + + E G L +
Sbjct: 524 RVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETM-KSEYGLEPYLEH 582
Query: 326 MYC 328
YC
Sbjct: 583 YYC 585
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 92/214 (42%), Gaps = 32/214 (14%)
Query: 127 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 186
C ++ A + + ++++ + N ++ ++ MY + + +VFD ++ ++ W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 187 NAMINGLAVHGLALDAIAVFSRM-EVENVLPDSITFVGILKACSHCG------LVNE--G 237
M++G G AI ++ RM + E + + +LKAC G LV E G
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 238 REHFN---IMQN-------------------RFLIQPQLEHYGTMVDLLGRAGNLEEACN 275
+E+ ++ N + +++P + T++ +AG ++EA
Sbjct: 135 KENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVT 194
Query: 276 MIKAMPVEPDVVIWRALLSACRIHGKKELAEFAI 309
+ MP +P+VV W L+S G EF +
Sbjct: 195 LFHRMP-QPNVVSWNCLISGFVDKGSPRALEFLV 227
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 170/313 (54%), Gaps = 8/313 (2%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N +I + K G+ + A +F++ +++++WN +I G+ N +GL F +L +EV
Sbjct: 425 NALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVR 484
Query: 115 --PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 172
PD +T +++++ C +L H +L ++ AL++MY++CG I S
Sbjct: 485 ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSL 544
Query: 173 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKACSHC 231
+VF+ ++ V WN++I+ + HG +A+ + M+ E V+PD+ TF +L ACSH
Sbjct: 545 EVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHA 604
Query: 232 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIK--AMPVEPDVVIW 289
GLV EG E FN M + ++H+ +VDLLGRAG+L+EA +++K + V +W
Sbjct: 605 GLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVW 664
Query: 290 RALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIG 346
AL SAC HG +L + + E D +V LSN+Y W AE R + +
Sbjct: 665 WALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMI 724
Query: 347 GVRKKRGKSWIEL 359
G K+RG SW+ L
Sbjct: 725 GAMKQRGCSWMRL 737
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 123/239 (51%), Gaps = 9/239 (3%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
A KVF+ + +D+VTWNT+I Y + + +++ M V+PD FTF S++
Sbjct: 342 AHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLD 401
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 189
L L + V +++ + +S AL+ Y+K G+I+ + +F+ R ++ WNA+
Sbjct: 402 LDVL---EMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAI 458
Query: 190 INGLAVHGLALDAIAVFS-RMEVE-NVLPDSITFVGILKAC-SHCGLVNEGREHFNIMQN 246
I+G +G + + FS +E E +LPD+ T +L C S L+ + H ++++
Sbjct: 459 ISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRH 518
Query: 247 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
+ + + ++++ + G ++ + + M E DVV W +L+SA HG+ E A
Sbjct: 519 GQFKETLIGN--ALINMYSQCGTIQNSLEVFNQMS-EKDVVSWNSLISAYSRHGEGENA 574
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 149/329 (45%), Gaps = 35/329 (10%)
Query: 2 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIE 59
D+ + H I G + + L+S Y R F + D +S ++
Sbjct: 72 DTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLS 131
Query: 60 SLMKAGECDIARKVFDKMPVRD-VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGF 118
+ K G+ + A +VFDKMP RD V WN +I G ++ + LFR M V D F
Sbjct: 132 ASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKF 191
Query: 119 TFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF--- 175
FA++++ C G+L K VH L+++ + + AL+ MY C + + VF
Sbjct: 192 GFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEET 250
Query: 176 DTVARDHVSVWNAMINGLAVHGLALD-AIAVFSRMEVENVLPDSITFVGILKACS----- 229
D RD V+ +N +I+GLA G D ++ VF +M ++ P +TFV ++ +CS
Sbjct: 251 DVAVRDQVT-FNVVIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMG 307
Query: 230 ---HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 286
H + G E + ++ N + Y + D G A + E+ E D+
Sbjct: 308 HQVHGLAIKTGYEKYTLVSN-----ATMTMYSSFED-FGAAHKVFESLE-------EKDL 354
Query: 287 VIWRALLSACRIHGKKELAEFAIANISRL 315
V W ++S+ + + +L + A++ R+
Sbjct: 355 VTWNTMISS---YNQAKLGKSAMSVYKRM 380
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 130/290 (44%), Gaps = 40/290 (13%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 67
+ H+ +I G+ S+V ALI+ Y C +V+++ + E
Sbjct: 210 QVHSLVIKAGFFIASSVVNALITMYFNCQ-------------------VVVDACLVFEET 250
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
D+A VRD VT+N +I G + + + L +FR ML A + P TF SV+ C
Sbjct: 251 DVA--------VRDQVTFNVVIDG-LAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSC 301
Query: 128 ARLGALCNA--KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 185
+ C A VHGL ++ + ++S A + MY+ + +VF+++ +
Sbjct: 302 S-----CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVT 356
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 245
WN MI+ L A++V+ RM + V PD TF +L ++ E
Sbjct: 357 WNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVL----EMVQACI 412
Query: 246 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
+F + ++E ++ + G +E+A +++ + +++ W A++S
Sbjct: 413 IKFGLSSKIEISNALISAYSKNGQIEKA-DLLFERSLRKNLISWNAIISG 461
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 103/240 (42%), Gaps = 37/240 (15%)
Query: 6 AAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAG 65
++THA ++ HG + ALI+ Y++C G
Sbjct: 508 GSQTHAYVLRHGQFKETLIGNALINMYSQC-----------------------------G 538
Query: 66 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML-SAEVEPDGFTFASVV 124
+ +VF++M +DVV+WN+LI Y ++ + + ++ M +V PD TF++V+
Sbjct: 539 TIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVL 598
Query: 125 TGCARLGALCNAKWVHGLMLE-KRVKLNYILSAALVDMYAKCGRIDVSK---QVFDTVAR 180
+ C+ G + + M+E V N + LVD+ + G +D ++ ++ +
Sbjct: 599 SACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIG 658
Query: 181 DHVSVWNAMINGLAVHG-LALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE 239
V VW A+ + A HG L L + ME E D +V + + G+ E E
Sbjct: 659 SRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEK--DDPSVYVQLSNIYAGAGMWKEAEE 716
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 193/381 (50%), Gaps = 28/381 (7%)
Query: 27 ALISTYARCHQPHIAHHVFSRVMDT------FSKNLVIESLMKAGECDIARKVFDKMP-- 78
++I+ Y + A+ +F+R+ D + N +I +K G+ A +F +M
Sbjct: 423 SMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKD 482
Query: 79 ---VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCN 135
R+ TWN +I GY++N + + L LFR M + P+ T S++ CA L
Sbjct: 483 GKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKM 542
Query: 136 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAV 195
+ +HG +L + + + + AL D YAK G I+ S+ +F + + WN++I G +
Sbjct: 543 VREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVL 602
Query: 196 HGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLE 255
HG A+A+F++M+ + + P+ T I+ A G V+EG++ F + N + I P LE
Sbjct: 603 HGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALE 662
Query: 256 HYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRL 315
H MV L GRA LEEA I+ M ++ + IW + L+ CRIHG ++A A N+ L
Sbjct: 663 HCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSL 722
Query: 316 ESGDFV---LLSNMYC-------SLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQ 365
E + ++S +Y SL+ N R N++K K G+SWIE+ + IH
Sbjct: 723 EPENTATESIVSQIYALGAKLGRSLEG--NKPRRDNLLK-----KPLGQSWIEVRNLIHT 775
Query: 366 FNAADQSHAEMKAIHRVLEGL 386
F DQS ++ ++E +
Sbjct: 776 FTTGDQSKLCTDVLYPLVEKM 796
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 119/249 (47%), Gaps = 7/249 (2%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 110
N++I + G+CD A + KM DV TW +I G + N L +FR M
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFL 345
Query: 111 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 170
A V P+ T S V+ C+ L + VH + ++ + ++ +LVDMY+KCG+++
Sbjct: 346 AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLED 405
Query: 171 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 230
+++VFD+V V WN+MI G G A +F+RM+ N+ P+ IT+ ++
Sbjct: 406 ARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIK 465
Query: 231 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE---PDVV 287
G E + F M+ +Q + ++ + G +EA + + M P+ V
Sbjct: 466 NGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSV 525
Query: 288 IWRALLSAC 296
+LL AC
Sbjct: 526 TILSLLPAC 534
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 134/283 (47%), Gaps = 7/283 (2%)
Query: 19 ATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGECDIARKVFDK 76
+TY L+ + I + H I H F D F + ++ K G ARKVFD
Sbjct: 82 STYLKLLESCIDS-GSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDS 140
Query: 77 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA 136
M R++ TW+ +IG Y + R+ + +LFR M+ V PD F F ++ GCA G +
Sbjct: 141 MRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAG 200
Query: 137 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 196
K +H ++++ + +S +++ +YAKCG +D + + F + V WN+++ +
Sbjct: 201 KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQN 260
Query: 197 GLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEH 256
G +A+ + ME E + P +T+ ++ + G + + M+ F I +
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMET-FGITADVFT 319
Query: 257 YGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSAC 296
+ M+ L G +A +M + M V P+ V + +SAC
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSAC 362
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 110/251 (43%), Gaps = 32/251 (12%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D N +++ K G+ + ARKVFD + +DV TWN++I GY + LF M
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
A + P+ T+ ++++G + G A +D++ + +
Sbjct: 446 DANLRPNIITWNTMISGYIKNGDEGEA----------------------MDLFQRMEK-- 481
Query: 170 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
D + + + WN +I G +G +A+ +F +M+ +P+S+T + +L AC+
Sbjct: 482 ------DGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACA 535
Query: 230 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 289
+ RE + R L + D ++G++E + + M + D++ W
Sbjct: 536 NLLGAKMVREIHGCVLRRNLDAIHAVK-NALTDTYAKSGDIEYSRTIFLGMETK-DIITW 593
Query: 290 RALLSACRIHG 300
+L+ +HG
Sbjct: 594 NSLIGGYVLHG 604
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)
Query: 121 ASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR 180
+ + +G LG + +A++ GL E V + L+ MYAKCG I +++VFD++
Sbjct: 90 SCIDSGSIHLGRILHARF--GLFTEPDV----FVETKLLSMYAKCGCIADARKVFDSMRE 143
Query: 181 DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREH 240
++ W+AMI + + +F M + VLPD F IL+ C++CG V G+
Sbjct: 144 RNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVI 203
Query: 241 FNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
+++ + + L +++ + + G L+ A + M E DV+ W ++L A +G
Sbjct: 204 HSVVI-KLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR-ERDVIAWNSVLLAYCQNG 261
Query: 301 KKELA 305
K E A
Sbjct: 262 KHEEA 266
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 186/342 (54%), Gaps = 6/342 (1%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N ++++ + + D A V M RD +T+ +L+ + + + L + M +
Sbjct: 466 NSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIR 525
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
D + ++ A LGAL K +H ++ + +LVDMY+KCG ++ +K+V
Sbjct: 526 MDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKV 585
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
F+ +A V WN +++GLA +G A++ F M ++ PDS+TF+ +L ACS+ L
Sbjct: 586 FEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLT 645
Query: 235 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 294
+ G E+F +M+ + I+PQ+EHY +V +LGRAG LEEA +++ M ++P+ +I++ LL
Sbjct: 646 DLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLR 705
Query: 295 ACRIHGKKELAEFAIAN----ISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRK 350
ACR G L E +AN ++ + ++LL+++Y A++ RN+M + K
Sbjct: 706 ACRYRGNLSLGE-DMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSK 764
Query: 351 KRGKSWIELGDSIHQFNAADQSHAE-MKAIHRVLEGLIQRAK 391
K GKS +E+ +H F + D + + I+ +E + + K
Sbjct: 765 KLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIK 806
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 115/226 (50%), Gaps = 3/226 (1%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
ARK+FD+M R V W +I + K+ F L LF M+++ P+ FTF+SVV CA
Sbjct: 77 ARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAG 136
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 189
L + VHG +++ + N ++ ++L D+Y+KCG+ + ++F ++ W M
Sbjct: 137 LRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMM 196
Query: 190 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 249
I+ L +A+ +S M V P+ TFV +L A S GL H NI+
Sbjct: 197 ISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIP 256
Query: 250 IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
+ L+ ++VD + +E+A ++ + E DV +W +++S
Sbjct: 257 LNVVLKT--SLVDFYSQFSKMEDAVRVLNSSG-EQDVFLWTSVVSG 299
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 120/237 (50%), Gaps = 3/237 (1%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
A +V + +DV W +++ G+V+N+R + + F M S ++P+ FT++++++ C+
Sbjct: 278 AVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSA 337
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV-SKQVFDTVARDHVSVWNA 188
+ +L K +H ++ + + + ALVDMY KC +V + +VF + +V W
Sbjct: 338 VRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTT 397
Query: 189 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 248
+I GL HG D + M V P+ +T G+L+ACS V E + R
Sbjct: 398 LILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH 457
Query: 249 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
+ ++ ++VD + ++ A N+I++M D + + +L++ GK E+A
Sbjct: 458 -VDGEMVVGNSLVDAYASSRKVDYAWNVIRSMK-RRDNITYTSLVTRFNELGKHEMA 512
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 119/240 (49%), Gaps = 6/240 (2%)
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
K G+ A ++F + D ++W +I V ++ + L+ + M+ A V P+ FTF
Sbjct: 171 KCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVK 230
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 182
++ + LG L K +H ++ + + LN +L +LVD Y++ +++ + +V ++
Sbjct: 231 LLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQD 289
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HF 241
V +W ++++G + A +A+ F M + P++ T+ IL CS ++ G++ H
Sbjct: 290 VFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHS 349
Query: 242 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLE-EACNMIKAMPVEPDVVIWRALLSACRIHG 300
++ F + + +VD+ + E EA + AM V P+VV W L+ HG
Sbjct: 350 QTIKVGF--EDSTDVGNALVDMYMKCSASEVEASRVFGAM-VSPNVVSWTTLILGLVDHG 406
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 120/250 (48%), Gaps = 9/250 (3%)
Query: 55 NLVIESLMKAGECDI-ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV 113
N +++ MK ++ A +VF M +VV+W TLI G V + D L M+ EV
Sbjct: 364 NALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV 423
Query: 114 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 173
EP+ T + V+ C++L + +H +L + V ++ +LVD YA ++D +
Sbjct: 424 EPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWN 483
Query: 174 VFDTVARDHVSVWNAMI---NGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 230
V ++ R + +++ N L H +AL +V + M + + D ++ G + A ++
Sbjct: 484 VIRSMKRRDNITYTSLVTRFNELGKHEMAL---SVINYMYGDGIRMDQLSLPGFISASAN 540
Query: 231 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 290
G + G+ H + + ++VD+ + G+LE+A + + + PDVV W
Sbjct: 541 LGALETGK-HLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT-PDVVSWN 598
Query: 291 ALLSACRIHG 300
L+S +G
Sbjct: 599 GLVSGLASNG 608
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 80/176 (45%), Gaps = 10/176 (5%)
Query: 127 CARLGALCNAKW------VHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR 180
C R+ + C + +H +++ + N L L+ +Y K I ++++FD ++
Sbjct: 27 CIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSH 86
Query: 181 DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE-GRE 239
V W MI+ A+++F M P+ TF ++++C+ ++ GR
Sbjct: 87 RTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRV 146
Query: 240 HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
H ++++ F + ++ DL + G +EAC + ++ D + W ++S+
Sbjct: 147 HGSVIKTGFEGNSVVG--SSLSDLYSKCGQFKEACELFSSLQ-NADTISWTMMISS 199
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 158/283 (55%), Gaps = 3/283 (1%)
Query: 6 AAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMK 63
+ H I G+ L+ Y +C +P VF ++ S ++ L+
Sbjct: 138 GTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVS 197
Query: 64 AGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 123
+ D A VF++MP+R+VV+W +I YVKN R + +LFR M +V+P+ FT ++
Sbjct: 198 NSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNL 257
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
+ +LG+L +WVH + L+ L AL+DMY+KCG + +++VFD + +
Sbjct: 258 LQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSL 317
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKACSHCGLVNEGREHFN 242
+ WN+MI L VHG +A+++F ME E +V PD+ITFVG+L AC++ G V +G +F
Sbjct: 318 ATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFT 377
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 285
M + I P EH M+ LL +A +E+A N++++M +PD
Sbjct: 378 RMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 124/276 (44%), Gaps = 40/276 (14%)
Query: 65 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLF-RGMLSAEVEPDGFTFASV 123
GE A VF+++ TWN +I N + + L LF M+S + + D FTF V
Sbjct: 66 GETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFV 125
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
+ C ++ VHGL ++ + L+D+Y KCG+ D ++VFD + +
Sbjct: 126 IKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSI 185
Query: 184 SVWNAMINGLAVHGLALD--------------------------------AIAVFSRMEV 211
W M+ GL V LD A +F RM+V
Sbjct: 186 VSWTTMLYGL-VSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQV 244
Query: 212 ENVLPDSITFVGILKACSHCGLVNEGR-EHFNIMQNRFLIQPQLEHYGT-MVDLLGRAGN 269
++V P+ T V +L+A + G ++ GR H +N F++ L GT ++D+ + G+
Sbjct: 245 DDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFL---GTALIDMYSKCGS 301
Query: 270 LEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
L++A + M + + W +++++ +HG E A
Sbjct: 302 LQDARKVFDVMQGK-SLATWNSMITSLGVHGCGEEA 336
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 169/299 (56%), Gaps = 12/299 (4%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D + N ++ K G+ AR VFD +P +D V+WN+++ GY+ + + L +FR M+
Sbjct: 229 DVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMV 288
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
+EPD +SV+ AR+ + + + +HG ++ + ++ ++ AL+ +Y+K G++
Sbjct: 289 QNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLG 345
Query: 170 VSKQVFDT-VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
+ +FD + RD VS WNA+I + H + + F +M N PD ITFV +L C
Sbjct: 346 QACFIFDQMLERDTVS-WNAII---SAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLC 401
Query: 229 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMI-KAMPVEPDVV 287
++ G+V +G F++M + I P++EHY MV+L GRAG +EEA +MI + M +E
Sbjct: 402 ANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPT 461
Query: 288 IWRALLSACRIHGKKELAEFAIANISRLESG---DFVLLSNMYCSLKNWHNAERVRNMM 343
+W ALL AC +HG ++ E A + LE +F LL +Y K + ERVR MM
Sbjct: 462 VWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMM 520
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 143/287 (49%), Gaps = 19/287 (6%)
Query: 20 TYPSLVAALIST-YARCHQPH--IAHHVFSRVMDTFSKNLVIESLM-----KAGECDIAR 71
T P + A+L+ T Y+ H HH+ + NL I S + G ++A
Sbjct: 90 TEPEIFASLLETCYSLRAIDHGVRVHHLIPPYL--LRNNLGISSKLVRLYASCGYAEVAH 147
Query: 72 KVFDKMPVRD--VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
+VFD+M RD WN+LI GY + ++ D + L+ M V+PD FTF V+ C
Sbjct: 148 EVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGG 207
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNA 188
+G++ + +H ++++ + + ALV MYAKCG I ++ VFD + +D+VS WN+
Sbjct: 208 IGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVS-WNS 266
Query: 189 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 248
M+ G HGL +A+ +F M + PD + +L + GR+ + R
Sbjct: 267 MLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRG 323
Query: 249 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
+ + +L ++ L + G L +AC + M +E D V W A++SA
Sbjct: 324 M-EWELSVANALIVLYSKRGQLGQACFIFDQM-LERDTVSWNAIISA 368
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 180/363 (49%), Gaps = 8/363 (2%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGEC 67
H + I HG + +L+ Y C +A +F + D S N +I +++ G+
Sbjct: 141 HGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDV 200
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
A K+FD+MP +++++WN +I Y+ + LFR M+ A + + T ++ C
Sbjct: 201 LAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNAC 260
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 187
R L + VH ++ + + ++ AL+DMY KC + +++++FD+++ + WN
Sbjct: 261 GRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWN 320
Query: 188 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 247
MI +HG + +F M + PD +TFVG+L C+ GLV++G+ ++++M +
Sbjct: 321 VMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDE 380
Query: 248 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSACRIHGKKEL 304
F I+P H M +L AG EEA +K +P V P+ W LLS+ R G L
Sbjct: 381 FQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTL 440
Query: 305 AEF---AIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGD 361
E ++ L + LL N+Y W + RVR M+K + + G ++L +
Sbjct: 441 GESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKE 500
Query: 362 SIH 364
+H
Sbjct: 501 IVH 503
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 113/272 (41%), Gaps = 39/272 (14%)
Query: 86 NTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLE 145
N + Y+ + L + +L PD +TF S+++ + + + K HG ++
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 146 KRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAV 205
+ +L+ MY CG +D++K++F + + + WN++I G+ +G L A +
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 206 FSRMEVENVLPDSI-------------------------------TFVGILKACSHCGLV 234
F M +N++ +I T V +L AC +
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 235 NEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
EGR H +++ R + + ++D+ G+ + A + ++ + + V W ++
Sbjct: 267 KEGRSVHASLI--RTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIR-NKVTWNVMI 323
Query: 294 SACRIHGKK----ELAEFAIANISRLESGDFV 321
A +HG+ EL E I + R + FV
Sbjct: 324 LAHCLHGRPEGGLELFEAMINGMLRPDEVTFV 355
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 161/300 (53%), Gaps = 5/300 (1%)
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
+ G ++R +F+ VRDVV W+++I GY + + + L M +E + T +
Sbjct: 299 RCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLA 358
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 182
+V+ C L A VH +L+ + +L AL+DMYAKCG + +++VF +
Sbjct: 359 IVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKD 418
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
+ W++MIN +HG +A+ +F M D + F+ IL AC+H GLV E + F
Sbjct: 419 LVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT 478
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 302
++ + LEHY ++LLGR G +++A + MP++P IW +LLSAC HG+
Sbjct: 479 -QAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRL 537
Query: 303 ELAEFAIAN-ISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIE 358
++A IAN + + E ++VLLS ++ N+H AE VR +M+ + K G S IE
Sbjct: 538 DVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 149/305 (48%), Gaps = 13/305 (4%)
Query: 6 AAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVF-------SRVMDT-FSKNLV 57
A K ++ +G+ LVA+L++ R +F R+ ++ +
Sbjct: 132 AMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTAL 191
Query: 58 IESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDG 117
++ +K + A VFD+M V++ V+W +I G V N + G+ LFR M + P+
Sbjct: 192 VDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNR 251
Query: 118 FTFASVVTGCARLGALCN-AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 176
T SV+ C L + K +HG + L+AA + MY +CG + +S+ +F+
Sbjct: 252 VTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFE 311
Query: 177 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 236
T V +W++MI+G A G + + + ++M E + +S+T + I+ AC++ L++
Sbjct: 312 TSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSF 371
Query: 237 GRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
H I++ F+ L + ++D+ + G+L A + + E D+V W ++++A
Sbjct: 372 ASTVHSQILKCGFMSHILLGN--ALIDMYAKCGSLSAAREVFYEL-TEKDLVSWSSMINA 428
Query: 296 CRIHG 300
+HG
Sbjct: 429 YGLHG 433
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 114/248 (45%), Gaps = 3/248 (1%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
DT N +I K RKVFD+M RD V++ ++I ++ + ++L + M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 110 SAEVEPDGFTFASVVTGCARLGALCN-AKWVHGLML-EKRVKLNYILSAALVDMYAKCGR 167
P AS++ C R+G+ A+ H L+L ++R++ + +LS ALVDMY K
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDD 200
Query: 168 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
+ VFD + + W AMI+G + + +F M+ EN+ P+ +T + +L A
Sbjct: 201 HAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPA 260
Query: 228 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 287
C + + + R + + R GN+ + + + V DVV
Sbjct: 261 CVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVR-DVV 319
Query: 288 IWRALLSA 295
+W +++S
Sbjct: 320 MWSSMISG 327
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N +I+ K G AR+VF ++ +D+V+W+++I Y + + L +F+GM+ E
Sbjct: 392 NALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHE 451
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
D F ++++ C G + A+ + + + + A +++ + G+ID + +V
Sbjct: 452 VDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEV 511
Query: 175 -FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDS-ITFVGILKACSHCG 232
+ + +W+++++ HG LD E+ PD+ +V + K + G
Sbjct: 512 TINMPMKPSARIWSSLLSACETHG-RLDVAGKIIANELMKSEPDNPANYVLLSKIHTESG 570
Query: 233 LVNEGREHFNIMQNRFL--------IQPQLE 255
+ E +MQ R L I+P+L+
Sbjct: 571 NYHAAEEVRRVMQRRKLNKCYGFSKIEPELQ 601
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 89 IGGYVKNVRFLDGLRLFRGMLSAEVEPDGFT--FASVVTGCA-RLGALCNAKWVHGLMLE 145
+ G V + + + LRL++ + + + +GFT SV+ CA + +H L L+
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHS-LGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLK 75
Query: 146 KRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNAMINGLAVHGLALDAIA 204
+ ++S +L+ MYAK R ++VFD + RD VS + ++IN GL +A+
Sbjct: 76 AGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVS-YCSIINSCCQDGLLYEAMK 134
Query: 205 VFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI-------MQNRFLIQPQLEHY 257
+ M +P S +L C+ G ++ F+ MQ L+ L
Sbjct: 135 LIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTAL--- 191
Query: 258 GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
VD+ + + A ++ M V+ +V W A++S C + E+
Sbjct: 192 ---VDMYLKFDDHAAAFHVFDQMEVKNEVS-WTAMISGCVANQNYEMG 235
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 175/342 (51%), Gaps = 15/342 (4%)
Query: 22 PSLVAALISTYARCHQPHIAHHVF--SRVMDTFSKNLVIESLMKAGECDIARKVFDKMPV 79
PSL+ S +A C + ++ H + +++ +S+ + I S A VF+ +
Sbjct: 220 PSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIAS---------ACSVFNSISE 270
Query: 80 RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWV 139
D+V ++LI GY + + L LF + + +PD A V+ CA L + K V
Sbjct: 271 PDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEV 330
Query: 140 HGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLA 199
H ++ ++L+ + +AL+DMY+KCG + + +F + ++ +N++I GL +HG A
Sbjct: 331 HSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFA 390
Query: 200 LDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGT 259
A F+ + ++PD ITF +L C H GL+N+G+E F M++ F I+PQ EHY
Sbjct: 391 STAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVY 450
Query: 260 MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISR----L 315
MV L+G AG LEEA + ++ D I ALLS C +H LAE NI +
Sbjct: 451 MVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEER 510
Query: 316 ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWI 357
S V+LSN+Y W ER+R+ + K G SW
Sbjct: 511 RSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISWF 552
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 110/230 (47%), Gaps = 10/230 (4%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
ARK+FD P R V WN++I Y K +F L LF +L ++ PD FT+A + G +
Sbjct: 59 ARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSE 118
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 189
+ +HG+ + + + I +A+V Y+K G I + ++F ++ +++WN M
Sbjct: 119 SFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVM 178
Query: 190 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 249
I G G I +F+ M+ P+ T V + GL++ + F
Sbjct: 179 ILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTS-----GLIDPSLLLVAWSVHAFC 233
Query: 250 IQPQLEHYG----TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
++ L+ + +V++ R + AC++ ++ EPD+V +L++
Sbjct: 234 LKINLDSHSYVGCALVNMYSRCMCIASACSVFNSIS-EPDLVACSSLITG 282
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 134/285 (47%), Gaps = 9/285 (3%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
D + ++++ KAG A K+F +P D+ WN +I GY + G+ LF M
Sbjct: 139 FDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLM 198
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
+P+ +T ++ +G L A VH L+ + + + ALV+MY++C I
Sbjct: 199 QHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCI 258
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
+ VF++++ + +++I G + G +A+ +F+ + + PD + +L +C
Sbjct: 259 ASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSC 318
Query: 229 SHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 287
+ G+E H ++ R ++ ++ ++D+ + G L+ A ++ +P E ++V
Sbjct: 319 AELSDSVSGKEVHSYVI--RLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKNIV 375
Query: 288 IWRALLSACRIHGKKELAEFAIANISRLESG---DFVLLSNMYCS 329
+ +L+ +HG A I LE G D + S + C+
Sbjct: 376 SFNSLILGLGLHGFASTAFEKFTEI--LEMGLIPDEITFSALLCT 418
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 168/317 (52%), Gaps = 7/317 (2%)
Query: 47 RVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR 106
R +DT +N +I + + + A KVF + ++ +WN +I +N + +LFR
Sbjct: 612 RELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFR 671
Query: 107 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 166
+ ++EP+ TF +++ +LG+ H ++ + + N +SAALVDMY+ CG
Sbjct: 672 NL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCG 728
Query: 167 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL-PDSITFVGIL 225
++ +VF + +S WN++I+ HG+ A+ +F + + + P+ +F+ +L
Sbjct: 729 MLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLL 788
Query: 226 KACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 285
ACSH G ++EG ++ M+ +F ++P EH +VD+LGRAG L EA I +
Sbjct: 789 SACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQK 848
Query: 286 VVIWRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNM 342
+W ALLSAC HG +L + + +E + ++ L+N Y L W A R+R M
Sbjct: 849 AGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKM 908
Query: 343 MKIGGVRKKRGKSWIEL 359
++ ++K G S I++
Sbjct: 909 VEDNALKKLPGYSVIDV 925
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 121/243 (49%), Gaps = 11/243 (4%)
Query: 62 MKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 121
+ + EC VF M RD+V+WNT++ + N L+ F+ M + E D TF+
Sbjct: 239 LSSAEC-----VFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFS 293
Query: 122 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSA--ALVDMYAKCGRIDVSKQVFDT-V 178
V++ C+ + L + +HGL+++ +S +++ MY+KCG + ++ VF+ V
Sbjct: 294 CVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELV 353
Query: 179 ARDHVSVWNAMINGLAVHGLALDAIAVFSRME-VENVLPDSITFVGILKACSHCGLVNEG 237
RD +S NA++NG A +G+ +A + ++M+ V+ + PD T V I C EG
Sbjct: 354 CRDVISS-NAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREG 412
Query: 238 REHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACR 297
R + LE +++D+ G+ G L ++ D+V W +++SA
Sbjct: 413 RAVHGYTVRMEMQSRALEVINSVIDMYGKCG-LTTQAELLFKTTTHRDLVSWNSMISAFS 471
Query: 298 IHG 300
+G
Sbjct: 472 QNG 474
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 9/248 (3%)
Query: 61 LMKAGECDIARKVFDKMP-VRDVVTWNTLIGGYVKNVRFLDGLRLFRGML-SAEVEPDGF 118
L K G+ A + M RD+ +WN++I G + L+ LR F+ M ++ D
Sbjct: 523 LQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLI 582
Query: 119 TFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV 178
T ++ LG + + HGL ++ +L+ L L+ MY +C I+ + +VF +
Sbjct: 583 TLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLI 642
Query: 179 ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR 238
+ ++ WN +I+ L+ + + +F +++E P+ ITFVG+L A + G + G
Sbjct: 643 SDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGM 699
Query: 239 E-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACR 297
+ H ++++ F P + +VD+ G LE + + V + W +++SA
Sbjct: 700 QAHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMKVFRNSGVN-SISAWNSVISAHG 756
Query: 298 IHGKKELA 305
HG E A
Sbjct: 757 FHGMGEKA 764
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 106/250 (42%), Gaps = 24/250 (9%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-V 113
N +I K G+ + A VF+++ RDV++ N ++ G+ N F + + M S + +
Sbjct: 330 NSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKI 389
Query: 114 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYI-LSAALVDMYAKCGRIDVSK 172
+PD T S+ + C L + VHG + ++ + + +++DMY KCG ++
Sbjct: 390 QPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAE 449
Query: 173 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLP--DSITFVGILKACSH 230
+F T + WN+MI+ + +G A +F + E T + IL +C
Sbjct: 450 LLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDS 509
Query: 231 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 290
+ G+ +Q + G+L A ++ M D+ W
Sbjct: 510 SDSLIFGKSVHCWLQ--------------------KLGDLTSAFLRLETMSETRDLTSWN 549
Query: 291 ALLSACRIHG 300
+++S C G
Sbjct: 550 SVISGCASSG 559
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 114/250 (45%), Gaps = 3/250 (1%)
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
+ GE + +FD++ +DV+ WN++I +N R++ + LF M+ E D T
Sbjct: 134 RTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLL 193
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 182
+ + L +H L +E + + L AL+++YAK + ++ VF +
Sbjct: 194 AASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRD 253
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HF 241
+ WN ++ +G ++ F M D++TF ++ ACS + G H
Sbjct: 254 IVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHG 313
Query: 242 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
++++ + + + +++ + + G+ E A + + + V DV+ A+L+ +G
Sbjct: 314 LVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL-VCRDVISSNAILNGFAANGM 372
Query: 302 KELAEFAIAN 311
E A F I N
Sbjct: 373 FEEA-FGILN 381
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 182/365 (49%), Gaps = 17/365 (4%)
Query: 2 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM------DTFSKN 55
D+ A + + +HG + ++ T A C V+ +++ + +
Sbjct: 482 DANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAH 541
Query: 56 LVIESLMKAGECDIARKVFDKMPV-RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
+I K A +FDK + V+WN ++ GY+ + + + + FR M + +
Sbjct: 542 ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQ 601
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
P+ TF ++V A L AL VH +++ + +LVDMYAKCG I+ S++
Sbjct: 602 PNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKC 661
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
F ++ ++ WN M++ A HGLA A+++F M+ + PDS++F+ +L AC H GLV
Sbjct: 662 FIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLV 721
Query: 235 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 294
EG+ F M R I+ ++EHY MVDLLG+AG EA M++ M V+ V +W ALL+
Sbjct: 722 EEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLN 781
Query: 295 ACRIHGKKELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGK 354
+ R+H L+ A+ + +LE + ++ R+ + + ++K
Sbjct: 782 SSRMHCNLWLSNAALCQLVKLEP----------LNPSHYSQDRRLGEVNNVSRIKKVPAC 831
Query: 355 SWIEL 359
SWIE+
Sbjct: 832 SWIEV 836
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 128/259 (49%), Gaps = 6/259 (2%)
Query: 63 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
K GE +IA ++F + RDVV+W+ +I Y + + + + LFR M+ ++P+ T S
Sbjct: 347 KCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTS 406
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 182
V+ GCA + A K +H ++ ++ + A++ MYAKCGR + + F+ +
Sbjct: 407 VLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKD 466
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF- 241
+NA+ G G A A V+ M++ V PDS T VG+L+ C+ C G +
Sbjct: 467 AVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYG 526
Query: 242 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
I+++ F + + H ++++ + L A + E V W +++ +HG+
Sbjct: 527 QIIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQ 584
Query: 302 KELAEFAIANISRLESGDF 320
AE A+A +++ F
Sbjct: 585 ---AEEAVATFRQMKVEKF 600
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 126/256 (49%), Gaps = 4/256 (1%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D + ++E KA + AR+VFDKM V+DVVTWNT++ G +N L LF M
Sbjct: 134 DVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMR 193
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
S V+ D + +++ ++L + +HGL+++K + S+ L+DMY C +
Sbjct: 194 SCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKK--GFIFAFSSGLIDMYCNCADLY 251
Query: 170 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
++ VF+ V R S W M+ A +G + + +F M +V + + L+A +
Sbjct: 252 AAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAA 311
Query: 230 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 289
+ G + +G + + LI + +++ + + G LE A + + + DVV W
Sbjct: 312 YVGDLVKGIAIHDYAVQQGLI-GDVSVATSLMSMYSKCGELEIAEQLFINIE-DRDVVSW 369
Query: 290 RALLSACRIHGKKELA 305
A++++ G+ + A
Sbjct: 370 SAMIASYEQAGQHDEA 385
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 3/164 (1%)
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE--VEPDGFTFASVVT 125
D++R +FD + VV WN++I GY + + L F G +S E ++PD ++F +
Sbjct: 50 DLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFF-GYMSEEKGIDPDKYSFTFALK 108
Query: 126 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 185
CA +H L+ E ++ + + ALV+MY K + ++QVFD + V
Sbjct: 109 ACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVT 168
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
WN M++GLA +G + A+ +F M V D ++ ++ A S
Sbjct: 169 WNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVS 212
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 110/223 (49%), Gaps = 2/223 (0%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
A VF+++ +D +W T++ Y N F + L LF M + +V + AS + A
Sbjct: 253 AESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAY 312
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 189
+G L +H +++ + + ++ +L+ MY+KCG +++++Q+F + V W+AM
Sbjct: 313 VGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAM 372
Query: 190 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 249
I G +AI++F M ++ P+++T +L+ C+ G+ + +
Sbjct: 373 IASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKS-IHCYAIKAD 431
Query: 250 IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 292
I+ +LE ++ + + G A + +P++ D V + AL
Sbjct: 432 IESELETATAVISMYAKCGRFSPALKAFERLPIK-DAVAFNAL 473
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 158 LVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM-EVENVLP 216
L++ Y+ R D+S+ +FD+V V +WN+MI G GL +A+ F M E + + P
Sbjct: 39 LINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDP 98
Query: 217 DSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM 276
D +F LKAC+ +G +++ L + + +V++ +A +L A +
Sbjct: 99 DKYSFTFALKACAGSMDFKKGLRIHDLIAEMGL-ESDVYIGTALVEMYCKARDLVSARQV 157
Query: 277 IKAMPVEPDVVIWRALLSACRIHG 300
M V+ DVV W ++S +G
Sbjct: 158 FDKMHVK-DVVTWNTMVSGLAQNG 180
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 178/321 (55%), Gaps = 17/321 (5%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
DT + N +I++ +K+G+ + A +V MP + +WNT++ GYV + + + F M
Sbjct: 253 DTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMH 312
Query: 110 SAEVEPDGFTFA-----SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK 164
S+ V D ++ + G+L +A H L L+ RV ++++AL+DMY+K
Sbjct: 313 SSGVRFDEYSLSIVLAAVAALAVVPWGSLIHAC-AHKLGLDSRV----VVASALIDMYSK 367
Query: 165 CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL-PDSITFVG 223
CG + ++ +F T+ R ++ VWN MI+G A +G +++AI +F++++ E L PD TF+
Sbjct: 368 CGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLN 427
Query: 224 ILKACSHCGLVNEGR-EHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV 282
+L CSHC + E +F +M N + I+P +EH +++ +G+ G + +A +I+
Sbjct: 428 LLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGF 487
Query: 283 EPDVVIWRALLSACRIHGKKELAEFAIANISRLESGD-----FVLLSNMYCSLKNWHNAE 337
D V WRALL AC + A+ A + L D ++++SN+Y + W
Sbjct: 488 GYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVG 547
Query: 338 RVRNMMKIGGVRKKRGKSWIE 358
++R +M+ GV K+ G SWI+
Sbjct: 548 QIRKIMRESGVLKEVGSSWID 568
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 126/268 (47%), Gaps = 54/268 (20%)
Query: 35 CHQPH--IAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGY 92
C Q H + H F V +T N ++ + + A KVFD+MP DV++WN+L+ GY
Sbjct: 74 CRQLHGYVTKHGF--VSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGY 131
Query: 93 VKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR-----LGALCNAKWVHGLMLEKR 147
V++ RF +G+ LF + ++V P+ F+F + + CAR LGA ++K V L LEK
Sbjct: 132 VQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVK-LGLEKG 190
Query: 148 VKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFS 207
N ++ L+DMY KCG +D DA+ VF
Sbjct: 191 ---NVVVGNCLIDMYGKCGFMD-------------------------------DAVLVFQ 216
Query: 208 RMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRA 267
ME + D++++ I+ +CS G + G F+ M N P Y ++D ++
Sbjct: 217 HMEEK----DTVSWNAIVASCSRNGKLELGLWFFHQMPN-----PDTVTYNELIDAFVKS 267
Query: 268 GNLEEACNMIKAMPVEPDVVIWRALLSA 295
G+ A ++ MP P+ W +L+
Sbjct: 268 GDFNNAFQVLSDMP-NPNSSSWNTILTG 294
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 111/255 (43%), Gaps = 30/255 (11%)
Query: 107 GMLSAEVE-------PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALV 159
G+L A VE PD ++ G + + +HG + + N LS +L+
Sbjct: 38 GVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLM 97
Query: 160 DMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSI 219
Y ++ + +VFD + V WN++++G G + I +F + +V P+
Sbjct: 98 RFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEF 157
Query: 220 TFVGILKACS-----------HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAG 268
+F L AC+ H LV G E N++ LI D+ G+ G
Sbjct: 158 SFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLI-----------DMYGKCG 206
Query: 269 NLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGDFVLLSNMYC 328
+++A + + M E D V W A++++C +GK EL + + ++ + L + +
Sbjct: 207 FMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFV 265
Query: 329 SLKNWHNAERVRNMM 343
+++NA +V + M
Sbjct: 266 KSGDFNNAFQVLSDM 280
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 167/312 (53%), Gaps = 8/312 (2%)
Query: 45 FSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRL 104
FS +D +N +I + + A VF ++ + TWN++I G+ N R + L
Sbjct: 352 FSHDIDNV-RNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFL 410
Query: 105 FRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKR-VKLNYILSAALVDMYA 163
+ ML + P+ T AS++ AR+G L + K H +L ++ K IL +LVDMYA
Sbjct: 411 LKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYA 470
Query: 164 KCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVG 223
K G I +K+VFD++ + + ++I+G G A+A F M+ + PD +T V
Sbjct: 471 KSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVA 530
Query: 224 ILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE 283
+L ACSH LV EG F M++ F I+ +LEHY MVDL RAG L++A ++ +P E
Sbjct: 531 VLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYE 590
Query: 284 PDVVIWRALLSACRIHGKKELAEFAIANISRLES-----GDFVLLSNMYCSLKNWHNAER 338
P + LL AC IHG + E+A A+ LE+ G ++LL++MY +W
Sbjct: 591 PSSAMCATLLKACLIHGNTNIGEWA-ADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVT 649
Query: 339 VRNMMKIGGVRK 350
V+ ++ GV+K
Sbjct: 650 VKTLLSDLGVQK 661
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
D A+ + + + + WN LIG Y++N RF + + +++ M+S + D FT+ SV+ C
Sbjct: 135 DEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKAC 194
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVW 186
A L + VHG + + N + AL+ MY + G++DV++++FD ++ RD VS W
Sbjct: 195 AALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVS-W 253
Query: 187 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 232
NA+IN +A + RM + V +T+ I C G
Sbjct: 254 NAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 144/326 (44%), Gaps = 42/326 (12%)
Query: 20 TYPSLV---AALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDK 76
TYPS++ AAL+ +A H + V S + + N +I + G+ D+AR++FD+
Sbjct: 186 TYPSVIKACAALLD-FAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDR 244
Query: 77 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR----LGA 132
M RD V+WN +I Y + + +L M + VE T+ ++ GC +GA
Sbjct: 245 MSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGA 304
Query: 133 L--------CNA--------------------KW---VHGLMLEKRVKLNYI--LSAALV 159
L CN KW H L++ + I + +L+
Sbjct: 305 LNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLI 364
Query: 160 DMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSI 219
MY++C + + VF V + +S WN++I+G A + + + + M + P+ I
Sbjct: 365 TMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHI 424
Query: 220 TFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKA 279
T IL + G + G+E + R + L + ++VD+ ++G + A + +
Sbjct: 425 TLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDS 484
Query: 280 MPVEPDVVIWRALLSACRIHGKKELA 305
M + D V + +L+ GK E+A
Sbjct: 485 MR-KRDKVTYTSLIDGYGRLGKGEVA 509
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 167/312 (53%), Gaps = 8/312 (2%)
Query: 45 FSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRL 104
FS +D +N +I + + A VF ++ + TWN++I G+ N R + L
Sbjct: 352 FSHDIDNV-RNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFL 410
Query: 105 FRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKR-VKLNYILSAALVDMYA 163
+ ML + P+ T AS++ AR+G L + K H +L ++ K IL +LVDMYA
Sbjct: 411 LKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYA 470
Query: 164 KCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVG 223
K G I +K+VFD++ + + ++I+G G A+A F M+ + PD +T V
Sbjct: 471 KSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVA 530
Query: 224 ILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE 283
+L ACSH LV EG F M++ F I+ +LEHY MVDL RAG L++A ++ +P E
Sbjct: 531 VLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYE 590
Query: 284 PDVVIWRALLSACRIHGKKELAEFAIANISRLES-----GDFVLLSNMYCSLKNWHNAER 338
P + LL AC IHG + E+A A+ LE+ G ++LL++MY +W
Sbjct: 591 PSSAMCATLLKACLIHGNTNIGEWA-ADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVT 649
Query: 339 VRNMMKIGGVRK 350
V+ ++ GV+K
Sbjct: 650 VKTLLSDLGVQK 661
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
D A+ + + + + WN LIG Y++N RF + + +++ M+S + D FT+ SV+ C
Sbjct: 135 DEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKAC 194
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVW 186
A L + VHG + + N + AL+ MY + G++DV++++FD ++ RD VS W
Sbjct: 195 AALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVS-W 253
Query: 187 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 232
NA+IN +A + RM + V +T+ I C G
Sbjct: 254 NAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 144/326 (44%), Gaps = 42/326 (12%)
Query: 20 TYPSLV---AALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDK 76
TYPS++ AAL+ +A H + V S + + N +I + G+ D+AR++FD+
Sbjct: 186 TYPSVIKACAALLD-FAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDR 244
Query: 77 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR----LGA 132
M RD V+WN +I Y + + +L M + VE T+ ++ GC +GA
Sbjct: 245 MSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGA 304
Query: 133 L--------CNA--------------------KW---VHGLMLEKRVKLNYI--LSAALV 159
L CN KW H L++ + I + +L+
Sbjct: 305 LNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLI 364
Query: 160 DMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSI 219
MY++C + + VF V + +S WN++I+G A + + + + M + P+ I
Sbjct: 365 TMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHI 424
Query: 220 TFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKA 279
T IL + G + G+E + R + L + ++VD+ ++G + A + +
Sbjct: 425 TLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDS 484
Query: 280 MPVEPDVVIWRALLSACRIHGKKELA 305
M + D V + +L+ GK E+A
Sbjct: 485 MR-KRDKVTYTSLIDGYGRLGKGEVA 509
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 175/394 (44%), Gaps = 67/394 (17%)
Query: 6 AAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAG 65
A+ H ++ GYATY + AL+ YA K G
Sbjct: 348 ASSAHCLIVKTGYATYKLVNNALVDMYA-----------------------------KRG 378
Query: 66 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 125
D A KVF+ M +DV++W L+ G N + + L+LF M + PD ASV++
Sbjct: 379 IMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLS 438
Query: 126 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 185
A L L + VHG ++ + ++ +LV MY KCG ++ + +F+++ +
Sbjct: 439 ASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLIT 498
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 245
W +I G A +GL DA + +F+ M+
Sbjct: 499 WTCLIVGYAKNGLLEDA-----------------------------------QRYFDSMR 523
Query: 246 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
+ I P EHY M+DL GR+G+ + ++ M VEPD +W+A+L+A R HG E
Sbjct: 524 TVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENG 583
Query: 306 EFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDS 362
E A + LE + +V LSNMY + A VR +MK + K+ G SW+E
Sbjct: 584 ERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGK 643
Query: 363 IHQFNAADQSHAEMKAIHRVLEGLIQRAKFDGCF 396
+H F + D+ H M I+ ++ ++ K G F
Sbjct: 644 VHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYF 677
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 156/321 (48%), Gaps = 10/321 (3%)
Query: 15 VHGYATYPSLVAALI-STYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGECDIAR 71
+H YA L + L+ ++ + A +F ++ D F+ N +I + + A
Sbjct: 20 IHSYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAE 79
Query: 72 KVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLG 131
K+F PV++ ++WN LI GY K+ ++ LF M S ++P+ +T SV+ C L
Sbjct: 80 KLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLV 139
Query: 132 ALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV-WNAMI 190
L + +HG ++ L+ + L+ MYA+C RI ++ +F+T+ + +V W +M+
Sbjct: 140 LLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSML 199
Query: 191 NGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFL 249
G + +G A AI F + E + TF +L AC+ G + H I+++ F
Sbjct: 200 TGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFK 259
Query: 250 IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG--KKELAEF 307
++ ++D+ + +E A +++ M V+ DVV W +++ C G + L+ F
Sbjct: 260 TNIYVQ--SALIDMYAKCREMESARALLEGMEVD-DVVSWNSMIVGCVRQGLIGEALSMF 316
Query: 308 AIANISRLESGDFVLLSNMYC 328
+ ++ DF + S + C
Sbjct: 317 GRMHERDMKIDDFTIPSILNC 337
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 138/310 (44%), Gaps = 53/310 (17%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 67
+ H I G+ ++V L++ YA+C + A ++F + GE
Sbjct: 146 QIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETM---------------EGE- 189
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
++ VTW +++ GY +N + FR + + + +TF SV+T C
Sbjct: 190 ------------KNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTAC 237
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 187
A + A VH +++ K N + +AL+DMYAKC ++ ++ + + + D V WN
Sbjct: 238 ASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWN 297
Query: 188 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK------------ACSHCGLVN 235
+MI G GL +A+++F RM ++ D T IL + +HC +V
Sbjct: 298 SMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVK 357
Query: 236 EGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
G + ++ N +VD+ + G ++ A + + M +E DV+ W AL++
Sbjct: 358 TGYATYKLVNN------------ALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTG 404
Query: 296 CRIHGKKELA 305
+G + A
Sbjct: 405 NTHNGSYDEA 414
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 180/344 (52%), Gaps = 11/344 (3%)
Query: 57 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 116
+I++ D A V D M +DVV+ +T+I G R + + +F M P+
Sbjct: 369 LIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PN 425
Query: 117 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYI-LSAALVDMYAKCGRIDVSKQVF 175
T S++ C+ L +KW HG+ + + + +N I + ++VD YAKCG I+++++ F
Sbjct: 426 AITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTF 485
Query: 176 DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVN 235
D + ++ W +I+ A++GL A+A+F M+ + P+++T++ L AC+H GLV
Sbjct: 486 DQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVK 545
Query: 236 EGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP--VEPDVVIWRALL 293
+G F M +P L+HY +VD+L RAG ++ A +IK +P V+ W A+L
Sbjct: 546 KGLMIFKSMVEEDH-KPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAIL 604
Query: 294 SACRIHGKKE-LAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVR 349
S CR KK + +A + LE S ++L S+ + + K+W + +R ++K VR
Sbjct: 605 SGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVR 664
Query: 350 KKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFD 393
G S + G+ +F A D+ ++ V++ L + K D
Sbjct: 665 VVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSLHRCMKLD 708
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 130/260 (50%), Gaps = 6/260 (2%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D F N +I+ K + D A +VFD+ R++V+WN+++ G+V N R+ + L +F M+
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMV 320
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
VE D T S++ C K +HG+++ + + N + ++L+D Y C +D
Sbjct: 321 QEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVD 380
Query: 170 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
+ V D++ V + MI+GLA G + +AI++F M P++IT + +L ACS
Sbjct: 381 DAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACS 437
Query: 230 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 289
+ + I R L + ++VD + G +E A + E +++ W
Sbjct: 438 VSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQI-TEKNIISW 496
Query: 290 RALLSACRIHG--KKELAEF 307
++SA I+G K LA F
Sbjct: 497 TVIISAYAINGLPDKALALF 516
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 44/277 (15%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML-SAEVEPDGFTFASVVTGCA 128
ARK+FD+M RDV++W+ +I YV++ + GL+LF+ M+ A+ EPD T SV+ C
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
Query: 129 RLGALCNAKWVHGLMLEKRVKL-NYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 187
+ + + VHG + + L + + +L+DMY+K +D + +VFD ++ WN
Sbjct: 238 VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWN 297
Query: 188 AMINGLAVHGLALD-AIAVFSRMEVENVLPDSITFVGILKAC------------------ 228
+++ G VH D A+ +F M E V D +T V +L+ C
Sbjct: 298 SILAGF-VHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIR 356
Query: 229 -----------------SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLE 271
+ C LV++ + M + ++ TM+ L AG +
Sbjct: 357 RGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCS-----TMISGLAHAGRSD 411
Query: 272 EACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFA 308
EA ++ M P+ + +LL+AC + +++A
Sbjct: 412 EAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWA 448
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 104/245 (42%), Gaps = 5/245 (2%)
Query: 52 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 111
F N + + MK G+ + FD M RD V+WN ++ G + +GL F +
Sbjct: 62 FQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVW 121
Query: 112 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
EP+ T V+ C L + + +HG ++ + +++ MYA + +
Sbjct: 122 GFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-A 178
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKACSH 230
+++FD ++ V W+ +I + + +F M E PD +T +LKAC+
Sbjct: 179 RKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTV 238
Query: 231 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 290
++ GR R + +++D+ + +++ A + ++V W
Sbjct: 239 MEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCR-NIVSWN 297
Query: 291 ALLSA 295
++L+
Sbjct: 298 SILAG 302
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 169/326 (51%), Gaps = 8/326 (2%)
Query: 70 ARKVFDKMP--VRDVVTWNTLIGGYVKNVRFLDGLRLF-RGMLSAEVEPDGFTFASVVTG 126
A ++FD+ P + ++IGGY +N + LF R + ++ D + ++
Sbjct: 471 AEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAV 530
Query: 127 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 186
C LG +H L+ + L +L+ MYAKC D + ++F+T+ V W
Sbjct: 531 CGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISW 590
Query: 187 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA--CSHCGLVNEGREHFNIM 244
N++I+ + +A+A++SRM + + PD IT ++ A + ++ R+ F M
Sbjct: 591 NSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSM 650
Query: 245 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKEL 304
+ + I+P EHY V +LG G LEEA + I +MPV+P+V + RALL +CRIH +
Sbjct: 651 KTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSV 710
Query: 305 AEFA---IANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGD 361
A+ I + +++L SN+Y + WH +E +R M+ G RK KSWI +
Sbjct: 711 AKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHEN 770
Query: 362 SIHQFNAADQSHAEMKAIHRVLEGLI 387
IH F+A D SH + K I+R LE LI
Sbjct: 771 KIHSFHARDTSHPQEKDIYRGLEILI 796
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 142/311 (45%), Gaps = 13/311 (4%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGEC 67
H + I G S+ ALI Y++ ++ +M D + +I + M G
Sbjct: 308 HGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMV 367
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
D A ++F + ++ +T+N L+ G+ +N L L+LF ML VE F+ S V C
Sbjct: 368 DSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC 427
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR--DHVSV 185
+ ++ +HG ++ N + AL+DM +C R+ ++++FD D
Sbjct: 428 GLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKA 487
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVL-PDSITFVGILKACSHCGLVNEGRE-HFNI 243
++I G A +GL A+++F R E L D ++ IL C G G + H
Sbjct: 488 TTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYA 547
Query: 244 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRI---HG 300
++ + L + +++ + + + ++A + M E DV+ W +L+S C I +G
Sbjct: 548 LKAGYFSDISLGN--SLISMYAKCCDSDDAIKIFNTMR-EHDVISWNSLIS-CYILQRNG 603
Query: 301 KKELAEFAIAN 311
+ LA ++ N
Sbjct: 604 DEALALWSRMN 614
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 4/189 (2%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-V 113
N +I + +K G A VF + VV++ LI G+ + ++ L++F M A V
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 114 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK--CGRIDVS 171
+P+ +TF +++T C R+ +HGL+++ + +S +L+ +Y K D
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM-EVENVLPDSITFVGILKACSH 230
++FD + + V+ WN +++ L G + A +F M VE DS T +L +C+
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 231 CGLVNEGRE 239
++ GRE
Sbjct: 298 SSVLLRGRE 306
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 35/207 (16%)
Query: 64 AGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-VEPDGFTFAS 122
CD K+FD++P RDV +WNT++ VK + LF M E D FT ++
Sbjct: 231 GSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLST 290
Query: 123 VVTGCARLGALCNAKWVH------GLMLE-----------------KRVKLNYILSAA-- 157
+++ C L + +H GLM E K+V+ Y + A
Sbjct: 291 LLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQD 350
Query: 158 ------LVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEV 211
++ Y G +D + ++F V + +NA++ G +G L A+ +F+ M
Sbjct: 351 AVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQ 410
Query: 212 ENVLPDSITFVGILKACSHCGLVNEGR 238
V +T + A CGLV+E +
Sbjct: 411 RGV---ELTDFSLTSAVDACGLVSEKK 434
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 185/354 (52%), Gaps = 15/354 (4%)
Query: 52 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 111
F ++ K E + A+KVFD M RDVV W +I G+ + ++ F M
Sbjct: 438 FVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYRE 497
Query: 112 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS--AALVDMYAKCGRID 169
+ DGF+ +SV+ C+ + L + H L + R + ++S ALVDMY K G+ +
Sbjct: 498 KNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAI--RTGFDCVMSVCGALVDMYGKNGKYE 555
Query: 170 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
++ +F + + WN+M+ + HG+ A++ F ++ +PD++T++ +L ACS
Sbjct: 556 TAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACS 615
Query: 230 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMI-KAMPVEPDVVI 288
H G +G+ +N M+ + I+ +HY MV+L+ +AG ++EA +I ++ P +
Sbjct: 616 HRGSTLQGKFLWNQMKEQG-IKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAEL 674
Query: 289 WRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKI 345
WR LLSAC ++ +A I +L+ D +LLSN+Y W + +R ++
Sbjct: 675 WRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRG 734
Query: 346 GGVRKKRGKSWIELGDSIHQ-FNAADQSHAEMKA-----IHRVLEGLIQRAKFD 393
K G SWIE+ ++ Q F++ DQS+ E+ + ++R+ ++ ++ F+
Sbjct: 735 LASSKDPGLSWIEVNNNNTQVFSSGDQSNPEVVSQAQDELNRLKRNMLCKSSFN 788
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 130/269 (48%), Gaps = 26/269 (9%)
Query: 52 FSKNLVIESLM-----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR 106
+S N+V+++ + G+ + AR++FD + RD V WNT+I G +KN + DGL FR
Sbjct: 230 YSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFR 289
Query: 107 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 166
ML + V+P FT++ V+ GC++LG+ K +H ++ + L AL+DMY CG
Sbjct: 290 NMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCG 349
Query: 167 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSR-MEVENVLPDSITFVGIL 225
+ + VF + ++ WN++I+G + +G A+ ++ R + + PD TF +
Sbjct: 350 DMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAI 409
Query: 226 KACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG---------TMVDLLGRAGNLEEACNM 276
A + G+ L+ Q+ G T++ + + E A +
Sbjct: 410 SATAEPERFVHGK----------LLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKV 459
Query: 277 IKAMPVEPDVVIWRALLSACRIHGKKELA 305
M E DVV+W ++ G ELA
Sbjct: 460 FDVMK-ERDVVLWTEMIVGHSRLGNSELA 487
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 130/268 (48%), Gaps = 5/268 (1%)
Query: 52 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLD-GLRLFRGMLS 110
++ N +I ++ G + ARKVFDKMP R+VV++N L Y +N F L M
Sbjct: 133 YANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAF 192
Query: 111 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 170
V+P+ TF S+V CA L + ++ +++ N ++ +++ MY+ CG ++
Sbjct: 193 EYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLES 252
Query: 171 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 230
++++FD V WN MI G + D + F M + V P T+ +L CS
Sbjct: 253 ARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSK 312
Query: 231 CGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 289
G + G+ H I+ + L L++ ++D+ G++ EA + + P++V W
Sbjct: 313 LGSYSLGKLIHARIIVSDSLADLPLDN--ALLDMYCSCGDMREAFYVFGRIH-NPNLVSW 369
Query: 290 RALLSACRIHGKKELAEFAIANISRLES 317
+++S C +G E A + R+ +
Sbjct: 370 NSIISGCSENGFGEQAMLMYRRLLRMST 397
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 126/297 (42%), Gaps = 32/297 (10%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDI 69
HA++IV L AL+ Y C A +VF R+ +
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNP------------------ 364
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV-EPDGFTFASVVTGCA 128
++V+WN++I G +N + ++R +L PD +TF++ ++ A
Sbjct: 365 -----------NLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATA 413
Query: 129 RLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNA 188
+ K +HG + + + + + L+ MY K + +++VFD + V +W
Sbjct: 414 EPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTE 473
Query: 189 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 248
MI G + G + A+ F M E D + ++ ACS ++ +G E F+ + R
Sbjct: 474 MIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG-EVFHCLAIRT 532
Query: 249 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
+ G +VD+ G+ G E A I ++ PD+ W ++L A HG E A
Sbjct: 533 GFDCVMSVCGALVDMYGKNGKYETA-ETIFSLASNPDLKCWNSMLGAYSQHGMVEKA 588
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 133/337 (39%), Gaps = 57/337 (16%)
Query: 52 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTL--IGGYVKNVRFLDG----LRLF 105
++ N +I ++ + ARKVFDKMP R++VT L + YV L L F
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEK---RVKLNYILSAALVDMY 162
+ + + + + C + L A+ +H L+L + + L+ MY
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 163 AKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH-GLALDAIAVFSRMEVENVLPDSITF 221
+CG ++ +++VFD + +V +NA+ + + + A A + + M E V P+S TF
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 222 VGILKAC-----------------------------------SHCGLVNEGREHFNIMQN 246
+++ C S CG + R F+ + N
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262
Query: 247 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSACRIHGKKE 303
R + + TM+ + +E+ + M V+P + +L+ C G
Sbjct: 263 RDAVA-----WNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYS 317
Query: 304 LAEFAIANISRLES-GDFVL---LSNMYCSLKNWHNA 336
L + A I +S D L L +MYCS + A
Sbjct: 318 LGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREA 354
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 166/318 (52%), Gaps = 6/318 (1%)
Query: 58 IESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDG 117
I+ K D + K+F ++ D V N++IG Y + D LRLF ++ V PD
Sbjct: 277 IDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDK 336
Query: 118 FTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDT 177
FTF+SV++ + L + VH L+++ L+ ++ +L++MY K G +D++ VF
Sbjct: 337 FTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAK 395
Query: 178 VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL-PDSITFVGILKACSHCGLVNE 236
+ WN +I GLA + A++++A+F+++ + L PD +T +GIL AC + G VNE
Sbjct: 396 TDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNE 455
Query: 237 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 296
G + F+ M+ + P EHY +++LL R G + EA ++ +P EP IW +L A
Sbjct: 456 GIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCAS 515
Query: 297 RIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRG 353
G LAE + E S +++L +Y W N+ ++R M ++ +G
Sbjct: 516 LDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQG 575
Query: 354 KSWIELGDSIHQFNAADQ 371
S I + S+ F ADQ
Sbjct: 576 SSKISIESSVFSFE-ADQ 592
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 155/333 (46%), Gaps = 24/333 (7%)
Query: 4 TTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESL 61
T A HA+L+ G+ + Y + A +F + D T + N+ ++ L
Sbjct: 21 TLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGL 80
Query: 62 MKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTF- 120
K G + A +FD+MP RDVV+WNT+I G V G+R+F M E+ P FTF
Sbjct: 81 FKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFS 140
Query: 121 --ASVVTGCARLGALCNAKWVHGLMLEKRV-KLNYILSAALVDMYAKCGRIDVSKQVFDT 177
AS+VT C R G + +HG + V + N ++ +++DMY + G D + VF T
Sbjct: 141 ILASLVT-CVRHG-----EQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLT 194
Query: 178 VARDHVSVWNAMINGLAVHG---LALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
+ V WN +I + G +ALD + ME++ PD T ++ CS +
Sbjct: 195 MEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQ---PDEYTVSMVVSICSDLREL 251
Query: 235 NEGREHFNI-MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
++G++ + ++ FL + G +D+ + L+++ + + + + D V+ +++
Sbjct: 252 SKGKQALALCIKMGFLSNSIV--LGAGIDMFSKCNRLDDSVKLFRELE-KWDSVLCNSMI 308
Query: 294 SACRIH--GKKELAEFAIANISRLESGDFVLLS 324
+ H G+ L F +A + F S
Sbjct: 309 GSYSWHCCGEDALRLFILAMTQSVRPDKFTFSS 341
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 85/173 (49%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N V++ + G D A VF M RDVV+WN LI + L F M E++
Sbjct: 173 NSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQ 232
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
PD +T + VV+ C+ L L K L ++ N I+ A +DM++KC R+D S ++
Sbjct: 233 PDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKL 292
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
F + + + N+MI + H DA+ +F ++V PD TF +L +
Sbjct: 293 FRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS 345
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
+DT ++E K G D+A VF K +D++ WNT+I G +N R ++ L +F +
Sbjct: 368 LDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQL 427
Query: 109 L-SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLN-----YILSAALVDMY 162
L + ++PD T ++ C G + + M EK +N Y A ++++
Sbjct: 428 LMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSM-EKAHGVNPGNEHY---ACIIELL 483
Query: 163 AKCGRIDVSKQVFDTVARDHVS-VWNAMI 190
+ G I+ +K + D + + S +W ++
Sbjct: 484 CRVGMINEAKDIADKIPFEPSSHIWEPIL 512
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 149/307 (48%), Gaps = 29/307 (9%)
Query: 2 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESL 61
D + H + HGY T + AL+ Y +C A+ F ++ +
Sbjct: 410 DVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSE----------- 458
Query: 62 MKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 121
+RD V+WN L+ G + R L F GM E +P +T A
Sbjct: 459 -----------------LRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLA 500
Query: 122 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 181
+++ GCA + AL K +HG ++ K++ ++ A+VDMY+KC D + +VF A
Sbjct: 501 TLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATR 560
Query: 182 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 241
+ +WN++I G +G + + +F +E E V PD +TF+GIL+AC G V G ++F
Sbjct: 561 DLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYF 620
Query: 242 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
+ M ++ I PQ+EHY M++L + G L + + MP +P + + + AC+ +
Sbjct: 621 SSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRW 680
Query: 302 KELAEFA 308
+L +A
Sbjct: 681 SKLGAWA 687
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 153/307 (49%), Gaps = 19/307 (6%)
Query: 14 IVHGYATYPSLVA-ALIST-----YARCHQPHIAHHVF--SRVMDTFSKNLVIESLMKAG 65
++H A S+VA ++ST Y +C + A VF +R D S + +G
Sbjct: 284 VIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSG 343
Query: 66 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEP-DGFTFASVV 124
AR++FD MP R++V+WN ++GGYV + + L F ++ E+E D T ++
Sbjct: 344 LTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALD-FLTLMRQEIENIDNVTLVWIL 402
Query: 125 TGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA--RDH 182
C+ + + K HG + N I++ AL+DMY KCG + + F ++ RD
Sbjct: 403 NVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDE 462
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HF 241
VS WNA++ G+A G + A++ F M+VE P T +L C++ +N G+ H
Sbjct: 463 VS-WNALLTGVARVGRSEQALSFFEGMQVE-AKPSKYTLATLLAGCANIPALNLGKAIHG 520
Query: 242 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 301
++++ + I + G MVD+ + + A + K D+++W +++ C +G+
Sbjct: 521 FLIRDGYKIDVVIR--GAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRGCCRNGR 577
Query: 302 -KELAEF 307
KE+ E
Sbjct: 578 SKEVFEL 584
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 141/338 (41%), Gaps = 65/338 (19%)
Query: 1 MDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIES 60
+D + H ++ +GY+ L +++ Y +C RVM
Sbjct: 176 LDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKC-----------RVMSD--------- 215
Query: 61 LMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTF 120
AR+VFD++ V+WN ++ Y++ + + +F ML V P T
Sbjct: 216 ---------ARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTV 266
Query: 121 ASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR 180
+SV+ C+R AL K +H + ++ V + ++S ++ DMY KC R++ +++VFD
Sbjct: 267 SSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRS 326
Query: 181 DHVSVWNAMINGLAVHGLALDAIAVFS--------------------------------- 207
+ W + ++G A+ GL +A +F
Sbjct: 327 KDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLM 386
Query: 208 RMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRA 267
R E+EN+ D++T V IL CS V G++ + R + ++D+ G+
Sbjct: 387 RQEIENI--DNVTLVWILNVCSGISDVQMGKQAHGFIY-RHGYDTNVIVANALLDMYGKC 443
Query: 268 GNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
G L+ A + M D V W ALL+ G+ E A
Sbjct: 444 GTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQA 481
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 2/197 (1%)
Query: 33 ARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGY 92
AR Q H+ FS + F N IE+ K G D AR++F++MP RD +WN +I
Sbjct: 80 ARKVQSHLV--TFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITAC 137
Query: 93 VKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNY 152
+N + R+FR M V +FA V+ C + L + +H +++ N
Sbjct: 138 AQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNV 197
Query: 153 ILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE 212
L ++VD+Y KC + +++VFD + WN ++ G +A+ +F +M
Sbjct: 198 DLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLEL 257
Query: 213 NVLPDSITFVGILKACS 229
NV P + T ++ ACS
Sbjct: 258 NVRPLNHTVSSVMLACS 274
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 150/297 (50%), Gaps = 5/297 (1%)
Query: 4 TTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVF---SRVMDTFSKNLVIES 60
T + H+ ++ GY ++++L+ +YA+ + A + S N+V
Sbjct: 429 TELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGI 488
Query: 61 LMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTF 120
+ G+ + K+ + D V+WN I ++ + + LF+ ML + + PD +TF
Sbjct: 489 YSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTF 548
Query: 121 ASVVTGCARLGALCNAKWVHGLMLEKRVKL-NYILSAALVDMYAKCGRIDVSKQVFDTVA 179
S+++ C++L L +HGL+ + + + L+DMY KCG I +VF+
Sbjct: 549 VSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETR 608
Query: 180 RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE 239
++ W A+I+ L +HG +A+ F PD ++F+ IL AC H G+V EG
Sbjct: 609 EKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMG 668
Query: 240 HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 296
F M++ + ++P+++HY VDLL R G L+EA ++I+ MP D +WR L C
Sbjct: 669 LFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 29/269 (10%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N +I + K G +A ++F D+V+WN +I K+ L L+LF M
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
P+ T+ SV+ + + L + +HG++++ + +L AL+D YAKCG ++ S+
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLC 373
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS----- 229
FD + ++ WNA+++G A + +++F +M P TF LK+C
Sbjct: 374 FDYIRDKNIVCWNALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQ 432
Query: 230 --HCGLVNEGREHFN--------------IMQNRFLIQPQLEHYGTMVDL------LGRA 267
H +V G E + +M + L+ ++V L R
Sbjct: 433 QLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRR 492
Query: 268 GNLEEACNMIKAMPVEPDVVIWRALLSAC 296
G E+ +I + +PD V W ++AC
Sbjct: 493 GQYHESVKLISTLE-QPDTVSWNIAIAAC 520
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 115/285 (40%), Gaps = 42/285 (14%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDG---LRLFRGMLSA 111
N +I+ K G + +R FD + +++V WN L+ GY DG L LF ML
Sbjct: 355 NALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK----DGPICLSLFLQMLQM 410
Query: 112 EVEPDGFTFASVVTGCA------------RLGALCNAKWVHGLMLEKRVKLNYILSAALV 159
P +TF++ + C R+G N + LM + N +++ AL+
Sbjct: 411 GFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLM--RSYAKNQLMNDALL 468
Query: 160 ------------------DMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALD 201
+Y++ G+ S ++ T+ + WN I + +
Sbjct: 469 LLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEE 528
Query: 202 AIAVFSRMEVENVLPDSITFVGILKACSH-CGLVNEGREHFNIMQNRFLIQPQLEHYGTM 260
I +F M N+ PD TFV IL CS C L H I + F +
Sbjct: 529 VIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFV-CNVL 587
Query: 261 VDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
+D+ G+ G++ + + E +++ W AL+S IHG + A
Sbjct: 588 IDMYGKCGSIRSVMKVFEETR-EKNLITWTALISCLGIHGYGQEA 631
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 110/234 (47%), Gaps = 14/234 (5%)
Query: 68 DIARKVFDKMPVRDVVTWN---TLIG--GYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
++A +VF+ MP + + TWN +L+G G++K F FR ++ +F
Sbjct: 166 EMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFF-----FRELVRMGASLTESSFLG 220
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 182
V+ G + + L +K +H +K + + +L+ Y KCG +++++F
Sbjct: 221 VLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWD 280
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HF 241
+ WNA+I A L A+ +F M P+ T+V +L S L++ GR+ H
Sbjct: 281 IVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHG 340
Query: 242 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
+++N + + ++D + GNLE++ + + ++V W ALLS
Sbjct: 341 MLIKNG--CETGIVLGNALIDFYAKCGNLEDS-RLCFDYIRDKNIVCWNALLSG 391
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 111/253 (43%), Gaps = 27/253 (10%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N +I K GE +A KVFD+MP R+ V++NT+I GY K +F M
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKL-NYILSAALVDMYAKCGRIDVSKQ 173
P+ T + +++ CA L + +HGL L+ + + + + L+ +Y + +++++Q
Sbjct: 113 PNQSTVSGLLS-CASLDVRAGTQ-LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQ 170
Query: 174 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS---- 229
VF+ + + WN M++ L G + + F + +F+G+LK S
Sbjct: 171 VFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKD 230
Query: 230 -------HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV 282
HC +G + ++ +++ G+ GN A M +
Sbjct: 231 LDISKQLHCSATKKG------------LDCEISVVNSLISAYGKCGNTHMAERMFQDAG- 277
Query: 283 EPDVVIWRALLSA 295
D+V W A++ A
Sbjct: 278 SWDIVSWNAIICA 290
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 155/299 (51%), Gaps = 20/299 (6%)
Query: 70 ARKVFDKMPVR-DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCA 128
A KV++ + V D V N+LI G ++N + + +L + P+ +S + GC+
Sbjct: 238 AMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLAGCS 292
Query: 129 RLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNA 188
L K +H + L + L L+DMY KCG+I ++ +F + V W +
Sbjct: 293 DNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTS 352
Query: 189 MINGLAVHGLALDAIAVFSRM--EVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 246
MI+ AV+G + A+ +F M E VLP+S+TF+ ++ AC+H GLV EG+E F +M+
Sbjct: 353 MIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKE 412
Query: 247 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD-----VVIWRALLSACRIHGK 301
++ + P EHY +D+L +AG EE +++ M +E D IW A+LSAC ++
Sbjct: 413 KYRLVPGTEHYVCFIDILSKAGETEEIWRLVERM-MENDNQSIPCAIWVAVLSACSLNMD 471
Query: 302 KELAEFAIANISRLESGD-----FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKS 355
E+ + E+G +VL+SN Y ++ W E +R +K G+ K G S
Sbjct: 472 LTRGEYVARRLME-ETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 121/247 (48%), Gaps = 8/247 (3%)
Query: 53 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 112
S NLV+ + A +FD++P RD+ + N+ + ++++ D L LF + A
Sbjct: 20 STNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRAS 79
Query: 113 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 172
+ TF V+ C+ L + VH LM+++ + I AL+DMY+K G + S
Sbjct: 80 PDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSV 139
Query: 173 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 232
+VF++V + WNA+++G +G +A+ VF+ M E V T ++K C+
Sbjct: 140 RVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLK 199
Query: 233 LVNEGRE--HFNIMQNRFLIQPQLEHYGT-MVDLLGRAGNLEEACNMIKAMPVEPDVVIW 289
++ +G++ ++ R L+ GT M+ G + EA + ++ V D V+
Sbjct: 200 ILQQGKQVHAMVVVTGRDLVV-----LGTAMISFYSSVGLINEAMKVYNSLNVHTDEVML 254
Query: 290 RALLSAC 296
+L+S C
Sbjct: 255 NSLISGC 261
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 127/253 (50%), Gaps = 13/253 (5%)
Query: 51 TFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 110
T SK +I+ K G + +VF+ + +D+V+WN L+ G+++N + + L +F M
Sbjct: 119 TISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYR 178
Query: 111 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 170
VE FT +SVV CA L L K VH +++ L +L A++ Y+ G I+
Sbjct: 179 ERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINE 237
Query: 171 SKQVFDT--VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
+ +V+++ V D V + N++I+G + +A + SR P+ L C
Sbjct: 238 AMKVYNSLNVHTDEV-MLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGC 291
Query: 229 SHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 287
S + G++ H ++N F+ +L ++D+ G+ G + +A + +A+P VV
Sbjct: 292 SDNSDLWIGKQIHCVALRNGFVSDSKL--CNGLMDMYGKCGQIVQARTIFRAIP-SKSVV 348
Query: 288 IWRALLSACRIHG 300
W +++ A ++G
Sbjct: 349 SWTSMIDAYAVNG 361
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 48 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 107
V D+ N +++ K G+ AR +F +P + VV+W ++I Y N + L +FR
Sbjct: 313 VSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFRE 372
Query: 108 MLS--AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEK-RVKLNYILSAALVDMYAK 164
M + V P+ TF V++ CA G + K G+M EK R+ +D+ +K
Sbjct: 373 MCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSK 432
Query: 165 CGRID 169
G +
Sbjct: 433 AGETE 437
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 157/298 (52%), Gaps = 7/298 (2%)
Query: 57 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVK-NVRFLDGLRLFRGMLSAEVEP 115
++ + +K G A K+ + RD+++ LI G+ + N D +F+ M+ + +
Sbjct: 255 LVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKM 314
Query: 116 DGFTFASVVTGCARLGALCNAKWVHGLMLEK-RVKLNYILSAALVDMYAKCGRIDVSKQV 174
D +S++ C + ++ + +HG L+ +++ + L +L+DMYAK G I+ +
Sbjct: 315 DEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLA 374
Query: 175 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
F+ + V W ++I G HG AI +++RME E + P+ +TF+ +L ACSH G
Sbjct: 375 FEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQT 434
Query: 235 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP--VEPDVVIWRAL 292
G + ++ M N+ I+ + EH ++D+L R+G LEEA +I++ V W A
Sbjct: 435 ELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAF 494
Query: 293 LSACRIHGKKELAEFAIANISRLESG---DFVLLSNMYCSLKNWHNAERVRNMMKIGG 347
L ACR HG +L++ A + +E +++ L+++Y + W NA R +MK G
Sbjct: 495 LDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESG 552
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 99/174 (56%)
Query: 54 KNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV 113
K+++I+ +K G+ ARK+FD++ RDVV+W +I + + D L LF+ M +V
Sbjct: 50 KDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDV 109
Query: 114 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 173
+ + FT+ SV+ C LG L +HG + + N I+ +AL+ +YA+CG+++ ++
Sbjct: 110 KANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARL 169
Query: 174 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
FD++ + WNAMI+G + A + ++F M E PD TF +L+A
Sbjct: 170 QFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 117/257 (45%), Gaps = 7/257 (2%)
Query: 55 NLVIESLM-----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
NL++ S + + G+ + AR FD M RD+V+WN +I GY N LF+ ML
Sbjct: 147 NLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLML 206
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
+ +PD FTF S++ + L +HGL ++ + L +LV+ Y KCG +
Sbjct: 207 TEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLA 266
Query: 170 VSKQVFDTVARDHVSVWNAMINGLAVH-GLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
+ ++ + + + A+I G + DA +F M D + +LK C
Sbjct: 267 NAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKIC 326
Query: 229 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 288
+ V GR+ I+ + +++D+ ++G +E+A + M E DV
Sbjct: 327 TTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK-EKDVRS 385
Query: 289 WRALLSACRIHGKKELA 305
W +L++ HG E A
Sbjct: 386 WTSLIAGYGRHGNFEKA 402
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Query: 139 VHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGL 198
+HG + N L L+D+Y K G + ++++FD +++ V W AMI+ + G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 199 ALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHY 257
DA+ +F M E+V + T+ +LK+C G + EG + H ++ + L
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGN--CAGNLIVR 151
Query: 258 GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 293
++ L R G +EEA +M E D+V W A++
Sbjct: 152 SALLSLYARCGKMEEARLQFDSMK-ERDLVSWNAMI 186
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N +I+ K+GE + A F++M +DV +W +LI GY ++ F + L+ M ++
Sbjct: 356 NSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIK 415
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKR-VKLNYILSAALVDMYAKCGRIDVSKQ 173
P+ TF S+++ C+ G ++ M+ K ++ + ++DM A+ G ++ +
Sbjct: 416 PNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYA 475
Query: 174 VF---DTVARDHVSVWNAMINGLAVHG-LALDAIAVFSRMEVENVLP 216
+ + + S W A ++ HG + L +A + +E P
Sbjct: 476 LIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKP 522
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 116/221 (52%), Gaps = 4/221 (1%)
Query: 57 VIESLM----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 112
++ SLM K G + ++FD++ R+V W +I YV+N G+ +FR ML ++
Sbjct: 455 LVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSK 514
Query: 113 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 172
PD T V+T C+ L AL K +HG +L+K + +SA ++ MY KCG + +
Sbjct: 515 HRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSAN 574
Query: 173 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 232
FD VA W A+I + L DAI F +M P++ TF +L CS G
Sbjct: 575 FSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAG 634
Query: 233 LVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEA 273
V+E FN+M + +QP EHY +++LL R G +EEA
Sbjct: 635 FVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 126/275 (45%), Gaps = 7/275 (2%)
Query: 48 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 107
V F + +I+ K G+ R+VF R+ ++W L+ GY N RF LR
Sbjct: 349 VEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVW 408
Query: 108 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 167
M PD T A+V+ CA L A+ K +H L+ N L +L+ MY+KCG
Sbjct: 409 MQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGV 468
Query: 168 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
+ ++FD + + +V W AMI+ + I VF M + PDS+T +L
Sbjct: 469 PEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTV 528
Query: 228 CSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 286
CS + G+E H +I++ F P + ++ + G+ G+L A A+ V+ +
Sbjct: 529 CSDLKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDLRSANFSFDAVAVKGSL 586
Query: 287 VIWRALLSACRIHGKKELAEFAIANISRLESGDFV 321
W A++ A +G EL AI ++ S F
Sbjct: 587 T-WTAIIEA---YGCNELFRDAINCFEQMVSRGFT 617
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 140/293 (47%), Gaps = 8/293 (2%)
Query: 19 ATYPSLVAALISTYARCHQPHIAHHVFSRVMDT--FSKNLVIESLMKAGECDIARKVFDK 76
T+ +L+ A + + H + H+ +++ F + ++ G A+KVFD+
Sbjct: 112 TTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDE 171
Query: 77 MPVRDVVTWNTLIGGYV--KNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 134
+V +WN L+ G V R+ D L F M V+ + ++ ++V A AL
Sbjct: 172 STSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALR 231
Query: 135 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLA 194
H L ++ + + L +LVDMY KCG++ ++++VFD + + VW AMI GLA
Sbjct: 232 QGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLA 291
Query: 195 VHGLALDAIAVFSRM-EVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQP 252
+ +A+ +F M E + P+S+ IL + G+E H ++++++ ++
Sbjct: 292 HNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQ 351
Query: 253 QLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
H G ++DL + G++ + + + + W AL+S +G+ + A
Sbjct: 352 PFVHSG-LIDLYCKCGDMASGRRVFYGSK-QRNAISWTALMSGYAANGRFDQA 402
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 152/292 (52%), Gaps = 9/292 (3%)
Query: 20 TYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLM-----KAGECDIARKVF 74
T + L++ +R + + V ++ NL++ES + + GE A + F
Sbjct: 182 TNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAF 241
Query: 75 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 134
D M +DV++W +I + + + +F GML+ P+ FT S++ C+ AL
Sbjct: 242 DMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALR 301
Query: 135 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLA 194
+ VH L++++ +K + + +L+DMYAKCG I ++VFD ++ + W ++I A
Sbjct: 302 FGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHA 361
Query: 195 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQ 253
G +AI++F M+ +++ +++T V IL+AC G + G+E H I++N I+
Sbjct: 362 REGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNS--IEKN 419
Query: 254 LEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
+ T+V L + G +A N+++ +P DVV W A++S C G + A
Sbjct: 420 VYIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVVSWTAMISGCSSLGHESEA 470
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 5/186 (2%)
Query: 48 VMDTFSKNLVIESLM-----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGL 102
+ ++ KN+ I S + K GE A V ++P RDVV+W +I G + L
Sbjct: 412 IKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEAL 471
Query: 103 RLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMY 162
+ M+ VEP+ FT++S + CA +L + +H + + N + +AL+ MY
Sbjct: 472 DFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMY 531
Query: 163 AKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFV 222
AKCG + + +VFD++ ++ W AMI G A +G +A+ + RME E D F
Sbjct: 532 AKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFA 591
Query: 223 GILKAC 228
IL C
Sbjct: 592 TILSTC 597
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 128/260 (49%), Gaps = 8/260 (3%)
Query: 52 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 111
F NL I S ++ G+ ARKVFD MP ++ VTW +I GY+K + LF +
Sbjct: 119 FGNNL-ISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKH 177
Query: 112 EVE-PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 170
+ + F ++ C+R + VHG M++ V N I+ ++LV YA+CG +
Sbjct: 178 GIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTS 236
Query: 171 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 230
+ + FD + V W A+I+ + G + AI +F M LP+ T ILKACS
Sbjct: 237 ALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSE 296
Query: 231 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 290
+ GR+ +++ R +I+ + +++D+ + G + + + M + V W
Sbjct: 297 EKALRFGRQVHSLVVKR-MIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS-NRNTVTWT 354
Query: 291 ALLSACRIHGKKELAEFAIA 310
++++A H ++ E AI+
Sbjct: 355 SIIAA---HAREGFGEEAIS 371
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 161/320 (50%), Gaps = 14/320 (4%)
Query: 43 HVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGL 102
HV S ++D + K IE+ + ++ +P ++ N+L+ + D +
Sbjct: 352 HVQSALIDMYGKCNGIEN---------SALLYQSLPCLNLECCNSLMTSLMHCGITKDII 402
Query: 103 RLFRGMLSAEVEPDGFTFASVVTGCAR--LGALCNAKWVHGLMLEKRVKLNYILSAALVD 160
+F M+ D T ++V+ + +L + VH ++ + +S +L+D
Sbjct: 403 EMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLID 462
Query: 161 MYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSIT 220
Y K G+ +VS++VFD + ++ ++ING A +G+ D + + M+ N++PD +T
Sbjct: 463 AYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVT 522
Query: 221 FVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 280
+ +L CSH GLV EG F+ +++++ I P + Y MVDLLGRAG +E+A ++
Sbjct: 523 ILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQA 582
Query: 281 PVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGDF---VLLSNMYCSLKNWHNAE 337
+ D V W +LL +CRIH + + A + LE +F + +S Y + ++ +
Sbjct: 583 RGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISR 642
Query: 338 RVRNMMKIGGVRKKRGKSWI 357
++R + + ++ G S +
Sbjct: 643 QIREIAASRELMREIGYSSV 662
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 125/250 (50%), Gaps = 1/250 (0%)
Query: 52 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 111
++ N I+ L+K+G A + FD+M VRDVVT+N LI G + L + L+ M+S
Sbjct: 47 YTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSC 106
Query: 112 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
+ TF SV++ C+ VH ++ N + +ALV +YA +DV+
Sbjct: 107 GLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVA 166
Query: 172 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 231
++FD + +++V N ++ G + V+ RME+E V + +T+ +++ CSH
Sbjct: 167 LKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHD 226
Query: 232 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 291
LV EG++ +++ + +VD G+L + A+P E DV+ W +
Sbjct: 227 RLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVISWNS 285
Query: 292 LLSACRIHGK 301
++S C +G
Sbjct: 286 IVSVCADYGS 295
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 142/294 (48%), Gaps = 23/294 (7%)
Query: 3 STTAAKTHAKLIVHGY----ATYPSLVAALISTYARCHQPHIAHHVFSRVMDT-FSKNLV 57
S A + +A+++ G +T+PS V ++ S C + V RV+ F N+
Sbjct: 93 SLRAIELYAEMVSCGLRESASTFPS-VLSVCSDELFCRE---GIQVHCRVISLGFGCNMF 148
Query: 58 IES-LMKAGEC----DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 112
+ S L+ C D+A K+FD+M R++ N L+ + + + RLF L E
Sbjct: 149 VRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTG---ESKRLFEVYLRME 205
Query: 113 VE---PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSA-ALVDMYAKCGRI 168
+E +G T+ ++ GC+ + K +H L+++ ++ I A LVD Y+ CG +
Sbjct: 206 LEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDL 265
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
S + F+ V V WN++++ A +G LD++ +FS+M+ P F+ L C
Sbjct: 266 SGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFC 325
Query: 229 SHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP 281
S + G++ H +++ F + L ++D+ G+ +E + + +++P
Sbjct: 326 SRNSDIQSGKQIHCYVLKMGFDVS-SLHVQSALIDMYGKCNGIENSALLYQSLP 378
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 127/243 (52%), Gaps = 10/243 (4%)
Query: 26 AALISTYARCHQPHIAHHVFSRV---MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDV 82
AL+ +A+C A +F+ + + + N +I + G+ AR++FD MP R+V
Sbjct: 303 TALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNV 362
Query: 83 VTWNTLIGGYVKNVRFLDGLRLFRGMLS-AEVEPDGFTFASVVTGCARLGALCNAKWVHG 141
V+WN+LI GY N + + F M+ + +PD T SV++ C + L +
Sbjct: 363 VSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVD 422
Query: 142 LMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALD 201
+ + ++KLN +L+ MYA+ G + +K+VFD + V +N + A +G ++
Sbjct: 423 YIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVE 482
Query: 202 AIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMV 261
+ + S+M+ E + PD +T+ +L AC+ GL+ EG+ F ++N P +HY M
Sbjct: 483 TLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM- 536
Query: 262 DLL 264
DLL
Sbjct: 537 DLL 539
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 137/285 (48%), Gaps = 37/285 (12%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D S ++I K + + ARK FD+MP + VV+WN ++ GY +N D LRLF ML
Sbjct: 197 DVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDML 256
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC---- 165
V P+ T+ V++ C+ + + L+ EKRV+LN + AL+DM+AKC
Sbjct: 257 RLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQ 316
Query: 166 ----------------------------GRIDVSKQVFDTVARDHVSVWNAMINGLAVHG 197
G + ++Q+FDT+ + +V WN++I G A +G
Sbjct: 317 SARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNG 376
Query: 198 LALDAIAVFSRM-EVENVLPDSITFVGILKACSHCGLVNEGREHFN-IMQNRFLIQPQLE 255
A AI F M + + PD +T + +L AC H + G + I +N+ I+
Sbjct: 377 QAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQ--IKLNDS 434
Query: 256 HYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
Y +++ + R GNL EA + M E DVV + L +A +G
Sbjct: 435 GYRSLIFMYARGGNLWEAKRVFDEMK-ERDVVSYNTLFTAFAANG 478
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 115/287 (40%), Gaps = 71/287 (24%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
D + +N++++ +K + ARKVFD++ R WN +I GY K + +LF M
Sbjct: 135 DPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMM- 193
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
E D ++ ++TG A++ L NA
Sbjct: 194 ---PENDVVSWTVMITGFAKVKDLENA--------------------------------- 217
Query: 170 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
++ FD + V WNAM++G A +G DA+ +F+ M V P+ T+V ++ ACS
Sbjct: 218 --RKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACS 275
Query: 230 H----------CGLVNEGREHFNI---------------------MQNRFLIQPQLEHYG 258
L++E R N + N Q L +
Sbjct: 276 FRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWN 335
Query: 259 TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 305
M+ R G++ A + MP + +VV W +L++ +G+ LA
Sbjct: 336 AMISGYTRIGDMSSARQLFDTMP-KRNVVSWNSLIAGYAHNGQAALA 381
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 121/281 (43%), Gaps = 25/281 (8%)
Query: 70 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
R +FD + +V N++ + K D LRL+ + PD F+F V+ R
Sbjct: 59 TRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGR 118
Query: 130 LGALCNAKWVHGLMLEKR--VKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 187
G L A ++EK K Y+ + ++DMY K ++ +++VFD +++ S WN
Sbjct: 119 FGILFQA------LVEKLGFFKDPYVRNV-IMDMYVKHESVESARKVFDQISQRKGSDWN 171
Query: 188 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 247
MI+G G +A +F M +V+ ++ G K + R++F+ M +
Sbjct: 172 VMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKD----LENARKYFDRMPEK 227
Query: 248 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSACRIHGKKEL 304
++ + M+ + G E+A + M V P+ W ++SAC L
Sbjct: 228 SVVS-----WNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSL 282
Query: 305 AEFAIANIS--RLESGDFV--LLSNMYCSLKNWHNAERVRN 341
+ I R+ FV L +M+ ++ +A R+ N
Sbjct: 283 TRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN 323
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 97/181 (53%)
Query: 127 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 186
C L AK VHG + L+ + L++MY+ CG + + VF+ ++ ++ W
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 187 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 246
+I A +G DAI +FSR + E +PD F GI AC G V+EG HF M
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSR 383
Query: 247 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAE 306
+ I P +E Y ++V++ G L+EA ++ MP+EP+V +W L++ R+HG EL +
Sbjct: 384 DYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGD 443
Query: 307 F 307
+
Sbjct: 444 Y 444
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
+D S ++++E G + A VF+KM +++ TW +I + KN D + +F
Sbjct: 287 LDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRF 346
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSA------ALVDMY 162
PDG F + C LG + GL+ + + +Y ++ +LV+MY
Sbjct: 347 KEEGNIPDGQLFRGIFYACGMLGDV-----DEGLLHFESMSRDYGIAPSIEDYVSLVEMY 401
Query: 163 AKCGRIDVSKQVFDTVARD-HVSVWNAMINGLAVHG 197
A G +D + + + + + +V VW ++N VHG
Sbjct: 402 ALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHG 437
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 114/218 (52%), Gaps = 3/218 (1%)
Query: 93 VKNVRFLDGLRLFRG---MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVK 149
V+ V L RL++ +L PD F + CA L +L ++K VH L+ + +
Sbjct: 209 VEEVMRLCQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFR 268
Query: 150 LNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM 209
+ L+ ++ M+ +C I +K+VFD + + W+ M+ + +G+ DA+ +F M
Sbjct: 269 GDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEM 328
Query: 210 EVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGN 269
+ P+ TF+ + AC+ G + E HF+ M+N I P+ EHY ++ +LG+ G+
Sbjct: 329 TKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGH 388
Query: 270 LEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEF 307
L EA I+ +P EP W A+ + R+HG +L ++
Sbjct: 389 LVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDY 426
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 14/151 (9%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 114
N+VI + A++VFD M +D+ +W+ ++ Y N D L LF M ++
Sbjct: 275 NMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLK 334
Query: 115 PDGFTFASVVTGCARLGALCNA-------KWVHGLMLEKRVKLNYILSAALVDMYAKCGR 167
P+ TF +V CA +G + A K HG+ + L ++ + KCG
Sbjct: 335 PNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYL------GVLGVLGKCGH 388
Query: 168 -IDVSKQVFDTVARDHVSVWNAMINGLAVHG 197
++ + + D W AM N +HG
Sbjct: 389 LVEAEQYIRDLPFEPTADFWEAMRNYARLHG 419
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 174/367 (47%), Gaps = 39/367 (10%)
Query: 12 KLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV------MDTFSKNLVIESLMKAG 65
K++ +G +++ + Q +A + ++ +D +++I+ L K G
Sbjct: 218 KMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 277
Query: 66 ECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 121
D A +F++M ++ +++T+N LIGG+ R+ DG +L R M+ ++ P+ TF+
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 337
Query: 122 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 181
++ + G L A+ +H M+ + + + I +L+D + K +D + Q+ D +
Sbjct: 338 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
Query: 182 ----HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEG 237
++ +N +ING D + +F +M + V+ D++T+ +++ G +N
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 238 REHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM---IKAMPVEPDVVIWRALLS 294
+E F M +R + P + Y ++D L G E+A + I+ +E D+ I+ +
Sbjct: 458 KELFQEMVSR-KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII-- 514
Query: 295 ACRIHGKKELAEFAIANISRLESGDFVLLSNMYCS--LKNWHNAERVRNMMKIGGVRKKR 352
IHG + N S+++ +++CS LK + N+M IGG+ KK
Sbjct: 515 ---IHG--------MCNASKVDDA-----WDLFCSLPLKGVKPGVKTYNIM-IGGLCKKG 557
Query: 353 GKSWIEL 359
S EL
Sbjct: 558 PLSEAEL 564
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 8/204 (3%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLF 105
DT + +I+ K D A ++ D M + ++ T+N LI GY K R DGL LF
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
R M V D T+ +++ G LG L AK + M+ ++V N + L+D
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 166 GRIDVSKQVFDTVARDH----VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
G + + ++F+ + + + ++N +I+G+ DA +F + ++ V P T+
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546
Query: 222 VGILKACSHCGLVNEGREHFNIMQ 245
++ G ++E F M+
Sbjct: 547 NIMIGGLCKKGPLSEAELLFRKME 570
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 128/290 (44%), Gaps = 22/290 (7%)
Query: 25 VAALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKVFDKM- 77
++ +I+ + RC + +A +++ +T + + +I L G A ++ D+M
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 78 -----PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGA 132
P D++T NTL+ G + + + + L M+ +P+ T+ V+ + G
Sbjct: 186 EMGHKP--DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 243
Query: 133 LCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS----VWNA 188
A + M E+ +KL+ + + ++D K G +D + +F+ + ++ +N
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303
Query: 189 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 248
+I G G D + M + P+ +TF ++ + G + E E M +R
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363
Query: 249 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSA 295
I P Y +++D + +L++A M+ M +P++ + L++
Sbjct: 364 -IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 112/275 (40%), Gaps = 14/275 (5%)
Query: 22 PSLVAALISTYARCHQPHIAHHVFSRVMDTFS-KNLVIESLMKAGECDIA--------RK 72
P L+ A + P+ R FS +NL +++G DI R
Sbjct: 19 PRLLETGTLRIALINCPNELSFCCERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRD 78
Query: 73 VFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGA 132
+ P+ V+ ++ L K ++ L L + M + + +T + ++ R
Sbjct: 79 MIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRK 138
Query: 133 LCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA----RDHVSVWNA 188
LC A G +++ + N I + L++ GR+ + ++ D + + + N
Sbjct: 139 LCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINT 198
Query: 189 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 248
++NGL + G +A+ + +M P+++T+ +L G E M+ R
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 249 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE 283
I+ Y ++D L + G+L+ A N+ M ++
Sbjct: 259 -IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 292
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 127 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 186
C AL AK VH + + ++++MY+ CG ++ + VF+++ ++ W
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 187 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 246
+I A +G DAI FSR + E PD F I AC G +NEG HF M
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYK 310
Query: 247 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
+ I P +EHY ++V +L G L+EA +++M EP+V +W L++ R+HG
Sbjct: 311 EYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHG 362
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 4/152 (2%)
Query: 48 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 107
+ D + N +IE G + A VF+ MP R++ TW +I + KN + D + F
Sbjct: 213 ISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSR 272
Query: 108 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS--AALVDMYAKC 165
+PDG F + C LG + N +H + K + + +LV M A+
Sbjct: 273 FKQEGNKPDGEMFKEIFFACGVLGDM-NEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEP 331
Query: 166 GRIDVSKQVFDTVARDHVSVWNAMINGLAVHG 197
G +D + + +++ +V +W ++N VHG
Sbjct: 332 GYLDEALRFVESM-EPNVDLWETLMNLSRVHG 362
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 133/267 (49%), Gaps = 12/267 (4%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLF 105
D + VI L K GE D+A + +KM DVV ++T+I K D L LF
Sbjct: 204 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLF 263
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
M + + PD FT++S+++ G +A + MLE+++ N + +L+D +AK
Sbjct: 264 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE 323
Query: 166 GRIDVSKQVFDTVAR----DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
G++ ++++FD + + ++ +N++ING +H +A +F+ M ++ LPD +T+
Sbjct: 324 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
Query: 222 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM- 280
++ V +G E F M R L+ + Y T++ +A + + A + K M
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT-YTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 281 --PVEPDVVIWRALLSACRIHGKKELA 305
V P+++ + LL +GK E A
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 158/348 (45%), Gaps = 57/348 (16%)
Query: 12 KLIVHGYATYPSLV--AALISTYARCHQPHIAHHVFSRV------MDTFSKNLVIESLMK 63
+++V G P LV A+I+ + +P +A ++ +++ D + VI+SL K
Sbjct: 195 RMVVKG--CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 64 AGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFT 119
D A +F +M + DV T+++LI R+ D RL ML ++ P+ T
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 120 FASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD-TV 178
F S++ A+ G L A+ + M+++ + N + +L++ + R+D ++Q+F V
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 179 ARD---HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA---CSHCG 232
++D V +N +ING +D + +F M ++ +++T+ ++ S C
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 233 --------LVNEGREHFNIMQNRFLI------------------------QPQLEHYGTM 260
+V++G H NIM L+ +P + Y M
Sbjct: 433 NAQMVFKQMVSDGV-HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 261 VDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSACRIHGKKELA 305
+ + +AG +E+ ++ ++ V+PDV+ + ++S G KE A
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 125/275 (45%), Gaps = 17/275 (6%)
Query: 22 PSLVA--ALISTYARCHQPHIAHHVFSRVMD-TFSKNLVIESLMKAGEC-----DIARKV 73
P++V +LI +A+ + A +F ++ + N+V + + G C D A+++
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 74 FDKMPVRD----VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
F M +D VVT+NTLI G+ K + +DG+ LFR M + + T+ +++ G +
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH----VSV 185
NA+ V M+ V N + L+D K G+++ + VF+ + + +
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 245
+N M G+ G D +F + ++ V PD I + ++ GL E F M+
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK 547
Query: 246 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 280
+ P Y T++ R G+ + +IK M
Sbjct: 548 EDGPL-PDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 107/245 (43%), Gaps = 12/245 (4%)
Query: 68 DIARKVFDKM----PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 123
D A +F +M P +V ++ L+ K +F + M V + +T+ +
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA---- 179
+ R L A + G M++ + + +L++ + RI + + D +
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 180 RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE 239
+ + +++GL H A +A+A+ RM V+ PD +T+ ++ G +
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 240 HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSAC 296
N M+ + I+ + Y T++D L + ++++A N+ M + PDV + +L+S
Sbjct: 227 LLNKME-KGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 297 RIHGK 301
+G+
Sbjct: 286 CNYGR 290
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 173/367 (47%), Gaps = 39/367 (10%)
Query: 12 KLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV------MDTFSKNLVIESLMKAG 65
+++ G+ ++ + Q +A + ++ +D +++I+ L K G
Sbjct: 202 RMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 66 ECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 121
D A +F++M ++ D++ + TLI G+ R+ DG +L R M+ ++ PD F+
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Query: 122 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 181
+++ + G L A+ +H M+++ + + + +L+D + K ++D + + D +
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 182 ----HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEG 237
++ +N +ING L D + +F +M + V+ D++T+ +++ G +
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 238 REHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM---IKAMPVEPDVVIWRALLS 294
+E F M +R ++P + Y ++D L G E+A + I+ +E D+ I+ +
Sbjct: 442 KELFQEMVSR-RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII-- 498
Query: 295 ACRIHGKKELAEFAIANISRLESGDFVLLSNMYCS--LKNWHNAERVRNMMKIGGVRKKR 352
IHG + N S+++ +++CS LK + N+M IGG+ KK
Sbjct: 499 ---IHG--------MCNASKVDDA-----WDLFCSLPLKGVKPDVKTYNIM-IGGLCKKG 541
Query: 353 GKSWIEL 359
S +L
Sbjct: 542 SLSEADL 548
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 16/240 (6%)
Query: 22 PSLVA--ALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKV 73
P +VA ALI + + + A + ++ DT + +I+ K + D A +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 74 FDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
D M + ++ T+N LI GY K DGL LFR M V D T+ +++ G
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH----VSV 185
LG L AK + M+ +RV+ + + L+D G + + ++F+ + + + +
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 245
+N +I+G+ DA +F + ++ V PD T+ ++ G ++E F M+
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 115/272 (42%), Gaps = 19/272 (6%)
Query: 25 VAALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKVFDKM- 77
++ +I+ RC + +A +++ DT + + +I L G A ++ D+M
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169
Query: 78 -----PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGA 132
P ++T N L+ G N + D + L M+ +P+ T+ V+ + G
Sbjct: 170 EMGHKPT--LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 133 LCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA----RDHVSVWNA 188
A + M E+++KL+ + + ++D K G +D + +F+ + + + ++
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 189 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 248
+I G G D + M + PD + F ++ G + E E M R
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 249 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 280
I P Y +++D + L++A +M+ M
Sbjct: 348 -ISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 97/191 (50%)
Query: 127 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 186
C + AL A+ VH ++ + A+++MY+ C +D + +VF+ + +
Sbjct: 129 CGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTL 188
Query: 187 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 246
M+ +G +AI +F+R + E P+ F + C+ G V EG F M
Sbjct: 189 CVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYR 248
Query: 247 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAE 306
+ I P +EHY ++ +L +G+L+EA N ++ MP+EP V +W L++ R+HG EL +
Sbjct: 249 EYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGD 308
Query: 307 FAIANISRLES 317
+ +L++
Sbjct: 309 RCAELVEKLDA 319
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 56 LVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 111
+V+ L K G+ D+A + +KM DVV +NT+I K D L LF+ M +
Sbjct: 230 VVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 289
Query: 112 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
+ P+ T++S+++ G +A + M+EK++ N + AL+D + K G+ +
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 172 KQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
++++D + + + +N+++NG +H A +F M ++ PD +T+ ++K
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 228 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEP 284
V +G E F M +R L+ + Y T++ L G+ + A + K M V P
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVT-YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468
Query: 285 DVVIWRALLSACRIHGKKELA 305
D++ + LL +GK E A
Sbjct: 469 DIMTYSILLDGLCNNGKLEKA 489
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 122/279 (43%), Gaps = 11/279 (3%)
Query: 12 KLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDT--FSKNLVIESLMKAGECDI 69
K I T+ +L+ A + + + R +D F+ N ++ D
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 70 ARKVFDKMPVRD----VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 125
A+++F+ M +D VVT+NTLI G+ K+ R DG LFR M + D T+ +++
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 126 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS- 184
G G NA+ V M+ V + + + L+D G+++ + +VFD + + +
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 185 ---VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 241
++ MI G+ G D +F + ++ V P+ +T+ ++ L+ E
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 242 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 280
M+ + P Y T++ R G+ + +I+ M
Sbjct: 564 KKMKEDGPL-PNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 122/276 (44%), Gaps = 20/276 (7%)
Query: 52 FSKNLVIESLMKAGECDIARKVFDKM------PVRDVVTWNTLIGGYVKNVRFLDGLRLF 105
++ N++I + + +A + KM P +VT ++L+ GY R D + L
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVALV 178
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
M+ PD TF +++ G A + M+++ + N + +V+ K
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 166 GRIDVSKQVFDTVA----RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
G D++ + + + V ++N +I+ L + DA+ +F ME + + P+ +T+
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 222 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM- 280
++ G ++ + + M + I P L + ++D + G EA + M
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 281 --PVEPDVVIWRALLSACRIHGK----KELAEFAIA 310
++PD+ + +L++ +H + K++ EF ++
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 115/249 (46%), Gaps = 13/249 (5%)
Query: 127 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 186
C + AL A+ VH + L+ +++MY+ C D + VF+ + + + W
Sbjct: 122 CGEVEALEEARVVHDCI----TPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETW 177
Query: 187 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 246
MI LA +G AI +F+R E PD F + AC G +NEG HF M
Sbjct: 178 GTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYR 237
Query: 247 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAE 306
+ + +E Y ++++L G+L+EA + ++ M VEP V +W L++ C + G EL +
Sbjct: 238 DYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGD 297
Query: 307 FAIANISRLESGDFVLLSN--MYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIH 364
I +L++ SN + + + E+++ + +R K +H
Sbjct: 298 RFAELIKKLDASRMSKESNAGLVAAKASDSAMEKLKELRYCQMIRDDPKK-------RMH 350
Query: 365 QFNAADQSH 373
+F A D SH
Sbjct: 351 EFRAGDTSH 359
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 80/196 (40%), Gaps = 26/196 (13%)
Query: 17 GY-ATYPSLV--AALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKV 73
GY +P L+ A L + + H + +D S + VIE D A V
Sbjct: 107 GYIVDFPRLLGLAKLCGEVEALEEARVVHDCIT-PLDARSYHTVIEMYSGCRSTDDALNV 165
Query: 74 FDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGAL 133
F++MP R+ TW T+I KN + +F + +PD F +V C +G +
Sbjct: 166 FNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDI 225
Query: 134 CNAKWVH--------GLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR----D 181
N +H G++L +N +++M A CG +D + D V R
Sbjct: 226 -NEGLLHFESMYRDYGMVLSMEDYVN------VIEMLAACGHLD---EALDFVERMTVEP 275
Query: 182 HVSVWNAMINGLAVHG 197
V +W ++N V G
Sbjct: 276 SVEMWETLMNLCWVQG 291
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 148/306 (48%), Gaps = 23/306 (7%)
Query: 12 KLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV------MDTFSKNLVIESLMKAG 65
+++ G+ +++ + Q +A + ++ +D +++I+ L K G
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 66 ECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 121
D A +F++M ++ D++T+NTLIGG+ R+ DG +L R M+ ++ P+ TF+
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFS 337
Query: 122 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV--- 178
++ + G L A + M+++ + N I +L+D + K R++ + Q+ D +
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 179 -ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEG 237
+ +N +ING D + +F M + V+ +++T+ +++ G +
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 238 REHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM---IKAMPVEPDVVIWRALLS 294
++ F M +R ++P + Y ++D L G LE+A + I+ +E D+ I+ +
Sbjct: 458 KKLFQEMVSR-RVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII-- 514
Query: 295 ACRIHG 300
IHG
Sbjct: 515 ---IHG 517
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 129/307 (42%), Gaps = 26/307 (8%)
Query: 8 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESL 61
+ +K I H T ++ +I+ + RC + A ++M DT N ++ L
Sbjct: 113 QMESKGIAHSIYT----LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGL 168
Query: 62 MKAGECDIARKVFDKM------PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEP 115
A ++ D+M P ++T NTL+ G N + D + L M+ +P
Sbjct: 169 CLECRVSEALELVDRMVEMGHKPT--LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQP 226
Query: 116 DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF 175
+ T+ V+ + G A + M E+ +KL+ + + ++D K G +D + +F
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF 286
Query: 176 DTVA----RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 231
+ + + + +N +I G G D + M + P+ +TF ++ +
Sbjct: 287 NEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKE 346
Query: 232 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVI 288
G + E + M R I P Y +++D + LEEA M+ M +PD++
Sbjct: 347 GKLREADQLLKEMMQRG-IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMT 405
Query: 289 WRALLSA 295
+ L++
Sbjct: 406 FNILING 412
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 90/186 (48%), Gaps = 8/186 (4%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDV----VTWNTLIGGYVKNVRFLDGLRLF 105
D + N++I KA D ++F +M +R V VT+NTL+ G+ ++ + +LF
Sbjct: 402 DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
+ M+S V PD ++ ++ G G L A + G + + +++L+ + ++
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNA 521
Query: 166 GRIDVSKQVFDTVARDHVSV----WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
++D + +F ++ V + +N MI+ L A +F +M E PD +T+
Sbjct: 522 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 222 VGILKA 227
+++A
Sbjct: 582 NILIRA 587
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 129/263 (49%), Gaps = 12/263 (4%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLF 105
D + V+ L K G+ D+A + KM DVV +NT+I G K D L LF
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
M + + PD FT++S+++ G +A + M+E+++ N + +AL+D + K
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 166 GRIDVSKQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
G++ +++++D + + + ++++ING +H +A +F M ++ P+ +T+
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 401
Query: 222 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM- 280
++K V EG E F M R L+ + Y T++ +A + + A + K M
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT-YTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 281 --PVEPDVVIWRALLSACRIHGK 301
V P+++ + LL +GK
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGK 483
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 156/344 (45%), Gaps = 23/344 (6%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKM------PVRDVVTWNTLIGGYVKNVRFLDGLR 103
D ++ ++ I + + +A V KM P D+VT ++L+ GY + R D +
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEP--DIVTLSSLLNGYCHSKRISDAVA 174
Query: 104 LFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYA 163
L M+ +PD FTF +++ G A + M+++ + + + +V+
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 164 KCGRIDVSKQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSI 219
K G ID++ + + + + ++N +I+GL + DA+ +F+ M+ + + PD
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 220 TFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKA 279
T+ ++ + G ++ + M R I P + + ++D + G L EA +
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 280 M---PVEPDVVIWRALLSACRIHGKKELAEFAIA-NISRLESGDFVLLSNMYCSLKNWHN 335
M ++PD+ + +L++ +H + + A+ IS+ + V S + +K +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL---IKGFCK 410
Query: 336 AERVRNMMKIGGVRKKRG--KSWIELGDSIHQ-FNAADQSHAEM 376
A+RV M++ +RG + + IH F A D +A+M
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 132/300 (44%), Gaps = 47/300 (15%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLF 105
D F+ + +I L G A ++ M R +VVT++ LI +VK + ++ +L+
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
M+ ++PD FT++S++ G L AK + LM+ K N + + L+ + K
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 166 GRIDVSKQVF----------DTV-----------ARD------------------HVSVW 186
R++ ++F +TV ARD ++ +
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 187 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 246
N +++GL +G A+ VF ++ + PD T+ +++ G V +G E F +
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 247 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE---PDVVIWRALLSACRIHGKKE 303
+ + P + Y TM+ R G+ EEA +++K M + P+ + L+ A G +E
Sbjct: 532 KG-VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 590
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 146/317 (46%), Gaps = 20/317 (6%)
Query: 55 NLVIESLMKAGECDIARKVFDKMP----VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 110
NL+I L++A +IA+ VF ++ + DV T+N L+ Y K+ + + L++ M +
Sbjct: 789 NLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMST 848
Query: 111 AEVEPDGFTFASVVTGCARLGALCNA-KWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
E E + T V++G + G + +A + LM ++ L+D +K GR+
Sbjct: 849 HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 908
Query: 170 VSKQVF----DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL 225
+KQ+F D R + +++N +ING G A A A+F RM E V PD T+ ++
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Query: 226 KACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---- 281
G V+EG +F ++ L P + Y +++ LG++ LEEA + M
Sbjct: 969 DCLCMVGRVDEGLHYFKELKESGL-NPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRG 1027
Query: 282 VEPDVVIWRALLSACRIHGKKELAEFAIANISR--LESGDFV---LLSNMYCSLKNWHNA 336
+ PD+ + +L+ I G E A I R LE F L+ S K H A
Sbjct: 1028 ITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEH-A 1086
Query: 337 ERVRNMMKIGGVRKKRG 353
V M GG G
Sbjct: 1087 YAVYQTMVTGGFSPNTG 1103
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 112/241 (46%), Gaps = 11/241 (4%)
Query: 50 DTFSKNLVIESLMKAGECDIARKV-FDKMPVRD----VVTWNTLIGGYVKNVRFLDGLRL 104
+T + N+VI L+KAG D A + +D M RD T+ LI G K+ R + +L
Sbjct: 854 NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL 913
Query: 105 FRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK 164
F GML P+ + ++ G + G A + M+++ V+ + + LVD
Sbjct: 914 FEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 973
Query: 165 CGRIDVS----KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSI 219
GR+D K++ ++ V +N +INGL +A+ +F+ M+ + PD
Sbjct: 974 VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY 1033
Query: 220 TFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKA 279
T+ ++ G+V E + +N +Q R ++P + + ++ +G E A + +
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQ-RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQT 1092
Query: 280 M 280
M
Sbjct: 1093 M 1093
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 110/257 (42%), Gaps = 12/257 (4%)
Query: 48 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVV----TWNTLIGGYVKNVRFLDGLR 103
V D + +++++L KAG A D M + ++ T+NTLI G ++ R D L
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 419
Query: 104 LFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYA 163
LF M S V+P +T+ + + G +A M K + N + A + A
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 479
Query: 164 KCGRIDVSKQVF----DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSI 219
K GR +KQ+F D +N M+ + G +AI + S M PD I
Sbjct: 480 KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVI 539
Query: 220 TFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKA 279
++ V+E + F M+ ++P + Y T++ LG+ G ++EA + +
Sbjct: 540 VVNSLINTLYKADRVDEAWKMFMRMK-EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598
Query: 280 M---PVEPDVVIWRALL 293
M P+ + + L
Sbjct: 599 MVQKGCPPNTITFNTLF 615
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 19/251 (7%)
Query: 2 DSTTAAKTHAKLIVHGYATYPSLVAALISTY--ARCHQPHIAHHVF------SRVMDTFS 53
DS +A +T K+ G A P++VA S Y A+ + A +F V D+ +
Sbjct: 448 DSVSALETFEKMKTKGIA--PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 54 KNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGML 109
N++++ K GE D A K+ +M DV+ N+LI K R + ++F M
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 110 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 169
+++P T+ +++ G + G + A + M++K N I L D K +
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 170 VS-KQVF---DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL 225
++ K +F D V +N +I GL +G +A+ F +M+ + V PD +T +L
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLL 684
Query: 226 KACSHCGLVNE 236
L+ +
Sbjct: 685 PGVVKASLIED 695
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 136/295 (46%), Gaps = 18/295 (6%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHV--FSRVMDTFSKNLVIESLMKAGEC 67
++I TY ++ +L P+ + F V++ +S N +I L+K+ C
Sbjct: 145 QKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFC 204
Query: 68 DIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 123
A +V+ +M + + T+++L+ G K + L + M + ++P+ +TF
Sbjct: 205 TEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTIC 264
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR--- 180
+ R G + A + M ++ + + L+D ++D +K+VF+ +
Sbjct: 265 IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH 324
Query: 181 --DHVSVWNAMINGLAVHGLALDAIAVF-SRMEVENVLPDSITFVGILKACSHCGLVNEG 237
D V+ + +++ + LD++ F S ME + +PD +TF ++ A G E
Sbjct: 325 KPDRVT-YITLLDRFS-DNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEA 382
Query: 238 REHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM---IKAMPVEPDVVIW 289
+ ++M+++ ++ P L Y T++ L R L++A + ++++ V+P +
Sbjct: 383 FDTLDVMRDQGIL-PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTY 436
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 133/280 (47%), Gaps = 14/280 (5%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLF 105
D F+ V+ L K G+ D+A + KM DVV + T+I D L LF
Sbjct: 219 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLF 278
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
M + + P+ T+ S++ G +A + M+E+++ N + +AL+D + K
Sbjct: 279 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 338
Query: 166 GRIDVSKQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
G++ +++++D + + + ++++ING +H +A +F M ++ P+ +T+
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 222 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM- 280
++K V EG E F M R L+ + Y T++ L +AG+ + A + K M
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT-YNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 281 --PVEPDVVIWRALLSACRIHGK--KELAEFAIANISRLE 316
V PD++ + LL +GK K L F S++E
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 130/264 (49%), Gaps = 14/264 (5%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 110
N +I L G A ++ M R +VVT++ LI +VK + ++ +L+ M+
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 111 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 170
++PD FT++S++ G L AK + LM+ K N + L+ + K R++
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 171 SKQVFDTVAR----DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 226
++F +++ + +N +I GL G A +F +M + V PD IT+ +L
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 227 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VE 283
G + + F +Q + ++P + Y M++ + +AG +E+ ++ ++ V+
Sbjct: 474 GLCKYGKLEKALVVFEYLQ-KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Query: 284 PDVVIWRALLSA-CRIHGKKELAE 306
P+V+I+ ++S CR G KE A+
Sbjct: 533 PNVIIYTTMISGFCR-KGLKEEAD 555
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 99/219 (45%), Gaps = 43/219 (19%)
Query: 21 YPSLVA--ALISTYARCHQPHIAHHVFSR------VMDTFSKNLVIESLMKAGECDIARK 72
+P++V LI + + + +F V +T + N +I+ L +AG+CD+A+K
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 73 VFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCA 128
+F KM D++T++ L+ G K + L +F + +++EPD +T+ ++ G
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511
Query: 129 RLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNA 188
+ G + + + + K VK N I ++
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVI-------------------------------IYTT 540
Query: 189 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
MI+G GL +A A+F M+ + LP+S T+ +++A
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 134/276 (48%), Gaps = 12/276 (4%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLF 105
D + +V+ L K G+ D+A + +KM V+ +NT+I G K D L LF
Sbjct: 220 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 279
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
+ M + + P+ T++S+++ G +A + M+E+++ + +AL+D + K
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 166 GRIDVSKQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
G++ +++++D + + + ++++ING +H +A +F M ++ PD +T+
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 222 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM- 280
++K V EG E F M R L+ + Y ++ L +AG+ + A + K M
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT-YNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 281 --PVEPDVVIWRALLSACRIHGKKELAEFAIANISR 314
V P+++ + LL +GK E A + R
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 127/260 (48%), Gaps = 12/260 (4%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 110
N +I+ L K D A +F +M + +VVT+++LI R+ D RL M+
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 111 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 170
++ PD FTF++++ + G L A+ ++ M+++ + + + ++L++ + R+D
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 171 SKQVFDTVARDH----VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 226
+KQ+F+ + H V +N +I G + + + VF M ++ +++T+ +++
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 227 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEAC---NMIKAMPVE 283
G + +E F M + + P + Y T++D L + G LE+A ++ +E
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 284 PDVVIWRALLSACRIHGKKE 303
P + + ++ GK E
Sbjct: 499 PTIYTYNIMIEGMCKAGKVE 518
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 117/245 (47%), Gaps = 12/245 (4%)
Query: 68 DIARKVFDKM----PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 123
D A +F +M P ++ ++ L+ K +F + L M + + + +T++ +
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID----VSKQVFDTVA 179
+ R L A V G M++ + N + ++L++ Y RI + Q+F T
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 180 RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE 239
+ + +N +I+GL +H A +A+A+ RM + PD +T+ ++ G +
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 240 HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSAC 296
N M+ L +P + Y T++D L + ++++A N+ K M + P+VV + +L+S
Sbjct: 243 LLNKMEQGKL-EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 297 RIHGK 301
+G+
Sbjct: 302 CNYGR 306
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 106/239 (44%), Gaps = 46/239 (19%)
Query: 2 DSTTAAKTHAKLIVHGYATYPSLVA--ALISTYARCHQPHIAHHVFSR------VMDTFS 53
D AK + +V + +P +V LI + + + VF V +T +
Sbjct: 375 DRLDEAKQMFEFMVSKHC-FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 54 KNLVIESLMKAGECDIARKVFDKMPVRD-----VVTWNTLIGGYVKNVRFLDGLRLFRGM 108
N++I+ L +AG+CD+A+++F +M V D ++T+NTL+ G KN + + +F +
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEM-VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
+++EP +T+ ++ G + G + + W D++
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDG-W---------------------DLFCNLSLK 530
Query: 169 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
V + V +N MI+G G +A A+F M+ + LP+S + +++A
Sbjct: 531 GV---------KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 126/261 (48%), Gaps = 12/261 (4%)
Query: 56 LVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 111
+V+ L K G+ D+A + +KM DVV +NT+I K D L LF+ M +
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 112 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 171
+ P+ T++S+++ G +A + M+EK++ N + AL+D + K G+ +
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 172 KQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
+++ D + + + +N++ING +H A +F M ++ PD T+ ++K
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 228 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEP 284
V +G E F M +R L+ + Y T++ L G+ + A + K M V P
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVT-YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 285 DVVIWRALLSACRIHGKKELA 305
D++ + LL +GK E A
Sbjct: 394 DIMTYSILLDGLCNNGKLEKA 414
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 120/279 (43%), Gaps = 11/279 (3%)
Query: 12 KLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDT--FSKNLVIESLMKAGECDI 69
K I T+ +L+ A + + + R +D F+ N +I D
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 70 ARKVFDKMPVRDVV----TWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 125
A+++F+ M +D T+NTLI G+ K+ R DG LFR M + D T+ +++
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 126 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS- 184
G G NA+ V M+ V + + + L+D G+++ + +VFD + + +
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 185 ---VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 241
++ MI G+ G D +F + ++ V P+ +T+ ++ L+ E
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 242 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 280
M+ + P Y T++ R G+ + +I+ M
Sbjct: 489 KKMKEDGPL-PDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 125/277 (45%), Gaps = 22/277 (7%)
Query: 52 FSKNLVIESLMKAGECDIARKVFDKM------PVRDVVTWNTLIGGYVKNVRFLDGLRLF 105
++ N++I + + +A + KM P +VT ++L+ GY R D + L
Sbjct: 46 YTYNILINCFCRRSQISLALALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVALV 103
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
M+ PD TF +++ G A + M+++ + N + +V+ K
Sbjct: 104 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 163
Query: 166 GRIDVSKQVFDTVA----RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
G ID++ + + + V ++N +I+ L + DA+ +F ME + + P+ +T+
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 222 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEA----CNMI 277
++ G ++ + + M + I P L + ++D + G EA +MI
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 282
Query: 278 KAMPVEPDVVIWRALLSACRIHGK----KELAEFAIA 310
K ++PD+ + +L++ +H + K++ EF ++
Sbjct: 283 KR-SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 318
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 156/347 (44%), Gaps = 26/347 (7%)
Query: 22 PSLV--AALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKV 73
P LV ++++S + R A F+ V D ++I+ + G +A +
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 74 FDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
++M + DVVT+NT++ G K + +LF M + PD +T ++ G +
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF-DTVARDHVSV--- 185
LG L NA + M EKR++L+ + L+D + K G ID +K+++ D V+++ +
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 245
++ ++N L G +A V+ M +N+ P + ++K G ++G M
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 246 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE-----PDVVIWRALLSA-CRIH 299
+ + P Y T++ R N+ +A ++K M E PDV + ++L CR +
Sbjct: 613 SEGFV-PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 300 GKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMM 343
KE I R + D + + N + S N A R+ + M
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 136/310 (43%), Gaps = 18/310 (5%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRD----VVTWNTLIGGYVKNVRFLDGLRLF 105
D + N +I + G + A ++ + MP + V T+NT+I G K+ ++ +F
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
ML + + PD T+ S++ + G + + V M + V + + ++++ ++ +
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 166 GRIDVSKQVFDTVAR-----DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSIT 220
G +D + F++V D+V ++ +I G G+ A+ + + M + D +T
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNV-IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 221 FVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 280
+ IL ++ E + FN M R L P ++D + GNL+ A + + M
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALF-PDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Query: 281 P---VEPDVVIWRALLSACRIHGKKELAEFAIANISRLE----SGDFVLLSNMYCSLKNW 333
+ DVV + LL G + A+ A++ E + +L N CS +
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566
Query: 334 HNAERVRNMM 343
A RV + M
Sbjct: 567 AEAFRVWDEM 576
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 157 ALVDMYAKCGRIDVSKQVFDTVARDHVSV----WNAMINGLAVHGLALDAIAVFSRMEVE 212
AL+ + G ++++ V+ ++R V + N M+N L G S+++ +
Sbjct: 205 ALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEK 264
Query: 213 NVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEE 272
V PD +T+ ++ A S GL+ E E N M + P + Y T+++ L + G E
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGF-SPGVYTYNTVINGLCKHGKYER 323
Query: 273 ACNMIKAM---PVEPDVVIWRALL-SACR 297
A + M + PD +R+LL AC+
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACK 352
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 156/351 (44%), Gaps = 28/351 (7%)
Query: 28 LISTYARCH----QPHIAHHVFSR------VMDTFSKNLVIESLMKAGECDIARKVFDKM 77
L++TY C +P +F V D S +++I L+KAG + ++F M
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM 578
Query: 78 P----VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGAL 133
V D +N +I G+ K + +L M + EP T+ SV+ G A++ L
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638
Query: 134 CNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS----VWNAM 189
A + KR++LN ++ ++L+D + K GRID + + + + + ++ WN++
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698
Query: 190 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 249
++ L +A+ F M+ P+ +T+ ++ N+ + MQ + +
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Query: 250 IQPQLEHYGTMVDLLGRAGNLEEA---CNMIKAMPVEPDVVIWRALLSACRIHGKKELAE 306
+P Y TM+ L +AGN+ EA + KA PD + A++ +G + +
Sbjct: 759 -KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS-NGNRAMDA 816
Query: 307 FAIANISRLESGDFVLLSNMYCS--LKNWHNAERVRNMMKIGGVRKKRGKS 355
F++ +R + + N C L H + + +G V ++ GK+
Sbjct: 817 FSLFEETRRRG---LPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKA 864
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 114/252 (45%), Gaps = 12/252 (4%)
Query: 55 NLVIESLMKAGECDIARKVFDKMP----VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 110
N++I+ L +AG+ D A ++ D M +V T N ++ K+ + + +F M
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY 440
Query: 111 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 170
PD TF S++ G ++G + +A V+ ML+ + N I+ +L+ + GR +
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500
Query: 171 SKQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 226
+++ + + S + N ++ + G A+F ++ +PD+ ++ ++
Sbjct: 501 GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560
Query: 227 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV---E 283
G NE E F M+ + + Y ++D + G + +A +++ M E
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVL-DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Query: 284 PDVVIWRALLSA 295
P VV + +++
Sbjct: 620 PTVVTYGSVIDG 631
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 8/201 (3%)
Query: 85 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA-KWVHGLM 143
+ TLI G+ K R L L M S+ ++ D + + ++G + A K+ H +
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 144 LEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH----VSVWNAMINGLAVHGLA 199
+K + + +++ + K R+D + ++F+ + ++ +N MI G G
Sbjct: 266 ANG-LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF 324
Query: 200 LDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGT 259
+A ++ R + +P I + IL G V+E + F M+ P L Y
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD--AAPNLSTYNI 382
Query: 260 MVDLLGRAGNLEEACNMIKAM 280
++D+L RAG L+ A + +M
Sbjct: 383 LIDMLCRAGKLDTAFELRDSM 403
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 118/262 (45%), Gaps = 17/262 (6%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 110
N+ I+S K G+ D+A K F ++ D VT+ ++IG K R + + +F +
Sbjct: 242 NVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 301
Query: 111 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVK---LNYILSAALVDMYAKCGR 167
P + + +++ G G A + L+ +R K + I ++ K G+
Sbjct: 302 NRRVPCTYAYNTMIMGYGSAGKFDEA---YSLLERQRAKGSIPSVIAYNCILTCLRKMGK 358
Query: 168 IDVSKQVFDTVARD---HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGI 224
+D + +VF+ + +D ++S +N +I+ L G A + M+ + P+ T +
Sbjct: 359 VDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM 418
Query: 225 LKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---P 281
+ ++E F M + + P + +++D LG+ G +++A + + M
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYK-VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 282 VEPDVVIWRALLSACRIHGKKE 303
+ +++ +L+ HG+KE
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKE 499
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 137/329 (41%), Gaps = 42/329 (12%)
Query: 36 HQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGG 91
++P + H+F+ ++ F+K G D A + D+M D+V +N I
Sbjct: 199 YEPTV--HLFTTLIRGFAKE---------GRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 92 YVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA-------KWVHGLML 144
+ K + + F + + ++PD T+ S++ G LC A + L
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMI------GVLCKANRLDEAVEMFEHLEK 301
Query: 145 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV----ARDHVSVWNAMINGLAVHGLAL 200
+RV Y + ++ Y G+ D + + + + V +N ++ L G
Sbjct: 302 NRRVPCTYAYNTMIMG-YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD 360
Query: 201 DAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTM 260
+A+ VF M+ ++ P+ T+ ++ G ++ E + MQ L P + M
Sbjct: 361 EALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF-PNVRTVNIM 418
Query: 261 VDLLGRAGNLEEACNMIKAMPVE---PDVVIWRALLSACRIHGKKELAEFAIANISRLES 317
VD L ++ L+EAC M + M + PD + + +L+ GK + A ++
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL---GKVGRVDDAYKVYEKMLD 475
Query: 318 GDFVLLSNMYCSL-KNWHNAERVRNMMKI 345
D S +Y SL KN+ N R + KI
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 139/302 (46%), Gaps = 16/302 (5%)
Query: 18 YATYPSLVAALISTYARCHQ--PHIAHHVFSRVMDT--FSKNLVIESLMKAGECDIARKV 73
+ +Y ++ L+S CH+ ++ + + SR + F+ +V+++ E D A +
Sbjct: 182 FKSYNVVLEILVS--GNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 74 FDKMP----VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
M V + V + TLI K R + L+L M PD TF V+ G +
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 189
+ A + ML + + I L++ K GR+D +K +F + + + ++N +
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTL 359
Query: 190 INGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 248
I+G HG DA AV S M ++PD T+ ++ GLV E + M+N+
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 249 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSA-CRIHGKKEL 304
+P + Y +VD + G ++EA N++ M ++P+ V + L+SA C+ H E
Sbjct: 420 -CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 305 AE 306
E
Sbjct: 479 VE 480
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 124/260 (47%), Gaps = 20/260 (7%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLF 105
+ +S ++++ K G+ D A V ++M + V +N LI + K R + + +F
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
R M +PD +TF S+++G + + +A W+ M+ + V N + L++ + +
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRR 542
Query: 166 GRID-----VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSIT 220
G I V++ VF D ++ +N++I GL G A ++F +M + P +I+
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEIT-YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 221 FVGILKACSHCGLVNEGREHFNIMQNRFLIQ---PQLEHYGTMVDLLGRAGNLEEACNMI 277
++ G+V E E Q +++ P + + ++++ L RAG +E+ M
Sbjct: 602 CNILINGLCRSGMVEEAVE----FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF 657
Query: 278 KAMPVE---PDVVIWRALLS 294
+ + E PD V + L+S
Sbjct: 658 RKLQAEGIPPDTVTFNTLMS 677
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 140/330 (42%), Gaps = 55/330 (16%)
Query: 40 IAHHVFSRVMDT------FSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLI 89
A +VF ++++ F+ N++I AG D+A +FDKM + +VVT+NTLI
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247
Query: 90 GGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVK 149
GY K + DG +L R M +EP+ ++ V+ G R G + +V M +
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Query: 150 LNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM 209
L+ + +N +I G G A+ + + M
Sbjct: 308 LDEV-------------------------------TYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 210 EVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGN 269
+ P IT+ ++ + G +N E + M+ R L P Y T+VD + G
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC-PNERTYTTLVDGFSQKGY 395
Query: 270 LEEACNMIKAMP---VEPDVVIWRALLSACRIHGKKELAEFAIANISRLE----SGDFVL 322
+ EA +++ M P VV + AL++ + GK E AIA + ++ S D V
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK---MEDAIAVLEDMKEKGLSPDVVS 452
Query: 323 LSNM---YCSLKNWHNAERVRNMMKIGGVR 349
S + +C + A RV+ M G++
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 119/269 (44%), Gaps = 30/269 (11%)
Query: 41 AHHVFSRVMDT-FSKNLVIESLMKAGEC-----DIARKVFDKMPVR----DVVTWNTLIG 90
A+ V + D FS ++V + + G C + A V + M + DVV+++T++
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 91 GYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKL 150
G+ ++ + LR+ R M+ ++PD T++S++ G A ++ ML +
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Query: 151 NYILSAALVDMYAKCGRIDVSKQVFDTVARD----HVSVWNAMINGLAVHGLALDAIAVF 206
+ AL++ Y G ++ + Q+ + + V ++ +INGL +A +
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Query: 207 SRMEVENVLPDSITFVGILKACSHC---------------GLVNEGREHFNIMQNRFLIQ 251
++ E +P +T+ +++ CS+ G++ E + F M + +
Sbjct: 579 LKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH-K 637
Query: 252 PQLEHYGTMVDLLGRAGNLEEACNMIKAM 280
P Y M+ RAG++ +A + K M
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 118/234 (50%), Gaps = 9/234 (3%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLF 105
D FS N +++++ K G+ D+A ++ +MPV+ +VV+++T+I G+ K RF + L LF
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
M + D ++ ++++ ++G A + M +K + + AL+ Y K
Sbjct: 433 GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQ 492
Query: 166 GRIDVSKQVFDTVARDHV----SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
G+ D K+VF + R+HV ++ +I+G + GL +A+ +F + + D + +
Sbjct: 493 GKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLY 552
Query: 222 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACN 275
++ A GLV + M I P + Y +++D GR+ ++ + +
Sbjct: 553 SALIDALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 21/311 (6%)
Query: 4 TTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMD------TFSKNLV 57
T A + GY +ALIS Y R A VF+ + + + N V
Sbjct: 250 TIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAV 309
Query: 58 IESLMKAG-ECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 112
I++ K G E K FD+M D +T+N+L+ + + LF M +
Sbjct: 310 IDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR 369
Query: 113 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 172
+E D F++ +++ + G + A + M KR+ N + + ++D +AK GR D +
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEAL 429
Query: 173 QVFDT-----VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 227
+F +A D VS +N +++ G + +A+ + M + D +T+ +L
Sbjct: 430 NLFGEMRYLGIALDRVS-YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG 488
Query: 228 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM---IKAMPVEP 284
G +E ++ F M+ ++ P L Y T++D + G +EA + K+ +
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHVL-PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRA 547
Query: 285 DVVIWRALLSA 295
DVV++ AL+ A
Sbjct: 548 DVVLYSALIDA 558
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 125/293 (42%), Gaps = 48/293 (16%)
Query: 24 LVAALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKVFDKM 77
L +A+IST R + IA +F ++ + +I + ++G + A VF+ M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 78 PV----RDVVTWNTLIGGYVKN-VRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGA 132
++VT+N +I K + F + F M V+PD TF S++ C+R G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 133 LCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMING 192
A+ + M +R++ + L+D K G++D+
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDL---------------------- 392
Query: 193 LAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL-IQ 251
A + ++M V+ ++P+ +++ ++ + G +E F M R+L I
Sbjct: 393 ---------AFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM--RYLGIA 441
Query: 252 PQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSACRIHGK 301
Y T++ + + G EEA ++++ M ++ DVV + ALL GK
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGK 494
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 145 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV----ARDHVSVWNAMINGLAVHGLAL 200
E+R L++A++ + G++ ++K++F+T + V ++A+I+ GL
Sbjct: 226 ERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHE 285
Query: 201 DAIAVFSRMEVENVLPDSITFVGILKACSHCGL-VNEGREHFNIMQNRFLIQPQLEHYGT 259
+AI+VF+ M+ + P+ +T+ ++ AC G+ + + F+ MQ R +QP + +
Sbjct: 286 EAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ-RNGVQPDRITFNS 344
Query: 260 MVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSACRIHGKKELA 305
++ + R G E A N+ M +E DV + LL A G+ +LA
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 96/247 (38%), Gaps = 64/247 (25%)
Query: 49 MDTFSKNLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRL 104
+D S N ++ K G + A + +M +DVVT+N L+GGY K ++ + ++
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Query: 105 FRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK 164
F M V P+ T+++++ G ++ G A + ++ + +L +AL+D K
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Query: 165 CGRIDVSKQVFDTVARDHVS----VWNAMING------------------LAVHGLALDA 202
G + + + D + ++ +S +N++I+ L AL A
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSA 621
Query: 203 IA--------------------------------------VFSRMEVENVLPDSITFVGI 224
+ VF +M + P+ +TF I
Sbjct: 622 LTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAI 681
Query: 225 LKACSHC 231
L ACS C
Sbjct: 682 LNACSRC 688
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 120/244 (49%), Gaps = 10/244 (4%)
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
++ +K+ D D+VT N ++ Y ++ L F M A+V PD TF ++
Sbjct: 102 EVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCL 161
Query: 128 ARLGALCNAKWVHGLMLEKRV--KLNYILSAALVDMYAKCGRIDVSKQVFDTVA----RD 181
++LG A + M EKR + + + +++ +Y+ G I+ + VF+ + +
Sbjct: 162 SKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 221
Query: 182 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 241
++ +NA++ AVHG++ A++V ++ ++PD +++ +L + + +E F
Sbjct: 222 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 281
Query: 242 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSACRI 298
+M + +P + Y ++D G G L EA + + M ++P+VV LL+AC
Sbjct: 282 -LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 340
Query: 299 HGKK 302
KK
Sbjct: 341 SKKK 344
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 116/289 (40%), Gaps = 35/289 (12%)
Query: 22 PSLVA--ALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPV 79
P +V+ L+++Y R QP A VF LM E + P
Sbjct: 256 PDVVSYTCLLNSYGRSRQPGKAKEVF---------------LMMRKE--------RRKP- 291
Query: 80 RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWV 139
+VVT+N LI Y N + + +FR M ++P+ + +++ C+R N V
Sbjct: 292 -NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTV 350
Query: 140 HGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS----VWNAMINGLAV 195
+ + LN + + Y ++ + ++ ++ + V + +I+G
Sbjct: 351 LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 410
Query: 196 HGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLE 255
+AI+ ME ++ + +L A S G V E FN M+ +P +
Sbjct: 411 MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG-CEPDVI 469
Query: 256 HYGTMVDLLGRAGNLEEACNM---IKAMPVEPDVVIWRALLSACRIHGK 301
Y +M+ + +AC + ++A +EPD + AL+ A G+
Sbjct: 470 AYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQ 518
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 129/329 (39%), Gaps = 48/329 (14%)
Query: 68 DIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 123
D AR +F +M D T++ LI + + ++ + L ML A + P T+ ++
Sbjct: 28 DQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNL 87
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
+ C G W L +V K++ D +
Sbjct: 88 INACGSSG-----NWREAL--------------------------EVCKKMTDNGVGPDL 116
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 243
N +++ A++ F M+ V PD+ TF I+ S G ++ + FN
Sbjct: 117 VTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNS 176
Query: 244 M-QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE---PDVVIWRALLSACRIH 299
M + R +P + + +++ L G +E + +AM E P++V + AL+ A +H
Sbjct: 177 MREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 236
Query: 300 GKKELAEFAIANISR----LESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKS 355
G A + +I + + + L N Y + A+ V MM RK+R K
Sbjct: 237 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM-----RKERRKP 291
Query: 356 WIELGDSIHQFNAADQSHAEMKAIHRVLE 384
+ +++ ++ AE I R +E
Sbjct: 292 NVVTYNALIDAYGSNGFLAEAVEIFRQME 320
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 139/305 (45%), Gaps = 24/305 (7%)
Query: 22 PSLVAALISTYARC--HQPHIAHHVFSRVMDT-FSKNLVIESLMKAGECDIAR-----KV 73
P L I + C QP A ++M F +LV + + G C R +
Sbjct: 116 PLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIAL 175
Query: 74 FDKM------PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
FD++ P +VVT+ TLI KN + LF M + P+ T+ ++VTG
Sbjct: 176 FDQILGMGFKP--NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGL 233
Query: 128 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR----DHV 183
+G +A W+ M+++R++ N I AL+D + K G++ +K++++ + + V
Sbjct: 234 CEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV 293
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 243
+ ++INGL ++GL +A +F ME P+ + + ++ V +G + F
Sbjct: 294 FTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYE 353
Query: 244 MQNRFLIQPQLEHYGTMVD---LLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
M + ++ + Y ++ L+GR +E N + + PD+ + LL +G
Sbjct: 354 MSQKGVVANTIT-YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNG 412
Query: 301 KKELA 305
K E A
Sbjct: 413 KVEKA 417
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 135/299 (45%), Gaps = 27/299 (9%)
Query: 19 ATYPSLVAALISTYARCHQPHIAHHV--FSRVMDTFSK-NLVIESLMKAGECDIAR---- 71
TY +L+ L C H+ H V F+++ S+ N+V + + G C+I R
Sbjct: 189 VTYTTLIRCL------CKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 72 --KVFDKMPVR---DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTG 126
+ D M R +V+T+ LI +VK + ++ L+ M+ V PD FT+ S++ G
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 127 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS-- 184
G L A+ + LM N ++ L+ + K R++ ++F +++ V
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 185 --VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
+ +I G + G A VF++M PD T+ +L G V + F
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSA-CR 297
M+ R + + Y ++ + + G +E+A ++ ++ ++P+V+ + ++S CR
Sbjct: 423 YMRKREM-DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 100/239 (41%), Gaps = 44/239 (18%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMP----VRDVVTWNTLIGGYVKNVRFLDGLRLF 105
D F+ +I L G D AR++F M + V + TLI G+ K+ R DG+++F
Sbjct: 292 DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF 351
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
M V + T+ ++ G Y
Sbjct: 352 YEMSQKGVVANTITYTVLIQG-----------------------------------YCLV 376
Query: 166 GRIDVSKQVFDTV----ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
GR DV+++VF+ + A + +N +++GL +G A+ +F M + + +T+
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY 436
Query: 222 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 280
I++ G V + + F + ++ + +P + Y TM+ R G + EA ++ K M
Sbjct: 437 TIIIQGMCKLGKVEDAFDLFCSLFSKGM-KPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 110/276 (39%), Gaps = 50/276 (18%)
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
D+ ++ P+ ++ + L+ K R+ + LF M + P T ++V C
Sbjct: 69 DLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCT-CNIVMHC 127
Query: 128 ARLGAL-CNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-------- 178
L + C A G M++ + + + +L++ Y RI+ + +FD +
Sbjct: 128 VCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPN 187
Query: 179 -------------------------------ARDHVSVWNAMINGLAVHGLALDAIAVFS 207
+R +V +NA++ GL G DA +
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLR 247
Query: 208 RMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRA 267
M + P+ ITF ++ A G + E +E +N+M + + P + YG++++ L
Sbjct: 248 DMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI-QMSVYPDVFTYGSLINGLCMY 306
Query: 268 GNLEEACNMIKAMP---VEPDVVIWRALLSACRIHG 300
G L+EA M M P+ VI+ L IHG
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTL-----IHG 337
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 76/178 (42%), Gaps = 35/178 (19%)
Query: 48 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLR 103
V +T + ++I+ G D+A++VF++M R D+ T+N L+ G N + L
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALM 419
Query: 104 LFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYA 163
+F M E++ + T+ ++ G +LG + +A
Sbjct: 420 IFEYMRKREMDINIVTYTIIIQGMCKLGKVEDA--------------------------- 452
Query: 164 KCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
D+ +F + +V + MI+G GL +A ++F +M+ + LP+ +
Sbjct: 453 ----FDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 130/274 (47%), Gaps = 15/274 (5%)
Query: 57 VIESLMKAGECDIARKVFDKMP---VR-DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 112
+I+SL K G + A +FD+M +R DVV + +L+ G + R+ D L RGM +
Sbjct: 183 IIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK 242
Query: 113 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 172
++PD TF +++ + G +A+ ++ M+ + N +L++ + G +D ++
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEAR 302
Query: 173 QVFDTVARD----HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 228
Q+F + V + ++ING DA+ +F M + + ++IT+ +++
Sbjct: 303 QMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Query: 229 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP------V 282
G N +E F+ M +R + P + Y ++ L G +++A + + M V
Sbjct: 363 GQVGKPNVAQEVFSHMVSRG-VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGV 421
Query: 283 EPDVVIWRALLSACRIHGKKELAEFAIANISRLE 316
P++ + LL +GK E A ++ + E
Sbjct: 422 APNIWTYNVLLHGLCYNGKLEKALMVFEDMRKRE 455
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/316 (18%), Positives = 134/316 (42%), Gaps = 53/316 (16%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKM------PVRDVVTWNTLIGGYVKNVRFLDGLR 103
D ++ NL++ ++ + +A KM P D+VT+ +LI G+ R + +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEP--DIVTFTSLINGFCLGNRMEEAMS 163
Query: 104 LFRGMLSAEVEPDGFTFASVVTGCARLG-----------------------------ALC 134
+ M+ ++PD + +++ + G LC
Sbjct: 164 MVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLC 223
Query: 135 NA-KW------VHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR----DHV 183
N+ +W + G M ++++K + I AL+D + K G+ ++++++ + R ++
Sbjct: 224 NSGRWRDADSLLRG-MTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 243
+ ++ING + G +A +F ME + PD + + ++ C V++ + F
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 244 MQNRFLIQPQLEHYGTMVDLLGRAGN---LEEACNMIKAMPVEPDVVIWRALLSACRIHG 300
M + L + Y T++ G+ G +E + + + V P++ + LL +G
Sbjct: 343 MSQKGLTGNTIT-YTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 301 KKELAEFAIANISRLE 316
K + A ++ + E
Sbjct: 402 KVKKALMIFEDMQKRE 417
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 107/243 (44%), Gaps = 14/243 (5%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLF 105
+ F+ +I G D AR++F M + DVV + +LI G+ K + D +++F
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
M + + T+ +++ G ++G A+ V M+ + V N L+
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Query: 166 GRI--------DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPD 217
G++ D+ K+ D VA ++ +N +++GL +G A+ VF M +
Sbjct: 401 GKVKKALMIFEDMQKREMDGVA-PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIG 459
Query: 218 SITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMI 277
IT+ I++ G V F + ++ ++P + Y TM+ L R G EA +
Sbjct: 460 IITYTIIIQGMCKAGKVKNAVNLFCSLPSKG-VKPNVVTYTTMISGLFREGLKHEAHVLF 518
Query: 278 KAM 280
+ M
Sbjct: 519 RKM 521
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 120/244 (49%), Gaps = 10/244 (4%)
Query: 68 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
++ +K+ D D+VT N ++ Y ++ L F M A+V PD TF ++
Sbjct: 234 EVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCL 293
Query: 128 ARLGALCNAKWVHGLMLEKRV--KLNYILSAALVDMYAKCGRIDVSKQVFDTVA----RD 181
++LG A + M EKR + + + +++ +Y+ G I+ + VF+ + +
Sbjct: 294 SKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 353
Query: 182 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 241
++ +NA++ AVHG++ A++V ++ ++PD +++ +L + + +E F
Sbjct: 354 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Query: 242 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSACRI 298
+M + +P + Y ++D G G L EA + + M ++P+VV LL+AC
Sbjct: 414 -LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 472
Query: 299 HGKK 302
KK
Sbjct: 473 SKKK 476
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 116/289 (40%), Gaps = 35/289 (12%)
Query: 22 PSLVA--ALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPV 79
P +V+ L+++Y R QP A VF LM E + P
Sbjct: 388 PDVVSYTCLLNSYGRSRQPGKAKEVF---------------LMMRKE--------RRKP- 423
Query: 80 RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWV 139
+VVT+N LI Y N + + +FR M ++P+ + +++ C+R N V
Sbjct: 424 -NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTV 482
Query: 140 HGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS----VWNAMINGLAV 195
+ + LN + + Y ++ + ++ ++ + V + +I+G
Sbjct: 483 LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 542
Query: 196 HGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLE 255
+AI+ ME ++ + +L A S G V E FN M+ +P +
Sbjct: 543 MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG-CEPDVI 601
Query: 256 HYGTMVDLLGRAGNLEEACNM---IKAMPVEPDVVIWRALLSACRIHGK 301
Y +M+ + +AC + ++A +EPD + AL+ A G+
Sbjct: 602 AYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQ 650
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 129/329 (39%), Gaps = 48/329 (14%)
Query: 68 DIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 123
D AR +F +M D T++ LI + + ++ + L ML A + P T+ ++
Sbjct: 160 DQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNL 219
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 183
+ C G W L +V K++ D +
Sbjct: 220 INACGSSG-----NWREAL--------------------------EVCKKMTDNGVGPDL 248
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 243
N +++ A++ F M+ V PD+ TF I+ S G ++ + FN
Sbjct: 249 VTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNS 308
Query: 244 M-QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE---PDVVIWRALLSACRIH 299
M + R +P + + +++ L G +E + +AM E P++V + AL+ A +H
Sbjct: 309 MREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 368
Query: 300 GKKELAEFAIANISR----LESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKS 355
G A + +I + + + L N Y + A+ V MM RK+R K
Sbjct: 369 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM-----RKERRKP 423
Query: 356 WIELGDSIHQFNAADQSHAEMKAIHRVLE 384
+ +++ ++ AE I R +E
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQME 452
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 8/245 (3%)
Query: 79 VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKW 138
V +VV +NT+I G KN + L +F M + D T+ ++++G + G +A
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 139 VHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR----DHVSVWNAMINGLA 194
+ M+++++ N I AL+D + K G + ++ ++ + R +V +N++ING
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 195 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQL 254
+HG DA +F M + PD +T+ ++ V +G + F M + L+
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 255 EHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSACRIHGKKELAEFAIAN 311
Y T++ +AG L A + M V PD+V + LL +GK E A + +
Sbjct: 361 T-YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419
Query: 312 ISRLE 316
+ + E
Sbjct: 420 LQKSE 424
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 128/271 (47%), Gaps = 13/271 (4%)
Query: 45 FSRVMDTFSKNLVIESLMKAGECDIARKVF---DKMPVR-DVVTWNTLIGGYVKNVRFLD 100
F V + N VI L K + + A +VF +K +R D VT+NTLI G + R+ D
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 101 GLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVD 160
RL R M+ +++P+ F +++ + G L A+ ++ M+ + V N +L++
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 161 MYAKCGRIDVSKQVFDTVARD----HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLP 216
+ G + +K +FD + V +N +I G D + +F M + ++
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 217 DSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM 276
D+ T+ ++ G +N ++ FN M + + P + Y ++D L G +E+A M
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVD-CGVSPDIVTYNILLDCLCNNGKIEKALVM 416
Query: 277 IKAM---PVEPDVVIWRALLSA-CRIHGKKE 303
++ + ++ D++ + ++ CR KE
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 447
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 8/200 (4%)
Query: 46 SRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDG 101
S V + F+ N +I G A+ +FD M + DVVT+NTLI G+ K+ R DG
Sbjct: 284 SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG 343
Query: 102 LRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDM 161
++LF M + D FT+ +++ G + G L A+ V M++ V + + L+D
Sbjct: 344 MKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC 403
Query: 162 YAKCGRIDVSKQVFDTVARDHVSV----WNAMINGLAVHGLALDAIAVFSRMEVENVLPD 217
G+I+ + + + + + + V +N +I GL +A +F + + V PD
Sbjct: 404 LCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPD 463
Query: 218 SITFVGILKACSHCGLVNEG 237
+I ++ ++ GL E
Sbjct: 464 AIAYITMISGLCRKGLQREA 483
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 121/235 (51%), Gaps = 12/235 (5%)
Query: 81 DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVH 140
+VVT+N LI +VK + ++ +L+ M+ ++PD FT++S++ G L AK +
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 141 GLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGL-- 198
LM+ K N + L++ + K RID ++F +++ + V N + +HG
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL-VGNTVTYTTLIHGFFQ 447
Query: 199 ---ALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLE 255
+A VF +M + V P+ +T+ +L G + + F +Q R ++P +
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ-RSKMEPTIY 506
Query: 256 HYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSA-CRIHGKKELAE 306
Y M++ + +AG +E+ ++ ++ V+PDV+I+ ++S CR G KE A+
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR-KGLKEEAD 560
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 128/274 (46%), Gaps = 17/274 (6%)
Query: 20 TYPSLVAALI-----STYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVF 74
TY SL++ L S +R I + V+ TF N +I++ +K G+ A K++
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVV-TF--NALIDAFVKEGKLVEAEKLY 353
Query: 75 DKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARL 130
D+M R D+ T+++LI G+ + R + +F M+S + P+ T+ +++ G +
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Query: 131 GALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD----HVSVW 186
+ + M ++ + N + L+ + + D ++ VF + D ++ +
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 187 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 246
N +++GL +G A+ VF ++ + P T+ +++ G V +G + F +
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 533
Query: 247 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 280
+ ++P + Y TM+ R G EEA + + M
Sbjct: 534 KG-VKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 154/355 (43%), Gaps = 29/355 (8%)
Query: 52 FSKNLVIESLMKAGECDIARKVFDKM------PVRDVVTWNTLIGGYVKNVRFLDGLRLF 105
++ N++I + + +A + KM P +VT ++L+ GY R D + L
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVALV 178
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
M+ PD TF +++ G A + M+++ + N + +V+ K
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 166 GRIDVSKQVFDTVA----RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
G ID++ + + + +V +++ +I+ L + DA+ +F+ ME + V P+ IT+
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 222 VGILKA-CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 280
++ C++ + R ++++ + I P + + ++D + G L EA + M
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERK--INPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 281 ---PVEPDVVIWRALLSACRIHGK----KELAEFAIANISRLESGDFVLLSNMYCSLKNW 333
++PD+ + +L++ +H + K + E I+ + L N +C K
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 334 -HNAERVRNMMKIGGVRKKRGKSWIELGDSIHQ-FNAADQSHAEMKAIHRVLEGL 386
E R M + G V + + IH F A D +A+M V +G+
Sbjct: 417 DEGVELFREMSQRGLV-----GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 45/246 (18%)
Query: 20 TYPSLVAALISTYARCHQPHIAHHVFSRVMDT--FSKNLVIESLMKAGECDIARKVFDKM 77
T+ +L+ A + + + R +D F+ + +I D A+ +F+ M
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391
Query: 78 PVRD----VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGAL 133
+D VVT+NTLI G+ K R +G+ LFR M + + T+ +++ G +
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Query: 134 CNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH----------- 182
NA+ V M+ V N + L+D K G+++ + VF+ + R
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 183 ----------------------------VSVWNAMINGLAVHGLALDAIAVFSRMEVENV 214
V ++N MI+G GL +A A+F +M +
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGP 571
Query: 215 LPDSIT 220
LPDS T
Sbjct: 572 LPDSGT 577
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 130/265 (49%), Gaps = 16/265 (6%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 110
N +I L G A ++ M R +VVT++ LI +VK + ++ +L+ M+
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 111 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 170
++PD FT++S++ G L AK + LM+ K N + L+ + K R+D
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 171 SKQVFDTVARDHVSVWNAMINGLAVHGL-----ALDAIAVFSRMEVENVLPDSITFVGIL 225
++F +++ + V N + +HG +A VF +M + VLPD +T+ +L
Sbjct: 415 GMELFREMSQRGL-VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 226 KACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---V 282
+ G V F +Q R ++P + Y M++ + +AG +E+ ++ ++ V
Sbjct: 474 DGLCNNGKVETALVVFEYLQ-RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532
Query: 283 EPDVVIWRALLSA-CRIHGKKELAE 306
+P+VV + ++S CR G KE A+
Sbjct: 533 KPNVVTYTTMMSGFCR-KGLKEEAD 556
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 128/276 (46%), Gaps = 12/276 (4%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLF 105
D + +V+ L K G+ D+A + KM VV +NT+I D L LF
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
M + + P+ T+ S++ G +A + M+E+++ N + +AL+D + K
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 166 GRIDVSKQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
G++ +++++D + + + ++++ING +H +A +F M ++ P+ +T+
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 222 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM- 280
++K V+EG E F M R L+ + Y T++ +A + A + K M
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT-YTTLIHGFFQARECDNAQIVFKQMV 458
Query: 281 --PVEPDVVIWRALLSACRIHGKKELAEFAIANISR 314
V PD++ + LL +GK E A + R
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 143/307 (46%), Gaps = 24/307 (7%)
Query: 21 YPSLV--AALISTYARCHQPHIAHHVFSRVMDT------FSKNLVIESLMKAGECDIARK 72
+PS+V + L+S A+ ++ + + ++ + ++ +++I + + +A
Sbjct: 78 FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALA 137
Query: 73 VFDKM------PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTG 126
V KM P D+VT N+L+ G+ R D + L M+ +PD FTF +++ G
Sbjct: 138 VLAKMMKLGYEP--DIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHG 195
Query: 127 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS-- 184
R A + M+ K + + + +V+ K G ID++ + + + +
Sbjct: 196 LFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
Query: 185 --VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
++N +I+ L + DA+ +F+ M+ + + P+ +T+ +++ + G ++ +
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 243 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSACRIH 299
M R I P + + ++D + G L EA + M ++PD+ + +L++ +H
Sbjct: 316 DMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 300 GKKELAE 306
+ + A+
Sbjct: 375 DRLDEAK 381
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 139/305 (45%), Gaps = 32/305 (10%)
Query: 20 TYPSLVAALI-----STYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVF 74
TY SL+ L S +R I + V+ TFS +I++ +K G+ A K++
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV-TFSA--LIDAFVKEGKLVEAEKLY 349
Query: 75 DKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARL 130
D+M R D+ T+++LI G+ + R + +F M+S + P+ T+ +++ G
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG---- 405
Query: 131 GALCNAKWV-HGL-----MLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD--- 181
C AK V G+ M ++ + N + L+ + + D ++ VF + D
Sbjct: 406 --FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Query: 182 -HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREH 240
+ ++ +++GL +G A+ VF ++ + PD T+ +++ G V +G +
Sbjct: 464 PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 241 FNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE---PDVVIWRALLSACR 297
F + + ++P + Y TM+ R G EEA + + M E PD + L+ A
Sbjct: 524 FCSLSLKG-VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHL 582
Query: 298 IHGKK 302
G K
Sbjct: 583 RDGDK 587
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 132/283 (46%), Gaps = 42/283 (14%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 110
N +I+SL K ++A +F +M + +VVT+N+LI R+ D RL ML
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 111 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 170
++ P+ TF +++ + G L A+ +H M+++ + + I L++ + R+D
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 171 SKQVFD-TVARD---HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 226
+KQ+F V++D ++ +N +ING D + +F M ++ +++T+ I++
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 227 ACSHCGLVNEGREHFNIM-QNR-----------------------------FLIQPQLEH 256
G + + F M NR +L + ++E
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 257 ----YGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 295
Y TM++ + +AG + EA ++ ++ ++PDVV + ++S
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISG 544
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 110/239 (46%), Gaps = 12/239 (5%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRD----VVTWNTLIGGYVKNVRFLDGLRLF 105
DT + NL+I D A+++F M +D + T+NTLI G+ K R DG+ LF
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
R M + + T+ +++ G + G +A+ V M+ RV + + + L+
Sbjct: 422 REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSY 481
Query: 166 GRIDVSKQVFDTVARD----HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
G++D + +F + + ++ ++N MI G+ G +A +F + ++ PD +T+
Sbjct: 482 GKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTY 538
Query: 222 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 280
++ L+ E + F M+ + P Y T++ R + + +IK M
Sbjct: 539 NTMISGLCSKRLLQEADDLFRKMKEDGTL-PNSGTYNTLIRANLRDCDRAASAELIKEM 596
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 133/302 (44%), Gaps = 28/302 (9%)
Query: 14 IVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDT-FSKNLVIESLMKAGECDIAR- 71
I H TY + I+ + R Q +A V +++M + ++V S + G C R
Sbjct: 114 ISHDLYTY----SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 72 ----KVFDKM------PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 121
+ D+M P D T+ TLI G + + + + L M+ +PD T+
Sbjct: 170 SDAVALVDQMVEMGYKP--DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 122 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-- 179
+VV G + G + A + M R+K N ++ ++D K ++V+ +F +
Sbjct: 228 TVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK 287
Query: 180 --RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG-LVNE 236
R +V +N++IN L +G DA + S M + + P+ +TF ++ A G LV
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 237 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE---PDVVIWRALL 293
+ H ++Q I P Y +++ L+EA M K M + P++ + L+
Sbjct: 348 EKLHEEMIQRS--IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Query: 294 SA 295
+
Sbjct: 406 NG 407
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 135/305 (44%), Gaps = 50/305 (16%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLF 105
D + VI L K GE D+A + +KM DVV +NT+I G K D LF
Sbjct: 214 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLF 273
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
M + ++PD FT+ +++ G +A + MLEK + + + AL+D + K
Sbjct: 274 NKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKE 333
Query: 166 GRIDVSKQVFDTVARDH-----VSVWNAMINGLA-------------------------- 194
G++ +++++D + + V +N +I G
Sbjct: 334 GKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 393
Query: 195 ----VHGL-----ALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 245
+HG +A VF +M + V PD +T+ +L + G V F MQ
Sbjct: 394 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQ 453
Query: 246 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSA-CRIHGK 301
R + + + Y TM++ L +AG +E+ ++ ++ V+P+VV + ++S CR G
Sbjct: 454 KRDM-KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR-KGL 511
Query: 302 KELAE 306
KE A+
Sbjct: 512 KEEAD 516
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 95/195 (48%), Gaps = 11/195 (5%)
Query: 41 AHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNV 96
+ H F D + N +I+ K + +VF +M R + VT+ TLI G+ +
Sbjct: 349 SKHCFP---DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQAR 405
Query: 97 RFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSA 156
+ +F+ M+S V PD T+ ++ G G + A V M ++ +KL+ +
Sbjct: 406 DCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYT 465
Query: 157 ALVDMYAKCGRIDVSKQVFDTVA----RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE 212
+++ K G+++ +F +++ + +V + M++G GL +A A+F M+ +
Sbjct: 466 TMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED 525
Query: 213 NVLPDSITFVGILKA 227
LP+S T+ +++A
Sbjct: 526 GPLPNSGTYNTLIRA 540
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 103/231 (44%), Gaps = 8/231 (3%)
Query: 78 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 137
P +V ++ L+ K +F + L M + + + +T++ + R L A
Sbjct: 71 PFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLAL 130
Query: 138 WVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA----RDHVSVWNAMINGL 193
+ G M++ + + +L++ + RI + + D + + + +++GL
Sbjct: 131 AILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL 190
Query: 194 AVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQ 253
H A +A+A+ RM V+ PD +T+ ++ G + N M+ + I+
Sbjct: 191 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME-KGKIEAD 249
Query: 254 LEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSACRIHGK 301
+ Y T++D L + ++++A ++ M ++PDV + L+S +G+
Sbjct: 250 VVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGR 300
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 138/304 (45%), Gaps = 17/304 (5%)
Query: 28 LISTYARCHQPHIAHHVFSRVMD-TFSKNLVIESLMKAGECDIARKVFD---------KM 77
+I+ RC + IA V ++M + ++V S + G C +VFD +M
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQ-GNRVFDAIDLVSKMEEM 168
Query: 78 PVR-DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA 136
R DVV +NT+I G K D + LF M V D T+ S+V G G +A
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 137 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR----DHVSVWNAMING 192
+ M+ + + N I A++D++ K G+ + ++++ + R V +N++ING
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 193 LAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQP 252
L +HG +A + M + LPD +T+ ++ V+EG + F M R L+
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 253 QLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANI 312
+ Y T++ +AG + A + M P++ + LL ++ + E A N+
Sbjct: 349 TIT-YNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENM 407
Query: 313 SRLE 316
+ E
Sbjct: 408 QKSE 411
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 121/255 (47%), Gaps = 14/255 (5%)
Query: 52 FSKNLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLFRG 107
FSK V+ + K+ D+ +F M V D+ ++N +I + RF+ L +
Sbjct: 72 FSK--VLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGK 129
Query: 108 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 167
M+ EPD T +S++ G + + +A + M E + + ++ ++D K G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 168 IDVSKQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVG 223
++ + ++FD + RD V +N+++ GL G DA + M + +++P+ ITF
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 224 ILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE 283
++ G +E + + M R + P + Y ++++ L G ++EA M+ M +
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRR-CVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 284 ---PDVVIWRALLSA 295
PDVV + L++
Sbjct: 309 GCLPDVVTYNTLING 323
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVV----TWNTLIGGYVKNVRFLDGLRLF 105
D + N ++ L +G A ++ M +RD+V T+ +I +VK +F + ++L+
Sbjct: 208 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 267
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
M V+PD FT+ S++ G G + AK + LM+ K + + L++ + K
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 327
Query: 166 GRIDVSKQVFDTVAR-----DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSIT 220
R+D ++F +A+ D ++ +N +I G G A +FSRM+ P+ T
Sbjct: 328 KRVDEGTKLFREMAQRGLVGDTIT-YNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRT 383
Query: 221 FVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 280
+ +L V + F MQ + I+ + Y ++ + + GN+E+A ++ +++
Sbjct: 384 YSILLYGLCMNWRVEKALVLFENMQ-KSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 442
Query: 281 P---VEPDVVIWRALLSA-CR 297
++PDVV + ++S CR
Sbjct: 443 SCKGLKPDVVSYTTMISGFCR 463
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 147/317 (46%), Gaps = 25/317 (7%)
Query: 52 FSKNLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLFRG 107
++ N ++ L+ A D A +VF+ M D+VT+NT+I GY K + + R
Sbjct: 223 YTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRD 282
Query: 108 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 167
M + E D T+ +++ C + ++ M EK +++ + ++ K G+
Sbjct: 283 METRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGK 342
Query: 168 IDVSKQVFDTVARD----HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVG 223
++ VF+ + R +V+++ +I+G A G DAI + RM E PD +T+
Sbjct: 343 LNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSV 402
Query: 224 ILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE 283
++ G V E ++F+ + L + Y +++D LG+AG ++EA + + M +
Sbjct: 403 VVNGLCKNGRVEEALDYFHTCRFDGLAINSM-FYSSLIDGLGKAGRVDEAERLFEEMSEK 461
Query: 284 P---DVVIWRALLSACRIHGKKELAEFAIANISRLESGD---------FVLLSNMYCSLK 331
D + AL+ A H K + AIA R+E + +LLS M+ +
Sbjct: 462 GCTRDSYCYNALIDAFTKHRK---VDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHR 518
Query: 332 NWHNAERVRNMMKIGGV 348
N A ++ +MM G+
Sbjct: 519 N-EEALKLWDMMIDKGI 534
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 134/317 (42%), Gaps = 64/317 (20%)
Query: 39 HIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVK 94
+ H FS LVI L K G+ + VF+ M + +V + LI GY K
Sbjct: 324 QVPPHAFS---------LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAK 374
Query: 95 NVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA-KWVHGLMLEKRVKLNYI 153
+ D +RL M+ +PD T++ VV G + G + A + H + + +N +
Sbjct: 375 SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG-LAINSM 433
Query: 154 LSAALVDMYAKCGRIDVSKQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRM 209
++L+D K GR+D ++++F+ ++ + +NA+I+ H +AIA+F RM
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 493
Query: 210 EVENVLPDSITFVGILKACSHCGLVNEGREH-----FNIMQNRFL--------------- 249
E E ++ IL + G+ E R +++M ++ +
Sbjct: 494 EEEEGCDQTVYTYTILLS----GMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLC 549
Query: 250 ----------IQPQLEHYGT--------MVDLLGRAGNLEEACNMIKAMPVEPDVVIWR- 290
I +L G M++ L +AG ++EAC + + V R
Sbjct: 550 LSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRI 609
Query: 291 --ALLSACRIHGKKELA 305
+++A R GK +LA
Sbjct: 610 RTVMINALRKVGKADLA 626
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 131/302 (43%), Gaps = 19/302 (6%)
Query: 22 PSLVAALISTYARCHQPHIAHHVF--SRVMDTFSKNL-----VIESLMKAGECDIARKVF 74
P+ V+ ++ + +P IA F SR ++ NL +++ L A + D R V
Sbjct: 116 PNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVS 175
Query: 75 DKMPVRD----VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARL 130
++ + V N LI + K + L ++R M +EP +T+ ++ G
Sbjct: 176 SEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSA 235
Query: 131 GALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS-KQVFDTVARDHVS---VW 186
+ +A+ V +M R+K + + ++ Y K G+ + +++ D R H + +
Sbjct: 236 MFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITY 295
Query: 187 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 246
MI +A++ M+ + + F ++ G +NEG F M
Sbjct: 296 MTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMI- 354
Query: 247 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE---PDVVIWRALLSACRIHGKKE 303
R +P + Y ++D ++G++E+A ++ M E PDVV + +++ +G+ E
Sbjct: 355 RKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVE 414
Query: 304 LA 305
A
Sbjct: 415 EA 416
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 148/313 (47%), Gaps = 20/313 (6%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVK---NVRFLDGL 102
+ F+ N+VI +L K G+ + AR V + M V +VV++NTLI GY K N +
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 281
Query: 103 RLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMY 162
+ + M+ +V P+ TF ++ G + L + V ML++ VK N I +L++
Sbjct: 282 AVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGL 341
Query: 163 AKCGRIDVSKQVFDTV----ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDS 218
G+I + + D + + ++ +NA+ING + + +A+ +F ++ + +P +
Sbjct: 342 CNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTT 401
Query: 219 ITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIK 278
+ ++ A G +++G M+ R I P + Y ++ L R GN+E A +
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEME-REGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460
Query: 279 AMPVE--PDVVIWRALLSA-CRIHGKKELAEFAIANISRLESGDFVLLSNM----YCSLK 331
+ + PD+V + L+ CR G+ A + +S++ L N+ YC
Sbjct: 461 QLTSKGLPDLVTFHILMEGYCR-KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519
Query: 332 NWHNAERVRNMMK 344
N A +R M+
Sbjct: 520 NLKAATNMRTQME 532
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 101/220 (45%), Gaps = 18/220 (8%)
Query: 93 VKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNY 152
+K R D +++ M+ +++P+ FTF V+ + G + A+ V M N
Sbjct: 199 LKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNV 258
Query: 153 ILSAALVDMYAKCG------RID-VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAV 205
+ L+D Y K G + D V K++ + +++ +N +I+G ++ V
Sbjct: 259 VSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKV 318
Query: 206 FSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL---IQPQLEHYGTMVD 262
F M ++V P+ I++ ++ + G ++E M+++ + +QP L Y +++
Sbjct: 319 FKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS----MRDKMVSAGVQPNLITYNALIN 374
Query: 263 LLGRAGNLEEACNM---IKAMPVEPDVVIWRALLSA-CRI 298
+ L+EA +M +K P ++ L+ A C++
Sbjct: 375 GFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKL 414
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 126/288 (43%), Gaps = 19/288 (6%)
Query: 26 AALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIAR----KVFD 75
A LI Y + + IA + ++ D + ++I L+ +G D A K+ D
Sbjct: 384 APLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLID 443
Query: 76 KMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCN 135
+ D +N L+ G K RFL LF ML + PD + +A+++ G R G
Sbjct: 444 RGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDE 503
Query: 136 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS----VWNAMIN 191
A+ V L +EK VK++ + A++ + + G +D + + + +H+ ++ +I+
Sbjct: 504 ARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID 563
Query: 192 GLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQ 251
G AI +F ME P+ +T+ ++ G E F MQ R L+
Sbjct: 564 GYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLV- 622
Query: 252 PQLEHYGTMVDLLGR-AGNLEEACNMIKAMPVE---PDVVIWRALLSA 295
P + Y T++ L + + LE+A + M P+ V + LL
Sbjct: 623 PNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQG 670
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 121/296 (40%), Gaps = 55/296 (18%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVV----TWNTLIGGYVKNVRFLDGLRLF 105
D + N++I L K G+ ++A D+ + ++ ++ LI Y K+ + +L
Sbjct: 344 DVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLL 403
Query: 106 -----RG------------------------------MLSAEVEPDGFTFASVVTGCARL 130
RG ++ V PD + +++G +
Sbjct: 404 LQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT 463
Query: 131 GALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV----W 186
G AK + ML++ + + + A L+D + + G D +++VF V V
Sbjct: 464 GRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHH 523
Query: 187 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 246
NAMI G G+ +A+A +RM E+++PD T+ I+ G V + I
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID-----GYVKQQDMATAIKIF 578
Query: 247 RFL----IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE---PDVVIWRALLSA 295
R++ +P + Y ++++ G+ + A K M + P+VV + L+ +
Sbjct: 579 RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRS 634
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 147/343 (42%), Gaps = 72/343 (20%)
Query: 9 THAKL--IVHGYATYPSLVAAL-ISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAG 65
TH L ++H YA SL A+ I Y ++ V D + N ++ L+K+
Sbjct: 133 THEALSHVLHAYAESGSLSKAVEIYDYVV--------ELYDSVPDVIACNSLLSLLVKSR 184
Query: 66 ECDIARKVFDKMPVR---------------------------------------DVVTWN 86
ARKV+D+M R ++V +N
Sbjct: 185 RLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYN 244
Query: 87 TLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEK 146
T+IGGY K + +F+ + P TF +++ G + G + + + E+
Sbjct: 245 TIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKER 304
Query: 147 RVKLNYILSAALVDMYAKCG-RIDVSKQVFDTVARD---HVSVWNAMINGLAVHGLALDA 202
++++ ++D + G ++D ++ + +A D V+ +N +IN L G A
Sbjct: 305 GLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVA 364
Query: 203 IAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQ-------PQLE 255
+ + ++P+++++ +++A +C + +E+ + ++ L+Q P +
Sbjct: 365 VGFLDEASKKGLIPNNLSYAPLIQA--YC----KSKEY--DIASKLLLQMAERGCKPDIV 416
Query: 256 HYGTMVDLLGRAGNLEEACNM-IKAMP--VEPDVVIWRALLSA 295
YG ++ L +G++++A NM +K + V PD I+ L+S
Sbjct: 417 TYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSG 459
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 154/357 (43%), Gaps = 22/357 (6%)
Query: 13 LIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR------VMDTFSKNLVIESLMKAGE 66
+I G A+LI Y R + + V+ ++ V++ + +G+
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 67 CDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
D A + +M +VV + TLI +++N RF D +R+ + M + PD F + S
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 123 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS----KQVFDTV 178
++ G ++ + A+ M+E +K N A + Y + + K++ +
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 179 ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR 238
+ + +IN G ++A + + M + +L D+ T+ ++ V++
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 239 EHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE---PDVVIWRALLSA 295
E F M+ + I P + YG +++ + GN+++A ++ M E P+V+I+ LL
Sbjct: 613 EIFREMRGKG-IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 296 -CR---IHGKKELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGV 348
CR I KEL + + + + + YC + A R+ + MK+ G+
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 143/319 (44%), Gaps = 32/319 (10%)
Query: 26 AALISTYARCHQPHIAHHVFSRVMDT-FSKNLVIESLM-----KAGECDIARKVFDKMPV 79
LI+ +++ A +F +++ + N++I +++ ++GE + A+++ D+M V
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 80 R----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCN 135
+ + VT+ T+I GY K+ + RLF M + PD F + ++V GC RL +
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750
Query: 136 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV--------FDTVARDHVSVWN 187
A + G +K + AL++ K G+ ++ +V FD + + +N
Sbjct: 751 AITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYN 809
Query: 188 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 247
MI+ L G A +F +M+ N++P IT+ +L G E F +
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMG---RRAEMFPVFDEA 866
Query: 248 FL--IQPQLEHYGTMVDLLGRAGNLEEACNMIKAM--------PVEPDVVIWRALLSACR 297
I+P Y +++ + G +A ++ M + + RALLS
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFA 926
Query: 298 IHGKKELAEFAIANISRLE 316
G+ E+AE + N+ RL+
Sbjct: 927 KVGEMEVAEKVMENMVRLQ 945
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 115/280 (41%), Gaps = 44/280 (15%)
Query: 67 CDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTG 126
C R + D+ + D T+ L+ G KN + D +FR M + PD F++ ++ G
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 127 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA----RDH 182
++LG + A + M+E+ + N I+ L+ + + G I+ +K++ D ++ +
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 183 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 242
+ +I+G G +A +F M+++ ++PDS + ++ C V F
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG 756
Query: 243 IMQ------------------------------NRFLI-------QPQLEHYGTMVDLLG 265
+ NR + +P Y M+D L
Sbjct: 757 TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLC 816
Query: 266 RAGNLEEACNMIKAMP---VEPDVVIWRALLSACRIHGKK 302
+ GNLE A + M + P V+ + +LL+ G++
Sbjct: 817 KEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 133/283 (46%), Gaps = 28/283 (9%)
Query: 37 QPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRD-----VVTWNTLIGG 91
QP H D + ++ +L +A + K+ D+M VRD VT+N LI
Sbjct: 352 QPGFKH-------DGHTYTTMVGNLGRAKQFGEINKLLDEM-VRDGCKPNTVTYNRLIHS 403
Query: 92 YVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLN 151
Y + + + +F M A EPD T+ +++ A+ G L A ++ M E + +
Sbjct: 404 YGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPD 463
Query: 152 YILSAALVDMYAKCGRIDVSKQVF-DTVAR---DHVSVWNAMINGLAVHGLALD---AIA 204
+ +++ K G + + ++F + V + ++ +N MI A+H A + A+
Sbjct: 464 TFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI---ALHAKARNYETALK 520
Query: 205 VFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLL 264
++ M+ PD +T+ +++ HCG + E F MQ + + P YG +VDL
Sbjct: 521 LYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV-PDEPVYGLLVDLW 579
Query: 265 GRAGNLEEACNMIKAM---PVEPDVVIWRALLSA-CRIHGKKE 303
G+AGN+++A +AM + P+V +LLS R+H E
Sbjct: 580 GKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSE 622
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 109/232 (46%), Gaps = 22/232 (9%)
Query: 27 ALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKVFDKMP-- 78
LI +A+ IA ++ R+ DTF+ +++I L KAG A ++F +M
Sbjct: 434 TLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQ 493
Query: 79 --VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA 136
++VT+N +I + K + L+L+R M +A +PD T++ V+ G L A
Sbjct: 494 GCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEA 553
Query: 137 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV----ARDHVSVWNAMING 192
+ V M K + + LVD++ K G +D + Q + + R +V N++++
Sbjct: 554 EGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLST 613
Query: 193 -LAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 243
L VH ++ +A + M + P T+ +L C+ + R +F++
Sbjct: 614 FLRVHRMS-EAYNLLQSMLALGLHPSLQTYTLLLSCCT------DARSNFDM 658
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 124/298 (41%), Gaps = 35/298 (11%)
Query: 6 AAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR-VMDTFSKNLVIESLMKA 64
AA+ ++ G++ AL+ Y + H+P A V + V++ FS +
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPS--------- 348
Query: 65 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVV 124
+VT+N+LI Y ++ + + L M +PD FT+ +++
Sbjct: 349 -----------------IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 125 TGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA----R 180
+G R G + +A + M K N A + MY G+ ++FD +
Sbjct: 392 SGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 451
Query: 181 DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREH 240
+ WN ++ +G+ + VF M+ +P+ TF ++ A S CG +
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 511
Query: 241 FNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSA 295
+ M + + P L Y T++ L R G E++ ++ M +P+ + + +LL A
Sbjct: 512 YRRMLDAG-VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 124/292 (42%), Gaps = 23/292 (7%)
Query: 23 SLVAALISTYARCHQPHIAHHVFSRV------MDTFSKNLVIESLMKAGECDIARKVFDK 76
S+VA +IS + + A ++F+ + +D +S +I + +G A VF K
Sbjct: 174 SVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKK 233
Query: 77 M------PVRDVVTWNTLIGGYVK-NVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
M P ++T+N ++ + K + L M S + PD +T+ +++T C R
Sbjct: 234 MEEDGCKPT--LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS----V 185
A V M + + AL+D+Y K R + +V + + + S
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT 351
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 245
+N++I+ A G+ +A+ + ++M + PD T+ +L G V F M+
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 246 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV---EPDVVIWRALLS 294
N +P + + + + G G E + + V PD+V W LL+
Sbjct: 412 NAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLA 462
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 11/229 (4%)
Query: 77 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA 136
+P R+ T+NTLI Y + F + ++R ML A V PD T+ +V+ AR G +
Sbjct: 486 VPERE--TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS 543
Query: 137 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRI----DVSKQVFDTVARDHVSVWNAMING 192
+ V M + R K N + +L+ YA I ++++V+ V + ++
Sbjct: 544 EKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLV 603
Query: 193 LAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQP 252
+ L +A FS ++ PD T ++ +V + + M+ R P
Sbjct: 604 CSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT-P 662
Query: 253 QLEHYGTMVDLLGRA---GNLEEACNMIKAMPVEPDVVIWRALLSA-CR 297
+ Y +++ + R+ G EE I A ++PD++ + ++ A CR
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCR 711
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 124/271 (45%), Gaps = 21/271 (7%)
Query: 37 QPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRD-----VVTWNTLIGG 91
QP H D + ++ +L +A + K+ D+M VRD VT+N LI
Sbjct: 357 QPGFKH-------DGHTYTTMVGNLGRAKQFGAINKLLDEM-VRDGCQPNTVTYNRLIHS 408
Query: 92 YVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLN 151
Y + + + +F M A +PD T+ +++ A+ G L A ++ M + +
Sbjct: 409 YGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 468
Query: 152 YILSAALVDMYAKCGRIDVSKQVF----DTVARDHVSVWNAMINGLAVHGLALDAIAVFS 207
+ +++ K G + + ++F D ++ +N M++ A +A+ ++
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Query: 208 RMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRA 267
M+ PD +T+ +++ HCG + E F MQ + I P YG +VDL G+A
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKA 587
Query: 268 GNLEEACNMIKAM---PVEPDVVIWRALLSA 295
GN+E+A +AM + P+V +LLS
Sbjct: 588 GNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 27 ALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKVF----DK 76
LI +A+ IA ++ R+ DTF+ +++I L KAG A K+F D+
Sbjct: 439 TLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
Query: 77 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA 136
++VT+N ++ + K + + L+L+R M +A EPD T++ V+ G L A
Sbjct: 499 GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 137 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV----ARDHVSVWNAMING 192
+ V M +K + + LVD++ K G ++ + Q + + R +V N++++
Sbjct: 559 EAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Query: 193 -LAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
L V+ +A +A + M + P T+ +L C+
Sbjct: 619 FLRVNKIA-EAYELLQNMLALGLRPSLQTYTLLLSCCT 655
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 124/271 (45%), Gaps = 21/271 (7%)
Query: 37 QPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRD-----VVTWNTLIGG 91
QP H D + ++ +L +A + K+ D+M VRD VT+N LI
Sbjct: 357 QPGFKH-------DGHTYTTMVGNLGRAKQFGAINKLLDEM-VRDGCQPNTVTYNRLIHS 408
Query: 92 YVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLN 151
Y + + + +F M A +PD T+ +++ A+ G L A ++ M + +
Sbjct: 409 YGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 468
Query: 152 YILSAALVDMYAKCGRIDVSKQVF----DTVARDHVSVWNAMINGLAVHGLALDAIAVFS 207
+ +++ K G + + ++F D ++ +N M++ A +A+ ++
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Query: 208 RMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRA 267
M+ PD +T+ +++ HCG + E F MQ + I P YG +VDL G+A
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKA 587
Query: 268 GNLEEACNMIKAM---PVEPDVVIWRALLSA 295
GN+E+A +AM + P+V +LLS
Sbjct: 588 GNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 27 ALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKVF----DK 76
LI +A+ IA ++ R+ DTF+ +++I L KAG A K+F D+
Sbjct: 439 TLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
Query: 77 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA 136
++VT+N ++ + K + + L+L+R M +A EPD T++ V+ G L A
Sbjct: 499 GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 137 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV----ARDHVSVWNAMING 192
+ V M +K + + LVD++ K G ++ + Q + + R +V N++++
Sbjct: 559 EAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Query: 193 -LAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
L V+ +A +A + M + P T+ +L C+
Sbjct: 619 FLRVNKIA-EAYELLQNMLALGLRPSLQTYTLLLSCCT 655
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 124/271 (45%), Gaps = 21/271 (7%)
Query: 37 QPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRD-----VVTWNTLIGG 91
QP H D + ++ +L +A + K+ D+M VRD VT+N LI
Sbjct: 357 QPGFKH-------DGHTYTTMVGNLGRAKQFGAINKLLDEM-VRDGCQPNTVTYNRLIHS 408
Query: 92 YVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLN 151
Y + + + +F M A +PD T+ +++ A+ G L A ++ M + +
Sbjct: 409 YGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 468
Query: 152 YILSAALVDMYAKCGRIDVSKQVF----DTVARDHVSVWNAMINGLAVHGLALDAIAVFS 207
+ +++ K G + + ++F D ++ +N M++ A +A+ ++
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Query: 208 RMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRA 267
M+ PD +T+ +++ HCG + E F MQ + I P YG +VDL G+A
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKA 587
Query: 268 GNLEEACNMIKAM---PVEPDVVIWRALLSA 295
GN+E+A +AM + P+V +LLS
Sbjct: 588 GNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 27 ALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKVF----DK 76
LI +A+ IA ++ R+ DTF+ +++I L KAG A K+F D+
Sbjct: 439 TLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
Query: 77 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA 136
++VT+N ++ + K + + L+L+R M +A EPD T++ V+ G L A
Sbjct: 499 GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 137 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV----ARDHVSVWNAMING 192
+ V M +K + + LVD++ K G ++ + Q + + R +V N++++
Sbjct: 559 EAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Query: 193 -LAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 229
L V+ +A +A + M + P T+ +L C+
Sbjct: 619 FLRVNKIA-EAYELLQNMLALGLRPSLQTYTLLLSCCT 655
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 47/262 (17%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 110
N +I+ L K GE +IA ++ ++M + DVVT+NTL+ G + R+ D R+ R M+
Sbjct: 180 NTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK 239
Query: 111 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 170
+ PD TF AL+D++ K G +D
Sbjct: 240 RSINPDVVTFT-----------------------------------ALIDVFVKQGNLDE 264
Query: 171 SKQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 226
+++++ + + V +N++INGL +HG DA F M + P+ +T+ ++
Sbjct: 265 AQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLIS 324
Query: 227 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVE 283
+V+EG + F M + Y T++ + G L A ++ M V
Sbjct: 325 GFCKFRMVDEGMKLFQRMSCEGF-NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVT 383
Query: 284 PDVVIWRALLSACRIHGKKELA 305
PD++ LL ++G+ E A
Sbjct: 384 PDIITHCILLHGLCVNGEIESA 405
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 89/187 (47%), Gaps = 9/187 (4%)
Query: 53 SKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGM 108
+ N +I L G A+K FD M + +VVT+NTLI G+ K +G++LF+ M
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 109 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 168
D FT+ +++ G ++G L A + M+ +RV + I L+ G I
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402
Query: 169 DVSKQVFDTVARDH----VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF-VG 223
+ + FD + + +N MI+GL A +F R+ VE V PD+ T+ +
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462
Query: 224 ILKACSH 230
IL C +
Sbjct: 463 ILGLCKN 469
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 99/222 (44%), Gaps = 8/222 (3%)
Query: 81 DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVH 140
D+ ++ LI + + R L + M+ EP TF S++ G + + +A +
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 141 GLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD----HVSVWNAMINGLAVH 196
LM++ + N ++ L+D K G ++++ ++ + + + V +N ++ GL
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 197 GLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEH 256
G DA + M ++ PD +TF ++ G ++E +E + M + P
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS-SVDPNNVT 283
Query: 257 YGTMVDLLGRAGNLEEACNMIKAMPVE---PDVVIWRALLSA 295
Y ++++ L G L +A M + P+VV + L+S
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 141/337 (41%), Gaps = 50/337 (14%)
Query: 6 AAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMD------TFSKNLVIE 59
A + H + G+A P LI Y + A V +++ T + N+ I
Sbjct: 292 ARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYIC 351
Query: 60 SLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFT 119
+L G D AR++ M DVV++NTL+ GY+K +F++ LF + + ++ P T
Sbjct: 352 ALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 411
Query: 120 FASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDT-- 177
+ +++ G G L A+ + M + + + I LV + K G + ++ +V+D
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Query: 178 ----------------------------------VARDH----VSVWNAMINGLAVHGLA 199
VA DH ++++N I+GL G
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 531
Query: 200 LDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGT 259
+ AI ++ ++PD +T+ +++ G R ++ M + L P + Y
Sbjct: 532 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLY-PSVITYFV 590
Query: 260 MVDLLGRAGNLEEACNM---IKAMPVEPDVVIWRALL 293
++ +AG LE+A +K V P+V+ ALL
Sbjct: 591 LIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALL 627
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 10/177 (5%)
Query: 62 MKAGECDIARKVFDKMPVRD-----VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 116
++ G+ D A ++ ++M D + +N I G K + + R + + PD
Sbjct: 490 LRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPD 549
Query: 117 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 176
T+ +V+ G G A+ ++ ML KR+ + I L+ +AK GR++ + Q
Sbjct: 550 HVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYST 609
Query: 177 TV----ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL-KAC 228
+ R +V NA++ G+ G +A +ME E + P+ ++ ++ K C
Sbjct: 610 EMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNC 666
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Query: 34 RCHQPHIA--HHVFSRVMDTFSKNLVIESLMKAGEC----DIARKVFDKMPVRDVVTWNT 87
R H+ +A HH D N+ I+ L K G + RK+F V D VT+ T
Sbjct: 500 RLHEEMVATDHHA----PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTT 555
Query: 88 LIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKR 147
+I GY++N +F L+ ML + P T+ ++ G A+ G L A M ++
Sbjct: 556 VIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRG 615
Query: 148 VKLNYILSAALVDMYAKCGRID 169
V+ N + AL+ K G ID
Sbjct: 616 VRPNVMTHNALLYGMCKAGNID 637
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 118/255 (46%), Gaps = 12/255 (4%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRD----VVTWNTLIGGYVKNVRFLDGLRLF 105
DT +I+ K G+ A K F +M RD V+T+ +I G+ + ++ +LF
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
M +EPD TF ++ G + G + +A VH M++ N + L+D K
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 166 GRIDVSKQVFDTV----ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
G +D + ++ + + ++ +N+++NGL G +A+ + E + D++T+
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 222 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEA---CNMIK 278
++ A G +++ +E M + L QP + + +++ G LE+ N +
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGL-QPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 279 AMPVEPDVVIWRALL 293
A + P+ + +L+
Sbjct: 589 AKGIAPNATTFNSLV 603
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 121/281 (43%), Gaps = 11/281 (3%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGEC 67
H++ I TY ++++ + H +F + + D+ + +I KAG
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 68 DIARKVFDKMP----VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 123
A +V + M +VVT+ TLI G K L M ++P+ FT+ S+
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA---- 179
V G + G + A + G + + + L+D Y K G +D ++++ +
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 180 RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE 239
+ + +N ++NG +HG+ D + + M + + P++ TF ++K +
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 240 HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 280
+ M +R + P + Y +V +A N++EA + + M
Sbjct: 618 IYKDMCSRG-VGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 88/189 (46%), Gaps = 10/189 (5%)
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
PD ++++VV G R G L + +M K +K N + +++ + + ++ +++
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 175 FDTVARDHV----SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 230
F + R + V+ +I+G G A F M ++ PD +T+ I+
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 231 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEAC----NMIKAMPVEPDV 286
G + E + F+ M + L +P + +++ +AG++++A +MI+A P+V
Sbjct: 399 IGDMVEAGKLFHEMFCKGL-EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNV 456
Query: 287 VIWRALLSA 295
V + L+
Sbjct: 457 VTYTTLIDG 465
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 118/255 (46%), Gaps = 12/255 (4%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVRD----VVTWNTLIGGYVKNVRFLDGLRLF 105
DT +I+ K G+ A K F +M RD V+T+ +I G+ + ++ +LF
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
M +EPD TF ++ G + G + +A VH M++ N + L+D K
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 166 GRIDVSKQVFDTV----ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
G +D + ++ + + ++ +N+++NGL G +A+ + E + D++T+
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 222 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEA---CNMIK 278
++ A G +++ +E M + L QP + + +++ G LE+ N +
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGL-QPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 279 AMPVEPDVVIWRALL 293
A + P+ + +L+
Sbjct: 589 AKGIAPNATTFNSLV 603
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 121/281 (43%), Gaps = 11/281 (3%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGEC 67
H++ I TY ++++ + H +F + + D+ + +I KAG
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 68 DIARKVFDKMP----VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 123
A +V + M +VVT+ TLI G K L M ++P+ FT+ S+
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA---- 179
V G + G + A + G + + + L+D Y K G +D ++++ +
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 180 RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE 239
+ + +N ++NG +HG+ D + + M + + P++ TF ++K +
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 240 HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 280
+ M +R + P + Y +V +A N++EA + + M
Sbjct: 618 IYKDMCSRG-VGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 88/189 (46%), Gaps = 10/189 (5%)
Query: 115 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 174
PD ++++VV G R G L + +M K +K N + +++ + + ++ +++
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 175 FDTVARDHV----SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 230
F + R + V+ +I+G G A F M ++ PD +T+ I+
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 231 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEAC----NMIKAMPVEPDV 286
G + E + F+ M + L +P + +++ +AG++++A +MI+A P+V
Sbjct: 399 IGDMVEAGKLFHEMFCKGL-EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNV 456
Query: 287 VIWRALLSA 295
V + L+
Sbjct: 457 VTYTTLIDG 465
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 137/308 (44%), Gaps = 22/308 (7%)
Query: 28 LISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKVFDKM---- 77
+I+ + C Q +A + +++ D + ++ + A + DKM
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 78 --PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCN 135
P D+V +N +I K R D F+ + + P+ T+ ++V G +
Sbjct: 186 YKP--DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 136 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR----DHVSVWNAMIN 191
A + M++K++ N I +AL+D + K G++ +K++F+ + R + ++++IN
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 192 GLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQ 251
GL +H +A +F M + L D +++ ++ V +G + F M R L+
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 252 PQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSACRIHGKKELAEFA 308
+ Y T++ +AG++++A M + PD+ + LL +G+ E A
Sbjct: 364 NTV-TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 309 IANISRLE 316
++ + E
Sbjct: 423 FEDMQKRE 430
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 12/252 (4%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 110
N ++ +++K + D+ + KM V D+ T+N +I + + L + ML
Sbjct: 89 NRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLK 148
Query: 111 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 170
EPD T S+V G R + +A + M+E K + + A++D K R++
Sbjct: 149 LGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVND 208
Query: 171 SKQVFDTVARD----HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 226
+ F + R +V + A++NGL DA + S M + + P+ IT+ +L
Sbjct: 209 AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 268
Query: 227 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE--- 283
A G V E +E F M R I P + Y ++++ L ++EA M M +
Sbjct: 269 AFVKNGKVLEAKELFEEMV-RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 284 PDVVIWRALLSA 295
DVV + L++
Sbjct: 328 ADVVSYNTLING 339
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 113/257 (43%), Gaps = 24/257 (9%)
Query: 12 KLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC---- 67
K I TY +L+ A + + + +D ++V S + G C
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP---DIVTYSSLINGLCLHDR 310
Query: 68 -DIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 122
D A ++FD M + DVV++NTLI G+ K R DG++LFR M + + T+ +
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 123 VVTGCARLGALCNAKWVHGLM----LEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV 178
++ G + G + A+ M + + IL L D G ++ + +F+ +
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN----GELEKALVIFEDM 426
Query: 179 ARDHVSV----WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
+ + + + +I G+ G +A ++F + ++ + PD +T+ ++ GL+
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 486
Query: 235 NEGREHFNIMQNRFLIQ 251
+E + M+ L++
Sbjct: 487 HEVEALYTKMKQEGLMK 503
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 112/232 (48%), Gaps = 9/232 (3%)
Query: 50 DTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLF 105
D F+ + +I+SL + G D A +F +M + VVT+N+L+ G K ++ DG L
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 106 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 165
+ M+S E+ P+ TF ++ + G L A ++ M+ + + N I L+D Y
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346
Query: 166 GRIDVSKQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 221
R+ + + D + R+ S + ++I G + D + VF + ++ +++T+
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 406
Query: 222 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEA 273
+++ G + E F M + ++ P + YG ++D L G LE+A
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVL-PDVMTYGILLDGLCDNGKLEKA 457
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 146/346 (42%), Gaps = 53/346 (15%)
Query: 12 KLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAG 65
+L ++G A + +I+ + RC + A+ V +VM DT + N +I+ L G
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172
Query: 66 ECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 121
+ A + D+M DVVT+N+++ G ++ L L R M V+ D FT++
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 122 SVVTGCARLG-----------------------------ALCNA-KWVHGL-----MLEK 146
+++ R G LC A KW G M+ +
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 147 RVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS----VWNAMINGLAVHGLALDA 202
+ N I L+D++ K G++ + +++ + +S +N +++G + +A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 203 IAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVD 262
+ M PD +TF ++K V++G + F + R L+ + Y +V
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV-TYSILVQ 411
Query: 263 LLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSACRIHGKKELA 305
++G ++ A + + M V PDV+ + LL +GK E A
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 133/299 (44%), Gaps = 14/299 (4%)
Query: 10 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAGEC 67
K I TY SLV L + + SR V + + N++++ +K G+
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
Query: 68 DIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 123
A +++ +M R +++T+NTL+ GY R + + M+ + PD TF S+
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 124 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR--- 180
+ G + + + V + ++ + N + + LV + + G+I +++++F +
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 181 -DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE 239
V + +++GL +G A+ +F ++ + + + I++ G V +
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 240 HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE---PDVVIWRALLSA 295
F + + ++P + Y M+ L + G+L EA +++ M + P+ + L+ A
Sbjct: 495 LFCSLPCKG-VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 138/313 (44%), Gaps = 42/313 (13%)
Query: 20 TYPSLVAALISTYARCHQPHIAHHV-FSRVM-------DTFSKNLVIESLMKAGECDIAR 71
T+ +LV L C H+ H + VM D ++ N VI L K GE A
Sbjct: 297 TFNTLVNGL------CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 72 KVFDKMPVRD----VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 127
+V D+M RD VT+NTLI K + + L R + S + PD TF S++ G
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG- 409
Query: 128 ARLGALC---NAKWVHGLMLEKRVK---LNYILSAALVDMYAKCGRIDVS----KQVFDT 177
LC N + L E R K + L+D G++D + KQ+ +
Sbjct: 410 -----LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 178 VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEG 237
V +N +I+G +A +F MEV V +S+T+ ++ V +
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 238 REHFN--IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRAL 292
+ + IM+ + +P Y +++ R G++++A ++++AM EPD+V + L
Sbjct: 525 AQLMDQMIMEGQ---KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581
Query: 293 LSACRIHGKKELA 305
+S G+ E+A
Sbjct: 582 ISGLCKAGRVEVA 594
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 159/368 (43%), Gaps = 27/368 (7%)
Query: 9 THAKLIVHGYATYPSLVAALISTYARCHQ--PHI----AHHVFSRVMDTFSKNLVIESLM 62
+HAK+ V G S LI R HQ P I + V D + V++ +
Sbjct: 176 SHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYI 235
Query: 63 KAGECDIARKVFDKMPVRDVVTW-----NTLIGGYVKNVRFLDGLRLFRGMLSAE-VEPD 116
+ G+ D A ++ ++M V +W N ++ G+ K R D L + M + + PD
Sbjct: 236 EEGDLDGALRIREQM-VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 117 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 176
+TF ++V G + G + +A + +ML++ + +++ K G + + +V D
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 177 T-VARD---HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 232
+ RD + +N +I+ L +A + + + +LPD TF +++
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 233 LVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEP---DVVIW 289
E F M+++ +P Y ++D L G L+EA NM+K M + V+ +
Sbjct: 415 NHRVAMELFEEMRSKG-CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY 473
Query: 290 RALLSA-CRIHGKKE----LAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMK 344
L+ C+ + +E E + +SR S + L + C + +A ++ + M
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEMEVHGVSR-NSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 345 IGGVRKKR 352
+ G + +
Sbjct: 533 MEGQKPDK 540
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 55 NLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 110
N +I+ KA + A ++FD+M V R+ VT+NTLI G K+ R D +L M+
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Query: 111 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 170
+PD +T+ S++T R G + A + M + + + L+ K GR++V
Sbjct: 534 EGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEV 593
Query: 171 SKQVFDTVARDHVSV----WNAMINGLAVHGLALDAIAVFSRM-EVENVLPDSITFVGIL 225
+ ++ ++ +++ +N +I GL +AI +F M E PD++++ +
Sbjct: 594 ASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVF 653
Query: 226 KA-CSHCGLVNEG 237
+ C+ G + E
Sbjct: 654 RGLCNGGGPIREA 666
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 120/250 (48%), Gaps = 24/250 (9%)
Query: 12 KLIVHGYATYPSLVAAL---------ISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLM 62
+++ G+ Y +++ L ++ ++ + HI HV N +I+ L
Sbjct: 35 RMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIY-------NAIIDRLC 87
Query: 63 KAGECDIARKVF----DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGF 118
K G A+ +F DK DV+T++ +I + ++ R+ D +L R M+ ++ PD
Sbjct: 88 KDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVV 147
Query: 119 TFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV 178
TF++++ + G + A+ ++G ML + + I +++D + K R++ +K++ D++
Sbjct: 148 TFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSM 207
Query: 179 ARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 234
A S ++ +ING + + +F M ++ +++T+ ++ G +
Sbjct: 208 ASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL 267
Query: 235 NEGREHFNIM 244
+ ++ N+M
Sbjct: 268 DAAQDLLNVM 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 20 TYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGECDIARKVFDKM 77
T+ +L+ AL+ I + R + T + N +I+ K + A+++ D M
Sbjct: 148 TFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSM 207
Query: 78 PVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGAL 133
+ DVVT++TLI GY K R +G+ +F M + + T+ +++ G ++G L
Sbjct: 208 ASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL 267
Query: 134 CNAKWVHGLMLEKRVKLNYILSAALV 159
A+ + +M+ V NYI +++
Sbjct: 268 DAAQDLLNVMISSGVAPNYITFQSML 293
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 142/327 (43%), Gaps = 29/327 (8%)
Query: 38 PHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYV 93
P IA FSR++ SK MK + D+ ++++M + ++ T N L+ +
Sbjct: 79 PSIAD--FSRLLSAISK-------MK--KYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127
Query: 94 KNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYI 153
+ + L M+ EP TF S++ G R + +A ++ M+ K N +
Sbjct: 128 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVV 187
Query: 154 LSAALVDMYAKCGRIDVSKQVFDTVARD----HVSVWNAMINGLAVHGLALDAIAVFSRM 209
+ ++D K ++D + + + + +D V +N++I+GL G DA + S M
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM 247
Query: 210 EVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGN 269
+ PD TF ++ AC G V+E E + M R L P + Y ++ L
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL-DPDIVTYSLLIYGLCMYSR 306
Query: 270 LEEACNMIKAMPVE---PDVVIWRALLSA-CRI----HGKKELAEFAIANISRLESGDFV 321
L+EA M M + PDVV + L++ C+ HG K E + + R + +
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR-NTVTYT 365
Query: 322 LLSNMYCSLKNWHNAERVRNMMKIGGV 348
+L YC + AE + M GV
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGV 392
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 137/292 (46%), Gaps = 22/292 (7%)
Query: 22 PSLV--AALISTYARCHQPHIAHHVFSRVMDTFSK------NLVIESLMKAGECDIARKV 73
PS+V +L++ + R + + A ++F +++ K N +I+ L K+ + D A +
Sbjct: 149 PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 74 FDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 129
++M DVVT+N+LI G + R+ D R+ M E+ PD FTF +++ C +
Sbjct: 209 LNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 130 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD----HVSV 185
G + A+ + M+ + + + + + L+ R+D ++++F + V
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVT 328
Query: 186 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 245
++ +ING + +F M V+ +++T+ +++ G +N E F M
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Query: 246 NRFL-IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALL 293
F + P + Y ++ L G +E+A ++ M ++ D+V + ++
Sbjct: 389 --FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 131/277 (47%), Gaps = 23/277 (8%)
Query: 20 TYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGECDIARKVFDKM 77
TY SL++ L S+ + + R + D F+ N +I++ +K G A + +++M
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282
Query: 78 PVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGAL 133
R D+VT++ LI G R + +F M+S PD T++ ++ G
Sbjct: 283 IRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILING------Y 336
Query: 134 CNAKWV-HGL-----MLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA----RDHV 183
C +K V HG+ M ++ V N + L+ Y + G+++V++++F + ++
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396
Query: 184 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 243
+N +++GL +G A+ + + M+ + D +T+ I++ G V + + +
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCS 456
Query: 244 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 280
+ + L+ P + Y TM+ L + G EA + + M
Sbjct: 457 LNCQGLM-PDIWTYTTMMLGLYKKGLRREADALFRKM 492
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 131/299 (43%), Gaps = 19/299 (6%)
Query: 22 PSLVAALISTYARCHQPHIAHHVFSRV------MDTFSKNLVIESLMKAGECDIARKVFD 75
P A + YA +P A +F + D S N +++ L K+ + A ++F
Sbjct: 126 PKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR 185
Query: 76 KMPVR---DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGA 132
+ R D VT+N ++ G+ R L + + M+ + P+ T+ +++ G R G
Sbjct: 186 ALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ 245
Query: 133 LCNAKWVHGLMLEKR-VKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD----HVSVWN 187
+ +A W L ++KR +++ + +V + G I ++ VFD + R+ V+ +N
Sbjct: 246 IRHA-WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYN 304
Query: 188 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 247
AMI L +A+ +F M P+ T+ +++ H G + G E M+N
Sbjct: 305 AMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENE 364
Query: 248 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSACRIHGKKE 303
+P + Y M+ +E+A + + M P++ + L+S + + E
Sbjct: 365 G-CEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSE 422