Miyakogusa Predicted Gene
- Lj6g3v1463990.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1463990.1 Non Chatacterized Hit- tr|D7T700|D7T700_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,25.66,2e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PPR,Pentatricopeptide repeat; PPR_2,Pentatricopepti,CUFF.59671.1
(451 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 463 e-131
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 4e-84
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 1e-80
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 1e-77
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 2e-77
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 4e-76
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 281 6e-76
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 279 3e-75
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 278 4e-75
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 276 1e-74
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 5e-74
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 6e-74
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 274 8e-74
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 2e-73
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 4e-73
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 3e-72
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 268 5e-72
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 7e-72
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 2e-71
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 265 5e-71
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 8e-71
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 263 1e-70
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 263 2e-70
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 3e-70
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 4e-70
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 259 4e-69
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 258 7e-69
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 7e-69
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 7e-69
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 2e-68
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 7e-68
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 8e-68
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 8e-68
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 1e-67
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 253 2e-67
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 253 2e-67
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 3e-67
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 252 3e-67
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 252 3e-67
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 252 4e-67
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 252 4e-67
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 1e-66
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 250 1e-66
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 2e-66
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 2e-66
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 249 3e-66
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 5e-66
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 248 5e-66
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 248 5e-66
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 248 5e-66
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 5e-66
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 248 6e-66
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 7e-66
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 1e-65
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 2e-65
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 244 8e-65
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 1e-64
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 6e-64
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 7e-64
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 8e-64
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 1e-63
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 3e-63
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 4e-63
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 238 5e-63
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 5e-63
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 237 1e-62
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 1e-62
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 237 1e-62
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 2e-62
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 9e-62
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 3e-61
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 6e-61
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 231 6e-61
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 231 6e-61
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 6e-61
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 8e-61
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 231 9e-61
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 230 1e-60
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 1e-60
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 1e-60
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 1e-59
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 4e-59
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 4e-59
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 8e-59
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 3e-58
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 3e-58
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 3e-58
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 221 1e-57
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 220 2e-57
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 219 3e-57
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 219 3e-57
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 219 3e-57
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 4e-57
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 8e-57
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 2e-56
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 6e-56
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 5e-55
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 6e-55
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 7e-55
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 210 1e-54
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 3e-54
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 209 4e-54
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 7e-54
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 8e-54
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 9e-54
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 9e-54
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 206 2e-53
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 2e-53
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 2e-53
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 3e-53
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 5e-53
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 205 6e-53
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 3e-52
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 4e-52
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 4e-52
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 202 6e-52
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 2e-51
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 199 3e-51
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 3e-50
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 4e-50
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 5e-50
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 195 6e-50
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 193 2e-49
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 192 4e-49
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 5e-48
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 5e-48
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 6e-48
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 4e-47
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 185 6e-47
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 185 7e-47
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 8e-47
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 183 2e-46
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 4e-44
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 2e-43
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 2e-43
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 4e-41
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 164 1e-40
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 3e-40
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 4e-37
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 1e-36
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 3e-36
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 3e-35
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 5e-34
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 7e-31
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 8e-22
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 9e-22
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 97 2e-20
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 95 1e-19
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 91 2e-18
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 89 6e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 7e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 7e-18
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 89 7e-18
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 89 8e-18
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 6e-17
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 8e-17
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 80 2e-15
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 80 2e-15
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 79 5e-15
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 77 2e-14
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 76 5e-14
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 75 7e-14
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 75 7e-14
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 75 1e-13
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 75 1e-13
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 74 1e-13
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 4e-13
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 6e-13
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 72 7e-13
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 1e-12
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 69 8e-12
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 66 5e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 64 3e-10
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 58 1e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 56 4e-08
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 9e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 52 1e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 50 5e-06
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 463 bits (1192), Expect = e-131, Method: Compositional matrix adjust.
Identities = 217/417 (52%), Positives = 301/417 (72%), Gaps = 5/417 (1%)
Query: 38 SLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAH 97
+LTDH + +VL+ +A +S + HA++ GY TYPSL+ + ++ Y RC++ ++A
Sbjct: 26 NLTDHGMLKQVLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLAR 85
Query: 98 HVF----SRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRF 153
+ S + NL+IESLMK GE +A+KV ++V+TWN +IGGYV+NV++
Sbjct: 86 RLLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQY 145
Query: 154 LDGLRLFRGMLS-AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAA 212
+ L+ + MLS +++P+ F+FAS + CARLG L +AKWVH LM++ ++LN ILS+A
Sbjct: 146 EEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSA 205
Query: 213 LVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPD 272
LVD+YAKCG I S++VF +V R+ VS+WNAMI G A HGLA +AI VFS ME E+V PD
Sbjct: 206 LVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPD 265
Query: 273 SITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMI 332
SITF+G+L CSHCGL+ EG+E+F +M RF IQP+LEHYG MVDLLGRAG ++EA +I
Sbjct: 266 SITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELI 325
Query: 333 KAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAE 392
++MP+EPDVVIWR+LLS+ R + EL E AI N+S+ +SGD+VLLSN+Y S K W +A+
Sbjct: 326 ESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGDYVLLSNIYSSTKKWESAQ 385
Query: 393 RVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
+VR +M G+RK +GKSW+E G IH+F A D SH E KAI++VLEGLIQ+ K G
Sbjct: 386 KVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQG 442
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/382 (42%), Positives = 240/382 (62%), Gaps = 8/382 (2%)
Query: 75 TYPSLVAALISTYARCHQPHIAHHVFSRV---MDTFSKNLVIESLMKAGECDIARKVFDK 131
TYP L+ A ++T A H V R + +N ++ G+ A KVFDK
Sbjct: 123 TYPFLIKA-VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDK 181
Query: 132 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA 191
MP +D+V WN++I G+ +N + + L L+ M S ++PDGFT S+++ CA++GAL
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241
Query: 192 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 251
K VH M++ + N S L+D+YA+CGR++ +K +FD + + W ++I GLAV+
Sbjct: 242 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301
Query: 252 GLALDAIAVFSRME-VENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLE 310
G +AI +F ME E +LP ITFVGIL ACSHCG+V EG E+F M+ + I+P++E
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 361
Query: 311 HYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRL 370
H+G MVDLL RAG +++A IK+MP++P+VVIWR LL AC +HG +LAEFA I +L
Sbjct: 362 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL 421
Query: 371 E---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQS 427
E SGD+VLLSNMY S + W + +++R M GV+K G S +E+G+ +H+F D+S
Sbjct: 422 EPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKS 481
Query: 428 HAEMKAIHRVLEGLIQRAKFDG 449
H + AI+ L+ + R + +G
Sbjct: 482 HPQSDAIYAKLKEMTGRLRSEG 503
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 130/266 (48%), Gaps = 9/266 (3%)
Query: 115 SLMKAGECDIARKVFDKM--PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM-LSAEVEPD 171
SL A KVF K+ P+ +V WNTLI GY + + L+R M +S VEPD
Sbjct: 62 SLPSPPPMSYAHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPD 120
Query: 172 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 231
T+ ++ + + + +H +++ + +L+ +YA CG + + +VFD
Sbjct: 121 THTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFD 180
Query: 232 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 291
+ + WN++ING A +G +A+A+++ M + + PD T V +L AC+ G +
Sbjct: 181 KMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTL 240
Query: 292 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 351
G+ ++ + + L ++DL R G +EEA + M V+ + V W +L+
Sbjct: 241 GK-RVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGL 298
Query: 352 RIHGKKELAEFAIANISRLESGDFVL 377
++G + AI +ES + +L
Sbjct: 299 AVNG---FGKEAIELFKYMESTEGLL 321
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 308 bits (790), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 151/347 (43%), Positives = 227/347 (65%), Gaps = 4/347 (1%)
Query: 107 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 166
+ +N ++ G+ A KVFDKMP +D+V WN++I G+ +N + + L L+ M S
Sbjct: 24 YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK 83
Query: 167 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
++PDGFT S+++ CA++GAL K VH M++ + N S L+D+YA+CGR++ +
Sbjct: 84 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 143
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRME-VENVLPDSITFVGILKACSH 285
K +FD + + W ++I GLAV+G +AI +F ME E +LP ITFVGIL ACSH
Sbjct: 144 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 203
Query: 286 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
CG+V EG E+F M+ + I+P++EH+G MVDLL RAG +++A IK+MP++P+VVIWR
Sbjct: 204 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWR 263
Query: 346 ALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGG 402
LL AC +HG +LAEFA I +LE SGD+VLLSNMY S + W + +++R M G
Sbjct: 264 TLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDG 323
Query: 403 VRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
V+K G S +E+G+ +H+F D+SH + AI+ L+ + R + +G
Sbjct: 324 VKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEG 370
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 297 bits (760), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/425 (37%), Positives = 256/425 (60%), Gaps = 18/425 (4%)
Query: 40 TDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHV 99
D F +L + +THA++++ G P + +L++ Y+ C A V
Sbjct: 60 PDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRV 119
Query: 100 FSRVMDTFSKNL-----VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFL 154
F D+ SK+L V+ + KAG D ARK+FD+MP R+V++W+ LI GYV ++
Sbjct: 120 FD---DSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYK 176
Query: 155 DGLRLFRGML-----SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYIL 209
+ L LFR M A V P+ FT ++V++ C RLGAL KWVH + + V+++ +L
Sbjct: 177 EALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVL 236
Query: 210 SAALVDMYAKCGRIDVSKQVFDTV-ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEV-E 267
AL+DMYAKCG ++ +K+VF+ + ++ V ++AMI LA++GL + +FS M +
Sbjct: 237 GTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSD 296
Query: 268 NVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEE 327
N+ P+S+TFVGIL AC H GL+NEG+ +F +M F I P ++HYG MVDL GR+G ++E
Sbjct: 297 NINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKE 356
Query: 328 ACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCS 384
A + I +MP+EPDV+IW +LLS R+ G + E A+ + L+ SG +VLLSN+Y
Sbjct: 357 AESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAK 416
Query: 385 LKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQR 444
W + +R+ M++ G+ K G S++E+ +H+F D+S E + I+ +L+ ++QR
Sbjct: 417 TGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQR 476
Query: 445 AKFDG 449
+ G
Sbjct: 477 LREAG 481
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 286 bits (733), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/442 (35%), Positives = 252/442 (57%), Gaps = 7/442 (1%)
Query: 15 LIHGAIKFGSLSESWSITQ--RSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHG 72
+I +FG + E++ + + + S+ + D + ++ + + + LI +
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 73 YATYPSLVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAGECDIARKVFD 130
L+ AL++ YA +A F + V + F ++ K G D A+ +FD
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302
Query: 131 KMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCN 190
+ +D+V W T+I YV++ + LR+F M + ++PD + SV++ CA LG L
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362
Query: 191 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAV 250
AKWVH + ++ ++ AL++MYAKCG +D ++ VF+ + R +V W++MIN L++
Sbjct: 363 AKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSM 422
Query: 251 HGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLE 310
HG A DA+++F+RM+ ENV P+ +TFVG+L CSH GLV EG++ F M + + I P+LE
Sbjct: 423 HGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLE 482
Query: 311 HYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRL 370
HYG MVDL GRA L EA +I++MPV +VVIW +L+SACRIHG+ EL +FA I L
Sbjct: 483 HYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILEL 542
Query: 371 E---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQS 427
E G VL+SN+Y + W + +R +M+ V K++G S I+ H+F D+
Sbjct: 543 EPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKR 602
Query: 428 HAEMKAIHRVLEGLIQRAKFDG 449
H + I+ L+ ++ + K G
Sbjct: 603 HKQSNEIYAKLDEVVSKLKLAG 624
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 145/315 (46%), Gaps = 38/315 (12%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D F + ++ G + AR VFD+M RDVVTWNT+I Y + + +LF M
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMK 204
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYA------ 218
+ V PD ++V+ C R G + + ++ ++E V+++ L ALV MYA
Sbjct: 205 DSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMD 264
Query: 219 -------------------------KCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGL 253
KCGR+D ++ +FD + + W MI+
Sbjct: 265 MAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDY 324
Query: 254 ALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR-EHFNIMQNRFLIQPQLEHY 312
+A+ VF M + PD ++ ++ AC++ G++++ + H I N ++ +L
Sbjct: 325 PQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG--LESELSIN 382
Query: 313 GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE--LAEFAIANISRL 370
++++ + G L+ ++ + MP +VV W ++++A +HG+ L+ FA +
Sbjct: 383 NALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGEASDALSLFARMKQENV 441
Query: 371 ESGDFVLLSNMY-CS 384
E + + +Y CS
Sbjct: 442 EPNEVTFVGVLYGCS 456
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 10/238 (4%)
Query: 171 DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF 230
D F+F ++ +++ AL +HG+ + + + +DMYA CGRI+ ++ VF
Sbjct: 110 DQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVF 169
Query: 231 DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVN 290
D ++ V WN MI GL +A +F M+ NV+PD + I+ AC G +
Sbjct: 170 DEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMR 229
Query: 291 EGREHFN-IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 349
R + +++N + L +V + AG ++ A + M V ++ + A++S
Sbjct: 230 YNRAIYEFLIENDVRMDTHL--LTALVTMYAGAGCMDMAREFFRKMSVR-NLFVSTAMVS 286
Query: 350 ACRIHGKKELAEFAIANISRLESGDFVLLSNM---YCSLKNWHNAERVRNMMKIGGVR 404
G+ + A+ + E D V + M Y A RV M G++
Sbjct: 287 GYSKCGRLDDAQVI---FDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIK 341
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/388 (39%), Positives = 232/388 (59%), Gaps = 9/388 (2%)
Query: 54 ASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNL 111
++ + TT + HA++ GY V +LI++YA +AH +F R+ D S N
Sbjct: 129 SAFEETT--QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS 186
Query: 112 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 171
VI+ +KAG+ DIA +F KM ++ ++W T+I GYV+ + L+LF M +++VEPD
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPD 246
Query: 172 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 231
+ A+ ++ CA+LGAL KW+H + + R++++ +L L+DMYAKCG ++ + +VF
Sbjct: 247 NVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFK 306
Query: 232 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 291
+ + V W A+I+G A HG +AI+ F M+ + P+ ITF +L ACS+ GLV E
Sbjct: 307 NIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEE 366
Query: 292 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 351
G+ F M+ + ++P +EHYG +VDLLGRAG L+EA I+ MP++P+ VIW ALL AC
Sbjct: 367 GKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKAC 426
Query: 352 RIHGK----KELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKR 407
RIH +E+ E IA I G +V +N++ K W A R +MK GV K
Sbjct: 427 RIHKNIELGEEIGEILIA-IDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVP 485
Query: 408 GKSWIELGDSIHQFNAADQSHAEMKAIH 435
G S I L + H+F A D+SH E++ I
Sbjct: 486 GCSTISLEGTTHEFLAGDRSHPEIEKIQ 513
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 35/263 (13%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
A+ VFD D WN +I G+ + L L++ ML + + +TF S++ C+
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 185 LGALCNAKWVHG----------------LMLEKRVKLNYILSAALVDM------------ 216
L A +H L+ V N+ L+ L D
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 217 ---YAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDS 273
Y K G++D++ +F +A + W MI+G + +A+ +F M+ +V PD+
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 274 ITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMI 332
++ L AC+ G + +G+ H + + R + L ++D+ + G +EEA +
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLG--CVLIDMYAKCGEMEEALEVF 305
Query: 333 KAMPVEPDVVIWRALLSACRIHG 355
K + + V W AL+S HG
Sbjct: 306 KNIK-KKSVQAWTALISGYAYHG 327
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/402 (37%), Positives = 237/402 (58%), Gaps = 12/402 (2%)
Query: 58 STTAAK-THAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIE 114
ST + K H ++ G P + L+ YA+ A VF R+ + S +I
Sbjct: 141 STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMIT 200
Query: 115 SLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS-AEVEPDGF 173
K G + AR +FD M RD+V+WN +I GY ++ D L LF+ +L+ + +PD
Sbjct: 201 CYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEI 260
Query: 174 TFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV 233
T + ++ C+++GAL +W+H + R++LN + L+DMY+KCG ++ + VF+
Sbjct: 261 TVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDT 320
Query: 234 ARDHVSVWNAMINGLAVHGLALDAIAVFSRME-VENVLPDSITFVGILKACSHCGLVNEG 292
R + WNAMI G A+HG + DA+ +F+ M+ + + P ITF+G L+AC+H GLVNEG
Sbjct: 321 PRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEG 380
Query: 293 REHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACR 352
F M + I+P++EHYG +V LLGRAG L+ A IK M ++ D V+W ++L +C+
Sbjct: 381 IRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCK 440
Query: 353 IHGK----KELAEFAIA-NISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKR 407
+HG KE+AE+ I NI SG +VLLSN+Y S+ ++ +VRN+MK G+ K+
Sbjct: 441 LHGDFVLGKEIAEYLIGLNIK--NSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEP 498
Query: 408 GKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
G S IE+ + +H+F A D+ H++ K I+ +L + +R K G
Sbjct: 499 GISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHG 540
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 281 bits (720), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 243/417 (58%), Gaps = 18/417 (4%)
Query: 41 DHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVF 100
+H ++ VL+ + + + H L G+ Y + AL+ +YA ++H
Sbjct: 125 NHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASS----VSHITL 180
Query: 101 SR-VMDTFS-KNLVIESLM-----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRF 153
+R + D S +N+V + M ++G+ A +F+ MP RDV +WN ++ +N F
Sbjct: 181 ARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLF 240
Query: 154 LDGLRLFRGMLS-AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAA 212
L+ + LFR M++ + P+ T V++ CA+ G L AK +H + + + +S +
Sbjct: 241 LEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNS 300
Query: 213 LVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM---EVENV 269
LVD+Y KCG ++ + VF ++ ++ WN+MIN A+HG + +AIAVF M + ++
Sbjct: 301 LVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDI 360
Query: 270 LPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEAC 329
PD ITF+G+L AC+H GLV++GR +F++M NRF I+P++EHYG ++DLLGRAG +EA
Sbjct: 361 KPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEAL 420
Query: 330 NMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLK 386
++ M ++ D IW +LL+AC+IHG +LAE A+ N+ L G +++N+Y +
Sbjct: 421 EVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMG 480
Query: 387 NWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQ 443
NW A R R M+K K G S IE+ + +HQF + D+SH E + I+ +L+ LI
Sbjct: 481 NWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLIS 537
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 281 bits (719), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 213/344 (61%), Gaps = 5/344 (1%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N++I+ M+ G+C AR +FDKM R VV+WNT+I GY N F D + +FR M ++
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIR 271
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
P+ T SV+ +RLG+L +W+H + ++++ +L +AL+DMY+KCG I+ + V
Sbjct: 272 PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHV 331
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 289
F+ + R++V W+AMING A+HG A DAI F +M V P + ++ +L ACSH GLV
Sbjct: 332 FERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLV 391
Query: 290 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 349
EGR +F+ M + ++P++EHYG MVDLLGR+G L+EA I MP++PD VIW+ALL
Sbjct: 392 EEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLG 451
Query: 350 ACRIHGKKELAEFAIANI----SRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRK 405
ACR+ G E+ + +ANI +SG +V LSNMY S NW +R MK +RK
Sbjct: 452 ACRMQGNVEMGK-RVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRK 510
Query: 406 KRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
G S I++ +H+F D SH + K I+ +L + + + G
Sbjct: 511 DPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAG 554
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 136/284 (47%), Gaps = 50/284 (17%)
Query: 121 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNV--RFLDGLRLFRGMLSAE-VEPDGFTFAS 177
+ D A K+F++MP R+ +WNT+I G+ ++ + L + LF M+S E VEP+ FTF S
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG---------------- 221
V+ CA+ G + K +HGL L+ + + + LV MY CG
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 222 --------------------RID---------VSKQVFDTVARDHVSVWNAMINGLAVHG 252
ID ++ +FD + + V WN MI+G +++G
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 253 LALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHY 312
DA+ VF M+ ++ P+ +T V +L A S G + G E ++ I+
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLG 312
Query: 313 GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
++D+ + G +E+A ++ + +P E +V+ W A+++ IHG+
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRE-NVITWSAMINGFAIHGQ 355
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 92/230 (40%), Gaps = 36/230 (15%)
Query: 102 RVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR 161
R+ D L I+ K G + A VF+++P +V+TW+ +I G+ + + D + F
Sbjct: 306 RIDDVLGSAL-IDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFC 364
Query: 162 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 221
M A V P + +++T C+ HG ++E+ G
Sbjct: 365 KMRQAGVRPSDVAYINLLTACS-----------HGGLVEE-------------------G 394
Query: 222 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
R S+ V + + M++ L GL +A M ++ PD + + +L
Sbjct: 395 RRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIK---PDDVIWKALLG 451
Query: 282 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM 331
AC G V G+ NI+ + ++ Y + ++ GN E M
Sbjct: 452 ACRMQGNVEMGKRVANILMD--MVPHDSGAYVALSNMYASQGNWSEVSEM 499
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 279 bits (713), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 149/387 (38%), Positives = 230/387 (59%), Gaps = 6/387 (1%)
Query: 65 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGEC 122
H ++ +G+ ++ ++ ALI Y +CH+ A +F R+ + + N ++ ++ GE
Sbjct: 360 HGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEV 419
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-VEPDGFTFASVVTG 181
D A + F+ MP +++V+WNT+I G V+ F + + +F M S E V DG T S+ +
Sbjct: 420 DAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASA 479
Query: 182 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 241
C LGAL AKW++ + + ++L+ L LVDM+++CG + + +F+++ VS W
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 539
Query: 242 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 301
A I +A+ G A AI +F M + + PD + FVG L ACSH GLV +G+E F M
Sbjct: 540 TAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK 599
Query: 302 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAE 361
+ P+ HYG MVDLLGRAG LEEA +I+ MP+EP+ VIW +LL+ACR+ G E+A
Sbjct: 600 LHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAA 659
Query: 362 FAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSI 418
+A I L +G +VLLSN+Y S W++ +VR MK G+RK G S I++
Sbjct: 660 YAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKT 719
Query: 419 HQFNAADQSHAEMKAIHRVLEGLIQRA 445
H+F + D+SH EM I +L+ + QRA
Sbjct: 720 HEFTSGDESHPEMPNIEAMLDEVSQRA 746
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 112/201 (55%), Gaps = 2/201 (0%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D F +N ++ + GE D ARKVFD+M R+VV+W ++I GY + D + LF M+
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 165 -SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
EV P+ T V++ CA+L L + V+ + +++N ++ +ALVDMY KC I
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
DV+K++FD ++ + NAM + GL +A+ VF+ M V PD I+ + + +C
Sbjct: 288 DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 284 SHCGLVNEGRE-HFNIMQNRF 303
S + G+ H +++N F
Sbjct: 348 SQLRNILWGKSCHGYVLRNGF 368
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 92/163 (56%), Gaps = 1/163 (0%)
Query: 140 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 199
+N+LI GY + + + LF M+++ + PD +TF ++ CA+ A N +HGL++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 200 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIA 259
+ + + +LV YA+CG +D +++VFD ++ +V W +MI G A A DA+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 260 VFSRM-EVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 301
+F RM E V P+S+T V ++ AC+ + G + + ++N
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 278 bits (712), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 149/387 (38%), Positives = 230/387 (59%), Gaps = 6/387 (1%)
Query: 65 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGEC 122
H ++ +G+ ++ ++ ALI Y +CH+ A +F R+ + + N ++ ++ GE
Sbjct: 360 HGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEV 419
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-VEPDGFTFASVVTG 181
D A + F+ MP +++V+WNT+I G V+ F + + +F M S E V DG T S+ +
Sbjct: 420 DAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASA 479
Query: 182 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 241
C LGAL AKW++ + + ++L+ L LVDM+++CG + + +F+++ VS W
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 539
Query: 242 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 301
A I +A+ G A AI +F M + + PD + FVG L ACSH GLV +G+E F M
Sbjct: 540 TAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK 599
Query: 302 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAE 361
+ P+ HYG MVDLLGRAG LEEA +I+ MP+EP+ VIW +LL+ACR+ G E+A
Sbjct: 600 LHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAA 659
Query: 362 FAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSI 418
+A I L +G +VLLSN+Y S W++ +VR MK G+RK G S I++
Sbjct: 660 YAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKT 719
Query: 419 HQFNAADQSHAEMKAIHRVLEGLIQRA 445
H+F + D+SH EM I +L+ + QRA
Sbjct: 720 HEFTSGDESHPEMPNIEAMLDEVSQRA 746
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 112/201 (55%), Gaps = 2/201 (0%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D F +N ++ + GE D ARKVFD+M R+VV+W ++I GY + D + LF M+
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 165 -SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
EV P+ T V++ CA+L L + V+ + +++N ++ +ALVDMY KC I
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
DV+K++FD ++ + NAM + GL +A+ VF+ M V PD I+ + + +C
Sbjct: 288 DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 284 SHCGLVNEGRE-HFNIMQNRF 303
S + G+ H +++N F
Sbjct: 348 SQLRNILWGKSCHGYVLRNGF 368
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 92/163 (56%), Gaps = 1/163 (0%)
Query: 140 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 199
+N+LI GY + + + LF M+++ + PD +TF ++ CA+ A N +HGL++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 200 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIA 259
+ + + +LV YA+CG +D +++VFD ++ +V W +MI G A A DA+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 260 VFSRM-EVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 301
+F RM E V P+S+T V ++ AC+ + G + + ++N
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 276 bits (707), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 234/395 (59%), Gaps = 23/395 (5%)
Query: 75 TYPSLV--AALISTYARCHQPH--IAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFD 130
T+P ++ A I ++ Q H I H F D + N +I G D+ARKVFD
Sbjct: 153 TFPFVLKACAYIFGFSEGKQVHCQIVKHGFGG--DVYVNNGLIHLYGSCGCLDLARKVFD 210
Query: 131 KMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCN 190
+MP R +V+WN++I V+ + L+LFR M + EPDG+T SV++ CA LG+L
Sbjct: 211 EMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSL 269
Query: 191 AKWVHGLMLEK---RVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMING 247
W H +L K V ++ ++ +L++MY KCG + +++QVF + + ++ WNAMI G
Sbjct: 270 GTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILG 329
Query: 248 LAVHGLALDAIAVFSRM--EVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLI 305
A HG A +A+ F RM + ENV P+S+TFVG+L AC+H G VN+GR++F++M + I
Sbjct: 330 FATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCI 389
Query: 306 QPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK-ELAEFAI 364
+P LEHYG +VDL+ RAG + EA +M+ +MP++PD VIWR+LL AC G EL+E
Sbjct: 390 EPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIA 449
Query: 365 ANISRLE----------SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIEL 414
NI + SG +VLLS +Y S W++ VR +M G+RK+ G S IE+
Sbjct: 450 RNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEI 509
Query: 415 GDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
H+F A D SH + K I++ L+ + R + G
Sbjct: 510 NGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIG 544
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 121 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNV-RFLDGLRLFRGMLS-AEVEPDGFTFASV 178
+ + A +VFD + WNTLI +V R + L+R ML E PD TF V
Sbjct: 98 DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFV 157
Query: 179 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 238
+ CA + K VH +++ + ++ L+ +Y CG +D++++VFD + +
Sbjct: 158 LKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSL 217
Query: 239 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 298
WN+MI+ L G A+ +F M+ + PD T +L AC+ G ++ G
Sbjct: 218 VSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAF 276
Query: 299 MQNRFLIQPQLEHY--GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
+ + + ++ +++++ + G+L A + + M + D+ W A++ HG+
Sbjct: 277 LLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGR 335
Query: 357 KELA 360
E A
Sbjct: 336 AEEA 339
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 275 bits (703), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 223/395 (56%), Gaps = 5/395 (1%)
Query: 60 TAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLM 117
T + H I G+ P + LIS YA H VF+ + D + ++ +
Sbjct: 126 TGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACA 185
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
+ G+ ARK+F+ MP RD + WN +I GY + + L +F M V+ +G S
Sbjct: 186 RCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMIS 245
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 237
V++ C +LGAL +W H + ++K+ L+ LVD+YAKCG ++ + +VF + +
Sbjct: 246 VLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKN 305
Query: 238 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 297
V W++ +NGLA++G + +FS M+ + V P+++TFV +L+ CS G V+EG+ HF+
Sbjct: 306 VYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFD 365
Query: 298 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 357
M+N F I+PQLEHYG +VDL RAG LE+A ++I+ MP++P +W +LL A R++
Sbjct: 366 SMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNL 425
Query: 358 ELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIEL 414
EL A + LE+ G +VLLSN+Y +W N VR MK GVRK+ G S +E+
Sbjct: 426 ELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEV 485
Query: 415 GDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
+H+F D+SH + I V + + +R + G
Sbjct: 486 NGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAG 520
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 275 bits (702), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 225/368 (61%), Gaps = 7/368 (1%)
Query: 83 LISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGECDIARKVFDKMPV--RDVV 138
++ YARC + A +F ++ + T S + ++ KAG+ ++AR +FDKMP+ ++VV
Sbjct: 222 MLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVV 281
Query: 139 TWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLM 198
TW +I GY + + RL M+++ ++ D S++ C G L +H ++
Sbjct: 282 TWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSIL 341
Query: 199 LEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAI 258
+ N + AL+DMYAKCG + + VF+ + + + WN M++GL VHG +AI
Sbjct: 342 KRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAI 401
Query: 259 AVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDL 318
+FSRM E + PD +TF+ +L +C+H GL++EG ++F M+ + + PQ+EHYG +VDL
Sbjct: 402 ELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDL 461
Query: 319 LGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRL---ESGDF 375
LGR G L+EA +++ MP+EP+VVIW ALL ACR+H + ++A+ + N+ +L + G++
Sbjct: 462 LGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNY 521
Query: 376 VLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIH 435
LLSN+Y + ++W +R+ MK GV K G S +EL D IH+F D+SH + I+
Sbjct: 522 SLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIY 581
Query: 436 RVLEGLIQ 443
++L LI+
Sbjct: 582 QMLGSLIE 589
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 137/325 (42%), Gaps = 43/325 (13%)
Query: 30 SITQRSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYAR 89
S+ R+ ++ +F LQ + + HA++I + LIS +
Sbjct: 4 SLPVRAPSWVSSRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSL 63
Query: 90 CHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVK 149
C Q ++A VF++V + +V N+LI + +
Sbjct: 64 CRQTNLAVRVFNQVQEP-----------------------------NVHLCNSLIRAHAQ 94
Query: 150 NVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYIL 209
N + +F M + D FT+ ++ C+ L K +H + + + + +
Sbjct: 95 NSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYV 154
Query: 210 SAALVDMYAKCGRIDV--SKQVFDTVA-RDHVSVWNAMINGLAVHGLALDAIAVFSRMEV 266
AL+D Y++CG + V + ++F+ ++ RD VS WN+M+ GL G DA +F M
Sbjct: 155 PNALIDCYSRCGGLGVRDAMKLFEKMSERDTVS-WNSMLGGLVKAGELRDARRLFDEMPQ 213
Query: 267 ENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLE 326
D I++ +L + C +++ E F M R + + TMV +AG++E
Sbjct: 214 R----DLISWNTMLDGYARCREMSKAFELFEKMPERNTVS-----WSTMVMGYSKAGDME 264
Query: 327 EACNMIKAMPVEP-DVVIWRALLSA 350
A M MP+ +VV W +++
Sbjct: 265 MARVMFDKMPLPAKNVVTWTIIIAG 289
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 274 bits (701), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 150/372 (40%), Positives = 215/372 (57%), Gaps = 6/372 (1%)
Query: 75 TYPSLVAALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGECDIARKVFDKM 132
T P LV AL+ +++C H A +F + S +I + G D++RK+FD M
Sbjct: 291 TIP-LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDM 349
Query: 133 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 192
+DVV WN +IGG V+ R D L LF+ M ++ +PD T ++ C++LGAL
Sbjct: 350 EEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI 409
Query: 193 WVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHG 252
W+H + + + LN L +LVDMYAKCG I + VF + + + A+I GLA+HG
Sbjct: 410 WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHG 469
Query: 253 LALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHY 312
A AI+ F+ M + PD ITF+G+L AC H G++ GR++F+ M++RF + PQL+HY
Sbjct: 470 DASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHY 529
Query: 313 GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRL-- 370
MVDLLGRAG LEEA ++++MP+E D +W ALL CR+HG EL E A + L
Sbjct: 530 SIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDP 589
Query: 371 -ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHA 429
+SG +VLL MY W +A+R R MM GV K G S IE+ + +F D+S
Sbjct: 590 SDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRP 649
Query: 430 EMKAIHRVLEGL 441
E + I+ L L
Sbjct: 650 ESEKIYDRLHCL 661
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 145/323 (44%), Gaps = 43/323 (13%)
Query: 75 TYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSK--NLVIESLMKAGECDIARKVFDKM 132
TYP L I HV ++ S N I G+ + ARKVFD+
Sbjct: 158 TYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDES 217
Query: 133 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 192
PVRD+V+WN LI GY K + +++ M S V+PD T +V+ C+ LG L K
Sbjct: 218 PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGK 277
Query: 193 WVHGLMLEKRVKLNYILSAALVDM-------------------------------YAKCG 221
+ + E +++ L AL+DM YA+CG
Sbjct: 278 EFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCG 337
Query: 222 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
+DVS+++FD + V +WNAMI G DA+A+F M+ N PD IT + L
Sbjct: 338 LLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLS 397
Query: 282 ACSHCGLVNEGREHFNIMQNRFLIQPQLE---HYGT-MVDLLGRAGNLEEACNMIKAMPV 337
ACS G ++ G I +R++ + L GT +VD+ + GN+ EA ++ +
Sbjct: 398 ACSQLGALDVG-----IWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT 452
Query: 338 EPDVVIWRALLSACRIHGKKELA 360
+ + + A++ +HG A
Sbjct: 453 R-NSLTYTAIIGGLALHGDASTA 474
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 160/339 (47%), Gaps = 32/339 (9%)
Query: 103 VMDTFSKNLVIE--SLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLF 160
++D F+ + +I +L ++ D + K+ + ++ +WN I G+ ++ + L+
Sbjct: 82 ILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLY 141
Query: 161 RGML---SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMY 217
+ ML E PD FT+ + CA L + G +L+ R++L + A + M+
Sbjct: 142 KQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMF 201
Query: 218 AKCGRIDVSKQVFD-TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
A CG ++ +++VFD + RD VS WN +ING G A AI V+ ME E V PD +T
Sbjct: 202 ASCGDMENARKVFDESPVRDLVS-WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTM 260
Query: 277 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP 336
+G++ +CS G +N G+E + ++ L + + ++D+ + G++ EA + +
Sbjct: 261 IGLVSSCSMLGDLNRGKEFYEYVKENGL-RMTIPLVNALMDMFSKCGDIHEARRIFDNLE 319
Query: 337 VEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRN 396
+ +V W ++S + + L + + +E D VL W N
Sbjct: 320 -KRTIVSWTTMISG---YARCGLLDVSRKLFDDMEEKDVVL----------W-------N 358
Query: 397 MMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIH 435
M G V+ KRG+ + L + ++ E+ IH
Sbjct: 359 AMIGGSVQAKRGQDALAL---FQEMQTSNTKPDEITMIH 394
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 273 bits (697), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/384 (38%), Positives = 225/384 (58%), Gaps = 5/384 (1%)
Query: 63 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAG 120
+ H +I G + ++ Y C A +F ++ D + N +I K G
Sbjct: 147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCG 206
Query: 121 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 180
D A+ +FD+MP R+ V+WN++I G+V+N RF D L +FR M +V+PDGFT S++
Sbjct: 207 LIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLN 266
Query: 181 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 240
CA LGA +W+H ++ R +LN I+ AL+DMY KCG I+ VF+ + +S
Sbjct: 267 ACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSC 326
Query: 241 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 300
WN+MI GLA +G A+ +FS +E + PDS++F+G+L AC+H G V+ E F +M+
Sbjct: 327 WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
Query: 301 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
+++I+P ++HY MV++LG AG LEEA +IK MPVE D VIW +LLSACR G E+A
Sbjct: 387 EKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
Query: 361 EFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDS 417
+ A + +L E+ +VLLSN Y S + A R +MK + K+ G S IE+
Sbjct: 447 KRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFE 506
Query: 418 IHQFNAADQSHAEMKAIHRVLEGL 441
+H+F + +H + I+ +L+ L
Sbjct: 507 VHEFISCGGTHPKSAEIYSLLDIL 530
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 146/330 (44%), Gaps = 38/330 (11%)
Query: 75 TYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIE-SLMKAGECDIARKVFDKMP 133
TY L+ ST Q H + + DT + + V+ + + A VF ++
Sbjct: 26 TYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRIN 85
Query: 134 VRDVVTWNTLIGGYVKNVRFLDGLRLFRGML--SAEVEPDGFTFASVVTGCARLGALCNA 191
++ WNT+I G+ ++ + +F ML S V+P T+ SV RLG +
Sbjct: 86 HKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDG 145
Query: 192 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 251
+ +HG+++++ ++ + + ++ MY CG + + ++F + V WN+MI G A
Sbjct: 146 RQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKC 205
Query: 252 GLA-------------------------------LDAIAVFSRMEVENVLPDSITFVGIL 280
GL DA+ +F M+ ++V PD T V +L
Sbjct: 206 GLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLL 265
Query: 281 KACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEP 339
AC++ G +GR H I++NRF + + ++D+ + G +EE N+ + P +
Sbjct: 266 NACAYLGASEQGRWIHEYIVRNRFELNSIV--VTALIDMYCKCGCIEEGLNVFECAP-KK 322
Query: 340 DVVIWRALLSACRIHGKKELAEFAIANISR 369
+ W +++ +G +E A + + R
Sbjct: 323 QLSCWNSMILGLANNGFEERAMDLFSELER 352
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 272 bits (695), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 230/390 (58%), Gaps = 13/390 (3%)
Query: 70 VHGYA----TYPSL--VAALISTYARCHQPHIAHHVFS--RVMDTFSKNLVIESLMKAGE 121
VH Y T PSL AL++ YA C + IA +F + D S +++ ++ G
Sbjct: 258 VHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGN 317
Query: 122 CDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTG 181
+AR FD+MPVRD ++W +I GY++ F + L +FR M SA + PD FT SV+T
Sbjct: 318 LKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTA 377
Query: 182 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF-DTVARDHVSV 240
CA LG+L +W+ + + ++K + ++ AL+DMY KCG + +++VF D RD +
Sbjct: 378 CAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFT- 436
Query: 241 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 300
W AM+ GLA +G +AI VF +M+ ++ PD IT++G+L AC+H G+V++ R+ F M+
Sbjct: 437 WTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMR 496
Query: 301 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
+ I+P L HYG MVD+LGRAG ++EA +++ MP+ P+ ++W ALL A R+H + +A
Sbjct: 497 SDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMA 556
Query: 361 EFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDS 417
E A I LE + + LL N+Y K W + VR + ++K G S IE+
Sbjct: 557 ELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGF 616
Query: 418 IHQFNAADQSHAEMKAIHRVLEGLIQRAKF 447
H+F A D+SH + + I+ LE L Q + F
Sbjct: 617 AHEFVAGDKSHLQSEEIYMKLEELAQESTF 646
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 142/304 (46%), Gaps = 14/304 (4%)
Query: 64 THAKLIVHGYATYPSLVAALIST--YARCHQPHIAHHVFSRVMDTFSKNLVIESLMK-AG 120
T + I + Y+ + S++ +T + + H I V TF K L + + G
Sbjct: 25 TITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPN--PTFQKKLFVFWCSRLGG 82
Query: 121 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 180
A K+F K+P DVV WN +I G+ K +G+RL+ ML V PD TF ++
Sbjct: 83 HVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLN 142
Query: 181 GCARLG-ALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS 239
G R G AL K +H +++ + N + ALV MY+ CG +D+++ VFD ++ V
Sbjct: 143 GLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVF 202
Query: 240 VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC---GLVNEGREHF 296
WN MI+G ++I + ME V P S+T + +L ACS L E+
Sbjct: 203 SWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYV 262
Query: 297 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
+ + +P L +V+ G ++ A + ++M DV+ W +++ G
Sbjct: 263 SECKT----EPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVERGN 317
Query: 357 KELA 360
+LA
Sbjct: 318 LKLA 321
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
+ + +N +++ G D+AR VFD+ DV +WN +I GY + + + + L M
Sbjct: 169 NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME 228
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
V P T V++ C+++ K VH + E + + + L ALV+ YA CG +D
Sbjct: 229 RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMD 288
Query: 225 VSKQVFDTV-ARDHVS------------------------------VWNAMINGLAVHGL 253
++ ++F ++ ARD +S W MI+G G
Sbjct: 289 IAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGC 348
Query: 254 ALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG 313
+++ +F M+ ++PD T V +L AC+H G + G E ++ I+ +
Sbjct: 349 FNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG-EWIKTYIDKNKIKNDVVVGN 407
Query: 314 TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
++D+ + G E+A + M + D W A++ +G+ + A
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDMD-QRDKFTWTAMVVGLANNGQGQEA 453
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/383 (38%), Positives = 229/383 (59%), Gaps = 9/383 (2%)
Query: 73 YATYPSLVAALISTYARCHQPHIAHHVFS--RVMDTFSKNLVIESLMKAGECDIARKVFD 130
Y++ L AL+ Y +C + +A F + D S N ++ ++ G+ + A+ VFD
Sbjct: 265 YSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFD 324
Query: 131 KMPVRDVVTWNTLIGGYVKNVRFLDGLR-LFRGMLSAE-VEPDGFTFASVVTGCARLGAL 188
+MP RD+V+WN+L+ GY K +R LF M E V+PD T S+++G A G L
Sbjct: 325 QMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGEL 384
Query: 189 CNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGL 248
+ +WVHGL++ ++K + LS+AL+DMY KCG I+ + VF T V++W +MI GL
Sbjct: 385 SHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGL 444
Query: 249 AVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQ 308
A HG A+ +F RM+ E V P+++T + +L ACSH GLV EG FN M+++F P+
Sbjct: 445 AFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPE 504
Query: 309 LEHYGTMVDLLGRAGNLEEACNMI-KAMPVEPDVVIWRALLSACRIHGKKELAEFAIANI 367
EHYG++VDLL RAG +EEA +++ K MP+ P +W ++LSACR E AE A+ +
Sbjct: 505 TEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTEL 564
Query: 368 SRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAA 424
+LE G +VLLSN+Y ++ W +++ R M+ GV+K G S + + +H+F AA
Sbjct: 565 LKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAA 624
Query: 425 D-QSHAEMKAIHRVLEGLIQRAK 446
+ Q+H I R+L+ L K
Sbjct: 625 EKQNHPRWTEIKRILQHLYNEMK 647
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 134/287 (46%), Gaps = 39/287 (13%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N +++ M+ G +A KVF +MP DV ++N +I GY K L+ L+L+ M+S +E
Sbjct: 170 NSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIE 229
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKL---NYILSAALVDMYAKCGRIDVS 226
PD +T S++ C L + K VHG +E+R + N ILS AL+DMY KC ++
Sbjct: 230 PDEYTVLSLLVCCGHLSDIRLGKGVHG-WIERRGPVYSSNLILSNALLDMYFKCKESGLA 288
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRME--------------------- 265
K+ FD + + + WN M+ G G A AVF +M
Sbjct: 289 KRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQ 348
Query: 266 ------------VENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG 313
VE V PD +T V ++ ++ G ++ GR ++ R ++
Sbjct: 349 RTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVI-RLQLKGDAFLSS 407
Query: 314 TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
++D+ + G +E A M+ E DV +W ++++ HG + A
Sbjct: 408 ALIDMYCKCGIIERAF-MVFKTATEKDVALWTSMITGLAFHGNGQQA 453
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 122/285 (42%), Gaps = 42/285 (14%)
Query: 100 FSRVMDTF--SKNLVIESLMKAGECDIARKVF-DKMPVRDVVTWNTLIGGYVKNVRFLDG 156
F+ + DTF S+ + ++ D+A+ +F + P +V +NT+I + G
Sbjct: 60 FNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKNECFG 119
Query: 157 LRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHG-LMLEKRVKLNYILSAALVD 215
L + M+ V PD TF ++ + L + K +H +++ + L L +LV
Sbjct: 120 L--YSSMIRHRVSPDRQTFLYLMKASSFLSEV---KQIHCHIIVSGCLSLGNYLWNSLVK 174
Query: 216 MYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSIT 275
Y + G V+++VF + VS +N MI G A G +L+A+ ++ +M + + PD T
Sbjct: 175 FYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYT 234
Query: 276 FVGILKACSHCGLVNEGREHFNIMQNRFLI------------------------------ 305
+ +L C H + G+ ++ R +
Sbjct: 235 VLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDA 294
Query: 306 --QPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 348
+ + + TMV R G++E A + MP + D+V W +LL
Sbjct: 295 MKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP-KRDLVSWNSLL 338
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 211/349 (60%), Gaps = 5/349 (1%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D + + +++ K+ + + +VF ++ RD ++WN+L+ GYV+N R+ + LRLFR M+
Sbjct: 276 DVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMV 335
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
+A+V+P F+SV+ CA L L K +HG +L N +++ALVDMY+KCG I
Sbjct: 336 TAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIK 395
Query: 225 VSKQVFDTV-ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
++++FD + D VS W A+I G A+HG +A+++F M+ + V P+ + FV +L AC
Sbjct: 396 AARKIFDRMNVLDEVS-WTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTAC 454
Query: 284 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 343
SH GLV+E +FN M + + +LEHY + DLLGRAG LEEA N I M VEP +
Sbjct: 455 SHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV 514
Query: 344 WRALLSACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKI 400
W LLS+C +H ELAE I ++S G +VL+ NMY S W ++R M+
Sbjct: 515 WSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRK 574
Query: 401 GGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
G+RKK SWIE+ + H F + D+SH M I+ L+ ++++ + +G
Sbjct: 575 KGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEG 623
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 171/334 (51%), Gaps = 13/334 (3%)
Query: 31 ITQRSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYAR- 89
+ R+S DH+VF VL+ MD H ++ G AL++ YA+
Sbjct: 94 VEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKL 153
Query: 90 ------CHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTL 143
++ + R ++ +++ E+ + D R+VF+ MP +DVV++NT+
Sbjct: 154 LGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTI 213
Query: 144 IGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRV 203
I GY ++ + D LR+ R M + +++PD FT +SV+ + + K +HG ++ K +
Sbjct: 214 IAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGI 273
Query: 204 KLNYILSAALVDMYAKCGRIDVSKQVFDTV-ARDHVSVWNAMINGLAVHGLALDAIAVFS 262
+ + ++LVDMYAK RI+ S++VF + RD +S WN+++ G +G +A+ +F
Sbjct: 274 DSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS-WNSLVAGYVQNGRYNEALRLFR 332
Query: 263 RMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGR 321
+M V P ++ F ++ AC+H ++ G++ H +++ F + +VD+ +
Sbjct: 333 QMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF--GSNIFIASALVDMYSK 390
Query: 322 AGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
GN++ A + M V D V W A++ +HG
Sbjct: 391 CGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHG 423
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 268 bits (685), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 148/407 (36%), Positives = 234/407 (57%), Gaps = 14/407 (3%)
Query: 57 DSTTAAKTHAKLIVHGYATYPSL-------VAALISTYARCHQPHIAHHVFSRVMD--TF 107
D T+ ++ L+ HGYA L A+I Y++ + A VF + D +
Sbjct: 83 DFTSGSEALGDLL-HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSV 141
Query: 108 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 167
+ N +I+ M++G+ D A K+FDKMP RD+++W +I G+VK + L FR M +
Sbjct: 142 TWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISG 201
Query: 168 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 227
V+PD + + C LGAL WVH +L + K N +S +L+D+Y +CG ++ ++
Sbjct: 202 VKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFAR 261
Query: 228 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 287
QVF + + V WN++I G A +G A +++ F +M+ + PD++TF G L ACSH G
Sbjct: 262 QVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVG 321
Query: 288 LVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 347
LV EG +F IM+ + I P++EHYG +VDL RAG LE+A ++++MP++P+ V+ +L
Sbjct: 322 LVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSL 381
Query: 348 LSACRIHGKK-ELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGV 403
L+AC HG LAE + +++ L ++V+LSNMY + W A ++R MK G+
Sbjct: 382 LAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGL 441
Query: 404 RKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDGC 450
+K+ G S IE+ D +H F A D +H E I VLE + + GC
Sbjct: 442 KKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGC 488
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 107/250 (42%), Gaps = 44/250 (17%)
Query: 137 VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARL--GALCNAKWV 194
V+W + I +N R + + F M A VEP+ TF ++++GC G+ +
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 195 HGL-------------------MLEKRVKL-------------NYILSAALVDMYAKCGR 222
HG M KR + N + ++D Y + G+
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 223 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
+D + ++FD + + W AMING G +A+ F M++ V PD + + L A
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 283 CSHCGLVNEGREHFNIMQNRFLIQPQLEH----YGTMVDLLGRAGNLEEACNMIKAMPVE 338
C++ G ++ F + +R+++ ++ +++DL R G +E A + M +
Sbjct: 216 CTNLGALS-----FGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME-K 269
Query: 339 PDVVIWRALL 348
VV W +++
Sbjct: 270 RTVVSWNSVI 279
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 268 bits (684), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 148/406 (36%), Positives = 236/406 (58%), Gaps = 7/406 (1%)
Query: 41 DHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVF 100
D F VL+ + D + H +++V G+ + +V LI Y C A +F
Sbjct: 115 DTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMF 174
Query: 101 SRVM--DTFSKNLVIESLMKAGECDIARKVFDKMP--VRDVVTWNTLIGGYVKNVRFLDG 156
++ D N ++ K GE D AR + + MP VR+ V+W +I GY K+ R +
Sbjct: 175 DEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEA 234
Query: 157 LRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDM 216
+ +F+ ML VEPD T +V++ CA LG+L + + + + + L+ A++DM
Sbjct: 235 IEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDM 294
Query: 217 YAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
YAK G I + VF+ V +V W +I GLA HG +A+A+F+RM V P+ +TF
Sbjct: 295 YAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTF 354
Query: 277 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP 336
+ IL ACSH G V+ G+ FN M++++ I P +EHYG M+DLLGRAG L EA +IK+MP
Sbjct: 355 IAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMP 414
Query: 337 VEPDVVIWRALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAER 393
+ + IW +LL+A +H EL E A++ + +LE SG+++LL+N+Y +L W +
Sbjct: 415 FKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRM 474
Query: 394 VRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLE 439
+RNMMK GV+K G+S IE+ + +++F + D +H +++ IH +L+
Sbjct: 475 MRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQ 520
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 48/300 (16%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLD-------GL 157
D + IE+ AG A VF P + NT+I + + LD +
Sbjct: 46 DNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMI----RALSLLDEPNAHSIAI 101
Query: 158 RLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMY 217
++R + + +PD FTF V+ R+ + + +HG ++ + + L+ MY
Sbjct: 102 TVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMY 161
Query: 218 AKCGRIDVSKQVFDTVARDHVSVWNAM--------------------------------- 244
CG + ++++FD + V+VWNA+
Sbjct: 162 FSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCV 221
Query: 245 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 304
I+G A G A +AI VF RM +ENV PD +T + +L AC+ G + G + + +R +
Sbjct: 222 ISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGM 281
Query: 305 IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS--ACRIHGKKELAEF 362
+ ++D+ ++GN+ +A ++ + + E +VV W +++ A HG + LA F
Sbjct: 282 -NRAVSLNNAVIDMYAKSGNITKALDVFECVN-ERNVVTWTTIIAGLATHGHGAEALAMF 339
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/360 (39%), Positives = 208/360 (57%), Gaps = 6/360 (1%)
Query: 82 ALISTYARCHQPHIAHHVF--SRVMDTFSKNLVIESLMKAGECDIARKVFDKMPV-RDVV 138
A+IS Y C A H F + V + +I MKA + ++A +F M V +++V
Sbjct: 191 AMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLV 250
Query: 139 TWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLM 198
TWN +I GYV+N R DGL+LFR ML + P+ +S + GC+ L AL + +H ++
Sbjct: 251 TWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV 310
Query: 199 LEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAI 258
+ + + +L+ MY KCG + + ++F+ + + V WNAMI+G A HG A A+
Sbjct: 311 SKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKAL 370
Query: 259 AVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDL 318
+F M + PD ITFV +L AC+H GLVN G +F M + ++PQ +HY MVDL
Sbjct: 371 CLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDL 430
Query: 319 LGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGD---F 375
LGRAG LEEA +I++MP P ++ LL ACR+H ELAEFA + +L S + +
Sbjct: 431 LGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGY 490
Query: 376 VLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIH 435
V L+N+Y S W + RVR MK V K G SWIE+ + +H F ++D+ H E+ +IH
Sbjct: 491 VQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 143/319 (44%), Gaps = 16/319 (5%)
Query: 45 FHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM 104
++++ R S D A + + T+ SL+ + +R + AH +F +
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMME---AHQLFDEIP 120
Query: 105 --DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
DTFS N+++ ++ + A+ FD+MP +D +WNT+I GY + LF
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
M+ E + ++ ++++G G L A + + V + A++ Y K +
Sbjct: 181 MM----EKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGV----VAWTAMITGYMKAKK 232
Query: 223 IDVSKQVF-DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
+++++ +F D ++ WNAMI+G + D + +F M E + P+S L
Sbjct: 233 VELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALL 292
Query: 282 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 341
CS + GR+ I+ L + +++ + + G L +A + + M + DV
Sbjct: 293 GCSELSALQLGRQIHQIVSKSTLCN-DVTALTSLISMYCKCGELGDAWKLFEVMK-KKDV 350
Query: 342 VIWRALLSACRIHGKKELA 360
V W A++S HG + A
Sbjct: 351 VAWNAMISGYAQHGNADKA 369
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 265 bits (677), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 131/378 (34%), Positives = 225/378 (59%), Gaps = 6/378 (1%)
Query: 78 SLVAALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPVR 135
+L A++ Y +C A +F + D + +++ + + + AR+V + MP +
Sbjct: 268 TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK 327
Query: 136 DVVTWNTLIGGYVKNVRFLDGLRLFRGM-LSAEVEPDGFTFASVVTGCARLGALCNAKWV 194
D+V WN LI Y +N + + L +F + L ++ + T S ++ CA++GAL +W+
Sbjct: 328 DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWI 387
Query: 195 HGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLA 254
H + + +++N+ +++AL+ MY+KCG ++ S++VF++V + V VW+AMI GLA+HG
Sbjct: 388 HSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCG 447
Query: 255 LDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGT 314
+A+ +F +M+ NV P+ +TF + ACSH GLV+E F+ M++ + I P+ +HY
Sbjct: 448 NEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC 507
Query: 315 MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLES-- 372
+VD+LGR+G LE+A I+AMP+ P +W ALL AC+IH LAE A + LE
Sbjct: 508 IVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRN 567
Query: 373 -GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEM 431
G VLLSN+Y L W N +R M++ G++K+ G S IE+ IH+F + D +H
Sbjct: 568 DGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMS 627
Query: 432 KAIHRVLEGLIQRAKFDG 449
+ ++ L ++++ K +G
Sbjct: 628 EKVYGKLHEVMEKLKSNG 645
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 129/255 (50%), Gaps = 5/255 (1%)
Query: 108 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS-A 166
SK + +L + ARKVFD++P + WNTLI Y + + F M+S +
Sbjct: 66 SKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSES 125
Query: 167 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
+ P+ +TF ++ A + +L + +HG+ ++ V + ++ +L+ Y CG +D +
Sbjct: 126 QCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSA 185
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 286
+VF T+ V WN+MING G A+ +F +ME E+V +T VG+L AC+
Sbjct: 186 CKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI 245
Query: 287 GLVNEGREHFN-IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
+ GR+ + I +NR + L + M+D+ + G++E+A + AM E D V W
Sbjct: 246 RNLEFGRQVCSYIEENRVNVNLTLAN--AMLDMYTKCGSIEDAKRLFDAME-EKDNVTWT 302
Query: 346 ALLSACRIHGKKELA 360
+L I E A
Sbjct: 303 TMLDGYAISEDYEAA 317
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 139/283 (49%), Gaps = 34/283 (12%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D F N +I G+ D A KVF + +DVV+WN++I G+V+ L LF+ M
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
S +V+ T V++ CA++ L + V + E RV +N L+ A++DMY KCG I+
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 225 VSKQVFDTV-ARDHVS------------------------------VWNAMINGLAVHGL 253
+K++FD + +D+V+ WNA+I+ +G
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
Query: 254 ALDAIAVFSRMEVE-NVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHY 312
+A+ VF ++++ N+ + IT V L AC+ G + GR + ++ + I+
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK-KHGIRMNFHVT 403
Query: 313 GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
++ + + G+LE++ + ++ + DV +W A++ +HG
Sbjct: 404 SALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG 445
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 264 bits (675), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 135/339 (39%), Positives = 202/339 (59%), Gaps = 4/339 (1%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D F + +++ K D A+KVFD+MP R+VVTW LI GYV++ F G+ +F ML
Sbjct: 239 DVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEML 298
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
++V P+ T +SV++ CA +GAL + VH M++ +++N L+D+Y KCG ++
Sbjct: 299 KSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLE 358
Query: 225 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
+ VF+ + +V W AMING A HG A DA +F M +V P+ +TF+ +L AC+
Sbjct: 359 EAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA 418
Query: 285 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 344
H GLV EGR F M+ RF ++P+ +HY MVDL GR G LEEA +I+ MP+EP V+W
Sbjct: 419 HGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVW 478
Query: 345 RALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIG 401
AL +C +H EL ++A + + +L+ SG + LL+N+Y +NW RVR MK
Sbjct: 479 GALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQ 538
Query: 402 GVRKKRGKSWIELGDSIHQFNAADQSHA-EMKAIHRVLE 439
V K G SWIE+ + +F A D E +++ L+
Sbjct: 539 QVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLD 577
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 140/286 (48%), Gaps = 10/286 (3%)
Query: 75 TYPSLVAALISTYARCHQPHIAH-HV--FSRVMDTFSKNLVIESLMKAGECDIARKVFDK 131
T+P L+ A+ R P H H+ F D F +N +I +G D A ++FD
Sbjct: 106 TFPPLLKAVFKL--RDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDG 163
Query: 132 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA 191
+DVVTW +I G+V+N + + F M V + T SV+ ++ +
Sbjct: 164 AEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFG 223
Query: 192 KWVHGLMLEK-RVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAV 250
+ VHGL LE RVK + + ++LVDMY KC D +++VFD + +V W A+I G
Sbjct: 224 RSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQ 283
Query: 251 HGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQL 309
+ VF M +V P+ T +L AC+H G ++ GR H +++N I+
Sbjct: 284 SRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNS--IEINT 341
Query: 310 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
T++DL + G LEEA + + + E +V W A+++ HG
Sbjct: 342 TAGTTLIDLYVKCGCLEEAILVFERLH-EKNVYTWTAMINGFAAHG 386
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 108/254 (42%), Gaps = 4/254 (1%)
Query: 99 VFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLR 158
+F D F L+ A + AR++ ++ + W++LIG + + L
Sbjct: 29 IFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLS 88
Query: 159 L--FRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDM 216
+R M V P TF ++ +L N H +++ + + + +L+
Sbjct: 89 FLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLISG 147
Query: 217 YAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
Y+ G D + ++FD V W AMI+G +G A +A+ F M+ V + +T
Sbjct: 148 YSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTV 207
Query: 277 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP 336
V +LKA V GR + ++ + ++VD+ G+ ++A + MP
Sbjct: 208 VSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP 267
Query: 337 VEPDVVIWRALLSA 350
+VV W AL++
Sbjct: 268 SR-NVVTWTALIAG 280
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 122/276 (44%), Gaps = 46/276 (16%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
++T + +I+ +K G + A VF+++ ++V TW +I G+ + D LF M
Sbjct: 339 INTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTM 398
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
LS+ V P+ TF +V++ CA HG ++E+ +L LS GR
Sbjct: 399 LSSHVSPNEVTFMAVLSACA-----------HGGLVEEGRRL--FLSMK--------GRF 437
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
++ + DH + M++ GL +A A+ RM +E P ++ + + +C
Sbjct: 438 NMEPKA------DH---YACMVDLFGRKGLLEEAKALIERMPME---PTNVVWGALFGSC 485
Query: 284 SHCGLVNEGREHFNIMQNRFLIQPQLEH---YGTMVDLLGRAGNLEEACNMIKAMPVEPD 340
L+++ E +R +I+ Q H Y + +L + N +E + K M +
Sbjct: 486 ----LLHKDYELGKYAASR-VIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQM--KDQ 538
Query: 341 VVIWRALLSACRIHGKKELAEF-AIANISRLESGDF 375
V+ S + GK L EF A + LES D
Sbjct: 539 QVVKSPGFSWIEVKGK--LCEFIAFDDKKPLESDDL 572
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 135/343 (39%), Positives = 199/343 (58%), Gaps = 3/343 (0%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N +I K E D A +F K+ R +V+WN +I G+ +N R +D L F M S V+
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK 435
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
PD FT+ SV+T A L +AKW+HG+++ + N ++ ALVDMYAKCG I +++ +
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 289
FD ++ HV+ WNAMI+G HG A+ +F M+ + P+ +TF+ ++ ACSH GLV
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555
Query: 290 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 349
G + F +M+ + I+ ++HYG MVDLLGRAG L EA + I MPV+P V ++ A+L
Sbjct: 556 EAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
Query: 350 ACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKK 406
AC+IH AE A + L D VLL+N+Y + W +VR M G+RK
Sbjct: 616 ACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKT 675
Query: 407 RGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
G S +E+ + +H F + +H + K I+ LE LI K G
Sbjct: 676 PGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAG 718
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 123/244 (50%), Gaps = 2/244 (0%)
Query: 112 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 171
+++ K G + AR++FD M R+VV+WN++I YV+N + + +F+ ML V+P
Sbjct: 277 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 336
Query: 172 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 231
+ + CA LG L +++H L +E + N + +L+ MY KC +D + +F
Sbjct: 337 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 396
Query: 232 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 291
+ + WNAMI G A +G +DA+ FS+M V PD+ T+V ++ A + + +
Sbjct: 397 KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHH 456
Query: 292 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 351
+ ++ R + + +VD+ + G + A +I M E V W A++
Sbjct: 457 AKWIHGVVM-RSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGY 514
Query: 352 RIHG 355
HG
Sbjct: 515 GTHG 518
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 102/190 (53%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
+D F+ + K + + ARKVFD+MP RD+V+WNT++ GY +N L + + M
Sbjct: 168 LDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM 227
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
++P T SV+ + L + K +HG + +S ALVDMYAKCG +
Sbjct: 228 CEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSL 287
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
+ ++Q+FD + +V WN+MI+ + +A+ +F +M E V P ++ +G L AC
Sbjct: 288 ETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHAC 347
Query: 284 SHCGLVNEGR 293
+ G + GR
Sbjct: 348 ADLGDLERGR 357
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 126/246 (51%), Gaps = 6/246 (2%)
Query: 107 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 166
F + ++ + G D A +VF+ + + V ++T++ G+ K L+ F M
Sbjct: 70 FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD 129
Query: 167 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
+VEP + F ++ C L K +HGL+++ L+ L +MYAKC +++ +
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 286
++VFD + + WN ++ G + +G+A A+ + M EN+ P IT V +L A S
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 287 GLVNEGRE-HFNIMQNRFLIQPQLEHYGT-MVDLLGRAGNLEEACNMIKAMPVEPDVVIW 344
L++ G+E H M++ F L + T +VD+ + G+LE A + M +E +VV W
Sbjct: 250 RLISVGKEIHGYAMRSGF---DSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSW 305
Query: 345 RALLSA 350
+++ A
Sbjct: 306 NSMIDA 311
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 4/181 (2%)
Query: 75 TYPSLVAALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGECDIARKVFDKM 132
TY S++ A+ H I V +D F +++ K G IAR +FD M
Sbjct: 440 TYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM 499
Query: 133 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 192
R V TWN +I GY + L LF M ++P+G TF SV++ C+ G +
Sbjct: 500 SERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGL 559
Query: 193 WVHGLMLEK-RVKLNYILSAALVDMYAKCGRIDVSKQ-VFDTVARDHVSVWNAMINGLAV 250
+M E ++L+ A+VD+ + GR++ + + + V+V+ AM+ +
Sbjct: 560 KCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI 619
Query: 251 H 251
H
Sbjct: 620 H 620
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/440 (34%), Positives = 243/440 (55%), Gaps = 11/440 (2%)
Query: 15 LIHGAIKFGSLSESWSITQRSSHS--LTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHG 72
+I G + G ++ S+ R H+ L D+ V VL+ + D + HA+++ G
Sbjct: 98 MIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLK----ACDLKVCREIHAQVLKLG 153
Query: 73 YATYPSLVAALISTYARCHQPHIAHHVFSRVMDT--FSKNLVIESLMKAGECDIARKVFD 130
+ + S+ ++ Y + + A +F + D + ++I + G A ++F
Sbjct: 154 FGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQ 213
Query: 131 KMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCN 190
+ ++D V W +I G V+N L LFR M V + FT V++ C+ LGAL
Sbjct: 214 DVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALEL 273
Query: 191 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAV 250
+WVH + +R++L+ + AL++MY++CG I+ +++VF + V +N MI+GLA+
Sbjct: 274 GRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAM 333
Query: 251 HGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLE 310
HG +++AI F M P+ +T V +L ACSH GL++ G E FN M+ F ++PQ+E
Sbjct: 334 HGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIE 393
Query: 311 HYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRL 370
HYG +VDLLGR G LEEA I+ +P+EPD ++ LLSAC+IHG EL E +
Sbjct: 394 HYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFES 453
Query: 371 E---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQS 427
E SG +VLLSN+Y S W + +R M+ G+ K+ G S IE+ + IH+F D +
Sbjct: 454 ENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIA 513
Query: 428 HAEMKAIHRVLEGLIQRAKF 447
H +AI++ L+ L + +F
Sbjct: 514 HPHKEAIYQRLQELNRILRF 533
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 142/315 (45%), Gaps = 51/315 (16%)
Query: 82 ALISTYARCHQPHIAH--HVFSRVMDTFSKN--LVIESLMKA----GECDIARKVFDKMP 133
LIS C +IAH + ++++ TF V+ L++ D A VF +
Sbjct: 31 TLISVLRSCK--NIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVS 88
Query: 134 VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC----------- 182
+V + +I G+V + R DG+ L+ M+ V PD + SV+ C
Sbjct: 89 NPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQ 148
Query: 183 --------------------ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
+ G L NAK + M ++ +++ + +++ Y++CG
Sbjct: 149 VLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDR----DHVAATVMINCYSECGF 204
Query: 223 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
I + ++F V W AMI+GL + A+ +F M++ENV + T V +L A
Sbjct: 205 IKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSA 264
Query: 283 CSHCGLVNEGREHFNIMQNRFLIQPQLEHY--GTMVDLLGRAGNLEEACNMIKAMPVEPD 340
CS G + GR + ++N+ + +L ++ ++++ R G++ EA + + M + D
Sbjct: 265 CSDLGALELGRWVHSFVENQRM---ELSNFVGNALINMYSRCGDINEARRVFRVMR-DKD 320
Query: 341 VVIWRALLSACRIHG 355
V+ + ++S +HG
Sbjct: 321 VISYNTMISGLAMHG 335
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/327 (39%), Positives = 192/327 (58%), Gaps = 3/327 (0%)
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
K E + ARK+FD+ P + + +WN +I GY +N D + LFR M +E P+ T
Sbjct: 366 KLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITC 425
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 237
+++ CA+LGAL KWVH L+ + + +S AL+ MYAKCG I ++++FD + + +
Sbjct: 426 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485
Query: 238 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 297
WN MI+G +HG +A+ +F M + P +TF+ +L ACSH GLV EG E FN
Sbjct: 486 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 545
Query: 298 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 357
M +R+ +P ++HY MVD+LGRAG+L+ A I+AM +EP +W LL ACRIH
Sbjct: 546 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDT 605
Query: 358 ELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIEL 414
LA + L+ G VLLSN++ + +N+ A VR K + K G + IE+
Sbjct: 606 NLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEI 665
Query: 415 GDSIHQFNAADQSHAEMKAIHRVLEGL 441
G++ H F + DQSH ++K I+ LE L
Sbjct: 666 GETPHVFTSGDQSHPQVKEIYEKLEKL 692
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 116/243 (47%), Gaps = 5/243 (2%)
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
K G+ + +F + D+V +N +I GY N L LF+ ++ + T S
Sbjct: 268 KCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVS 327
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 237
+V G L +HG L+ + +S AL +Y+K I+ ++++FD
Sbjct: 328 LVPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKS 384
Query: 238 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 297
+ WNAMI+G +GL DAI++F M+ P+ +T IL AC+ G ++ G+ +
Sbjct: 385 LPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD 444
Query: 298 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 357
++++ + + ++ + + G++ EA + M + + V W ++S +HG+
Sbjct: 445 LVRSTDF-ESSIYVSTALIGMYAKCGSIAEARRLFDLM-TKKNEVTWNTMISGYGLHGQG 502
Query: 358 ELA 360
+ A
Sbjct: 503 QEA 505
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 121/265 (45%), Gaps = 9/265 (3%)
Query: 112 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-VEP 170
+++ K + ARKVFD+MP +D + WNT+I GY KN +++ +++FR +++
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 171 DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF 230
D T ++ A L L +H L + + + + +Y+KCG+I + +F
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF 279
Query: 231 DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVN 290
+ + +NAMI+G +G ++++F + + S T V ++ H L+
Sbjct: 280 REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY 339
Query: 291 EGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
H +++ FL + T V + +E A + P E + W A++S
Sbjct: 340 A--IHGYCLKSNFLSHASVSTALTTV--YSKLNEIESARKLFDESP-EKSLPSWNAMISG 394
Query: 351 CRIHGKKELAEFAIANISRLESGDF 375
+G L E AI+ ++ +F
Sbjct: 395 YTQNG---LTEDAISLFREMQKSEF 416
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 127/301 (42%), Gaps = 33/301 (10%)
Query: 62 AKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGE 121
A+THA++I+HG+ SL+ L + L G
Sbjct: 37 AQTHAQIILHGFRNDISLLTKLT-----------------------------QRLSDLGA 67
Query: 122 CDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML-SAEVEPDGFTFASVVT 180
AR +F + DV +N L+ G+ N L +F + S +++P+ T+A ++
Sbjct: 68 IYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAIS 127
Query: 181 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 240
+ + +HG + +L + +V MY K R++ +++VFD + +
Sbjct: 128 AASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTIL 187
Query: 241 WNAMINGLAVHGLALDAIAVFSRMEVENVLP-DSITFVGILKACSHCGLVNEGREHFNIM 299
WN MI+G + + +++I VF + E+ D+ T + IL A + + G + ++
Sbjct: 188 WNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLA 247
Query: 300 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKEL 359
G + L + G ++ + + +PD+V + A++ +G+ EL
Sbjct: 248 TKTGCYSHDYVLTG-FISLYSKCGKIKMGSALFREFR-KPDIVAYNAMIHGYTSNGETEL 305
Query: 360 A 360
+
Sbjct: 306 S 306
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 262 bits (669), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 142/392 (36%), Positives = 224/392 (57%), Gaps = 8/392 (2%)
Query: 65 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGEC 122
H++ G+ + LI+ YA+ A VF + D N +I + G+
Sbjct: 105 HSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDM 164
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM-LSAEVEPDGFTFASVVTG 181
A ++FD MP ++V +W T+I G+ +N + + L++F M V+P+ T SV+
Sbjct: 165 KAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPA 224
Query: 182 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD-HVSV 240
CA LG L + + G E N + A ++MY+KCG IDV+K++F+ + ++
Sbjct: 225 CANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCS 284
Query: 241 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 300
WN+MI LA HG +A+ +F++M E PD++TFVG+L AC H G+V +G+E F M+
Sbjct: 285 WNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSME 344
Query: 301 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
I P+LEHYG M+DLLGR G L+EA ++IK MP++PD V+W LL AC HG E+A
Sbjct: 345 EVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
Query: 361 EFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSW-IELGD 416
E A + +LE G+ V++SN+Y + + W R+R +MK + K G S+ +E+G
Sbjct: 405 EIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGV 464
Query: 417 SIHQFNAADQSHAEMKAIHRVLEGLIQRAKFD 448
+H+F D+SH I++VLE + +R K +
Sbjct: 465 DVHKFTVEDKSHPRSYEIYQVLEEIFRRMKLE 496
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 116/303 (38%), Gaps = 51/303 (16%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D + L+I +L+ ARK+FD +N LI Y + + + + L+ +
Sbjct: 21 DLLQRLLLIPNLV------YARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLS 74
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
+ P TF + A + + +H + + L+ YAK G +
Sbjct: 75 FDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALC 134
Query: 225 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL-------------- 270
+++VFD +++ V VWNAMI G G A+ +F M +NV
Sbjct: 135 CARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGN 194
Query: 271 ------------------PDSITFVGILKACSHCGLVNEGR------EHFNIMQNRFLIQ 306
P+ IT V +L AC++ G + GR N ++
Sbjct: 195 YSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCN 254
Query: 307 PQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIAN 366
+E Y + G ++ A + + + + ++ W +++ + HGK + A A
Sbjct: 255 ATIEMY-------SKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQ 307
Query: 367 ISR 369
+ R
Sbjct: 308 MLR 310
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/406 (36%), Positives = 220/406 (54%), Gaps = 16/406 (3%)
Query: 39 LTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHH 98
+TD + R ++ + S+DS T L + T P + S + +C + +
Sbjct: 137 VTDAAYMFRRMKETGVSVDSVTM------LGLVPLCTVPEYLWLGRSLHGQCVKGGLDSE 190
Query: 99 VFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLR 158
V V+++F I MK G + R++FD+MPV+ ++TWN +I GY +N D L
Sbjct: 191 V--AVLNSF-----ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLE 243
Query: 159 LFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYA 218
L+ M S+ V PD FT SV++ CA LGA V L+ N +S A + MYA
Sbjct: 244 LYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYA 303
Query: 219 KCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVG 278
+CG + ++ VFD + + W AMI +HG+ + +F M + PD FV
Sbjct: 304 RCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVM 363
Query: 279 ILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE 338
+L ACSH GL ++G E F M+ + ++P EHY +VDLLGRAG L+EA I++MPVE
Sbjct: 364 VLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVE 423
Query: 339 PDVVIWRALLSACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVR 395
PD +W ALL AC+IH ++AE A A + E G +VL+SN+Y KN R+R
Sbjct: 424 PDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIR 483
Query: 396 NMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGL 441
MM+ RKK G S++E +H F A D+SH + + +HR+L+ L
Sbjct: 484 VMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 158/355 (44%), Gaps = 39/355 (10%)
Query: 10 IKLQRLIHGAIKFGSLSESWSITQR--SSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAK 67
++L+ L + ++ SES S+ + S S D F +L+ + + + H
Sbjct: 23 VRLRELAYQSL----FSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 78
Query: 68 LIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARK 127
+ G T P ++ ALIS Y +C LV + ARK
Sbjct: 79 VTKGGCETEPFVLTALISMYCKC-------------------GLVAD----------ARK 109
Query: 128 VFDKMPVRD--VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARL 185
VF++ P V +N LI GY N + D +FR M V D T +V C
Sbjct: 110 VFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVP 169
Query: 186 GALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMI 245
L + +HG ++ + + + + MY KCG ++ +++FD + + WNA+I
Sbjct: 170 EYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVI 229
Query: 246 NGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLI 305
+G + +GLA D + ++ +M+ V PD T V +L +C+H G G E ++++ +
Sbjct: 230 SGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV 289
Query: 306 QPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
P + + + R GNL +A + MPV+ +V W A++ +HG E+
Sbjct: 290 -PNVFVSNASISMYARCGNLAKARAVFDIMPVK-SLVSWTAMIGCYGMHGMGEIG 342
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 106/219 (48%), Gaps = 6/219 (2%)
Query: 140 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 199
WN + F + + L+R ML + PD F+F ++ CA L + + +H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 200 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR-DHVSV-WNAMINGLAVHGLALDA 257
+ + + AL+ MY KCG + +++VF+ + +SV +NA+I+G + DA
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 258 IAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMV 316
+F RM+ V DS+T +G++ C+ + GR H ++ + ++ + +
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGG--LDSEVAVLNSFI 198
Query: 317 DLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
+ + G++E + MPV+ ++ W A++S +G
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVK-GLITWNAVISGYSQNG 236
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 212/347 (61%), Gaps = 10/347 (2%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N +I+ K GE + A +F+++P +DV++WNTLIGGY + + L LF+ ML +
Sbjct: 305 NALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 364
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVK---LNYILSAALVDMYAKCGRIDVS 226
P+ T S++ CA LGA+ +W+H + ++KR+K L +L+DMYAKCG I+ +
Sbjct: 365 PNDVTMLSILPACAHLGAIDIGRWIH-VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA 423
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 286
QVF+++ +S WNAMI G A+HG A + +FSRM + PD ITFVG+L ACSH
Sbjct: 424 HQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHS 483
Query: 287 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 346
G+++ GR F M + + P+LEHYG M+DLLG +G +EA MI M +EPD VIW +
Sbjct: 484 GMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCS 543
Query: 347 LLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGV 403
LL AC++HG EL E N+ ++E G +VLLSN+Y S W+ + R ++ G+
Sbjct: 544 LLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGM 603
Query: 404 RKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEG---LIQRAKF 447
+K G S IE+ +H+F D+ H + I+ +LE L+++A F
Sbjct: 604 KKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGF 650
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 158/323 (48%), Gaps = 4/323 (1%)
Query: 39 LTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHH 98
L + F VL+ S + H ++ G + +LIS Y + + AH
Sbjct: 131 LPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHK 190
Query: 99 VFSRVM--DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDG 156
VF + D S +I+ G + A+K+FD++PV+DVV+WN +I GY + + +
Sbjct: 191 VFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEA 250
Query: 157 LRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDM 216
L LF+ M+ V PD T +VV+ CA+ G++ + VH + + N + AL+D+
Sbjct: 251 LELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDL 310
Query: 217 YAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
Y+KCG ++ + +F+ + V WN +I G L +A+ +F M P+ +T
Sbjct: 311 YSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 370
Query: 277 VGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 335
+ IL AC+H G ++ GR H I + + +++D+ + G++E A + ++
Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Query: 336 PVEPDVVIWRALLSACRIHGKKE 358
+ + W A++ +HG+ +
Sbjct: 431 -LHKSLSSWNAMIFGFAMHGRAD 452
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 122/258 (47%), Gaps = 35/258 (13%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
A VF + +++ WNT+ G+ + + L+L+ M+S + P+ +TF V+ CA+
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD-TVARDHVSV--- 240
A + +HG +L+ L+ + +L+ MY + GR++ + +VFD + RD VS
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 241 ---------------------------WNAMINGLAVHGLALDAIAVFSRMEVENVLPDS 273
WNAMI+G A G +A+ +F M NV PD
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 274 ITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMI 332
T V ++ AC+ G + GR+ H I + F L+ ++DL + G LE AC +
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGF--GSNLKIVNALIDLYSKCGELETACGLF 324
Query: 333 KAMPVEPDVVIWRALLSA 350
+ +P + DV+ W L+
Sbjct: 325 ERLPYK-DVISWNTLIGG 341
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 142/392 (36%), Positives = 220/392 (56%), Gaps = 17/392 (4%)
Query: 75 TYPSLVAALISTYARCHQPHIAHHVFSRVMDT--FSKNLVIESLMKAGECDIARKVFDKM 132
T +V A + + A + I V R +D F +N +++ + G+ DIA ++F KM
Sbjct: 407 TMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Query: 133 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-----------VEPDGFTFASVVTG 181
RD+VTWNT+I GYV + D L L M + E ++P+ T +++
Sbjct: 467 EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPS 526
Query: 182 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 241
CA L AL K +H ++ + + + +ALVDMYAKCG + +S++VFD + + +V W
Sbjct: 527 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITW 586
Query: 242 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 301
N +I +HG +AI + M V+ V P+ +TF+ + ACSH G+V+EG F +M+
Sbjct: 587 NVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKP 646
Query: 302 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV-IWRALLSACRIHGKKELA 360
+ ++P +HY +VDLLGRAG ++EA ++ MP + + W +LL A RIH E+
Sbjct: 647 DYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIG 706
Query: 361 EFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDS 417
E A N+ +LE + +VLL+N+Y S W A VR MK GVRK+ G SWIE GD
Sbjct: 707 EIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDE 766
Query: 418 IHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
+H+F A D SH + + + LE L +R + +G
Sbjct: 767 VHKFVAGDSSHPQSEKLSGYLETLWERMRKEG 798
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 124/249 (49%), Gaps = 4/249 (1%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
+++F N ++ K G+ ++ + RD+VTWNT++ +N + L+ L R M
Sbjct: 234 LNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREM 293
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEK-RVKLNYILSAALVDMYAKCGR 222
+ VEPD FT +SV+ C+ L L K +H L+ + N + +ALVDMY C +
Sbjct: 294 VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 353
Query: 223 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILK 281
+ ++VFD + + +WNAMI G + + +A+ +F ME +L +S T G++
Sbjct: 354 VLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 413
Query: 282 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 341
AC G + + R L + + T++D+ R G ++ A + M + D+
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ-NTLMDMYSRLGKIDIAMRIFGKME-DRDL 471
Query: 342 VIWRALLSA 350
V W +++
Sbjct: 472 VTWNTMITG 480
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 117/245 (47%), Gaps = 13/245 (5%)
Query: 61 AAKTHAKLIVHG-----YATYPSLVAAL--ISTYARCHQPHIAHHVFSRVMDTFS-KNLV 112
A T+ +IV G YA +P+L+ A+ + Q H + F +D+ + N +
Sbjct: 81 AVLTYVDMIVLGIKPDNYA-FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 113 IESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDG 172
+ K G+ KVFD++ R+ V+WN+LI ++ L FR ML VEP
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 173 FTFASVVTGCARLG---ALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
FT SVVT C+ L L K VH L K +LN + LV MY K G++ SK +
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVL 258
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 289
+ + WN +++ L + L+A+ M +E V PD T +L ACSH ++
Sbjct: 259 LGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEML 318
Query: 290 NEGRE 294
G+E
Sbjct: 319 RTGKE 323
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 133/307 (43%), Gaps = 46/307 (14%)
Query: 140 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 199
W L+ V++ + + + M+ ++PD + F +++ A L + K +H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 200 EKRVKLNYILSA-ALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAI 258
+ ++ + A LV++Y KCG +VFD ++ + WN++I+ L A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 259 AVFSRMEVENVLPDSITFVGILKACSHC----GLVNEGREHFNIMQ----NRFLIQPQLE 310
F M ENV P S T V ++ ACS+ GL+ + H ++ N F+I +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 311 HYGTMVD------LLGRAG------------------NLEEACNMIKAM---PVEPDVVI 343
YG + LLG G L EA ++ M VEPD
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 344 WRALLSACR----IHGKKELAEFAIANISRLESGDFV--LLSNMYCSLKNWHNAERVRNM 397
++L AC + KEL +A+ N S L+ FV L +MYC+ K + RV +
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGS-LDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 398 M---KIG 401
M KIG
Sbjct: 364 MFDRKIG 370
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 109/246 (44%), Gaps = 56/246 (22%)
Query: 38 SLTDHSVFHRVLQRSRASMDSTTAAKT-HAKLIVHGYATYPSLVAALISTYARCHQPHIA 96
SL +S+ + S A++ + K HA I + AT ++ +AL+ YA+C
Sbjct: 512 SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC------ 565
Query: 97 HHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDG 156
G ++RKVFD++P ++V+TWN +I Y + +
Sbjct: 566 -----------------------GCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEA 602
Query: 157 LRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS------ 210
+ L R M+ V+P+ TF SV C+ H M+++ +++ Y++
Sbjct: 603 IDLLRMMMVQGVKPNEVTFISVFAACS-----------HSGMVDEGLRIFYVMKPDYGVE 651
Query: 211 ------AALVDMYAKCGRIDVSKQVFDTVARD--HVSVWNAMINGLAVH-GLALDAIAVF 261
A +VD+ + GRI + Q+ + + RD W++++ +H L + IA
Sbjct: 652 PSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQ 711
Query: 262 SRMEVE 267
+ +++E
Sbjct: 712 NLIQLE 717
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 258 bits (658), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 143/382 (37%), Positives = 222/382 (58%), Gaps = 8/382 (2%)
Query: 67 KLIVHGYATYPSLV--AALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDI 124
+LI T+ SL+ +A +++ Q H + +D F+ + +I+
Sbjct: 448 RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKD 507
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
+R VFD+M V+D+V WN++ GYV+ + L LF + + PD FTFA++VT
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGN 567
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 244
L ++ + H +L++ ++ N ++ AL+DMYAKCG + + + FD+ A V WN++
Sbjct: 568 LASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSV 627
Query: 245 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 304
I+ A HG A+ + +M E + P+ ITFVG+L ACSH GLV +G + F +M RF
Sbjct: 628 ISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFG 686
Query: 305 IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAI 364
I+P+ EHY MV LLGRAG L +A +I+ MP +P ++WR+LLS C G ELAE A
Sbjct: 687 IEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHA- 745
Query: 365 ANISRL----ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQ 420
A ++ L +SG F +LSN+Y S W A++VR MK+ GV K+ G+SWI + +H
Sbjct: 746 AEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHI 805
Query: 421 FNAADQSHAEMKAIHRVLEGLI 442
F + D+SH + I+ VL+ L+
Sbjct: 806 FLSKDKSHCKANQIYEVLDDLL 827
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 146/289 (50%), Gaps = 8/289 (2%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
MD N++I+S +K G A K+F+ MP +++++W TL+ GY +N + + LF M
Sbjct: 282 MDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM 341
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
++PD + +S++T CA L AL VH ++ + + ++ +L+DMYAKC +
Sbjct: 342 SKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCL 401
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLAL---DAIAVFSRMEVENVLPDSITFVGIL 280
+++VFD A V ++NAMI G + G +A+ +F M + P +TFV +L
Sbjct: 402 TDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461
Query: 281 KACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 340
+A + + ++ +M ++ + + ++D+ L+++ + M V+ D
Sbjct: 462 RASASLTSLGLSKQIHGLM-FKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-D 519
Query: 341 VVIWRALLSACRIHGKKE--LAEFAIANISRLESGDFVLLSNMYCSLKN 387
+VIW ++ + + E L F +SR E D +NM + N
Sbjct: 520 LVIWNSMFAGYVQQSENEEALNLFLELQLSR-ERPDEFTFANMVTAAGN 567
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 134/275 (48%), Gaps = 13/275 (4%)
Query: 92 QPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNV 151
Q + F R D + L+I+ +K G D AR VFD +P + VTW T+I G VK
Sbjct: 171 QSFLVKSGFDR--DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 152 RFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSA 211
R L+LF ++ V PDG+ ++V++ C+ L L K +H +L ++++ L
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 212 ALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLP 271
L+D Y KCGR+ + ++F+ + ++ W +++G + L +A+ +F+ M + P
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 272 DSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQL--EHYGT--MVDLLGRAGNLEE 327
D IL +C+ + F + + I+ L + Y T ++D+ + L +
Sbjct: 349 DMYACSSILTSCASLHALG-----FGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTD 403
Query: 328 ACNMIKAMPVEPDVVIWRALLSA-CRIHGKKELAE 361
A + DVV++ A++ R+ + EL E
Sbjct: 404 ARKVFDIFAA-ADVVLFNAMIEGYSRLGTQWELHE 437
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 127/260 (48%), Gaps = 7/260 (2%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVK---NVRFLDGLRLFR 161
D++ N +I+ K ARKVFD DVV +N +I GY + + L +FR
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 162 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 221
M + P TF S++ A L +L +K +HGLM + + L+ +AL+D+Y+ C
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY 503
Query: 222 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
+ S+ VFD + + +WN+M G +A+ +F +++ PD TF ++
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
Query: 282 ACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 340
A + V G+E H +++ P + + ++D+ + G+ E+A + D
Sbjct: 564 AAGNLASVQLGQEFHCQLLKRGLECNPYITN--ALLDMYAKCGSPEDAHKAFDS-AASRD 620
Query: 341 VVIWRALLSACRIHGKKELA 360
VV W +++S+ HG+ + A
Sbjct: 621 VVCWNSVISSYANHGEGKKA 640
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 142/304 (46%), Gaps = 20/304 (6%)
Query: 91 HQPHIAHH---VFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGY 147
H ++ H V+ +DT+ N++I +AG ARKVF+KMP R++V+W+T++
Sbjct: 61 HYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSAC 120
Query: 148 VKNVRFLDGLRLFRGMLSAEVE-PDGFTFASVVTGCARLGALCNAKW----VHGLMLEKR 202
+ + + L +F + P+ + +S + C+ L +W + +++
Sbjct: 121 NHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSG 178
Query: 203 VKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFS 262
+ + L+D Y K G ID ++ VFD + W MI+G G + ++ +F
Sbjct: 179 FDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFY 238
Query: 263 RMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGR 321
++ +NV+PD +L ACS + G++ H +I+ R+ ++ ++D +
Sbjct: 239 QLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL--RYGLEMDASLMNVLIDSYVK 296
Query: 322 AGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGDFVLLSNM 381
G + A + MP +++ W LLS + + + A ++S+ F L +M
Sbjct: 297 CGRVIAAHKLFNGMP-NKNIISWTTLLSGYKQNALHKEAMELFTSMSK-----FGLKPDM 350
Query: 382 Y-CS 384
Y CS
Sbjct: 351 YACS 354
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 80/189 (42%), Gaps = 30/189 (15%)
Query: 65 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDI 124
H +L+ G P + AL+ YA+C P AH
Sbjct: 578 HCQLLKRGLECNPYITNALLDMYAKCGSPEDAH--------------------------- 610
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
K FD RDVV WN++I Y + L++ M+S +EP+ TF V++ C+
Sbjct: 611 --KAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSH 668
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS-VWNA 243
G + + LML ++ +V + + GR++ ++++ + + + VW +
Sbjct: 669 AGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRS 728
Query: 244 MINGLAVHG 252
+++G A G
Sbjct: 729 LLSGCAKAG 737
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 258 bits (658), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 132/323 (40%), Positives = 198/323 (61%), Gaps = 9/323 (2%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
ARKVFD++P DVV W+ L+ GYV+ +GL +FR ML +EPD F+ + +T CA+
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ 230
Query: 185 LGALCNAKWVHGLMLEKR-VKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNA 243
+GAL KW+H + +K ++ + + ALVDMYAKCG I+ + +VF + R +V W A
Sbjct: 231 VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAA 290
Query: 244 MINGLAVHGLALDAIAVFSRMEVEN-VLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 302
+I G A +G A A+ R+E E+ + PDS+ +G+L AC+H G + EGR M+ R
Sbjct: 291 LIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEAR 350
Query: 303 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEF 362
+ I P+ EHY +VDL+ RAG L++A N+I+ MP++P +W ALL+ CR H EL E
Sbjct: 351 YEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 410
Query: 363 AIANISRLESGD-------FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELG 415
A+ N+ LE G+ V LSN+Y S++ A +VR M++ GVRK G S +E+
Sbjct: 411 AVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVD 470
Query: 416 DSIHQFNAADQSHAEMKAIHRVL 438
++ +F + D SH + IH V+
Sbjct: 471 GNVTKFVSGDVSHPNLLQIHTVI 493
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 136/315 (43%), Gaps = 33/315 (10%)
Query: 64 THAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECD 123
TH+ I+HG ++ L++ + H P++ H
Sbjct: 30 THSLFIIHGLHRNTYAISKLLTAFL--HLPNLNKHF-----------------------H 64
Query: 124 IARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE---PDGFTFASVVT 180
A +FD + + + ++T+I ++ + GLR F M+ E E P TF ++
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIV 124
Query: 181 GCARLGALCNAKWVHGLMLEKRVKL-NYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS 239
C + K +H +++ V L + + ++ +Y + + +++VFD + + V
Sbjct: 125 ACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVV 184
Query: 240 VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIM 299
W+ ++NG GL + + VF M V+ + PD + L AC+ G + +G+ +
Sbjct: 185 KWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFV 244
Query: 300 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKEL 359
+ + I+ + +VD+ + G +E A + K + +V W AL+ +G
Sbjct: 245 KKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL-TRRNVFSWAALIGGYAAYG---Y 300
Query: 360 AEFAIANISRLESGD 374
A+ A+ + RLE D
Sbjct: 301 AKKAMTCLERLERED 315
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 14/173 (8%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYV------KNVRFLDGLR 158
D F +++ K G + A +VF K+ R+V +W LIGGY K + L+ L
Sbjct: 253 DVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLE 312
Query: 159 LFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK-WVHGLMLEKRVKLNYILSAALVDMY 217
G ++PD V+ CA G L + + + + + + +VD+
Sbjct: 313 REDG-----IKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLM 367
Query: 218 AKCGRIDVSKQVFDTVA-RDHVSVWNAMINGLAVH-GLALDAIAVFSRMEVEN 268
+ GR+D + + + + + SVW A++NG H + L +AV + +++E
Sbjct: 368 CRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEK 420
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 226/396 (57%), Gaps = 16/396 (4%)
Query: 63 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESL------ 116
+ H+ ++ G+ ++ ALIS Y+RC A + + +K+L IE
Sbjct: 300 QIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQ---RGTKDLKIEGFTALLDG 356
Query: 117 -MKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTF 175
+K G+ + A+ +F + RDVV W +I GY ++ + + + LFR M+ P+ +T
Sbjct: 357 YIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTL 416
Query: 176 ASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-- 233
A++++ + L +L + K +HG ++ + +S AL+ MYAK G I + + FD +
Sbjct: 417 AAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRC 476
Query: 234 ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR 293
RD VS W +MI LA HG A +A+ +F M +E + PD IT+VG+ AC+H GLVN+GR
Sbjct: 477 ERDTVS-WTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGR 535
Query: 294 EHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRI 353
++F++M++ I P L HY MVDL GRAG L+EA I+ MP+EPDVV W +LLSACR+
Sbjct: 536 QYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRV 595
Query: 354 HGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKS 410
H +L + A + LE SG + L+N+Y + W A ++R MK G V+K++G S
Sbjct: 596 HKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFS 655
Query: 411 WIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 446
WIE+ +H F D +H E I+ ++ + K
Sbjct: 656 WIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIK 691
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 164/378 (43%), Gaps = 74/378 (19%)
Query: 48 VLQRS-RASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR--VM 104
+LQ+S S TA H ++I G L+ L++ Y++ A +F +
Sbjct: 19 LLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR 78
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
FS N V+ + K G+ D + FD++P RD V+W T+I GY ++ +R+ M+
Sbjct: 79 TAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMV 138
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
+EP FT +V+ A + K VH +++ ++ N +S +L++MYAKCG
Sbjct: 139 KEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPM 198
Query: 225 VSKQVFD-TVARD----------HVSV--------------------WNAMINGLAVHGL 253
++K VFD V RD H+ V WN+MI+G G
Sbjct: 199 MAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGY 258
Query: 254 ALDAIAVFSRMEVENVL-PDSITFVGILKAC----------------------------- 283
L A+ +FS+M +++L PD T +L AC
Sbjct: 259 DLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLN 318
Query: 284 ------SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV 337
S CG V R +++ R ++E + ++D + G++ +A N+ ++
Sbjct: 319 ALISMYSRCGGVETARR---LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLK- 374
Query: 338 EPDVVIWRALLSACRIHG 355
+ DVV W A++ HG
Sbjct: 375 DRDVVAWTAMIVGYEQHG 392
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 216/367 (58%), Gaps = 11/367 (2%)
Query: 81 AALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVV 138
+++ S YA+ + A +F + D + N++I +K E D AR++FD+ +DVV
Sbjct: 182 SSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVV 241
Query: 139 TWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLM 198
TWN +I GYV + L +F+ M A PD T S+++ CA LG L K +H +
Sbjct: 242 TWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI 301
Query: 199 LE-----KRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGL 253
LE + + + AL+DMYAKCG ID + +VF V +S WN +I GLA+H
Sbjct: 302 LETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH- 360
Query: 254 ALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG 313
A +I +F M+ V P+ +TF+G++ ACSH G V+EGR++F++M++ + I+P ++HYG
Sbjct: 361 AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYG 420
Query: 314 TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFA---IANISRL 370
MVD+LGRAG LEEA +++M +EP+ ++WR LL AC+I+G EL ++A + ++ +
Sbjct: 421 CMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKD 480
Query: 371 ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAE 430
ESGD+VLLSN+Y S W ++VR M V+K G S IE D S E
Sbjct: 481 ESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDKLMMRYLLSSEPE 540
Query: 431 MKAIHRV 437
++ R+
Sbjct: 541 SRSRGRI 547
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 137/305 (44%), Gaps = 39/305 (12%)
Query: 60 TAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKA 119
T + HA ++V+G + S+V LI +S +L + +K
Sbjct: 27 TLKQIHASMVVNGLMSNLSVVGELI----------------------YSASLSVPGALK- 63
Query: 120 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVV 179
A K+FD++P DV N ++ G ++++ + L+ M V PD +TF V+
Sbjct: 64 ----YAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 180 TGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS 239
C++L N HG ++ LN + AL+ +A CG + ++ ++FD A+ H
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 240 VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIM 299
W++M +G A G +A+ +F M + D + + ++ C C ++ RE F
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSARELF--- 232
Query: 300 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSACRIHGK 356
+RF + + + M+ G +EA + K M PDVV +LLSAC + G
Sbjct: 233 -DRF-TEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGD 290
Query: 357 KELAE 361
E +
Sbjct: 291 LETGK 295
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 216/384 (56%), Gaps = 14/384 (3%)
Query: 63 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 122
+ H+ ++ G A+ S+ +LI Y++C A + SR + + +E L
Sbjct: 503 EIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEEL------ 556
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
K+ +K V+WN++I GYV + D LF M+ + PD FT+A+V+ C
Sbjct: 557 ---EKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC 613
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 242
A L + K +H +++K ++ + + + LVDMY+KCG + S+ +F+ R WN
Sbjct: 614 ANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWN 673
Query: 243 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 302
AMI G A HG +AI +F RM +EN+ P+ +TF+ IL+AC+H GL+++G E+F +M+
Sbjct: 674 AMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRD 733
Query: 303 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK-ELAE 361
+ + PQL HY MVD+LG++G ++ A +I+ MP E D VIWR LL C IH E+AE
Sbjct: 734 YGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAE 793
Query: 362 FAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSI 418
A A + RL+ D + LLSN+Y W +R M+ ++K+ G SW+EL D +
Sbjct: 794 EATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDEL 853
Query: 419 HQFNAADQSHAEMKAIHRVLEGLI 442
H F D++H + I+ L GLI
Sbjct: 854 HVFLVGDKAHPRWEEIYEEL-GLI 876
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 135/278 (48%), Gaps = 25/278 (8%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
+D N I+ K A +VFD+M RD V+WN +I + +N + + L LF M
Sbjct: 415 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM 474
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
L + +EPD FTF S++ C G+L +H +++ + N + +L+DMY+KCG I
Sbjct: 475 LRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMI 533
Query: 224 DVSKQVFDT-VARDHVS-------------------VWNAMINGLAVHGLALDAIAVFSR 263
+ ++++ R +VS WN++I+G + + DA +F+R
Sbjct: 534 EEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTR 593
Query: 264 MEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRA 322
M + PD T+ +L C++ G++ H +++ +Q + T+VD+ +
Sbjct: 594 MMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE--LQSDVYICSTLVDMYSKC 651
Query: 323 GNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
G+L ++ M + + D V W A++ HGK E A
Sbjct: 652 GDLHDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEA 688
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 110/224 (49%), Gaps = 2/224 (0%)
Query: 63 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAG 120
+ HA +I+ G+ ++ L+ Y A VF + + D S N +I K+
Sbjct: 69 QAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSN 128
Query: 121 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 180
+ A F+ MPVRDVV+WN+++ GY++N L + +F M +E DG TFA ++
Sbjct: 129 DMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILK 188
Query: 181 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 240
C+ L +HG+++ + + ++AL+DMYAK R S +VF + +
Sbjct: 189 VCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVS 248
Query: 241 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
W+A+I G + L A+ F M+ N + +L++C+
Sbjct: 249 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 116/255 (45%), Gaps = 4/255 (1%)
Query: 127 KVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLG 186
+VF +P ++ V+W+ +I G V+N L+ F+ M +ASV+ CA L
Sbjct: 236 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 295
Query: 187 ALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMIN 246
L +H L+ + I+ A +DMYAKC + ++ +FD + +NAMI
Sbjct: 296 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMIT 355
Query: 247 GLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQ 306
G + A+ +F R+ + D I+ G+ +AC+ ++EG + + + L
Sbjct: 356 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL-S 414
Query: 307 PQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIAN 366
+ +D+ G+ L EA + M D V W A+++A +GK F +
Sbjct: 415 LDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNGKGYETLFLFVS 473
Query: 367 I--SRLESGDFVLLS 379
+ SR+E +F S
Sbjct: 474 MLRSRIEPDEFTFGS 488
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 124/288 (43%), Gaps = 33/288 (11%)
Query: 42 HSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFS 101
S++ VL+ A + + HA + +A + A + YA+C A +F
Sbjct: 281 QSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFD 340
Query: 102 RVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR 161
S+NL +S +N +I GY + L LF
Sbjct: 341 N-----SENLNRQS------------------------YNAMITGYSQEEHGFKALLLFH 371
Query: 162 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 221
++S+ + D + + V CA + L ++GL ++ + L+ ++ A +DMY KC
Sbjct: 372 RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQ 431
Query: 222 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
+ + +VFD + R WNA+I +G + + +F M + PD TF ILK
Sbjct: 432 ALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK 491
Query: 282 ACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEA 328
AC+ G + G E H +I+++ + +++D+ + G +EEA
Sbjct: 492 ACTG-GSLGYGMEIHSSIVKSGMASNSSVG--CSLIDMYSKCGMIEEA 536
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 254 bits (649), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 140/368 (38%), Positives = 208/368 (56%), Gaps = 9/368 (2%)
Query: 82 ALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVT 139
+IS Y A +F ++ D S N V+E G+ + +VFD MP R+V +
Sbjct: 95 TMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFS 154
Query: 140 WNTLIGGYVKNVRFLDGLRLFRGMLS-AEVEPDGFTFASVVTGCARLGALCNAKWVH--G 196
WN LI GY +N R + L F+ M+ V P+ T V++ CA+LGA KWVH G
Sbjct: 155 WNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYG 214
Query: 197 LMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALD 256
L K++ + AL+DMY KCG I+++ +VF + R + WN MINGLA HG +
Sbjct: 215 ETLGYN-KVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTE 273
Query: 257 AIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMV 316
A+ +F M+ + PD +TFVG+L AC H GLV +G +FN M F I P++EH G +V
Sbjct: 274 ALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVV 333
Query: 317 DLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE---SG 373
DLL RAG L +A I MPV+ D VIW LL A +++ K ++ E A+ + +LE
Sbjct: 334 DLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPA 393
Query: 374 DFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKA 433
+FV+LSN+Y + +A R++ M+ G +K+ G SWIE D + +F ++ + H +
Sbjct: 394 NFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEE 453
Query: 434 IHRVLEGL 441
+ R+L L
Sbjct: 454 LQRILREL 461
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 108/233 (46%), Gaps = 12/233 (5%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
A KVF +M ++VV W ++I GY+ N + R F E D + ++++G
Sbjct: 47 ANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYF----DLSPERDIVLWNTMISGYIE 102
Query: 185 LGALCNAKWVHGLMLEKRV-KLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNA 243
+G + A+ + M + V N +L YA G ++ ++VFD + +V WN
Sbjct: 103 MGNMLEARSLFDQMPCRDVMSWNTVLEG-----YANIGDMEACERVFDDMPERNVFSWNG 157
Query: 244 MINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 302
+I G A +G + + F RM E +V+P+ T +L AC+ G + G+ +
Sbjct: 158 LIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETL 217
Query: 303 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
+ + ++D+ G+ G +E A + K + D++ W +++ HG
Sbjct: 218 GYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK-RRDLISWNTMINGLAAHG 269
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 254 bits (649), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 126/324 (38%), Positives = 192/324 (59%), Gaps = 3/324 (0%)
Query: 126 RKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARL 185
+ +F KM + +V+WN +IG Y+KN ++ + L+ M + EPD + SV+ C
Sbjct: 263 KDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDT 322
Query: 186 GALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMI 245
AL K +HG + K++ N +L AL+DMYAKCG ++ ++ VF+ + V W AMI
Sbjct: 323 SALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMI 382
Query: 246 NGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLI 305
+ G DA+A+FS+++ ++PDSI FV L ACSH GL+ EGR F +M + + I
Sbjct: 383 SAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKI 442
Query: 306 QPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIA 365
P+LEH MVDLLGRAG ++EA I+ M +EP+ +W ALL ACR+H ++ A
Sbjct: 443 TPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAAD 502
Query: 366 NISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFN 422
+ +L +SG +VLLSN+Y W +RN+MK G++K G S +E+ IH F
Sbjct: 503 KLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFL 562
Query: 423 AADQSHAEMKAIHRVLEGLIQRAK 446
D+SH + I+R L+ L+++ K
Sbjct: 563 VGDRSHPQSDEIYRELDVLVKKMK 586
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 10/232 (4%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
ARKVFD++P R+V+ N +I YV N + +G+++F M V PD +TF V+ C+
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSC 152
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 244
G + + +HG + + + LV MY KCG + ++ V D ++R V WN++
Sbjct: 153 SGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSL 212
Query: 245 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF- 303
+ G A + DA+ V ME + D+ T +L A S N E+ +++ F
Sbjct: 213 VVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS-----NTTTENVMYVKDMFF 267
Query: 304 -LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV---EPDVVIWRALLSAC 351
+ + L + M+ + + EA + M EPD V ++L AC
Sbjct: 268 KMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 128/270 (47%), Gaps = 38/270 (14%)
Query: 107 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 166
F N ++ K G AR V D+M RDVV+WN+L+ GY +N RF D L + R M S
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESV 235
Query: 167 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
++ D T AS+ L A+ N +M K DM+ K G+
Sbjct: 236 KISHDAGTMASL------LPAVSNTT-TENVMYVK-------------DMFFKMGK---- 271
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 286
+ VS WN MI + + ++A+ ++SRME + PD+++ +L AC
Sbjct: 272 --------KSLVS-WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDT 322
Query: 287 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 346
++ G++ ++ + LI P L ++D+ + G LE+A ++ + M DVV W A
Sbjct: 323 SALSLGKKIHGYIERKKLI-PNLLLENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTA 380
Query: 347 LLSACRIHGKKELAEFAIANISRLESGDFV 376
++SA G+ A+A S+L+ V
Sbjct: 381 MISAYGFSGR---GCDAVALFSKLQDSGLV 407
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 109 KNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV 168
+N +I+ K G + AR VF+ M RDVV+W +I Y + R D + LF + + +
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406
Query: 169 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS--AALVDMYAKCGRI-DV 225
PD F + + C+ G L + LM + K+ L A +VD+ + G++ +
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTD-HYKITPRLEHLACMVDLLGRAGKVKEA 465
Query: 226 SKQVFDTVARDHVSVWNAMINGLAVH 251
+ + D + VW A++ VH
Sbjct: 466 YRFIQDMSMEPNERVWGALLGACRVH 491
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
Query: 192 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 251
+ VH ++ + ++ N L L+ YA + +++VFD + +V + N MI +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 252 GLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEH 311
G + + VF M NV PD TF +LKACS G + GR+ + + + L
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRK-IHGSATKVGLSSTLFV 177
Query: 312 YGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 348
+V + G+ G L EA ++ M DVV W +L+
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLV 213
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/323 (39%), Positives = 198/323 (61%), Gaps = 9/323 (2%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
ARKVFD++P DVV W+ L+ GYV+ +GL +F+ ML +EPD F+ + +T CA+
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQ 230
Query: 185 LGALCNAKWVHGLMLEKR-VKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNA 243
+GAL KW+H + +KR ++ + + ALVDMYAKCG I+ + +VF+ + R +V W A
Sbjct: 231 VGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAA 290
Query: 244 MINGLAVHGLALDAIAVFSRMEVEN-VLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 302
+I G A +G A A R+E E+ + PDS+ +G+L AC+H G + EGR M+ R
Sbjct: 291 LIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEAR 350
Query: 303 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEF 362
+ I P+ EHY +VDL+ RAG L++A ++I+ MP++P +W ALL+ CR H EL E
Sbjct: 351 YGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 410
Query: 363 AIANISRLESGD-------FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELG 415
A+ N+ LE G+ V LSN+Y S++ A +VR M++ G+RK G S +E+
Sbjct: 411 AVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVD 470
Query: 416 DSIHQFNAADQSHAEMKAIHRVL 438
+ +F + D SH + IH ++
Sbjct: 471 GIVTKFVSGDVSHPNLLQIHTLI 493
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 145/343 (42%), Gaps = 34/343 (9%)
Query: 64 THAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECD 123
TH+ I+HG ++ L++ + H P++ H
Sbjct: 30 THSLFIIHGLHRNTYAISKLLTAFL--HLPNLNKHF-----------------------H 64
Query: 124 IARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE---PDGFTFASVVT 180
A +FD + + + ++T+I ++ + GLR F M+ E E P TF ++
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIV 124
Query: 181 GCARLGALCNAKWVHGLMLEKRVKL-NYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS 239
C + K +H +++ V L + + ++ +Y + + +++VFD + + V
Sbjct: 125 ACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVV 184
Query: 240 VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIM 299
W+ ++NG GL + + VF M V + PD + L AC+ G + +G+ +
Sbjct: 185 KWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFV 244
Query: 300 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKEL 359
+ + I+ + +VD+ + G +E A + + + +V W AL+ +G +
Sbjct: 245 KKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL-TRRNVFSWAALIGGYAAYGYAKK 303
Query: 360 AEFAIANISRLESG---DFVLLSNMYCSLKNWHNAERVRNMMK 399
A + I R E G D V+L + + + E R M++
Sbjct: 304 ATTCLDRIER-EDGIKPDSVVLLGVLAACAHGGFLEEGRTMLE 345
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 24/178 (13%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYV------KNVRFLDGLR 158
D F +++ K G + A +VF+K+ R+V +W LIGGY K LD +
Sbjct: 253 DVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIE 312
Query: 159 LFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS------AA 212
G ++PD V+ CA G L + MLE ++ Y ++ +
Sbjct: 313 REDG-----IKPDSVVLLGVLAACAHGGFLEEGR----TMLEN-MEARYGITPKHEHYSC 362
Query: 213 LVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNAMINGLAVH-GLALDAIAVFSRMEVEN 268
+VD+ + GR+D + + + + + SVW A++NG H + L +AV + +++E
Sbjct: 363 IVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEK 420
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 253 bits (647), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 207/375 (55%), Gaps = 9/375 (2%)
Query: 82 ALISTYARCHQPHIAHHVFS----RVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDV 137
A+++ Y + + +A +F R + T+ N +I + G+ A+ +FDKMP RD
Sbjct: 317 AMLAGYVQGERMEMAKELFDVMPCRNVSTW--NTMITGYAQCGKISEAKNLFDKMPKRDP 374
Query: 138 VTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGL 197
V+W +I GY ++ + LRLF M + +F+S ++ CA + AL K +HG
Sbjct: 375 VSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 434
Query: 198 MLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDA 257
+++ + + AL+ MY KCG I+ + +F +A + WN MI G + HG A
Sbjct: 435 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVA 494
Query: 258 IAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVD 317
+ F M+ E + PD T V +L ACSH GLV++GR++F M + + P +HY MVD
Sbjct: 495 LRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVD 554
Query: 318 LLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE---SGD 374
LLGRAG LE+A N++K MP EPD IW LL A R+HG ELAE A I +E SG
Sbjct: 555 LLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGM 614
Query: 375 FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAI 434
+VLLSN+Y S W + ++R M+ GV+K G SWIE+ + H F+ D+ H E I
Sbjct: 615 YVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEI 674
Query: 435 HRVLEGLIQRAKFDG 449
LE L R K G
Sbjct: 675 FAFLEELDLRMKKAG 689
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 142/322 (44%), Gaps = 64/322 (19%)
Query: 84 ISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWN 141
IS+Y R + + A VF R+ + S N +I ++ GE ++ARK+FD+MP RD+V+WN
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWN 130
Query: 142 TLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEK 201
+I GYV+N LF M E D ++ ++++G A+ G + +A+ V M EK
Sbjct: 131 VMIKGYVRNRNLGKARELFEIM----PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK 186
Query: 202 R-VKLNYILSA--------------------------ALVDMYAKCGRIDVSKQVFDTVA 234
V N +LSA L+ + K +I ++Q FD++
Sbjct: 187 NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMN 246
Query: 235 RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE 294
V WN +I G A G +A +F V++V T+ ++ +V E RE
Sbjct: 247 VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF----TWTAMVSGYIQNRMVEEARE 302
Query: 295 HFNIMQNR------------------------FLIQP--QLEHYGTMVDLLGRAGNLEEA 328
F+ M R F + P + + TM+ + G + EA
Sbjct: 303 LFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEA 362
Query: 329 CNMIKAMPVEPDVVIWRALLSA 350
N+ MP + D V W A+++
Sbjct: 363 KNLFDKMP-KRDPVSWAAMIAG 383
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 128/281 (45%), Gaps = 23/281 (8%)
Query: 71 HGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFD 130
HG A + SL A T + + + D N+ I S M+ G C+ A +VF
Sbjct: 32 HGAANFHSLKRA---TQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFK 88
Query: 131 KMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCN 190
+MP V++N +I GY++N F +LF M E D ++ ++ G R L
Sbjct: 89 RMPRWSSVSYNGMISGYLRNGEFELARKLFDEM----PERDLVSWNVMIKGYVRNRNLGK 144
Query: 191 AKWVHGLMLEKRV-KLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLA 249
A+ + +M E+ V N +LS YA+ G +D ++ VFD + + WNA+++
Sbjct: 145 ARELFEIMPERDVCSWNTMLSG-----YAQNGCVDDARSVFDRMPEKNDVSWNALLSAYV 199
Query: 250 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQL 309
+ +A +F E ++ + G +K + E R+ F+ M R ++
Sbjct: 200 QNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKK----IVEARQFFDSMNVRDVVS--- 252
Query: 310 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
+ T++ ++G ++EA + PV+ DV W A++S
Sbjct: 253 --WNTIITGYAQSGKIDEARQLFDESPVQ-DVFTWTAMVSG 290
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/400 (36%), Positives = 228/400 (57%), Gaps = 40/400 (10%)
Query: 81 AALISTYARCHQPHIAHHVFSR---VMDTFSKNLVIESLMKAGE---------------- 121
ALIS Y RC + +A +F + V D N +++ +K+G+
Sbjct: 148 TALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTV 207
Query: 122 ----------CDI-----ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM-LS 165
C+I ARK+FD MP R++V+WNT+IGGY +N + +G+RLF+ M +
Sbjct: 208 ITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQAT 267
Query: 166 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 225
++PD T SV+ + GAL +W H + K++ + A++DMY+KCG I+
Sbjct: 268 TSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEK 327
Query: 226 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 285
+K++FD + V+ WNAMI+G A++G A A+ +F M +E PD IT + ++ AC+H
Sbjct: 328 AKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEK-PDEITMLAVITACNH 386
Query: 286 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
GLV EGR+ F++M+ L ++EHYG MVDLLGRAG+L+EA ++I MP EP+ +I
Sbjct: 387 GGLVEEGRKWFHVMREMGL-NAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILS 445
Query: 346 ALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGG 402
+ LSAC + E AE + LE G++VLL N+Y + K W + V+N+M+
Sbjct: 446 SFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQ 505
Query: 403 VRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLI 442
+K+ G S IE+ + +F + D +H ++IH VL L+
Sbjct: 506 AKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLL 545
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 10/262 (3%)
Query: 100 FSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRL 159
F D + V++ K G+ AR FD+MP R V+W LI GY++ +L
Sbjct: 107 FGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKL 166
Query: 160 FRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK 219
F M + D + +++ G + G + +A+ + M K V I ++ Y
Sbjct: 167 FDQMPHVK---DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTV----ITWTTMIHGYCN 219
Query: 220 CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL-PDSITFVG 278
ID ++++FD + ++ WN MI G + + I +F M+ L PD +T +
Sbjct: 220 IKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILS 279
Query: 279 ILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE 338
+L A S G ++ G E + R + +++ ++D+ + G +E+A + MP E
Sbjct: 280 VLPAISDTGALSLG-EWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMP-E 337
Query: 339 PDVVIWRALLSACRIHGKKELA 360
V W A++ ++G A
Sbjct: 338 KQVASWNAMIHGYALNGNARAA 359
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 116/256 (45%), Gaps = 15/256 (5%)
Query: 98 HVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVR-DVVTWNTLIGGYVKNVRFLDG 156
H + F+K LVI + A ARK+FD+ P R D N++I Y++ ++ D
Sbjct: 4 HAIETNVQIFTKFLVISA--SAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDS 61
Query: 157 LRLFRGMLSAE-VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVD 215
L+R + PD FTF ++ C+ + +H + + +S +VD
Sbjct: 62 FALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVD 121
Query: 216 MYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRME-VENVLPDSI 274
MYAK G++ ++ FD + W A+I+G G A +F +M V++V+ +
Sbjct: 122 MYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNA 181
Query: 275 TFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKA 334
G +K+ G + R F+ M ++ +I + TM+ +++ A + A
Sbjct: 182 MMDGFVKS----GDMTSARRLFDEMTHKTVIT-----WTTMIHGYCNIKDIDAARKLFDA 232
Query: 335 MPVEPDVVIWRALLSA 350
MP E ++V W ++
Sbjct: 233 MP-ERNLVSWNTMIGG 247
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/352 (37%), Positives = 202/352 (57%), Gaps = 13/352 (3%)
Query: 98 HVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGL 157
HV S ++D +++ G D A+ VFD + R+ V+WN LI G+ + L
Sbjct: 197 HVGSALLDLYTR---------YGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKAL 247
Query: 158 RLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMY 217
LF+GML P F++AS+ C+ G L KWVH M++ KL L+DMY
Sbjct: 248 ELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMY 307
Query: 218 AKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFV 277
AK G I ++++FD +A+ V WN+++ A HG +A+ F M + P+ I+F+
Sbjct: 308 AKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFL 367
Query: 278 GILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV 337
+L ACSH GL++EG ++ +M+ ++ P+ HY T+VDLLGRAG+L A I+ MP+
Sbjct: 368 SVLTACSHSGLLDEGWHYYELMKKDGIV-PEAWHYVTVVDLLGRAGDLNRALRFIEEMPI 426
Query: 338 EPDVVIWRALLSACRIHGKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERV 394
EP IW+ALL+ACR+H EL +A ++ L + G V+L N+Y S W++A RV
Sbjct: 427 EPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARV 486
Query: 395 RNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 446
R MK GV+K+ SW+E+ ++IH F A D+ H + + I R E ++ + K
Sbjct: 487 RKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIK 538
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 132/265 (49%), Gaps = 10/265 (3%)
Query: 94 HIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRF 153
HI +F D N ++ K G + ARKVF+KMP RD VTW TLI GY ++ R
Sbjct: 85 HILQSIFRH--DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRP 142
Query: 154 LDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAAL 213
D L F ML P+ FT +SV+ A C +HG ++ N + +AL
Sbjct: 143 CDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSAL 202
Query: 214 VDMYAKCGRIDVSKQVFDTV-ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPD 272
+D+Y + G +D ++ VFD + +R+ VS WNA+I G A A+ +F M + P
Sbjct: 203 LDLYTRYGLMDDAQLVFDALESRNDVS-WNALIAGHARRSGTEKALELFQGMLRDGFRPS 261
Query: 273 SITFVGILKACSHCGLVNEGR--EHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACN 330
++ + ACS G + +G+ + I L+ T++D+ ++G++ +A
Sbjct: 262 HFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA---GNTLLDMYAKSGSIHDARK 318
Query: 331 MIKAMPVEPDVVIWRALLSACRIHG 355
+ + + DVV W +LL+A HG
Sbjct: 319 IFDRL-AKRDVVSWNSLLTAYAQHG 342
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 95/201 (47%), Gaps = 13/201 (6%)
Query: 168 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 227
+ D + +++ C L + VH +L+ + + ++ L++MYAKCG ++ ++
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 228 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 287
+VF+ + + W +I+G + H DA+ F++M P+ T ++KA +
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA--- 172
Query: 288 LVNEGREHFNIMQNRFLIQPQLE---HYGT-MVDLLGRAGNLEEACNMIKAMPVEPDVVI 343
E R + F ++ + H G+ ++DL R G +++A + A+ DV
Sbjct: 173 --AERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS- 229
Query: 344 WRALLSACRIHGKKELAEFAI 364
W AL++ H ++ E A+
Sbjct: 230 WNALIAG---HARRSGTEKAL 247
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/392 (35%), Positives = 210/392 (53%), Gaps = 34/392 (8%)
Query: 63 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 122
+ HA L GY+++ ++ L+ YAR G
Sbjct: 203 EIHAHLTRRGYSSHVYIMTTLVDMYAR-----------------------------FGCV 233
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML--SAEVEPDGFTFASVVT 180
D A VF MPVR+VV+W+ +I Y KN + + LR FR M+ + + P+ T SV+
Sbjct: 234 DYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQ 293
Query: 181 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 240
CA L AL K +HG +L + + + +ALV MY +CG+++V ++VFD + V
Sbjct: 294 ACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVS 353
Query: 241 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 300
WN++I+ VHG AI +F M P +TFV +L ACSH GLV EG+ F M
Sbjct: 354 WNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMW 413
Query: 301 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
I+PQ+EHY MVDLLGRA L+EA M++ M EP +W +LL +CRIHG ELA
Sbjct: 414 RDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473
Query: 361 EFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDS 417
E A + LE +G++VLL+++Y + W +RV+ +++ G++K G+ W+E+
Sbjct: 474 ERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRK 533
Query: 418 IHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
++ F + D+ + M+ IH L L + K G
Sbjct: 534 MYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKG 565
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 119/259 (45%), Gaps = 12/259 (4%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D F +I G D ARKVFDK R + WN L + L L+ M
Sbjct: 111 DPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMN 170
Query: 165 SAEVEPDGFTFASVVTGCA----RLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
VE D FT+ V+ C + L K +H + + + + LVDMYA+
Sbjct: 171 RIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARF 230
Query: 221 GRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM--EVENVLPDSITFVG 278
G +D + VF + +V W+AMI A +G A +A+ F M E ++ P+S+T V
Sbjct: 231 GCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVS 290
Query: 279 ILKACSHCGLVNEGREHFNIMQNRFL--IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP 336
+L+AC+ + +G+ + R L I P + +V + GR G LE + M
Sbjct: 291 VLQACASLAALEQGKLIHGYILRRGLDSILPVI---SALVTMYGRCGKLEVGQRVFDRMH 347
Query: 337 VEPDVVIWRALLSACRIHG 355
+ DVV W +L+S+ +HG
Sbjct: 348 -DRDVVSWNSLISSYGVHG 365
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 124/275 (45%), Gaps = 25/275 (9%)
Query: 91 HQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRD----VVTWNTLIGG 146
H P + + V N + S +K C +A + + ++ N LI
Sbjct: 5 HPPQVIQPTYHTV------NFLPRSPLKPPSCSVA---LNNPSISSGAGAKISNNQLIQS 55
Query: 147 YVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLN 206
K + +R+ LS E P T+ ++ C +L +A VH +L+ +
Sbjct: 56 LCKEGKLKQAIRV----LSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQD 111
Query: 207 YILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEV 266
L+ L+ MY+ G +D +++VFD + + VWNA+ L + G + + ++ +M
Sbjct: 112 PFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNR 171
Query: 267 ENVLPDSITFVGILKAC--SHCGL--VNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGR 321
V D T+ +LKAC S C + + +G+E H ++ + + + T+VD+ R
Sbjct: 172 IGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGY--SSHVYIMTTLVDMYAR 229
Query: 322 AGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
G ++ A + MPV +VV W A+++ +GK
Sbjct: 230 FGCVDYASYVFGGMPVR-NVVSWSAMIACYAKNGK 263
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 226/394 (57%), Gaps = 9/394 (2%)
Query: 65 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAGEC 122
H +I G +++A+I Y + + +F++ +M+ N I L + G
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 123 DIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 178
D A ++F+ + +VV+W ++I G +N + ++ L LFR M A V+P+ T S+
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 179 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 238
+ C + AL + + HG + + N + +AL+DMYAKCGRI++S+ VF+ + ++
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL 454
Query: 239 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 298
WN+++NG ++HG A + +++F + + PD I+F +L AC GL +EG ++F +
Sbjct: 455 VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKM 514
Query: 299 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 358
M + I+P+LEHY MV+LLGRAG L+EA ++IK MP EPD +W ALL++CR+ +
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVD 574
Query: 359 LAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELG 415
LAE A + LE G +VLLSN+Y + W + +RN M+ G++K G SWI++
Sbjct: 575 LAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634
Query: 416 DSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
+ ++ A D+SH ++ I ++ + + + G
Sbjct: 635 NRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSG 668
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 153/401 (38%), Gaps = 91/401 (22%)
Query: 44 VFHRVLQRSRASMDSTTAAKTHAKLIVHGYATY---------------PSL--VAALIST 86
V + + S S A T AKL + P+L V A +S
Sbjct: 72 VLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSA 131
Query: 87 YARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGG 146
+ Q H V MD F + + M+ G ARKVFD+M +DVVT + L+
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCA 191
Query: 147 YVKNVRFLDGLRLFRGMLSAEVE-----------------------------------PD 171
Y + + +R+ M S+ +E PD
Sbjct: 192 YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPD 251
Query: 172 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR--------- 222
T +SV+ L + +HG ++++ + + + +A++DMY K G
Sbjct: 252 QVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN 311
Query: 223 ----------------------IDVSKQVFDTVARD----HVSVWNAMINGLAVHGLALD 256
+D + ++F+ +V W ++I G A +G ++
Sbjct: 312 QFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIE 371
Query: 257 AIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGT-M 315
A+ +F M+V V P+ +T +L AC + + GR L+ H G+ +
Sbjct: 372 ALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNV--HVGSAL 429
Query: 316 VDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
+D+ + G + + + MP + ++V W +L++ +HGK
Sbjct: 430 IDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHGK 469
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/345 (39%), Positives = 199/345 (57%), Gaps = 11/345 (3%)
Query: 112 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 171
+I + + D AR VFD++ VV +N +I GY + R + L LFR M ++P+
Sbjct: 170 LINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPN 229
Query: 172 GFTFASVVTGCARLGALCNAKWVHGLMLE----KRVKLNYILSAALVDMYAKCGRIDVSK 227
T SV++ CA LG+L KW+H + K VK+N AL+DM+AKCG +D +
Sbjct: 230 EITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN----TALIDMFAKCGSLDDAV 285
Query: 228 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 287
+F+ + W+AMI A HG A ++ +F RM ENV PD ITF+G+L ACSH G
Sbjct: 286 SIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTG 345
Query: 288 LVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 347
V EGR++F+ M ++F I P ++HYG+MVDLL RAGNLE+A I +P+ P ++WR L
Sbjct: 346 RVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRIL 405
Query: 348 LSACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVR 404
L+AC H +LAE I L+ GD+V+LSN+Y K W + +R +MK
Sbjct: 406 LAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAV 465
Query: 405 KKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
K G S IE+ + +H+F + D + +HR L+ +++ K G
Sbjct: 466 KVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSG 510
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 124/235 (52%), Gaps = 4/235 (1%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
AR +F+ M D+V +N++ GY + L+ LF +L + PD +TF S++ CA
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 244
AL + +H L ++ + N + L++MY +C +D ++ VFD + V +NAM
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 245 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR-EHFNIMQNRF 303
I G A +A+++F M+ + + P+ IT + +L +C+ G ++ G+ H ++ F
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 304 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 358
++ ++D+ + G+L++A ++ + M + D W A++ A HGK E
Sbjct: 262 CKYVKVN--TALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAYANHGKAE 313
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 206/373 (55%), Gaps = 6/373 (1%)
Query: 63 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAG 120
+ H +++V G+ + L ++I YA+C Q A F V D +I K G
Sbjct: 200 QAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLG 259
Query: 121 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 180
+ + A K+F +MP ++ V+W LI GYV+ L LFR M++ V+P+ FTF+S +
Sbjct: 260 DMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLC 319
Query: 181 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 240
A + +L + K +HG M+ V+ N I+ ++L+DMY+K G ++ S++VF H V
Sbjct: 320 ASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCV 379
Query: 241 -WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIM 299
WN MI+ LA HGL A+ + M V P+ T V IL ACSH GLV EG F M
Sbjct: 380 FWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESM 439
Query: 300 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKEL 359
+ I P EHY ++DLLGRAG +E I+ MP EPD IW A+L CRIHG +EL
Sbjct: 440 TVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEEL 499
Query: 360 AEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGD 416
+ A + +L+ S ++LLS++Y W E++R +MK V K++ SWIE+
Sbjct: 500 GKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEK 559
Query: 417 SIHQFNAADQSHA 429
+ F +D SHA
Sbjct: 560 KVEAFTVSDGSHA 572
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 153/325 (47%), Gaps = 35/325 (10%)
Query: 65 HAKLIVHGYATYPSLVAA-LISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAGE 121
H L + G+ +L++ LI Y +C +P A VF + + + +S N ++ +K+G
Sbjct: 69 HRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGM 128
Query: 122 CDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTG 181
AR VFD MP RDVV+WNT++ GY ++ + L ++ + ++ + F+FA ++T
Sbjct: 129 LVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTA 188
Query: 182 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 241
C + L + HG +L N +LS +++D YAKCG+++ +K+ FD + + +W
Sbjct: 189 CVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIW 248
Query: 242 NAMINGLAV-------------------------------HGLALDAIAVFSRMEVENVL 270
+I+G A G A+ +F +M V
Sbjct: 249 TTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVK 308
Query: 271 PDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACN 330
P+ TF L A + + G+E M R ++P +++D+ ++G+LE +
Sbjct: 309 PEQFTFSSCLCASASIASLRHGKEIHGYMI-RTNVRPNAIVISSLIDMYSKSGSLEASER 367
Query: 331 MIKAMPVEPDVVIWRALLSACRIHG 355
+ + + D V W ++SA HG
Sbjct: 368 VFRICDDKHDCVFWNTMISALAQHG 392
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 90/220 (40%), Gaps = 36/220 (16%)
Query: 175 FASVVTGCARLGALCNAKWVHG-LMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV 233
AS++ C +L KW+H L + + N +LS L+ MY KCG+ + +VFD +
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 234 ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLP---------------------- 271
++ WN M++G G+ + A VF M +V+
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 272 ---------DSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGR 321
+ +F G+L AC + R+ H ++ FL L +++D +
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLS--CSIIDAYAK 226
Query: 322 AGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAE 361
G +E A M V+ D+ IW L+S G E AE
Sbjct: 227 CGQMESAKRCFDEMTVK-DIHIWTTLISGYAKLGDMEAAE 265
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 136/322 (42%), Positives = 194/322 (60%), Gaps = 6/322 (1%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM- 163
D + +I+ K G A+ +FD+MP RDVV +N+++ GYV+N ++ L +F M
Sbjct: 282 DVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDME 341
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
+ + PD T V+ A+LG L A +H ++EK+ L L AL+DMY+KCG I
Sbjct: 342 KESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSI 401
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
+ VF+ + + WNAMI GLA+HGL A + ++E ++ PD ITFVG+L AC
Sbjct: 402 QHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNAC 461
Query: 284 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 343
SH GLV EG F +M+ + I+P+L+HYG MVD+L R+G++E A N+I+ MPVEP+ VI
Sbjct: 462 SHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVI 521
Query: 344 WRALLSACRIHGKKELAEFAIANISRLESG----DFVLLSNMYCSLKNWHNAERVRNMMK 399
WR L+AC H + E E +A L++G +VLLSNMY S W + RVR MMK
Sbjct: 522 WRTFLTACSHHKEFETGEL-VAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMK 580
Query: 400 IGGVRKKRGKSWIELGDSIHQF 421
+ K G SWIEL +H+F
Sbjct: 581 ERKIEKIPGCSWIELDGRVHEF 602
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 145/300 (48%), Gaps = 43/300 (14%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D F +N +I +K G ++R++FD+MP RD V++N++I GYVK + LF ++
Sbjct: 155 DLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELF-DLM 213
Query: 165 SAEVEPDGFTFASVVTGCARLGALCN-AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
E++ + ++ S+++G A+ + A + M EK + I +++D Y K GRI
Sbjct: 214 PMEMK-NLISWNSMISGYAQTSDGVDIASKLFADMPEK----DLISWNSMIDGYVKHGRI 268
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLA----------------------------- 254
+ +K +FD + R V W MI+G A G
Sbjct: 269 EDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNK 328
Query: 255 --LDAIAVFSRMEVEN-VLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLE 310
++A+ +FS ME E+ +LPD T V +L A + G +++ + H I++ +F + +L
Sbjct: 329 YHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLG 388
Query: 311 HYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRL 370
++D+ + G+++ A + + + + W A++ IHG E A + I RL
Sbjct: 389 --VALIDMYSKCGSIQHAMLVFEGIE-NKSIDHWNAMIGGLAIHGLGESAFDMLLQIERL 445
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 128/304 (42%), Gaps = 47/304 (15%)
Query: 58 STTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLM 117
S + H +LI G +L ++ +A +P++A
Sbjct: 25 SDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLA--------------------- 63
Query: 118 KAGECDIARKVFDKM--------PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
D AR VF + V D WN +I + L L ML V
Sbjct: 64 -----DFARCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVS 118
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
D F+ + V+ C+RLG + +HG + + + + L L+ +Y KCG + +S+Q+
Sbjct: 119 VDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQM 178
Query: 230 FDTVA-RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 288
FD + RD VS +N+MI+G GL + A +F M +E + + I++ ++ +
Sbjct: 179 FDRMPKRDSVS-YNSMIDGYVKCGLIVSARELFDLMPME--MKNLISWNSMISGYA---- 231
Query: 289 VNEGREHFNIMQNRFLIQPQ--LEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 346
+ + +I F P+ L + +M+D + G +E+A + MP DVV W
Sbjct: 232 --QTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMP-RRDVVTWAT 288
Query: 347 LLSA 350
++
Sbjct: 289 MIDG 292
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 137/396 (34%), Positives = 215/396 (54%), Gaps = 33/396 (8%)
Query: 57 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESL 116
D HA ++ G P L+ +L + YA+C
Sbjct: 237 DLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC-------------------------- 270
Query: 117 MKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 176
G+ A+ +FDKM +++ WN +I GY KN + + +F M++ +V PD +
Sbjct: 271 ---GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 177 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 236
S ++ CA++G+L A+ ++ + + + +S+AL+DM+AKCG ++ ++ VFD
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 237 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 296
V VW+AMI G +HG A +AI+++ ME V P+ +TF+G+L AC+H G+V EG F
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 297 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
N M + I PQ +HY ++DLLGRAG+L++A +IK MPV+P V +W ALLSAC+ H
Sbjct: 448 NRMADH-KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRH 506
Query: 357 KELAEFA---IANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIE 413
EL E+A + +I +G +V LSN+Y + + W VR MK G+ K G SW+E
Sbjct: 507 VELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Query: 414 LGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
+ + F D+SH + I R +E + R K G
Sbjct: 567 VRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGG 602
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 141/271 (52%), Gaps = 7/271 (2%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPV--RDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
D F +N +I K AR VF+ +P+ R +V+W ++ Y +N ++ L +F
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ 212
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
M +V+PD SV+ L L + +H +++ +++ L +L MYAKCG+
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272
Query: 223 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
+ +K +FD + ++ +WNAMI+G A +G A +AI +F M ++V PD+I+ + A
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISA 332
Query: 283 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 342
C+ G + + R + + R + + ++D+ + G++E A ++ ++ DVV
Sbjct: 333 CAQVGSLEQARSMYEYV-GRSDYRDDVFISSALIDMFAKCGSVEGA-RLVFDRTLDRDVV 390
Query: 343 IWRALLSACRIHGKKELAEFAIANISRLESG 373
+W A++ +HG+ A AI+ +E G
Sbjct: 391 VWSAMIVGYGLHGR---AREAISLYRAMERG 418
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 164/347 (47%), Gaps = 8/347 (2%)
Query: 70 VHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVF 129
+H + Y SL+ + + A+ Q H V F +I + G+ AR+VF
Sbjct: 18 IHSDSFYASLIDS-ATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVF 76
Query: 130 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 189
D +P + WN +I GY +N F D L ++ M A V PD FTF ++ C+ L L
Sbjct: 77 DDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQ 136
Query: 190 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV--WNAMING 247
++VH + + + L+ +YAKC R+ ++ VF+ + ++ W A+++
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
Query: 248 LAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQ 306
A +G ++A+ +FS+M +V PD + V +L A + + +GR H ++++ I+
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256
Query: 307 PQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG-KKELAEFAIA 365
P L ++ + + G + A + M P++++W A++S +G +E +
Sbjct: 257 PDL--LISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMISGYAKNGYAREAIDMFHE 313
Query: 366 NISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWI 412
I++ D + +++ + + E+ R+M + G R +I
Sbjct: 314 MINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 198/333 (59%), Gaps = 3/333 (0%)
Query: 120 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVV 179
G +IA KVFD+MPVRD+V+WN +I + L +++ M + V D +T +++
Sbjct: 156 GSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALL 215
Query: 180 TGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS 239
+ CA + AL +H + + R + +S AL+DMYAKCG ++ + VF+ + + V
Sbjct: 216 SSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVL 275
Query: 240 VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIM 299
WN+MI G VHG ++AI+ F +M V P++ITF+G+L CSH GLV EG EHF IM
Sbjct: 276 TWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIM 335
Query: 300 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKEL 359
++F + P ++HYG MVDL GRAG LE + MI A D V+WR LL +C+IH EL
Sbjct: 336 SSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLEL 395
Query: 360 AEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGD 416
E A+ + +LE +GD+VL++++Y + + +R +++ ++ G SWIE+GD
Sbjct: 396 GEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGD 455
Query: 417 SIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
+H+F D+ H E I+ L +I RA G
Sbjct: 456 QVHKFVVDDKMHPESAVIYSELGEVINRAILAG 488
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 116/233 (49%), Gaps = 15/233 (6%)
Query: 129 FDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLF-RGMLSAEVEPDGFTFASVVTGCARLGA 187
FD P WN LI G+ + L+ + + R +LS+ PD FTF + C R+ +
Sbjct: 65 FDSDP--STSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKS 122
Query: 188 LCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNAMIN 246
+ +HG ++ + I++ +LV Y+ G ++++ +VFD + RD VS WN MI
Sbjct: 123 IPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVS-WNVMIC 181
Query: 247 GLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQ 306
+ GL A++++ RM E V DS T V +L +C+H +N G +M +R
Sbjct: 182 CFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMG-----VMLHRIACD 236
Query: 307 PQLEH----YGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
+ E ++D+ + G+LE A + M + DV+ W +++ +HG
Sbjct: 237 IRCESCVFVSNALIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMIIGYGVHG 288
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 107 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 166
F N +I+ K G + A VF+ M RDV+TWN++I GY + ++ + FR M+++
Sbjct: 244 FVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVAS 303
Query: 167 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKL--NYILSAALVDMYAKCGRID 224
V P+ TF ++ GC+ G L H ++ + L N +VD+Y + G+++
Sbjct: 304 GVRPNAITFLGLLLGCSHQG-LVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLE 362
Query: 225 VS-KQVFDTVARDHVSVWNAMINGLAVH-GLALDAIAVFSRMEVE 267
S + ++ + + +W ++ +H L L +A+ +++E
Sbjct: 363 NSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLE 407
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/413 (35%), Positives = 225/413 (54%), Gaps = 9/413 (2%)
Query: 34 RSSHSLTDHSVFHRVLQRSRASMDSTTAAK-THAKLIVHGYATYPSLVAALISTYARCHQ 92
R S L D F + +S AS+ S K H L G + ALI Y +
Sbjct: 101 RKSFELPDRFTFPFMF-KSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDD 159
Query: 93 PHIAHHVFSRVM--DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKN 150
AH VF + D S N ++ + G+ A+ +F M + +V+W +I GY
Sbjct: 160 LVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGI 219
Query: 151 VRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYI-L 209
+++ + FR M A +EPD + SV+ CA+LG+L KW+H L E+R L +
Sbjct: 220 GCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH-LYAERRGFLKQTGV 278
Query: 210 SAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENV 269
AL++MY+KCG I + Q+F + V W+ MI+G A HG A AI F+ M+ V
Sbjct: 279 CNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKV 338
Query: 270 LPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEAC 329
P+ ITF+G+L ACSH G+ EG +F++M+ + I+P++EHYG ++D+L RAG LE A
Sbjct: 339 KPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAV 398
Query: 330 NMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLK 386
+ K MP++PD IW +LLS+CR G ++A A+ ++ LE G++VLL+N+Y L
Sbjct: 399 EITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLG 458
Query: 387 NWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLE 439
W + R+R M++ ++K G S IE+ + + +F + D S I VL+
Sbjct: 459 KWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQ 511
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/380 (34%), Positives = 223/380 (58%), Gaps = 12/380 (3%)
Query: 77 PSLVA--ALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGECDIARKVFDKM 132
P+LVA A+I+ R + A +F +++ + S N+++ +KAGE + A+++F +M
Sbjct: 170 PNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEM 229
Query: 133 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 192
P RD V+W+T+I G N F + FR + A + P+ + V++ C++ G+ K
Sbjct: 230 PHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGK 289
Query: 193 WVHGLMLEKRVKLNYILSA--ALVDMYAKCGRIDVSKQVFDTVARDHVSV-WNAMINGLA 249
+HG + ++ ++I+S AL+DMY++CG + +++ VF+ + V W +MI GLA
Sbjct: 290 ILHGFV--EKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLA 347
Query: 250 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQL 309
+HG +A+ +F+ M V PD I+F+ +L ACSH GL+ EG ++F+ M+ + I+P++
Sbjct: 348 MHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEI 407
Query: 310 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISR 369
EHYG MVDL GR+G L++A + I MP+ P ++WR LL AC HG ELAE ++
Sbjct: 408 EHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNE 467
Query: 370 LE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQ 426
L+ SGD VLLSN Y + W + +R M + ++K S +E+G ++++F A ++
Sbjct: 468 LDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEK 527
Query: 427 SHAEMKAIHRVLEGLIQRAK 446
H L+ +I R K
Sbjct: 528 KKGIDIEAHEKLKEIILRLK 547
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 108/241 (44%), Gaps = 13/241 (5%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML-SAEVEPDGFTFASVVTGCA 183
AR++ P D +NTL+ GY ++ + + +F M+ V PD F+FA V+
Sbjct: 58 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVE 117
Query: 184 RLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNA 243
+L +H L+ ++ + + L+ MY CG ++ +++VFD + + ++ WNA
Sbjct: 118 NFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA 177
Query: 244 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 303
+I A +F +M V N ++ G +KA G + + F+ M +R
Sbjct: 178 VITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKA----GELESAKRIFSEMPHRD 233
Query: 304 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSACRIHGKKELA 360
+ + TM+ + G+ E+ + + + P+ V +LSAC G E
Sbjct: 234 DVS-----WSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG 288
Query: 361 E 361
+
Sbjct: 289 K 289
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/354 (37%), Positives = 206/354 (58%), Gaps = 13/354 (3%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
+D N++++ M++G D ARKVFD M R+VVTWN+LI K VR + LFR M
Sbjct: 269 VDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKM 328
Query: 164 LSAEVEPDGFTFASVVT---GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
+ E GF++A++ T C+R+ AL K +H +L+ + K + L +L+DMY KC
Sbjct: 329 ---QEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKC 385
Query: 221 GRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL 280
G ++ S++VFD + ++ WN M+N A++G + I +F M V PD ITFV +L
Sbjct: 386 GEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALL 445
Query: 281 KACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 340
CS GL G F M+ F + P LEHY +VD+LGRAG ++EA +I+ MP +P
Sbjct: 446 SGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPS 505
Query: 341 VVIWRALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNM 397
IW +LL++CR+HG + E A + LE G++V++SN+Y K W N +++R M
Sbjct: 506 ASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREM 565
Query: 398 MKIGGVRKKRGKSWIELGDSIHQFNAAD----QSHAEMKAIHRVLEGLIQRAKF 447
MK GV+K+ G SW+++ D I F A ++ E K + L+ I+++ +
Sbjct: 566 MKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGY 619
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 124/240 (51%), Gaps = 7/240 (2%)
Query: 123 DIARKVFDKMPVRDVVT---WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVV 179
D+ARK+FD + ++T W + GY +N D L ++ ML + +EP F+ + +
Sbjct: 184 DLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVAL 243
Query: 180 TGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS 239
C L L + +H +++++ K++ ++ L+ +Y + G D +++VFD ++ +V
Sbjct: 244 KACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVV 303
Query: 240 VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNI 298
WN++I+ L+ + +F +M+ E + T IL ACS + G+E H I
Sbjct: 304 TWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQI 363
Query: 299 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 358
++++ +P + +++D+ G+ G +E + + M + D+ W +L+ I+G E
Sbjct: 364 LKSKE--KPDVPLLNSLMDMYGKCGEVEYSRRVFDVM-LTKDLASWNIMLNCYAINGNIE 420
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/340 (36%), Positives = 193/340 (56%), Gaps = 3/340 (0%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N VI +K+ + A++ F+ + +++V++NT + G +N+ F +L + E+
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELG 471
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
FTFAS+++G A +G++ + +H +++ + N + AL+ MY+KCG ID + +V
Sbjct: 472 VSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRV 531
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 289
F+ + +V W +MI G A HG A+ + F++M E V P+ +T+V IL ACSH GLV
Sbjct: 532 FNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLV 591
Query: 290 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 349
+EG HFN M I+P++EHY MVDLL RAG L +A I MP + DV++WR L
Sbjct: 592 SEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLG 651
Query: 350 ACRIHGKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKK 406
ACR+H EL + A I L E ++ LSN+Y W + +R MK + K+
Sbjct: 652 ACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKE 711
Query: 407 RGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 446
G SWIE+GD IH+F D +H I+ L+ LI K
Sbjct: 712 GGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIK 751
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
A KVFDKM +VVTW +I ++ + +R F M+ + E D FT +SV + CA
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC---GRIDVSKQVFDTVARDHVSVW 241
L L K +H + R L + +LVDMYAKC G +D ++VFD + V W
Sbjct: 282 LENLSLGKQLHSWAI--RSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 242 NAMINGLAVH-GLALDAIAVFSRMEVE-NVLPDSITFVGILKACSH 285
A+I G + LA +AI +FS M + +V P+ TF KAC +
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 119/272 (43%), Gaps = 45/272 (16%)
Query: 120 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRF-LDGLRLFRGMLS-AEVEPDGFTFAS 177
G D RKVFD+M V++W LI GY+KN + + LF M++ VEP+ FTF+S
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 237
C L K V G ++ + N ++ +++ M+ K R++ +++ F++++ +
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN 438
Query: 238 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK---------------- 281
+ +N ++G + A + S + + + TF +L
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHS 498
Query: 282 -------AC------------SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRA 322
+C S CG ++ FN M+NR +I + +M+ +
Sbjct: 499 QVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVIS-----WTSMITGFAKH 553
Query: 323 G---NLEEACNMIKAMPVEPDVVIWRALLSAC 351
G + E N + V+P+ V + A+LSAC
Sbjct: 554 GFAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 9/216 (4%)
Query: 171 DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF 230
D TF+S++ C R K VH ++E ++ + +L +L+ +Y+K G ++ VF
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 231 DTV----ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 286
+T+ RD VS W+AM+ +G LDAI VF ++P+ + +++ACS+
Sbjct: 121 ETMRRFGKRDVVS-WSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179
Query: 287 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGN-LEEACNMIKAMPVEPDVVIWR 345
V GR + + + +++D+ + N E A + M E +VV W
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS-ELNVVTWT 238
Query: 346 ALLSACRIHG--KKELAEFAIANISRLESGDFVLLS 379
+++ C G ++ + F +S ES F L S
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 90/195 (46%), Gaps = 5/195 (2%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKM---PVRDVVTWNTLIGGYVKNVRFLDGLRLFR 161
D+ N +I K+G+ A VF+ M RDVV+W+ ++ Y N R LD +++F
Sbjct: 96 DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155
Query: 162 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEK-RVKLNYILSAALVDMYAKC 220
L + P+ + + +V+ C+ + + G +++ + + + +L+DM+ K
Sbjct: 156 EFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKG 215
Query: 221 -GRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGI 279
+ + +VFD ++ +V W MI G +AI F M + D T +
Sbjct: 216 ENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV 275
Query: 280 LKACSHCGLVNEGRE 294
AC+ ++ G++
Sbjct: 276 FSACAELENLSLGKQ 290
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 205/359 (57%), Gaps = 16/359 (4%)
Query: 107 FSKNLVIESLMKAGECDI---------ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGL 157
FS + +SL+ D+ A KVFD++P RD V+WN L Y++N R D L
Sbjct: 140 FSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVL 199
Query: 158 RLFRGM---LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALV 214
LF M + V+PDG T + CA LGAL K VH + E + LS LV
Sbjct: 200 VLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLV 259
Query: 215 DMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSI 274
MY++CG +D + QVF + +V W A+I+GLA++G +AI F+ M + P+
Sbjct: 260 SMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQ 319
Query: 275 TFVGILKACSHCGLVNEGREHFNIMQN-RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIK 333
T G+L ACSH GLV EG F+ M++ F I+P L HYG +VDLLGRA L++A ++IK
Sbjct: 320 TLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIK 379
Query: 334 AMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHN 390
+M ++PD IWR LL ACR+HG EL E I+++ L E+GD+VLL N Y ++ W
Sbjct: 380 SMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEK 439
Query: 391 AERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
+R++MK + K G S IEL ++H+F D SH + I+++L + Q+ K G
Sbjct: 440 VTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAG 498
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 10/221 (4%)
Query: 141 NTLIGGYVKNVRFLDGLRLFRGML---SAEVEPDGFTFASVVTGCARLGALCNAKWVHGL 197
NT+I + + +G RLFR + S P +FA + C + G L +HG
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFA--LKCCIKSGDLLGGLQIHGK 138
Query: 198 MLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDA 257
+ + +L L+D+Y+ C + +VFD + + WN + + + D
Sbjct: 139 IFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDV 198
Query: 258 IAVFSRMEVE---NVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGT 314
+ +F +M+ + V PD +T + L+AC++ G ++ G++ + + L L T
Sbjct: 199 LVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGL-SGALNLSNT 257
Query: 315 MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
+V + R G++++A + M E +VV W AL+S ++G
Sbjct: 258 LVSMYSRCGSMDKAYQVFYGMR-ERNVVSWTALISGLAMNG 297
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 155/464 (33%), Positives = 240/464 (51%), Gaps = 42/464 (9%)
Query: 3 NETRTMLIKLQRLIHGAIKFGSLSESWSITQRSSHSLTDHSVFHRVLQRSRASMDSTTAA 62
N R M+ + LI+ +KF L+++ H +F ++ QR+ S TT
Sbjct: 90 NGHRPMMFLVNVLINMYVKFNLLNDA-------------HQLFDQMPQRNVISW--TTMI 134
Query: 63 KTHAKLIVHGYA-----------------TYPSLVAAL--ISTYARCHQPHIAHHVFSRV 103
++K +H A TY S++ + +S H I + S
Sbjct: 135 SAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLES-- 192
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
D F ++ +I+ K GE + A VFD+M D + WN++IGG+ +N R L LF+ M
Sbjct: 193 -DVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRM 251
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
A + T SV+ C L L H ++ + + IL+ ALVDMY KCG +
Sbjct: 252 KRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV--KYDQDLILNNALVDMYCKCGSL 309
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
+ + +VF+ + V W+ MI+GLA +G + +A+ +F RM+ P+ IT VG+L AC
Sbjct: 310 EDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFAC 369
Query: 284 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 343
SH GL+ +G +F M+ + I P EHYG M+DLLG+AG L++A ++ M EPD V
Sbjct: 370 SHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVT 429
Query: 344 WRALLSACRIHGKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMKI 400
WR LL ACR+ LAE+A + L ++G + LLSN+Y + + W + E +R M+
Sbjct: 430 WRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRD 489
Query: 401 GGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQR 444
G++K+ G SWIE+ IH F D SH ++ + + L LI R
Sbjct: 490 RGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHR 533
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 163/338 (48%), Gaps = 17/338 (5%)
Query: 31 ITQRSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGY----ATYPSLVAALIST 86
+T R S+S TD ++ R D A K L HG ATY L+ IS
Sbjct: 15 VTLRCSYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISN 74
Query: 87 YARCHQPHIAHHVF---SRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTL 143
A I H++ R M F N++I +K + A ++FD+MP R+V++W T+
Sbjct: 75 RAVHEGNLICRHLYFNGHRPM-MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTM 133
Query: 144 IGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRV 203
I Y K L L ML V P+ +T++SV+ C + + + +H ++++ +
Sbjct: 134 ISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGL 190
Query: 204 KLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSR 263
+ + + +AL+D++AK G + + VFD + VWN++I G A + + A+ +F R
Sbjct: 191 ESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKR 250
Query: 264 MEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRA 322
M+ + + T +L+AC+ L+ G + H +I++ L +VD+ +
Sbjct: 251 MKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK----YDQDLILNNALVDMYCKC 306
Query: 323 GNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
G+LE+A + M E DV+ W ++S +G + A
Sbjct: 307 GSLEDALRVFNQMK-ERDVITWSTMISGLAQNGYSQEA 343
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 200/346 (57%), Gaps = 4/346 (1%)
Query: 108 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 167
+ N +I M G + A +F++MPV+D+++W T+I GY +N R+ + + +F M+
Sbjct: 968 TSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 1027
Query: 168 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 227
+ PD T ++V++ CA LG L K VH L+ L+ + +ALVDMY+KCG ++ +
Sbjct: 1028 IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERAL 1087
Query: 228 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 287
VF + + ++ WN++I GLA HG A +A+ +F++ME+E+V P+++TFV + AC+H G
Sbjct: 1088 LVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAG 1147
Query: 288 LVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 347
LV+EGR + M + + I +EHYG MV L +AG + EA +I M EP+ VIW AL
Sbjct: 1148 LVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGAL 1207
Query: 348 LSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVR 404
L CRIH +AE A + LE SG + LL +MY W + +R M+ G+
Sbjct: 1208 LDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIE 1267
Query: 405 KK-RGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
K G S I + H F AAD+SH+ + +L+ + + G
Sbjct: 1268 KICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAG 1313
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 124/316 (39%), Gaps = 79/316 (25%)
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTG- 181
D+A +M +V +N L G+V + L L+ ML V P +T++S+V
Sbjct: 822 DLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKAS 881
Query: 182 --CARLGALCNAK-WVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 238
+R G A W G +++ L+D Y+ GRI +++VFD +
Sbjct: 882 SFASRFGESLQAHIWKFGFGFHVKIQ------TTLIDFYSATGRIREARKVFDEMPERDD 935
Query: 239 SVW-------------------------------NAMINGLAVHGLALDAIAVFSRMEV- 266
W N +ING G A ++F++M V
Sbjct: 936 IAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVK 995
Query: 267 ------------------------------ENVLPDSITFVGILKACSHCGLVNEGRE-H 295
E ++PD +T ++ AC+H G++ G+E H
Sbjct: 996 DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVH 1055
Query: 296 FNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
+QN F++ + +VD+ + G+LE A + +P + ++ W +++ HG
Sbjct: 1056 MYTLQNGFVLDVYIG--SALVDMYSKCGSLERALLVFFNLP-KKNLFCWNSIIEGLAAHG 1112
Query: 356 KKELAEFAIANISRLE 371
A+ A+ +++E
Sbjct: 1113 ---FAQEALKMFAKME 1125
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 6/183 (3%)
Query: 222 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
R+D++ + +V V+NA+ G + ++ ++ RM ++V P S T+ ++K
Sbjct: 820 RLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVK 879
Query: 282 ACSHCGLVNEG-REHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 340
A S E + H F ++ Q T++D G + EA + MP E D
Sbjct: 880 ASSFASRFGESLQAHIWKFGFGFHVKIQT----TLIDFYSATGRIREARKVFDEMP-ERD 934
Query: 341 VVIWRALLSACRIHGKKELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKI 400
+ W ++SA R + A +S L N Y L N AE + N M +
Sbjct: 935 DIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPV 994
Query: 401 GGV 403
+
Sbjct: 995 KDI 997
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 132/350 (37%), Positives = 197/350 (56%), Gaps = 4/350 (1%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
D F N +++ K G A VF +M V+D+++WNT+IGGY KN + L LF +
Sbjct: 430 FDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLL 489
Query: 164 LSAE-VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
L + PD T A V+ CA L A + +HG ++ + ++ +LVDMYAKCG
Sbjct: 490 LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGA 549
Query: 223 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
+ ++ +FD +A + W MI G +HG +AIA+F++M + D I+FV +L A
Sbjct: 550 LLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYA 609
Query: 283 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 342
CSH GLV+EG FNIM++ I+P +EHY +VD+L R G+L +A I+ MP+ PD
Sbjct: 610 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDAT 669
Query: 343 IWRALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMK 399
IW ALL CRIH +LAE + LE +G +VL++N+Y + W +R+R +
Sbjct: 670 IWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIG 729
Query: 400 IGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
G+RK G SWIE+ ++ F A D S+ E + I L + R +G
Sbjct: 730 QRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEG 779
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 127/242 (52%), Gaps = 4/242 (1%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N ++ +K D ARKVFD+M RDV++WN++I GYV N GL +F ML + +E
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
D T SV GCA + + VH + ++ L+DMY+KCG +D +K V
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 289
F ++ V + +MI G A GLA +A+ +F ME E + PD T +L C+ L+
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 413
Query: 290 NEG-REHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 348
+EG R H I +N + + ++D+ + G+++EA + M V+ D++ W ++
Sbjct: 414 DEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTII 470
Query: 349 SA 350
Sbjct: 471 GG 472
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 175/365 (47%), Gaps = 29/365 (7%)
Query: 44 VFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLV--------AALISTYARCHQPHI 95
VF + +R S +S L G + + ++ A ++S +A C +
Sbjct: 252 VFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRL 311
Query: 96 ------AHHV-----FSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLI 144
H + FSR D F N +++ K G+ D A+ VF +M R VV++ ++I
Sbjct: 312 ISLGRAVHSIGVKACFSR-EDRFC-NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMI 369
Query: 145 GGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVK 204
GY + + ++LF M + PD +T +V+ CAR L K VH + E +
Sbjct: 370 AGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLG 429
Query: 205 LNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFS-R 263
+ +S AL+DMYAKCG + ++ VF + + WN +I G + + A +A+++F+
Sbjct: 430 FDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLL 489
Query: 264 MEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRA 322
+E + PD T +L AC+ ++GRE H IM+N + + + ++VD+ +
Sbjct: 490 LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYAKC 547
Query: 323 GNLEEACNMIKAMPVEPDVVIWRALLSACRIH--GKKELAEFAIANISRLESGDFVLLSN 380
G L A +M+ D+V W +++ +H GK+ +A F + +E+ + +S
Sbjct: 548 GALLLA-HMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 606
Query: 381 MY-CS 384
+Y CS
Sbjct: 607 LYACS 611
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 132/266 (49%), Gaps = 21/266 (7%)
Query: 115 SLM--KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDG 172
SLM G+ A +VFD++ + + WN L+ K+ F + LF+ M+S+ VE D
Sbjct: 136 SLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDS 195
Query: 173 FTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDT 232
+TF+ V + L ++ + +HG +L+ + +LV Y K R+D +++VFD
Sbjct: 196 YTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDE 255
Query: 233 VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEG 292
+ V WN++ING +GLA ++VF +M V + D T V + C+ L++ G
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 293 REHFNI-------MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
R +I ++RF T++D+ + G+L+ A + + M + VV +
Sbjct: 316 RAVHSIGVKACFSREDRFC--------NTLLDMYSKCGDLDSAKAVFREMS-DRSVVSYT 366
Query: 346 ALLSACRIHGKKELAEFAIANISRLE 371
++++ + ++ LA A+ +E
Sbjct: 367 SMIAG---YAREGLAGEAVKLFEEME 389
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 12/260 (4%)
Query: 115 SLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFT 174
SL +C + FD R V NT + + ++ + ++L +S + + D T
Sbjct: 43 SLRTVSDCVDSITTFD----RSVTDANTQLRRFCESGNLENAVKLL--CVSGKWDIDPRT 96
Query: 175 FASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA 234
SV+ CA +L + K V + ++ L + L MY CG + + +VFD V
Sbjct: 97 LCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVK 156
Query: 235 RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE 294
+ WN ++N LA G +I +F +M V DS TF + K+ S V+ G +
Sbjct: 157 IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQ 216
Query: 295 -HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRI 353
H I+++ F + + + ++V + ++ A + M E DV+ W ++++
Sbjct: 217 LHGFILKSGFGERNSVGN--SLVAFYLKNQRVDSARKVFDEM-TERDVISWNSIINGYVS 273
Query: 354 HG--KKELAEFAIANISRLE 371
+G +K L+ F +S +E
Sbjct: 274 NGLAEKGLSVFVQMLVSGIE 293
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 248 bits (633), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 193/345 (55%), Gaps = 8/345 (2%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPV--RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 167
N +I+ K + D AR +FD + RDVVTW +IGGY ++ L L M +
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Query: 168 VE--PDGFTFASVVTGCARLGALCNAKWVHGLML-EKRVKLNYILSAALVDMYAKCGRID 224
+ P+ FT + + CA L AL K +H L ++ + +S L+DMYAKCG I
Sbjct: 471 CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSIS 530
Query: 225 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
++ VFD + + W +++ G +HG +A+ +F M D +T + +L ACS
Sbjct: 531 DARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACS 590
Query: 285 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 344
H G++++G E+FN M+ F + P EHY +VDLLGRAG L A +I+ MP+EP V+W
Sbjct: 591 HSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVW 650
Query: 345 RALLSACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIG 401
A LS CRIHGK EL E+A I+ L S G + LLSN+Y + W + R+R++M+
Sbjct: 651 VAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHK 710
Query: 402 GVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 446
GV+K+ G SW+E F D++H K I++VL +QR K
Sbjct: 711 GVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIK 755
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 154/298 (51%), Gaps = 24/298 (8%)
Query: 83 LISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAGECDIARKVFDKMPVR----D 136
L+ YA+C A+ VFS V D S N ++ + G + A ++F+KM D
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Query: 137 VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHG 196
VVTW+ I GY + + L + R MLS+ ++P+ T SV++GCA +GAL + K +H
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 197 LMLEKRVKL--------NYILSAALVDMYAKCGRIDVSKQVFDTVA---RDHVSVWNAMI 245
++ + L N +++ L+DMYAKC ++D ++ +FD+++ RD V W MI
Sbjct: 390 YAIKYPIDLRKNGHGDENMVIN-QLIDMYAKCKKVDTARAMFDSLSPKERD-VVTWTVMI 447
Query: 246 NGLAVHGLALDAIAVFSRMEVEN--VLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNR 302
G + HG A A+ + S M E+ P++ T L AC+ + G++ H ++N+
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ 507
Query: 303 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
P L ++D+ + G++ +A + M + +V W +L++ +HG E A
Sbjct: 508 QNAVP-LFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVT-WTSLMTGYGMHGYGEEA 563
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 165/396 (41%), Gaps = 61/396 (15%)
Query: 15 LIHGAIKFGSLSESWSITQRSSHSLTDHSVFH-RVLQRSRASMDSTTAAKT-------HA 66
LI I G LS + S+ +R S D V+H L RS D+ A K H+
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPS--DAGVYHWNSLIRSYG--DNGCANKCLYLFGLMHS 120
Query: 67 KLIVHGYATYPSLVAAL--ISTYARCHQP-HIAHHVFSRVMDTFSKNLVIESLMKAGECD 123
T+P + A IS+ RC + H V + + F N ++ +
Sbjct: 121 LSWTPDNYTFPFVFKACGEISS-VRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLS 179
Query: 124 IARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA-EVEPDGFTFASVVTGC 182
ARKVFD+M V DVV+WN++I Y K + L +F M + PD T +V+ C
Sbjct: 180 DARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPC 239
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 242
A LG K +H + + N + LVDMYAKCG +D + VF ++ V WN
Sbjct: 240 ASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWN 299
Query: 243 AMINGLAVHGLALDAIAVFSRMEVE----------------------------------- 267
AM+ G + G DA+ +F +M+ E
Sbjct: 300 AMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS 359
Query: 268 NVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG-------TMVDLLG 320
+ P+ +T + +L C+ G + G+E + ++ I + +G ++D+
Sbjct: 360 GIKPNEVTLISVLSGCASVGALMHGKE-IHCYAIKYPIDLRKNGHGDENMVINQLIDMYA 418
Query: 321 RAGNLEEACNMIKAM-PVEPDVVIWRALLSACRIHG 355
+ ++ A M ++ P E DVV W ++ HG
Sbjct: 419 KCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 136/307 (44%), Gaps = 10/307 (3%)
Query: 61 AAKTHAKLIVHGYATY-PSLVAALISTYARCHQPHIAHH---VFSRVMDTFSKNLVIESL 116
AAK+H + V ++T P + I Q + H F + + +L I +
Sbjct: 11 AAKSHQYIKVSLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFGILTLNLTSHL-ISTY 69
Query: 117 MKAGECDIARKVFDKMPVRD--VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFT 174
+ G A + + P D V WN+LI Y N L LF M S PD +T
Sbjct: 70 ISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYT 129
Query: 175 FASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA 234
F V C + ++ + H L L N + ALV MY++C + +++VFD ++
Sbjct: 130 FPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMS 189
Query: 235 RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKACSHCGLVNEGR 293
V WN++I A G A+ +FSRM E PD+IT V +L C+ G + G+
Sbjct: 190 VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGK 249
Query: 294 EHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRI 353
+ +IQ +VD+ + G ++EA + M V+ DVV W A+++
Sbjct: 250 QLHCFAVTSEMIQNMFVG-NCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAMVAGYSQ 307
Query: 354 HGKKELA 360
G+ E A
Sbjct: 308 IGRFEDA 314
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 107 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 166
F N +I+ K G AR VFD M ++ VTW +L+ GY + + L +F M
Sbjct: 514 FVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRI 573
Query: 167 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS------AALVDMYAKC 220
+ DG T V+ C+ G + G+ R+K + +S A LVD+ +
Sbjct: 574 GFKLDGVTLLVVLYACSHSGMI-----DQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRA 628
Query: 221 GRIDVSKQVFDTVARDHVS-VWNAMINGLAVHG 252
GR++ + ++ + + + VW A ++ +HG
Sbjct: 629 GRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 248 bits (633), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 149/420 (35%), Positives = 225/420 (53%), Gaps = 25/420 (5%)
Query: 44 VFHRVLQRSRASMDSTTAAKTHA---------------KLIVHGYATYPSLVAALISTYA 88
VF R+ Q S D T T + + +V + + AL+ +
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFC 193
Query: 89 RCHQPHIAHHVFSRVMDTFSK--NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGG 146
+C A VF + D K ++ + G D AR +F++ PV+DVV W ++ G
Sbjct: 194 KCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNG 253
Query: 147 YVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLN 206
YV+ RF + L LFR M +A + PD F S++TGCA+ GAL KW+HG + E RV ++
Sbjct: 254 YVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVD 313
Query: 207 YILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEV 266
++ ALVDMYAKCG I+ + +VF + + W ++I GLA++G++ A+ ++ ME
Sbjct: 314 KVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMEN 373
Query: 267 ENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLE 326
V D+ITFV +L AC+H G V EGR+ F+ M R +QP+ EH ++DLL RAG L+
Sbjct: 374 VGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLD 433
Query: 327 EACNMIKAMPVEPD---VVIWRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSN 380
EA +I M E D V ++ +LLSA R +G ++AE + ++E D LL++
Sbjct: 434 EAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLAS 493
Query: 381 MYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQ--SHAEMKAIHRVL 438
+Y S W + VR MK G+RK G S IE+ H+F D SH +M I+ +L
Sbjct: 494 VYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSML 553
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 137/285 (48%), Gaps = 39/285 (13%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM- 163
D++ N ++ G+ +I KVFD+MP RDVV+WN LI YV N RF D + +F+ M
Sbjct: 80 DSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMS 139
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
+ ++ D T S ++ C+ L L + ++ ++ + +++ + ALVDM+ KCG +
Sbjct: 140 QESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCL 198
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL------------- 270
D ++ VFD++ +V W +M+ G G +A +F R V++V+
Sbjct: 199 DKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFN 258
Query: 271 ------------------PDSITFVGILKACSHCGLVNEGR-EHFNIMQNRFLIQPQLEH 311
PD+ V +L C+ G + +G+ H I +NR + +
Sbjct: 259 RFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVV-- 316
Query: 312 YGT-MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
GT +VD+ + G +E A + + E D W +L+ ++G
Sbjct: 317 -GTALVDMYAKCGCIETALEVFYEIK-ERDTASWTSLIYGLAMNG 359
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 18/276 (6%)
Query: 137 VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHG 196
++ +N ++ F L LF + + PD FT V+ RL + + VHG
Sbjct: 11 LLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHG 70
Query: 197 LMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALD 256
++ ++ + +S +L+ MYA G+I+++ +VFD + + V WN +I+ +G D
Sbjct: 71 YAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFED 130
Query: 257 AIAVFSRMEVE-NVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTM 315
AI VF RM E N+ D T V L ACS + G + + F + ++ + +
Sbjct: 131 AIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--AL 188
Query: 316 VDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL----LSACRIHGKKELAEFAIANISRLE 371
VD+ + G L++A + +M + +V W ++ +S RI + L E R
Sbjct: 189 VDMFCKCGCLDKARAVFDSMR-DKNVKCWTSMVFGYVSTGRIDEARVLFE-------RSP 240
Query: 372 SGDFVL---LSNMYCSLKNWHNAERVRNMMKIGGVR 404
D VL + N Y + A + M+ G+R
Sbjct: 241 VKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 218/409 (53%), Gaps = 49/409 (11%)
Query: 75 TYPSLV-----AALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVF 129
TYPS++ A L+ + H + FS D N ++ K G+ D AR +F
Sbjct: 288 TYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD----NSLVSLYYKCGKFDEARAIF 343
Query: 130 DKMPVRDVVTWNTLIGGYV-----------------KNVRFL--------------DGLR 158
+KMP +D+V+WN L+ GYV KN+ +GL+
Sbjct: 344 EKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLK 403
Query: 159 LFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSA--ALVDM 216
LF M EP + F+ + CA LGA CN + H +L ++ + LSA AL+ M
Sbjct: 404 LFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL--KIGFDSSLSAGNALITM 461
Query: 217 YAKCGRIDVSKQVFDTVA-RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSIT 275
YAKCG ++ ++QVF T+ D VS WNA+I L HG +A+ V+ M + + PD IT
Sbjct: 462 YAKCGVVEEARQVFRTMPCLDSVS-WNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRIT 520
Query: 276 FVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 335
+ +L ACSH GLV++GR++F+ M+ + I P +HY ++DLL R+G +A ++I+++
Sbjct: 521 LLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESL 580
Query: 336 PVEPDVVIWRALLSACRIHGKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAE 392
P +P IW ALLS CR+HG EL A + L G ++LLSNM+ + W
Sbjct: 581 PFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVA 640
Query: 393 RVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGL 441
RVR +M+ GV+K+ SWIE+ +H F D SH E +A++ L+ L
Sbjct: 641 RVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDL 689
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 149/364 (40%), Gaps = 95/364 (26%)
Query: 57 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARC-HQPHIAHHVFSRVMDTFSKNLVIES 115
D + HA + G S+ AL+S Y++C P + H
Sbjct: 164 DEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHS----------------- 206
Query: 116 LMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRF------LDG------------- 156
ARKVFD++ +D +W T++ GYVKN F L+G
Sbjct: 207 ---------ARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAM 257
Query: 157 -------------LRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRV 203
L + R M+S+ +E D FT+ SV+ CA G L K VH +L +R
Sbjct: 258 ISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL-RRE 316
Query: 204 KLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNA-------------------- 243
++ +LV +Y KCG+ D ++ +F+ + + WNA
Sbjct: 317 DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 244 -----------MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEG 292
MI+GLA +G + + +FS M+ E P F G +K+C+ G G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 293 RE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 351
++ H +++ F L ++ + + G +EEA + + MP D V W AL++A
Sbjct: 437 QQYHAQLLKIGF--DSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAAL 493
Query: 352 RIHG 355
HG
Sbjct: 494 GQHG 497
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 142/332 (42%), Gaps = 46/332 (13%)
Query: 61 AAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMK 118
A H +I G+ ++ LI Y + + + A +F + D ++ ++
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 119 AGECDIARKVFDKMPV--RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 176
+G+ +AR VF+K PV RD V +N +I G+ N + LF M +PD FTFA
Sbjct: 93 SGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFA 152
Query: 177 SVVTGCARLGALCNAKWV--HGLMLEKRVKLNYILSAALVDMYAKCGR----IDVSKQVF 230
SV+ G A L A + V H L+ +S ALV +Y+KC + +++VF
Sbjct: 153 SVLAGLA-LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVF 211
Query: 231 DTVARDHVSVW--------------------------------NAMINGLAVHGLALDAI 258
D + W NAMI+G G +A+
Sbjct: 212 DEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEAL 271
Query: 259 AVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDL 318
+ RM + D T+ +++AC+ GL+ G++ + R ++ ++V L
Sbjct: 272 EMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN--SLVSL 329
Query: 319 LGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
+ G +EA + + MP + D+V W ALLS
Sbjct: 330 YYKCGKFDEARAIFEKMPAK-DLVSWNALLSG 360
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 117/328 (35%), Positives = 192/328 (58%), Gaps = 3/328 (0%)
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
K G A +VF+ M + VTW++++ GYV+N + + L L+R +E + FT +S
Sbjct: 209 KCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSS 268
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 237
V+ C+ L AL K +H ++ + N ++++ VDMYAKCG + S +F V +
Sbjct: 269 VICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKN 328
Query: 238 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 297
+ +WN +I+G A H + + +F +M+ + + P+ +TF +L C H GLV EGR F
Sbjct: 329 LELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK 388
Query: 298 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 357
+M+ + + P + HY MVD+LGRAG L EA +IK++P +P IW +LL++CR++
Sbjct: 389 LMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNL 448
Query: 358 ELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIEL 414
ELAE A + LE +G+ VLLSN+Y + K W + R +++ V+K RGKSWI++
Sbjct: 449 ELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDI 508
Query: 415 GDSIHQFNAADQSHAEMKAIHRVLEGLI 442
D +H F+ + H ++ I L+ L+
Sbjct: 509 KDKVHTFSVGESGHPRIREICSTLDNLV 536
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 156/329 (47%), Gaps = 39/329 (11%)
Query: 34 RSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQP 93
R S+ ++ ++ H +LQ + A H K+I +L+ LI+ Y++C
Sbjct: 53 RYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKC--- 109
Query: 94 HIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRF 153
G ++AR+VFD M R +V+WNT+IG Y +N
Sbjct: 110 --------------------------GFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143
Query: 154 LDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA---KWVHGLMLEKRVKLNYILS 210
+ L +F M + + FT +SV++ C G C+A K +H L ++ + LN +
Sbjct: 144 SEALDIFLEMRNEGFKFSEFTISSVLSAC---GVNCDALECKKLHCLSVKTCIDLNLYVG 200
Query: 211 AALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL 270
AL+D+YAKCG I + QVF+++ W++M+ G + +A+ ++ R + ++
Sbjct: 201 TALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 260
Query: 271 PDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEAC 329
+ T ++ ACS+ + EG++ H I ++ F + + VD+ + G+L E+
Sbjct: 261 QNQFTLSSVICACSNLAALIEGKQMHAVICKSGF--GSNVFVASSAVDMYAKCGSLRES- 317
Query: 330 NMIKAMPVEPDVVIWRALLSACRIHGKKE 358
+I + E ++ +W ++S H + +
Sbjct: 318 YIIFSEVQEKNLELWNTIISGFAKHARPK 346
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 7/209 (3%)
Query: 182 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 241
CAR GA+ AK HG ++ ++ + L L++ Y+KCG +++++QVFD + + W
Sbjct: 71 CARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSW 130
Query: 242 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS-HCGLVNEGREHFNIMQ 300
N MI + + +A+ +F M E T +L AC +C + + H +
Sbjct: 131 NTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLH--CLS 188
Query: 301 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
+ I L ++DL + G +++A + ++M + V W ++++ + E A
Sbjct: 189 VKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAGYVQNKNYEEA 247
Query: 361 EFAIANISR--LESGDFVLLSNMYCSLKN 387
R LE F LS++ C+ N
Sbjct: 248 LLLYRRAQRMSLEQNQFT-LSSVICACSN 275
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 78/166 (46%), Gaps = 3/166 (1%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
+ F + ++ K G + +F ++ +++ WNT+I G+ K+ R + + LF M
Sbjct: 297 NVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQ 356
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKR-VKLNYILSAALVDMYAKCGRI 223
+ P+ TF+S+++ C G + + LM + N + + +VD+ + G +
Sbjct: 357 QDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLL 416
Query: 224 DVSKQVFDTVARDHV-SVWNAMINGLAVH-GLALDAIAVFSRMEVE 267
+ ++ ++ D S+W +++ V+ L L +A E+E
Sbjct: 417 SEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELE 462
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/381 (35%), Positives = 213/381 (55%), Gaps = 6/381 (1%)
Query: 75 TYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGECDIARKVFDKM 132
TYP L+ A + I VF + D F +N +I + GE +++ VF+K+
Sbjct: 134 TYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKL 193
Query: 133 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS-AEVEPDGFTFASVVTGCARLGALCNA 191
+ +W++++ + + L LFRGM S ++ + S + CA GAL
Sbjct: 194 ESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLG 253
Query: 192 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 251
+HG +L +LN I+ +LVDMY KCG +D + +F + + + ++AMI+GLA+H
Sbjct: 254 MSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALH 313
Query: 252 GLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEH 311
G A+ +FS+M E + PD + +V +L ACSH GLV EGR F M ++P EH
Sbjct: 314 GEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEH 373
Query: 312 YGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE 371
YG +VDLLGRAG LEEA I+++P+E + VIWR LS CR+ EL + A + +L
Sbjct: 374 YGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLS 433
Query: 372 S---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSH 428
S GD++L+SN+Y + W + R R + I G+++ G S +EL H+F + D+SH
Sbjct: 434 SHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSH 493
Query: 429 AEMKAIHRVLEGLIQRAKFDG 449
+ K I+++L + + KF+G
Sbjct: 494 PKCKEIYKMLHQMEWQLKFEG 514
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 122/244 (50%), Gaps = 13/244 (5%)
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
+ A +F + +NT+I GYV + F + L + M+ EPD FT+ ++ C
Sbjct: 83 NYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKAC 142
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 242
RL ++ K +HG + + ++ + + +L++MY +CG +++S VF+ + + W+
Sbjct: 143 TRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWS 202
Query: 243 AMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKACSHCGLVNEGREHF----- 296
+M++ A G+ + + +F M E N+ + V L AC++ G +N G
Sbjct: 203 SMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLR 262
Query: 297 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
NI + ++Q L VD+ + G L++A ++ + M ++ + A++S +HG+
Sbjct: 263 NISELNIIVQTSL------VDMYVKCGCLDKALHIFQKMEKRNNLT-YSAMISGLALHGE 315
Query: 357 KELA 360
E A
Sbjct: 316 GESA 319
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/348 (37%), Positives = 196/348 (56%), Gaps = 3/348 (0%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
++F + ++ K G+ + AR VFD M +D+VTW+T+I GY N +G+ LF ML
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQML 305
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
++PD F+ ++ CA LGAL +W L+ N ++ AL+DMYAKCG +
Sbjct: 306 QENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMA 365
Query: 225 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
+VF + + + NA I+GLA +G + AVF + E + PD TF+G+L C
Sbjct: 366 RGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCV 425
Query: 285 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 344
H GL+ +G FN + + ++ +EHYG MVDL GRAG L++A +I MP+ P+ ++W
Sbjct: 426 HAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVW 485
Query: 345 RALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIG 401
ALLS CR+ +LAE + + LE +G++V LSN+Y W A VR+MM
Sbjct: 486 GALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKK 545
Query: 402 GVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
G++K G SWIEL +H+F A D+SH I+ LE L + G
Sbjct: 546 GMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMG 593
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 131/246 (53%), Gaps = 3/246 (1%)
Query: 119 AGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 178
+G + A K+FD++P R VVTW L GY + R + + LF+ M+ V+PD + V
Sbjct: 159 SGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQV 218
Query: 179 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 238
++ C +G L + +W+ M E ++ N + LV++YAKCG+++ ++ VFD++ +
Sbjct: 219 LSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDI 278
Query: 239 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 298
W+ MI G A + + I +F +M EN+ PD + VG L +C+ G ++ G ++
Sbjct: 279 VTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISL 338
Query: 299 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 358
+ +R L ++D+ + G + + K M E D+VI A +S +G +
Sbjct: 339 I-DRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVK 396
Query: 359 LAEFAI 364
L+ FA+
Sbjct: 397 LS-FAV 401
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 17/277 (6%)
Query: 80 VAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVT 139
VA ++ + H I HH+ DTF NL+++ + + + +F ++
Sbjct: 22 VACTVNHLKQIHVSLINHHLHH---DTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFL 78
Query: 140 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 199
+N+LI G+V N F + L LF + + GFTF V+ C R + +H L++
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 200 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIA 259
+ + +L+ +Y+ GR++ + ++FD + V W A+ +G G +AI
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 260 VFSRMEVENVLPDSITFVGILKACSHCGLVNEGR------EHFNIMQNRFLIQPQLEHYG 313
+F +M V PDS V +L AC H G ++ G E + +N F+
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFV-------RT 251
Query: 314 TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
T+V+L + G +E+A ++ +M VE D+V W ++
Sbjct: 252 TLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQG 287
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/376 (37%), Positives = 202/376 (53%), Gaps = 13/376 (3%)
Query: 79 LVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRD 136
L A + YA+C + A +F + + ++ +I A AR +F KM R+
Sbjct: 291 LSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERN 350
Query: 137 VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVH- 195
VV+WN LI GY +N + L LF + V P ++FA+++ CA L L H
Sbjct: 351 VVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHV 410
Query: 196 -----GLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF-DTVARDHVSVWNAMINGLA 249
G + + + + +L+DMY KCG ++ VF + RD VS WNAMI G A
Sbjct: 411 HVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS-WNAMIIGFA 469
Query: 250 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQL 309
+G +A+ +F M PD IT +G+L AC H G V EGR +F+ M F + P
Sbjct: 470 QNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLR 529
Query: 310 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISR 369
+HY MVDLLGRAG LEEA +MI+ MP++PD VIW +LL+AC++H L ++ +
Sbjct: 530 DHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLE 589
Query: 370 LE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQ 426
+E SG +VLLSNMY L W + VR M+ GV K+ G SWI++ H F D+
Sbjct: 590 VEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDK 649
Query: 427 SHAEMKAIHRVLEGLI 442
SH K IH +L+ LI
Sbjct: 650 SHPRKKQIHSLLDILI 665
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 154/304 (50%), Gaps = 5/304 (1%)
Query: 38 SLTDHSVFHRVLQRS-RASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIA 96
S TD S F ++L ++ + + HA +I G++ + LI Y++C
Sbjct: 15 SFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDG 74
Query: 97 HHVFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFL 154
VF ++ + ++ N V+ L K G D A +F MP RD TWN+++ G+ ++ R
Sbjct: 75 RQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCE 134
Query: 155 DGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALV 214
+ L F M + ++FASV++ C+ L + VH L+ + + + +ALV
Sbjct: 135 EALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALV 194
Query: 215 DMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSI 274
DMY+KCG ++ +++VFD + +V WN++I +G A++A+ VF M V PD +
Sbjct: 195 DMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEV 254
Query: 275 TFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIK 333
T ++ AC+ + G+E H +++N L + + VD+ + ++EA +
Sbjct: 255 TLASVISACASLSAIKVGQEVHGRVVKNDKL-RNDIILSNAFVDMYAKCSRIKEARFIFD 313
Query: 334 AMPV 337
+MP+
Sbjct: 314 SMPI 317
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 187/377 (49%), Gaps = 46/377 (12%)
Query: 15 LIHGAIKFGSLSESWSI--TQRSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHG 72
++ G K G L E+ S+ + T +S+ Q R A H + V
Sbjct: 92 VVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLN 151
Query: 73 YATYPSLVAAL--ISTYARCHQPH--IAHHVFSRVMDTFSKNLVIESLMKAGECDIARKV 128
++ S+++A ++ + Q H IA F + D + + +++ K G + A++V
Sbjct: 152 EYSFASVLSACSGLNDMNKGVQVHSLIAKSPF--LSDVYIGSALVDMYSKCGNVNDAQRV 209
Query: 129 FDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGAL 188
FD+M R+VV+WN+LI + +N ++ L +F+ ML + VEPD T ASV++ CA L A+
Sbjct: 210 FDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAI 269
Query: 189 CNAKWVHGLMLEK-RVKLNYILSAALVDMYAKCGRIDVSKQVFDT--------------- 232
+ VHG +++ +++ + ILS A VDMYAKC RI ++ +FD+
Sbjct: 270 KVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISG 329
Query: 233 ----------------VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
+A +V WNA+I G +G +A+++F ++ E+V P +F
Sbjct: 330 YAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSF 389
Query: 277 VGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHY----GTMVDLLGRAGNLEEACNM 331
ILKAC+ ++ G + H +++++ F Q E +++D+ + G +EE +
Sbjct: 390 ANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLV 449
Query: 332 IKAMPVEPDVVIWRALL 348
+ M +E D V W A++
Sbjct: 450 FRKM-MERDCVSWNAMI 465
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 99/252 (39%), Gaps = 77/252 (30%)
Query: 171 DGFTFASVVTGC--ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 228
D FA ++ C ++L A+ ++VH +++ + L+D Y+KCG ++ +Q
Sbjct: 18 DSSPFAKLLDSCIKSKLSAI-YVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 229 VFDTVARDHV-------------------------------SVWNAMINGLAVHGLALDA 257
VFD + + ++ WN+M++G A H +A
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 258 IAVFSRMEVENVLPDSITFVGILKACS--------------------------------- 284
+ F+ M E + + +F +L ACS
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 285 --HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEP 339
CG VN+ + F+ M +R ++ + +++ + G EA ++ + M VEP
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVS-----WNSLITCFEQNGPAVEALDVFQMMLESRVEP 251
Query: 340 DVVIWRALLSAC 351
D V +++SAC
Sbjct: 252 DEVTLASVISAC 263
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/361 (37%), Positives = 198/361 (54%), Gaps = 17/361 (4%)
Query: 94 HIAHHVFSRVMDTFSKNLVIESLMKAGECD---IARKVFDKMPVRDVVTWNTLIGGYVKN 150
H HV S ++D +SK G CD + KVF ++ D+V WNT+I GY N
Sbjct: 272 HQNSHVGSGLIDFYSK---------CGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMN 322
Query: 151 VRFLD-GLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYI- 208
+ ++ FR M PD +F V + C+ L + K +HGL ++ + N I
Sbjct: 323 EELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRIS 382
Query: 209 LSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVEN 268
++ AL+ +Y K G + ++ VFD + + +N MI G A HG +A+ ++ RM
Sbjct: 383 VNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSG 442
Query: 269 VLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEA 328
+ P+ ITFV +L AC+HCG V+EG+E+FN M+ F I+P+ EHY M+DLLGRAG LEEA
Sbjct: 443 IAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEA 502
Query: 329 CNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANI---SRLESGDFVLLSNMYCSL 385
I AMP +P V W ALL ACR H LAE A + L + +V+L+NMY
Sbjct: 503 ERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADA 562
Query: 386 KNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRA 445
+ W VR M+ +RKK G SWIE+ H F A D SH ++ ++ LE ++++
Sbjct: 563 RKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKM 622
Query: 446 K 446
K
Sbjct: 623 K 623
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 154/336 (45%), Gaps = 16/336 (4%)
Query: 44 VFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVF--S 101
F +L +S A D T HA + A+ L ++ Y++C + A F +
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 102 RVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR 161
+ FS N+++++ K + IAR++FD++P D V++NTLI GY + LF+
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 162 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 221
M E DGFT + ++ C L K +H + ++ A V Y+K G
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACCDRVDL--IKQLHCFSVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 222 RIDVSKQVFDTVA--RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGI 279
+ + VF + RD VS WN+MI H A+A++ M + D T +
Sbjct: 188 LLREAVSVFYGMDELRDEVS-WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246
Query: 280 LKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGT-MVDLLGRAGNLEEACNMIKAMP- 336
L A + + GR+ H +++ F Q H G+ ++D + G + + K
Sbjct: 247 LNALTSLDHLIGGRQFHGKLIKAGF---HQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQE 303
Query: 337 -VEPDVVIWRALLSACRIHGKKELAEFAIANISRLE 371
+ PD+V+W ++S ++ +EL+E A+ + +++
Sbjct: 304 ILSPDLVVWNTMISGYSMN--EELSEEAVKSFRQMQ 337
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 244 bits (623), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 131/344 (38%), Positives = 195/344 (56%), Gaps = 4/344 (1%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS-AEV 168
N V+ K G D AR VF+ +P DV++WNT+I GY +N + + ++ M E+
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEI 447
Query: 169 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 228
+ T+ SV+ C++ GAL +HG +L+ + L+ + +L DMY KCGR++ +
Sbjct: 448 AANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS 507
Query: 229 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 288
+F + R + WN +I HG A+ +F M E V PD ITFV +L ACSH GL
Sbjct: 508 LFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGL 567
Query: 289 VNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 348
V+EG+ F +MQ + I P L+HYG MVD+ GRAG LE A IK+M ++PD IW ALL
Sbjct: 568 VDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALL 627
Query: 349 SACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRK 405
SACR+HG +L + A ++ +E G VLLSNMY S W + +R++ G+RK
Sbjct: 628 SACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRK 687
Query: 406 KRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
G S +E+ + + F +Q+H + ++R L L + K G
Sbjct: 688 TPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIG 731
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 156/341 (45%), Gaps = 17/341 (4%)
Query: 73 YATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKM 132
Y T+PS++ A T ++ H F + D + +I + AR +FD+M
Sbjct: 153 YRTFPSVLKA-CRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEM 211
Query: 133 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 192
PVRD+ +WN +I GY ++ + L L G+ + D T S+++ C G
Sbjct: 212 PVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGV 267
Query: 193 WVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-ARDHVSVWNAMINGLAVH 251
+H ++ ++ +S L+D+YA+ GR+ ++VFD + RD +S WN++I ++
Sbjct: 268 TIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS-WNSIIKAYELN 326
Query: 252 GLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR--EHFNIMQNRFLIQPQL 309
L AI++F M + + PD +T + + S G + R + F + + FL +
Sbjct: 327 EQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITI 386
Query: 310 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISR 369
+ +V + + G ++ A + +P DV+ W ++S + + A AI +
Sbjct: 387 GN--AVVVMYAKLGLVDSARAVFNWLP-NTDVISWNTIISG---YAQNGFASEAIEMYNI 440
Query: 370 L-ESGDFVLLSNMYCS-LKNWHNAERVRNMMKIGGVRKKRG 408
+ E G+ + S L A +R MK+ G K G
Sbjct: 441 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNG 481
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 128/267 (47%), Gaps = 20/267 (7%)
Query: 120 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR-GMLSAEVEPDGFTFASV 178
G +AR FD + RDV WN +I GY + + +R F MLS+ + PD TF SV
Sbjct: 100 GNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSV 159
Query: 179 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 238
+ C + + +H L L+ + ++A+L+ +Y++ + ++ +FD + +
Sbjct: 160 LKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDM 216
Query: 239 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 298
WNAMI+G G A +A+ + + + DS+T V +L AC+ G N G +
Sbjct: 217 GSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRG-----V 267
Query: 299 MQNRFLIQPQLEH----YGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIH 354
+ + I+ LE ++DL G L + + M V D++ W +++ A ++
Sbjct: 268 TIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR-DLISWNSIIKAYELN 326
Query: 355 GK--KELAEFAIANISRLESGDFVLLS 379
+ + ++ F +SR++ L+S
Sbjct: 327 EQPLRAISLFQEMRLSRIQPDCLTLIS 353
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 86/172 (50%), Gaps = 13/172 (7%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
+D F + + K G + A +F ++P + V WNTLI + + + LF+ M
Sbjct: 484 LDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM 543
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAAL------VDMY 217
L V+PD TF ++++ C+ G + +W +M + +Y ++ +L VDMY
Sbjct: 544 LDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMM-----QTDYGITPSLKHYGCMVDMY 598
Query: 218 AKCGRIDVSKQVFDTVA-RDHVSVWNAMINGLAVHG-LALDAIAVFSRMEVE 267
+ G+++ + + +++ + S+W A+++ VHG + L IA EVE
Sbjct: 599 GRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE 650
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 7/173 (4%)
Query: 188 LCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMING 247
L +AK +H ++ + N +SA LV++Y G + +++ FD + V WN MI+G
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 248 LAVHGLALDAIAVFSRMEVENVL-PDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQ 306
G + + I FS + + L PD TF +LKAC +++ + H ++ F+
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR--TVIDGNKIHCLALKFGFMWD 184
Query: 307 PQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA-CRIHGKKE 358
+ +++ L R + A + MPV D+ W A++S C+ KE
Sbjct: 185 VYVA--ASLIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMISGYCQSGNAKE 234
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 243 bits (621), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 207/349 (59%), Gaps = 7/349 (2%)
Query: 108 SKNLVIESLMKAGECDIARKVFDKMPVR-DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 166
++N +I K GE D K+F +M R D VTWN++I GY+ N L L ML
Sbjct: 554 TENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQT 613
Query: 167 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
D F +A+V++ A + L VH + ++ + ++ +ALVDMY+KCGR+D +
Sbjct: 614 GQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYA 673
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKACSH 285
+ F+T+ + WN+MI+G A HG +A+ +F M+++ PD +TFVG+L ACSH
Sbjct: 674 LRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSH 733
Query: 286 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
GL+ EG +HF M + + + P++EH+ M D+LGRAG L++ + I+ MP++P+V+IWR
Sbjct: 734 AGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWR 793
Query: 346 ALLSA-CRIHGKK-ELAEFAIANISRLESG---DFVLLSNMYCSLKNWHNAERVRNMMKI 400
+L A CR +G+K EL + A + +LE ++VLL NMY + W + + R MK
Sbjct: 794 TVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKD 853
Query: 401 GGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
V+K+ G SW+ + D +H F A D+SH + I++ L+ L ++ + G
Sbjct: 854 ADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAG 902
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 95/184 (51%), Gaps = 4/184 (2%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D + N +I + ++ G+ ARKVFD+MP+R+ V+W ++ GY +N + L R M+
Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94
Query: 165 SAEVEPDGFTFASVVTGCARLGA--LCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC-G 221
+ + + F SV+ C +G+ + + +HGLM + ++ ++S L+ MY KC G
Sbjct: 95 KEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIG 154
Query: 222 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL- 280
+ + F + + WN++I+ + G A +FS M+ + P TF ++
Sbjct: 155 SVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT 214
Query: 281 KACS 284
ACS
Sbjct: 215 TACS 218
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 140/311 (45%), Gaps = 23/311 (7%)
Query: 57 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM----------DT 106
D +A + + + G +L++T +P + + ++M D
Sbjct: 186 DQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDV--RLLEQIMCTIQKSGLLTDL 243
Query: 107 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 166
F + ++ + K+G ARKVF++M R+ VT N L+ G V+ + +LF M S
Sbjct: 244 FVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM 303
Query: 167 -EVEPDGFTF---ASVVTGCARLGALCNAKWVHG-LMLEKRVKLNYILSAALVDMYAKCG 221
+V P+ + + A L + VHG ++ V + LV+MYAKCG
Sbjct: 304 IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCG 363
Query: 222 RIDVSKQVFDTVA-RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL 280
I +++VF + +D VS WN+MI GL +G ++A+ + M ++LP S T + L
Sbjct: 364 SIADARRVFYFMTDKDSVS-WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSL 422
Query: 281 KACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEP 339
+C+ G++ H + + I + ++ L G L E + +MP E
Sbjct: 423 SSCASLKWAKLGQQIHGESL--KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EH 479
Query: 340 DVVIWRALLSA 350
D V W +++ A
Sbjct: 480 DQVSWNSIIGA 490
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 127/270 (47%), Gaps = 10/270 (3%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N ++ K G AR+VF M +D V+WN++I G +N F++ + ++ M ++
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
P FT S ++ CA L + +HG L+ + LN +S AL+ +YA+ G ++ +++
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 230 FDTVARDHVSVWNAMINGLAVHGLAL-DAIAVFSRMEVENVLPDSITFVGILKACSHCGL 288
F ++ WN++I LA +L +A+ F + + ITF +L A S
Sbjct: 473 FSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSF 532
Query: 289 VNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 347
G++ H ++N + E+ ++ G+ G ++ + M D V W ++
Sbjct: 533 GELGKQIHGLALKNNIADEATTEN--ALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSM 590
Query: 348 LSACRIHGK-----KELAEFAIANISRLES 372
+S IH + +L F + RL+S
Sbjct: 591 ISG-YIHNELLAKALDLVWFMLQTGQRLDS 619
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 63 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 122
+T +L YAT S A+ ++T R + H D + +++ K G
Sbjct: 612 QTGQRLDSFMYATVLSAFAS-VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRL 670
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM-LSAEVEPDGFTFASVVTG 181
D A + F+ MPVR+ +WN++I GY ++ + + L+LF M L + PD TF V++
Sbjct: 671 DYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSA 730
Query: 182 CARLGAL 188
C+ G L
Sbjct: 731 CSHAGLL 737
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 118/274 (43%), Gaps = 14/274 (5%)
Query: 92 QPHIAHHVFSRVMDTFSKNLVIESLMKA-GECDIARKVFDKMPVRDVVTWNTLIGGYVKN 150
Q H S +D N++I K G A F + V++ V+WN++I Y +
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 151 VRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLM--LEKRVKL-NY 207
R+F M P +TF S+VT L + + + +M ++K L +
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEP-DVRLLEQIMCTIQKSGLLTDL 243
Query: 208 ILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM-EV 266
+ + LV +AK G + +++VF+ + + N ++ GL +A +F M +
Sbjct: 244 FVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM 303
Query: 267 ENVLPDSITFVGILKACSHCGLVNE-----GREHFNIMQNRFLIQPQLEHYGTMVDLLGR 321
+V P+S +V +L + L E GRE + L+ + +V++ +
Sbjct: 304 IDVSPES--YVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAK 361
Query: 322 AGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
G++ +A + M + D V W ++++ +G
Sbjct: 362 CGSIADARRVFYFM-TDKDSVSWNSMITGLDQNG 394
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/415 (35%), Positives = 223/415 (53%), Gaps = 6/415 (1%)
Query: 41 DHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVF 100
D+ F +++ S +TH++++ G+ + +L+ YA C A +F
Sbjct: 116 DNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIF 175
Query: 101 SRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLR 158
++ D S ++ K G + AR++FD+MP R++ TW+ +I GY KN F +
Sbjct: 176 GQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAID 235
Query: 159 LFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYA 218
LF M V + SV++ CA LGAL + + +++ + +N IL ALVDM+
Sbjct: 236 LFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFW 295
Query: 219 KCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVG 278
+CG I+ + VF+ + W+++I GLAVHG A A+ FS+M +P +TF
Sbjct: 296 RCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTA 355
Query: 279 ILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE 338
+L ACSH GLV +G E + M+ I+P+LEHYG +VD+LGRAG L EA N I M V+
Sbjct: 356 VLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVK 415
Query: 339 PDVVIWRALLSACRIHGKKELAEFA---IANISRLESGDFVLLSNMYCSLKNWHNAERVR 395
P+ I ALL AC+I+ E+AE + + SG +VLLSN+Y W E +R
Sbjct: 416 PNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLR 475
Query: 396 NMMKIGGVRKKRGKSWIELGDSIHQFNAA-DQSHAEMKAIHRVLEGLIQRAKFDG 449
+MMK V+K G S IE+ I++F DQ H EM I R E ++ + + G
Sbjct: 476 DMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIG 530
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 117/264 (44%), Gaps = 37/264 (14%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
A +F ++ ++ +N LI + + ML + + PD TF ++ +
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYA-------------------------- 218
+ + + H ++ + + + +LV MYA
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 219 -----KCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDS 273
KCG ++ ++++FD + ++ W+ MING A + AI +F M+ E V+ +
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 274 ITFVGILKACSHCGLVNEG-REHFNIMQNRFLIQPQLEHYGT-MVDLLGRAGNLEEACNM 331
V ++ +C+H G + G R + ++++ + L GT +VD+ R G++E+A ++
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLIL---GTALVDMFWRCGDIEKAIHV 306
Query: 332 IKAMPVEPDVVIWRALLSACRIHG 355
+ +P E D + W +++ +HG
Sbjct: 307 FEGLP-ETDSLSWSSIIKGLAVHG 329
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 241 bits (616), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 194/340 (57%), Gaps = 3/340 (0%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N I K G+ + K+F+ + ++++V+WNT+I +++N GL F E
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
PD TF +V+ C +G + A+ +HGL++ N ++ AL+D+Y+K GR++ S V
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTV 292
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 289
F + W AM+ A HG DAI F M + PD +TF +L ACSH GLV
Sbjct: 293 FHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLV 352
Query: 290 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 349
EG+ +F M R+ I P+L+HY MVDLLGR+G L++A +IK MP+EP +W ALL
Sbjct: 353 EEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLG 412
Query: 350 ACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKK 406
ACR++ +L A + LE D +V+LSN+Y + W +A R+RN+MK G+ +
Sbjct: 413 ACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRA 472
Query: 407 RGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 446
G S+IE G+ IH+F D SH E + I + L+ + ++ K
Sbjct: 473 SGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMK 512
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 137/285 (48%), Gaps = 12/285 (4%)
Query: 80 VAALISTYARCHQPHIAHHVFSRVMDT------FSKNLVIESLMKAGECDIARKVFDKMP 133
V++LI+ C + + +V+ + F + ++ ++ G A K+FD+MP
Sbjct: 34 VSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMP 93
Query: 134 VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV--EPDGFTFASVVTGCARLGALCNA 191
RD+V+WN+LI GY + M+ +EV P+ TF S+++ C G+
Sbjct: 94 ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEG 153
Query: 192 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 251
+ +HGL+++ V + A ++ Y K G + S ++F+ ++ ++ WN MI +
Sbjct: 154 RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQN 213
Query: 252 GLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLE 310
GLA +A F+ PD TF+ +L++C G+V + H IM F +
Sbjct: 214 GLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCIT 273
Query: 311 HYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
++DL + G LE++ + + PD + W A+L+A HG
Sbjct: 274 --TALLDLYSKLGRLEDSSTVFHEI-TSPDSMAWTAMLAAYATHG 315
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 241 bits (615), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 130/375 (34%), Positives = 212/375 (56%), Gaps = 15/375 (4%)
Query: 82 ALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVT 139
+I Y +C A VF + D S +I + + G + A ++F+ +P +D+V
Sbjct: 189 TMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVA 248
Query: 140 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWV-HGLM 198
W ++ G+ +N + + L F M + + D T A ++ CA+LGA +K+ +
Sbjct: 249 WTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGA---SKYADRAVQ 305
Query: 199 LEKRVKLN----YILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLA 254
+ ++ + ++ +AL+DMY+KCG ++ + VF ++ +V +++MI GLA HG A
Sbjct: 306 IAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRA 365
Query: 255 LDAIAVFSRMEVEN-VLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG 313
+A+ +F M + + P+++TFVG L ACSH GLV++GR+ F+ M F +QP +HY
Sbjct: 366 QEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYT 425
Query: 314 TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLES- 372
MVDLLGR G L+EA +IK M VEP +W ALL ACRIH E+AE A ++ LE
Sbjct: 426 CMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPD 485
Query: 373 --GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSW-IELGDSIHQFNAADQSHA 429
G+++LLSN+Y S +W RVR ++K G++K SW ++ +H+F + +H
Sbjct: 486 IIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHP 545
Query: 430 EMKAIHRVLEGLIQR 444
I LE L++R
Sbjct: 546 MSNKIQDKLEELVER 560
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 132/322 (40%), Gaps = 41/322 (12%)
Query: 79 LVAALISTYARC----HQPHIAHHVFSRVMDT--FSKNLVIESLMKAGEC--DIARKVFD 130
LV++LIS C I HV + +D + +I +L K G AR+V +
Sbjct: 48 LVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 131 KMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCN 190
+ R+ W +I GY +F + + ++ M E+ P FTF++++ C + L
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 191 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVS---------- 239
+ H R + ++DMY KC ID +++VFD + RD +S
Sbjct: 168 GRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYAR 227
Query: 240 --------------------VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGI 279
W AM+ G A + +A+ F RME + D +T G
Sbjct: 228 VGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGY 287
Query: 280 LKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGT-MVDLLGRAGNLEEACNMIKAMPVE 338
+ AC+ G I Q G+ ++D+ + GN+EEA N+ +M
Sbjct: 288 ISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN-N 346
Query: 339 PDVVIWRALLSACRIHGKKELA 360
+V + +++ HG+ + A
Sbjct: 347 KNVFTYSSMILGLATHGRAQEA 368
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 241 bits (615), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 202/387 (52%), Gaps = 34/387 (8%)
Query: 63 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 122
+ HA+ V G+++ AL++ Y+RC G+
Sbjct: 612 QIHAQACVSGFSSDLPFQNALVTLYSRC-----------------------------GKI 642
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
+ + F++ D + WN L+ G+ ++ + LR+F M ++ + FTF S V
Sbjct: 643 EESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAA 702
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI-DVSKQVFDTVARDHVSVW 241
+ + K VH ++ + + AL+ MYAKCG I D KQ + ++ VS W
Sbjct: 703 SETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS-W 761
Query: 242 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 301
NA+IN + HG +A+ F +M NV P+ +T VG+L ACSH GLV++G +F M +
Sbjct: 762 NAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNS 821
Query: 302 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAE 361
+ + P+ EHY +VD+L RAG L A I+ MP++PD ++WR LLSAC +H E+ E
Sbjct: 822 EYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGE 881
Query: 362 FAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSI 418
FA ++ LE D +VLLSN+Y K W + R MK GV+K+ G+SWIE+ +SI
Sbjct: 882 FAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSI 941
Query: 419 HQFNAADQSHAEMKAIHRVLEGLIQRA 445
H F DQ+H IH + L +RA
Sbjct: 942 HSFYVGDQNHPLADEIHEYFQDLTKRA 968
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 128/242 (52%), Gaps = 4/242 (1%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N +I+ + G D+AR+VFD + ++D +W +I G KN + +RLF M +
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
P + F+SV++ C ++ +L + +HGL+L+ + + ALV +Y G + ++ +
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 289
F +++ +N +INGL+ G A+ +F RM ++ + PDS T ++ ACS G +
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL 405
Query: 290 NEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 348
G++ H + F ++E G +++L + ++E A + VE +VV+W +L
Sbjct: 406 FRGQQLHAYTTKLGFASNNKIE--GALLNLYAKCADIETALDYFLETEVE-NVVLWNVML 462
Query: 349 SA 350
A
Sbjct: 463 VA 464
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 145/324 (44%), Gaps = 20/324 (6%)
Query: 39 LTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHH 98
L DHS + ++ + A + + V G P ++++S + I
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 99 VFSRVM------DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVR 152
+ V+ DT+ N ++ G A +F M RD VT+NTLI G +
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 153 FLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAA 212
+ LF+ M +EPD T AS+V C+ G L + +H + N + A
Sbjct: 370 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 429
Query: 213 LVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALD---AIAVFSRMEVENV 269
L+++YAKC I+ + F ++V +WN M L +GL D + +F +M++E +
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVM---LVAYGLLDDLRNSFRIFRQMQIEEI 486
Query: 270 LPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHY--GTMVDLLGRAGNLE 326
+P+ T+ ILK C G + G + H I++ F QL Y ++D+ + G L+
Sbjct: 487 VPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF----QLNAYVCSVLIDMYAKLGKLD 542
Query: 327 EACNMIKAMPVEPDVVIWRALLSA 350
A +++ + DVV W +++
Sbjct: 543 TAWDILIRFAGK-DVVSWTTMIAG 565
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 119/268 (44%), Gaps = 8/268 (2%)
Query: 98 HVFSRVMDTFSKNLVIESLM----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRF 153
H ++ + S N + +L+ K + + A F + V +VV WN ++ Y
Sbjct: 412 HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDL 471
Query: 154 LDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAAL 213
+ R+FR M E+ P+ +T+ S++ C RLG L + +H +++ +LN + + L
Sbjct: 472 RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVL 531
Query: 214 VDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDS 273
+DMYAK G++D + + A V W MI G + A+ F +M + D
Sbjct: 532 IDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDE 591
Query: 274 ITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMI 332
+ + AC+ + EG++ H + F L +V L R G +EE+
Sbjct: 592 VGLTNAVSACAGLQALKEGQQIHAQACVSGF--SSDLPFQNALVTLYSRCGKIEESYLAF 649
Query: 333 KAMPVEPDVVIWRALLSACRIHGKKELA 360
+ D + W AL+S + G E A
Sbjct: 650 EQTEA-GDNIAWNALVSGFQQSGNNEEA 676
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 123/272 (45%), Gaps = 48/272 (17%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
A KVFD+MP R + TWN +I + LF M+S V P+ TF+ V+ C R
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-R 197
Query: 185 LGALCN--AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-ARDHVSVW 241
G++ + +H +L + ++ + ++ L+D+Y++ G +D++++VFD + +DH S W
Sbjct: 198 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS-W 256
Query: 242 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS----------------- 284
AMI+GL+ + +AI +F M V ++P F +L AC
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 285 ------------------HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLE 326
H G + F+ M R + Y T+++ L + G E
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT-----YNTLINGLSQCGYGE 371
Query: 327 EACNMIKAM---PVEPDVVIWRALLSACRIHG 355
+A + K M +EPD +L+ AC G
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 14/190 (7%)
Query: 168 VEPDGFTFASVVTGCARL-GALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
+ P+ T ++ GC + G+L + +H +L+ + N LS L D Y G + +
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 286
+VFD + + WN MI LA L + +F RM ENV P+ TF G+L+AC
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG- 198
Query: 287 GLVNEGREHFNIMQN---RFLIQPQLEHY---GTMVDLLGRAGNLEEACNMIKAMPVEPD 340
G F++++ R L Q + ++DL R G ++ A + + ++ D
Sbjct: 199 -----GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK-D 252
Query: 341 VVIWRALLSA 350
W A++S
Sbjct: 253 HSSWVAMISG 262
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 205/338 (60%), Gaps = 6/338 (1%)
Query: 110 NLVIESLMKAGE--CDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 167
N ++++ K GE +ARK+FD++ +D V++N+++ Y ++ + +FR ++ +
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNK 281
Query: 168 VEP-DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
V + T ++V+ + GAL K +H ++ ++ + I+ +++DMY KCGR++ +
Sbjct: 282 VVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 286
++ FD + +V W AMI G +HG A A+ +F M V P+ ITFV +L ACSH
Sbjct: 342 RKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHA 401
Query: 287 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 346
GL EG FN M+ RF ++P LEHYG MVDLLGRAG L++A ++I+ M ++PD +IW +
Sbjct: 402 GLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSS 461
Query: 347 LLSACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGV 403
LL+ACRIH ELAE ++A + L+S G ++LLS++Y W + ERVR +MK G+
Sbjct: 462 LLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGL 521
Query: 404 RKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGL 441
K G S +EL +H F D+ H + + I+ L L
Sbjct: 522 VKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAEL 559
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 161/321 (50%), Gaps = 18/321 (5%)
Query: 49 LQRSRASMDSTTAAKTHAKLIVHGY-ATYPSLVAALISTYA--RCHQPHIAHHVFSRVMD 105
L RS S ++ A + KL ++ +++P + A S + Q H VF D
Sbjct: 51 LARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSD 110
Query: 106 TFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 165
F + +I G+ + ARKVFD++P R++V+W ++I GY N LD + LF+ +L
Sbjct: 111 IFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLV 170
Query: 166 AEVEPDGFTF------ASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK 219
E + D F SV++ C+R+ A + +H ++++ + L+D YAK
Sbjct: 171 DENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAK 230
Query: 220 CGR--IDVSKQVFDT-VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLP-DSIT 275
G + V++++FD V +D VS +N++++ A G++ +A VF R+ V+ ++IT
Sbjct: 231 GGEGGVAVARKIFDQIVDKDRVS-YNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAIT 289
Query: 276 FVGILKACSHCGLVNEGR-EHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKA 334
+L A SH G + G+ H ++ R ++ + +++D+ + G +E A
Sbjct: 290 LSTVLLAVSHSGALRIGKCIHDQVI--RMGLEDDVIVGTSIIDMYCKCGRVETARKAFDR 347
Query: 335 MPVEPDVVIWRALLSACRIHG 355
M +V W A+++ +HG
Sbjct: 348 MK-NKNVRSWTAMIAGYGMHG 367
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 81/155 (52%), Gaps = 6/155 (3%)
Query: 136 DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVH 195
DV +WN++I ++ + L F M + P +F + C+ L + + K H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 196 GLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLAL 255
+ + +S+AL+ MY+ CG+++ +++VFD + + ++ W +MI G ++G AL
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 256 DAIAVFSRMEVEN------VLPDSITFVGILKACS 284
DA+++F + V+ + DS+ V ++ ACS
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 160/459 (34%), Positives = 243/459 (52%), Gaps = 39/459 (8%)
Query: 16 IHGAIKFGSL-SESWSITQR---SSHSLTDHSVFHR---------------VLQRSRASM 56
IHG I SL ++S+ I++ SS SL F R +L R +S
Sbjct: 32 IHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSS 91
Query: 57 DSTTAA-----KTHAKLIVHGYATYPSLVAALIS----TYARCHQPHIAHHVFSRVMDTF 107
DS + + + I T+P L+ A S T R Q + H F D +
Sbjct: 92 DSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFD--FDVY 149
Query: 108 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 167
N +I + ARKVFD+M R+VV+WN+++ V+N + F M+
Sbjct: 150 VGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKR 209
Query: 168 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 227
PD T +++ C G L K VH ++ + ++LN L ALVDMYAK G ++ ++
Sbjct: 210 FCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYAR 267
Query: 228 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVEN-VLPDSITFVGILKACSHC 286
VF+ + +V W+AMI GLA +G A +A+ +FS+M E+ V P+ +TF+G+L ACSH
Sbjct: 268 LVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHT 327
Query: 287 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 346
GLV++G ++F+ M+ I+P + HYG MVD+LGRAG L EA + IK MP EPD V+WR
Sbjct: 328 GLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRT 387
Query: 347 LLSACRIH------GKKELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKI 400
LLSAC IH G E + + + SG+ V+++N + + W A VR +MK
Sbjct: 388 LLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKE 447
Query: 401 GGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLE 439
++K G+S +ELG S H+F + +E +I+ +L+
Sbjct: 448 TKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLD 486
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 192/339 (56%), Gaps = 4/339 (1%)
Query: 112 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 171
++++ +K G+ + A KVF + +D+V W+ ++ GY + +++F + ++P+
Sbjct: 434 LLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPN 493
Query: 172 GFTFASVVTGCARLGA-LCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF 230
FTF+S++ CA A + K HG ++ R+ + +S+AL+ MYAK G I+ +++VF
Sbjct: 494 EFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVF 553
Query: 231 DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVN 290
+ WN+MI+G A HG A+ A+ VF M+ V D +TF+G+ AC+H GLV
Sbjct: 554 KRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVE 613
Query: 291 EGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
EG ++F+IM I P EH MVDL RAG LE+A +I+ MP IWR +L+A
Sbjct: 614 EGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAA 673
Query: 351 CRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKR 407
CR+H K EL A I ++ D +VLLSNMY +W +VR +M V+K+
Sbjct: 674 CRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEP 733
Query: 408 GKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 446
G SWIE+ + + F A D+SH I+ LE L R K
Sbjct: 734 GYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLK 772
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 145/321 (45%), Gaps = 32/321 (9%)
Query: 41 DHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVF 100
D S+F VL+ S D + H + I G+ S+ +L+ TY
Sbjct: 92 DCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTY------------- 138
Query: 101 SRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLF 160
MK RKVFD+M R+VVTW TLI GY +N + L LF
Sbjct: 139 ----------------MKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLF 182
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
M + +P+ FTFA+ + A G VH ++++ + +S +L+++Y KC
Sbjct: 183 MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 242
Query: 221 GRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL 280
G + ++ +FD V WN+MI+G A +GL L+A+ +F M + V +F ++
Sbjct: 243 GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVI 302
Query: 281 KACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEP 339
K C++ + + H ++++ FL + ++ + + +A + K +
Sbjct: 303 KLCANLKELRFTEQLHCSVVKYGFLFDQNIRT--ALMVAYSKCTAMLDALRLFKEIGCVG 360
Query: 340 DVVIWRALLSACRIHGKKELA 360
+VV W A++S + KE A
Sbjct: 361 NVVSWTAMISGFLQNDGKEEA 381
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 124/253 (49%), Gaps = 9/253 (3%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N +I +K G AR +FDK V+ VVTWN++I GY N L+ L +F M V
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVR 292
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
+FASV+ CA L L + +H +++ + + AL+ Y+KC + + ++
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352
Query: 230 FDTVA-RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 288
F + +V W AMI+G + +A+ +FS M+ + V P+ T+ IL A +
Sbjct: 353 FKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP---V 409
Query: 289 VNEGREHFNIMQNRFLIQPQLEHYGT-MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 347
++ H +++ + + GT ++D + G +EEA + + + D+V W A+
Sbjct: 410 ISPSEVHAQVVKTNY---ERSSTVGTALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAM 465
Query: 348 LSACRIHGKKELA 360
L+ G+ E A
Sbjct: 466 LAGYAQTGETEAA 478
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 105/223 (47%), Gaps = 5/223 (2%)
Query: 134 VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKW 193
V +VV+W +I G+++N + + LF M V P+ FT++ ++T + +
Sbjct: 359 VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISPSE 414
Query: 194 VHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGL 253
VH +++ + + + AL+D Y K G+++ + +VF + + W+AM+ G A G
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 474
Query: 254 ALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG 313
AI +F + + P+ TF IL C+ + F+ + + L
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSS 534
Query: 314 TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
++ + + GN+E A + K E D+V W +++S HG+
Sbjct: 535 ALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQHGQ 576
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 111/232 (47%), Gaps = 4/232 (1%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
A +FDK P RD ++ +L+ G+ ++ R + RLF + +E D F+SV+ A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 244
L + +H ++ + + +LVD Y K ++VFD + +V W +
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 245 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRF 303
I+G A + + + + +F RM+ E P+S TF L + G+ G + H +++N
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG- 224
Query: 304 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
+ + ++++L + GN+ +A + V+ VV W +++S +G
Sbjct: 225 -LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISGYAANG 274
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 202/326 (61%), Gaps = 14/326 (4%)
Query: 108 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM-LSA 166
+ N +I+ +K + A +VF ++ +D V+WN++I G V R + + LF M S+
Sbjct: 241 TGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSS 300
Query: 167 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
++PDG SV++ CA LGA+ + +WVH +L +K + + A+VDMYAKCG I+ +
Sbjct: 301 GIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETA 360
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 286
++F+ + +V WNA++ GLA+HG L+++ F M P+ +TF+ L AC H
Sbjct: 361 LEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHT 420
Query: 287 GLVNEGREHFNIMQNR-FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
GLV+EGR +F+ M++R + + P+LEHYG M+DLL RAG L+EA ++KAMPV+PDV I
Sbjct: 421 GLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICG 480
Query: 346 ALLSACRIHG-----KKELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKI 400
A+LSAC+ G KE+ + + +I +SG +VLLSN++ + + W + R+R +MK+
Sbjct: 481 AILSACKNRGTLMELPKEILD-SFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKV 539
Query: 401 GGVRKKRGKSWIELGDSIHQFNAADQ 426
G+ K G S+IE +F DQ
Sbjct: 540 KGISKVPGSSYIE------KFMTLDQ 559
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 132/256 (51%), Gaps = 14/256 (5%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D + +N ++ GE A KVF +MPVRDVV+W +I G+ + + + L F M
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM- 198
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
+VEP+ T+ V+ R+G L K +HGL+L++ ++ AL+DMY KC ++
Sbjct: 199 --DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLS 256
Query: 225 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVEN-VLPDSITFVGILKAC 283
+ +VF + + WN+MI+GL + +AI +FS M+ + + PD +L AC
Sbjct: 257 DAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSAC 316
Query: 284 SHCGLVNEGREHFNIMQNRFLIQPQLE---HYGT-MVDLLGRAGNLEEACNMIKAMPVEP 339
+ G V+ GR + +++ ++ H GT +VD+ + G +E A + +
Sbjct: 317 ASLGAVDHGR-----WVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIR-SK 370
Query: 340 DVVIWRALLSACRIHG 355
+V W ALL IHG
Sbjct: 371 NVFTWNALLGGLAIHG 386
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 7/213 (3%)
Query: 139 TWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLM 198
++NTL+ Y + + ++ +S PD FTF V C + + K +HG++
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 199 LEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAI 258
+ + + +LV Y CG + +VF + V W +I G GL +A+
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 259 AVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVD 317
FS+M+VE P+ T+V +L + G ++ G+ H I++ LI LE ++D
Sbjct: 193 DTFSKMDVE---PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLI--SLETGNALID 247
Query: 318 LLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
+ + L +A + + + D V W +++S
Sbjct: 248 MYVKCEQLSDAMRVFGELE-KKDKVSWNSMISG 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 98/227 (43%), Gaps = 11/227 (4%)
Query: 2 NNETRTMLIKLQRLIHGAIKFGSLSESWSITQRSSHSLTDHSVFHRVLQRSRASMDSTTA 61
N M +K ++L FG L + ++ S S H +RS+ ++D +
Sbjct: 242 GNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHC------ERSKEAIDLFSL 295
Query: 62 AKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKA 119
+T + + G+ S+++A S A H + ++ + + DT +++ K
Sbjct: 296 MQTSSGIKPDGH-ILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKC 354
Query: 120 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVV 179
G + A ++F+ + ++V TWN L+GG + L+ LR F M+ +P+ TF + +
Sbjct: 355 GYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAAL 414
Query: 180 TGCARLGALCNAKWVHGLMLEKRVKLNYILS--AALVDMYAKCGRID 224
C G + + M + L L ++D+ + G +D
Sbjct: 415 NACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLD 461
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 238 bits (608), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 193/344 (56%), Gaps = 8/344 (2%)
Query: 75 TYPSLVAA-----LISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVF 129
TYPSL A + R H+ + D F + ++ G+ AR +F
Sbjct: 114 TYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLF 173
Query: 130 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 189
+++ D+ TWNTL+ Y + + + +V P+ + +++ CA LG
Sbjct: 174 ERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFV 233
Query: 190 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLA 249
W H +L+ + LN + +L+D+Y+KCG + +++VFD +++ VS +NAMI GLA
Sbjct: 234 RGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLA 293
Query: 250 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQL 309
VHG + I ++ + + ++PDS TFV + ACSH GLV+EG + FN M+ + I+P++
Sbjct: 294 VHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKV 353
Query: 310 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISR 369
EHYG +VDLLGR+G LEEA IK MPV+P+ +WR+ L + + HG E E A+ ++
Sbjct: 354 EHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLG 413
Query: 370 LE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKS 410
LE SG++VLLSN+Y + W + E+ R +MK V K G S
Sbjct: 414 LEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 129/347 (37%), Positives = 199/347 (57%), Gaps = 8/347 (2%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N +I L + GE AR+VFD M R+ +W T+I + +N L+ L LF M V
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
P T S+++ CA L +L + K VH ++ + ++ +++ L+ MY KCG + SK +
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKACSHCGL 288
FD + +WN++I+G A HGL +A+ VF M + + P+ +TFV L ACS+ G+
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 289 VNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 348
V EG + + M++ F ++P HY MVD+LGRAG EA MI +M VEPD +W +LL
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
Query: 349 SACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRK 405
ACR H + ++AEF + +E SG ++LLSNMY S W + +R +MK VRK
Sbjct: 509 GACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRK 568
Query: 406 KRGKSWIELGDSIHQFNAAD-QSHAEMKAIHRV---LEGLIQRAKFD 448
G SW E+ + +H F SH E ++I ++ L+GL++ A ++
Sbjct: 569 SPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYN 615
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 129/257 (50%), Gaps = 12/257 (4%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D ++ +I L K G D AR++FD+M R V+TW T++ GY +N R D ++F M
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM- 229
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
E ++ S++ G + G + +A+ + +M K V I A++ + G I
Sbjct: 230 ---PEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPV----IACNAMISGLGQKGEIA 282
Query: 225 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
+++VFD++ + + W +I +G L+A+ +F M+ + V P T + IL C+
Sbjct: 283 KARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCA 342
Query: 285 HCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 343
++ G++ H +++ +F + + ++ + + G L ++ + P + D+++
Sbjct: 343 SLASLHHGKQVHAQLVRCQFDVDVYVA--SVLMTMYIKCGELVKSKLIFDRFPSK-DIIM 399
Query: 344 WRALLSACRIHGKKELA 360
W +++S HG E A
Sbjct: 400 WNSIISGYASHGLGEEA 416
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 131/279 (46%), Gaps = 27/279 (9%)
Query: 82 ALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGECDIARKVFDKMPVRDVVT 139
++++ Y P A +F + D S N ++ MK GE D ARKVFD MP R+VV+
Sbjct: 53 SMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVS 112
Query: 140 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 199
W L+ GYV N + LF M E + ++ ++ G + G + +A ++ ++
Sbjct: 113 WTALVKGYVHNGKVDVAESLFWKM----PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIP 168
Query: 200 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIA 259
+K + I +++ K GR+D ++++FD ++ V W M+ G + DA
Sbjct: 169 DK----DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARK 224
Query: 260 VFSRMEVENVLPD--SITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVD 317
+F +V+P+ +++ +L G + + E F +M + +I M+
Sbjct: 225 IF------DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIA-----CNAMIS 273
Query: 318 LLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
LG+ G + +A + +M D W+ ++ +IH +
Sbjct: 274 GLGQKGEIAKARRVFDSMKERNDAS-WQTVI---KIHER 308
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 122/265 (46%), Gaps = 22/265 (8%)
Query: 99 VFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLR 158
+S + + N+ I L + G+ ARK+FD + + +WN+++ GY N+ D +
Sbjct: 10 TYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARK 69
Query: 159 LFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYA 218
LF M + ++ +V+G + G + A+ V LM E+ N + ALV Y
Sbjct: 70 LFDEMPDRNI----ISWNGLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYV 121
Query: 219 KCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLP--DSITF 276
G++DV++ +F + + W M+ G G DA ++ ++P D+I
Sbjct: 122 HNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY------EMIPDKDNIAR 175
Query: 277 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP 336
++ G V+E RE F+ M R +I + TMV G+ +++A + MP
Sbjct: 176 TSMIHGLCKEGRVDEAREIFDEMSERSVIT-----WTTMVTGYGQNNRVDDARKIFDVMP 230
Query: 337 VEPDVVIWRALLSACRIHGKKELAE 361
E V W ++L +G+ E AE
Sbjct: 231 -EKTEVSWTSMLMGYVQNGRIEDAE 254
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 104/215 (48%), Gaps = 15/215 (6%)
Query: 74 ATYPSLVAAL--ISTYARCHQPHIAHHVFSRV---MDTFSKNLVIESLMKAGECDIARKV 128
T+P+L++ L ++ A H H R +D + ++++ +K GE ++ +
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 129 FDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM-LSAEVEPDGFTFASVVTGCARLGA 187
FD+ P +D++ WN++I GY + + L++F M LS +P+ TF + ++ C+ G
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 188 LCNAKWVHGLMLE----KRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWN 242
+ ++ M K + +Y A +VDM + GR + + ++ D++ +VW
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHY---ACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWG 505
Query: 243 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFV 277
+++ H LD ++ +E +S T++
Sbjct: 506 SLLGACRTHS-QLDVAEFCAKKLIEIEPENSGTYI 539
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 192/333 (57%), Gaps = 5/333 (1%)
Query: 119 AGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 178
+GE + A KVF++MP R+VV+W +I G+ + R L+L+ M + +P+ +TF ++
Sbjct: 168 SGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTAL 227
Query: 179 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 238
++ C GAL + VH L +K +S +L+ MY KCG + + ++FD + V
Sbjct: 228 LSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDV 287
Query: 239 SVWNAMINGLAVHGLALDAIAVFS-RMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 297
WN+MI G A HGLA+ AI +F M PD+IT++G+L +C H GLV EGR+ FN
Sbjct: 288 VSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFN 347
Query: 298 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 357
+M L +P+L HY +VDLLGR G L+EA +I+ MP++P+ VIW +LL +CR+HG
Sbjct: 348 LMAEHGL-KPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDV 406
Query: 358 ELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIEL 414
A LE + V L+N+Y S+ W A VR +MK G++ G SWIE+
Sbjct: 407 WTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEI 466
Query: 415 GDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKF 447
+ + F A D S+ M I VL LI +F
Sbjct: 467 NNYVFMFKAEDGSNCRMLEIVHVLHCLIDHMEF 499
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 165 SAEVEPDGFTF-----ASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK 219
S+ V+ DG++F +S V C H L L+ + L ++LV +Y
Sbjct: 108 SSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRD 167
Query: 220 CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGI 279
G ++ + +VF+ + +V W AMI+G A + ++S+M P+ TF +
Sbjct: 168 SGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTAL 227
Query: 280 LKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE 338
L AC+ G + +GR H + ++ L +++ + + G+L++A +
Sbjct: 228 LSACTGSGALGQGRSVHCQTLH--MGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-N 284
Query: 339 PDVVIWRALLSACRIHG 355
DVV W ++++ HG
Sbjct: 285 KDVVSWNSMIAGYAQHG 301
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 217/397 (54%), Gaps = 13/397 (3%)
Query: 59 TTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTF--SKNLVIESL 116
+ A K H +I G+ Y ALI Y + + A H+F ++ + S N +I S
Sbjct: 311 SIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSF 370
Query: 117 MKAGECDIARKVFDKMPVRD--------VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV 168
+ AG+ D A +F ++ + VVTW ++I G R D L FR M ++V
Sbjct: 371 VDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKV 430
Query: 169 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 228
+ T +++ CA L AL + +HG ++ + N ++ ALV+MYAKCG +
Sbjct: 431 LANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSL 490
Query: 229 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 288
VF+ + + WN++I G +HG A A+++F RM PD I V +L ACSH GL
Sbjct: 491 VFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGL 550
Query: 289 VNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 348
V +GRE F M RF ++PQ EHY +VDLLGR G L+EA ++K MP+EP V + ALL
Sbjct: 551 VEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALL 610
Query: 349 SACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRK 405
++CR+H ++AE + +S LE +G ++LLSN+Y + W + VR + K ++K
Sbjct: 611 NSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKK 670
Query: 406 KRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLI 442
G SWIE+ ++F++ +E + I+ VLE L+
Sbjct: 671 VSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLV 707
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 128/284 (45%), Gaps = 32/284 (11%)
Query: 22 FGSLSESWSITQRSSHSLT---DHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYP- 77
+ S+S +++ S +SLT D S+FH + + + HA++++ +
Sbjct: 30 YTSISSPDTVSVSSYYSLTSNNDQSLFHYFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSG 89
Query: 78 SLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDV 137
SL A LIS YAR A +VF V +LV+ S D+
Sbjct: 90 SLAANLISVYARLGLLLDARNVFETV------SLVLLS--------------------DL 123
Query: 138 VTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGL 197
WN+++ V + + + L L+RGM + DG+ ++ C LG + H
Sbjct: 124 RLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQ 183
Query: 198 MLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF-DTVARDHVSVWNAMINGLAVHGLALD 256
+++ +K N + L+ +Y K GR+ + +F + R+ +S WN MI G +
Sbjct: 184 VIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMS-WNVMIKGFSQEYDCES 242
Query: 257 AIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 300
A+ +F M+ E PD +T+ +L S CG + ++F++M+
Sbjct: 243 AVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMR 286
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 154/361 (42%), Gaps = 60/361 (16%)
Query: 65 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAGEC 122
H ++I G +V L++ Y + + A+++F V + S N++I+ + +C
Sbjct: 181 HTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDC 240
Query: 123 DIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 178
+ A K+F+ M D VTW +++ + + +F D L+ F M + G A
Sbjct: 241 ESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVF 300
Query: 179 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 238
+ CA L AL A+ VHG +++ + AL+ +Y K G++ ++ +F + +
Sbjct: 301 FSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGI 360
Query: 239 SVWNAMIN---------------------------------------GLAVHGLALDAIA 259
WN++I G V G D++
Sbjct: 361 ESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLE 420
Query: 260 VFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNI----MQNRFLIQPQLEHYGT 314
F +M+ VL +S+T IL C+ +N GRE H ++ M L+Q
Sbjct: 421 YFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQ------NA 474
Query: 315 MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGD 374
+V++ + G L E + +A+ + D++ W +++ +HG AE A++ R+ S
Sbjct: 475 LVNMYAKCGLLSEGSLVFEAIR-DKDLISWNSIIKGYGMHG---FAEKALSMFDRMISSG 530
Query: 375 F 375
F
Sbjct: 531 F 531
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 209 LSAALVDMYAKCGRIDVSKQVFDTVARDHVS---VWNAMINGLAVHGLALDAIAVFSRME 265
L+A L+ +YA+ G + ++ VF+TV+ +S +WN+++ HGL +A+ ++ M
Sbjct: 91 LAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMR 150
Query: 266 VENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGN 324
+ D IL+AC + G R H ++Q ++ L ++ L +AG
Sbjct: 151 QRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQ--IGLKENLHVVNELLTLYPKAGR 208
Query: 325 LEEACNMIKAMPV 337
+ +A N+ MPV
Sbjct: 209 MGDAYNLFVEMPV 221
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/429 (31%), Positives = 216/429 (50%), Gaps = 33/429 (7%)
Query: 11 KLQRLIHGAIKFGSLSESWSITQRSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIV 70
KL + + G G L E+ + SS + + +LQ + + T + HA++ V
Sbjct: 78 KLDKTLKGLCVTGRLKEAVGLLW-SSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFV 136
Query: 71 HGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFD 130
G+A L L+ YA +G+ A +F
Sbjct: 137 VGFALNEYLKVKLLILYAL-----------------------------SGDLQTAGILFR 167
Query: 131 KMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCN 190
+ +RD++ WN +I GYV+ +GL ++ M + PD +TFASV C+ L L +
Sbjct: 168 SLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEH 227
Query: 191 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAV 250
K H +M+++ +K N I+ +ALVDMY KC +VFD ++ +V W ++I+G
Sbjct: 228 GKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGY 287
Query: 251 HGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLE 310
HG + + F +M+ E P+ +TF+ +L AC+H GLV++G EHF M+ + I+P+ +
Sbjct: 288 HGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQ 347
Query: 311 HYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRL 370
HY MVD LGRAG L+EA + P + +W +LL ACRIHG +L E A L
Sbjct: 348 HYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLEL 407
Query: 371 ES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQS 427
+ G++V+ +N Y S A +VR M+ GV+K G S IEL +H+F D S
Sbjct: 408 DPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTS 467
Query: 428 HAEMKAIHR 436
H + I++
Sbjct: 468 HRLSEKIYK 476
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/372 (38%), Positives = 212/372 (56%), Gaps = 9/372 (2%)
Query: 48 VLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVF-SRVMDT 106
+L S S+ S+ + H ++ G+ Y L A +I YA + +A F + V D
Sbjct: 311 LLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDH 370
Query: 107 F-SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 165
S+N +I +K G + AR+VFD+ +D+ +WN +I GY +++ L LFR M+S
Sbjct: 371 IASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMIS 430
Query: 166 A-EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
+ +V+PD T SV + + LG+L K H + + N L+AA++DMYAKCG I+
Sbjct: 431 SSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIE 490
Query: 225 VSKQVF---DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
+ +F ++ +S WNA+I G A HG A A+ ++S ++ + P+SITFVG+L
Sbjct: 491 TALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLS 550
Query: 282 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 341
AC H GLV G+ +F M++ I+P ++HYG MVDLLG+AG LEEA MIK MPV+ DV
Sbjct: 551 ACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADV 610
Query: 342 VIWRALLSACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMM 398
+IW LLSA R HG E+AE A ++ ++ G V+LSN+Y W + VR M
Sbjct: 611 MIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEM 670
Query: 399 KIGGVRKKRGKS 410
+ V R S
Sbjct: 671 RTRDVEWSRAFS 682
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 122/230 (53%), Gaps = 2/230 (0%)
Query: 54 ASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR--VMDTFSKNL 111
+S D T + H +++ G + + ++++ YA+C A VF +D+ S N+
Sbjct: 53 SSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNI 112
Query: 112 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 171
+++ +++ A K+FD MP R V++ TLI GY +N ++ + + LFR M + + +
Sbjct: 113 MVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLN 172
Query: 172 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 231
T A+V++ C+ LG + + + + L ++ +++ +S L+ MY C + ++++FD
Sbjct: 173 EVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFD 232
Query: 232 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
+ ++ WN M+NG + GL A +F ++ ++++ G L+
Sbjct: 233 EMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLR 282
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 124/289 (42%), Gaps = 43/289 (14%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N+++ KAG + A ++FD++ +D+V+W T+I G ++ + + L + ML ++
Sbjct: 243 NVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMK 302
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
P +++ AR +HG ++++ L A ++ YA I ++ Q
Sbjct: 303 PSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQ 362
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL------------------- 270
F+ +DH++ NA+I G +G+ A VF + +++
Sbjct: 363 FEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLAL 422
Query: 271 -------------PDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVD 317
PD+IT V + A S G + EG+ + + N I P ++D
Sbjct: 423 HLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL-NFSTIPPNDNLTAAIID 481
Query: 318 LLGRAGNLEEACNM------IKAMPVEPDVVIWRALLSACRIHGKKELA 360
+ + G++E A N+ I + + P W A++ HG +LA
Sbjct: 482 MYAKCGSIETALNIFHQTKNISSSTISP----WNAIICGSATHGHAKLA 526
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/318 (38%), Positives = 188/318 (59%), Gaps = 4/318 (1%)
Query: 135 RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWV 194
+ +V W ++ G+ +N + + L+ ++ M V PD TF +V+ C+ L +L + +
Sbjct: 695 KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI 754
Query: 195 HGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR-DHVSVWNAMINGLAVHGL 253
H L+ L+ + S L+DMYAKCG + S QVFD + R +V WN++ING A +G
Sbjct: 755 HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814
Query: 254 ALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG 313
A DA+ +F M +++PD ITF+G+L ACSH G V++GR+ F +M ++ I+ +++H
Sbjct: 815 AEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVA 874
Query: 314 TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE-- 371
MVDLLGR G L+EA + I+A ++PD +W +LL ACRIHG E + + LE
Sbjct: 875 CMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQ 934
Query: 372 -SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAE 430
S +VLLSN+Y S W A +R +M+ GV+K G SWI++ H F A D+SH+E
Sbjct: 935 NSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSE 994
Query: 431 MKAIHRVLEGLIQRAKFD 448
+ I LE L K D
Sbjct: 995 IGKIEMFLEDLYDLMKDD 1012
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 143/299 (47%), Gaps = 15/299 (5%)
Query: 72 GYATYPSLVAALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIA 125
GY +L+ST A H + S ++ + F N +++ K G + A
Sbjct: 423 GYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDA 482
Query: 126 RKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARL 185
R++F++M RD VTWNT+IG YV++ + LF+ M + DG AS + C +
Sbjct: 483 RQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHV 542
Query: 186 GALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMI 245
L K VH L ++ + + ++L+DMY+KCG I +++VF ++ V NA+I
Sbjct: 543 HGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALI 602
Query: 246 NGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFL 304
G + + L +A+ +F M V P ITF I++AC + G + H I + F
Sbjct: 603 AGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGF- 660
Query: 305 IQPQLEHYGTMVDLLGRAGN---LEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
+ E+ G + LLG N + EAC + + +V+W ++S +G E A
Sbjct: 661 -SSEGEYLG--ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEA 716
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 140/287 (48%), Gaps = 33/287 (11%)
Query: 65 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDI 124
HA+ I G A+ + ++L+S Y++C + M+A
Sbjct: 350 HAEAIKLGLASNIYVGSSLVSMYSKCEK------------------------MEA----- 380
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
A KVF+ + ++ V WN +I GY N + LF M S+ D FTF S+++ CA
Sbjct: 381 AAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAA 440
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNA 243
L H ++++K++ N + ALVDMYAKCG ++ ++Q+F+ + RD+V+ WN
Sbjct: 441 SHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVT-WNT 499
Query: 244 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 303
+I +A +F RM + ++ D LKAC+H + +G++ + + +
Sbjct: 500 IIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ-VHCLSVKC 558
Query: 304 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
+ L +++D+ + G +++A + ++P E VV AL++
Sbjct: 559 GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP-EWSVVSMNALIAG 604
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 6/214 (2%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N +++ K + A K FD + +DV WN+++ Y + LR F + ++
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIF 157
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
P+ FTF+ V++ CAR + + +H M++ ++ N ALVDMYAKC RI +++V
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 289
F+ + + W + +G GL +A+ VF RM E PD + FV ++ G +
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKL 277
Query: 290 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAG 323
+ R F M + P + + M+ G+ G
Sbjct: 278 KDARLLFGEMSS-----PDVVAWNVMISGHGKRG 306
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 8/274 (2%)
Query: 83 LISTYARCHQPHIAHHVFSRVMDTFSKN------LVIESLMKAGECDIARKVFDKMPVRD 136
L S Y + P A VF R+ D + VI + ++ G+ AR +F +M D
Sbjct: 232 LFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPD 291
Query: 137 VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHG 196
VV WN +I G+ K + F M + V+ T SV++ + L VH
Sbjct: 292 VVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHA 351
Query: 197 LMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALD 256
++ + N + ++LV MY+KC +++ + +VF+ + + WNAMI G A +G +
Sbjct: 352 EAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHK 411
Query: 257 AIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMV 316
+ +F M+ D TF +L C+ + G + +I+ + L + L +V
Sbjct: 412 VMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAK-NLFVGNALV 470
Query: 317 DLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
D+ + G LE+A + + M + D V W ++ +
Sbjct: 471 DMYAKCGALEDARQIFERM-CDRDNVTWNTIIGS 503
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 86/164 (52%), Gaps = 12/164 (7%)
Query: 94 HIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVR-DVVTWNTLIGGYVKNVR 152
H+AH +D + N +I+ K G+ + +VFD+M R +VV+WN+LI GY KN
Sbjct: 760 HLAHD-----LDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814
Query: 153 FLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEK---RVKLNYIL 209
D L++F M + + PD TF V+T C+ G + + + + +M+ + +++++
Sbjct: 815 AEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHV- 873
Query: 210 SAALVDMYAKCGRIDVSKQVFDTV-ARDHVSVWNAMINGLAVHG 252
A +VD+ + G + + + + +W++++ +HG
Sbjct: 874 -ACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHG 916
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 89/191 (46%), Gaps = 15/191 (7%)
Query: 209 LSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVEN 268
L A+VD+YAKC ++ +++ FD + +D V+ WN+M++ + G + F +
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFDFLEKD-VTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ 155
Query: 269 VLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEE 327
+ P+ TF +L C+ V GR+ H +++ + ++ G +VD+ + + +
Sbjct: 156 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMI--KMGLERNSYCGGALVDMYAKCDRISD 213
Query: 328 ACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGD-------FVLLSN 380
A + + + V+P+ V W L S + K L E A+ R+ FV + N
Sbjct: 214 ARRVFEWI-VDPNTVCWTCLFSG---YVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVIN 269
Query: 381 MYCSLKNWHNA 391
Y L +A
Sbjct: 270 TYIRLGKLKDA 280
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 198/349 (56%), Gaps = 3/349 (0%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
+D + + +++ +K G+ A+ FD +PV D V W T+I G ++N +F M
Sbjct: 550 LDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQM 609
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
V PD FT A++ + L AL + +H L+ + + +LVDMYAKCG I
Sbjct: 610 RLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSI 669
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
D + +F + +++ WNAM+ GLA HG + + +F +M+ + PD +TF+G+L AC
Sbjct: 670 DDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSAC 729
Query: 284 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 343
SH GLV+E +H M + I+P++EHY + D LGRAG +++A N+I++M +E +
Sbjct: 730 SHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASM 789
Query: 344 WRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKI 400
+R LL+ACR+ G E + + LE D +VLLSNMY + W + R MMK
Sbjct: 790 YRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKG 849
Query: 401 GGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
V+K G SWIE+ + IH F D+S+ + + I+R ++ +I+ K +G
Sbjct: 850 HKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEG 898
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 17/272 (6%)
Query: 92 QPHIAHHVFSRVMDTFSKNLVIESL-----MKAGECDIARKVFDKMPVRDVVTWNTLIGG 146
Q H+ + V D+F +I++ MK E R FD +V WN ++ G
Sbjct: 438 QVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFD------LVAWNAMMAG 491
Query: 147 YVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLN 206
Y ++ L+LF M D FT A+V C L A+ K VH ++ L+
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 551
Query: 207 YILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEV 266
+S+ ++DMY KCG + ++ FD++ W MI+G +G A VFS+M +
Sbjct: 552 LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL 611
Query: 267 ENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGT-MVDLLGRAGN 324
VLPD T + KA S + +GR+ H N ++ P GT +VD+ + G+
Sbjct: 612 MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDP---FVGTSLVDMYAKCGS 668
Query: 325 LEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
+++A + K + + ++ W A+L HG+
Sbjct: 669 IDDAYCLFKRIEM-MNITAWNAMLVGLAQHGE 699
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 132/293 (45%), Gaps = 47/293 (16%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N +I K + AR VFD M RD+++WN++I G +N ++ + LF +L ++
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRV-----KLNYI----LSAALVDMYA-- 218
PD +T SV+ + L GL L K+V K+N + +S AL+D Y+
Sbjct: 414 PDQYTMTSVLKAASSLP--------EGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRN 465
Query: 219 ---KCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSIT 275
K I + FD VA WNAM+ G + +F+ M + D T
Sbjct: 466 RCMKEAEILFERHNFDLVA------WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFT 519
Query: 276 FVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKA 334
+ K C +N+G++ H +++ + + L ++D+ + G++ A +
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKSGYDL--DLWVSSGILDMYVKCGDMSAAQFAFDS 577
Query: 335 MPVEPDVVIWRALLSACRIHGKKELA---------------EFAIANISRLES 372
+PV PD V W ++S C +G++E A EF IA +++ S
Sbjct: 578 IPV-PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASS 629
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 124/257 (48%), Gaps = 18/257 (7%)
Query: 130 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 189
D V +++ N + Y+ + ++ L+ F M+ ++VE D TF ++ ++ +L
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 190 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLA 249
+ VH + L+ + L +S +L++MY K + ++ VFD ++ + WN++I G+A
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 250 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC--GLVNEGREH-----FNIMQNR 302
+GL ++A+ +F ++ + PD T +LKA S GL + H N + +
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS 452
Query: 303 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA-CRIH-GKKELA 360
F+ ++D R ++EA + + D+V W A+++ + H G K L
Sbjct: 453 FVST-------ALIDAYSRNRCMKEAEILFERHNF--DLVAWNAMMAGYTQSHDGHKTLK 503
Query: 361 EFAIANISRLESGDFVL 377
FA+ + S DF L
Sbjct: 504 LFALMHKQGERSDDFTL 520
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 9/185 (4%)
Query: 99 VFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGY-------VKNV 151
F + F N +I K G AR+VFDKMP RD+V+WN+++ Y V+N+
Sbjct: 67 TFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENI 126
Query: 152 RFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSA 211
+ LFR + V T + ++ C G + ++ HG + + + ++
Sbjct: 127 Q--QAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAG 184
Query: 212 ALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLP 271
ALV++Y K G++ K +F+ + V +WN M+ G +AI + S + P
Sbjct: 185 ALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNP 244
Query: 272 DSITF 276
+ IT
Sbjct: 245 NEITL 249
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 213 LVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNAMINGLAVHGLAL-----DAIAVFSRMEV 266
L+ MY+KCG + +++VFD + RD VS WN+++ A + A +F +
Sbjct: 80 LISMYSKCGSLTYARRVFDKMPDRDLVS-WNSILAAYAQSSECVVENIQQAFLLFRILRQ 138
Query: 267 ENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLE 326
+ V +T +LK C H G V E F+ + + G +V++ + G ++
Sbjct: 139 DVVYTSRMTLSPMLKLCLHSGYV-WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVK 197
Query: 327 EACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
E + + MP DVV+W +L A G KE A
Sbjct: 198 EGKVLFEEMPYR-DVVLWNLMLKAYLEMGFKEEA 230
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/307 (40%), Positives = 186/307 (60%), Gaps = 3/307 (0%)
Query: 112 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 171
+I+ +K D ARK+F+ R+VV W TLI G+ K R ++ LFR ML + P+
Sbjct: 252 IIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPN 311
Query: 172 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 231
T A+++ C+ LG+L + K VHG M+ ++++ + + +DMYA+CG I +++ VFD
Sbjct: 312 QCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFD 371
Query: 232 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 291
+ +V W++MIN ++GL +A+ F +M+ +NV+P+S+TFV +L ACSH G V E
Sbjct: 372 MMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKE 431
Query: 292 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 351
G + F M + + P+ EHY MVDLLGRAG + EA + I MPV+P W ALLSAC
Sbjct: 432 GWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSAC 491
Query: 352 RIHGKKELA-EFA--IANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRG 408
RIH + +LA E A + ++ +S +VLLSN+Y W VR M I G RK G
Sbjct: 492 RIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVG 551
Query: 409 KSWIELG 415
+S E+G
Sbjct: 552 QSATEVG 558
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 152/283 (53%), Gaps = 8/283 (2%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D + ++E + G + A+KVFD++PVR+ V W L+ GY+K + + RLF M
Sbjct: 143 DDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMR 202
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKR-VKLNYILSAALVDMYAKCGRI 223
+ D T +V C + A K VHG+ + + + + L A+++DMY KC +
Sbjct: 203 DTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLL 262
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
D ++++F+T +V +W +I+G A A++A +F +M E++LP+ T IL +C
Sbjct: 263 DNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSC 322
Query: 284 SHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 342
S G + G+ H +++N I+ ++ + +D+ R GN++ A + MP E +V+
Sbjct: 323 SSLGSLRHGKSVHGYMIRNG--IEMDAVNFTSFIDMYARCGNIQMARTVFDMMP-ERNVI 379
Query: 343 IWRALLSACRIHGKKELAEFAIANISRLESGDFVLLSNMYCSL 385
W ++++A I+G L E A+ +++S + V S + SL
Sbjct: 380 SWSSMINAFGING---LFEEALDCFHKMKSQNVVPNSVTFVSL 419
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 138/313 (44%), Gaps = 41/313 (13%)
Query: 49 LQRSRASMDSTTAAKT-------HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFS 101
+ R+RA + + AKT HAK+I+HG+ L ++L + Y
Sbjct: 4 VNRARALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAY-------------- 49
Query: 102 RVMDTFSKNLVIESLMKAGECDIARKVFDKMPV--RDVVTWNTLIGGYVKNVR--FLDGL 157
+++ D A F+++P R+ +WNT++ GY K+ + D L
Sbjct: 50 ---------------IQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVL 94
Query: 158 RLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMY 217
L+ M D F + C LG L N +HGL ++ + + ++ +LV+MY
Sbjct: 95 LLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMY 154
Query: 218 AKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFV 277
A+ G ++ +++VFD + + +W ++ G + + +F M + D++T +
Sbjct: 155 AQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLI 214
Query: 278 GILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV 337
++KAC + G+ + R I +++D+ + L+ A + + V
Sbjct: 215 CLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFET-SV 273
Query: 338 EPDVVIWRALLSA 350
+ +VV+W L+S
Sbjct: 274 DRNVVMWTTLISG 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
MD + I+ + G +AR VFD MP R+V++W+++I + N F + L F M
Sbjct: 345 MDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKM 404
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNA-KWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
S V P+ TF S+++ C+ G + K + + V A +VD+ + G
Sbjct: 405 KSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGE 464
Query: 223 IDVSKQVFDTVA-RDHVSVWNAMINGLAVH 251
I +K D + + S W A+++ +H
Sbjct: 465 IGEAKSFIDNMPVKPMASAWGALLSACRIH 494
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 199/350 (56%), Gaps = 7/350 (2%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
+DT+ + ++ K G+ + AR+VFD+MP + +V WN+L+ G+ +N + +++F M
Sbjct: 140 LDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQM 199
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
+ EPD TF S+++ CA+ GA+ WVH ++ + + LN L AL+++Y++CG +
Sbjct: 200 RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDV 259
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKA 282
+++VFD + +V+ W AMI+ HG A+ +F++ME + +P+++TFV +L A
Sbjct: 260 GKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSA 319
Query: 283 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 342
C+H GLV EGR + M + + P +EH+ MVD+LGRAG L+EA I +
Sbjct: 320 CAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKAT 379
Query: 343 ---IWRALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRN 396
+W A+L AC++H +L + LE G V+LSN+Y +R+
Sbjct: 380 APALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRD 439
Query: 397 MMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 446
M +RK+ G S IE+ + + F+ D+SH E I+R LE LI R K
Sbjct: 440 GMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCK 489
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 143/300 (47%), Gaps = 35/300 (11%)
Query: 63 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 122
+ HA LIV GY SL+ LI+ C IA+
Sbjct: 27 QVHAHLIVTGYGRSRSLLTKLITL--ACSARAIAY------------------------- 59
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
+F +P+ D +N++I K L + +R MLS+ V P +TF SV+ C
Sbjct: 60 --THLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSC 117
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 242
A L AL K VH + L+ + AALV Y+KCG ++ ++QVFD + + WN
Sbjct: 118 ADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWN 177
Query: 243 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR-EHFNIMQN 301
++++G +GLA +AI VF +M PDS TFV +L AC+ G V+ G H I+
Sbjct: 178 SLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE 237
Query: 302 RFLIQPQLEHYGT-MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
+ +L GT +++L R G++ +A + M E +V W A++SA HG + A
Sbjct: 238 GLDLNVKL---GTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTHGYGQQA 293
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 182/296 (61%), Gaps = 7/296 (2%)
Query: 108 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 167
S N +I AG A++VFD MPVRDVV+WN ++ Y + + L +F ML
Sbjct: 239 SWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDS 298
Query: 168 VE-PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
E PDGFT SV++ CA LG+L +WVH + + +++ L+ ALVDMY+KCG+ID +
Sbjct: 299 TEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKA 358
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 286
+VF ++ VS WN++I+ L+VHGL DA+ +FS M E P+ ITF+G+L AC+H
Sbjct: 359 LEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHV 418
Query: 287 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 346
G++++ R+ F +M + + ++P +EHYG MVDLLGR G +EEA ++ +P + ++ +
Sbjct: 419 GMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLES 478
Query: 347 LLSACRIHGKKELAEFAIAN----ISRLESGDFVLLSNMYCSLKNWHNA-ERVRNM 397
LL AC+ G+ E AE IAN ++ +S + +SN+Y S W + RNM
Sbjct: 479 LLGACKRFGQLEQAE-RIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNM 533
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 120/254 (47%), Gaps = 42/254 (16%)
Query: 103 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
V D F +N ++ ++G +IARKV D+MPVRD V+WN+L+ Y++ + LF
Sbjct: 172 VTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDE 231
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
M VE W N+++S YA G
Sbjct: 232 MEERNVE----------------------SW------------NFMISG-----YAAAGL 252
Query: 223 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENV-LPDSITFVGILK 281
+ +K+VFD++ V WNAM+ A G + + VF++M ++ PD T V +L
Sbjct: 253 VKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLS 312
Query: 282 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 341
AC+ G +++G E ++ ++ I+ + +VD+ + G +++A + +A + DV
Sbjct: 313 ACASLGSLSQG-EWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATS-KRDV 370
Query: 342 VIWRALLSACRIHG 355
W +++S +HG
Sbjct: 371 STWNSIISDLSVHG 384
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 18/255 (7%)
Query: 105 DTFSKNLVIESLMKAGE---CDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR 161
DTFS + ++ E A + +++ + T N++I Y + L +FR
Sbjct: 70 DTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFR 129
Query: 162 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 221
ML V PD ++F V+ CA + +HGL ++ + + + LV++Y + G
Sbjct: 130 EMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSG 189
Query: 222 RIDVSKQVFDTVA-RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL 280
+++++V D + RD VS WN++++ GL +A A+F ME NV +S F ++
Sbjct: 190 YFEIARKVLDRMPVRDAVS-WNSLLSAYLEKGLVDEARALFDEMEERNV--ESWNF--MI 244
Query: 281 KACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM----P 336
+ GLV E +E F+ M R ++ + MV G E + M
Sbjct: 245 SGYAAAGLVKEAKEVFDSMPVRDVVS-----WNAMVTAYAHVGCYNEVLEVFNKMLDDST 299
Query: 337 VEPDVVIWRALLSAC 351
+PD ++LSAC
Sbjct: 300 EKPDGFTLVSVLSAC 314
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 194/341 (56%), Gaps = 4/341 (1%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N I K+ + AR +FD M R V+W +I GY + + L LF M+ + +
Sbjct: 295 NTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEK 354
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLM-LEKRVKLNYILSAALVDMYAKCGRIDVSKQ 228
PD T S+++GC + G+L KW+ + + N ++ AL+DMY+KCG I ++
Sbjct: 355 PDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARD 414
Query: 229 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 288
+FD V W MI G A++G+ L+A+ +FS+M + P+ ITF+ +L+AC+H G
Sbjct: 415 IFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGS 474
Query: 289 VNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 348
+ +G E+F+IM+ + I P L+HY MVDLLGR G LEEA +I+ M +PD IW ALL
Sbjct: 475 LEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALL 534
Query: 349 SACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRK 405
+AC+IH ++AE A ++ LE + +V ++N+Y + W R+R++MK ++K
Sbjct: 535 NACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKK 594
Query: 406 KRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 446
G+S I++ H F + H E + I+ L GL AK
Sbjct: 595 YPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLSLFAK 635
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 143/335 (42%), Gaps = 50/335 (14%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D F ++ +K D A KVF++MP RD TWN ++ G+ ++ LFR M
Sbjct: 86 DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR 145
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
E+ PD T +++ + +L + +H + + V + ++ + Y KCG +D
Sbjct: 146 LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLD 205
Query: 225 VSKQVFDTVARDHVSV--WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
+K VF+ + R +V WN+M +V G A DA ++ M E PD TF+ + +
Sbjct: 206 SAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAAS 265
Query: 283 CSHCGLVNEGR---EH--------------------------------FNIMQNRFLIQP 307
C + + +GR H F+IM +R +
Sbjct: 266 CQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVS- 324
Query: 308 QLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSACRIHGKKELAEF-- 362
+ M+ G+++EA + AM +PD+V +L+S C G E ++
Sbjct: 325 ----WTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWID 380
Query: 363 AIANISRLESGDFVL---LSNMYCSLKNWHNAERV 394
A A+I + + ++ L +MY + H A +
Sbjct: 381 ARADIYGCKRDNVMICNALIDMYSKCGSIHEARDI 415
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 112/234 (47%), Gaps = 2/234 (0%)
Query: 124 IARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCA 183
I R+++ + V WN I V ++ L LFR M EP+ FTF V CA
Sbjct: 4 IHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACA 63
Query: 184 RLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNA 243
RL + + VH +++ + + A VDM+ KC +D + +VF+ + + WNA
Sbjct: 64 RLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNA 123
Query: 244 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 303
M++G G A ++F M + + PDS+T + ++++ S + + E + + R
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSL-KLLEAMHAVGIRL 182
Query: 304 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV-EPDVVIWRALLSACRIHGK 356
+ Q+ T + G+ G+L+ A + +A+ + VV W ++ A + G+
Sbjct: 183 GVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGE 236
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 33/173 (19%)
Query: 82 ALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWN 141
ALI Y++C H AR +FD P + VVTW
Sbjct: 398 ALIDMYSKCGSIH-----------------------------EARDIFDNTPEKTVVTWT 428
Query: 142 TLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEK 201
T+I GY N FL+ L+LF M+ + +P+ TF +V+ CA G+L W + ++++
Sbjct: 429 TMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSL-EKGWEYFHIMKQ 487
Query: 202 RVKLNYILS--AALVDMYAKCGRIDVSKQVF-DTVARDHVSVWNAMINGLAVH 251
++ L + +VD+ + G+++ + ++ + A+ +W A++N +H
Sbjct: 488 VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIH 540
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 234 bits (597), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 137/406 (33%), Positives = 202/406 (49%), Gaps = 34/406 (8%)
Query: 48 VLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTF 107
VLQ A+ D KTH I G T + AL+ Y +C P A+ VFSR+
Sbjct: 270 VLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRI---- 325
Query: 108 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML-SA 166
P +DVV+W LI G+ N + F ML
Sbjct: 326 -------------------------PRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN 360
Query: 167 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
PD V+ C+ LG L AK H +++ N + A+LV++Y++CG + +
Sbjct: 361 NTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA 420
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM-EVENVLPDSITFVGILKACSH 285
+VF+ +A VW ++I G +HG A+ F+ M + V P+ +TF+ IL ACSH
Sbjct: 421 SKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSH 480
Query: 286 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
GL++EG F +M N + + P LEHY +VDLLGR G+L+ A + K MP P I
Sbjct: 481 AGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILG 540
Query: 346 ALLSACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGG 402
LL ACRIH E+AE + LES G ++L+SN+Y W N E++RN +K G
Sbjct: 541 TLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRG 600
Query: 403 VRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFD 448
++K +S IE+ +H+F A D+ H E + ++ +L+ L K D
Sbjct: 601 IKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKED 646
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 123/234 (52%), Gaps = 5/234 (2%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
A +F + +DV++W+T+I YV+N + L +F M+ EP+ T V+ CA
Sbjct: 217 AVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAA 276
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 244
L + H L + K ++ +S ALVDMY KC + + VF + R V W A+
Sbjct: 277 AHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVAL 336
Query: 245 INGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKACSHCGLVNEGR-EHFNIMQNR 302
I+G ++G+A +I FS M +E N PD+I V +L +CS G + + + H +++
Sbjct: 337 ISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYG 396
Query: 303 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
F P + ++V+L R G+L A + + ++ D V+W +L++ IHGK
Sbjct: 397 FDSNPFIG--ASLVELYSRCGSLGNASKVFNGIALK-DTVVWTSLITGYGIHGK 447
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 140/277 (50%), Gaps = 5/277 (1%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM- 163
D + + +I +K G A ++FD++ D+VTW++++ G+ KN + FR M
Sbjct: 95 DLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMV 154
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
++++V PD T ++V+ C +L + VHG ++ + + L +L++ YAK
Sbjct: 155 MASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAF 214
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
+ +F +A V W+ +I +G A +A+ VF+ M + P+ T + +L+AC
Sbjct: 215 KEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQAC 274
Query: 284 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 343
+ + +GR+ + + L + +++ +VD+ + + EEA + +P DVV
Sbjct: 275 AAAHDLEQGRKTHELAIRKGL-ETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVS 332
Query: 344 WRALLSACRIHG--KKELAEFAIANISRLESGDFVLL 378
W AL+S ++G + + EF+I + D +L+
Sbjct: 333 WVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILM 369
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 119/234 (50%), Gaps = 9/234 (3%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
AR++F +M R + WNTL+ + ++ + L F M E +PD FT + C
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 185 LGALCNAKWVHGLMLEKRVKL--NYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 242
L + + +HG ++K V L + + ++L+ MY KCGR+ + ++FD + + + W+
Sbjct: 73 LREVNYGEMIHGF-VKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 243 AMINGLAVHGLALDAIAVFSRMEV-ENVLPDSITFVGILKACSHCGLVNEGR-EHFNIMQ 300
+M++G +G A+ F RM + +V PD +T + ++ AC+ GR H +++
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 301 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIH 354
F L ++++ ++ +EA N+ K M E DV+ W ++ AC +
Sbjct: 192 RGF--SNDLSLVNSLLNCYAKSRAFKEAVNLFK-MIAEKDVISWSTVI-ACYVQ 241
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 195/349 (55%), Gaps = 3/349 (0%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
+D + N +I+ K + D A K+F ++ ++ V+WNT+I GY +FR
Sbjct: 381 LDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREA 440
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
L +V TF+S + CA L ++ VHGL ++ +S +L+DMYAKCG I
Sbjct: 441 LRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDI 500
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
++ VF+ + V+ WNA+I+G + HGL A+ + M+ + P+ +TF+G+L C
Sbjct: 501 KFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGC 560
Query: 284 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 343
S+ GL+++G+E F M I+P LEHY MV LLGR+G L++A +I+ +P EP V+I
Sbjct: 561 SNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMI 620
Query: 344 WRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKI 400
WRA+LSA +E A + I ++ D +VL+SNMY K W N +R MK
Sbjct: 621 WRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKE 680
Query: 401 GGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
GV+K+ G SWIE +H F+ H +MK I+ +LE L +A G
Sbjct: 681 MGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAG 729
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 30/256 (11%)
Query: 29 WSITQRSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYA 88
+S R H L H VF L+ + + H+ ++ GY + + AALI+ Y+
Sbjct: 134 YSRLHREGHELNPH-VFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYS 192
Query: 89 RCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYV 148
C G D AR VF+ + +D+V W ++ YV
Sbjct: 193 VC-----------------------------GSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 149 KNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYI 208
+N F D L+L M A P+ +TF + + LGA AK VHG +L+ L+
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 209 LSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVEN 268
+ L+ +Y + G + + +VF+ + ++ V W+ MI +G +A+ +F RM
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF 343
Query: 269 VLPDSITFVGILKACS 284
V+P+ T IL C+
Sbjct: 344 VVPNEFTLSSILNGCA 359
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 122/246 (49%), Gaps = 6/246 (2%)
Query: 112 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 171
+++ + G+ A KVF++MP DVV W+ +I + +N + + LF M A V P+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 172 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 231
FT +S++ GCA + +HGL+++ L+ +S AL+D+YAKC ++D + ++F
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 232 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 291
++ + WN +I G G A ++F V +TF L AC+ ++
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467
Query: 292 GRE--HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 349
G + I N ++ +++D+ + G+++ A ++ M DV W AL+S
Sbjct: 468 GVQVHGLAIKTNN---AKKVAVSNSLIDMYAKCGDIKFAQSVFNEMET-IDVASWNALIS 523
Query: 350 ACRIHG 355
HG
Sbjct: 524 GYSTHG 529
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 122/247 (49%), Gaps = 8/247 (3%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
+D F+ N+++ + +KAG A +FD+MP R+ V++ TL GY D + L+ +
Sbjct: 82 LDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQ----DPIGLYSRL 137
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
E + F S + L W+H +++ N + AAL++ Y+ CG +
Sbjct: 138 HREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSV 197
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
D ++ VF+ + + VW +++ +G D++ + S M + +P++ TF LKA
Sbjct: 198 DSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKAS 257
Query: 284 SHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 342
G + + H I++ +++ P++ ++ L + G++ +A + MP + DVV
Sbjct: 258 IGLGAFDFAKGVHGQILKTCYVLDPRVGV--GLLQLYTQLGDMSDAFKVFNEMP-KNDVV 314
Query: 343 IWRALLS 349
W +++
Sbjct: 315 PWSFMIA 321
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 207/386 (53%), Gaps = 7/386 (1%)
Query: 63 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFS--RVMDTFSKNLVIESLMKAG 120
+ H IV YA + ++L+ YA+C + A VF RV +T S ++ K+G
Sbjct: 126 QVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSG 185
Query: 121 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEP-DGFTFASVV 179
+ A ++F +PV+++ +W LI G+V++ + L+ +F M V+ D +S+V
Sbjct: 186 RKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIV 245
Query: 180 TGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS 239
CA L A + VHGL++ +S AL+DMYAKC + +K +F + V
Sbjct: 246 GACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVV 305
Query: 240 VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIM 299
W ++I G+A HG A A+A++ M V P+ +TFVG++ ACSH G V +GRE F M
Sbjct: 306 SWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSM 365
Query: 300 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKEL 359
+ I+P L+HY ++DLLGR+G L+EA N+I MP PD W ALLSAC+ G+ ++
Sbjct: 366 TKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQM 425
Query: 360 ----AEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELG 415
A+ +++ + ++LLSN+Y S W R + VRK G S +E+
Sbjct: 426 GIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVR 485
Query: 416 DSIHQFNAADQSHAEMKAIHRVLEGL 441
F A + SH + I R+L+ L
Sbjct: 486 KETEVFYAGETSHPLKEDIFRLLKKL 511
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 12/193 (6%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRL---FRGMLSA 166
N ++ K G A +VFD+MP RD + W +++ N L G L S+
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTAL--NQANLSGKTLSVFSSVGSSS 99
Query: 167 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
+ PD F F+++V CA LG++ + + VH + + ++ ++LVDMYAKCG ++ +
Sbjct: 100 GLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSA 159
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 286
K VFD++ + W AM++G A G +A+ +F + V+N+ + G +++
Sbjct: 160 KAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQS---- 215
Query: 287 GLVNEGREHFNIM 299
+G E F++
Sbjct: 216 ---GKGLEAFSVF 225
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 102/196 (52%), Gaps = 9/196 (4%)
Query: 182 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSV 240
CAR L AK +H +++ + L+ LV++Y KCG + QVFD + RDH++
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIA- 71
Query: 241 WNAMINGLAVHGLALDAIAVFSRMEVENVL-PDSITFVGILKACSHCGLVNEGRE-HFNI 298
W +++ L L+ ++VFS + + L PD F ++KAC++ G ++ GR+ H +
Sbjct: 72 WASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHF 131
Query: 299 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 358
+ + + ++ ++VD+ + G L A + ++ V+ + + W A++S G+KE
Sbjct: 132 IVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAKSGRKE 188
Query: 359 --LAEFAIANISRLES 372
L F I + L S
Sbjct: 189 EALELFRILPVKNLYS 204
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/432 (32%), Positives = 218/432 (50%), Gaps = 33/432 (7%)
Query: 15 LIHGAIKFGSLSESWSI--TQRSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHG 72
+I G G E+ S+ RSS + D +L M + + H+ +I G
Sbjct: 342 IIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWG 401
Query: 73 YATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKM 132
+ ++ +L++ Y C + ++F + F N
Sbjct: 402 FLADLTVCNSLLTMYTFCSDLYCCFNLF----EDFRNN---------------------- 435
Query: 133 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 192
D V+WNT++ +++ + ++ LRLF+ ML +E EPD T +++ GC + +L
Sbjct: 436 --ADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGS 493
Query: 193 WVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHG 252
VH L+ + + L+DMYAKCG + ++++FD++ V W+ +I G A G
Sbjct: 494 QVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSG 553
Query: 253 LALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHY 312
+A+ +F M+ + P+ +TFVG+L ACSH GLV EG + + MQ I P EH
Sbjct: 554 FGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHC 613
Query: 313 GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE- 371
+VDLL RAG L EA I M +EPDVV+W+ LLSAC+ G LA+ A NI +++
Sbjct: 614 SCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDP 673
Query: 372 --SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHA 429
S VLL +M+ S NW NA +R+ MK V+K G+SWIE+ D IH F A D H
Sbjct: 674 FNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHP 733
Query: 430 EMKAIHRVLEGL 441
E I+ VL +
Sbjct: 734 ERDDIYTVLHNI 745
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 145/278 (52%), Gaps = 7/278 (2%)
Query: 108 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 167
++N +I ++ + A +VF +P++D+++W+++I G+ + + L + MLS
Sbjct: 205 AQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFG 264
Query: 168 V-EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
V P+ + F S + C+ L +HGL ++ + N I +L DMYA+CG ++ +
Sbjct: 265 VFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSA 324
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 286
++VFD + R + WN +I GLA +G A +A++VFS+M +PD+I+ +L A +
Sbjct: 325 RRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKP 384
Query: 287 GLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
+++G + H I++ FL L +++ + +L N+ + D V W
Sbjct: 385 MALSQGMQIHSYIIKWGFL--ADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWN 442
Query: 346 ALLSACRIHGK--KELAEFAIANISRLESGDFVLLSNM 381
+L+AC H + + L F + +S E D + + N+
Sbjct: 443 TILTACLQHEQPVEMLRLFKLMLVSECEP-DHITMGNL 479
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 143/309 (46%), Gaps = 16/309 (5%)
Query: 75 TYPSLVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAGECDIARKVFDKM 132
TY SL+ A S+ + I H+ + DT N ++ K G AR+VFD M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 133 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 192
P R++V++ ++I GY +N + + +RL+ ML ++ PD F F S++ CA + K
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 193 WVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHG 252
+H +++ + I AL+ MY + ++ + +VF + + W+++I G + G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 253 LALDAIAVFSRMEVENVL-PDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEH 311
+A++ M V P+ F LKACS L+ R + + I+ +L
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS--SLL---RPDYGSQIHGLCIKSELAG 303
Query: 312 YG----TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANI 367
++ D+ R G L A + + PD W +++ +G A+ A++
Sbjct: 304 NAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAGLANNG---YADEAVSVF 359
Query: 368 SRLESGDFV 376
S++ S F+
Sbjct: 360 SQMRSSGFI 368
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/333 (35%), Positives = 198/333 (59%), Gaps = 4/333 (1%)
Query: 119 AGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 178
G + A +F+ + +D+++WN++I G+ + D ++ F + S+E++ D + F+++
Sbjct: 355 TGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSAL 414
Query: 179 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 238
+ C+ L L + +H L + N + ++L+ MY+KCG I+ +++ F ++ H
Sbjct: 415 LRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHS 474
Query: 239 SV-WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 297
+V WNAMI G A HGL ++ +FS+M +NV D +TF IL ACSH GL+ EG E N
Sbjct: 475 TVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLN 534
Query: 298 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 357
+M+ + IQP++EHY VDLLGRAG + +A +I++MP+ PD ++ + L CR G+
Sbjct: 535 LMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEI 594
Query: 358 ELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIEL 414
E+A ++ +E D +V LS+MY LK W V+ MMK GV+K G SWIE+
Sbjct: 595 EMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEI 654
Query: 415 GDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKF 447
+ + FNA D+S+ + I+ +++ L Q ++
Sbjct: 655 RNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQW 687
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 128/260 (49%), Gaps = 4/260 (1%)
Query: 103 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
+ D + N +++S +K G A +FD+MP RD V+WNT+I GY + D LF
Sbjct: 32 ISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTC 91
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
M + + DG++F+ ++ G A + + VHGL+++ + N + ++LVDMYAKC R
Sbjct: 92 MKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCER 151
Query: 223 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILK 281
++ + + F ++ + WNA+I G A + ME++ V D+ TF +L
Sbjct: 152 VEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLT 211
Query: 282 ACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 340
N ++ H ++ + +Q ++ M+ G++ +A + + D
Sbjct: 212 LLDDPMFCNLLKQVHAKVL--KLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKD 269
Query: 341 VVIWRALLSACRIHGKKELA 360
++ W ++++ H KE A
Sbjct: 270 LISWNSMIAGFSKHELKESA 289
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 166/375 (44%), Gaps = 58/375 (15%)
Query: 15 LIHGAIKFGSLSESWSI--TQRSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHG 72
+I G G L ++W + + S S D F R+L+ + + H +I G
Sbjct: 72 MISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGG 131
Query: 73 YATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKM 132
Y + ++L+ YA+C RV D F + F ++
Sbjct: 132 YECNVYVGSSLVDMYAKCE----------RVEDAF-------------------EAFKEI 162
Query: 133 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS--AEVEPDGFTFASVVTGCARLGALCN 190
+ V+WN LI G+V+ VR + G++ A V D TFA ++T CN
Sbjct: 163 SEPNSVSWNALIAGFVQ-VRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLT-LLDDPMFCN 220
Query: 191 A-KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV--ARDHVSVWNAMING 247
K VH +L+ ++ + A++ YA CG + +K+VFD + ++D +S WN+MI G
Sbjct: 221 LLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLIS-WNSMIAG 279
Query: 248 LAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREH--FNIMQNRFLI 305
+ H L A +F +M+ V D T+ G+L ACS G EH F + +I
Sbjct: 280 FSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS-------GEEHQIFGKSLHGMVI 332
Query: 306 QPQLEHYGTMVDLL------GRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKEL 359
+ LE + + L G +E+A ++ +++ D++ W ++++ +K L
Sbjct: 333 KKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLK-SKDLISWNSIITG---FAQKGL 388
Query: 360 AEFAIANISRLESGD 374
+E A+ S L S +
Sbjct: 389 SEDAVKFFSYLRSSE 403
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 136/414 (32%), Positives = 227/414 (54%), Gaps = 20/414 (4%)
Query: 15 LIHGAIKFGSLSESWSITQRSSHS--LTDHSVFHRVLQRSRASMDSTTAAKT-----HAK 67
+I G +K G + E + QR S+S D VL+ S + + ++ HA+
Sbjct: 106 MISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHAR 165
Query: 68 LIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLV-----IESLMKAGEC 122
+I L+ AL+ TY + + A VF + D +N+V I M G
Sbjct: 166 IIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKD---ENVVCCTSMISGYMNQGFV 222
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLD-GLRLFRGMLSAEVEPDGFTFASVVTG 181
+ A ++F+ V+D+V +N ++ G+ ++ + ++ M A P+ TFASV+
Sbjct: 223 EDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGA 282
Query: 182 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 241
C+ L + + VH +++ V + + ++L+DMYAKCG I+ +++VFD + +V W
Sbjct: 283 CSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSW 342
Query: 242 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 301
+MI+G +G +A+ +F+RM+ + P+ +TF+G L ACSH GLV++G E F MQ
Sbjct: 343 TSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQR 402
Query: 302 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAE 361
+ ++P++EHY +VDL+GRAG+L +A +AMP PD IW ALLS+C +HG ELA
Sbjct: 403 DYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELAS 462
Query: 362 FAIANISRLES----GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSW 411
A + + +L + G ++ LSN+Y S W N ++R +MK + K G+SW
Sbjct: 463 IAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 84/316 (26%)
Query: 117 MKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 176
+K G AR+VFD++P + +N +I GY+K+ + L L + M + + DG+T +
Sbjct: 80 LKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLS 139
Query: 177 SVVTGCARLG-------ALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
V+ G +LC + VH +++ V+L+ +L ALVD Y K G+++ ++ V
Sbjct: 140 MVLKASNSRGSTMILPRSLC--RLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTV 197
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL------------------- 270
F+T+ ++V +MI+G G DA +F+ +V++++
Sbjct: 198 FETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRS 257
Query: 271 -------------PDSITFVGILKACS--------------------------------- 284
P+ TF ++ ACS
Sbjct: 258 VDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDM 317
Query: 285 --HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM---IKAMPVEP 339
CG +N+ R F+ MQ + + + +M+D G+ GN EEA + +K +EP
Sbjct: 318 YAKCGGINDARRVFDQMQEKNVFS-----WTSMIDGYGKNGNPEEALELFTRMKEFRIEP 372
Query: 340 DVVIWRALLSACRIHG 355
+ V + LSAC G
Sbjct: 373 NYVTFLGALSACSHSG 388
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 22/202 (10%)
Query: 191 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAV 250
K +H +++ + + +S L+ ++ KCG + ++QVFD + + +S +N MI+G
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 251 HGLALDAIAVFSRMEVENVLPDSITFVGILKAC-----------SHCGLVNEGREHFNIM 299
HGL + + + RM D T +LKA S C LV+ ++
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 300 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKEL 359
+ LI +VD ++G LE A + + M E +VV +++S G E
Sbjct: 173 LDDVLIT-------ALVDTYVKSGKLESARTVFETMKDE-NVVCCTSMISGYMNQGFVED 224
Query: 360 AEFAIANISRLESGDFVLLSNM 381
AE I N ++++ D V+ + M
Sbjct: 225 AE-EIFNTTKVK--DIVVYNAM 243
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 192/342 (56%), Gaps = 4/342 (1%)
Query: 112 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 171
VI+ K G ++A ++F+++ RD+V+WN++I ++ + +FR M + + D
Sbjct: 482 VIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYD 541
Query: 172 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 231
+ ++ ++ CA L + K +HG M++ + + + L+DMYAKCG + + VF
Sbjct: 542 CVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFK 601
Query: 232 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRM-EVENVLPDSITFVGILKACSHCGLVN 290
T+ ++ WN++I HG D++ +F M E + PD ITF+ I+ +C H G V+
Sbjct: 602 TMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVD 661
Query: 291 EGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
EG F M + IQPQ EHY +VDL GRAG L EA +K+MP PD +W LL A
Sbjct: 662 EGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGA 721
Query: 351 CRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKR 407
CR+H ELAE A + + L+ SG +VL+SN + + + W + +VR++MK V+K
Sbjct: 722 CRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIP 781
Query: 408 GKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
G SWIE+ H F + D +H E I+ +L L+ + +G
Sbjct: 782 GYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEG 823
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 147/288 (51%), Gaps = 12/288 (4%)
Query: 75 TYPSLVAAL--ISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKM 132
T+ SL+ ++ C Q H S +D F + +I++ K +A+ +F +
Sbjct: 342 TFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQC 401
Query: 133 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 192
DVV + +I GY+ N ++D L +FR ++ ++ P+ T S++ L AL +
Sbjct: 402 NSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGR 461
Query: 193 WVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHG 252
+HG +++K + A++DMYAKCGR++++ ++F+ +++ + WN+MI A
Sbjct: 462 ELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSD 521
Query: 253 LALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLE-- 310
AI +F +M V + D ++ L AC+ N E F + F+I+ L
Sbjct: 522 NPSAAIDIFRQMGVSGICYDCVSISAALSACA-----NLPSESFGKAIHGFMIKHSLASD 576
Query: 311 --HYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
T++D+ + GNL+ A N+ K M E ++V W ++++AC HGK
Sbjct: 577 VYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGK 623
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 124/244 (50%), Gaps = 4/244 (1%)
Query: 109 KNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV 168
KN ++ K G D A K+F M D VTWN +I GYV++ + L F M+S+ V
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 169 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 228
PD TF+S++ ++ L K +H ++ + L+ L++AL+D Y KC + +++
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQN 396
Query: 229 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 288
+F V V+ AMI+G +GL +D++ +F + + P+ IT V IL
Sbjct: 397 IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLA 456
Query: 289 VNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 347
+ GRE H I++ F + ++D+ + G + A + + + + D+V W ++
Sbjct: 457 LKLGRELHGFIIKKGF--DNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSM 513
Query: 348 LSAC 351
++ C
Sbjct: 514 ITRC 517
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 138/285 (48%), Gaps = 16/285 (5%)
Query: 74 ATYPSLVAALISTYARCHQPHIAHHVFSRVMDT--FSKNLVIESLMKAGECDIARKVFDK 131
+T+P LV A ++ ++ V S MD F + +I++ ++ G+ D+ K+FD+
Sbjct: 139 STFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDR 198
Query: 132 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA 191
+ +D V WN ++ GY K ++ F M ++ P+ TF V++ CA +
Sbjct: 199 VLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLG 258
Query: 192 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 251
+HGL++ V + +L+ MY+KCGR D + ++F ++R WN MI+G
Sbjct: 259 VQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQS 318
Query: 252 GLALDAIAVFSRMEVENVLPDSITFVGILKACS------HCGLVNEGREHFNIMQNRFLI 305
GL +++ F M VLPD+ITF +L + S +C ++ +I + FL
Sbjct: 319 GLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLT 378
Query: 306 QPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
++ Y + A N+ CN + DVV++ A++S
Sbjct: 379 SALIDAYFKCRG-VSMAQNIFSQCNSV-------DVVVFTAMISG 415
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 136/297 (45%), Gaps = 7/297 (2%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVR--DVVTWNTLIGGYVKNVRFLDGLRLFRG 162
D+++ ++ G K+F ++ +R + WN++I +V+N L +
Sbjct: 69 DSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFK 128
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
ML V PD TF +V C L ++ + + N ++++L+ Y + G+
Sbjct: 129 MLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGK 188
Query: 223 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
IDV ++FD V + +WN M+NG A G I FS M ++ + P+++TF +L
Sbjct: 189 IDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSV 248
Query: 283 CSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 341
C+ L++ G + H ++ + + +++ +++ + + G ++A + + M D
Sbjct: 249 CASKLLIDLGVQLHGLVVVSGVDFEGSIKN--SLLSMYSKCGRFDDASKLFRMMS-RADT 305
Query: 342 VIWRALLSACRIHG-KKELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNM 397
V W ++S G +E F IS D + S++ S+ + N E + +
Sbjct: 306 VTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQI 362
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D +S++ +I+ K G A VF M +++V+WN++I + + D L LF M+
Sbjct: 576 DVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMV 635
Query: 165 S-AEVEPDGFTFASVVTGCARLGALCNA-KWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
+ + PD TF +++ C +G + ++ + + ++ A +VD++ + GR
Sbjct: 636 EKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGR 695
Query: 223 IDVSKQVFDTVAR----DHVSVWNAMINGLAVH 251
+ + ++TV VW ++ +H
Sbjct: 696 L---TEAYETVKSMPFPPDAGVWGTLLGACRLH 725
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 231 bits (590), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 186/341 (54%), Gaps = 3/341 (0%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
+D N +I+ K GE + K+F M D VTWNT+I V+ F GL++ M
Sbjct: 441 IDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQM 500
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
+EV PD TF + CA L A K +H +L + + AL++MY+KCG +
Sbjct: 501 RKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCL 560
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
+ S +VF+ ++R V W MI ++G A+ F+ ME ++PDS+ F+ I+ AC
Sbjct: 561 ENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYAC 620
Query: 284 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 343
SH GLV+EG F M+ + I P +EHY +VDLL R+ + +A I+AMP++PD I
Sbjct: 621 SHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASI 680
Query: 344 WRALLSACRIHGKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMKI 400
W ++L ACR G E AE I L + G +L SN Y +L+ W +R +K
Sbjct: 681 WASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKD 740
Query: 401 GGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGL 441
+ K G SWIE+G ++H F++ D S + +AI++ LE L
Sbjct: 741 KHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEIL 781
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 142/268 (52%), Gaps = 4/268 (1%)
Query: 103 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
V+++ +N++I+ K G+ AR VF+ M +D V+WN++I GY+++ ++ ++LF+
Sbjct: 339 VLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKM 398
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
M+ E + D T+ +++ RL L K +H ++ + ++ +S AL+DMYAKCG
Sbjct: 399 MMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGE 458
Query: 223 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
+ S ++F ++ WN +I+ G + V ++M V+PD TF+ L
Sbjct: 459 VGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPM 518
Query: 283 CSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 341
C+ G+E H ++ RF + +L+ ++++ + G LE + + + M DV
Sbjct: 519 CASLAAKRLGKEIHCCLL--RFGYESELQIGNALIEMYSKCGCLENSSRVFERMS-RRDV 575
Query: 342 VIWRALLSACRIHGKKELAEFAIANISR 369
V W ++ A ++G+ E A A++ +
Sbjct: 576 VTWTGMIYAYGMYGEGEKALETFADMEK 603
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 150/287 (52%), Gaps = 23/287 (8%)
Query: 75 TYPSLVAALISTYARCHQPHIAHHVFSRVMDT------FSKNLVIESLMKAGECDIARKV 128
T+PS++ A + + V+ +++D F N +++ + G AR+V
Sbjct: 108 TFPSVIKACAGLF----DAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQV 163
Query: 129 FDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGAL 188
FD+MPVRD+V+WN+LI GY + + + L ++ + ++ + PD FT +SV+ L +
Sbjct: 164 FDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVV 223
Query: 189 CNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-ARDHVSVWNAMING 247
+ +HG L+ V +++ LV MY K R +++VFD + RD VS +N MI G
Sbjct: 224 KQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVS-YNTMICG 282
Query: 248 LAVHGLALDAIAVFSRMEVENV---LPDSITFVGILKACSHCGLVNEGREHFNIM-QNRF 303
L L+ + RM +EN+ PD +T +L+AC H ++ + +N M + F
Sbjct: 283 Y----LKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGF 338
Query: 304 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
+++ + + ++D+ + G++ A ++ +M + D V W +++S
Sbjct: 339 VLESTVRN--ILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISG 382
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 125/229 (54%), Gaps = 7/229 (3%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
AR+VFD+M VRD V++NT+I GY+K + +R+F L + +PD T +SV+ C
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGH 319
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-ARDHVSVWNA 243
L L AK+++ ML+ L + L+D+YAKCG + ++ VF+++ +D VS WN+
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS-WNS 378
Query: 244 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNR 302
+I+G G ++A+ +F M + D IT++ ++ + + G+ H N +++
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG 438
Query: 303 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 351
I L ++D+ + G + ++ + +M D V W ++SAC
Sbjct: 439 ICI--DLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVISAC 484
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 30/232 (12%)
Query: 63 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 122
+ HA +I G + LI Y+ +P + VF RV
Sbjct: 25 RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS------------------ 66
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
P ++V WN++I + KN F + L + + ++V PD +TF SV+ C
Sbjct: 67 ----------PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC 116
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVW 241
A L V+ +L+ + + + ALVDMY++ G + ++QVFD + RD VS W
Sbjct: 117 AGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVS-W 175
Query: 242 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR 293
N++I+G + HG +A+ ++ ++ ++PDS T +L A + +V +G+
Sbjct: 176 NSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 194 VHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR-DHVSVWNAMINGLAVHG 252
+H L++ + + S L+D Y+ S VF V+ +V +WN++I + +G
Sbjct: 26 IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG 85
Query: 253 LALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL---IQPQL 309
L +A+ + ++ V PD TF ++KAC+ GL + E +++ + L + L
Sbjct: 86 LFPEALEFYGKLRESKVSPDKYTFPSVIKACA--GLFDA--EMGDLVYEQILDMGFESDL 141
Query: 310 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
+VD+ R G L A + MPV D+V W +L+S HG E A
Sbjct: 142 FVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISGYSSHGYYEEA 191
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 231 bits (590), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 195/345 (56%), Gaps = 3/345 (0%)
Query: 103 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
++DT +N +++ K A +VF+ + +DVV+W ++I N + + LFR
Sbjct: 518 LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRR 577
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
M+ + D +++ A L AL + +H +L K L ++ A+VDMYA CG
Sbjct: 578 MVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGD 637
Query: 223 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
+ +K VFD + R + + +MIN +HG A+ +F +M ENV PD I+F+ +L A
Sbjct: 638 LQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYA 697
Query: 283 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 342
CSH GL++EGR IM++ + ++P EHY +VD+LGRA + EA +K M EP
Sbjct: 698 CSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAE 757
Query: 343 IWRALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMK 399
+W ALL+ACR H +KE+ E A + LE G+ VL+SN++ W++ E+VR MK
Sbjct: 758 VWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMK 817
Query: 400 IGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQR 444
G+ K G SWIE+ +H+F A D+SH E K I+ L + ++
Sbjct: 818 ASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRK 862
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 118/238 (49%), Gaps = 14/238 (5%)
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGF-TFA 176
K G D A KVFD+MP R WNT+IG YV N L L+ M E P G +F
Sbjct: 128 KCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNM-RVEGVPLGLSSFP 186
Query: 177 SVVTGCARLGALCNAKWVHGLMLEKRVKLNY----ILSAALVDMYAKCGRIDVSKQVFDT 232
+++ CA+L + + +H L+ VKL Y + ALV MYAK + ++++FD
Sbjct: 187 ALLKACAKLRDIRSGSELHSLL----VKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDG 242
Query: 233 VARDHVSV-WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 291
+V WN++++ + G +L+ + +F M + P+S T V L AC
Sbjct: 243 FQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL 302
Query: 292 GRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 348
G+E H +++++ +L ++ + R G + +A +++ M DVV W +L+
Sbjct: 303 GKEIHASVLKSS-THSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 122/262 (46%), Gaps = 25/262 (9%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N +I + G+ A ++ +M DVVTWN+LI GYV+N+ + + L F M++A +
Sbjct: 324 NALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHK 383
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
D + S++ RL L +H +++ N + L+DMY+KC +
Sbjct: 384 SDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRA 443
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS----- 284
F + + W +I G A + ++A+ +F + + + D + IL+A S
Sbjct: 444 FLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSM 503
Query: 285 ------HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE 338
HC ++ +G ++QN +VD+ G+ N+ A + +++ +
Sbjct: 504 LIVKEIHCHILRKGLLD-TVIQNE------------LVDVYGKCRNMGYATRVFESIKGK 550
Query: 339 PDVVIWRALLSACRIHGKKELA 360
DVV W +++S+ ++G + A
Sbjct: 551 -DVVSWTSMISSSALNGNESEA 571
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 134/313 (42%), Gaps = 39/313 (12%)
Query: 43 SVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR 102
S F +L+ D + ++ H+ L+ GY + +V AL+S YA
Sbjct: 183 SSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYA-------------- 228
Query: 103 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVR-DVVTWNTLIGGYVKNVRFLDGLRLFR 161
K + AR++FD + D V WN+++ Y + + L+ L LFR
Sbjct: 229 ---------------KNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFR 273
Query: 162 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYI-LSAALVDMYAKC 220
M P+ +T S +T C K +H +L+ + + + AL+ MY +C
Sbjct: 274 EMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRC 333
Query: 221 GRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL 280
G++ ++++ + V WN++I G + + +A+ FS M D ++ I+
Sbjct: 334 GKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSII 393
Query: 281 KACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV-- 337
A + G E H ++++ + L+ T++D+ + NL C M +A
Sbjct: 394 AASGRLSNLLAGMELHAYVIKHGW--DSNLQVGNTLIDMYSKC-NL--TCYMGRAFLRMH 448
Query: 338 EPDVVIWRALLSA 350
+ D++ W +++
Sbjct: 449 DKDLISWTTVIAG 461
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 16/190 (8%)
Query: 175 FASVVTGCARLGALCNAKWVHGLMLE--KRVKLNYILSAALVDMYAKCGRIDVSKQVFDT 232
FA V+ C + A+ + +H + + +L++ L+ LV MY KCG +D +++VFD
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 233 VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEG 292
+ WN MI +G A+A++ M VE V +F +LKAC+ + G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 293 REHFNIMQNRFLIQPQLEHYGT------MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 346
E +++ +L ++ T +V + + +L A + + D V+W +
Sbjct: 202 SELHSLLV-------KLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNS 254
Query: 347 LLSACRIHGK 356
+LS+ GK
Sbjct: 255 ILSSYSTSGK 264
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 231 bits (590), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 121/340 (35%), Positives = 200/340 (58%), Gaps = 4/340 (1%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D F + +++ K GE ARK+FD+MP R+VVTW+ ++ GY + + L LF+ L
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
+ + ++F+SV++ CA L + +HGL ++ + + ++LV +Y+KCG +
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 225 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
+ QVF+ V ++ +WNAM+ A H I +F RM++ + P+ ITF+ +L ACS
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 285 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 344
H GLV+EGR +F+ M+ I+P +HY ++VD+LGRAG L+EA +I MP++P +W
Sbjct: 330 HAGLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVW 388
Query: 345 RALLSACRIHGKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMKIG 401
ALL++C +H ELA FA + L SG + LSN Y + + +A + R +++
Sbjct: 389 GALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDR 448
Query: 402 GVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGL 441
G +K+ G SW+E + +H F A ++ H + K I+ L L
Sbjct: 449 GEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAEL 488
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 111/230 (48%), Gaps = 2/230 (0%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
+R+ F+ P + TW+++I + +N L + M++ + PD S CA
Sbjct: 69 SRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAI 128
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 244
L + VH L ++ + + ++LVDMYAKCG I ++++FD + + +V W+ M
Sbjct: 129 LSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGM 188
Query: 245 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 304
+ G A G +A+ +F EN+ + +F ++ C++ L+ GR+ + + +
Sbjct: 189 MYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQ-IHGLSIKSS 247
Query: 305 IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIH 354
++V L + G E A + +PV+ ++ IW A+L A H
Sbjct: 248 FDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQH 296
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 30/170 (17%)
Query: 83 LISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNT 142
L+S Y++C P A+ VF+ V PV+++ WN
Sbjct: 258 LVSLYSKCGVPEGAYQVFNEV-----------------------------PVKNLGIWNA 288
Query: 143 LIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKR 202
++ Y ++ + LF+ M + ++P+ TF +V+ C+ G + ++ M E R
Sbjct: 289 MLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESR 348
Query: 203 VKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV-SVWNAMINGLAVH 251
++ A+LVDM + GR+ + +V + D SVW A++ VH
Sbjct: 349 IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVH 398
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 231 bits (590), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 128/325 (39%), Positives = 183/325 (56%), Gaps = 3/325 (0%)
Query: 107 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 166
F+ +++ KAG ARK FD + RDV W +LI GYV+N + L L+R M +A
Sbjct: 358 FATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTA 417
Query: 167 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
+ P+ T ASV+ C+ L L K VHG ++ L + +AL MY+KCG ++
Sbjct: 418 GIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDG 477
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 286
VF V WNAMI+GL+ +G +A+ +F M E + PD +TFV I+ ACSH
Sbjct: 478 NLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHK 537
Query: 287 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 346
G V G +FN+M ++ + P+++HY MVDLL RAG L+EA I++ ++ + +WR
Sbjct: 538 GFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRI 597
Query: 347 LLSACRIHGKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGV 403
LLSAC+ HGK EL +A + L ES +V LS +Y +L + ERV M+ GV
Sbjct: 598 LLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGV 657
Query: 404 RKKRGKSWIELGDSIHQFNAADQSH 428
K+ G SWIEL + H F D H
Sbjct: 658 SKEVGCSWIELKNQYHVFVVGDTMH 682
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 162/329 (49%), Gaps = 34/329 (10%)
Query: 33 QRSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQ 92
++ S +D+ VF VL A++ + H I +G + +L AL++ Y++C
Sbjct: 213 EKEEGSDSDY-VFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKC-- 269
Query: 93 PHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVR 152
ESL +A C K+FD R+ +TW+ ++ GY +N
Sbjct: 270 ---------------------ESLNEA--C----KMFDSSGDRNSITWSAMVTGYSQNGE 302
Query: 153 FLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAA 212
L+ ++LF M SA ++P +T V+ C+ + L K +H +L+ + + + A
Sbjct: 303 SLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTA 362
Query: 213 LVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPD 272
LVDMYAK G + +++ FD + V++W ++I+G + +A+ ++ RM+ ++P+
Sbjct: 363 LVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPN 422
Query: 273 SITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM 331
T +LKACS + G++ H + +++ F ++ + + + + G+LE+ +
Sbjct: 423 DPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGSLEDGNLV 480
Query: 332 IKAMPVEPDVVIWRALLSACRIHGKKELA 360
+ P DVV W A++S +G+ + A
Sbjct: 481 FRRTP-NKDVVSWNAMISGLSHNGQGDEA 508
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 16/263 (6%)
Query: 98 HVFSRVMDTFSKNLVIESLM----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRF 153
H M +F V SL+ KAG + KVF MP R+ TW+T++ GY R
Sbjct: 141 HALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRV 200
Query: 154 LDGLRLFRGMLSAEVE--PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSA 211
+ +++F L + E + F +V++ A + + +H + ++ + LS
Sbjct: 201 EEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSN 260
Query: 212 ALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLP 271
ALV MY+KC ++ + ++FD+ + W+AM+ G + +G +L+A+ +FSRM + P
Sbjct: 261 ALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKP 320
Query: 272 DSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHY----GTMVDLLGRAGNLEE 327
T VG+L ACS + EG++ + FL++ E + +VD+ +AG L +
Sbjct: 321 SEYTIVGVLNACSDICYLEEGKQ-----LHSFLLKLGFERHLFATTALVDMYAKAGCLAD 375
Query: 328 ACNMIKAMPVEPDVVIWRALLSA 350
A + E DV +W +L+S
Sbjct: 376 ARKGFDCLQ-ERDVALWTSLISG 397
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 120/253 (47%), Gaps = 9/253 (3%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDG---LRLFRGMLSA 166
N+++ K G+ A +F+ + +DVV+WN+LI GY +N ++LFR M +
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 167 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
++ P+ +T A + + L + + H L+++ + + +LV MY K G ++
Sbjct: 113 DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDG 172
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM--EVENVLPDSITFVGILKACS 284
+VF + + W+ M++G A G +AI VF+ E E F +L + +
Sbjct: 173 LKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLA 232
Query: 285 HCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 343
V GR+ H ++N L L + +V + + +L EAC M + + + +
Sbjct: 233 ATIYVGLGRQIHCITIKNGLLGFVALSN--ALVTMYSKCESLNEACKMFDSSG-DRNSIT 289
Query: 344 WRALLSACRIHGK 356
W A+++ +G+
Sbjct: 290 WSAMVTGYSQNGE 302
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 231 bits (589), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 123/336 (36%), Positives = 198/336 (58%), Gaps = 7/336 (2%)
Query: 117 MKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 176
MK GE A +F+ M V+D+V WN + V+ L F M + V+ D FT
Sbjct: 155 MKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVV 214
Query: 177 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 236
S+++ C +LG+L + ++ ++ + N I+ A +DM+ KCG + ++ +F+ + +
Sbjct: 215 SMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQR 274
Query: 237 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 296
+V W+ MI G A++G + +A+ +F+ M+ E + P+ +TF+G+L ACSH GLVNEG+ +F
Sbjct: 275 NVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYF 334
Query: 297 NIM--QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIH 354
++M N ++P+ EHY MVDLLGR+G LEEA IK MPVEPD IW ALL AC +H
Sbjct: 335 SLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
Query: 355 GKKELAEFAIANISRLESGDF----VLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKS 410
L + +A++ + D VLLSN+Y + W ++VR+ M+ G +K S
Sbjct: 395 RDMILGQ-KVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYS 453
Query: 411 WIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 446
+E IH FN D+SH + KAI+ L+ ++++ +
Sbjct: 454 SVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIR 489
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 119/244 (48%), Gaps = 2/244 (0%)
Query: 112 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 171
++E+L+ G+ AR+VFD+M + WNTL GYV+N + L L++ M V PD
Sbjct: 49 LLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPD 108
Query: 172 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 231
FT+ VV ++LG +H +++ I++ LV MY K G + ++ +F+
Sbjct: 109 EFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFE 168
Query: 232 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 291
++ + WNA + G + A+ F++M + V DS T V +L AC G +
Sbjct: 169 SMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEI 228
Query: 292 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 351
G E ++ + I + +D+ + GN E A + + M + +VV W ++
Sbjct: 229 GEEIYDRARKE-EIDCNIIVENARLDMHLKCGNTEAARVLFEEMK-QRNVVSWSTMIVGY 286
Query: 352 RIHG 355
++G
Sbjct: 287 AMNG 290
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 111/248 (44%), Gaps = 12/248 (4%)
Query: 14 RLIHGAIKFGSLSESWSITQRSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGY 73
L+ +KFG LS + + + S + D ++ L + +S A + K+
Sbjct: 149 ELVMMYMKFGELSSAEFLFE--SMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAV 206
Query: 74 ATYPSLVAALISTYARCHQPHIAHHVFSRV-MDTFSKNLVIESL-----MKAGECDIARK 127
V +++S + I ++ R + N+++E+ +K G + AR
Sbjct: 207 QFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARV 266
Query: 128 VFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGA 187
+F++M R+VV+W+T+I GY N + L LF M + + P+ TF V++ C+ G
Sbjct: 267 LFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGL 326
Query: 188 LCNAKWVHGLMLE---KRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNA 243
+ K LM++ K ++ A +VD+ + G ++ + + + +W A
Sbjct: 327 VNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGA 386
Query: 244 MINGLAVH 251
++ AVH
Sbjct: 387 LLGACAVH 394
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 20/178 (11%)
Query: 192 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 251
K +H ++L L L++ G + ++QVFD + + + +WN + G +
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 252 GLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEH 311
L +++ ++ +M V PD T+ ++KA S G + G F + +
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCG----------FALHAHVVK 137
Query: 312 YG---------TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
YG +V + + G L A + ++M V+ D+V W A L+ C G +A
Sbjct: 138 YGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVK-DLVAWNAFLAVCVQTGNSAIA 194
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 231 bits (588), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 133/375 (35%), Positives = 206/375 (54%), Gaps = 17/375 (4%)
Query: 44 VFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV 103
VF ++L +M + A LI+ G A + L RC + F +
Sbjct: 293 VFFQMLVNDNVAMVTPVAIG----LILMGCARFGDLSGG------RCVHCYAVKAGF--I 340
Query: 104 MDTFSKNLVIESLMKAGE-CDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
+D +N +I K G CD R+ F ++ ++DV+++N+LI G V N R + RLF
Sbjct: 341 LDLTVQNTIISFYAKYGSLCDAFRQ-FSEIGLKDVISYNSLITGCVVNCRPEESFRLFHE 399
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
M ++ + PD T V+T C+ L AL + HG + +N + AL+DMY KCG+
Sbjct: 400 MRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGK 459
Query: 223 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
+DV+K+VFDT+ + + WN M+ G +HGL +A+++F+ M+ V PD +T + IL A
Sbjct: 460 LDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSA 519
Query: 283 CSHCGLVNEGREHFNIM-QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 341
CSH GLV+EG++ FN M + F + P+++HY M DLL RAG L+EA + + MP EPD+
Sbjct: 520 CSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDI 579
Query: 342 VIWRALLSACRIHGKKELAEFAIANISRL--ESGDFVLLSNMYCSLKNWHNAERVRNMMK 399
+ LLSAC + EL + L + VLLSN Y + + W +A R+R + K
Sbjct: 580 RVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESLVLLSNTYSAAERWEDAARIRMIQK 639
Query: 400 IGGVRKKRGKSWIEL 414
G+ K G SW+++
Sbjct: 640 KRGLLKTPGYSWVDV 654
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 8/206 (3%)
Query: 95 IAHHVFSRVMDTFSKNLVIESLMK----AGECDIARKVFDKMPVRDV--VTWNTLIGGYV 148
I H+ R + T S + V+ +L + E ++AR VFD++P + + W+ +I Y
Sbjct: 21 IHQHLLKRSL-TLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYA 79
Query: 149 KNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYI 208
N L L+ ML++ V P +T+ V+ CA L A+ + K +H + +
Sbjct: 80 SNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMY 139
Query: 209 LSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM-EVE 267
+ ALVD YAKCG ++++ +VFD + + + WNAMI+G ++H D I +F M ++
Sbjct: 140 VCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRID 199
Query: 268 NVLPDSITFVGILKACSHCGLVNEGR 293
+ P+ T VG+ A G + EG+
Sbjct: 200 GLSPNLSTIVGMFPALGRAGALREGK 225
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 140/292 (47%), Gaps = 13/292 (4%)
Query: 75 TYPSLVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAGECDIARKVFDKM 132
TYP ++ A A I HV D + +++ K GE ++A KVFD+M
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEM 164
Query: 133 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-VEPDGFTFASVVTGCARLGALCNA 191
P RD+V WN +I G+ + D + LF M + + P+ T + R GAL
Sbjct: 165 PKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
Query: 192 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 251
K VHG + ++ ++D+YAK I +++VFD + + W+AMI G +
Sbjct: 225 KAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVEN 284
Query: 252 GLALDAIAVFSRMEVEN----VLPDSITFVGILKACSHCGLVNEGR-EHFNIMQNRFLIQ 306
+ +A VF +M V + V P +I IL C+ G ++ GR H ++ F++
Sbjct: 285 EMIKEAGEVFFQMLVNDNVAMVTPVAIGL--ILMGCARFGDLSGGRCVHCYAVKAGFILD 342
Query: 307 PQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 358
+++ T++ + G+L +A + ++ DV+ + +L++ C ++ + E
Sbjct: 343 LTVQN--TIISFYAKYGSLCDAFRQFSEIGLK-DVISYNSLITGCVVNCRPE 391
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 128/268 (47%), Gaps = 17/268 (6%)
Query: 107 FSKNLVIES----LMKAGECDI-ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR 161
FS +LV+++ + +C I AR+VFD ++ VTW+ +IGGYV+N + +F
Sbjct: 236 FSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFF 295
Query: 162 GMLS----AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMY 217
ML A V P ++ GCAR G L + VH ++ L+ + ++ Y
Sbjct: 296 QMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFY 353
Query: 218 AKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFV 277
AK G + + + F + V +N++I G V+ ++ +F M + PD T +
Sbjct: 354 AKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLL 413
Query: 278 GILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP 336
G+L ACSH + G H + + + + + + ++D+ + G L+ A + M
Sbjct: 414 GVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICN--ALMDMYTKCGKLDVAKRVFDTMH 471
Query: 337 VEPDVVIWRALLSACRIH--GKKELAEF 362
+ D+V W +L IH GK+ L+ F
Sbjct: 472 -KRDIVSWNTMLFGFGIHGLGKEALSLF 498
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 210/394 (53%), Gaps = 34/394 (8%)
Query: 57 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESL 116
D A + H++++ G+ ALI+ Y +C
Sbjct: 252 DLNLALQVHSRMVRFGFNAEVEACGALINMYGKC-------------------------- 285
Query: 117 MKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 176
G+ A++VFD +++ T++ Y ++ F + L LF M + EV P+ +TFA
Sbjct: 286 ---GKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFA 342
Query: 177 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 236
++ A L L +HGL+L+ + + ++ ALV+MYAK G I+ +++ F +
Sbjct: 343 ILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR 402
Query: 237 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 296
+ WN MI+G + HGL +A+ F RM +P+ ITF+G+L+ACSH G V +G +F
Sbjct: 403 DIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYF 462
Query: 297 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
N + +F +QP ++HY +V LL +AG ++A + ++ P+E DVV WR LL+AC +
Sbjct: 463 NQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRN 522
Query: 357 ----KELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWI 412
K++AE+AI +SG +VLLSN++ + W +VR++M GV+K+ G SWI
Sbjct: 523 YRLGKKVAEYAIEKYPN-DSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWI 581
Query: 413 ELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 446
+ + H F A D H E+ I+ ++ ++ + K
Sbjct: 582 GIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIK 615
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 6/246 (2%)
Query: 85 STYARCHQPHIAHHVF----SRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTW 140
S+Y R + AH + SR D + N +I +K E ARK+FD MP R+VV+W
Sbjct: 44 SSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSW 103
Query: 141 NTLIGGYVKNVRFLDGLRLFRGM-LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 199
++ GY + + L+LF+ M S E P+ F V C+ G + K HG L
Sbjct: 104 CAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFL 163
Query: 200 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIA 259
+ + + + LV MY+ C + +V D + +SV+++ ++G G + +
Sbjct: 164 KYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLD 223
Query: 260 VFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLL 319
V + E+ + +++T++ L+ S+ +N + + M RF ++E G ++++
Sbjct: 224 VLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMV-RFGFNAEVEACGALINMY 282
Query: 320 GRAGNL 325
G+ G +
Sbjct: 283 GKCGKV 288
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 111/234 (47%), Gaps = 8/234 (3%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
A +V D +P D+ +++ + GY++ F +GL + R + + + T+ S + +
Sbjct: 190 AIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSN 249
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 244
L L A VH M+ AL++MY KCG++ +++VFD ++ + +
Sbjct: 250 LRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTI 309
Query: 245 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 304
++ +A+ +FS+M+ + V P+ TF +L + + L+ +G +++ L
Sbjct: 310 MDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG----DLLHGLVL 365
Query: 305 IQPQLEHY---GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
H +V++ ++G++E+A M D+V W ++S C HG
Sbjct: 366 KSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHG 418
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 189/356 (53%), Gaps = 13/356 (3%)
Query: 98 HVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGL 157
HV + ++D ++K + E A +F +P R V+W LI GYV+ GL
Sbjct: 387 HVGNSLVDMYAKCEMFEE---------AELIFKSLPQRTTVSWTALISGYVQKGLHGAGL 437
Query: 158 RLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMY 217
+LF M + + D TFA+V+ A +L K +H ++ N + LVDMY
Sbjct: 438 KLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMY 497
Query: 218 AKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFV 277
AKCG I + QVF+ + + WNA+I+ A +G AI F++M + PDS++ +
Sbjct: 498 AKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSIL 557
Query: 278 GILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV 337
G+L ACSHCG V +G E+F M + I P+ +HY M+DLLGR G EA ++ MP
Sbjct: 558 GVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPF 617
Query: 338 EPDVVIWRALLSACRIHGKKELAEFAIANISRLE----SGDFVLLSNMYCSLKNWHNAER 393
EPD ++W ++L+ACRIH + LAE A + +E + +V +SN+Y + W
Sbjct: 618 EPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRD 677
Query: 394 VRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
V+ M+ G++K SW+E+ IH F++ DQ+H I R + L + +G
Sbjct: 678 VKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREG 733
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 6/226 (2%)
Query: 63 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAG 120
+ A++I G+ T ++ R Q A V+ + +T S N +I +K G
Sbjct: 34 RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG 93
Query: 121 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML--SAEVEPDGFTFASV 178
+ AR +FD MP R VVTW L+G Y +N F + +LFR M S+ PD TF ++
Sbjct: 94 DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTL 153
Query: 179 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAA--LVDMYAKCGRIDVSKQVFDTVARD 236
+ GC VH ++ N L+ + L+ Y + R+D++ +F+ +
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK 213
Query: 237 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
+N +I G GL ++I +F +M P TF G+LKA
Sbjct: 214 DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 133/317 (41%), Gaps = 31/317 (9%)
Query: 35 SSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPH 94
SS +L DH F +L ++ + HA + G+ T P L +
Sbjct: 140 SSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVS------------ 187
Query: 95 IAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFL 154
N++++S + D+A +F+++P +D VT+NTLI GY K+ +
Sbjct: 188 ---------------NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYT 232
Query: 155 DGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALV 214
+ + LF M + +P FTF+ V+ L + +H L + + + ++
Sbjct: 233 ESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQIL 292
Query: 215 DMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSI 274
D Y+K R+ ++ +FD + +N +I+ + ++ F M+ +
Sbjct: 293 DFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNF 352
Query: 275 TFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG-TMVDLLGRAGNLEEACNMIK 333
F +L ++ + GR+ Q + H G ++VD+ + EEA + K
Sbjct: 353 PFATMLSIAANLSSLQMGRQLH--CQALLATADSILHVGNSLVDMYAKCEMFEEAELIFK 410
Query: 334 AMPVEPDVVIWRALLSA 350
++P + V W AL+S
Sbjct: 411 SLP-QRTTVSWTALISG 426
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/314 (38%), Positives = 186/314 (59%), Gaps = 5/314 (1%)
Query: 103 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
V D F ++ I KAGE + ARKVFD+ P R + +WN +IGG R + + +F
Sbjct: 149 VGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVD 208
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRV--KLNYILSAALVDMYAKC 220
M + +EPD FT SV C LG L A +H +L+ + K + ++ +L+DMY KC
Sbjct: 209 MKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKC 268
Query: 221 GRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL 280
GR+D++ +F+ + + +V W++MI G A +G L+A+ F +M V P+ ITFVG+L
Sbjct: 269 GRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVL 328
Query: 281 KACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 340
AC H GLV EG+ +F +M++ F ++P L HYG +VDLL R G L+EA +++ MP++P+
Sbjct: 329 SACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPN 388
Query: 341 VVIWRALLSACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNM 397
V++W L+ C G E+AE+ + LE G +V+L+N+Y W + ERVR +
Sbjct: 389 VMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKL 448
Query: 398 MKIGGVRKKRGKSW 411
MK V K S+
Sbjct: 449 MKTKKVAKIPAYSY 462
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 116/235 (49%), Gaps = 5/235 (2%)
Query: 123 DIAR-KVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTG 181
DI R ++ D+ P+ WN ++ Y+++ LD ++++ GM+ + V PD ++ V+
Sbjct: 69 DIFRSRILDQYPI--AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKA 126
Query: 182 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 241
++ K +H + + + + + +Y K G + +++VFD + W
Sbjct: 127 AVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSW 186
Query: 242 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQ 300
NA+I GL G A +A+ +F M+ + PD T V + +C G ++ + H ++Q
Sbjct: 187 NAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQ 246
Query: 301 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
+ + + +++D+ G+ G ++ A ++ + M + +VV W +++ +G
Sbjct: 247 AKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMR-QRNVVSWSSMIVGYAANG 300
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/345 (33%), Positives = 198/345 (57%), Gaps = 8/345 (2%)
Query: 112 VIESLMKAGECDIARKVFDK--MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
+I+ K+G I++K+F+ RD TWN++I GY +N +FR ML +
Sbjct: 459 LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIR 518
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
P+ T AS++ C+++G++ K +HG + + + N +++ALVDMY+K G I ++ +
Sbjct: 519 PNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDM 578
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 289
F + + MI G HG+ AI++F M+ + PD+ITFV +L ACS+ GL+
Sbjct: 579 FSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLI 638
Query: 290 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV-IWRALL 348
+EG + F M+ + IQP EHY + D+LGR G + EA +K + E ++ +W +LL
Sbjct: 639 DEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLL 698
Query: 349 SACRIHGKKELAEFAIANISRLE-----SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGV 403
+C++HG+ ELAE +++ + SG VLLSNMY + W + ++VR M+ G+
Sbjct: 699 GSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGL 758
Query: 404 RKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFD 448
+K+ G+S IE+ ++ F + DQ H I+ V++GL + + D
Sbjct: 759 KKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGD 803
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 134/257 (52%), Gaps = 11/257 (4%)
Query: 101 SRVMDTFSKNLVIESLMKAGEC---DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGL 157
SRV+ N+ + S + A +C D+ RKVFD M ++VV WNTLI YVK R +
Sbjct: 141 SRVVHNSLMNMYV-SCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEAC 199
Query: 158 RLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML---EKRVKLNYILSAALV 214
R F M+ EV+P +F +V + ++ A +GLML ++ VK +++S+A +
Sbjct: 200 RQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSA-I 258
Query: 215 DMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVF-SRMEVENVLPDS 273
MYA+ G I+ S++VFD+ ++ VWN MI + +++I +F + + ++ D
Sbjct: 259 SMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDE 318
Query: 274 ITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIK 333
+T++ A S V GR+ + F P + MV + R G++ ++ +
Sbjct: 319 VTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVFL 377
Query: 334 AMPVEPDVVIWRALLSA 350
+M E DVV W ++SA
Sbjct: 378 SMR-ERDVVSWNTMISA 393
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 123/261 (47%), Gaps = 10/261 (3%)
Query: 103 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLF-R 161
V D F + I + G+ + +R+VFD R++ WNT+IG YV+N ++ + LF
Sbjct: 248 VKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLE 307
Query: 162 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 221
+ S E+ D T+ + + L + + HG + + +L ++ +L+ MY++CG
Sbjct: 308 AIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCG 367
Query: 222 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
+ S VF ++ V WN MI+ +GL + + + M+ + D IT +L
Sbjct: 368 SVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLS 427
Query: 282 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGT---MVDLLGRAGNLEEACNMIKAMP-V 337
A S+ G++ + FLI+ ++ G ++D+ ++G + + + +
Sbjct: 428 AASNLRNKEIGKQ-----THAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYA 482
Query: 338 EPDVVIWRALLSACRIHGKKE 358
E D W +++S +G E
Sbjct: 483 ERDQATWNSMISGYTQNGHTE 503
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 109/252 (43%), Gaps = 24/252 (9%)
Query: 113 IESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM--LSAEVEP 170
+ + + G +AR++FD +P V WNT+I G++ N + L + M +
Sbjct: 46 LSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNC 105
Query: 171 DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMY------AKCGRID 224
D +T++S + CA L K VH ++ + ++ +L++MY C D
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYD 165
Query: 225 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
V ++VFD + R +V WN +I+ G +A F M V P ++FV + A S
Sbjct: 166 VVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVS 225
Query: 285 HCGLVNEGREHFNIM--------QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP 336
+ + + +M ++ F++ + Y + D+ E+ +
Sbjct: 226 ISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDI--------ESSRRVFDSC 277
Query: 337 VEPDVVIWRALL 348
VE ++ +W ++
Sbjct: 278 VERNIEVWNTMI 289
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
+ F + +++ KAG A +F + R+ VT+ T+I GY ++ + LF M
Sbjct: 555 NVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQ 614
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAA------LVDMYA 218
+ ++PD TF +V++ C+ G + GL + + ++ Y + + + DM
Sbjct: 615 ESGIKPDAITFVAVLSACSYSGLI-----DEGLKIFEEMREVYNIQPSSEHYCCITDMLG 669
Query: 219 KCGRIDVSKQVFDTVARDH--VSVWNAMINGLAVHG 252
+ GR++ + + + + +W +++ +HG
Sbjct: 670 RVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHG 705
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/435 (31%), Positives = 228/435 (52%), Gaps = 15/435 (3%)
Query: 28 SWSITQRSSHSLTDHSV--FHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALIS 85
S S QR H + +V ++ ++ S D + H ++ + G V +L+S
Sbjct: 445 SLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLS 504
Query: 86 TYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVT 139
++ + V ++ D F V+ + GE + +FD M + +V+
Sbjct: 505 ACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVS 564
Query: 140 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 199
WNT+I GY++N L +FR M+ ++ G + V C+ L +L + H L
Sbjct: 565 WNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL 624
Query: 200 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIA 259
+ ++ + ++ +L+DMYAK G I S +VF+ + + WNAMI G +HGLA +AI
Sbjct: 625 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIK 684
Query: 260 VFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLL 319
+F M+ PD +TF+G+L AC+H GL++EG + + M++ F ++P L+HY ++D+L
Sbjct: 685 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDML 744
Query: 320 GRAGNLEEACNMI-KAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE---SGDF 375
GRAG L++A ++ + M E DV IW++LLS+CRIH E+ E A + LE ++
Sbjct: 745 GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENY 804
Query: 376 VLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQ---SHAEMK 432
VLLSN+Y L W + +VR M +RK G SWIEL + F ++ E+K
Sbjct: 805 VLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIK 864
Query: 433 AIHRVLEGLIQRAKF 447
++ +LE I + +
Sbjct: 865 SLWSILEMKISKMGY 879
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 9/250 (3%)
Query: 112 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA-EVEP 170
+I G D +R VFD + +++ WN +I Y +N + + L F M+S ++ P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 171 DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF 230
D FT+ V+ CA + + VHGL+++ + + + ALV Y G + + Q+F
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 231 DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVEN----VLPDSITFVGILKACSHC 286
D + ++ WN+MI + +G + ++ + M EN +PD T V +L C+
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 287 GLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
+ G+ H ++ R + +L ++D+ + G + A MI M +VV W
Sbjct: 306 REIGLGKGVHGWAVKLR--LDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWN 362
Query: 346 ALLSACRIHG 355
++ G
Sbjct: 363 TMVGGFSAEG 372
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 120/247 (48%), Gaps = 12/247 (4%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA--E 167
N +++ K G A+ +F ++VV+WNT++GG+ + R ML+ +
Sbjct: 331 NALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGED 390
Query: 168 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 227
V+ D T + V C L + K +H L++ N +++ A V YAKCG + ++
Sbjct: 391 VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQ 450
Query: 228 QVFDTVARDHVSVWNAMINGLAVHG---LALDAIAVFSRMEVENVLPDSITFVGILKACS 284
+VF + V+ WNA+I G A L+LDA +M++ +LPDS T +L ACS
Sbjct: 451 RVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDA---HLQMKISGLLPDSFTVCSLLSACS 507
Query: 285 HCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 343
+ G+E H I++N ++ L Y +++ L G L + AM + +V
Sbjct: 508 KLKSLRLGKEVHGFIIRN--WLERDLFVYLSVLSLYIHCGELCTVQALFDAME-DKSLVS 564
Query: 344 WRALLSA 350
W +++
Sbjct: 565 WNTVITG 571
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 89/189 (47%), Gaps = 6/189 (3%)
Query: 103 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
V D F N ++ G A ++FD MP R++V+WN++I + N + L
Sbjct: 219 VEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGE 278
Query: 163 MLSAEVE----PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYA 218
M+ + PD T +V+ CAR + K VHG ++ R+ +L+ AL+DMY+
Sbjct: 279 MMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYS 338
Query: 219 KCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEV--ENVLPDSITF 276
KCG I ++ +F +V WN M+ G + G V +M E+V D +T
Sbjct: 339 KCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTI 398
Query: 277 VGILKACSH 285
+ + C H
Sbjct: 399 LNAVPVCFH 407
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 86/181 (47%), Gaps = 4/181 (2%)
Query: 202 RVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVF 261
R++ + +L ++ MYA CG D S+ VFD + ++ WNA+I+ + + L + + F
Sbjct: 115 RLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETF 174
Query: 262 SRM-EVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLG 320
M ++LPD T+ ++KAC+ V G ++ L++ +V G
Sbjct: 175 IEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVG-NALVSFYG 233
Query: 321 RAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGDFVLLSN 380
G + +A + MP E ++V W +++ +G E + + + E+GD + +
Sbjct: 234 THGFVTDALQLFDIMP-ERNLVSWNSMIRVFSDNGFSEESFLLLGEMME-ENGDGAFMPD 291
Query: 381 M 381
+
Sbjct: 292 V 292
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/340 (35%), Positives = 199/340 (58%), Gaps = 22/340 (6%)
Query: 120 GECDIARKVFDKMPVR-DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 178
G+ D AR+VFD+ P + ++V W +I Y +N ++ + LF+ M + ++E DG
Sbjct: 114 GDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVA 173
Query: 179 VTGCARLGALCNAKWVHG--LMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 236
++ CA LGA+ + ++ + ++R+ ++ L +L++MY K G + ++++FD R
Sbjct: 174 LSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRK 233
Query: 237 HVSVWNAMINGLAVHGLALDAIAVFSRMEVEN------VLPDSITFVGILKACSHCGLVN 290
V+ + +MI G A++G A +++ +F +M+ + + P+ +TF+G+L ACSH GLV
Sbjct: 234 DVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVE 293
Query: 291 EGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
EG+ HF M + ++P+ H+G MVDL R+G+L++A I MP++P+ VIWR LL A
Sbjct: 294 EGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGA 353
Query: 351 CRIHGKKELAEFA---IANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKR 407
C +HG EL E I + R GD+V LSN+Y S W ++R+ VRK+R
Sbjct: 354 CSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDR-----VRKRR 408
Query: 408 --GKSWIELGDSIHQFNAADQSHAE---MKAIHRVLEGLI 442
GKSWIELG I++F + ++ E M I VL L+
Sbjct: 409 MPGKSWIELGSIINEFVSGPDNNDEQLMMGEISEVLRCLV 448
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 100/195 (51%), Gaps = 12/195 (6%)
Query: 171 DGFT--FASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS--AALVDMYAKCGRIDVS 226
D F+ FA V+ + +L + + +H L+ +++ N ++ +LV Y+ G +D +
Sbjct: 63 DSFSVLFAIKVSSAQKASSL-DGRQIHALV--RKLGFNAVIQIQTSLVGFYSSVGDVDYA 119
Query: 227 KQVFD-TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 285
+QVFD T + ++ +W AMI+ + +++AI +F RME E + D + L AC+
Sbjct: 120 RQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACAD 179
Query: 286 CGLVNEGREHF--NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 343
G V G E + +I + R L L +++++ ++G E+A + + DV
Sbjct: 180 LGAVQMGEEIYSRSIKRKRRLAM-DLTLRNSLLNMYVKSGETEKARKLFDE-SMRKDVTT 237
Query: 344 WRALLSACRIHGKKE 358
+ +++ ++G+ +
Sbjct: 238 YTSMIFGYALNGQAQ 252
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 89/190 (46%), Gaps = 16/190 (8%)
Query: 79 LVAALISTYARCHQPHIAHHVFSR--------VMDTFSKNLVIESLMKAGECDIARKVFD 130
+V +S A + ++SR MD +N ++ +K+GE + ARK+FD
Sbjct: 169 IVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFD 228
Query: 131 KMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE------VEPDGFTFASVVTGCAR 184
+ +DV T+ ++I GY N + + L LF+ M + + + P+ TF V+ C+
Sbjct: 229 ESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSH 288
Query: 185 LGALCNAKW-VHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWN 242
G + K ++++ +K +VD++ + G + + + + + + + +W
Sbjct: 289 SGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWR 348
Query: 243 AMINGLAVHG 252
++ ++HG
Sbjct: 349 TLLGACSLHG 358
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 123/368 (33%), Positives = 203/368 (55%), Gaps = 5/368 (1%)
Query: 83 LISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTW 140
LI+ Y R H+A +F + + + S + +I+ + +GE + A+++F+ MP ++VV+W
Sbjct: 202 LINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSW 261
Query: 141 NTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLE 200
TLI G+ + + + + ML ++P+ +T A+V++ C++ GAL + +HG +L+
Sbjct: 262 TTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILD 321
Query: 201 KRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAV 260
+KL+ + ALVDMYAKCG +D + VF + + W AMI G AVHG AI
Sbjct: 322 NGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQC 381
Query: 261 FSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLG 320
F +M PD + F+ +L AC + V+ G F+ M+ + I+P L+HY +VDLLG
Sbjct: 382 FRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLG 441
Query: 321 RAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLES---GDFVL 377
RAG L EA +++ MP+ PD+ W AL AC+ H AE N+ L+ G ++
Sbjct: 442 RAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIF 501
Query: 378 LSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRV 437
L + S N + E+ R ++ + G S+IEL +++F+A D SH + I
Sbjct: 502 LDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLK 561
Query: 438 LEGLIQRA 445
L+ +I A
Sbjct: 562 LDEIISLA 569
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 129/285 (45%), Gaps = 34/285 (11%)
Query: 115 SLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFT 174
SL+K+ D + +F R+ N LI G +N RF +R F ML V+PD T
Sbjct: 71 SLLKSP--DYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLT 128
Query: 175 FASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF---- 230
F V+ ++LG + +H L+ V + + +LVDMYAK G++ + QVF
Sbjct: 129 FPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESP 188
Query: 231 DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVN 290
D + ++ + +WN +ING A +F M N S ++ ++K G +N
Sbjct: 189 DRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERN----SGSWSTLIKGYVDSGELN 244
Query: 291 EGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRAL 347
++ F +M + ++ + T+++ + G+ E A + M ++P+ A+
Sbjct: 245 RAKQLFELMPEKNVVS-----WTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAV 299
Query: 348 LSAC----------RIHGKKELAEFAIANISRLESGDFVLLSNMY 382
LSAC RIHG + + N +L+ L +MY
Sbjct: 300 LSACSKSGALGSGIRIHG------YILDNGIKLDRAIGTALVDMY 338
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/354 (36%), Positives = 200/354 (56%), Gaps = 20/354 (5%)
Query: 101 SRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLF 160
+ ++D +SKN G+ A K+FD+MPVRDV +WN LI G V R + + L+
Sbjct: 148 TTLLDAYSKN---------GDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELY 198
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWV-HGLMLEKRVKLNYILSAALVDMYAK 219
+ M + + T + + C+ LG + + + HG + N I+S A +DMY+K
Sbjct: 199 KRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSND-----NVIVSNAAIDMYSK 253
Query: 220 CGRIDVSKQVFDT-VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVG 278
CG +D + QVF+ + V WN MI G AVHG A A+ +F ++E + PD ++++
Sbjct: 254 CGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLA 313
Query: 279 ILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE 338
L AC H GLV G FN M + ++ ++HYG +VDLL RAG L EA ++I +M +
Sbjct: 314 ALTACRHAGLVEYGLSVFNNMACKG-VERNMKHYGCVVDLLSRAGRLREAHDIICSMSMI 372
Query: 339 PDVVIWRALLSACRIHGKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVR 395
PD V+W++LL A I+ E+AE A I + GDFVLLSN+Y + W + RVR
Sbjct: 373 PDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVR 432
Query: 396 NMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
+ M+ V+K G S+IE +IH+F +D+SH + + I+ ++ + + + DG
Sbjct: 433 DDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDG 486
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 113/245 (46%), Gaps = 15/245 (6%)
Query: 120 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS------AEVEPDGF 173
G+ A ++F +P WN +I G+ + +R ML A D
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 174 TFASVVTGCARLGALCNA--KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 231
T + + CAR ALC++ +H + + + + +L L+D Y+K G + + ++FD
Sbjct: 111 TCSFTLKACAR--ALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFD 168
Query: 232 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 291
+ V+ WNA+I GL A +A+ ++ RME E + +T V L ACSH G V E
Sbjct: 169 EMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKE 228
Query: 292 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 351
G F+ N +I +D+ + G +++A + + + VV W +++
Sbjct: 229 GENIFHGYSNDNVIVSN-----AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGF 283
Query: 352 RIHGK 356
+HG+
Sbjct: 284 AVHGE 288
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 138/407 (33%), Positives = 224/407 (55%), Gaps = 17/407 (4%)
Query: 57 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIE 114
D A + H + G T + AL+ Y +C +F + + S +V++
Sbjct: 126 DLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLD 185
Query: 115 SLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGF- 173
+++K + R+VF +MP R+ V W ++ GY+ + L L M+ F
Sbjct: 186 TVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFV 245
Query: 174 TFASVVTGCARLGALCNAKWVHGLMLEKRVKL-------NYILSAALVDMYAKCGRIDVS 226
T S+++ CA+ G L +WVH L+K + + + ++ ALVDMYAKCG ID S
Sbjct: 246 TLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSS 305
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 286
VF + + +V WNA+ +GLA+HG I +F +M + V PD +TF +L ACSH
Sbjct: 306 MNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHS 364
Query: 287 GLVNEGREHFNIMQNRFL-IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
G+V+EG F+ + RF ++P+++HY MVDLLGRAG +EEA +++ MPV P+ V+
Sbjct: 365 GIVDEGWRCFHSL--RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLG 422
Query: 346 ALLSACRIHGKKELAEFAIANISRLESGDF---VLLSNMYCSLKNWHNAERVRNMMKIGG 402
+LL +C +HGK E+AE + ++ G+ +L+SNMY + A+ +R ++ G
Sbjct: 423 SLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRG 482
Query: 403 VRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
+RK G S I + DS+H+F++ D+SH K I+ L +I+R + G
Sbjct: 483 IRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAG 529
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 132/292 (45%), Gaps = 43/292 (14%)
Query: 106 TFSKNLVIESLMKAGECDIARKVFDKMPV--RDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
++ N + + +GE A+K+FD++P+ +D V W TL+ + + ++ ++LF M
Sbjct: 43 SYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEM 102
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
VE D + + CA+L L A+ HG+ ++ V + + AL+DMY KCG +
Sbjct: 103 RRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLV 162
Query: 224 DVSKQVFD----------TVARDHVSVWNAMINGLAVHGLALDAIAV------------- 260
K++F+ TV D V W + G V + AV
Sbjct: 163 SEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAG 222
Query: 261 FSRMEVENVLPDS----------ITFVGILKACSHCGLVNEGR-EHFNIMQNRFLIQPQL 309
F+R EV +L + +T +L AC+ G + GR H ++ ++ +
Sbjct: 223 FTR-EVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEA 281
Query: 310 EHYGTM-----VDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
+ M VD+ + GN++ + N+ + M + +VV W AL S +HGK
Sbjct: 282 SYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR-KRNVVTWNALFSGLAMHGK 332
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 188/345 (54%), Gaps = 7/345 (2%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D N +I+ K+ + A +F+ M RD+ TWN+++ + L LF ML
Sbjct: 296 DIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML 355
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLM----LEKRVKLNYILSAALVDMYAKC 220
+ + PD T +V+ C RL +L + +HG M L R N + +L+DMY KC
Sbjct: 356 CSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKC 415
Query: 221 GRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL 280
G + ++ VFD++ + WN MING V A+ +FS M V PD ITFVG+L
Sbjct: 416 GDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLL 475
Query: 281 KACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 340
+ACSH G +NEGR M+ + I P +HY ++D+LGRA LEEA + + P+ +
Sbjct: 476 QACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDN 535
Query: 341 VVIWRALLSACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNM 397
V+WR++LS+CR+HG K+LA A + LE G +VL+SN+Y + VR+
Sbjct: 536 PVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDA 595
Query: 398 MKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLI 442
M+ V+K G SWI L + +H F +Q+H E K+IH L +I
Sbjct: 596 MRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVI 640
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 159/355 (44%), Gaps = 43/355 (12%)
Query: 15 LIHGAIKFGSLSESWSITQ--RSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHG 72
LI G + GS ++ + R++ L D F +L+ S A M+ + K H G
Sbjct: 132 LISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDA-MELSDVKKVHGLAFKLG 190
Query: 73 YATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKM 132
+ + + + L+++Y++ F V D A+KVFD++
Sbjct: 191 FDSDCYVGSGLVTSYSK----------FMSVED-------------------AQKVFDEL 221
Query: 133 PVRD-VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA 191
P RD V WN L+ GY + RF D L +F M V T SV++ G + N
Sbjct: 222 PDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNG 281
Query: 192 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 251
+ +HGL ++ + ++S AL+DMY K ++ + +F+ + + WN++ L VH
Sbjct: 282 RSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSV---LCVH 338
Query: 252 GLALD---AIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQ 308
D +A+F RM + PD +T +L C + +GRE M L+ +
Sbjct: 339 DYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRK 398
Query: 309 LEH---YGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
+ + +++D+ + G+L +A + +M V+ D W +++ + ELA
Sbjct: 399 SSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVK-DSASWNIMINGYGVQSCGELA 452
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 139/303 (45%), Gaps = 35/303 (11%)
Query: 48 VLQRSRASMDSTTAAKTHAKLIVHGY-ATYPSLVAALISTYARCHQPHIAHHVFSRVMDT 106
LQR D + + H ++ G+ P +L++ YA+C
Sbjct: 66 TLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKC---------------- 109
Query: 107 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 166
L+ +++ G + RDV +N LI G+V N LD + +R M +
Sbjct: 110 ---GLMRRAVLVFGGSE-----------RDVFGYNALISGFVVNGSPLDAMETYREMRAN 155
Query: 167 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
+ PD +TF S++ G + L + K VHGL + + + + LV Y+K ++ +
Sbjct: 156 GILPDKYTFPSLLKGSDAM-ELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDA 214
Query: 227 KQVFDTVA-RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 285
++VFD + RD +WNA++NG + DA+ VFS+M E V T +L A +
Sbjct: 215 QKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTV 274
Query: 286 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
G ++ GR + + + + ++D+ G++ LEEA ++ +AM E D+ W
Sbjct: 275 SGDIDNGRS-IHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD-ERDLFTWN 332
Query: 346 ALL 348
++L
Sbjct: 333 SVL 335
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
Query: 182 CARLGALCNAKWVHGLMLEKR-VKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 240
CA+ + + +HG M+ K + + +LV+MYAKCG + + VF RD V
Sbjct: 70 CAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSERD-VFG 128
Query: 241 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 300
+NA+I+G V+G LDA+ + M +LPD TF +LK L + + H +
Sbjct: 129 YNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHG--LA 186
Query: 301 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
+ +V + ++E+A + +P D V+W AL++
Sbjct: 187 FKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 236
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 224 bits (572), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 121/345 (35%), Positives = 191/345 (55%), Gaps = 7/345 (2%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N +I + GE AR+VFD M RD TW +I Y + L+ L LF M V
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVR 328
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
P + S+++ CA L +L + VH ++ + + +++ L+ MY KCG + +K V
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLV 388
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 289
FD + + +WN++I+G A HGL +A+ +F M +P+ +T + IL ACS+ G +
Sbjct: 389 FDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKL 448
Query: 290 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 349
EG E F M+++F + P +EHY VD+LGRAG +++A +I++M ++PD +W ALL
Sbjct: 449 EEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLG 508
Query: 350 ACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKK 406
AC+ H + +LAE A + E +G +VLLS++ S W + VR M+ V K
Sbjct: 509 ACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKF 568
Query: 407 RGKSWIELGDSIHQFNAAD-QSHAEMKAIHRVLE---GLIQRAKF 447
G SWIE+G +H F ++H E I +LE GL++ A +
Sbjct: 569 PGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGY 613
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 124/259 (47%), Gaps = 12/259 (4%)
Query: 103 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
V D + +I L + G D AR +FD+M R+VVTW T+I GY +N R +LF
Sbjct: 169 VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEV 228
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
M E ++ S++ G G + +A+ +M K V I A++ + + G
Sbjct: 229 M----PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPV----IACNAMIVGFGEVGE 280
Query: 223 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
I +++VFD + + W MI G L+A+ +F++M+ + V P + + IL
Sbjct: 281 ISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSV 340
Query: 283 CSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 341
C+ + GR+ H ++++ +F + ++ + + G L +A ++ D+
Sbjct: 341 CATLASLQYGRQVHAHLVRCQF--DDDVYVASVLMTMYVKCGELVKA-KLVFDRFSSKDI 397
Query: 342 VIWRALLSACRIHGKKELA 360
++W +++S HG E A
Sbjct: 398 IMWNSIISGYASHGLGEEA 416
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 17/232 (7%)
Query: 108 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 167
S N ++ G AR++FD+M R+VV+WN L+ GY+KN ++ +F M
Sbjct: 50 SWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERN 109
Query: 168 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 227
V ++ ++V G + G + A+ + M E+ ++ L+D GRID ++
Sbjct: 110 V----VSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLID----DGRIDKAR 161
Query: 228 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 287
+++D + V MI GL G +A +F M NV +T+ ++
Sbjct: 162 KLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV----VTWTTMITGYRQNN 217
Query: 288 LVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEP 339
V+ R+ F +M + + + +M+ +G +E+A + MP++P
Sbjct: 218 RVDVARKLFEVMPEKTEVS-----WTSMLLGYTLSGRIEDAEEFFEVMPMKP 264
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 74 ATYPSLV------AALIS-TYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIAR 126
++PSL+ A L S Y R H+ F D + ++++ +K GE A+
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDD--DVYVASVLMTMYVKCGELVKAK 386
Query: 127 KVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLG 186
VFD+ +D++ WN++I GY + + L++F M S+ P+ T +++T C+ G
Sbjct: 387 LVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAG 446
Query: 187 ALCNAKWVHGLMLEKRVKLNYILSAAL------VDMYAKCGRIDVSKQVFDTVA-RDHVS 239
L GL + + ++ + ++ + VDM + G++D + ++ +++ + +
Sbjct: 447 KL-----EEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDAT 501
Query: 240 VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFV 277
VW A++ H LD V ++ EN ++ T+V
Sbjct: 502 VWGALLGACKTHS-RLDLAEVAAKKLFENEPDNAGTYV 538
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 113/249 (45%), Gaps = 18/249 (7%)
Query: 113 IESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDG 172
I L + G+ + ARK FD + + + +WN+++ GY N + +LF M V
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV---- 79
Query: 173 FTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDT 232
++ +V+G + + A+ V LM E+ N + A+V Y + G + ++ +F
Sbjct: 80 VSWNGLVSGYIKNRMIVEARNVFELMPER----NVVSWTAMVKGYMQEGMVGEAESLFWR 135
Query: 233 VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEG 292
+ + W M GL G A ++ M V++V+ + G+ + G V+E
Sbjct: 136 MPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCRE----GRVDEA 191
Query: 293 REHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACR 352
R F+ M+ R ++ + TM+ + ++ A + + MP E V W ++L
Sbjct: 192 RLIFDEMRERNVVT-----WTTMITGYRQNNRVDVARKLFEVMP-EKTEVSWTSMLLGYT 245
Query: 353 IHGKKELAE 361
+ G+ E AE
Sbjct: 246 LSGRIEDAE 254
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 182/305 (59%), Gaps = 7/305 (2%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N +I+ K G+ +A ++F + +V+TWN +I YV + + LF M+S +
Sbjct: 472 NSLIDLYGKMGDLTVAWRMFCEADT-NVITWNAMIASYVHCEQSEKAIALFDRMVSENFK 530
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
P T +++ C G+L + +H + E ++N LSAAL+DMYAKCG ++ S+++
Sbjct: 531 PSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSREL 590
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 289
FD + WN MI+G +HG AIA+F +ME +V P TF+ +L AC+H GLV
Sbjct: 591 FDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLV 650
Query: 290 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 349
+G++ F + +++ ++P L+HY +VDLL R+GNLEEA + + +MP PD VIW LLS
Sbjct: 651 EQGKKLF-LKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLS 709
Query: 350 ACRIHGKKE----LAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRK 405
+C HG+ E +AE A+A+ + G +++L+NMY + W AER R MM+ GV K
Sbjct: 710 SCMTHGEFEMGIRMAERAVASDPQ-NDGYYIMLANMYSAAGKWEEAERAREMMRESGVGK 768
Query: 406 KRGKS 410
+ G S
Sbjct: 769 RAGHS 773
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 142/285 (49%), Gaps = 17/285 (5%)
Query: 95 IAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVR-DVVTWNTLIGGYVKNVRF 153
+ H FS +D+ N ++ K +A K+F ++ + WNT++ GY K
Sbjct: 357 VIRHCFS--LDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCH 414
Query: 154 LDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAAL 213
+ + LFR + + +E D + SV++ C+ +GA+ K +H +++ + L + +L
Sbjct: 415 VKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSL 474
Query: 214 VDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDS 273
+D+Y K G + V+ ++F A +V WNAMI + AIA+F RM EN P S
Sbjct: 475 IDLYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSS 533
Query: 274 ITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQ----LEHYGTMVDLLGRAGNLEEAC 329
IT V +L AC + G + G+ M +R++ + + L ++D+ + G+LE++
Sbjct: 534 ITLVTLLMACVNTGSLERGQ-----MIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSR 588
Query: 330 NMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGD 374
+ A + D V W ++S +HG E AIA ++E D
Sbjct: 589 ELFDA-GNQKDAVCWNVMISGYGMHGD---VESAIALFDQMEESD 629
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 117/260 (45%), Gaps = 10/260 (3%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
+ F + +I S G+ +++ +VF + RD+ WN++I + N + L F ML
Sbjct: 58 NIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSML 117
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEK-RVKLNYILSAALVDMYAKCGRI 223
+ PD FT VV+ CA L +VHGL+L+ N + A+ V Y+KCG +
Sbjct: 118 LSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFL 177
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM-----EVENVLPDSITFVG 278
+ VFD + V W A+I+G +G + + +M +V+ P+ T
Sbjct: 178 QDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDK--PNPRTLEC 235
Query: 279 ILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE 338
+ACS+ G + EGR L + +M ++GN EA + + E
Sbjct: 236 GFQACSNLGALKEGRCLHGFAVKNGLASSKFVQ-SSMFSFYSKSGNPSEAYLSFRELGDE 294
Query: 339 PDVVIWRALLSACRIHGKKE 358
D+ W +++++ G E
Sbjct: 295 -DMFSWTSIIASLARSGDME 313
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 122/260 (46%), Gaps = 9/260 (3%)
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
K+G A F ++ D+ +W ++I ++ + +F M + + PDG +
Sbjct: 277 KSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISC 336
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD- 236
++ ++ + K HG ++ L+ + +L+ MY K + V++++F ++ +
Sbjct: 337 LINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEG 396
Query: 237 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-H 295
+ WN M+ G + I +F +++ + DS + ++ +CSH G V G+ H
Sbjct: 397 NKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLH 456
Query: 296 FNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
+++ + + +++DL G+ G+L A M + +V+ W A++ A +H
Sbjct: 457 CYVVKTS--LDLTISVVNSLIDLYGKMGDLTVAWRMF--CEADTNVITWNAMI-ASYVHC 511
Query: 356 KKELAEFAIANISRLESGDF 375
E +E AIA R+ S +F
Sbjct: 512 --EQSEKAIALFDRMVSENF 529
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 3/179 (1%)
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE---PDGFT 174
K G A VFD+MP RDVV W +I G+V+N GL M SA + P+ T
Sbjct: 173 KCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRT 232
Query: 175 FASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA 234
C+ LGAL + +HG ++ + + + +++ Y+K G + F +
Sbjct: 233 LECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELG 292
Query: 235 RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR 293
+ + W ++I LA G ++ +F M+ + + PD + ++ LV +G+
Sbjct: 293 DEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGK 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
Query: 195 HGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLA 254
+ L++ + N +++ L+ YA G+ ++S +VF V R + +WN++I +G
Sbjct: 47 NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDY 106
Query: 255 LDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGT 314
++ F M + PD T ++ AC+ + G ++ +
Sbjct: 107 ARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGAS 166
Query: 315 MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 358
V + G L++AC + MP + DVV W A++S +G+ E
Sbjct: 167 FVYFYSKCGFLQDACLVFDEMP-DRDVVAWTAIISGHVQNGESE 209
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 177/301 (58%), Gaps = 7/301 (2%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D + N++I+ L+KA E AR++FD MP+RD+V+WN+LI GY + + ++LF M+
Sbjct: 182 DVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMV 241
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
+ ++PD S ++ CA+ G K +H KR+ ++ L+ LVD YAKCG ID
Sbjct: 242 ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFID 301
Query: 225 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
+ ++F+ + + WNAMI GLA+HG + F +M + PD +TF+ +L CS
Sbjct: 302 TAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCS 361
Query: 285 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE----PD 340
H GLV+E R F+ M++ + + +++HYG M DLLGRAG +EEA MI+ MP +
Sbjct: 362 HSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREK 421
Query: 341 VVIWRALLSACRIHGKKELAEFA---IANISRLESGDFVLLSNMYCSLKNWHNAERVRNM 397
++ W LL CRIHG E+AE A + +S + G + ++ MY + + W +VR +
Sbjct: 422 LLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREI 481
Query: 398 M 398
+
Sbjct: 482 I 482
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/388 (34%), Positives = 202/388 (52%), Gaps = 35/388 (9%)
Query: 63 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 122
+ H +I G+ + A+LI+ YA C R+ D+
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANC----------KRIGDS---------------- 279
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
RKVFD+ V W L+ GY N + D L +F GML + P+ TFAS + C
Sbjct: 280 ---RKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSC 336
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 242
+ LG L K +HG+ ++ ++ + + +LV MY+ G ++ + VF + + + WN
Sbjct: 337 SALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWN 396
Query: 243 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 302
++I G A HG A +F +M N PD ITF G+L ACSHCG + +GR+ F M +
Sbjct: 397 SIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSG 456
Query: 303 F-LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG---KKE 358
I +++HY MVD+LGR G L+EA +I+ M V+P+ ++W ALLSACR+H + E
Sbjct: 457 INHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGE 516
Query: 359 LAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSI 418
A AI N+ S +VLLSN+Y S W N ++R MK G+ KK G SW+ +
Sbjct: 517 KAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKK 576
Query: 419 HQFNAADQSHAEMKAIHRVLEGLIQRAK 446
H+F + DQ H I+ LE L ++ K
Sbjct: 577 HEFFSGDQPHCS--RIYEKLEFLREKLK 602
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 143/268 (53%), Gaps = 2/268 (0%)
Query: 103 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
V DT + N ++ ++ G+ D A K+F +MP ++V++W T+I G +N R + L LF+
Sbjct: 156 VKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKN 215
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
ML ++ F V+T CA A VHGL+++ +SA+L+ YA C R
Sbjct: 216 MLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKR 275
Query: 223 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
I S++VFD + V+VW A+++G +++ DA+++FS M ++LP+ TF L +
Sbjct: 276 IGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNS 335
Query: 283 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 342
CS G ++ G+E + + ++ ++V + +GN+ +A ++ + + +V
Sbjct: 336 CSALGTLDWGKEMHGVAV-KLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIV 393
Query: 343 IWRALLSACRIHGKKELAEFAIANISRL 370
W +++ C HG+ + A + RL
Sbjct: 394 SWNSIIVGCAQHGRGKWAFVIFGQMIRL 421
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 94/180 (52%), Gaps = 8/180 (4%)
Query: 100 FSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRL 159
FS ++ ++ ++I + + + D AR+VF+++P V + +I GY ++ R +D L L
Sbjct: 29 FSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNL 88
Query: 160 FRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK 219
F M +V ++ S+++GC G + A + M E+ V + A+V+ +
Sbjct: 89 FDEMPVRDV----VSWNSMISGCVECGDMNTAVKLFDEMPERSV----VSWTAMVNGCFR 140
Query: 220 CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGI 279
G++D ++++F + + WN+M++G G DA+ +F +M +NV+ + G+
Sbjct: 141 SGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGL 200
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 90/184 (48%), Gaps = 21/184 (11%)
Query: 222 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
RID +++VF+ V HVS++ MI G +DA+ +F M V +V +++ ++
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDV----VSWNSMIS 105
Query: 282 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 341
C CG +N + F+ M R ++ + MV+ R+G +++A + MPV+ D
Sbjct: 106 GCVECGDMNTAVKLFDEMPERSVVS-----WTAMVNGCFRSGKVDQAERLFYQMPVK-DT 159
Query: 342 VIWRALLSACRIHGKKELAEF--AIANISRLESGDFVLLSNMYCSL-KNWHNAERV---R 395
W ++ +HG + + A+ ++ + + + M C L +N + E + +
Sbjct: 160 AAWNSM-----VHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFK 214
Query: 396 NMMK 399
NM++
Sbjct: 215 NMLR 218
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/405 (31%), Positives = 212/405 (52%), Gaps = 36/405 (8%)
Query: 51 RSRASMDS-TTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSK 109
R+ AS+DS TT + HA +I G+ + ++ +++ Y RC
Sbjct: 221 RASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRC------------------- 261
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
G A+ F +M +D++TWNTLI ++ + L +F+ S
Sbjct: 262 ----------GYLSEAKHYFHEMEDKDLITWNTLISE-LERSDSSEALLMFQRFESQGFV 310
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
P+ +TF S+V CA + AL + +HG + + N L+ AL+DMYAKCG I S++V
Sbjct: 311 PNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRV 370
Query: 230 F-DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 288
F + V R ++ W +M+ G HG +A+ +F +M + PD I F+ +L AC H GL
Sbjct: 371 FGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGL 430
Query: 289 VNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 348
V +G ++FN+M++ + I P + Y +VDLLGRAG + EA +++ MP +PD W A+L
Sbjct: 431 VEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
Query: 349 SACRIHGKKEL-AEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVR 404
AC+ H L + A + L+ G +V+LS +Y + W + RVR MM++ G +
Sbjct: 491 GACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNK 550
Query: 405 KKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
K+ G SWI + + + F +D+ +++ VL LI+ + G
Sbjct: 551 KEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAG 595
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 132/283 (46%), Gaps = 14/283 (4%)
Query: 107 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 166
+ NL++ S + G + AR +FD+MP RDVV W +I GY + F M+
Sbjct: 47 LATNLIV-SYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 167 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG-RIDV 225
P+ FT +SV+ C + L VHG++++ ++ + + A+++MYA C ++
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 226 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVEN--VLPDSITFVGILKAC 283
+ +F + + W +I G G + + ++ +M +EN V P IT ++A
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA--VRAS 223
Query: 284 SHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 342
+ V G++ H ++++ F Q L +++DL R G L EA + M + D++
Sbjct: 224 ASIDSVTTGKQIHASVIKRGF--QSNLPVMNSILDLYCRCGYLSEAKHYFHEME-DKDLI 280
Query: 343 IWRALLSACRIHGKKELAEFAIANISRLESGDFVLLSNMYCSL 385
W L+S E A+ R ES FV + SL
Sbjct: 281 TWNTLISELERSDSSE----ALLMFQRFESQGFVPNCYTFTSL 319
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 222/419 (52%), Gaps = 21/419 (5%)
Query: 42 HSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVA--------ALISTYARCHQP 93
+V V R+ + +S + H +++ + +V L S+ + C
Sbjct: 359 ETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENA 418
Query: 94 HI--------AHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIG 145
+ H + + V D F +N +I+ K+G D A VF+++ R VVTWN+++
Sbjct: 419 GLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLC 478
Query: 146 GYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKL 205
G+ +N ++ + LF M + +E + TF +V+ C+ +G+L KWVH ++ +K
Sbjct: 479 GFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK- 537
Query: 206 NYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRME 265
+ AL+DMYAKCG ++ ++ VF ++ + W++MIN +HG AI+ F++M
Sbjct: 538 DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMV 597
Query: 266 VENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNL 325
P+ + F+ +L AC H G V EG+ +FN+M++ F + P EH+ +DLL R+G+L
Sbjct: 598 ESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDL 656
Query: 326 EEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRL---ESGDFVLLSNMY 382
+EA IK MP D +W +L++ CRIH K ++ + ++S + ++G + LLSN+Y
Sbjct: 657 KEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIY 716
Query: 383 CSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGL 441
W R+R+ MK ++K G S IE+ + +F A +++ + I+R L L
Sbjct: 717 AEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 123/233 (52%), Gaps = 3/233 (1%)
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
+ G A KVFD MPVRD+V W+TL+ ++N + LR+F+ M+ VEPD T S
Sbjct: 148 QTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMIS 207
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 237
VV GCA LG L A+ VHG + K L+ L +L+ MY+KCG + S+++F+ +A+ +
Sbjct: 208 VVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKN 267
Query: 238 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 297
W AMI+ + A+ FS M + P+ +T +L +C GL+ EG+
Sbjct: 268 AVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHG 327
Query: 298 IMQNRFLIQPQLEHYG-TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 349
R L P E +V+L G L + C + + + ++V W +L+S
Sbjct: 328 FAVRREL-DPNYESLSLALVELYAECGKLSD-CETVLRVVSDRNIVAWNSLIS 378
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 133/275 (48%), Gaps = 43/275 (15%)
Query: 70 VHGYA-------TYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 122
VHG+A Y SL AL+ YA C K +C
Sbjct: 325 VHGFAVRRELDPNYESLSLALVELYAECG--------------------------KLSDC 358
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
+ +V R++V WN+LI Y + L LFR M++ ++PD FT AS ++ C
Sbjct: 359 ETVLRVVSD---RNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISAC 415
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 242
G + K +HG ++ V ++ + +L+DMY+K G +D + VF+ + V WN
Sbjct: 416 ENAGLVPLGKQIHGHVIRTDVSDEFVQN-SLIDMYSKSGSVDSASTVFNQIKHRSVVTWN 474
Query: 243 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 302
+M+ G + +G +++AI++F M + + +TF+ +++ACS G + +G+ + ++
Sbjct: 475 SMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGK----WVHHK 530
Query: 303 FLIQPQLEHY--GTMVDLLGRAGNLEEACNMIKAM 335
+I + + ++D+ + G+L A + +AM
Sbjct: 531 LIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAM 565
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 138/270 (51%), Gaps = 8/270 (2%)
Query: 88 ARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGY 147
AR I +F +D N ++ K G+ + ++F+K+ ++ V+W +I Y
Sbjct: 221 ARSVHGQITRKMFD--LDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSY 278
Query: 148 VKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNY 207
+ LR F M+ + +EP+ T SV++ C +G + K VHG + + + NY
Sbjct: 279 NRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNY 338
Query: 208 -ILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEV 266
LS ALV++YA+CG++ + V V+ ++ WN++I+ A G+ + A+ +F +M
Sbjct: 339 ESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVT 398
Query: 267 ENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNL 325
+ + PD+ T + AC + GLV G++ H +++ R + + +++D+ ++G++
Sbjct: 399 QRIKPDAFTLASSISACENAGLVPLGKQIHGHVI--RTDVSDEFVQ-NSLIDMYSKSGSV 455
Query: 326 EEACNMIKAMPVEPDVVIWRALLSACRIHG 355
+ A + + VV W ++L +G
Sbjct: 456 DSASTVFNQIK-HRSVVTWNSMLCGFSQNG 484
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 127/270 (47%), Gaps = 12/270 (4%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D +IES G D +R VF+ P D + LI V + L+ ++
Sbjct: 33 DPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLV 92
Query: 165 SAEVEPDGFTFASVVTGCARLGA---LCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 221
S + F F SV+ CA G+ L VHG +++ V + ++ +L+ MY + G
Sbjct: 93 SETTQISKFVFPSVLRACA--GSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTG 150
Query: 222 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
+ +++VFD + + W+ +++ +G + A+ +F M + V PD++T + +++
Sbjct: 151 NLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVE 210
Query: 282 ACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 340
C+ G + R H I + F + L +++ + + G+L + + + + + +
Sbjct: 211 GCAELGCLRIARSVHGQITRKMFDLDETL--CNSLLTMYSKCGDLLSSERIFEKI-AKKN 267
Query: 341 VVIWRALLSACRIHGKKELAEFAIANISRL 370
V W A++S+ + + E +E A+ + S +
Sbjct: 268 AVSWTAMISS---YNRGEFSEKALRSFSEM 294
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 214/399 (53%), Gaps = 18/399 (4%)
Query: 54 ASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARC----HQPHIAHHVFSRVM--DTF 107
A DS + + ++I+ G + + +++ +R H I +V V+ D +
Sbjct: 286 AKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIY 345
Query: 108 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 167
+I+ K GE ++A VF K +WN +I Y+ + + ++ M+S
Sbjct: 346 VNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVG 405
Query: 168 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 227
V+PD TF SV+ C++L AL K +H + E R++ + +L +AL+DMY+KCG +
Sbjct: 406 VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAF 465
Query: 228 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 287
++F+++ + V W MI+ HG +A+ F M+ + PD +T + +L AC H G
Sbjct: 466 RIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAG 525
Query: 288 LVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD-VVIWRA 346
L++EG + F+ M++++ I+P +EHY M+D+LGRAG L EA +I+ P D +
Sbjct: 526 LIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLST 585
Query: 347 LLSACRIHGKKELAEFAIANISRL-------ESGDFVLLSNMYCSLKNWHNAERVRNMMK 399
L SAC +H + L + I+RL ++ +++L N+Y S ++W A RVR MK
Sbjct: 586 LFSACCLHLEHSLGD----RIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMK 641
Query: 400 IGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVL 438
G+RKK G SWIE+ D + F A D+SH + ++ L
Sbjct: 642 EMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECL 680
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 131/255 (51%), Gaps = 7/255 (2%)
Query: 120 GECD---IARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 176
G+CD +AR+VF KMP + +V WN++I GYV + + M+ P T
Sbjct: 254 GKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLT 313
Query: 177 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 236
S++ C+R L + K++HG ++ V + ++ +L+D+Y KCG ++++ VF +D
Sbjct: 314 SILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKD 373
Query: 237 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-H 295
WN MI+ G A+ V+ +M V PD +TF +L ACS + +G++ H
Sbjct: 374 VAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIH 433
Query: 296 FNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
+I ++R L ++D+ + GN +EA + ++P + DVV W ++SA HG
Sbjct: 434 LSISESRLETDELL--LSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISAYGSHG 490
Query: 356 KKELAEFAIANISRL 370
+ A + + +
Sbjct: 491 QPREALYQFDEMQKF 505
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 144/327 (44%), Gaps = 52/327 (15%)
Query: 127 KVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLG 186
+VFD+MP RDV +WNT+I + ++ L LF M S+ EP+ + ++ C+RL
Sbjct: 163 QVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLL 222
Query: 187 ALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMIN 246
L K +H ++K +L+ +++ALVDMY KC ++V+++VF + R + WN+MI
Sbjct: 223 WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIK 282
Query: 247 GLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH--------------------- 285
G G + + + +RM +E P T IL ACS
Sbjct: 283 GYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNA 342
Query: 286 --------------CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM 331
CG N F+ Q + E + M+ GN +A +
Sbjct: 343 DIYVNCSLIDLYFKCGEANLAETVFSKTQ-----KDVAESWNVMISSYISVGNWFKAVEV 397
Query: 332 IKAM---PVEPDVVIWRALLSACRIHGKKELAEFAIANI--SRLESGDFVL--LSNMYCS 384
M V+PDVV + ++L AC E + +I SRLE+ + +L L +MY
Sbjct: 398 YDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSK 457
Query: 385 LKNWHNAERVRNMMKIGGVRKKRGKSW 411
N A R+ N + KK SW
Sbjct: 458 CGNEKEAFRIFN-----SIPKKDVVSW 479
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 120/229 (52%), Gaps = 10/229 (4%)
Query: 125 ARKVFDKMPVR-DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV-EPDGFTFASVVTGC 182
AR VF+ +R DV WN+L+ GY KN F D L +F+ +L+ + PD FTF +V+
Sbjct: 58 ARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAY 117
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 242
LG + +H L+++ + +++++LV MYAK + S QVFD + V+ WN
Sbjct: 118 GALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWN 177
Query: 243 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQN 301
+I+ G A A+ +F RME P+S++ + ACS + G+E H ++
Sbjct: 178 TVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKK 237
Query: 302 RFLIQPQLEHY--GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 348
F +L+ Y +VD+ G+ LE A + + MP +V W +++
Sbjct: 238 GF----ELDEYVNSALVDMYGKCDCLEVAREVFQKMP-RKSLVAWNSMI 281
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/330 (35%), Positives = 188/330 (56%), Gaps = 3/330 (0%)
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
D+ K+ +K +VV+W + G KN F + L++F M V P+ T ++++
Sbjct: 347 DVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL 406
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 242
L L + K VHG L K + + ++ ALVDMY K G + + ++F + ++ WN
Sbjct: 407 GCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWN 466
Query: 243 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 302
M+ G A+ G + IA FS M + PD+ITF +L C + GLV EG ++F++M++R
Sbjct: 467 CMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSR 526
Query: 303 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEF 362
+ I P +EH MVDLLGR+G L+EA + I+ M ++PD IW A LS+C+IH ELAE
Sbjct: 527 YGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEI 586
Query: 363 AIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIH 419
A + LE S +++++ N+Y +L W + ER+RN+M+ VR + SWI++ ++H
Sbjct: 587 AWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVH 646
Query: 420 QFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
F A ++H + I+ L L+ K G
Sbjct: 647 IFYAEGKTHPDEGDIYFELYKLVSEMKKSG 676
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 141/299 (47%), Gaps = 39/299 (13%)
Query: 63 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAG 120
+ H ++ G + S+ +LI Y+R + ++ VF+ + D S N ++ S K G
Sbjct: 110 QIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLG 169
Query: 121 ECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 176
D A + D+M + D+VTWN+L+ GY D + + + M A ++P + +
Sbjct: 170 YVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSIS 229
Query: 177 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 236
S++ A G L K +HG +L ++ + + L+DMY K G + ++ VFD +
Sbjct: 230 SLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK 289
Query: 237 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 296
++ WN++++GL+ L DA A+ RME E + PD+IT+ + + G
Sbjct: 290 NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLG--------- 340
Query: 297 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
+P+ +D++G+ +K V P+VV W A+ S C +G
Sbjct: 341 ---------KPE-----KALDVIGK----------MKEKGVAPNVVSWTAIFSGCSKNG 375
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 135/291 (46%), Gaps = 42/291 (14%)
Query: 99 VFSRVMDTFSKNLVIESLMKAGEC---DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLD 155
+ R +D +V S+ G C A K+FD+MP RD + WN ++ +++ +
Sbjct: 13 LIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEK 72
Query: 156 GLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVD 215
+ LFR M + + T ++ C+ + +HG +L ++ N + +L+
Sbjct: 73 AVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIV 132
Query: 216 MYAKCGRIDVSKQVFDTVARDHVS-----------------------------------V 240
MY++ G++++S++VF+++ ++S
Sbjct: 133 MYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVT 192
Query: 241 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIM 299
WN++++G A GL+ DAIAV RM++ + P + + +L+A + G + G+ H I+
Sbjct: 193 WNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYIL 252
Query: 300 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
+N+ +E T++D+ + G L A M+ M ++V W +L+S
Sbjct: 253 RNQLWYDVYVET--TLIDMYIKTGYLPYA-RMVFDMMDAKNIVAWNSLVSG 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 83/168 (49%), Gaps = 6/168 (3%)
Query: 103 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
+ D + +++ K+G+ A ++F + + + +WN ++ GY R +G+ F
Sbjct: 428 ICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSV 487
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS--AALVDMYAKC 220
ML A +EPD TF SV++ C G L W + ++ R + + + +VD+ +
Sbjct: 488 MLEAGMEPDAITFTSVLSVCKNSG-LVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRS 546
Query: 221 GRIDVSKQVFDTVA-RDHVSVWNAMINGLAVH-GLALDAIAVFSRMEV 266
G +D + T++ + ++W A ++ +H L L IA + R++V
Sbjct: 547 GYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIA-WKRLQV 593
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 181/321 (56%), Gaps = 5/321 (1%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
A+ VFD+M ++VV+W ++ GY + R + +++F M + ++PD +T ++ CA
Sbjct: 324 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACAN 383
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-ARDHVSVWNA 243
+ +L HG + + +S +LV +Y KCG ID S ++F+ + RD VS W A
Sbjct: 384 VSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS-WTA 442
Query: 244 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 303
M++ A G A++ I +F +M + PD +T G++ ACS GLV +G+ +F +M + +
Sbjct: 443 MVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEY 502
Query: 304 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFA 363
I P + HY M+DL R+G LEEA I MP PD + W LLSACR G E+ ++A
Sbjct: 503 GIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWA 562
Query: 364 IANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQ 420
++ L+ + LLS++Y S W + ++R M+ V+K+ G+SWI+ +H
Sbjct: 563 AESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHS 622
Query: 421 FNAADQSHAEMKAIHRVLEGL 441
F+A D+S + I+ LE L
Sbjct: 623 FSADDESSPYLDQIYAKLEEL 643
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 151/315 (47%), Gaps = 13/315 (4%)
Query: 48 VLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMD-- 105
+L+ S ++ + + H ++I G+ +Y + + L+ YA A VF + D
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRN 204
Query: 106 TFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 165
T N ++ L+ G + A ++F M +D V+W +I G +N + + FR M
Sbjct: 205 TVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMKV 263
Query: 166 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 225
++ D + F SV+ C LGA+ K +H ++ + + + +AL+DMY KC +
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHY 323
Query: 226 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 285
+K VFD + + +V W AM+ G G A +A+ +F M+ + PD T + AC++
Sbjct: 324 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACAN 383
Query: 286 CGLVNEGREHFNIMQNRFLIQPQLEHYGT----MVDLLGRAGNLEEACNMIKAMPVEPDV 341
+ EG + I L HY T +V L G+ G+++++ + M V D
Sbjct: 384 VSSLEEGSQFHGKA-----ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DA 437
Query: 342 VIWRALLSACRIHGK 356
V W A++SA G+
Sbjct: 438 VSWTAMVSAYAQFGR 452
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 146/329 (44%), Gaps = 57/329 (17%)
Query: 69 IVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGECDIAR 126
IVH YA S STYAR VF R+ + FS N ++ + KAG
Sbjct: 47 IVHAYALMKS------STYAR--------RVFDRIPQPNLFSWNNLLLAYSKAGLISEME 92
Query: 127 KVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML---SAEVEPDGFTFASVVTGCA 183
F+K+P RD VTWN LI GY + ++ + M+ SA + T +++ +
Sbjct: 93 STFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTR--VTLMTMLKLSS 150
Query: 184 RLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK------------------------ 219
G + K +HG +++ + ++ + L+ MYA
Sbjct: 151 SNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNS 210
Query: 220 -------CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPD 272
CG I+ + Q+F + +D VS W AMI GLA +GLA +AI F M+V+ + D
Sbjct: 211 LMGGLLACGMIEDALQLFRGMEKDSVS-WAAMIKGLAQNGLAKEAIECFREMKVQGLKMD 269
Query: 273 SITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM 331
F +L AC G +NEG++ H I++ F Q + ++D+ + L A +
Sbjct: 270 QYPFGSVLPACGGLGAINEGKQIHACIIRTNF--QDHIYVGSALIDMYCKCKCLHYAKTV 327
Query: 332 IKAMPVEPDVVIWRALLSACRIHGKKELA 360
M + +VV W A++ G+ E A
Sbjct: 328 FDRMK-QKNVVSWTAMVVGYGQTGRAEEA 355
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 101/225 (44%), Gaps = 32/225 (14%)
Query: 61 AAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAG 120
++ H K I G Y ++ +L++ Y +C G
Sbjct: 390 GSQFHGKAITSGLIHYVTVSNSLVTLYGKC-----------------------------G 420
Query: 121 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 180
+ D + ++F++M VRD V+W ++ Y + R ++ ++LF M+ ++PDG T V++
Sbjct: 421 DIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVIS 480
Query: 181 GCARLGALCNAKWVHGLMLEKRVKLNYIL-SAALVDMYAKCGRIDVSKQVFDTVARDHVS 239
C+R G + + LM + + I + ++D++++ GR++ + + + + +
Sbjct: 481 ACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDA 540
Query: 240 V-WNAMINGLAVHG-LALDAIAVFSRMEVENVLPDSITFVGILKA 282
+ W +++ G L + A S +E++ P T + + A
Sbjct: 541 IGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYA 585
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/409 (33%), Positives = 213/409 (52%), Gaps = 9/409 (2%)
Query: 39 LTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHH 98
L DH + +++ S + H ++ G + LI Y A
Sbjct: 105 LPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARK 164
Query: 99 VFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDG 156
+F + + + N ++++ K+G+ AR VFD+M RDVVTW+++I GYVK +
Sbjct: 165 LFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKA 224
Query: 157 LRLFRGMLS-AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVD 215
L +F M+ + + T SV+ CA LGAL K VH +L+ + L IL +L+D
Sbjct: 225 LEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLID 284
Query: 216 MYAKCGRIDVSKQVF--DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDS 273
MYAKCG I + VF +V +WNA+I GLA HG +++ +F +M + PD
Sbjct: 285 MYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDE 344
Query: 274 ITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIK 333
ITF+ +L ACSH GLV E F ++ +P+ EHY MVD+L RAG +++A + I
Sbjct: 345 ITFLCLLAACSHGGLVKEAWHFFKSLKESG-AEPKSEHYACMVDVLSRAGLVKDAHDFIS 403
Query: 334 AMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHN 390
MP++P + ALL+ C HG ELAE + L+ G +V L+N+Y K +
Sbjct: 404 EMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRA 463
Query: 391 AERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLE 439
A +R M+ GV+K G S ++L + H+F A D++H I+ VL+
Sbjct: 464 ARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQ 512
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 136/308 (44%), Gaps = 40/308 (12%)
Query: 108 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 167
S+ L +L +G+ D A K K+ WN +I G+ + + ++ ML
Sbjct: 44 SQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFG 103
Query: 168 VEPDGFTFASVVTGCARL------GAL---------------CNAKWVHGL--------- 197
+ PD T+ ++ +RL G+L CN +H
Sbjct: 104 LLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNT-LIHMYGSFRDQASA 162
Query: 198 --MLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLAL 255
+ ++ N + +++D YAK G + ++ VFD ++ V W++MI+G G
Sbjct: 163 RKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYN 222
Query: 256 DAIAVFSR-MEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYG 313
A+ +F + M + + + +T V ++ AC+H G +N G+ H I+ + L+
Sbjct: 223 KALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQ--T 280
Query: 314 TMVDLLGRAGNLEEACNMI-KAMPVEPDVVIWRALLSACRIHG--KKELAEFAIANISRL 370
+++D+ + G++ +A ++ +A E D ++W A++ HG ++ L F S++
Sbjct: 281 SLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKI 340
Query: 371 ESGDFVLL 378
+ + L
Sbjct: 341 DPDEITFL 348
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 188/341 (55%), Gaps = 8/341 (2%)
Query: 107 FSKNLVIESLM-----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR 161
F ++V+E+ + + G+ A +FD+M ++V++WN++I YV+N + L LF+
Sbjct: 361 FLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQ 420
Query: 162 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 221
+ + + PD T AS++ A +L + +H +++ R N I+ +LV MYA CG
Sbjct: 421 ELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCG 480
Query: 222 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
++ +++ F+ + V WN++I AVHG ++ +FS M V P+ TF +L
Sbjct: 481 DLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLA 540
Query: 282 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 341
ACS G+V+EG E+F M+ + I P +EHYG M+DL+GR GN A ++ MP P
Sbjct: 541 ACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTA 600
Query: 342 VIWRALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMM 398
IW +LL+A R H +AEFA I ++E +G +VLL NMY W + R++ +M
Sbjct: 601 RIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLM 660
Query: 399 KIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLE 439
+ G+ + +S +E H F D+SH I+ VL+
Sbjct: 661 ESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLD 701
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 148/287 (51%), Gaps = 12/287 (4%)
Query: 75 TYPSLVAAL--ISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKM 132
TYP ++ ++ IS+ + H V D + N +I MK G A KVF++M
Sbjct: 132 TYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEM 191
Query: 133 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 192
P RD+V+WN++I GY+ L LF+ ML +PD F+ S + C+ + + K
Sbjct: 192 PERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGK 251
Query: 193 WVHGLMLEKRVKL-NYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 251
+H + R++ + ++ +++DMY+K G + ++++F+ + + ++ WN MI A +
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARN 311
Query: 252 GLALDAIAVFSRMEVENVL-PDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQL 309
G DA F +M +N L PD IT + +L A + + EGR H M+ FL P +
Sbjct: 312 GRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFL--PHM 365
Query: 310 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
++D+ G G L+ A + M E +V+ W ++++A +GK
Sbjct: 366 VLETALIDMYGECGQLKSAEVIFDRM-AEKNVISWNSIIAAYVQNGK 411
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 135/263 (51%), Gaps = 11/263 (4%)
Query: 97 HHVFSRVM--DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFL 154
H V SR+ D +++ K GE A ++F+ M R++V WN +IG Y +N R
Sbjct: 256 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVT 315
Query: 155 DGLRLFRGMLSAE-VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAAL 213
D F+ M ++PD T +++ A+ + +HG + + + +L AL
Sbjct: 316 DAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETAL 371
Query: 214 VDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDS 273
+DMY +CG++ ++ +FD +A +V WN++I +G A+ +F + +++PDS
Sbjct: 372 IDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDS 431
Query: 274 ITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMI 332
T IL A + ++EGRE H I+++R+ + ++V + G+LE+A
Sbjct: 432 TTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII--LNSLVHMYAMCGDLEDARKCF 489
Query: 333 KAMPVEPDVVIWRALLSACRIHG 355
+ ++ DVV W +++ A +HG
Sbjct: 490 NHILLK-DVVSWNSIIMAYAVHG 511
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 114/233 (48%), Gaps = 3/233 (1%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
A ++FD+M D WN +I G+ +++ ++ + M+ A V+ D FT+ V+ A
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 244
+ +L K +H ++++ + + +L+ +Y K G +++VF+ + + WN+M
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 245 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRF 303
I+G G ++ +F M PD + + L ACSH G+E H + +++R
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR- 261
Query: 304 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
+ + +++D+ + G + A + M ++ ++V W ++ +G+
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIGCYARNGR 313
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 189/338 (55%), Gaps = 6/338 (1%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N +I K D A +F +P ++V++W ++I G N R + L R M ++
Sbjct: 437 NNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQ 495
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
P+ T + + CAR+GAL K +H +L V L+ L AL+DMY +CGR++ +
Sbjct: 496 PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQ 555
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 289
F++ +D V+ WN ++ G + G + +F RM V PD ITF+ +L CS +V
Sbjct: 556 FNSQKKD-VTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMV 614
Query: 290 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 349
+G +F+ M++ + + P L+HY +VDLLGRAG L+EA I+ MPV PD +W ALL+
Sbjct: 615 RQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLN 673
Query: 350 ACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKK 406
ACRIH K +L E + +I L+ G ++LL N+Y W +VR MMK G+
Sbjct: 674 ACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVD 733
Query: 407 RGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQR 444
G SW+E+ +H F + D+ H + K I+ VLEG ++
Sbjct: 734 AGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEK 771
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 167/370 (45%), Gaps = 35/370 (9%)
Query: 1 MNNETRTMLIKLQRLIHGAIKFGSLSE----SWSI----TQRSSHSLTDHSVFHRVLQRS 52
+ N M ++ L+ FG +SE SW++ + + ++HR+L
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 53 RASMDSTTAAKTHAKLIVHGYATYPSLVAAL--ISTYARCHQPHIAHHVFSRVMDTFSKN 110
D T+P ++ I AR + H+ + +D N
Sbjct: 191 GVKPD---------------VYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVN 235
Query: 111 LVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEP 170
+I +K G+ AR +FD+MP RD+++WN +I GY +N +GL LF M V+P
Sbjct: 236 ALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDP 295
Query: 171 DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF 230
D T SV++ C LG + +H ++ ++ + +L MY G ++++F
Sbjct: 296 DLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLF 355
Query: 231 DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVN 290
+ R + W MI+G + L AI + M+ ++V PD IT +L AC+ G ++
Sbjct: 356 SRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLD 415
Query: 291 EGREHFNIMQNRFLIQPQLEHY----GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 346
G E ++ I+ +L Y ++++ + +++A ++ +P +V+ W +
Sbjct: 416 TGVE-----LHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTS 469
Query: 347 LLSACRIHGK 356
+++ R++ +
Sbjct: 470 IIAGLRLNNR 479
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 128/251 (50%), Gaps = 6/251 (2%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N + + + AG A K+F +M +D+V+W T+I GY N + +R M V+
Sbjct: 336 NSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK 395
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
PD T A+V++ CA LG L +H L ++ R+ I++ L++MY+KC ID + +
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDI 455
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 289
F + R +V W ++I GL ++ +A+ +M++ + P++IT L AC+ G +
Sbjct: 456 FHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM-TLQPNAITLTAALAACARIGAL 514
Query: 290 NEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 348
G+E H ++++ + L + ++D+ R G + A + + + DV W LL
Sbjct: 515 MCGKEIHAHVLRTGVGLDDFLPN--ALLDMYVRCGRMNTAWSQFNSQ--KKDVTSWNILL 570
Query: 349 SACRIHGKKEL 359
+ G+ +
Sbjct: 571 TGYSERGQGSM 581
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 121/338 (35%), Positives = 187/338 (55%), Gaps = 7/338 (2%)
Query: 82 ALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVT 139
+I Y + A +FS + D S N+++ G ++AR F+K P + V+
Sbjct: 317 TMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS 376
Query: 140 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 199
WN++I Y KN + + + LF M +PD T S+++ L L +H +++
Sbjct: 377 WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVV 436
Query: 200 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNAMINGLAVHGLALDAI 258
K V + + AL+ MY++CG I S+++FD + + V WNAMI G A HG A +A+
Sbjct: 437 -KTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEAL 495
Query: 259 AVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDL 318
+F M+ + P ITFV +L AC+H GLV+E + F M + + I+PQ+EHY ++V++
Sbjct: 496 NLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNV 555
Query: 319 LGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE---SGDF 375
G EEA +I +MP EPD +W ALL ACRI+ LA A +SRLE S +
Sbjct: 556 TSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPY 615
Query: 376 VLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIE 413
VLL NMY + W A +VR M+ ++K+RG SW++
Sbjct: 616 VLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 126/306 (41%), Gaps = 69/306 (22%)
Query: 69 IVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDT------------FSKNLV---- 112
+V+ Y T LI Y + Q A +F ++ D F KN+V
Sbjct: 234 LVYAYNT-------LIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNS 286
Query: 113 -IESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 171
I++ +K G+ AR +FD+M RD ++WNT+I GYV R D LF M + D
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR----D 342
Query: 172 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 231
++ +V+G YA G +++++ F+
Sbjct: 343 AHSWNMMVSG-----------------------------------YASVGNVELARHYFE 367
Query: 232 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVN- 290
H WN++I + +A+ +F RM +E PD T +L A + GLVN
Sbjct: 368 KTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST--GLVNL 425
Query: 291 -EGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 349
G + I+ + P + + ++ + R G + E+ + M ++ +V+ W A++
Sbjct: 426 RLGMQMHQIVVKTVI--PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIG 483
Query: 350 ACRIHG 355
HG
Sbjct: 484 GYAFHG 489
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 107/255 (41%), Gaps = 65/255 (25%)
Query: 96 AHHVFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVK--NV 151
A +F ++ +T + N +I +K E + ARK+FD MP RDVVTWNT+I GYV +
Sbjct: 59 ARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGI 118
Query: 152 RFLDGLR-LFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS 210
RFL+ R LF M S D F++ ++++G
Sbjct: 119 RFLEEARKLFDEMPSR----DSFSWNTMISG----------------------------- 145
Query: 211 AALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL 270
YAK RI + +F+ + + W+AMI G +G A+ +F +M V++
Sbjct: 146 ------YAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSS 199
Query: 271 PDSITFVGILK---------ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGR 321
P G++K G + GRE + Y T++ G+
Sbjct: 200 PLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDL------------VYAYNTLIVGYGQ 247
Query: 322 AGNLEEACNMIKAMP 336
G +E A + +P
Sbjct: 248 RGQVEAARCLFDQIP 262
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 126/288 (43%), Gaps = 29/288 (10%)
Query: 82 ALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGECDIARKVFDKMPVRDVVT 139
+IS YA+ + A +F ++ + S + +I + GE D A +F KMPV+D
Sbjct: 141 TMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP 200
Query: 140 WNTLIGGYVKNVRFLDGLRLF--RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWV--- 194
L+ G +KN R + + G L + E + + +++ G + G + A+ +
Sbjct: 201 LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQ 260
Query: 195 --------HGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNAMI 245
HG +R N + +++ Y K G + ++ +FD + RD +S WN MI
Sbjct: 261 IPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTIS-WNTMI 319
Query: 246 NGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLI 305
+G DA A+FS M D+ ++ ++ + G V R +F + +
Sbjct: 320 DGYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTV 375
Query: 306 QPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE---PDVVIWRALLSA 350
+ +++ + + +EA ++ M +E PD +LLSA
Sbjct: 376 S-----WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSA 418
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 180/311 (57%), Gaps = 14/311 (4%)
Query: 112 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 171
+I+ K G+ AR +FD MP R +V+WN++I GY +N + L +F ML + PD
Sbjct: 257 LIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPD 316
Query: 172 GFTF-----ASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
TF AS++ GC++LG + +H + + + + ALV+MYAK G + +
Sbjct: 317 KVTFLSVIRASMIQGCSQLG-----QSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESA 371
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM-EVENVLPDSITFVGILKACSH 285
K+ F+ + + W +I GLA HG +A+++F RM E N PD IT++G+L ACSH
Sbjct: 372 KKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSH 431
Query: 286 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
GLV EG+ +F M++ ++P +EHYG MVD+L RAG EEA ++K MPV+P+V IW
Sbjct: 432 IGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWG 491
Query: 346 ALLSACRIHGKKELAE---FAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGG 402
ALL+ C IH EL + +A L SG +VLLSN+Y W + + +R MK
Sbjct: 492 ALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKR 551
Query: 403 VRKKRGKSWIE 413
V K G S +E
Sbjct: 552 VDKVLGHSSVE 562
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 138/296 (46%), Gaps = 18/296 (6%)
Query: 73 YATYPSLVAALIS----TYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKV 128
Y T+P ++ A + C + F ++ + ++ M GE + +V
Sbjct: 107 YFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFE--VNMYVSTCLLHMYMCCGEVNYGLRV 164
Query: 129 FDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGAL 188
F+ +P +VV W +LI G+V N RF D + FR M S V+ + ++ C R +
Sbjct: 165 FEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDI 224
Query: 189 CNAKWVHGLM--------LEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 240
KW HG + + +V N IL+ +L+DMYAKCG + ++ +FD + +
Sbjct: 225 VTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVS 284
Query: 241 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIM 299
WN++I G + +G A +A+ +F M + PD +TF+ +++A G G+ H +
Sbjct: 285 WNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVS 344
Query: 300 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
+ F+ + +V++ + G+ E A + + + D + W ++ HG
Sbjct: 345 KTGFVKDAAI--VCALVNMYAKTGDAESAKKAFEDLE-KKDTIAWTVVIIGLASHG 397
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 111/244 (45%), Gaps = 10/244 (4%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
AR VF+ + V WN++I GY + L ++ ML PD FTF V+ C+
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 244
L + VHG +++ ++N +S L+ MY CG ++ +VF+ + + +V W ++
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179
Query: 245 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 304
I+G + DAI F M+ V + V +L AC C + G+ +Q
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQG-LG 238
Query: 305 IQPQLEHY--------GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
P + +++D+ + G+L A + MP E +V W ++++ +G
Sbjct: 239 FDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMP-ERTLVSWNSIITGYSQNGD 297
Query: 357 KELA 360
E A
Sbjct: 298 AEEA 301
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 194 VHGLMLEKRVKLNYILSAALVDMYAKCGR---IDVSKQVFDTVARDHVSVWNAMINGLAV 250
+HGLM++ V N I + L+D C + ++ VF+++ V +WN+MI G +
Sbjct: 25 LHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSN 84
Query: 251 HGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
A+ + M + PD TF +LKACS
Sbjct: 85 SPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACS 118
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 138/426 (32%), Positives = 225/426 (52%), Gaps = 24/426 (5%)
Query: 44 VFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV 103
F V+ S S D + H + G A+ + +A+++ Y + A F
Sbjct: 95 TFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFD-- 152
Query: 104 MDTFSKNLV-----IESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLR 158
DT N+V I +K E + A +F MP R VVTWN +IGG+ + R + +
Sbjct: 153 -DTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVN 211
Query: 159 LFRGML-SAEVEPDGFTFASVVTGCARLGALCNAKWVHGL---MLEKRVKLNYILSAALV 214
F ML V P+ TF +T + + + K +H L KR N + +L+
Sbjct: 212 TFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKR--FNVFVWNSLI 269
Query: 215 DMYAKCGRIDVSKQVFDTVARDHVSV--WNAMINGLAVHGLALDAIAVFSRM-EVENVLP 271
Y+KCG ++ S F+ + + ++ WN+MI G A +G +A+A+F +M + N+ P
Sbjct: 270 SFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRP 329
Query: 272 DSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQP---QLEHYGTMVDLLGRAGNLEEA 328
+++T +G+L AC+H GL+ EG +FN N + P +LEHY MVD+L R+G +EA
Sbjct: 330 NNVTILGVLFACNHAGLIQEGYMYFNKAVNDY-DDPNLLELEHYACMVDMLSRSGRFKEA 388
Query: 329 CNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSL 385
+IK+MP++P + W+ALL C+IH K LA+ A + I L+ D +V+LSN Y ++
Sbjct: 389 EELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAM 448
Query: 386 KNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRA 445
+NW N +R MK G+++ G SWIE+ D I F AD+++ ++R+L + Q
Sbjct: 449 ENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHL 508
Query: 446 KFDGCF 451
+ + C+
Sbjct: 509 EENECW 514
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 129/304 (42%), Gaps = 45/304 (14%)
Query: 97 HHVFSRVMDTFSKNLVIESLMKAGECDIAR---KVFDKMPVRDVVTWNTLIGGYVKNVRF 153
+H + + T S N + E L+K + D+ R KVFD++P DV++ +IG +VK R
Sbjct: 16 YHSSANALVTKSPNSIPE-LVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRH 74
Query: 154 LDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAAL 213
++ + F+ +L + P+ FTF +V+ + K +H L+ + N + +A+
Sbjct: 75 VEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAV 134
Query: 214 VDMYAKCGRIDVSKQVFD-------------------------------TVARDHVSVWN 242
++ Y K + +++ FD + V WN
Sbjct: 135 LNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWN 194
Query: 243 AMINGLAVHGLALDAIAVFSRMEVEN-VLPDSITFVGILKACSHCGLVNEGRE----HFN 297
A+I G + G +A+ F M E V+P+ TF + A S+ G+
Sbjct: 195 AVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIK 254
Query: 298 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEP-DVVIWRALLSACRIHGK 356
+ RF + + +++ + GN+E++ + E ++V W +++ +G+
Sbjct: 255 FLGKRF----NVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGR 310
Query: 357 KELA 360
E A
Sbjct: 311 GEEA 314
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 218 bits (554), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 200/382 (52%), Gaps = 13/382 (3%)
Query: 41 DHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVF 100
D + +L+ + D H +LI G+ + ++ Y + A VF
Sbjct: 101 DEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVF 160
Query: 101 SRVMDTFSKNLVIESLMKAGECD---IARKV--FDKMPVRDVVTWNTLIGGYVKNVRFLD 155
+ + +N+V+ +LM G CD + R + F +M R +V+WN++I K R +
Sbjct: 161 DEMSE---RNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDRE 217
Query: 156 GLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYI-LSAALV 214
L LF M+ +PD T +V+ A LG L KW+H + ++I + ALV
Sbjct: 218 ALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALV 277
Query: 215 DMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM-EVENVLPDS 273
D Y K G ++ + +F + R +V WN +I+G AV+G I +F M E V P+
Sbjct: 278 DFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNE 337
Query: 274 ITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIK 333
TF+G+L CS+ G V G E F +M RF ++ + EHYG MVDL+ R+G + EA +K
Sbjct: 338 ATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLK 397
Query: 334 AMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHN 390
MPV + +W +LLSACR HG +LAE A + ++E SG++VLLSN+Y W +
Sbjct: 398 NMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQD 457
Query: 391 AERVRNMMKIGGVRKKRGKSWI 412
E+VR +MK +RK G+S I
Sbjct: 458 VEKVRTLMKKNRLRKSTGQSTI 479
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 117/269 (43%), Gaps = 32/269 (11%)
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
D A +VF + +V+ +N +I Y L+ L F M S + D +T+A ++ C
Sbjct: 53 DYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSC 112
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 242
+ L L K VHG ++ + +V++Y GR+ +++VFD ++ +V VWN
Sbjct: 113 SSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWN 172
Query: 243 AMING-------------------------------LAVHGLALDAIAVFSRMEVENVLP 271
MI G L+ G +A+ +F M + P
Sbjct: 173 LMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDP 232
Query: 272 DSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM 331
D T V +L + G+++ G+ + ++ L + + +VD ++G+LE A +
Sbjct: 233 DEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAI 292
Query: 332 IKAMPVEPDVVIWRALLSACRIHGKKELA 360
+ M +VV W L+S ++GK E
Sbjct: 293 FRKMQ-RRNVVSWNTLISGSAVNGKGEFG 320
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/388 (32%), Positives = 195/388 (50%), Gaps = 13/388 (3%)
Query: 65 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFS--RVMDTFSKNLVIESLMKAGEC 122
HA ++ +G+++ +++S Y + A V+ S N +I++ MK GE
Sbjct: 228 HAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGET 287
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
+ A +VF P +++VTW T+I GY +N LR F M+ + V+ D F + +V+ C
Sbjct: 288 EKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHAC 347
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 242
+ L L + K +HG ++ + + ALV++YAKCG I + + F +A + WN
Sbjct: 348 SGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWN 407
Query: 243 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 302
M+ VHGLA A+ ++ M + PD++TF+G+L CSH GLV EG F M
Sbjct: 408 TMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKD 467
Query: 303 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV----EPDVVIWRALLSACRIHGKKE 358
+ I +++H M+D+ GR G+L EA ++ + W LL AC H E
Sbjct: 468 YRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTE 527
Query: 359 LAE-----FAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIE 413
L IA S E FVLLSN+YCS W E VR M G++K G SWIE
Sbjct: 528 LGREVSKVLKIAEPS--EEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIE 585
Query: 414 LGDSIHQFNAADQSHAEMKAIHRVLEGL 441
+G+ + F D SH ++ + L L
Sbjct: 586 VGNQVSTFVVGDSSHPRLEELSETLNCL 613
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 149/368 (40%), Gaps = 48/368 (13%)
Query: 34 RSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQP 93
R S + D F +L + + K + +I G+ + +LI Y +C
Sbjct: 62 RFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDT 121
Query: 94 HIAHHVFSRVMDTFSKNLV-----IESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYV 148
A+ VF R M S+N V + + M A + + A VF +MP R WN +I G+
Sbjct: 122 LSANKVF-RDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHA 180
Query: 149 KNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC-ARLGALCNAKWVHGLMLEKRVKL-- 205
+ L LF+ ML +E +PD +TF+S++ C A + + VH +ML+
Sbjct: 181 HCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAV 240
Query: 206 ---NYILS--------------------------AALVDMYAKCGRIDVSKQVFDTVARD 236
N +LS +++D K G + + +VF
Sbjct: 241 EAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEK 300
Query: 237 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 296
++ W MI G +G A+ F M V D + +L ACS L+ G+
Sbjct: 301 NIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGK--- 357
Query: 297 NIMQNRFLIQPQLEHYG----TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACR 352
M + LI + Y +V+L + G+++EA + D+V W +L A
Sbjct: 358 --MIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDI-ANKDLVSWNTMLFAFG 414
Query: 353 IHGKKELA 360
+HG + A
Sbjct: 415 VHGLADQA 422
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 129/283 (45%), Gaps = 38/283 (13%)
Query: 113 IESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDG 172
I SL K+G AR+VFD MP D V WNT++ Y + + + LF + ++ +PD
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 173 FTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDT 232
++F ++++ CA LG + + + L++ + ++ +L+DMY KC + +VF
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 233 V---ARDHVS------------------------------VWNAMINGLAVHGLALDAIA 259
+ +R+ V+ WN MI+G A G ++
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLS 190
Query: 260 VFSRMEVENVLPDSITFVGILKACS-HCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVD 317
+F M PD TF ++ ACS V GR H +++N + +E +++
Sbjct: 191 LFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGW--SSAVEAKNSVLS 248
Query: 318 LLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
+ G+ ++A ++++ V V W +++ AC G+ E A
Sbjct: 249 FYTKLGSRDDAMRELESIEVLTQVS-WNSIIDACMKIGETEKA 290
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/344 (34%), Positives = 184/344 (53%), Gaps = 32/344 (9%)
Query: 79 LVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVV 138
+V+ LI+ Y+ C + I+ +F ++ D+
Sbjct: 453 IVSGLIAVYSECEKMEISECIFDDCINEL----------------------------DIA 484
Query: 139 TWNTLIGGYVKNVRFLDGLRLFRGM-LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGL 197
WN++I G+ N+ L LFR M +A + P+ +FA+V++ C+RL +L + + HGL
Sbjct: 485 CWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGL 544
Query: 198 MLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDA 257
+++ + + AL DMY KCG ID ++Q FD V R + +WN MI+G +G +A
Sbjct: 545 VVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEA 604
Query: 258 IAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVD 317
+ ++ +M PD ITFV +L ACSH GLV G E + MQ I+P+L+HY +VD
Sbjct: 605 VGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVD 664
Query: 318 LLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE---SGD 374
LGRAG LE+A + +A P + V+W LLS+CR+HG LA + RL+ S
Sbjct: 665 CLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAA 724
Query: 375 FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSI 418
+VLLSN Y SL+ W ++ ++ +M V K G+SW G+ +
Sbjct: 725 YVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGNDL 768
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 130/247 (52%), Gaps = 11/247 (4%)
Query: 112 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 171
V+ + ++G+ + R++F +P V WN ++ GY + + + FR M ++PD
Sbjct: 356 VLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPD 415
Query: 172 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 231
T + +++ CARL L K +HG+++ + N + + L+ +Y++C ++++S+ +FD
Sbjct: 416 KTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFD 475
Query: 232 TVARD-HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL-PDSITFVGILKACSH-CGL 288
+ ++ WN+MI+G + L A+ +F RM VL P+ +F +L +CS C L
Sbjct: 476 DCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSL 535
Query: 289 VNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 348
++ + H ++++ ++ +E + D+ + G ++ A A+ + + VIW +
Sbjct: 536 LHGRQFHGLVVKSGYVSDSFVET--ALTDMYCKCGEIDSARQFFDAV-LRKNTVIWNEM- 591
Query: 349 SACRIHG 355
IHG
Sbjct: 592 ----IHG 594
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 148/322 (45%), Gaps = 15/322 (4%)
Query: 65 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAGEC 122
H ++ G + L L+ Y C A VF V D +S N + K G+
Sbjct: 29 HGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDL 88
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
A +VFD MP RDVV+WN +I V+ L +++ M+ P FT ASV++ C
Sbjct: 89 GEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSAC 148
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI-DVSKQVFDTVARDHVSVW 241
+++ HG+ ++ + N + AL+ MYAKCG I D +VF+++++ + +
Sbjct: 149 SKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSY 208
Query: 242 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL------KACSHCGLV--NEGR 293
A+I GLA L+A+ +F M + V DS+ IL + C + NE
Sbjct: 209 TAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELG 268
Query: 294 EHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRI 353
+ + + R L +++++ + ++ A + MP E +VV W ++
Sbjct: 269 KQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMP-EVNVVSWNIMIVG--- 324
Query: 354 HGKKELAEFAIANISRLESGDF 375
G++ ++ ++ ++R+ F
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGF 346
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 122/276 (44%), Gaps = 21/276 (7%)
Query: 89 RCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGE-CDIARKVFDKMPVRDVVTWNTLIGGY 147
RCH + + + F N ++ K G D +VF+ + + V++ +IGG
Sbjct: 159 RCHGVAVKTGLDKNI---FVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGL 215
Query: 148 VKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT------GCARLGALCN---AKWVHGLM 198
+ + L+ +++FR M V+ D +++++ GC L + K +H L
Sbjct: 216 ARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLA 275
Query: 199 LEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAI 258
L + L+ +L+++YAK ++ ++ +F + +V WN MI G + ++
Sbjct: 276 LRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSV 335
Query: 259 AVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDL 318
+RM P+ +T + +L AC G V GR F+ + QP + + M+
Sbjct: 336 EFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP-----QPSVSAWNAMLSG 390
Query: 319 LGRAGNLEEACNMIKAMP---VEPDVVIWRALLSAC 351
+ EEA + + M ++PD +LS+C
Sbjct: 391 YSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 43/196 (21%)
Query: 65 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDI 124
H ++ GY + + AL Y +C GE D
Sbjct: 542 HGLVVKSGYVSDSFVETALTDMYCKC-----------------------------GEIDS 572
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
AR+ FD + ++ V WN +I GY N R + + L+R M+S+ +PDG TF SV+T C+
Sbjct: 573 ARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSH 632
Query: 185 LG-------ALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 237
G L + + +HG+ E +YI +VD + GR++ ++++ +
Sbjct: 633 SGLVETGLEILSSMQRIHGIEPELD---HYI---CIVDCLGRAGRLEDAEKLAEATPYKS 686
Query: 238 VSV-WNAMINGLAVHG 252
SV W +++ VHG
Sbjct: 687 SSVLWEILLSSCRVHG 702
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 102/248 (41%), Gaps = 36/248 (14%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D N ++E K + + A +F +MP +VV+WN +I G+ + R + M
Sbjct: 283 DLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMR 342
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
+ +P+ T SV+ C R G ++
Sbjct: 343 DSGFQPNEVTCISVLGACFR-----------------------------------SGDVE 367
Query: 225 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
+++F ++ + VS WNAM++G + + +AI+ F +M+ +N+ PD T IL +C+
Sbjct: 368 TGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCA 427
Query: 285 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 344
+ G++ ++ R I ++ + +E + + E D+ W
Sbjct: 428 RLRFLEGGKQIHGVVI-RTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACW 486
Query: 345 RALLSACR 352
+++S R
Sbjct: 487 NSMISGFR 494
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 199/363 (54%), Gaps = 5/363 (1%)
Query: 82 ALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVT 139
+LI+ + Q A+ +F ++ D S +I+ GE ++F MP +D +T
Sbjct: 346 SLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT 405
Query: 140 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 199
W +I +V N + + L F ML EV P+ +TF+SV++ A L L +HG ++
Sbjct: 406 WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVV 465
Query: 200 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIA 259
+ + + + +LV MY KCG + + ++F ++ ++ +N MI+G + +G A+
Sbjct: 466 KMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALK 525
Query: 260 VFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLL 319
+FS +E P+ +TF+ +L AC H G V+ G ++F M++ + I+P +HY MVDLL
Sbjct: 526 LFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLL 585
Query: 320 GRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE---SGDFV 376
GR+G L++A N+I MP +P +W +LLSA + H + +LAE A + LE + +V
Sbjct: 586 GRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYV 645
Query: 377 LLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHR 436
+LS +Y + + +R+ N+ K ++K G SWI L +H F A D+S ++ I
Sbjct: 646 VLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGF 705
Query: 437 VLE 439
L+
Sbjct: 706 TLK 708
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 147/328 (44%), Gaps = 31/328 (9%)
Query: 83 LISTYARCHQPHIAHHVFS--RVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTW 140
L+S Y R + + A VF V + S + ++ K G AR +FD+M R+V+TW
Sbjct: 183 LLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITW 242
Query: 141 NTLIGGYVKNVRFLDGLRLF-RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 199
+I GY K F DG LF R +V+ + T A + C +HGL+
Sbjct: 243 TAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVS 302
Query: 200 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIA 259
++ + L +L+ MY+K G + +K VF + WN++I GL +A
Sbjct: 303 RMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYE 362
Query: 260 VFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLL 319
+F +M + D +++ ++K S G +++ E F +M + I + M+
Sbjct: 363 LFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT-----WTAMISAF 413
Query: 320 GRAGNLEEA-CNMIKAMPVE--PDVVIWRALLSAC----------RIHGKKELAEFAIAN 366
G EEA C K + E P+ + ++LSA +IHG+ + + I N
Sbjct: 414 VSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGR--VVKMNIVN 471
Query: 367 ISRLESGDFVLLSNMYCSLKNWHNAERV 394
+++ L +MYC N ++A ++
Sbjct: 472 DLSVQNS----LVSMYCKCGNTNDAYKI 495
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 145/331 (43%), Gaps = 42/331 (12%)
Query: 84 ISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWN 141
IS +AR A +F ++ + S +I + + G+ A +VFD+MPVR ++N
Sbjct: 57 ISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYN 116
Query: 142 TLIGGYVKNVRFL-DGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHG---L 197
+I +KN L LF + E + ++A+++TG R G A++++ +
Sbjct: 117 AMITAMIKNKCDLGKAYELFCDI----PEKNAVSYATMITGFVRAGRFDEAEFLYAETPV 172
Query: 198 MLEKRVKLNYILS--------------------------AALVDMYAKCGRIDVSKQVFD 231
V N +LS +++V Y K GRI ++ +FD
Sbjct: 173 KFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFD 232
Query: 232 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKACSHCGLVN 290
+ +V W AMI+G G D +F RM E +V +S T + KAC
Sbjct: 233 RMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYR 292
Query: 291 EGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
EG + ++ +R ++ L +++ + + G + EA + M D V W +L++
Sbjct: 293 EGSQIHGLV-SRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK-NKDSVSWNSLITG 350
Query: 351 CRIHGKKELAEFAIANISRLESGDFVLLSNM 381
+ +K+++E A ++ D V ++M
Sbjct: 351 --LVQRKQISE-AYELFEKMPGKDMVSWTDM 378
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 179/342 (52%), Gaps = 3/342 (0%)
Query: 103 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
V++ F + +I+ K G ++A KVF M ++V WN++I Y +N + LF
Sbjct: 508 VLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNL 567
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
MLS + PD + SV+ + +L K +HG L + + L AL+DMY KCG
Sbjct: 568 MLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGF 627
Query: 223 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
++ +F + + WN MI G HG + A+++F M+ PD +TF+ ++ A
Sbjct: 628 SKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISA 687
Query: 283 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 342
C+H G V EG+ F M+ + I+P +EHY MVDLLGRAG LEEA + IKAMP+E D
Sbjct: 688 CNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSS 747
Query: 343 IWRALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMK 399
IW LLSA R H EL + + R+E +V L N+Y + A ++ +MK
Sbjct: 748 IWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMK 807
Query: 400 IGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGL 441
G+ K+ G SWIE+ D + F + S I VL L
Sbjct: 808 EKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRL 849
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 136/289 (47%), Gaps = 16/289 (5%)
Query: 75 TYPSLVAAL--ISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDK- 131
T+PSL+ A ++ + H + V D F ++ +K G D A +VFD
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 132 ------MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARL 185
+ RDV WN++I GY K RF +G+ FR ML V PD F+ + VV+ +
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 186 GAL--CNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG-RIDVSKQVFDTVARDHVSVWN 242
G K +HG ML + + L AL+DMY K G ID + + + +V +WN
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 243 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQN 301
MI G G+ ++ ++ + +V S +F G L ACS GR+ H ++++
Sbjct: 242 VMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKM 301
Query: 302 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
P + +++ + + G + EA + + V+ + IW A+++A
Sbjct: 302 GLHNDPYV--CTSLLSMYSKCGMVGEAETVFSCV-VDKRLEIWNAMVAA 347
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 144/323 (44%), Gaps = 38/323 (11%)
Query: 45 FHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM 104
F L S +S + H ++ G P + +L+S Y++C A VFS V+
Sbjct: 275 FTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVV 334
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D K L I WN ++ Y +N L LF M
Sbjct: 335 D---KRLEI--------------------------WNAMVAAYAENDYGYSALDLFGFMR 365
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
V PD FT ++V++ C+ LG K VH + ++ ++ + +AL+ +Y+KCG
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDP 425
Query: 225 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM--EVENVLPDSITFVGILKA 282
+ VF ++ + W ++I+GL +G +A+ VF M + +++ PDS + A
Sbjct: 426 DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNA 485
Query: 283 CSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 341
C+ + G + H ++++ ++ + +++DL + G E A + +M E ++
Sbjct: 486 CAGLEALRFGLQVHGSMIKTGLVLNVFVG--SSLIDLYSKCGLPEMALKVFTSMSTE-NM 542
Query: 342 VIWRALLSACRIHGKKELAEFAI 364
V W +++S + + L E +I
Sbjct: 543 VAWNSMISC---YSRNNLPELSI 562
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 14/187 (7%)
Query: 173 FTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD- 231
FTF S++ C+ L L K +HG ++ + + ++ +LV+MY KCG +D + QVFD
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 232 -------TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
ARD V+VWN+MI+G + + F RM V V PD+ + ++
Sbjct: 121 WSQSQSGVSARD-VTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMC 179
Query: 285 HCGLV--NEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 341
G EG++ H +++N L+ ++D+ + G +A + + + +V
Sbjct: 180 KEGNFRREEGKQIHGFMLRNSLDTDSFLKT--ALIDMYFKFGLSIDAWRVFVEIEDKSNV 237
Query: 342 VIWRALL 348
V+W ++
Sbjct: 238 VLWNVMI 244
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 185/331 (55%), Gaps = 3/331 (0%)
Query: 112 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 171
+++ +K G ARK FD++ + +++W++LI GY + F++ + LF+ + + D
Sbjct: 253 LVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQID 312
Query: 172 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 231
F +S++ A L K + L ++ L + ++VDMY KCG +D +++ F
Sbjct: 313 SFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFA 372
Query: 232 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 291
+ V W +I G HGL ++ +F M N+ PD + ++ +L ACSH G++ E
Sbjct: 373 EMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKE 432
Query: 292 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 351
G E F+ + I+P++EHY +VDLLGRAG L+EA ++I MP++P+V IW+ LLS C
Sbjct: 433 GEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLC 492
Query: 352 RIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRG 408
R+HG EL + + R+++ ++V++SN+Y W+ R + I G++K+ G
Sbjct: 493 RVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAG 552
Query: 409 KSWIELGDSIHQFNAADQSHAEMKAIHRVLE 439
SW+E+ +H F + + SH I L+
Sbjct: 553 MSWVEIEREVHFFRSGEDSHPLTPVIQETLK 583
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 131/251 (52%), Gaps = 10/251 (3%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
++ + N +I+ K E +A KVFD MP R+VV+W+ L+ G+V N L LF M
Sbjct: 39 LNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM 98
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
+ P+ FTF++ + C L AL +HG L+ ++ + +LVDMY+KCGRI
Sbjct: 99 GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 158
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENV--LPDSITFVGILK 281
+ +++VF + + WNAMI G G A+ F M+ N+ PD T +LK
Sbjct: 159 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 218
Query: 282 ACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNL---EEACNMIKAMPV 337
ACS G++ G++ H ++++ F G++VDL + G L +A + IK
Sbjct: 219 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK---- 274
Query: 338 EPDVVIWRALL 348
E ++ W +L+
Sbjct: 275 EKTMISWSSLI 285
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 124/253 (49%), Gaps = 12/253 (4%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N +++ K G + A KVF ++ R +++WN +I G+V L F M A ++
Sbjct: 146 NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK 205
Query: 170 --PDGFTFASVVTGCARLGALCNAKWVHGLMLEK--RVKLNYILSAALVDMYAKCGRIDV 225
PD FT S++ C+ G + K +HG ++ + ++ +LVD+Y KCG +
Sbjct: 206 ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFS 265
Query: 226 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 285
+++ FD + + W+++I G A G ++A+ +F R++ N DS I+ +
Sbjct: 266 ARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFAD 325
Query: 286 CGLVNEGREHFNIMQNRFLIQP---QLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 342
L+ +G++ MQ + P + ++VD+ + G ++EA M ++ DV+
Sbjct: 326 FALLRQGKQ----MQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLK-DVI 380
Query: 343 IWRALLSACRIHG 355
W +++ HG
Sbjct: 381 SWTVVITGYGKHG 393
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 89/170 (52%), Gaps = 5/170 (2%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
++T N V++ +K G D A K F +M ++DV++W +I GY K+ +R+F M
Sbjct: 346 LETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEM 405
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKR-VKLNYILSAALVDMYAKCGR 222
L +EPD + +V++ C+ G + + + +LE +K A +VD+ + GR
Sbjct: 406 LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGR 465
Query: 223 IDVSKQVFDTVA-RDHVSVWNAMINGLAVHG---LALDAIAVFSRMEVEN 268
+ +K + DT+ + +V +W +++ VHG L + + R++ +N
Sbjct: 466 LKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKN 515
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 174 TFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV 233
S++ C R G VH +L+ LN I S L+DMY KC ++ +VFD++
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 234 ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR 293
+V W+A+++G ++G ++++FS M + + P+ TF LKA CGL+N
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKA---CGLLNALE 124
Query: 294 EHFNI--MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 351
+ I + + +E ++VD+ + G + EA + + + V+ ++ W A+++
Sbjct: 125 KGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMIAGF 183
Query: 352 RIH---GKKELAEFAI---ANISRLESGDFVLLS 379
+H G K L F + ANI +F L S
Sbjct: 184 -VHAGYGSKALDTFGMMQEANIKE-RPDEFTLTS 215
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 118/349 (33%), Positives = 184/349 (52%), Gaps = 7/349 (2%)
Query: 108 SKNLVIESLM----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
S ++ SLM K G D AR +FDK+ +DVV+W ++I Y K+ R+ +G LF +
Sbjct: 251 SDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSEL 310
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
+ + P+ +TFA V+ CA L K VHG M S++LVDMY KCG I
Sbjct: 311 VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNI 370
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
+ +K V D + + W ++I G A +G +A+ F + PD +TFV +L AC
Sbjct: 371 ESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSAC 430
Query: 284 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 343
+H GLV +G E F + + + +HY +VDLL R+G E+ ++I MP++P +
Sbjct: 431 THAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFL 490
Query: 344 WRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKI 400
W ++L C +G +LAE A + ++E + +V ++N+Y + W ++R M+
Sbjct: 491 WASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQE 550
Query: 401 GGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
GV K+ G SW E+ H F AAD SH I L L ++ K +G
Sbjct: 551 IGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEG 599
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 150/321 (46%), Gaps = 5/321 (1%)
Query: 43 SVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR 102
S + ++Q + K H + G+ + L+ YA+C A VF
Sbjct: 86 STYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDE 145
Query: 103 V--MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLF 160
+ D S N+++ + G + ARK+FD+M +D +W ++ GYVK + + L L+
Sbjct: 146 MPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLY 205
Query: 161 RGMLS-AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK 219
M P+ FT + V A + + K +HG ++ + + +L ++L+DMY K
Sbjct: 206 SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK 265
Query: 220 CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGI 279
CG ID ++ +FD + V W +MI+ + ++FS + P+ TF G+
Sbjct: 266 CGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGV 325
Query: 280 LKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEP 339
L AC+ G++ M R P ++VD+ + GN+E A +++ P +P
Sbjct: 326 LNACADLTTEELGKQVHGYM-TRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-KP 383
Query: 340 DVVIWRALLSACRIHGKKELA 360
D+V W +L+ C +G+ + A
Sbjct: 384 DLVSWTSLIGGCAQNGQPDEA 404
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 89/177 (50%), Gaps = 9/177 (5%)
Query: 106 TFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 165
+F+ + +++ K G + A+ V D P D+V+W +LIGG +N + + L+ F +L
Sbjct: 354 SFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLK 413
Query: 166 AEVEPDGFTFASVVTGCARLGALCNA-KWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
+ +PD TF +V++ C G + ++ + + + R+ LVD+ A+ GR +
Sbjct: 414 SGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFE 473
Query: 225 VSKQVFDTVA-RDHVSVWNAMINGLAVHG---LALDAIAVFSRMEVENVLPDSITFV 277
K V + + +W +++ G + +G LA +A ++E EN +T+V
Sbjct: 474 QLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPEN----PVTYV 526
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/373 (34%), Positives = 206/373 (55%), Gaps = 15/373 (4%)
Query: 92 QPHIAHHVFSRV-MDTFSKNLVIESLM-----KAGECDIARKVFDKM--PVRDVVTWNTL 143
+ I ++ +R+ + +N+V+ S + K + + AR+VFD M R+VV+W ++
Sbjct: 146 ESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSM 205
Query: 144 IGGYVKNVRFLDGLRLFRGMLSAEVE--PDGFTFASVVTGCARLGALCNAKWVHGLMLEK 201
I Y +N R + + LFR +A + F ASV++ C+ LG L K HGL+
Sbjct: 206 ITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRG 265
Query: 202 RVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVF 261
+ N +++ +L+DMYAKCG + ++++F + V + +MI A HGL A+ +F
Sbjct: 266 GYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLF 325
Query: 262 SRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGR 321
M + P+ +T +G+L ACSH GLVNEG E+ ++M ++ + P HY +VD+LGR
Sbjct: 326 DEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGR 385
Query: 322 AGNLEEACNMIKAMPV--EPDVVIWRALLSACRIHGKKELAEFA---IANISRLESGDFV 376
G ++EA + K + V E ++W ALLSA R+HG+ E+ A + ++ + ++
Sbjct: 386 FGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYI 445
Query: 377 LLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHR 436
LSN Y W ++E +R MK G K+R SWIE DS++ F+A D S E I R
Sbjct: 446 ALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIER 505
Query: 437 VLEGLIQRAKFDG 449
L+ L +R K G
Sbjct: 506 FLKDLEKRMKERG 518
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 105/195 (53%), Gaps = 7/195 (3%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM- 163
DTF+ N ++ S +K E + ARK+FD+M +VV+W ++I GY + + L +F+ M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
V P+ +TFASV C+ L K +H + ++ N ++S++LVDMY KC +
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 224 DVSKQVFDTV---ARDHVSVWNAMINGLAVHGLALDAIAVFSRME--VENVLPDSITFVG 278
+ +++VFD++ R+ VS W +MI A + +AI +F + + +
Sbjct: 183 ETARRVFDSMIGYGRNVVS-WTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLAS 241
Query: 279 ILKACSHCGLVNEGR 293
++ ACS G + G+
Sbjct: 242 VISACSSLGRLQWGK 256
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 195/359 (54%), Gaps = 5/359 (1%)
Query: 60 TAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLM 117
T + H G + + L+ Y++C P A +FS V DT N +I+
Sbjct: 336 TGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYF 395
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
G D A++VF+++ + +++WN++ G+ +N ++ L F M ++ D + +S
Sbjct: 396 SCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSS 455
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 237
V++ CA + +L + V + + ++S++L+D+Y KCG ++ ++VFDT+ +
Sbjct: 456 VISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSD 515
Query: 238 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 297
WN+MI+G A +G +AI +F +M V + P ITF+ +L AC++CGLV EGR+ F
Sbjct: 516 EVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFE 575
Query: 298 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 357
M+ P EH+ MVDLL RAG +EEA N+++ MP + D +W ++L C +G K
Sbjct: 576 SMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYK 635
Query: 358 ELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIE 413
+ + A I LE + +V LS ++ + +W ++ VR +M+ V K G SW +
Sbjct: 636 AMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 176/382 (46%), Gaps = 39/382 (10%)
Query: 9 LIKLQRLIHGAIKFGSLSESWSITQRSSHSLTDHSVFHRVLQRSRASMDSTTAAKT-HAK 67
++ L L+HG I G E+ + + + S D VL ++ A +++ K HA+
Sbjct: 155 VVTLNSLLHGYILNGYAEEALRLFKELNFS-ADAITLTTVL-KACAELEALKCGKQIHAQ 212
Query: 68 LIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGECDIA 125
+++ G + ++L++ YA+C +A ++ ++ D S + +I G + +
Sbjct: 213 ILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNES 272
Query: 126 RKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARL 185
R +FD+ R V+ WN++I GY+ N ++ L LF M + E D T A+V+ C L
Sbjct: 273 RGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN-ETREDSRTLAAVINACIGL 331
Query: 186 GALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK-------------------------- 219
G L K +H + + + ++++ L+DMY+K
Sbjct: 332 GFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMI 391
Query: 220 -----CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSI 274
CGRID +K+VF+ + + WN+M NG + +G ++ + F +M ++ D +
Sbjct: 392 KVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEV 451
Query: 275 TFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKA 334
+ ++ AC+ + G + F L Q+ +++DL + G +E +
Sbjct: 452 SLSSVISACASISSLELGEQVFARATIVGLDSDQVVS-SSLIDLYCKCGFVEHGRRVFDT 510
Query: 335 MPVEPDVVIWRALLSACRIHGK 356
M V+ D V W +++S +G+
Sbjct: 511 M-VKSDEVPWNSMISGYATNGQ 531
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 170/385 (44%), Gaps = 73/385 (18%)
Query: 45 FHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAA-LISTYARCHQPHIAHHVFSRV 103
+ R+LQ + T +T+ L+ G+ + +VA L+ Y+R + IA ++F +
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 104 ---------------------------------MDTFSKNLVIESLMKAGECDIARKVFD 130
D +S N+V+ KAGE +AR++F+
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFN 148
Query: 131 KMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCN 190
MP +DVVT N+L+ GY+ N + LRLF+ + D T +V+ CA L AL
Sbjct: 149 AMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKC 205
Query: 191 AKWVHGLMLEKRVKLNYILSAALVDMYAK------------------------------- 219
K +H +L V+ + ++++LV++YAK
Sbjct: 206 GKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYAN 265
Query: 220 CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGI 279
CGR++ S+ +FD + V +WN+MI+G + + ++A+ +F+ M E DS T +
Sbjct: 266 CGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTLAAV 324
Query: 280 LKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEP 339
+ AC G + G++ + +F + + T++D+ + G+ EAC + +
Sbjct: 325 INACIGLGFLETGKQ-MHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYD 383
Query: 340 DVVI---WRALLSACRIHGKKELAE 361
+++ + S RI K + E
Sbjct: 384 TILLNSMIKVYFSCGRIDDAKRVFE 408
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 176/320 (55%), Gaps = 13/320 (4%)
Query: 103 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
+ DT N ++ K + A+ VF+ +D+V WN++I G+ +N + L LF
Sbjct: 374 IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHR 433
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSA------ALVDM 216
M S V P+G T AS+ + CA LG+L +H VKL ++ S+ AL+D
Sbjct: 434 MNSESVTPNGVTVASLFSACASLGSLAVGSSLHAY----SVKLGFLASSSVHVGTALLDF 489
Query: 217 YAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
YAKCG ++ +FDT+ + W+AMI G G + ++ +F M + P+ TF
Sbjct: 490 YAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTF 549
Query: 277 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP 336
IL AC H G+VNEG+++F+ M + P +HY MVD+L RAG LE+A ++I+ MP
Sbjct: 550 TSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMP 609
Query: 337 VEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAER 393
++PDV + A L C +H + +L E I + L D +VL+SN+Y S W+ A+
Sbjct: 610 IQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKE 669
Query: 394 VRNMMKIGGVRKKRGKSWIE 413
VRN+MK G+ K G S +E
Sbjct: 670 VRNLMKQRGLSKIAGHSTME 689
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 138/262 (52%), Gaps = 17/262 (6%)
Query: 110 NLVIESLM----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 165
N+V+ L+ K GE A KVF+ + +R+VV W ++I GYVKN +GL LF M
Sbjct: 176 NVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRE 235
Query: 166 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 225
V + +T+ +++ C +L AL KW HG +++ ++L+ L +L+DMY KCG I
Sbjct: 236 NNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISN 295
Query: 226 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 285
+++VF+ + + +W AMI G +G +A+++F +M+ + P+ +T +L S
Sbjct: 296 ARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVL---SG 352
Query: 286 CGLVNEGREHFNIMQNRFLIQPQLEHYGT-----MVDLLGRAGNLEEACNMIKAMPVEPD 340
CGL+ E+ + ++ + ++ + T +V + + +A + M E D
Sbjct: 353 CGLI----ENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDA-KYVFEMESEKD 407
Query: 341 VVIWRALLSACRIHGKKELAEF 362
+V W +++S +G A F
Sbjct: 408 IVAWNSIISGFSQNGSIHEALF 429
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 112/225 (49%), Gaps = 5/225 (2%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
AR VFD++P D W ++ Y N ++ ++L+ ++ D F+ + C
Sbjct: 95 ARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTE 154
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 244
L L N K +H L K + ++ L+DMYAKCG I + +VF+ + +V W +M
Sbjct: 155 LQDLDNGKKIH-CQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSM 213
Query: 245 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR-EHFNIMQNRF 303
I G + L + + +F+RM NVL + T+ ++ AC+ +++G+ H ++++
Sbjct: 214 IAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGI 273
Query: 304 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 348
+ L +++D+ + G++ A + D+V+W A++
Sbjct: 274 ELSSCL--VTSLLDMYVKCGDISNARRVFNEHS-HVDLVMWTAMI 315
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 189/337 (56%), Gaps = 4/337 (1%)
Query: 117 MKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 176
M+ G+ V MPVR++V WNTLI G +N L L++ M + P+ TF
Sbjct: 137 MRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFV 196
Query: 177 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 236
+V++ C+ L + +H ++ + ++L+ MY+KCG + + + F +
Sbjct: 197 TVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDE 256
Query: 237 HVSVWNAMINGLAVHGLALDAIAVFSRM-EVENVLPDSITFVGILKACSHCGLVNEGREH 295
+W++MI+ HG +AI +F+ M E N+ + + F+ +L ACSH GL ++G E
Sbjct: 257 DEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLEL 316
Query: 296 FNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
F++M ++ +P L+HY +VDLLGRAG L++A +I++MP++ D+VIW+ LLSAC IH
Sbjct: 317 FDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHK 376
Query: 356 KKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWI 412
E+A+ I +++ D +VLL+N++ S K W + VR M+ V+K+ G SW
Sbjct: 377 NAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWF 436
Query: 413 ELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
E +HQF D+S ++ K I+ L+ L K G
Sbjct: 437 EHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKG 473
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 156/307 (50%), Gaps = 8/307 (2%)
Query: 84 ISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWN 141
+S Y++ A V+ R+ + S N++I ++AG+ ARKVFD+MP R + TWN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 142 TLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEK 201
+I G ++ +GL LFR M PD +T SV +G A L ++ + +HG ++
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 202 RVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVF 261
++L+ +++++L MY + G++ + V ++ ++ WN +I G A +G + ++
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 262 SRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGR 321
M++ P+ ITFV +L +CS + +G++ + + + +++ + +
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQ-IHAEAIKIGASSVVAVVSSLISMYSK 239
Query: 322 AGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK-KELAEF--AIANISRLESGDFVLL 378
G L +A E D V+W +++SA HG+ E E +A + +E + L
Sbjct: 240 CGCLGDAAKAFSEREDE-DEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFL 298
Query: 379 SNMY-CS 384
+ +Y CS
Sbjct: 299 NLLYACS 305
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 193/349 (55%), Gaps = 5/349 (1%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D KN +I K G+ ++ +F+ + R+++TWN ++ + + L+L M
Sbjct: 498 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 557
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI- 223
S V D F+F+ ++ A+L L + +HGL ++ + + + A DMY+KCG I
Sbjct: 558 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 617
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
+V K + +V R S WN +I+ L HG + A F M + P +TFV +L AC
Sbjct: 618 EVVKMLPPSVNRSLPS-WNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 676
Query: 284 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 343
SH GLV++G +++++ F ++P +EH ++DLLGR+G L EA I MP++P+ ++
Sbjct: 677 SHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 736
Query: 344 WRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKI 400
WR+LL++C+IHG + A N+S+LE D +VL SNM+ + W + E VR M
Sbjct: 737 WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGF 796
Query: 401 GGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
++KK+ SW++L D + F D++H + I+ LE + + K G
Sbjct: 797 KNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESG 845
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 124/251 (49%), Gaps = 5/251 (1%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N ++ AG A VF +MP +D+++WN+L+ +V + R LD L L M+S+
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
+ TF S + C + +HGL++ + N I+ ALV MY K G + S++V
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 419
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG-L 288
+ R V WNA+I G A A+A F M VE V + IT V +L AC G L
Sbjct: 420 LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL 479
Query: 289 VNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 347
+ G+ H I+ F +++ +++ + + G+L + ++ + +++ W A+
Sbjct: 480 LERGKPLHAYIVSAGFESDEHVKN--SLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAM 536
Query: 348 LSACRIHGKKE 358
L+A HG E
Sbjct: 537 LAANAHHGHGE 547
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 126/247 (51%), Gaps = 13/247 (5%)
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
K G AR +FD MPVR+ V+WNT++ G V+ +L+G+ FR M ++P F AS
Sbjct: 4 KFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIAS 63
Query: 178 VVTGCARLGALC-NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 236
+VT C R G++ VHG + + + + +S A++ +Y G + S++VF+ +
Sbjct: 64 LVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR 123
Query: 237 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL--PDSITFVGILKACSHCGLVNE--- 291
+V W +++ G + G + I ++ M E V +S++ V S CGL+ +
Sbjct: 124 NVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLV-----ISSCGLLKDESL 178
Query: 292 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 351
GR+ + L + +L +++ +LG GN++ A + M E D + W ++ +A
Sbjct: 179 GRQIIGQVVKSGL-ESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAY 236
Query: 352 RIHGKKE 358
+G E
Sbjct: 237 AQNGHIE 243
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 35/280 (12%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N ++ K GE +R+V +MP RDVV WN LIGGY ++ L F+ M V
Sbjct: 401 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 460
Query: 170 PDGFTFASVVTGCARLGALCN-AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 228
+ T SV++ C G L K +H ++ + + + +L+ MYAKCG + S+
Sbjct: 461 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 520
Query: 229 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 288
+F+ + ++ WNAM+ A HG + + + S+M V D +F L A + +
Sbjct: 521 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 580
Query: 289 VNEGR-----------EH----FNIMQNRF-----------LIQP----QLEHYGTMVDL 318
+ EG+ EH FN + + ++ P L + ++
Sbjct: 581 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 640
Query: 319 LGRAGNLEEAC---NMIKAMPVEPDVVIWRALLSACRIHG 355
LGR G EE C + + M ++P V + +LL+AC HG
Sbjct: 641 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS-HG 679
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 8/245 (3%)
Query: 109 KNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV 168
+N +I L G D A +FD+M RD ++WN++ Y +N + R+F M
Sbjct: 198 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 257
Query: 169 EPDGFTFASVVTGCARLGALCNAKW---VHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 225
E + T +++++ LG + + KW +HGL+++ + L+ MYA GR
Sbjct: 258 EVNSTTVSTLLS---VLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 314
Query: 226 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 285
+ VF + + WN+++ G +LDA+ + M + +TF L AC
Sbjct: 315 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 374
Query: 286 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
+GR ++ L Q+ +V + G+ G + E+ ++ MP DVV W
Sbjct: 375 PDFFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMP-RRDVVAWN 432
Query: 346 ALLSA 350
AL+
Sbjct: 433 ALIGG 437
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 113/233 (48%), Gaps = 6/233 (2%)
Query: 120 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVV 179
G +RKVF++MP R+VV+W +L+ GY + + +++GM V + + + V+
Sbjct: 108 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVI 167
Query: 180 TGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHV 238
+ C L + + G +++ ++ + +L+ M G +D + +FD ++ RD +
Sbjct: 168 SSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 227
Query: 239 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFN 297
S WN++ A +G ++ +FS M + +S T +L H GR H
Sbjct: 228 S-WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGL 286
Query: 298 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
+++ F + T++ + AG EA + K MP + D++ W +L+++
Sbjct: 287 VVKMGF--DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 336
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 211 bits (538), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 186/340 (54%), Gaps = 3/340 (0%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D F + +IE G + + F +D+ +W ++I +V+N + LFR +
Sbjct: 392 DEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLF 451
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
S+ + P+ +T + +++ CA AL + + + G ++ + + + + MYAK G +
Sbjct: 452 SSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMP 511
Query: 225 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
++ QVF V V+ ++AMI+ LA HG A +A+ +F M+ + P+ F+G+L AC
Sbjct: 512 LANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACC 571
Query: 285 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 344
H GLV +G ++F M+N + I P +H+ +VDLLGR G L +A N+I + + V W
Sbjct: 572 HGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTW 631
Query: 345 RALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIG 401
RALLS+CR++ + + + LE SG +VLL N+Y +AE VR +M+
Sbjct: 632 RALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDR 691
Query: 402 GVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGL 441
GV+K+ SWI +G+ H F AD SH + I+ +LE +
Sbjct: 692 GVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 125/238 (52%), Gaps = 9/238 (3%)
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
K E AR++FD+MP R+++++N+LI GY + + + LF A ++ D FT+A
Sbjct: 94 KCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAG 153
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-ARD 236
+ C L + +HGL++ + L L+DMY+KCG++D + +FD RD
Sbjct: 154 ALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERD 213
Query: 237 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 296
VS WN++I+G G A + + + ++M + + + +LKAC C +NEG
Sbjct: 214 QVS-WNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKAC--CINLNEGFIEK 270
Query: 297 NIMQNRFLIQPQLEH----YGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
+ + + + +E ++D+ + G+L+EA + MP + +VV + A++S
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSK-NVVTYNAMISG 327
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 124/260 (47%), Gaps = 15/260 (5%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLD-----GLRL 159
D + +++ K G A K+F MP ++VVT+N +I G+++ D +L
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 160 FRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK 219
F M +EP TF+ V+ C+ L + +H L+ + + + + +AL+++YA
Sbjct: 346 FMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYAL 405
Query: 220 CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGI 279
G + Q F + ++ ++ W +MI+ + A +F ++ ++ P+ T +
Sbjct: 406 MGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLM 465
Query: 280 LKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTM----VDLLGRAGNLEEACNMIKAM 335
+ AC+ ++ G + +Q + I+ ++ + ++ + + ++GN+ A N +
Sbjct: 466 MSACADFAALSSGEQ----IQG-YAIKSGIDAFTSVKTSSISMYAKSGNMPLA-NQVFIE 519
Query: 336 PVEPDVVIWRALLSACRIHG 355
PDV + A++S+ HG
Sbjct: 520 VQNPDVATYSAMISSLAQHG 539
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 124/269 (46%), Gaps = 17/269 (6%)
Query: 107 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 166
F N++I+ K G+ D A +FD+ RD V+WN+LI GYV+ + L L M
Sbjct: 184 FLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRD 243
Query: 167 EVEPDGFTFASVVTGCA---RLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
+ + SV+ C G + +H + ++ + ++ AL+DMYAK G +
Sbjct: 244 GLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSL 303
Query: 224 DVSKQVFDTVARDHVSVWNAMINGL-----AVHGLALDAIAVFSRMEVENVLPDSITFVG 278
+ ++F + +V +NAMI+G + +A +F M+ + P TF
Sbjct: 304 KEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSV 363
Query: 279 ILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHY--GTMVDLLGRAGNLEEACNMIKAM 335
+LKACS + GR+ H I +N F Q + + +++L G+ E+ A
Sbjct: 364 VLKACSAAKTLEYGRQIHALICKNNF----QSDEFIGSALIELYALMGSTEDGMQCF-AS 418
Query: 336 PVEPDVVIWRALLSACRIHGKKELAEFAI 364
+ D+ W +++ C + ++ + F +
Sbjct: 419 TSKQDIASWTSMID-CHVQNEQLESAFDL 446
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 4/169 (2%)
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 242
A+ G++ K HG M++ + L L++MY KC + ++Q+FD + ++ +N
Sbjct: 58 AKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFN 117
Query: 243 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH-CGLVNEGREHFNIMQN 301
++I+G G A+ +F N+ D T+ G L C C L H ++ N
Sbjct: 118 SLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVN 177
Query: 302 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
+ Q+ ++D+ + G L++A ++ E D V W +L+S
Sbjct: 178 G--LSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLISG 223
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 193/349 (55%), Gaps = 5/349 (1%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D KN +I K G+ ++ +F+ + R+++TWN ++ + + L+L M
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 540
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI- 223
S V D F+F+ ++ A+L L + +HGL ++ + + + A DMY+KCG I
Sbjct: 541 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 600
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
+V K + +V R S WN +I+ L HG + A F M + P +TFV +L AC
Sbjct: 601 EVVKMLPPSVNRSLPS-WNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 659
Query: 284 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 343
SH GLV++G +++++ F ++P +EH ++DLLGR+G L EA I MP++P+ ++
Sbjct: 660 SHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 719
Query: 344 WRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKI 400
WR+LL++C+IHG + A N+S+LE D +VL SNM+ + W + E VR M
Sbjct: 720 WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGF 779
Query: 401 GGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
++KK+ SW++L D + F D++H + I+ LE + + K G
Sbjct: 780 KNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESG 828
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 124/251 (49%), Gaps = 5/251 (1%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N ++ AG A VF +MP +D+++WN+L+ +V + R LD L L M+S+
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 342
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
+ TF S + C + +HGL++ + N I+ ALV MY K G + S++V
Sbjct: 343 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 402
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG-L 288
+ R V WNA+I G A A+A F M VE V + IT V +L AC G L
Sbjct: 403 LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL 462
Query: 289 VNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 347
+ G+ H I+ F +++ +++ + + G+L + ++ + +++ W A+
Sbjct: 463 LERGKPLHAYIVSAGFESDEHVKN--SLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAM 519
Query: 348 LSACRIHGKKE 358
L+A HG E
Sbjct: 520 LAANAHHGHGE 530
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 35/280 (12%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N ++ K GE +R+V +MP RDVV WN LIGGY ++ L F+ M V
Sbjct: 384 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 443
Query: 170 PDGFTFASVVTGCARLGALCN-AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 228
+ T SV++ C G L K +H ++ + + + +L+ MYAKCG + S+
Sbjct: 444 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 503
Query: 229 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 288
+F+ + ++ WNAM+ A HG + + + S+M V D +F L A + +
Sbjct: 504 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 563
Query: 289 VNEGR-----------EH----FNIMQNRF-----------LIQP----QLEHYGTMVDL 318
+ EG+ EH FN + + ++ P L + ++
Sbjct: 564 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 623
Query: 319 LGRAGNLEEAC---NMIKAMPVEPDVVIWRALLSACRIHG 355
LGR G EE C + + M ++P V + +LL+AC HG
Sbjct: 624 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS-HG 662
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 119/233 (51%), Gaps = 13/233 (5%)
Query: 132 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC-N 190
MPVR+ V+WNT++ G V+ +L+G+ FR M ++P F AS+VT C R G++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 191 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAV 250
VHG + + + + +S A++ +Y G + S++VF+ + +V W +++ G +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 251 HGLALDAIAVFSRMEVENVL--PDSITFVGILKACSHCGLVNE---GREHFNIMQNRFLI 305
G + I ++ M E V +S++ V S CGL+ + GR+ + L
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLV-----ISSCGLLKDESLGRQIIGQVVKSGL- 174
Query: 306 QPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 358
+ +L +++ +LG GN++ A + M E D + W ++ +A +G E
Sbjct: 175 ESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHIE 226
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 8/245 (3%)
Query: 109 KNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV 168
+N +I L G D A +FD+M RD ++WN++ Y +N + R+F M
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 169 EPDGFTFASVVTGCARLGALCNAKW---VHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 225
E + T +++++ LG + + KW +HGL+++ + L+ MYA GR
Sbjct: 241 EVNSTTVSTLLS---VLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 297
Query: 226 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 285
+ VF + + WN+++ G +LDA+ + M + +TF L AC
Sbjct: 298 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 357
Query: 286 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
+GR ++ L Q+ +V + G+ G + E+ ++ MP DVV W
Sbjct: 358 PDFFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMP-RRDVVAWN 415
Query: 346 ALLSA 350
AL+
Sbjct: 416 ALIGG 420
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 113/233 (48%), Gaps = 6/233 (2%)
Query: 120 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVV 179
G +RKVF++MP R+VV+W +L+ GY + + +++GM V + + + V+
Sbjct: 91 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVI 150
Query: 180 TGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHV 238
+ C L + + G +++ ++ + +L+ M G +D + +FD ++ RD +
Sbjct: 151 SSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 210
Query: 239 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFN 297
S WN++ A +G ++ +FS M + +S T +L H GR H
Sbjct: 211 S-WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGL 269
Query: 298 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
+++ F + T++ + AG EA + K MP + D++ W +L+++
Sbjct: 270 VVKMGF--DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 319
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/330 (35%), Positives = 180/330 (54%), Gaps = 8/330 (2%)
Query: 120 GECDIARK---VFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 176
G+C R +F +M ++ V+W +L+ YV+N L+ VE F +
Sbjct: 255 GKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMIS 314
Query: 177 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 236
SV++ CA + L + +H ++ V+ + +ALVDMY KCG I+ S+Q FD +
Sbjct: 315 SVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 374
Query: 237 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENV--LPDSITFVGILKACSHCGLVNEGRE 294
++ N++I G A G A+A+F M P+ +TFV +L ACS G V G +
Sbjct: 375 NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMK 434
Query: 295 HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIH 354
F+ M++ + I+P EHY +VD+LGRAG +E A IK MP++P + +W AL +ACR+H
Sbjct: 435 IFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMH 494
Query: 355 GKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSW 411
GK +L A N+ +L +SG+ VLLSN + + W A VR +K G++K G SW
Sbjct: 495 GKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSW 554
Query: 412 IELGDSIHQFNAADQSHAEMKAIHRVLEGL 441
I + + +H F A D+SH K I L L
Sbjct: 555 ITVKNQVHAFQAKDRSHILNKEIQTTLAKL 584
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 8/261 (3%)
Query: 95 IAHHVFSRVMDT----FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKN 150
+ H + +D+ F N +I K + AR V P R+VV+W +LI G +N
Sbjct: 27 VVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQN 86
Query: 151 VRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS 210
F L F M V P+ FTF A L K +H L ++ L+ +
Sbjct: 87 GHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVG 146
Query: 211 AALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL 270
+ DMY K D ++++FD + ++ WNA I+ G +AI F +
Sbjct: 147 CSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGH 206
Query: 271 PDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEAC 329
P+SITF L ACS +N G + H ++++ F + ++D G+ + +
Sbjct: 207 PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGF--DTDVSVCNGLIDFYGKCKQIRSSE 264
Query: 330 NMIKAMPVEPDVVIWRALLSA 350
+ M + + V W +L++A
Sbjct: 265 IIFTEMGTK-NAVSWCSLVAA 284
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 111/259 (42%), Gaps = 2/259 (0%)
Query: 102 RVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR 161
R++D F + K D ARK+FD++P R++ TWN I V + R + + F
Sbjct: 139 RILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFI 198
Query: 162 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 221
+ P+ TF + + C+ L +HGL+L + + L+D Y KC
Sbjct: 199 EFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCK 258
Query: 222 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
+I S+ +F + + W +++ + A ++ R + V +L
Sbjct: 259 QIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLS 318
Query: 282 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 341
AC+ + GR + + ++ + +VD+ G+ G +E++ MP E ++
Sbjct: 319 ACAGMAGLELGRS-IHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNL 376
Query: 342 VIWRALLSACRIHGKKELA 360
V +L+ G+ ++A
Sbjct: 377 VTRNSLIGGYAHQGQVDMA 395
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/302 (39%), Positives = 174/302 (57%), Gaps = 9/302 (2%)
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
K G AR++FD +DVVTWN +I Y K + + L R M +++P+ TF
Sbjct: 274 KTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVG 333
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 237
+++ CA A + V L+ E+R+ L+ IL ALVDMYAK G ++ + ++F+ +
Sbjct: 334 LLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKD 393
Query: 238 VSVWNAMINGLAVHGLALDAIAVFSRMEVEN--VLPDSITFVGILKACSHCGLVNEGREH 295
V W AMI+G HGLA +A+ +F++ME EN V P+ ITF+ +L ACSH GLV EG
Sbjct: 394 VKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRC 453
Query: 296 FNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
F M + P++EHYG +VDLLGRAG LEEA +I+ +P+ D WRALL+ACR++G
Sbjct: 454 FKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYG 513
Query: 356 KKELAE---FAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWI 412
+L E +A + D +LL+ + N + + N + G RK+ G S I
Sbjct: 514 NADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEKS--LDNELNKG--RKEAGYSAI 569
Query: 413 EL 414
E+
Sbjct: 570 EI 571
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 106/226 (46%), Gaps = 5/226 (2%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
A +F+ + ++ +NT+I GY + +F + + + D F+F + + C+R
Sbjct: 78 ASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSR 137
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV-WNA 243
+ + +HG+ L + L AL+ Y CG+I +++VFD + + +V ++
Sbjct: 138 ELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFST 197
Query: 244 MING-LAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 302
++NG L V AL A+ +F M V+ + T + L A S G ++ G E +++ +
Sbjct: 198 LMNGYLQVSKKAL-ALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLS-GAESAHVLCIK 255
Query: 303 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 348
+ L ++ + G+ G + A I + DVV W ++
Sbjct: 256 IGLDLDLHLITALIGMYGKTGGISSA-RRIFDCAIRKDVVTWNCMI 300
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 190/327 (58%), Gaps = 11/327 (3%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
+ TF + +I K G+ D AR+VF++M +D V W +I Y +N + + +LF M
Sbjct: 266 LSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM 325
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
V PD T ++V++ C +GAL K + E ++ N ++ LVDMY KCGR+
Sbjct: 326 EKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRV 385
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
+ + +VF+ + + + WNAMI A G A +A+ +F RM +V P ITF+G+L AC
Sbjct: 386 EEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSAC 442
Query: 284 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 343
H GLV++G +F+ M + F + P++EHY ++DLL RAG L+EA ++ P +PD ++
Sbjct: 443 VHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIM 502
Query: 344 WRALLSACRIHGKKELA--EFAIANISRLE----SGDFVLLSNMYCSLKNWHNAERVRNM 397
A+L AC H +K++A E A+ + ++ +G++V+ SN+ +K W + ++R +
Sbjct: 503 LAAILGAC--HKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRAL 560
Query: 398 MKIGGVRKKRGKSWIELGDSIHQFNAA 424
M+ GV K G SWIE+ + +F A
Sbjct: 561 MRDRGVVKTPGCSWIEIEGELMEFLAG 587
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 126/233 (54%), Gaps = 2/233 (0%)
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
K G+ ARK+FD++ RD V+WN++I GY + D + LFR M EPD T S
Sbjct: 179 KCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVS 238
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 237
++ C+ LG L + + + + K++ L+ L + L+ MY KCG +D +++VF+ + +
Sbjct: 239 MLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKD 298
Query: 238 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 297
W AMI + +G + +A +F ME V PD+ T +L AC G + G++
Sbjct: 299 RVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQ-IE 357
Query: 298 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
+ +Q + +VD+ G+ G +EEA + +AMPV+ + W A+++A
Sbjct: 358 THASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEAT-WNAMITA 409
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 132/255 (51%), Gaps = 9/255 (3%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDG-LRLFRGMLSAEV 168
N +I ++ G+ + + +F + ++N +I G + L L+R M + +
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGL 128
Query: 169 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 228
+PD FT+ V CA+L + + VH + + ++ + ++ +L+ MYAKCG++ +++
Sbjct: 129 KPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARK 188
Query: 229 VFDTVA-RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 287
+FD + RD VS WN+MI+G + G A DA+ +F +ME E PD T V +L ACSH G
Sbjct: 189 LFDEITERDTVS-WNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLG 247
Query: 288 LVNEGR--EHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
+ GR E I + I ++ + G+ G+L+ A + M ++ D V W
Sbjct: 248 DLRTGRLLEEMAITKK---IGLSTFLGSKLISMYGKCGDLDSARRVFNQM-IKKDRVAWT 303
Query: 346 ALLSACRIHGKKELA 360
A+++ +GK A
Sbjct: 304 AMITVYSQNGKSSEA 318
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 208 bits (529), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 187/333 (56%), Gaps = 5/333 (1%)
Query: 107 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 166
F + +++ KAG+ AR++F+ +P RDVV+ +I GY + + L +F + S
Sbjct: 189 FVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSE 248
Query: 167 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
+ P+ T+AS++T + L L + K H +L + + +L +L+DMY+KCG + +
Sbjct: 249 GMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYA 308
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVEN-VLPDSITFVGILKACSH 285
+++FD + WNAM+ G + HGL + + +F M E V PD++T + +L CSH
Sbjct: 309 RRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSH 368
Query: 286 CGLVNEGREHFNIM-QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 344
+ + G F+ M + +P EHYG +VD+LGRAG ++EA IK MP +P +
Sbjct: 369 GRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVL 428
Query: 345 RALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIG 401
+LL ACR+H ++ E + +E +G++V+LSN+Y S W + VR MM
Sbjct: 429 GSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQK 488
Query: 402 GVRKKRGKSWIELGDSIHQFNAADQSHAEMKAI 434
V K+ G+SWI+ ++H F+A D++H + +
Sbjct: 489 AVTKEPGRSWIQHEQTLHYFHANDRTHPRREEV 521
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 155/289 (53%), Gaps = 10/289 (3%)
Query: 72 GYATYPSLVAALISTYA-RCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDI---ARK 127
G+ Y +L+ A + A R Q AH + +R + + L L+ G+CD ARK
Sbjct: 51 GFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLP--ATYLRTRLLIFYGKCDCLEDARK 108
Query: 128 VFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGA 187
V D+MP ++VV+W +I Y + + L +F M+ ++ +P+ FTFA+V+T C R
Sbjct: 109 VLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASG 168
Query: 188 LCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMING 247
L K +HGL+++ + + ++L+DMYAK G+I ++++F+ + V A+I G
Sbjct: 169 LGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAG 228
Query: 248 LAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQ 306
A GL +A+ +F R+ E + P+ +T+ +L A S L++ G++ H ++++
Sbjct: 229 YAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFY 288
Query: 307 PQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
L++ +++D+ + GNL A + MP E + W A+L HG
Sbjct: 289 AVLQN--SLIDMYSKCGNLSYARRLFDNMP-ERTAISWNAMLVGYSKHG 334
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 63 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFS--KNLVIESLMKAG 120
+ H++ + Y TY SL+ AL H HV R + ++ +N +I+ K G
Sbjct: 244 RLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCG 303
Query: 121 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-VEPDGFTFASVV 179
AR++FD MP R ++WN ++ GY K+ + L LFR M + V+PD T +V+
Sbjct: 304 NLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVL 363
Query: 180 TGCAR-----LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA 234
+GC+ G V G K +Y +VDM + GRID + F+ +
Sbjct: 364 SGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY---GCIVDMLGRAGRID---EAFEFIK 417
Query: 235 R 235
R
Sbjct: 418 R 418
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 207 bits (528), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 114/340 (33%), Positives = 186/340 (54%), Gaps = 9/340 (2%)
Query: 110 NLVIESLM-----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
N+V+E+ + K G ++A +VF +M + V+W +LI G+ +N M
Sbjct: 251 NVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQ 310
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
S +PD T V+ C+++G+L + VH +L++ V L+ + + AL+DMY+KCG +
Sbjct: 311 SLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALS 369
Query: 225 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
S+++F+ V R + WN MI+ +HG + +++F +M N+ PD TF +L A S
Sbjct: 370 SSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALS 429
Query: 285 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 344
H GLV +G+ F++M N++ IQP +HY ++DLL RAG +EEA +MI + ++ + IW
Sbjct: 430 HSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIW 489
Query: 345 RALLSACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIG 401
ALLS C H + + A I +L G L+SN + + W +VR +M+ G
Sbjct: 490 VALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNG 549
Query: 402 GVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGL 441
+ K G S IE+ + F D SH E + +VL L
Sbjct: 550 AMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNL 589
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 5/255 (1%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D F + V+ MK G+ D A +F KM RDV+ W T++ G+ + + L + +R M
Sbjct: 150 DVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQ 209
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
+ D ++ LG + VHG + + +N ++ +LVDMYAK G I+
Sbjct: 210 NEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIE 269
Query: 225 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
V+ +VF + W ++I+G A +GLA A M+ PD +T VG+L ACS
Sbjct: 270 VASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACS 329
Query: 285 HCGLVNEGR-EHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 343
G + GR H I++ L + ++D+ + G L + + + + D+V
Sbjct: 330 QVGSLKTGRLVHCYILKRHVLDRVTAT---ALMDMYSKCGALSSSREIFEHVG-RKDLVC 385
Query: 344 WRALLSACRIHGKKE 358
W ++S IHG +
Sbjct: 386 WNTMISCYGIHGNGQ 400
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 8/271 (2%)
Query: 106 TFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 165
+ S++L I S + GE ARKVFD++P R V +N++I Y + + LRL+ M++
Sbjct: 51 SISRDL-IASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIA 109
Query: 166 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 225
+++PD TF + C L + V ++ K + + ++++++Y KCG++D
Sbjct: 110 EKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDE 169
Query: 226 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 285
++ +F +A+ V W M+ G A G +L A+ + M+ E D + +G+L+A
Sbjct: 170 AEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGD 229
Query: 286 CGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 344
G GR H + + + +E ++VD+ + G +E A + M + V W
Sbjct: 230 LGDTKMGRSVHGYLYRTGLPMNVVVET--SLVDMYAKVGFIEVASRVFSRMMFKT-AVSW 286
Query: 345 RALLSACRIHGKKELAEFAIANISRLESGDF 375
+L+S +G LA A + ++S F
Sbjct: 287 GSLISGFAQNG---LANKAFEAVVEMQSLGF 314
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 93/175 (53%), Gaps = 6/175 (3%)
Query: 103 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
V+D + +++ K G +R++F+ + +D+V WNT+I Y + + + LF
Sbjct: 349 VLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLK 408
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAK-WVHGLMLEKRVKLNYILSAALVDMYAKCG 221
M + +EPD TFAS+++ + G + + W ++ + +++ + L+D+ A+ G
Sbjct: 409 MTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAG 468
Query: 222 RIDVSKQVFDTVARDH-VSVWNAMINGLAVH-GLALDAIAVFSRMEVENVLPDSI 274
R++ + + ++ D+ + +W A+++G H L++ IA +++ PDSI
Sbjct: 469 RVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLN---PDSI 520
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 185/347 (53%), Gaps = 10/347 (2%)
Query: 112 VIESLMK----AGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 167
V S+MK G A +F M RD+++W+T+IGGY + +G + F M +
Sbjct: 347 VSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSG 406
Query: 168 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 227
+P F AS+++ + + + VH L L ++ N + ++L++MY+KCG I +
Sbjct: 407 TKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEAS 466
Query: 228 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 287
+F RD + AMING A HG + +AI +F + PDS+TF+ +L AC+H G
Sbjct: 467 MIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSG 526
Query: 288 LVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 347
++ G +FN+MQ + ++P EHYG MVDLL RAG L +A MI M + D V+W L
Sbjct: 527 QLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTL 586
Query: 348 LSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVR 404
L AC+ G E A I L+ + V L+N+Y S N A VR MK GV
Sbjct: 587 LIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVI 646
Query: 405 KKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRA---KFD 448
K+ G S I++ D + F + D+ H + + I+ +LE + A +FD
Sbjct: 647 KEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILELAVSGAEAHRFD 693
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 129/262 (49%), Gaps = 6/262 (2%)
Query: 99 VFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLR 158
+ ++VM F N + SL+ AG AR+VFDKMP D+V+W ++I YV + L
Sbjct: 33 ISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALI 92
Query: 159 LFRGM--LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDM 216
LF M + V PD + V+ C + + + +H ++ + + + ++L+DM
Sbjct: 93 LFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDM 152
Query: 217 YAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
Y + G+ID S +VF + + W A+I GL G + + FS M L D+ TF
Sbjct: 153 YKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTF 212
Query: 277 VGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 335
LKAC+ V G+ H +++ F+ + + ++ + G +++ + + M
Sbjct: 213 AIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVAN--SLATMYTECGEMQDGLCLFENM 270
Query: 336 PVEPDVVIWRALLSACRIHGKK 357
E DVV W +L+ A + G++
Sbjct: 271 S-ERDVVSWTSLIVAYKRIGQE 291
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 137/313 (43%), Gaps = 29/313 (9%)
Query: 70 VHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVF 129
+H YA SL++++ +V S ++D + + G+ D + +VF
Sbjct: 130 LHAYAVKTSLLSSV--------------YVGSSLLDMYKR---------VGKIDKSCRVF 166
Query: 130 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 189
+MP R+ VTW +I G V R+ +GL F M +E D +TFA + CA L +
Sbjct: 167 SEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVK 226
Query: 190 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLA 249
K +H ++ + ++ +L MY +CG + +F+ ++ V W ++I
Sbjct: 227 YGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYK 286
Query: 250 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQ 308
G + A+ F +M V P+ TF + AC+ + G + H N++ +
Sbjct: 287 RIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLS--LGLNDS 344
Query: 309 LEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA-CRI-HGKKELAEFAIAN 366
L +M+ + GNL A + + M D++ W ++ C+ G++ F+
Sbjct: 345 LSVSNSMMKMYSTCGNLVSASVLFQGMRCR-DIISWSTIIGGYCQAGFGEEGFKYFSWMR 403
Query: 367 ISRLESGDFVLLS 379
S + DF L S
Sbjct: 404 QSGTKPTDFALAS 416
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 146/355 (41%), Gaps = 41/355 (11%)
Query: 7 TMLIKLQRLIHGAIKFGSLSESWSITQRSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHA 66
T L+ R G F +S S L+D F L+ H
Sbjct: 182 TGLVHAGRYKEGLTYFSEMSRS--------EELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 67 KLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIAR 126
+IV G+ T + +L + Y C + M+ G C
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGE------------------------MQDGLC---- 265
Query: 127 KVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLG 186
+F+ M RDVV+W +LI Y + + + + F M +++V P+ TFAS+ + CA L
Sbjct: 266 -LFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLS 324
Query: 187 ALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-ARDHVSVWNAMI 245
L + +H +L + + +S +++ MY+ CG + + +F + RD +S W+ +I
Sbjct: 325 RLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIIS-WSTII 383
Query: 246 NGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLI 305
G G + FS M P +L + ++ GR+ + + F +
Sbjct: 384 GGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQ-VHALALCFGL 442
Query: 306 QPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
+ +++++ + G+++EA +MI D+V A+++ HGK + A
Sbjct: 443 EQNSTVRSSLINMYSKCGSIKEA-SMIFGETDRDDIVSLTAMINGYAEHGKSKEA 496
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 94/250 (37%), Gaps = 47/250 (18%)
Query: 92 QPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNV 151
Q H F ++ ++ +I K G A +F + D+V+ +I GY ++
Sbjct: 432 QVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHG 491
Query: 152 RFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLE----KRVKLNY 207
+ + + LF L PD TF SV+T C G L +M E + K +Y
Sbjct: 492 KSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHY 551
Query: 208 ILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE 267
+VD+ + GR+ ++++ + ++ W
Sbjct: 552 ---GCMVDLLCRAGRLSDAEKMINEMS------WK------------------------- 577
Query: 268 NVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL-IQPQL-EHYGTMVDLLGRAGNL 325
D + + +L AC G + GR R L + P T+ ++ GNL
Sbjct: 578 ---KDDVVWTTLLIACKAKGDIERGRR----AAERILELDPTCATALVTLANIYSSTGNL 630
Query: 326 EEACNMIKAM 335
EEA N+ K M
Sbjct: 631 EEAANVRKNM 640
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 117/342 (34%), Positives = 185/342 (54%), Gaps = 4/342 (1%)
Query: 109 KNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV 168
+N +I K + A VF + + TWN++I GY + + + L R ML A
Sbjct: 318 RNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGF 377
Query: 169 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNY-ILSAALVDMYAKCGRIDVSK 227
+P+ T AS++ CAR+ L + K H +L ++ +Y +L +LVD+YAK G+I +K
Sbjct: 378 QPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAK 437
Query: 228 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 287
QV D +++ + ++I+G G A+A+F M + PD +T V +L ACSH
Sbjct: 438 QVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSK 497
Query: 288 LVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 347
LV+EG F MQ + I+P L+H+ MVDL GRAG L +A ++I MP +P W L
Sbjct: 498 LVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATL 557
Query: 348 LSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVR 404
L+AC IHG ++ ++A + ++ G +VL++NMY + +W VR +M+ GV+
Sbjct: 558 LNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVK 617
Query: 405 KKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 446
K G +WI+ F+ D S E + +L+GL Q K
Sbjct: 618 KDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMK 659
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 137/326 (42%), Gaps = 7/326 (2%)
Query: 41 DHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVF 100
D + VL+ ++D H + V Y + + ALIS Y R IA +F
Sbjct: 143 DAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLF 202
Query: 101 SRVM--DTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFL 154
R+ D S N VI G A ++FDKM V+TWN + GG ++ ++
Sbjct: 203 DRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYV 262
Query: 155 DGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALV 214
L L M + D + C+ +GA+ K +HGL + + L+
Sbjct: 263 GALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLI 322
Query: 215 DMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSI 274
MY+KC + + VF + + WN++I+G A + +A + M V P+SI
Sbjct: 323 TMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSI 382
Query: 275 TFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKA 334
T IL C+ + G+E + R + + ++VD+ ++G + A +
Sbjct: 383 TLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKI-VAAKQVSD 441
Query: 335 MPVEPDVVIWRALLSACRIHGKKELA 360
+ + D V + +L+ G+ +A
Sbjct: 442 LMSKRDEVTYTSLIDGYGNQGEGGVA 467
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
A+ + + + + WN LI Y KN F + + ++ M+S + PD FT+ SV+ C
Sbjct: 97 AQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGE 156
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-ARDHVSVWNA 243
+ + VHG + K + + AL+ MY + + +++++FD + RD VS WNA
Sbjct: 157 TLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVS-WNA 215
Query: 244 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 287
+IN A G+ +A +F +M V IT+ I C G
Sbjct: 216 VINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 4/175 (2%)
Query: 176 ASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR 235
AS+++ C + A VH + V+ + +L LV Y+ + ++ + +
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 236 DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR-E 294
H WN +I A + L + IA + RM + + PD+ T+ +LKAC V GR
Sbjct: 107 LHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVV 166
Query: 295 HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 349
H +I + + + L ++ + R N+ A + M E D V W A+++
Sbjct: 167 HGSIEVSSY--KSSLYVCNALISMYKRFRNMGIARRLFDRM-FERDAVSWNAVIN 218
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 183/318 (57%), Gaps = 13/318 (4%)
Query: 105 DTFSKNLVIESLMKAGECDI-----ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRL 159
D KN + SLM +G I AR +F ++ RD+V WNTLI GY +N D +
Sbjct: 202 DIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDA 261
Query: 160 FRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK 219
F M EPD T +S+++ CA+ G L + VH L+ + ++LN +S AL+DMYAK
Sbjct: 262 FFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAK 321
Query: 220 CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGI 279
CG ++ + VF++++ V+ N+MI+ LA+HG +A+ +FS ME ++ PD ITF+ +
Sbjct: 322 CGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAV 381
Query: 280 LKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEP 339
L AC H G + EG + F+ M+ + ++P ++H+G ++ LLGR+G L+EA ++K M V+P
Sbjct: 382 LTACVHGGFLMEGLKIFSEMKTQD-VKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKP 440
Query: 340 DVVIWRALLSACRIHGKKELAEFAIANISRLES-------GDFVLLSNMYCSLKNWHNAE 392
+ + ALL AC++H E+AE + I S +SN+Y + W AE
Sbjct: 441 NDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAE 500
Query: 393 RVRNMMKIGGVRKKRGKS 410
+R M+ G+ K G S
Sbjct: 501 ALRVEMEKRGLEKSPGLS 518
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 150/317 (47%), Gaps = 20/317 (6%)
Query: 65 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGEC 122
H++ I G + + ++LIS Y +C A VF + + + N +I M G+
Sbjct: 69 HSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDA 128
Query: 123 DIARKVFDKMPV-RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTG 181
+A +F+++ V R+ VTW +I GY K + LF M F +V
Sbjct: 129 VLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM--------PFELKNVKAW 180
Query: 182 CARLGALCNAKWVHGL--MLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-ARDHV 238
LG N + + E + N + + ++ Y + G + ++ +F V ARD V
Sbjct: 181 SVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLV 240
Query: 239 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 298
+WN +I G A +G + DAI F M+ E PD++T IL AC+ G ++ GRE ++
Sbjct: 241 -IWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSL 299
Query: 299 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 358
+ +R + Q ++D+ + G+LE A ++ +++ V V +++S IHGK
Sbjct: 300 INHRGIELNQFVS-NALIDMYAKCGDLENATSVFESISVR-SVACCNSMISCLAIHGK-- 355
Query: 359 LAEFAIANISRLESGDF 375
+ A+ S +ES D
Sbjct: 356 -GKEALEMFSTMESLDL 371
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 13/191 (6%)
Query: 71 HGYATYPSLVAALISTYARCHQPHIAHHVFSRV------MDTFSKNLVIESLMKAGECDI 124
GY V++++S A+ + + V S + ++ F N +I+ K G+ +
Sbjct: 268 EGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLEN 327
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
A VF+ + VR V N++I + + + L +F M S +++PD TF +V+T C
Sbjct: 328 ATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVH 387
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV----SV 240
G L + M + VK N L+ + + G++ K+ + V HV +V
Sbjct: 388 GGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKL---KEAYRLVKEMHVKPNDTV 444
Query: 241 WNAMINGLAVH 251
A++ VH
Sbjct: 445 LGALLGACKVH 455
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 80/160 (50%), Gaps = 7/160 (4%)
Query: 191 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAV 250
K +H ++ V + ++ ++L+ MY KCG + +++VFD + +V+ WNAMI G
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMS 124
Query: 251 HGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLE 310
+G A+ A +F + +V +++T++ ++K + + RE F M ++
Sbjct: 125 NGDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFEL---KNVK 178
Query: 311 HYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
+ M+ + +E+A + +P E + +W ++S
Sbjct: 179 AWSVMLGVYVNNRKMEDARKFFEDIP-EKNAFVWSLMMSG 217
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 196/401 (48%), Gaps = 5/401 (1%)
Query: 48 VLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV--MD 105
V Q S D + H K+I + SL A+I YA+C A +F + D
Sbjct: 240 VFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKD 299
Query: 106 TFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 165
+ + +I M G A +F +M + TWN +I G ++N + + FR M+
Sbjct: 300 SVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIR 359
Query: 166 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 225
P+ T +S++ L K +H + N ++ +++D YAK G +
Sbjct: 360 CGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLG 419
Query: 226 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 285
+++VFD + W A+I AVHG + A ++F +M+ PD +T +L A +H
Sbjct: 420 AQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAH 479
Query: 286 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
G + + F+ M ++ I+P +EHY MV +L RAG L +A I MP++P +W
Sbjct: 480 SGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWG 539
Query: 346 ALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGG 402
ALL+ + G E+A FA + +E +G++ +++N+Y W AE VRN MK G
Sbjct: 540 ALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIG 599
Query: 403 VRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQ 443
++K G SWIE + F A D S K ++ ++EGL++
Sbjct: 600 LKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVE 640
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 143/294 (48%), Gaps = 46/294 (15%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D F N +I K + ARKVFD+M RDVV+WN++I GY ++ F D ++++ ML
Sbjct: 166 DVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAML 225
Query: 165 S-AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
+ ++ +P+G T SV C + L VH M+E ++++ L A++ YAKCG +
Sbjct: 226 ACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSL 285
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEV----------------- 266
D ++ +FD ++ + A+I+G HGL +A+A+FS ME
Sbjct: 286 DYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNN 345
Query: 267 --ENVL------------PDSITFVGILKACSHCGLVNEGRE--HFNIM----QNRFLIQ 306
E V+ P+++T +L + ++ + G+E F I N ++
Sbjct: 346 HHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTT 405
Query: 307 PQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
+++Y + LLG A + + C + ++ W A+++A +HG + A
Sbjct: 406 SIIDNYAKLGFLLG-AQRVFDNCK-------DRSLIAWTAIITAYAVHGDSDSA 451
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 147/327 (44%), Gaps = 25/327 (7%)
Query: 92 QPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNV 151
Q H VFS D F + +I + A VFD++ VR+ ++N L+ Y
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 152 RFLDGLRLFRGML------SAEVEPDGFTFASVV---TGCAR--LGALCNAKWVHGLMLE 200
+ D LF + S PD + + V+ +GC LG+L A+ VHG ++
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSL--ARQVHGFVIR 160
Query: 201 KRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAV 260
+ + ++ Y KC I+ +++VFD ++ V WN+MI+G + G D +
Sbjct: 161 GGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKM 220
Query: 261 FSRM-EVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDL 318
+ M + P+ +T + + +AC + G E H +++N IQ L ++
Sbjct: 221 YKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENH--IQMDLSLCNAVIGF 278
Query: 319 LGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGDFVLL 378
+ G+L+ A + M E D V + A++S HG L + A+A S +ES
Sbjct: 279 YAKCGSLDYARALFDEMS-EKDSVTYGAIISGYMAHG---LVKEAMALFSEMESIGLSTW 334
Query: 379 SNMYCSL-KNWHNAERV---RNMMKIG 401
+ M L +N H+ E + R M++ G
Sbjct: 335 NAMISGLMQNNHHEEVINSFREMIRCG 361
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 211/393 (53%), Gaps = 52/393 (13%)
Query: 63 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 122
K H I G+ + PS+ + I+ YA+ F + D
Sbjct: 393 KIHGLCIKTGFVSEPSVGNSFITLYAK----------FEALED----------------- 425
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
A+K F+ + R++++WN +I G+ +N + L++F +AE P+ +TF SV+
Sbjct: 426 --AKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAI 482
Query: 183 A-------RLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR 235
A + G C H +L+ + ++S+AL+DMYAK G ID S++VF+ +++
Sbjct: 483 AFAEDISVKQGQRC-----HAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQ 537
Query: 236 DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREH 295
+ VW ++I+ + HG + +F +M ENV PD +TF+ +L AC+ G+V++G E
Sbjct: 538 KNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEI 597
Query: 296 FNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
FN+M + ++P EHY MVD+LGRAG L+EA ++ +P P + +++L +CR+HG
Sbjct: 598 FNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHG 657
Query: 356 K----KELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSW 411
++AE A+ L SG +V + N+Y + W A +R M+ V K+ G SW
Sbjct: 658 NVKMGAKVAELAMEMKPEL-SGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSW 716
Query: 412 IELGD-----SIHQFNAADQSHAEMKAIHRVLE 439
I++GD ++ F++ D+SH + I+R++E
Sbjct: 717 IDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVE 749
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 127/248 (51%), Gaps = 10/248 (4%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRF-LDGLRLFRGMLSAEV 168
N I ++G AR+VFD+M +D+++WN+L+ G + F + + +FR M+ V
Sbjct: 213 NSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGV 272
Query: 169 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 228
E D +F SV+T C L A+ +HGL +++ + + L+ Y+KCG ++ K
Sbjct: 273 ELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKS 332
Query: 229 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 288
VF ++ +V W MI+ DA+++F M + V P+ +TFVG++ A
Sbjct: 333 VFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQ 387
Query: 289 VNEG-REHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 347
+ EG + H ++ F+ +P + + + + L + LE+A + + +++ W A+
Sbjct: 388 IKEGLKIHGLCIKTGFVSEPSVGN--SFITLYAKFEALEDAKKAFEDITFR-EIISWNAM 444
Query: 348 LSACRIHG 355
+S +G
Sbjct: 445 ISGFAQNG 452
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 134/321 (41%), Gaps = 41/321 (12%)
Query: 41 DHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVF 100
DH F V+ D A + H I GY + + L+S Y++C
Sbjct: 275 DHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKC---------- 324
Query: 101 SRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLF 160
G + + VF +M R+VV+W T+I D + +F
Sbjct: 325 -------------------GVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIF 360
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
M V P+ TF ++ + +HGL ++ + + + +YAK
Sbjct: 361 LNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKF 420
Query: 221 GRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL 280
++ +K+ F+ + + WNAMI+G A +G + +A+ +F E +P+ TF +L
Sbjct: 421 EALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAE-TMPNEYTFGSVL 479
Query: 281 KACSHCG--LVNEG-REHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV 337
A + V +G R H ++++ P + ++D+ + GN++E+ + M
Sbjct: 480 NAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFNEMS- 536
Query: 338 EPDVVIWRALLSACRIHGKKE 358
+ + +W +++SA HG E
Sbjct: 537 QKNQFVWTSIISAYSSHGDFE 557
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 115/242 (47%), Gaps = 6/242 (2%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N V+ KAG D A +F+ + DVV+WNT++ G+ N L M SA V
Sbjct: 115 NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVV 171
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
D FT+++ ++ C + +++ ++ + ++ + + MY++ G +++V
Sbjct: 172 FDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRV 231
Query: 230 FDTVARDHVSVWNAMINGLAVHG-LALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 288
FD ++ + WN++++GL+ G +A+ +F M E V D ++F ++ C H
Sbjct: 232 FDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETD 291
Query: 289 VNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 348
+ R+ + R + LE ++ + G LE ++ M E +VV W ++
Sbjct: 292 LKLARQIHGLCIKRGY-ESLLEVGNILMSRYSKCGVLEAVKSVFHQMS-ERNVVSWTTMI 349
Query: 349 SA 350
S+
Sbjct: 350 SS 351
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 217/411 (52%), Gaps = 14/411 (3%)
Query: 10 IKLQRLIHGAIKFGSLSESWSITQRSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLI 69
+ L+HG ++ G L E+ + + D ++ ++ D A + +
Sbjct: 171 VSWNSLLHGYLESGELDEARRVFDKIPEK--DAVSWNLIISSYAKKGDMGNACSLFSAMP 228
Query: 70 VHGYATYPSLVAALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMKAGECDIARK 127
+ A++ LI Y C + +A F + + S +I K G+ A +
Sbjct: 229 LKSPASW----NILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEE 284
Query: 128 VFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML--SAEVEPDGFTFASVVTGCARL 185
+F M +D + ++ +I Y +N + D L+LF ML ++ ++PD T +SVV+ ++L
Sbjct: 285 LFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQL 344
Query: 186 GALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMI 245
G WV + E +K++ +LS +L+D+Y K G + ++F + + ++AMI
Sbjct: 345 GNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMI 404
Query: 246 NGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLI 305
G ++G+A +A ++F+ M + + P+ +TF G+L A SH GLV EG + FN M++ L
Sbjct: 405 MGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNL- 463
Query: 306 QPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIA 365
+P +HYG MVD+LGRAG LEEA +IK+MP++P+ +W ALL A +H E E A +
Sbjct: 464 EPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACS 523
Query: 366 NISRLESGDFVLLSNM---YCSLKNWHNAERVRNMMKIGGVRKKRGKSWIE 413
+ +LE+ LS++ Y S+ W +A VR+ +K + K G SW+E
Sbjct: 524 HCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 150/328 (45%), Gaps = 26/328 (7%)
Query: 35 SSHSLTDHSVFHRVLQRSRASMDSTTAAKT-HAKLIVHGYATYPSLVAALISTYARCHQP 93
SSH++T + R+ M++ K HA+ + +G + L+ Y+R
Sbjct: 103 SSHAVTS-------VLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYI 155
Query: 94 HIAHHVFSRVMD--TFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNV 151
+A F + + T S N ++ +++GE D AR+VFDK+P +D V+WN +I Y K
Sbjct: 156 ELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKG 215
Query: 152 RFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSA 211
+ LF M P + ++ G + A+ M +K N +
Sbjct: 216 DMGNACSLFSAM--PLKSPASWNI--LIGGYVNCREMKLARTYFDAMPQK----NGVSWI 267
Query: 212 ALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVEN--V 269
++ Y K G + ++++F +++ V++AMI +G DA+ +F++M N +
Sbjct: 268 TMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYI 327
Query: 270 LPDSITFVGILKACSHCGLVNEGR--EHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEE 327
PD IT ++ A S G + G E + I ++ I L +++DL + G+ +
Sbjct: 328 QPDEITLSSVVSANSQLGNTSFGTWVESY-ITEHGIKIDDLLS--TSLIDLYMKGGDFAK 384
Query: 328 ACNMIKAMPVEPDVVIWRALLSACRIHG 355
A M + + D V + A++ C I+G
Sbjct: 385 AFKMFSNLN-KKDTVSYSAMIMGCGING 411
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/327 (17%), Positives = 134/327 (40%), Gaps = 59/327 (18%)
Query: 61 AAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAG 120
A + HA+L+V+ Y +P + H FS+N+V
Sbjct: 19 AKQVHAQLVVNRYNHL---------------EPILVHQTL-HFTKEFSRNIVT------- 55
Query: 121 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 180
+++ D +W L+ ++ +F + + ++ M ++ + P SV+
Sbjct: 56 ---YVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLR 112
Query: 181 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 240
C ++ + + K +H L+ + + LV +Y++ G I+++K+ FD +A +
Sbjct: 113 ACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVS 172
Query: 241 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK------ACS---------- 284
WN++++G G +A VF ++ ++ + ++ K ACS
Sbjct: 173 WNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSP 232
Query: 285 -----------HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIK 333
+C + R +F+ M + + + TM+ + G+++ A + +
Sbjct: 233 ASWNILIGGYVNCREMKLARTYFDAMPQKNGVS-----WITMISGYTKLGDVQSAEELFR 287
Query: 334 AMPVEPDVVIWRALLSACRIHGKKELA 360
M + D +++ A+++ +GK + A
Sbjct: 288 LMS-KKDKLVYDAMIACYTQNGKPKDA 313
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 182/328 (55%), Gaps = 6/328 (1%)
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
D + +VF + + V+W +LI G V+N R L FR M+ ++P+ FT +S + GC
Sbjct: 319 DDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGC 378
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 242
+ L + +HG++ + + + L+D+Y KCG D+++ VFDT++ V N
Sbjct: 379 SNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLN 438
Query: 243 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 302
MI A +G +A+ +F RM + P+ +T + +L AC++ LV EG E F+ +
Sbjct: 439 TMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD 498
Query: 303 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEF 362
++ +HY MVDLLGRAG LEEA M+ + PD+V+WR LLSAC++H K E+AE
Sbjct: 499 KIMLTN-DHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAER 556
Query: 363 AIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIH 419
I +E GD +L+SN+Y S W+ +++ MK ++K SW+E+ H
Sbjct: 557 ITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETH 616
Query: 420 QFNAADQ-SHAEMKAIHRVLEGLIQRAK 446
F A D SH + I LE LI+++K
Sbjct: 617 TFMAGDLFSHPNSEQILENLEELIKKSK 644
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 159/317 (50%), Gaps = 11/317 (3%)
Query: 96 AHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLD 155
AH + S S + ++++ +K G+ D AR+VFD M R +VTWN+LI +K+ R +
Sbjct: 89 AHMLKSGFPAEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKE 148
Query: 156 GLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKL-NYILSAALV 214
+ ++R M++ V PD +T +SV + L A+ HGL + +++ N + +ALV
Sbjct: 149 AVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALV 208
Query: 215 DMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSI 274
DMY K G+ +K V D V V + A+I G + G +A+ F M VE V P+
Sbjct: 209 DMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEY 268
Query: 275 TFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIK 333
T+ +L +C + + G+ H ++++ F + L +++ + R ++++ + K
Sbjct: 269 TYASVLISCGNLKDIGNGKLIHGLMVKSGF--ESALASQTSLLTMYLRCSLVDDSLRVFK 326
Query: 334 AMPVEPDVVIWRALLSACRIHGKKELA--EFAIANISRLESGDFVLLSNMYCSLKNWHNA 391
+ P+ V W +L+S +G++E+A EF ++ F L S +L+ N
Sbjct: 327 CIEY-PNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSS----ALRGCSNL 381
Query: 392 ERVRNMMKIGGVRKKRG 408
+I G+ K G
Sbjct: 382 AMFEEGRQIHGIVTKYG 398
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 116/221 (52%), Gaps = 1/221 (0%)
Query: 103 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
V + F + +++ +K G+ A+ V D++ +DVV LI GY + + ++ F+
Sbjct: 198 VSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQS 257
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
ML +V+P+ +T+ASV+ C L + N K +HGLM++ + +L+ MY +C
Sbjct: 258 MLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSL 317
Query: 223 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
+D S +VF + + W ++I+GL +G A+ F +M +++ P+S T L+
Sbjct: 318 VDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRG 377
Query: 283 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAG 323
CS+ + EGR+ I+ + + G ++DL G+ G
Sbjct: 378 CSNLAMFEEGRQIHGIVTKYGFDRDKYAGSG-LIDLYGKCG 417
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Query: 95 IAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFL 154
+ + F R D ++ + +I+ K G D+AR VFD + DV++ NT+I Y +N
Sbjct: 394 VTKYGFDR--DKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGR 451
Query: 155 DGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALV 214
+ L LF M++ ++P+ T SV+ C + + + ++ L A +V
Sbjct: 452 EALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMV 511
Query: 215 DMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 251
D+ + GR++ ++ + V + +W +++ VH
Sbjct: 512 DLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVH 548
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 198/343 (57%), Gaps = 10/343 (2%)
Query: 110 NLVIESLMKAGECDIARKVFDKMP----VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 165
NL+I SL++ G+ D A+ +F +M + ++++W T++ G V+N + + R M
Sbjct: 480 NLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQE 539
Query: 166 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYI-LSAALVDMYAKCGRID 224
+ + P+ F+ ++ CA L +L + +HG ++ + + + +LVDMYAKCG I+
Sbjct: 540 SGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDIN 599
Query: 225 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
+++VF + + + NAMI+ A++G +AIA++ +E + PD+IT +L AC+
Sbjct: 600 KAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACN 659
Query: 285 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 344
H G +N+ E F + ++ ++P LEHYG MVDLL AG E+A +I+ MP +PD +
Sbjct: 660 HAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMI 719
Query: 345 RALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIG 401
++L+++C K EL ++ + E SG++V +SN Y +W ++R MMK
Sbjct: 720 QSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAK 779
Query: 402 GVRKKRGKSWIELG--DSIHQFNAADQSHAEMKAIHRVLEGLI 442
G++KK G SWI++ + +H F A D++H + I +L L+
Sbjct: 780 GLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLL 822
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 122/233 (52%), Gaps = 2/233 (0%)
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
K G D A KVFD++P R+ V WN L+ GYV+N + + +RLF M VEP T ++
Sbjct: 220 KCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVST 279
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 237
++ A +G + K H + + ++L+ IL +L++ Y K G I+ ++ VFD +
Sbjct: 280 CLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKD 339
Query: 238 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 297
V WN +I+G GL DAI + M +E + D +T ++ A + + G+E
Sbjct: 340 VVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKE-VQ 398
Query: 298 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
R + + T++D+ + G++ +A + + VE D+++W LL+A
Sbjct: 399 CYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAA 450
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 152/286 (53%), Gaps = 11/286 (3%)
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
K G + A VFD+M +DVVTWN +I GYV+ D + + + M +++ D T A+
Sbjct: 321 KVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLAT 380
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 237
+++ AR L K V + + + +L++ ++DMYAKCG I +K+VFD+
Sbjct: 381 LMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKD 440
Query: 238 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 297
+ +WN ++ A GL+ +A+ +F M++E V P+ IT+ I+ + G V+E ++ F
Sbjct: 441 LILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFL 500
Query: 298 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSAC--- 351
MQ+ +I P L + TM++ + + G EEA ++ M + P+ LSAC
Sbjct: 501 QMQSSGII-PNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHL 559
Query: 352 -RIHGKKELAEFAIANI--SRLESGDFVLLSNMYCSLKNWHNAERV 394
+H + + + I N+ S L S + L+ +MY + + AE+V
Sbjct: 560 ASLHIGRTIHGYIIRNLQHSSLVSIETSLV-DMYAKCGDINKAEKV 604
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 156/360 (43%), Gaps = 46/360 (12%)
Query: 21 KFGSLSESWS-ITQRSSHSL-TDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHG--YATY 76
K G + E+ S +T+ +L ++ +LQ D +T + HA+++ +G YA
Sbjct: 47 KNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARN 106
Query: 77 PSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRD 136
+ L+ YA+C IA +FS K+ VR+
Sbjct: 107 EYIETKLVIFYAKCDALEIAEVLFS-----------------------------KLRVRN 137
Query: 137 VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHG 196
V +W +IG + L F ML E+ PD F +V C L + VHG
Sbjct: 138 VFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHG 197
Query: 197 LMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALD 256
+++ ++ ++++L DMY KCG +D + +VFD + + WNA++ G +G +
Sbjct: 198 YVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEE 257
Query: 257 AIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREH-----FNIMQNRFLIQPQLEH 311
AI +FS M + V P +T L A ++ G V EG++ N M+ ++ L +
Sbjct: 258 AIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLN 317
Query: 312 YGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE 371
+ V L+ E M+ E DVV W ++S G E A + + + RLE
Sbjct: 318 FYCKVGLI-------EYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIY-MCQLMRLE 369
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 185/344 (53%), Gaps = 12/344 (3%)
Query: 101 SRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLF 160
S +MD +SK G + A +F+ D V+ ++ G +N + ++ F
Sbjct: 295 SALMDMYSK---------CGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFF 345
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
ML A VE D ++V+ +L K +H L+++++ N ++ L++MY+KC
Sbjct: 346 IRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKC 405
Query: 221 GRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL 280
G + S+ VF + + + WN+MI A HG L A+ ++ M V P +TF+ +L
Sbjct: 406 GDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLL 465
Query: 281 KACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 340
ACSH GL+++GRE N M+ I+P+ EHY ++D+LGRAG L+EA + I ++P++PD
Sbjct: 466 HACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPD 525
Query: 341 VVIWRALLSACRIHGKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNM 397
IW+ALL AC HG E+ E+A + + S +L++N+Y S W +
Sbjct: 526 CKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKR 585
Query: 398 MKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGL 441
MK GV K+ G S IE+ H F D+ H + +AI+ VL GL
Sbjct: 586 MKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGL 629
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 123/247 (49%), Gaps = 4/247 (1%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N +I S K G R VFD M R+V+T +I G ++N DGLRLF M V
Sbjct: 194 NKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVH 253
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
P+ T+ S + C+ + + +H L+ + ++ + +AL+DMY+KCG I+ + +
Sbjct: 254 PNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTI 313
Query: 230 FDTVAR-DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 288
F++ D VS+ ++ GLA +G +AI F RM V D+ +L
Sbjct: 314 FESTTEVDEVSM-TVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNS 372
Query: 289 VNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 348
+ G++ +++ R + G ++++ + G+L ++ + + MP + + V W +++
Sbjct: 373 LGLGKQLHSLVIKRKFSGNTFVNNG-LINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMI 430
Query: 349 SACRIHG 355
+A HG
Sbjct: 431 AAFARHG 437
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 123/254 (48%), Gaps = 9/254 (3%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N ++ K G+ A K+FD+MP+RDV++ N + G+++N G L + ML +
Sbjct: 94 NSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGS--- 150
Query: 170 PDGF---TFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
GF T V++ C K +H L + + L+ Y KCG
Sbjct: 151 -GGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSG 209
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 286
+ VFD ++ +V A+I+GL + L D + +FS M V P+S+T++ L ACS
Sbjct: 210 RGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGS 269
Query: 287 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 346
+ EG++ ++ ++ I+ +L ++D+ + G++E+A + ++ E D V
Sbjct: 270 QRIVEGQQIHALLW-KYGIESELCIESALMDMYSKCGSIEDAWTIFEST-TEVDEVSMTV 327
Query: 347 LLSACRIHGKKELA 360
+L +G +E A
Sbjct: 328 ILVGLAQNGSEEEA 341
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 123/267 (46%), Gaps = 24/267 (8%)
Query: 21 KFGSLSESWSITQRSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLV 80
K GS+ ++W+I + ++ D +L + A + +++ G ++V
Sbjct: 303 KCGSIEDAWTIFESTTE--VDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVV 360
Query: 81 AALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKVFDKMPV 134
+A++ + + + S V+ +TF N +I K G+ ++ VF +MP
Sbjct: 361 SAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPK 420
Query: 135 RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLG-------A 187
R+ V+WN++I + ++ L L+L+ M + EV+P TF S++ C+ +G
Sbjct: 421 RNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGREL 480
Query: 188 LCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNAMIN 246
L K VHG +E R + +Y ++DM + G + +K D++ + +W A++
Sbjct: 481 LNEMKEVHG--IEPRTE-HY---TCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLG 534
Query: 247 GLAVHGLALDAIAVFSRMEVENVLPDS 273
+ HG + ++ ++ PDS
Sbjct: 535 ACSFHGDT--EVGEYAAEQLFQTAPDS 559
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 175/313 (55%), Gaps = 8/313 (2%)
Query: 108 SKNLVIESLM----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLF-RG 162
+K LV+ L+ K + + +F+++ +++WN++I G V++ R +F +
Sbjct: 380 TKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQM 439
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
ML+ + PD T AS++ GC++L L K +HG L + + AL+DMYAKCG
Sbjct: 440 MLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGN 499
Query: 223 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
++ VF ++ + WN+MI+G ++ GL A++ + M + + PD ITF+G+L A
Sbjct: 500 EVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSA 559
Query: 283 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 342
C+H G V+EG+ F M F I P L+HY MV LLGRA EA +I M ++PD
Sbjct: 560 CNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSA 619
Query: 343 IWRALLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMK 399
+W ALLSAC IH + E+ E+ + L+ G +VL+SN+Y + W + RVRNMMK
Sbjct: 620 VWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMK 679
Query: 400 IGGVRKKRGKSWI 412
G G S I
Sbjct: 680 DNGYDGYLGVSQI 692
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 92 QPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNV 151
Q H+ R + + K ++ +K G A+ +FD+MP RD V WN LI GY +N
Sbjct: 73 QTHLTKSGLDRFV--YVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 152 RFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSA 211
D +LF ML P T +++ C + G + + VHG+ + ++L+ +
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKN 190
Query: 212 ALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLP 271
AL+ Y+KC + ++ +F + WN MI + GL +AI VF M +NV
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEI 250
Query: 272 DSITFVGILKA-CSH---------CGLVNE 291
+T + +L A SH CG+VN+
Sbjct: 251 SPVTIINLLSAHVSHEPLHCLVVKCGMVND 280
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 90/189 (47%), Gaps = 9/189 (4%)
Query: 171 DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF 230
D ++ GC + + +HG ++ + ++ L+ MY+K ++ +F
Sbjct: 346 DAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLF 405
Query: 231 DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKACSHCGLV 289
+ + + WN++I+G G A A VF +M + +LPD+IT +L CS +
Sbjct: 406 EQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCL 465
Query: 290 NEGRE-HFNIMQNRFLIQPQLEHY--GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 346
N G+E H ++N F + E++ ++D+ + GN +A ++ K++ P W +
Sbjct: 466 NLGKELHGYTLRNNF----ENENFVCTALIDMYAKCGNEVQAESVFKSIKA-PCTATWNS 520
Query: 347 LLSACRIHG 355
++S + G
Sbjct: 521 MISGYSLSG 529
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 116/257 (45%), Gaps = 8/257 (3%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
+D+ KN +I K E A +F +M + V+WNT+IG Y ++ + + +F+ M
Sbjct: 184 LDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM 243
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
VE S VT L A + + +H L+++ + + + +LV Y++CG +
Sbjct: 244 FEKNVE------ISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCL 297
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
+++++ + +D + ++++ A G A+ FS+ + D++ VGIL C
Sbjct: 298 VSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGC 357
Query: 284 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 343
++ G L L G ++ + + ++E + + + P ++
Sbjct: 358 KKSSHIDIGMSLHGYAIKSGLCTKTLVVNG-LITMYSKFDDVETVLFLFEQLQETP-LIS 415
Query: 344 WRALLSACRIHGKKELA 360
W +++S C G+ A
Sbjct: 416 WNSVISGCVQSGRASTA 432
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 103/237 (43%), Gaps = 8/237 (3%)
Query: 135 RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFT---FASVVTGCARLGALCNA 191
RD+ +++L+ + + +FR +L + + P+ FT F T L
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKL-QV 69
Query: 192 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 251
+ V + + + + +L+++Y K G + ++ +FD + VWNA+I G + +
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 252 GLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLE 310
G DA +F M + P + T V +L C CG V++GR H ++ + Q++
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 311 HYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANI 367
+ ++ + L A + + M + V W ++ A G +E A N+
Sbjct: 190 N--ALISFYSKCAELGSAEVLFREMK-DKSTVSWNTMIGAYSQSGLQEEAITVFKNM 243
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 204/393 (51%), Gaps = 18/393 (4%)
Query: 70 VHGYATY---------PSLVAALISTYARCHQPHIAHHVF---SRVMDTFSKNLVIESLM 117
VHGY+ P L AL+ YA+C AH +F S S N ++ +
Sbjct: 454 VHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYV 513
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
+G D A+ +F +M D+ TW+ ++ Y ++ + + +FR + + + P+ T +
Sbjct: 514 NSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMN 573
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYI-LSAALVDMYAKCGRIDVSKQVFDTVARD 236
++ CA+L +L + HG ++ R L I L L+D+YAKCG + + VF + AR
Sbjct: 574 LLPVCAQLASLHLVRQCHGYII--RGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARR 631
Query: 237 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 296
+ ++ AM+ G AVHG +A+ ++S M N+ PD + +L AC H GL+ +G + +
Sbjct: 632 DLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIY 691
Query: 297 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
+ ++ ++P +E Y VDL+ R G L++A + + MPVEP+ IW LL AC + +
Sbjct: 692 DSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNR 751
Query: 357 KELAEFAIANISRLES---GDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIE 413
+L ++ + ES G+ VL+SNMY + W +RN+MK ++K G SW+E
Sbjct: 752 MDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLE 811
Query: 414 LGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAK 446
+ + F + D SH +I ++ L + K
Sbjct: 812 VDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMK 844
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 140/316 (44%), Gaps = 36/316 (11%)
Query: 40 TDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHV 99
TDH VF V++ + D T+ H + G+ + ++++ YA+C
Sbjct: 19 TDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKC--------- 69
Query: 100 FSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRL 159
R MD +C +K+F +M D V WN ++ G + + +R
Sbjct: 70 --RRMD---------------DC---QKMFRQMDSLDPVVWNIVLTGLSVSCG-RETMRF 108
Query: 160 FRGM-LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYA 218
F+ M + E +P TFA V+ C RLG N K +H +++ ++ + ++ ALV MYA
Sbjct: 109 FKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYA 168
Query: 219 KCGRI-DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFV 277
K G I + FD +A V WNA+I G + + + DA F M E P+ T
Sbjct: 169 KFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIA 228
Query: 278 GILKACSHCG---LVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKA 334
+L C+ GR+ + + R +Q + ++V R G +EEA ++
Sbjct: 229 NVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTR 288
Query: 335 MPVEPDVVIWRALLSA 350
M + D+V W +++
Sbjct: 289 MGSK-DLVSWNVVIAG 303
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 119/253 (47%), Gaps = 9/253 (3%)
Query: 105 DTFSKNLVIESLMKAGEC-DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
DT N ++ K G A FD + +DVV+WN +I G+ +N D R F M
Sbjct: 156 DTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLM 215
Query: 164 LSAEVEPDGFTFASVVTGCARLG---ALCNAKWVHGLMLEKR-VKLNYILSAALVDMYAK 219
L EP+ T A+V+ CA + A + + +H ++++ ++ + + +LV Y +
Sbjct: 216 LKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLR 275
Query: 220 CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM-EVENVLPDSITFVG 278
GRI+ + +F + + WN +I G A + A +F + +V PDS+T +
Sbjct: 276 VGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIIS 335
Query: 279 ILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV 337
IL C+ + G+E H I+++ +L++ ++ R G+ A M
Sbjct: 336 ILPVCAQLTDLASGKEIHSYILRHSYLLE-DTSVGNALISFYARFGDTSAAYWAFSLMST 394
Query: 338 EPDVVIWRALLSA 350
+ D++ W A+L A
Sbjct: 395 K-DIISWNAILDA 406
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
DT N +I + G+ A F M +D+++WN ++ + + + L L +L
Sbjct: 365 DTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLL 424
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRV---KLNYILSAALVDMYAKCG 221
+ + D T S++ C + + K VHG ++ + + L AL+D YAKCG
Sbjct: 425 NEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCG 484
Query: 222 RI--------------------------------DVSKQVFDTVARDHVSVWNAMINGLA 249
+ D ++ +F ++ ++ W+ M+ A
Sbjct: 485 NVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYA 544
Query: 250 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQL 309
+AI VF ++ + P+++T + +L C+ ++ R+ + L +L
Sbjct: 545 ESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRL 604
Query: 310 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
+ GT++D+ + G+L+ A ++ ++ D+V++ A+++ +HG+ + A
Sbjct: 605 K--GTLLDVYAKCGSLKHAYSVFQS-DARRDLVMFTAMVAGYAVHGRGKEA 652
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 152 RFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYI--- 208
+F+ RL G + D F VV CA + L + + +HG + KL +I
Sbjct: 6 QFVQNFRLLSGFGT-----DHRVFLDVVKACASVSDLTSGRALHGCVF----KLGHIACS 56
Query: 209 -LSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRME-V 266
+S ++++MYAKC R+D +++F + VWN ++ GL+V + + F M
Sbjct: 57 EVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFA 115
Query: 267 ENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHY----GTMVDLLGRA 322
+ P S+TF +L C G G+ + ++I+ LE +V + +
Sbjct: 116 DEPKPSSVTFAIVLPLCVRLGDSYNGKS-----MHSYIIKAGLEKDTLVGNALVSMYAKF 170
Query: 323 GNLEEACNMIKAMPVEPDVVIWRALLSA 350
G + + DVV W A+++
Sbjct: 171 GFIFPDAYTAFDGIADKDVVSWNAIIAG 198
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 208/370 (56%), Gaps = 12/370 (3%)
Query: 82 ALISTYARCHQPHIAHHVFSRVM---DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVV 138
A+I+ YA+ ++ A +F +VM D S N +I ++ E + A +FD+MP ++V+
Sbjct: 238 AMITGYAQNNRIDEADQLF-QVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVI 296
Query: 139 TWNTLIGGYVKNVRFLDGLRLFRGML-SAEVEPDGFTFASVVTGCARLGALCNAKWVHGL 197
+W T+I GYV+N + L +F ML V+P+ T+ S+++ C+ L L + +H L
Sbjct: 297 SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQL 356
Query: 198 MLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDT---VARDHVSVWNAMINGLAVHGLA 254
+ + + N I+++AL++MY+K G + ++++FD RD +S WN+MI A HG
Sbjct: 357 ISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLIS-WNSMIAVYAHHGHG 415
Query: 255 LDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGT 314
+AI ++++M P ++T++ +L ACSH GLV +G E F + + + EHY
Sbjct: 416 KEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTC 475
Query: 315 MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRL---E 371
+VDL GRAG L++ N I + A+LSAC +H + +A+ + + +
Sbjct: 476 LVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDD 535
Query: 372 SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQSHAEM 431
+G +VL+SN+Y + A +R MK G++K+ G SW+++G H F D+SH +
Sbjct: 536 AGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQF 595
Query: 432 KAIHRVLEGL 441
+A+ +L L
Sbjct: 596 EALDSILSDL 605
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 119/240 (49%), Gaps = 19/240 (7%)
Query: 112 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS-AEVEP 170
+I L K G+ ARK+FD +P RDVVTW +I GY+K L +R R + +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIK----LGDMREARELFDRVDSRK 107
Query: 171 DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF 230
+ T+ ++V+G R L A+ + M E+ N + ++D YA+ GRID + ++F
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQSGRIDKALELF 163
Query: 231 DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVN 290
D + ++ WN+M+ L G +A+ +F RM +V +++ ++ + G V+
Sbjct: 164 DEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVD 219
Query: 291 EGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
E R F+ M R +I + M+ + ++EA + + MP E D W +++
Sbjct: 220 EARRLFDCMPERNIIS-----WNAMITGYAQNNRIDEADQLFQVMP-ERDFASWNTMITG 273
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 141/310 (45%), Gaps = 44/310 (14%)
Query: 81 AALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGECDIARKVFDKMPVRDVV 138
A++S Y R Q IA +F + + S N +I+ ++G D A ++FD+MP R++V
Sbjct: 113 TAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV 172
Query: 139 TWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLM 198
+WN+++ V+ R + + LF M +V ++ ++V G A+ G + A+ + M
Sbjct: 173 SWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 199 LEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAI 258
E+ N I A++ YA+ RID + Q+F + + WN MI G + A
Sbjct: 229 PER----NIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKAC 284
Query: 259 AVFSRMEVENVL--------------------------------PDSITFVGILKACSHC 286
+F RM +NV+ P+ T+V IL ACS
Sbjct: 285 GLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDL 344
Query: 287 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMI-KAMPVEPDVVIWR 345
+ EG++ ++ ++ + Q ++++ ++G L A M + + D++ W
Sbjct: 345 AGLVEGQQIHQLI-SKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWN 403
Query: 346 ALLSACRIHG 355
++++ HG
Sbjct: 404 SMIAVYAHHG 413
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 137/420 (32%), Positives = 215/420 (51%), Gaps = 50/420 (11%)
Query: 41 DHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVF 100
D + +L+ SR +D H ++ Y + +V++LI Y++ + A VF
Sbjct: 116 DAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVF 175
Query: 101 SRVMDTFSKNLVIESLMKAG-----ECDIARKVFDKMPV----RDVVTWNTLIGGY---- 147
S D ++LV+ + M +G + D A + M + DV+TWN LI G+
Sbjct: 176 S---DLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMR 232
Query: 148 -------VKNVRFLDGLR------------------------LFRGMLSAEVEPDGFTFA 176
+ + LDG + F+ ML+ + P+ T
Sbjct: 233 NEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATII 292
Query: 177 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 236
+++ C L + + K +HG + ++ + + +AL+DMY KCG I + +F +
Sbjct: 293 TLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKK 352
Query: 237 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 296
+N+MI A HGLA A+ +F +ME D +TF IL ACSH GL + G+ F
Sbjct: 353 TTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLF 412
Query: 297 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
+MQN++ I P+LEHY MVDLLGRAG L EA MIKAM +EPD+ +W ALL+ACR HG
Sbjct: 413 LLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGN 472
Query: 357 KELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIE 413
ELA A +++ LE SG+ +LL+++Y + +W + R++ M+K R+ G SW+E
Sbjct: 473 MELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 151/330 (45%), Gaps = 47/330 (14%)
Query: 65 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDI 124
HA L+ G A + A L++ Y C +V+D
Sbjct: 39 HAHLVTSGIARLTRIAAKLVTFYVEC----------GKVLD------------------- 69
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
ARKVFD+MP RD+ +IG +N + + L FR M ++ D F S++
Sbjct: 70 ARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRN 129
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 244
L K +H L+L+ + + + ++L+DMY+K G + +++VF + + V+NAM
Sbjct: 130 LLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAM 189
Query: 245 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 304
I+G A + A +A+ + M++ + PD IT+ ++ SH + NE + I++ L
Sbjct: 190 ISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH--MRNEEKVS-EILELMCL 246
Query: 305 --IQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSACRI-----H 354
+P + + +++ L E+A + K M + P+ LL AC H
Sbjct: 247 DGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKH 306
Query: 355 GKKELAEFAIANISRLESGDFV--LLSNMY 382
G KE+ +++ ++ LE FV L +MY
Sbjct: 307 G-KEIHGYSV--VTGLEDHGFVRSALLDMY 333
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 87/210 (41%), Gaps = 33/210 (15%)
Query: 174 TFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV 233
++ ++ R C + +H ++ + ++A LV Y +CG++ +++VFD +
Sbjct: 18 SYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEM 77
Query: 234 ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS--------- 284
+ +S MI A +G +++ F M + + D+ +LKA
Sbjct: 78 PKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGK 137
Query: 285 --HCGLVNEGREH--FNI-----MQNRF------------LIQPQLEHYGTMVDLLGRAG 323
HC ++ E F + M ++F L + L + M+
Sbjct: 138 MIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNS 197
Query: 324 NLEEACNMIKAMP---VEPDVVIWRALLSA 350
+EA N++K M ++PDV+ W AL+S
Sbjct: 198 QADEALNLVKDMKLLGIKPDVITWNALISG 227
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 195/369 (52%), Gaps = 37/369 (10%)
Query: 81 AALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGECDIARKVFDKMPVRDVV 138
AL+ Y + + A +F + + S N +++ L+K+G+ A+K+FD+MP RD++
Sbjct: 180 TALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDII 239
Query: 139 T-------------------------------WNTLIGGYVKNVRFLDGLRLFRGMLSAE 167
+ W+ LI GY +N + + ++F M +
Sbjct: 240 SYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKN 299
Query: 168 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLN-YILSAALVDMYAKCGRIDVS 226
V+PD F +++ C+++G + V + ++ K + + + AL+DM AKCG +D +
Sbjct: 300 VKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRA 359
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 286
++F+ + + + + +M+ G+A+HG +AI +F +M E ++PD + F ILK C
Sbjct: 360 AKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQS 419
Query: 287 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 346
LV EG +F +M+ ++ I +HY +V+LL R G L+EA +IK+MP E W +
Sbjct: 420 RLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGS 479
Query: 347 LLSACRIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGV 403
LL C +HG E+AE ++ LE +G +VLLSN+Y +L W + +R+ M G+
Sbjct: 480 LLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGI 539
Query: 404 RKKRGKSWI 412
K G+SWI
Sbjct: 540 TKICGRSWI 548
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 144/291 (49%), Gaps = 27/291 (9%)
Query: 75 TYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMK--AGEC-DI--ARKVF 129
T+P LV + S + H + R+ F K++V+ + G+C D+ ARKVF
Sbjct: 112 TFP-LVMKVCSNNGQVRVGSSVHGLVLRI--GFDKDVVVGTSFVDFYGKCKDLFSARKVF 168
Query: 130 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 189
+MP R+ V+W L+ YVK+ + +F M E + ++ ++V G + G L
Sbjct: 169 GEMPERNAVSWTALVVAYVKSGELEEAKSMFDLM----PERNLGSWNALVDGLVKSGDLV 224
Query: 190 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLA 249
NAK + ++ K + I +++D YAK G + ++ +F+ V W+A+I G A
Sbjct: 225 NAK----KLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYA 280
Query: 250 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG---LVNEGREHFNIMQNRFLIQ 306
+G +A VFS M +NV PD VG++ ACS G L + + + N+F
Sbjct: 281 QNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKF--- 337
Query: 307 PQLEHY--GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
HY ++D+ + G+++ A + + MP + D+V + +++ IHG
Sbjct: 338 --SSHYVVPALIDMNAKCGHMDRAAKLFEEMP-QRDLVSYCSMMEGMAIHG 385
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 109/269 (40%), Gaps = 44/269 (16%)
Query: 128 VFDKMPVRDVVTWNTLIGGYVKNVRFLDGLR-LFRGMLSAEVEPDGFTFASVVTGCARLG 186
VF+++P WN LI GY F + + L R M + PD +TF V+ C+ G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 187 ALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC-------------------------- 220
+ VHGL+L + ++ + VD Y KC
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 221 -----GRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSIT 275
G ++ +K +FD + ++ WNA+++GL G ++A +F M ++ I+
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDI----IS 240
Query: 276 FVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 335
+ ++ + G + R+ F + + + ++ + G EA + M
Sbjct: 241 YTSMIDGYAKGGDMVSARDLFEEARG-----VDVRAWSALILGYAQNGQPNEAFKVFSEM 295
Query: 336 ---PVEPDVVIWRALLSACRIHGKKELAE 361
V+PD I L+SAC G EL E
Sbjct: 296 CAKNVKPDEFIMVGLMSACSQMGCFELCE 324
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/381 (31%), Positives = 198/381 (51%), Gaps = 10/381 (2%)
Query: 35 SSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPH 94
+SH ++ F +++ + +S + H + + G+ P + + + Y
Sbjct: 79 ASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLE 138
Query: 95 IAHHVFSRVMD--TFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVR 152
+ +F +++ + N ++++ + GE D A + F +MPV DVV+W T+I G+ K
Sbjct: 139 SSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGL 198
Query: 153 FLDGLRLFRGMLSAE---VEPDGFTFASVVTGCARL--GALCNAKWVHGLMLEKRVKLNY 207
L +F M+ E + P+ TF SV++ CA G + K +HG ++ K + L
Sbjct: 199 HAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTT 258
Query: 208 ILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE 267
L AL+DMY K G ++++ +FD + V WNA+I+ LA +G A+ +F M+
Sbjct: 259 TLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSS 318
Query: 268 NVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEE 327
V P+ IT + IL AC+ LV+ G + F+ + + + I P EHYG +VDL+GRAG L +
Sbjct: 319 YVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVD 378
Query: 328 ACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLES---GDFVLLSNMYCS 384
A N I+++P EPD + ALL AC+IH EL + L+ G +V LS
Sbjct: 379 AANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNAL 438
Query: 385 LKNWHNAERVRNMMKIGGVRK 405
NW AE++R M G+RK
Sbjct: 439 DSNWSEAEKMRKAMIEAGIRK 459
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 122/280 (43%), Gaps = 44/280 (15%)
Query: 140 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 199
+NTLI Y+ + L LF ML++ V+P+ TF S++ ++ +HG L
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 200 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-------------------------- 233
++ + + + V Y + G ++ S+++FD +
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 234 ------ARDHVSVWNAMINGLAVHGLALDAIAVFSRM---EVENVLPDSITFVGILKACS 284
D VS W +ING + GL A+ VF M E + P+ TFV +L +C+
Sbjct: 174 YFQRMPVTDVVS-WTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 285 HC--GLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 341
+ G + G++ H +M ++ L ++D+ G+AG+LE A + + + V
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGT--ALLDMYGKAGDLEMALTIFDQIR-DKKV 289
Query: 342 VIWRALLSACRIHG--KKELAEFAIANISRLESGDFVLLS 379
W A++SA +G K+ L F + S + LL+
Sbjct: 290 CAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLA 329
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 178/320 (55%), Gaps = 13/320 (4%)
Query: 103 VMDTFSKNLVIESLM-----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGL 157
+ + N+V+ES + K G AR+VF+ M ++ V+W+ L+GGY +N +
Sbjct: 292 ITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAI 351
Query: 158 RLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMY 217
+FR M E D + F +V+ CA L A+ K +HG + + N I+ +AL+D+Y
Sbjct: 352 EIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLY 407
Query: 218 AKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFV 277
K G ID + +V+ ++ ++ WNAM++ LA +G +A++ F+ M + + PD I+F+
Sbjct: 408 GKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFI 467
Query: 278 GILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV 337
IL AC H G+V+EGR +F +M + I+P EHY M+DLLGRAG EEA N+++
Sbjct: 468 AILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAEC 527
Query: 338 EPDVVIWRALLSACRIHGK-KELAEFAIANISRLESG---DFVLLSNMYCSLKNWHNAER 393
D +W LL C + +AE + LE +VLLSNMY ++ +A
Sbjct: 528 RNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALN 587
Query: 394 VRNMMKIGGVRKKRGKSWIE 413
+R +M GV K G+SWI+
Sbjct: 588 IRKLMVRRGVAKTVGQSWID 607
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 129/238 (54%), Gaps = 9/238 (3%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-VEPDGFTFASVVTGCA 183
AR+VFD+MP DV+ W ++ + KN + + L LF M + + PDG TF +V+T C
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 184 RLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNA 243
L L K +HG ++ + N ++ ++L+DMY KCG + ++QVF+ +++ + W+A
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSA 336
Query: 244 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNR 302
++ G +G AI +F ME + D F +LKAC+ V G+E H ++
Sbjct: 337 LLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRG 392
Query: 303 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
+E ++DL G++G ++ A + M + +++ W A+LSA +G+ E A
Sbjct: 393 CFGNVIVE--SALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSALAQNGRGEEA 447
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 144/302 (47%), Gaps = 8/302 (2%)
Query: 64 THAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSK--NLVIESLMKAGE 121
TH+ I Y SL+ ++ H HV ++T N ++ K G
Sbjct: 52 THSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGP 111
Query: 122 -CDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 180
R+VFD V+D ++W +++ GYV + L +F M+S ++ + FT +S V
Sbjct: 112 GMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVK 171
Query: 181 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 240
C+ LG + + HG+++ + N+ +S+ L +Y +++VFD + V
Sbjct: 172 ACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVIC 231
Query: 241 WNAMINGLAVHGLALDAIAVFSRM-EVENVLPDSITFVGILKACSHCGLVNEGRE-HFNI 298
W A+++ + + L +A+ +F M + ++PD TF +L AC + + +G+E H +
Sbjct: 232 WTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKL 291
Query: 299 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKE 358
+ N +E +++D+ G+ G++ EA + M + + V W ALL +G+ E
Sbjct: 292 ITNGIGSNVVVE--SSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGGYCQNGEHE 348
Query: 359 LA 360
A
Sbjct: 349 KA 350
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/423 (30%), Positives = 207/423 (48%), Gaps = 16/423 (3%)
Query: 7 TMLIKLQRLIHGAIKFGSLSESWSI--TQRSSHSLT-DHSVFHRVLQRSRASMDSTTAAK 63
T LI L + + G+ ++ ++ SS +L D VF L+ A+
Sbjct: 10 TKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGS 69
Query: 64 THAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGE 121
HA + + + P + AL+ Y +C A +F + + N +I G+
Sbjct: 70 VHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
Query: 122 CDIARKVFDKMPV-RDVVTWNTLIGGYVKNVRFLDG----LRLFRGMLSAEVEPDGFTFA 176
A ++++ M V + ++N +I G V DG + +R M+ +P+ T
Sbjct: 130 VKEAVELYEAMDVMPNESSFNAIIKGLVGTE---DGSYRAIEFYRKMIEFRFKPNLITLL 186
Query: 177 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 236
++V+ C+ +GA K +H ++ + L + LV+ Y +CG I + VFD++
Sbjct: 187 ALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR 246
Query: 237 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 296
V W+++I+ A+HG A A+ F ME+ V PD I F+ +LKACSH GL +E +F
Sbjct: 247 DVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYF 306
Query: 297 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
MQ + ++ +HY +VD+L R G EEA +I+AMP +P W ALL ACR +G+
Sbjct: 307 KRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGE 366
Query: 357 KELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIE 413
ELAE A + +E ++VLL +Y S+ AER+R MK GV+ G SW
Sbjct: 367 IELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSWCL 426
Query: 414 LGD 416
D
Sbjct: 427 FKD 429
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/352 (34%), Positives = 182/352 (51%), Gaps = 15/352 (4%)
Query: 75 TYPSLVA----ALISTYARC-HQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVF 129
T SLV+ AL +C H + V+S D + +I K D+ +VF
Sbjct: 321 TIASLVSVCGDALKVNDGKCLHGWAVRQQVYS---DIIIETSLISMYAKCKRVDLCFRVF 377
Query: 130 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 189
W+ +I G V+N D L LF+ M +VEP+ T S++ A L L
Sbjct: 378 SGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLR 437
Query: 190 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH----VSVWNAMI 245
A +H + + + + LV +Y+KCG ++ + ++F+ + H V +W A+I
Sbjct: 438 QAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALI 497
Query: 246 NGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLI 305
+G +HG +A+ VF M V P+ ITF L ACSH GLV EG F M +
Sbjct: 498 SGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKT 557
Query: 306 QPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIA 365
+ HY +VDLLGRAG L+EA N+I +P EP +W ALL+AC H +L E A
Sbjct: 558 LARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAAN 617
Query: 366 NISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIEL 414
+ LE +G++VLL+N+Y +L W + E+VR+MM+ G+RKK G S IE+
Sbjct: 618 KLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 130/251 (51%), Gaps = 6/251 (2%)
Query: 109 KNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV 168
KN ++ +K G D AR VFD+M RDV+TW +I GY ++ + L L R M V
Sbjct: 256 KNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGV 315
Query: 169 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 228
P+ T AS+V+ C + + K +HG + ++V + I+ +L+ MYAKC R+D+ +
Sbjct: 316 RPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFR 375
Query: 229 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 288
VF ++ H W+A+I G + L DA+ +F RM E+V P+ T +L A +
Sbjct: 376 VFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALAD 435
Query: 289 VNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEA---CNMIKAMPVEPDVVIW 344
+ + H + + F+ L+ +V + + G LE A N I+ DVV+W
Sbjct: 436 LRQAMNIHCYLTKTGFM--SSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLW 493
Query: 345 RALLSACRIHG 355
AL+S +HG
Sbjct: 494 GALISGYGMHG 504
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 105/189 (55%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D + +N ++ M G+ ++AR VFD M RDV++WNT+I GY +N D L +F M+
Sbjct: 151 DKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMV 210
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
+ V+ D T S++ C L L + VH L+ EKR+ + ALV+MY KCGR+D
Sbjct: 211 NESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMD 270
Query: 225 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
++ VFD + R V W MING G +A+ + M+ E V P+++T ++ C
Sbjct: 271 EARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCG 330
Query: 285 HCGLVNEGR 293
VN+G+
Sbjct: 331 DALKVNDGK 339
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 120/241 (49%), Gaps = 9/241 (3%)
Query: 120 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE--PDGFTFAS 177
G ARK+F++MP ++++N +I YV+ + D + +F M+S V+ PDG+T+
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 237
V L ++ VHG +L + + AL+ MY G++++++ VFD +
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRD 182
Query: 238 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 297
V WN MI+G +G DA+ +F M E+V D T V +L C H + GR
Sbjct: 183 VISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK 242
Query: 298 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 357
+++ + L ++E +V++ + G ++EA + M DV+ W C I+G
Sbjct: 243 LVEEKRL-GDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITW-----TCMINGYT 295
Query: 358 E 358
E
Sbjct: 296 E 296
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 187/370 (50%), Gaps = 4/370 (1%)
Query: 70 VHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVF 129
H +A A L S Y Q H+ V +TF +I+ K G+ + AR F
Sbjct: 224 THTFAVMLRASAGLGSIYVG-KQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAF 282
Query: 130 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 189
+ MP + V WN +I GY + + L L M + V D FT + ++ +L L
Sbjct: 283 ECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLE 342
Query: 190 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLA 249
K H ++ + + + ALVD Y+K GR+D ++ VFD + R ++ WNA++ G A
Sbjct: 343 LTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYA 402
Query: 250 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQL 309
HG DA+ +F +M NV P+ +TF+ +L AC++ GL +G E F M I+P+
Sbjct: 403 NHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRA 462
Query: 310 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISR 369
HY M++LLGR G L+EA I+ P++ V +W ALL+ACR+ EL +
Sbjct: 463 MHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYG 522
Query: 370 L---ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQFNAADQ 426
+ + G++V++ NMY S+ A V ++ G+ +W+E+GD H F + D+
Sbjct: 523 MGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDR 582
Query: 427 SHAEMKAIHR 436
+ + + R
Sbjct: 583 FDSYNETVKR 592
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 142/292 (48%), Gaps = 14/292 (4%)
Query: 72 GYATYPSLVAALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIA 125
G +TY +LV A I R V+ +M + + N ++ +K G A
Sbjct: 122 GVSTYDALVEACI----RLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDA 177
Query: 126 RKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARL 185
R++FD++P R++ ++ ++I G+V +++ LF+ M + + TFA ++ A L
Sbjct: 178 RRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGL 237
Query: 186 GALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMI 245
G++ K +H L+ V N +S L+DMY+KCG I+ ++ F+ + WN +I
Sbjct: 238 GSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVI 297
Query: 246 NGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFL 304
G A+HG + +A+ + M V D T +++ + + ++ H ++++N F
Sbjct: 298 AGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGF- 356
Query: 305 IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
+ ++ +VD + G ++ A + +P +++ W AL+ HG+
Sbjct: 357 -ESEIVANTALVDFYSKWGRVDTARYVFDKLP-RKNIISWNALMGGYANHGR 406
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 198/392 (50%), Gaps = 27/392 (6%)
Query: 66 AKLIVHGYATYPSLVAA---------------LISTYARCHQPHIAHHVFSRVM---DTF 107
AK +VH YA+ + +A +I+ Y + A +F RV D
Sbjct: 342 AKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKV 401
Query: 108 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 167
S +I+ ++AG+ A +F K+ +D VTW +I G V+N F + L M+
Sbjct: 402 SWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCG 461
Query: 168 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRV--KLNYILSAALVDMYAKCGRIDV 225
++P T++ +++ L K +H ++ + + IL +LV MYAKCG I+
Sbjct: 462 LKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIED 521
Query: 226 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 285
+ ++F + + WN+MI GL+ HGLA A+ +F M P+S+TF+G+L ACSH
Sbjct: 522 AYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSH 581
Query: 286 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
GL+ G E F M+ + IQP ++HY +M+DLLGRAG L+EA I A+P PD ++
Sbjct: 582 SGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYG 641
Query: 346 ALLSACRIH-------GKKELAEFAIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMM 398
ALL C ++ G E A + + + + V L N+Y L + +R M
Sbjct: 642 ALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEM 701
Query: 399 KIGGVRKKRGKSWIELGDSIHQFNAADQSHAE 430
I GV+K G SW+ + + F + D+S +E
Sbjct: 702 GIKGVKKTPGCSWVVVNGRANVFLSGDKSASE 733
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 109/214 (50%), Gaps = 19/214 (8%)
Query: 82 ALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIAR-----KVFDKMPVRD 136
A+++ Y +C + + A +F + KN+V ++M CD R ++FD+MP R+
Sbjct: 113 AMLTGYVKCRRMNEAWTLFREM----PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERN 168
Query: 137 VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHG 196
VV+WNTL+ G ++N ++F M S +V ++ +++ G + AK + G
Sbjct: 169 VVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDV----VSWNAMIKGYIENDGMEEAKLLFG 224
Query: 197 LMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALD 256
M EK N + ++V Y + G + + ++F + ++ W AMI+G A + L +
Sbjct: 225 DMSEK----NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYRE 280
Query: 257 AIAVFSRM--EVENVLPDSITFVGILKACSHCGL 288
A+ +F M +V+ V P+ T + + AC G+
Sbjct: 281 ALMLFLEMKKDVDAVSPNGETLISLAYACGGLGV 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 27/243 (11%)
Query: 72 GYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVI--ESLM----KAGECDIA 125
G++ +L+ +S H A H+ ++ S N V+ SL+ K G D A
Sbjct: 41 GFSNEEALILRRLSEGGLVH----ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEA 96
Query: 126 RKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARL 185
R +F+ MP R++VT N ++ GYVK R + LFR M +VV+ L
Sbjct: 97 RVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK-----------NVVSWTVML 145
Query: 186 GALCNAKWVHGL--MLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNA 243
ALC+ + ++ + N + LV + G ++ +KQVFD + V WNA
Sbjct: 146 TALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNA 205
Query: 244 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 303
MI G + +A +F M +NV +T+ ++ G V E F M R
Sbjct: 206 MIKGYIENDGMEEAKLLFGDMSEKNV----VTWTSMVYGYCRYGDVREAYRLFCEMPERN 261
Query: 304 LIQ 306
++
Sbjct: 262 IVS 264
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 199 LEKRVKLNYILS-AALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDA 257
+ +R +N ++ +L+ YAK G +D ++ +F+ + ++ NAM+ G +A
Sbjct: 68 IPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEA 127
Query: 258 IAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVD 317
+F M +NV +++ +L A G + E F+ M R ++ + T+V
Sbjct: 128 WTLFREMP-KNV----VSWTVMLTALCDDGRSEDAVELFDEMPERNVVS-----WNTLVT 177
Query: 318 LLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGDFVL 377
L R G++E+A + AMP DVV W A++ + E A+ ++S +
Sbjct: 178 GLIRNGDMEKAKQVFDAMPSR-DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTS 236
Query: 378 LSNMYCSLKNWHNAERV 394
+ YC + A R+
Sbjct: 237 MVYGYCRYGDVREAYRL 253
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 189/351 (53%), Gaps = 10/351 (2%)
Query: 72 GYATYPSLVAALISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGECDIARKVF 129
G+ ++ + AL+ Y AH VF + + + N++I L G+ + A
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 130 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-VEPDGFTFASVVTGCARLGAL 188
+KMP R VV+W T+I GY + + + + LF M++ + ++P+ T +++ LG L
Sbjct: 213 EKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDL 272
Query: 189 CNAKWVHGLMLEKR-VKLNYILSAALVDMYAKCGRIDVSKQVFDTV--ARDHVSVWNAMI 245
VH + ++ V + ++ +L+D YAKCG I + + F + R ++ W MI
Sbjct: 273 KMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMI 332
Query: 246 NGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEG-REHFNIMQNRFL 304
+ A+HG+ +A+++F ME + P+ +T + +L ACSH GL E E FN M N +
Sbjct: 333 SAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYK 392
Query: 305 IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAI 364
I P ++HYG +VD+L R G LEEA + +P+E V+WR LL AC ++ ELAE
Sbjct: 393 ITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVT 452
Query: 365 ANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWI 412
+ LE GD+VL+SN++C + +A+R R M + GV K G S +
Sbjct: 453 RKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 195 bits (495), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 162/298 (54%), Gaps = 3/298 (1%)
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
K G +AR+V+D++P D V+ ++LI GY ++ DG LFR M+ + D F +S
Sbjct: 598 KCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISS 657
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 237
++ A VH + + + + ++L+ MY+K G ID + F +
Sbjct: 658 ILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPD 717
Query: 238 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 297
+ W A+I A HG A +A+ V++ M+ + PD +TFVG+L ACSH GLV E H N
Sbjct: 718 LIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLN 777
Query: 298 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 357
M + I+P+ HY MVD LGR+G L EA + I M ++PD ++W LL+AC+IHG+
Sbjct: 778 SMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEV 837
Query: 358 ELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWI 412
EL + A LE D ++ LSN+ + W E R +MK GV+K+ G S +
Sbjct: 838 ELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 122/241 (50%), Gaps = 6/241 (2%)
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
K G + + K+F +P +D W ++I G+ + + + LF ML PD T A+
Sbjct: 497 KCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAA 556
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR-D 236
V+T C+ +L K +HG L + L +ALV+MY+KCG + +++QV+D + D
Sbjct: 557 VLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELD 616
Query: 237 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-H 295
VS +++I+G + HGL D +F M + DS ILKA + + G + H
Sbjct: 617 PVSC-SSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVH 675
Query: 296 FNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
I + +P + +++ + + G++++ C + PD++ W AL+++ HG
Sbjct: 676 AYITKIGLCTEPSVG--SSLLTMYSKFGSIDDCCKAFSQIN-GPDLIAWTALIASYAQHG 732
Query: 356 K 356
K
Sbjct: 733 K 733
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 140/290 (48%), Gaps = 21/290 (7%)
Query: 75 TYPSLVAALISTYARCHQPHIAHHVFSRVM-----DTFSKNLVIESLMKAGECDIARKVF 129
TY S++AA A + V +RV+ D F +++ K G A +VF
Sbjct: 253 TYSSVLAAC----ASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVF 308
Query: 130 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 189
++P VV+W ++ GY K+ L +F+ M + VE + T SV++ C R +C
Sbjct: 309 SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVC 368
Query: 190 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF---DTVARDHVSVWNAMIN 246
A VH + + L+ ++AAL+ MY+K G ID+S+QVF D + R ++ N MI
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMIT 426
Query: 247 GLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLI 305
+ AI +F+RM E + D + +L S +N G++ H +++ ++
Sbjct: 427 SFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVL 483
Query: 306 QPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
L ++ L + G+LEE+ + + +P + D W +++S +G
Sbjct: 484 --DLTVGSSLFTLYSKCGSLEESYKLFQGIPFK-DNACWASMISGFNEYG 530
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 17/254 (6%)
Query: 78 SLVAALISTYARCHQPHIAHHVF----SRVMDTFSKNLVIESLMKAGECDIARKVFDKMP 133
+L A L S CH + + + S ++D FSKNL E A KVF
Sbjct: 162 ALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFED---------AYKVFRDSL 212
Query: 134 VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKW 193
+V WNT+I G ++N + LF M +PD +T++SV+ CA L L K
Sbjct: 213 SANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKV 272
Query: 194 VHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGL 253
V +++ + + + A+VD+YAKCG + + +VF + V W M++G
Sbjct: 273 VQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSND 331
Query: 254 ALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHY 312
A A+ +F M V ++ T ++ AC +V E + H + ++ F + +
Sbjct: 332 AFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVA-- 389
Query: 313 GTMVDLLGRAGNLE 326
++ + ++G+++
Sbjct: 390 AALISMYSKSGDID 403
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 39/298 (13%)
Query: 61 AAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAG 120
A++ HA + G+ S+ AALIS Y++ ++ VF + D +N+V
Sbjct: 370 ASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-------- 421
Query: 121 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV-- 178
N +I + ++ + +RLF ML + D F+ S+
Sbjct: 422 --------------------NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS 461
Query: 179 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 238
V C LG K VHG L+ + L+ + ++L +Y+KCG ++ S ++F +
Sbjct: 462 VLDCLNLG-----KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDN 516
Query: 239 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFN 297
+ W +MI+G +G +AI +FS M + PD T +L CS + G+E H
Sbjct: 517 ACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGY 576
Query: 298 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
+ R I ++ +V++ + G+L+ A + +P E D V +L+S HG
Sbjct: 577 TL--RAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-ELDPVSCSSLISGYSQHG 631
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 120/257 (46%), Gaps = 23/257 (8%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
D F ++ +G A K+FD +P DVV+ N +I GY ++ F + LR F M
Sbjct: 82 FDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKM 141
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNY----ILSAALVDMYAK 219
E + ++ SV++ C+ L A L+ +K+ Y ++ +AL+D+++K
Sbjct: 142 HFLGFEANEISYGSVISACSAL----QAPLFSELVCCHTIKMGYFFYEVVESALIDVFSK 197
Query: 220 CGRIDVSKQVFDTVARDHVSVWNAMINGL---AVHGLALDAIAVFSRMEVENVLPDSITF 276
R + + +VF +V WN +I G +G D +F M V PDS T+
Sbjct: 198 NLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFD---LFHEMCVGFQKPDSYTY 254
Query: 277 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHY---GTMVDLLGRAGNLEEACNMIK 333
+L AC+ + G+ ++Q R +I+ E +VDL + G++ EA +
Sbjct: 255 SSVLAACASLEKLRFGK----VVQAR-VIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFS 309
Query: 334 AMPVEPDVVIWRALLSA 350
+P P VV W +LS
Sbjct: 310 RIP-NPSVVSWTVMLSG 325
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 177/328 (53%), Gaps = 15/328 (4%)
Query: 127 KVFDKMP-VRDVVTWNTLIGGYVKNVRFLDGLR---LFRGMLSAEVEPDGFTFASVVTGC 182
K+F +M RD+V WN +I + D R LF + ++ PD +TF+SV+ C
Sbjct: 324 KLFMEMSHCRDIVAWNGIITAFA----VYDPERAIHLFGQLRQEKLSPDWYTFSSVLKAC 379
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 242
A L +A +H +++ + +L+ +L+ YAKCG +D+ +VFD + V WN
Sbjct: 380 AGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWN 439
Query: 243 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 302
+M+ ++HG + VF +M++ PDS TF+ +L ACSH G V EG F M +
Sbjct: 440 SMLKAYSLHGQVDSILPVFQKMDIN---PDSATFIALLSACSHAGRVEEGLRIFRSMFEK 496
Query: 303 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEF 362
PQL HY ++D+L RA EA +IK MP++PD V+W ALL +CR HG L +
Sbjct: 497 PETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKL 556
Query: 363 AIANISRL----ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSI 418
A + L S ++ +SN+Y + +++ A M+ VRK+ SW E+G+ +
Sbjct: 557 AADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKV 616
Query: 419 HQFNAADQSHAEMKAIHRVLEGLIQRAK 446
H+F + + + +A++R L+ LI K
Sbjct: 617 HEFASGGRHRPDKEAVYRELKRLISWLK 644
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 91/189 (48%), Gaps = 8/189 (4%)
Query: 94 HIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRF 153
H+ H + + N +I K G AR+VFD MP R+VV+W LI GYV+
Sbjct: 84 HMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNE 143
Query: 154 LDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAAL 213
+G LF MLS P+ FT +SV+T C K VHGL L+ + + ++ A+
Sbjct: 144 QEGFCLFSSMLS-HCFPNEFTLSSVLTSCRYEP----GKQVHGLALKLGLHCSIYVANAV 198
Query: 214 VDMYAKCGRIDVSKQ---VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL 270
+ MY +C + + VF+ + ++ WN+MI L AI VF RM + V
Sbjct: 199 ISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVG 258
Query: 271 PDSITFVGI 279
D T + I
Sbjct: 259 FDRATLLNI 267
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
DT N +I + K G D+ +VFD M RDVV+WN+++ Y + + L +F+ M
Sbjct: 403 DTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM- 461
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKR---VKLNYILSAALVDMYAKCG 221
++ PD TF ++++ C+ G + + M EK +LN+ A ++DM ++
Sbjct: 462 --DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHY--ACVIDMLSRAE 517
Query: 222 RIDVSKQVFDTVARD-HVSVWNAMINGLAVHG 252
R +++V + D VW A++ HG
Sbjct: 518 RFAEAEEVIKQMPMDPDAVVWIALLGSCRKHG 549
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 185/343 (53%), Gaps = 12/343 (3%)
Query: 112 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEP- 170
+++ +K + A + F ++ + V+W+ +I GY + +F + ++ F+ + S
Sbjct: 326 LVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASIL 385
Query: 171 DGFTFASVVTGCARLGALCN-AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
+ FT+ S+ C+ L A CN VH +++ + + +AL+ MY+KCG +D + +V
Sbjct: 386 NSFTYTSIFQACSVL-ADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEV 444
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 289
F+++ + W A I+G A +G A +A+ +F +M + P+S+TF+ +L ACSH GLV
Sbjct: 445 FESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLV 504
Query: 290 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 349
+G+ + M ++ + P ++HY M+D+ R+G L+EA +K MP EPD + W+ LS
Sbjct: 505 EQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLS 564
Query: 350 ACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKK 406
C H EL E A + +L+ D +VL N+Y W A + +M ++K+
Sbjct: 565 GCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKE 624
Query: 407 RGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFDG 449
SWI+ IH+F D+ H + + I+ L+ +FDG
Sbjct: 625 LSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLK------EFDG 661
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 129/296 (43%), Gaps = 36/296 (12%)
Query: 63 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 122
+ HA +I G + S+ +++ Y +C G
Sbjct: 205 QIHAHVIRAGLCSNTSIETGIVNMYVKC-----------------------------GWL 235
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
A++VFD+M V+ V L+ GY + R D L+LF +++ VE D F F+ V+ C
Sbjct: 236 VGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKAC 295
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 242
A L L K +H + + ++ + LVD Y KC + + + F + + W+
Sbjct: 296 ASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWS 355
Query: 243 AMINGLAVHGLALDAIAVFSRMEVENV-LPDSITFVGILKACSHCGLVNEGREHFNIMQN 301
A+I+G +A+ F + +N + +S T+ I +ACS N G +
Sbjct: 356 AIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIK 415
Query: 302 RFLIQPQLEHYG--TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
R LI Q YG ++ + + G L++A + ++M PD+V W A +S +G
Sbjct: 416 RSLIGSQ---YGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYG 467
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 130/275 (47%), Gaps = 9/275 (3%)
Query: 109 KNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV 168
+N V++ + + A K+FD+M + V+ T+I Y + + LF GML++
Sbjct: 121 QNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGD 180
Query: 169 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 228
+P + +++ AL + +H ++ + N + +V+MY KCG + +K+
Sbjct: 181 KPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKR 240
Query: 229 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGL 288
VFD +A ++ G G A DA+ +F + E V DS F +LKAC+
Sbjct: 241 VFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEE 300
Query: 289 VNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 348
+N G++ + + ++ ++ +VD + + E AC + + EP+ V W A++
Sbjct: 301 LNLGKQ-IHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EPNDVSWSAII 358
Query: 349 SACRIHGKKELAEF--AIANISRLESGDFVLLSNM 381
S G ++++F A+ L S + +L++
Sbjct: 359 S-----GYCQMSQFEEAVKTFKSLRSKNASILNSF 388
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 102/237 (43%), Gaps = 11/237 (4%)
Query: 75 TYPSLVAALISTYARCH---QPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDK 131
TY S+ A S A C+ Q H S + + ++ +I K G D A +VF+
Sbjct: 389 TYTSIFQA-CSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFES 447
Query: 132 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA 191
M D+V W I G+ + LRLF M+S ++P+ TF +V+T C+ G +
Sbjct: 448 MDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQG 507
Query: 192 KWVHGLMLEK-RVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV-WNAMINGLA 249
K ML K V ++D+YA+ G +D + + + + ++ W ++G
Sbjct: 508 KHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCW 567
Query: 250 VH-GLALDAIAVFSRMEVENVLP-DSITFVGILKACSHCGLVNEGREHFNIMQNRFL 304
H L L IA E+ + P D+ +V + G E E +M R L
Sbjct: 568 THKNLELGEIA---GEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERML 621
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 181/343 (52%), Gaps = 27/343 (7%)
Query: 95 IAHHVFSRVMDTFSKNLVIESLM----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVK- 149
I H + ++ + L+ +L+ K G+ ARKVFD+MP R VTWN +IGGY
Sbjct: 132 IVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSH 191
Query: 150 ------NVRFLDGLRLFR--GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLM--L 199
N R + LFR + V P T V++ ++ G L VHG + L
Sbjct: 192 KDKGNHNAR--KAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKL 249
Query: 200 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIA 259
+++ + ALVDMY+KCG ++ + VF+ + +V W +M GLA++G +
Sbjct: 250 GFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPN 309
Query: 260 VFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLL 319
+ +RM + P+ ITF +L A H GLV EG E F M+ RF + P +EHYG +VDLL
Sbjct: 310 LLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLL 369
Query: 320 GRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAE---FAIANISR------- 369
G+AG ++EA I AMP++PD ++ R+L +AC I+G+ + E A+ I R
Sbjct: 370 GKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSG 429
Query: 370 LESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWI 412
E D+V LSN+ W E++R MK ++ + G S++
Sbjct: 430 SECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 173/314 (55%), Gaps = 9/314 (2%)
Query: 107 FSKNLVIESLMKAGECDI-----ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR 161
FS +L + S + D+ ARK+FD MPVRD V + + GGYV+ + GL +FR
Sbjct: 165 FSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFR 224
Query: 162 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 221
M + D S++ C +LGAL + K VHG + + L L A+ DMY KC
Sbjct: 225 EMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCS 284
Query: 222 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
+D + VF ++R V W+++I G + G + + +F M E + P+++TF+G+L
Sbjct: 285 ILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLS 344
Query: 282 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 341
AC+H GLV + +F +MQ + I P+L+HY ++ D + RAG LEEA ++ MPV+PD
Sbjct: 345 ACAHGGLVEKSWLYFRLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDE 403
Query: 342 VIWRALLSACRIHGKKELAEFAIANISRL---ESGDFVLLSNMYCSLKNWHNAERVRNMM 398
+ A+LS C+++G E+ E + +L ++ +V L+ +Y + + AE +R M
Sbjct: 404 AVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWM 463
Query: 399 KIGGVRKKRGKSWI 412
K + K G S I
Sbjct: 464 KEKQISKVPGCSSI 477
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
Query: 128 VFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-VEPDGFTFASVVTGCARLG 186
VF MP R++ +WN +IG + ++ + LF M V PD FT ++ C+
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 187 ALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNAMI 245
+ +H L L+ + +S+ALV MY G++ ++++FD + RD V ++ AM
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSV-LYTAMF 207
Query: 246 NGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR 293
G G A+ +A+F M DS+ V +L AC G + G+
Sbjct: 208 GGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGK 255
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 176/331 (53%), Gaps = 15/331 (4%)
Query: 81 AALISTYARCHQPHIAHHVFSRVMDT---FSKNLVIESLMKAGECDIARKVFDKMPVR-- 135
ALI Y++C A+ VF+ + DT S N VI +M G+ + A ++F+K+
Sbjct: 270 TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGL 329
Query: 136 --DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKW 193
D TWN+LI G+ + + ++ + F MLS + P S+++ C+ + L N K
Sbjct: 330 KPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKE 389
Query: 194 VHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV---ARDHVSVWNAMINGLAV 250
+HG +++ + + + +L+DMY KCG ++++FD +D V WN MI+G
Sbjct: 390 IHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPV-FWNVMISGYGK 448
Query: 251 HGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLE 310
HG AI +F + E V P TF +L ACSHCG V +G + F +MQ + +P E
Sbjct: 449 HGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTE 508
Query: 311 HYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRL 370
H G M+DLLGR+G L EA +I M V +LL +CR H L E A ++ L
Sbjct: 509 HIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAEL 567
Query: 371 E---SGDFVLLSNMYCSLKNWHNAERVRNMM 398
E FV+LS++Y +L+ W + E +R ++
Sbjct: 568 EPENPAPFVILSSIYAALERWEDVESIRQVI 598
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 115/211 (54%), Gaps = 7/211 (3%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKN--VRFLDGLRLFR 161
M+ + ++ + GE +A ++F+K+P + VVT+N I G ++N + + +
Sbjct: 162 MEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLM 221
Query: 162 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 221
S+E EP+ TF + +T CA L L + +HGL+++K + ++ AL+DMY+KC
Sbjct: 222 RKFSSE-EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCR 280
Query: 222 RIDVSKQVFDTV--ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGI 279
+ VF + R+ +S WN++I+G+ ++G A+ +F +++ E + PDS T+ +
Sbjct: 281 CWKSAYIVFTELKDTRNLIS-WNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSL 339
Query: 280 LKACSHCGLVNEGREHFNIMQNRFLIQPQLE 310
+ S G V E + F M + ++ P L+
Sbjct: 340 ISGFSQLGKVIEAFKFFERMLSVVMV-PSLK 369
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 128/260 (49%), Gaps = 9/260 (3%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
+D F+ ++ MK + A KV D+MP R + + N + G ++N D R+F
Sbjct: 64 VDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDA 123
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
+ + T ASV+ GC G + +H L ++ ++ + +LV MY++CG
Sbjct: 124 RVSGSGMNSVTVASVLGGC---GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEW 180
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM-EVENVLPDSITFVGILKA 282
++ ++F+ V V +NA I+GL +G+ +VF+ M + + P+ +TFV + A
Sbjct: 181 VLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITA 240
Query: 283 CSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGT-MVDLLGRAGNLEEACNMIKAMPVEPD 340
C+ + GR+ H +M+ F + + GT ++D+ + + A + + +
Sbjct: 241 CASLLNLQYGRQLHGLVMKKEFQFETMV---GTALIDMYSKCRCWKSAYIVFTELKDTRN 297
Query: 341 VVIWRALLSACRIHGKKELA 360
++ W +++S I+G+ E A
Sbjct: 298 LISWNSVISGMMINGQHETA 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
P+ FTF ++ CA+LG + + +H +++ ++ + ALV MY K ++ + +V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 289
D + ++ NA ++GL +G DA +F V +S+T +L CG +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGG---CGDI 145
Query: 290 NEGRE-HFNIMQNRFLIQPQLEHY-GT-MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 346
G + H M++ F ++E Y GT +V + R G A M + +P VV + A
Sbjct: 146 EGGMQLHCLAMKSGF----EMEVYVGTSLVSMYSRCGEWVLAARMFEKVP-HKSVVTYNA 200
Query: 347 LLSACRIHG 355
+S +G
Sbjct: 201 FISGLMENG 209
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 175/332 (52%), Gaps = 4/332 (1%)
Query: 103 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
+DT + N +I K G D + +F++M RD+V+WN +I GY +NV L LF
Sbjct: 378 TLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEE 437
Query: 163 MLSAEVEP-DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 221
M V+ D FT S++ C+ GAL K +H +++ ++ ++ ALVDMY+KCG
Sbjct: 438 MKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCG 497
Query: 222 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
++ +++ FD+++ V W +I G HG A+ ++S + P+ + F+ +L
Sbjct: 498 YLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLS 557
Query: 282 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 341
+CSH G+V +G + F+ M F ++P EH +VDLL RA +E+A K P +
Sbjct: 558 SCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSI 617
Query: 342 VIWRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMM 398
+ +L ACR +GK E+ + ++ L+ GD +V L + + ++K W + N M
Sbjct: 618 DVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQM 677
Query: 399 KIGGVRKKRGKSWIELGDSIHQFNAADQSHAE 430
+ G++K G S IE+ F SH++
Sbjct: 678 RSLGLKKLPGWSKIEMNGKTTTFFMNHTSHSD 709
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 156/360 (43%), Gaps = 35/360 (9%)
Query: 4 ETRTMLIKLQRLIHGAIKFGSLSESWSIT--QRSSHSLTDHSVFHRVLQRSRASMDSTTA 61
E R M + +I G G++SE + R D F L S D
Sbjct: 206 EQRDM-VSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMG 264
Query: 62 AKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGE 121
H +++ G+ L ALI+ Y +C G+
Sbjct: 265 RMLHCQIVKTGFDVDMHLKTALITMYLKC-----------------------------GK 295
Query: 122 CDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTG 181
+ + +V + +P +DVV W +I G ++ R L +F ML + + ASVV
Sbjct: 296 EEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVAS 355
Query: 182 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 241
CA+LG+ VHG +L L+ +L+ MYAKCG +D S +F+ + + W
Sbjct: 356 CAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSW 415
Query: 242 NAMINGLAVHGLALDAIAVFSRMEVENVLP-DSITFVGILKACSHCGLVNEGREHFNIMQ 300
NA+I+G A + A+ +F M+ + V DS T V +L+ACS G + G+ I+
Sbjct: 416 NAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVI 475
Query: 301 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
F I+P +VD+ + G LE A ++ + DVV W L++ HGK ++A
Sbjct: 476 RSF-IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGFHGKGDIA 533
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 115/228 (50%), Gaps = 6/228 (2%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
A+ +FD+M RD+V+WNT+I GY + L+L M + PD TF + ++
Sbjct: 198 AKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGT 257
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 244
+ L + +H +++ ++ L AL+ MY KCG+ + S +V +T+ V W M
Sbjct: 258 MCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVM 317
Query: 245 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRF 303
I+GL G A A+ VFS M S ++ +C+ G + G H ++++ +
Sbjct: 318 ISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGY 377
Query: 304 -LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
L P L +++ + + G+L+++ + + M E D+V W A++S
Sbjct: 378 TLDTPALN---SLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISG 421
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 143/322 (44%), Gaps = 18/322 (5%)
Query: 58 STTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLM 117
ST ++ KL+ + T+PSL+ A S I V +++ FS + I S +
Sbjct: 32 STFSSMLANKLLPDTF-TFPSLLKACASLQRLSFGLSIHQQV---LVNGFSSDFYISSSL 87
Query: 118 -----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDG 172
K G ARKVF++M RDVV W +IG Y + + L M ++P
Sbjct: 88 VNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGP 147
Query: 173 FTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDT 232
T +++G + L + +H + + + +++++Y KC + +K +FD
Sbjct: 148 VTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQ 204
Query: 233 VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEG 292
+ + + WN MI+G A G + + + RM + + PD TF L + G
Sbjct: 205 MEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMG 264
Query: 293 RE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 351
R H I++ F + L+ ++ + + G E + +++ +P DVV W ++S
Sbjct: 265 RMLHCQIVKTGFDVDMHLK--TALITMYLKCGKEEASYRVLETIP-NKDVVCWTVMISGL 321
Query: 352 RIHGKKELAEFAIANISRLESG 373
G+ E A + + L+SG
Sbjct: 322 MRLGRAEKALIVFSEM--LQSG 341
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 40/228 (17%)
Query: 157 LRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDM 216
L F ML+ ++ PD FTF S++ CA L L +H +L ++ +S++LV++
Sbjct: 31 LSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNL 90
Query: 217 YAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
YAK G + +++VF+ + V W AMI + G+ +A ++ + M + + P +T
Sbjct: 91 YAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTL 150
Query: 277 VGILKA--------CSH------------------------CGLVNEGREHFNIMQNRFL 304
+ +L C H C V + ++ F+ M+ R +
Sbjct: 151 LEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDM 210
Query: 305 IQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLS 349
+ + TM+ GN+ E ++ M + PD + A LS
Sbjct: 211 VS-----WNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLS 253
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 54/203 (26%)
Query: 241 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC-------------- 286
+N+ IN L+ HG ++ FS M +LPD+ TF +LKAC+
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 287 ---------------------GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNL 325
GL+ R+ F M+ R ++ H+ M+ RAG +
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVV-----HWTAMIGCYSRAGIV 128
Query: 326 EEACNMIKAM---PVEPDVVIWRALLSAC-RIHGKKELAEFAI-----ANISRLESGDFV 376
EAC+++ M ++P V +LS I + L +FA+ +I+ + S
Sbjct: 129 GEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNS---- 184
Query: 377 LLSNMYCSLKNWHNAERVRNMMK 399
+ N+YC + +A+ + + M+
Sbjct: 185 -MLNLYCKCDHVGDAKDLFDQME 206
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 194/384 (50%), Gaps = 9/384 (2%)
Query: 63 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAH--HVFSRVMDTFSKNLVIESLMKAG 120
+ HA+++ +G + + + ++ Y +C A H+ + +S + +I G
Sbjct: 281 EVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQG 340
Query: 121 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDG-LRLFRGMLSAEVE-PDGFTFASV 178
+ A+++FD + +++V W + GY+ N+R D L L R ++ E PD SV
Sbjct: 341 KMVEAKRLFDSLSEKNLVVWTAMFLGYL-NLRQPDSVLELARAFIANETNTPDSLVMVSV 399
Query: 179 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 238
+ C+ + K +HG L + ++ L A VDMY+KCG ++ ++++FD+
Sbjct: 400 LGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDT 459
Query: 239 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 298
++NAMI G A HG + F M PD ITF+ +L AC H GLV EG ++F
Sbjct: 460 VMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKS 519
Query: 299 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM-PVEPDVVIWRALLSACRIHGKK 357
M + I P+ HY M+DL G+A L++A +++ + VE D VI A L+AC +
Sbjct: 520 MIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNT 579
Query: 358 ELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIEL 414
EL + + +E + ++ ++N Y S W +R+R+ M+ + G SW +
Sbjct: 580 ELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANI 639
Query: 415 GDSIHQFNAADQSHAEMKAIHRVL 438
H F ++D SH E +AI+ +L
Sbjct: 640 DKQFHMFTSSDISHYETEAIYAML 663
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 155/330 (46%), Gaps = 43/330 (13%)
Query: 65 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFS----RVMDTFSKNLVIESLMKAG 120
H L+ G V++LI Y++C + ++F+ +D+ ++N +I + + G
Sbjct: 148 HGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREG 207
Query: 121 ECDIARKVFDKMP-VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVV 179
+ D A VF + P + D ++WNTLI GY +N + L++ M ++ D +F +V+
Sbjct: 208 DIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVL 267
Query: 180 TGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV-------------- 225
+ L +L K VH +L+ N +S+ +VD+Y KCG +
Sbjct: 268 NVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLY 327
Query: 226 -----------------SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVEN 268
+K++FD+++ ++ VW AM G ++ D++ +R + N
Sbjct: 328 SASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGY-LNLRQPDSVLELARAFIAN 386
Query: 269 V--LPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNL 325
PDS+ V +L ACS + G+E H + ++ L+ +L VD+ + GN+
Sbjct: 387 ETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKL--VTAFVDMYSKCGNV 444
Query: 326 EEACNMIKAMPVEPDVVIWRALLSACRIHG 355
E A + + E D V++ A+++ C HG
Sbjct: 445 EYAERIFDS-SFERDTVMYNAMIAGCAHHG 473
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 142/341 (41%), Gaps = 80/341 (23%)
Query: 83 LISTYARCHQPHIAHHVFSRVMD--TFSKNLVIESLMKAGECDIARKVFDKMPV-RDVVT 139
L++ Y++ A +VF +++ +S N VI + +K AR++F+ RD++T
Sbjct: 29 LVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLIT 88
Query: 140 WNTLIGGYVKNVRFLDG-----LRLFRGMLSAEVEP---DGFTFASVVTGCARLGALCNA 191
+NTL+ G+ K DG + +F M E + D FT ++V A+L +
Sbjct: 89 YNTLLSGFAKT----DGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYG 144
Query: 192 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF--------DTVAR-------- 235
+ +HG++++ ++L+ MY+KCG+ +F D+VAR
Sbjct: 145 EQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYC 204
Query: 236 -------------------DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
D +S WN +I G A +G +A+ + ME + D +F
Sbjct: 205 REGDIDKALSVFWRNPELNDTIS-WNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSF 263
Query: 277 VGILKACSHCGLVNEGRE-HFNIMQ-----NRFLIQPQLEHY---GTM-----VDLLGRA 322
+L S + G+E H +++ N+F+ ++ Y G M LL
Sbjct: 264 GAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGF 323
Query: 323 GNLEEACNMIKAMP---------------VEPDVVIWRALL 348
GNL A +MI E ++V+W A+
Sbjct: 324 GNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMF 364
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 164/312 (52%), Gaps = 4/312 (1%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
+D +++++ G A K+F ++P +D++ ++ LI G VK+ LFR +
Sbjct: 375 LDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFREL 434
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
+ ++ D F ++++ C+ L +L K +HGL ++K + + + ALVDMY KCG I
Sbjct: 435 IKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEI 494
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
D +FD + V W +I G +G +A F +M + P+ +TF+G+L AC
Sbjct: 495 DNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSAC 554
Query: 284 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 343
H GL+ E R M++ + ++P LEHY +VDLLG+AG +EA +I MP+EPD I
Sbjct: 555 RHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTI 614
Query: 344 WRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKI 400
W +LL+AC H L + + D + LSN Y +L W +VR K
Sbjct: 615 WTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKK 674
Query: 401 GGVRKKRGKSWI 412
G K+ G SWI
Sbjct: 675 LGA-KESGMSWI 685
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 146/310 (47%), Gaps = 38/310 (12%)
Query: 92 QPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNV 151
Q H+ S+ + F N VI + A KVFD+M R++VTW T++ GY +
Sbjct: 28 QAHVIKQGISQ--NVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDG 85
Query: 152 RFLDGLRLFRGMLSAEVEP-DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS 210
+ + L+R ML +E E + F +++V+ C +G + V+ + ++ ++ + +L
Sbjct: 86 KPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLM 145
Query: 211 AALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL 270
++VDMY K GR+ + F + R + WN +I+G GL +A+ +F RM NV+
Sbjct: 146 NSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVV 205
Query: 271 --------------PDSITFV------GI----------LKACSHCGLVNEGRE-HFNIM 299
P ++ F+ G+ LKACS GL+ G++ H ++
Sbjct: 206 SWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVV 265
Query: 300 QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMI--KAMPVEPDVVIWRALLSACRIHGKK 357
++ P ++D+ G+L A ++ + + V V +W ++LS I+ +
Sbjct: 266 KSGLESSPF--AISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEEN 323
Query: 358 ELAEFAIANI 367
E A + + I
Sbjct: 324 EAALWLLLQI 333
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 146/318 (45%), Gaps = 27/318 (8%)
Query: 79 LVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGECDIARKVFDKMPVRD 136
L+ +++ Y + + A+ F ++ + S N +I KAG D A +F +MP +
Sbjct: 144 LMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPN 203
Query: 137 VVTWNTLIGGYV-----KNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA 191
VV+WN LI G+V + + FL +R+ R L DGF + C+ G L
Sbjct: 204 VVSWNCLISGFVDKGSPRALEFL--VRMQREGLVL----DGFALPCGLKACSFGGLLTMG 257
Query: 192 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF---DTVARDHVSVWNAMINGL 248
K +H +++ ++ + +AL+DMY+ CG + + VF V+VWN+M++G
Sbjct: 258 KQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGF 317
Query: 249 AVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQ 308
++ A+ + ++ ++ DS T G LK C +N + + ++
Sbjct: 318 LINEENEAALWLLLQIYQSDLCFDSYTLSGALKIC-----INYVNLRLGLQVHSLVVVSG 372
Query: 309 LE-HY---GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAI 364
E Y +VDL GN+++A + +P D++ + L+ C G LA +
Sbjct: 373 YELDYIVGSILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSGFNSLAFYLF 431
Query: 365 ANISRLE-SGDFVLLSNM 381
+ +L D ++SN+
Sbjct: 432 RELIKLGLDADQFIVSNI 449
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 136/363 (37%), Gaps = 70/363 (19%)
Query: 59 TTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMK 118
T + H ++ G + P ++ALI Y+ C A VF + + L + S
Sbjct: 255 TMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQ------EKLAVNS--- 305
Query: 119 AGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 178
V WN+++ G++ N L L + +++ D +T +
Sbjct: 306 -----------------SVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGA 348
Query: 179 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 238
+ C L VH L++ +L+YI+ + LVD++A G I + ++F + +
Sbjct: 349 LKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDI 408
Query: 239 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS-------------- 284
++ +I G G A +F + + D ILK CS
Sbjct: 409 IAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGL 468
Query: 285 ---------------------HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAG 323
CG ++ G F+ M R ++ + ++ G+ G
Sbjct: 469 CIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVS-----WTGIIVGFGQNG 523
Query: 324 NLEEACNMIKAM---PVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGDFVLLSN 380
+EEA M +EP+ V + LLSACR G E A + + + E G L +
Sbjct: 524 RVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETM-KSEYGLEPYLEH 582
Query: 381 MYC 383
YC
Sbjct: 583 YYC 585
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 92/214 (42%), Gaps = 32/214 (14%)
Query: 182 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 241
C ++ A + + ++++ + N ++ ++ MY + + +VFD ++ ++ W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 242 NAMINGLAVHGLALDAIAVFSRM-EVENVLPDSITFVGILKACSHCG------LVNE--G 292
M++G G AI ++ RM + E + + +LKAC G LV E G
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 293 REHFN---IMQN-------------------RFLIQPQLEHYGTMVDLLGRAGNLEEACN 330
+E+ ++ N + +++P + T++ +AG ++EA
Sbjct: 135 KENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVT 194
Query: 331 MIKAMPVEPDVVIWRALLSACRIHGKKELAEFAI 364
+ MP +P+VV W L+S G EF +
Sbjct: 195 LFHRMP-QPNVVSWNCLISGFVDKGSPRALEFLV 227
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 182/351 (51%), Gaps = 15/351 (4%)
Query: 73 YATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFS---KNLVIESLMKAGECDIARKVF 129
Y T+ SL++A R Q H + +V F ++ K+ AR+ F
Sbjct: 245 YFTFSSLLSA-----CRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECF 299
Query: 130 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 189
+ M VR+VV+WN +I G+ +N + +RLF ML ++PD TFASV++ CA+ A+
Sbjct: 300 ESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIW 359
Query: 190 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLA 249
K V ++ +K ++ +L+ Y++ G + + F ++ + W ++I LA
Sbjct: 360 EIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALA 419
Query: 250 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQL 309
HG A +++ +F M ++ + PD ITF+ +L ACSH GLV EG F M + I+ +
Sbjct: 420 SHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAED 478
Query: 310 EHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISR 369
EHY ++DLLGRAG ++EA +++ +MP EP A C IH K+E ++ +
Sbjct: 479 EHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLE 538
Query: 370 LESG---DFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKR-GKSWIELGD 416
+E ++ +LSN Y S +W+ A +R + K G SW LGD
Sbjct: 539 IEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSW--LGD 587
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 146/322 (45%), Gaps = 41/322 (12%)
Query: 41 DHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYAT--YPSLVAALISTYARCHQPHIAHH 98
DH F +++ S + + H ++ G + +PS +L+ Y +C A
Sbjct: 141 DHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPS--TSLVHFYGKCGLIVEARR 198
Query: 99 VFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLR 158
VF V+D RD+V WN L+ YV N +
Sbjct: 199 VFEAVLD-----------------------------RDLVLWNALVSSYVLNGMIDEAFG 229
Query: 159 LFRGMLSAE--VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDM 216
L + M S + D FTF+S+++ C + K +H ++ + + + ++ AL++M
Sbjct: 230 LLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNM 285
Query: 217 YAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
YAK + +++ F+++ +V WNAMI G A +G +A+ +F +M +EN+ PD +TF
Sbjct: 286 YAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTF 345
Query: 277 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP 336
+L +C+ + E ++ M + L +++ R GNL EA ++
Sbjct: 346 ASVLSSCAKFSAIWEIKQ-VQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR 404
Query: 337 VEPDVVIWRALLSACRIHGKKE 358
EPD+V W +++ A HG E
Sbjct: 405 -EPDLVSWTSVIGALASHGFAE 425
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 126/249 (50%), Gaps = 13/249 (5%)
Query: 107 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVK-----NVRFLDGLRLFR 161
F +N ++++ K E D A K+FD+MP+R++VTWN LI G ++ N R G
Sbjct: 72 FLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLS 131
Query: 162 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 221
+L +V D +F ++ C + +H LM+++ ++ + S +LV Y KCG
Sbjct: 132 RILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCG 191
Query: 222 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM--EVENVLPDSITFVGI 279
I +++VF+ V + +WNA+++ ++G+ +A + M + D TF +
Sbjct: 192 LIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSL 251
Query: 280 LKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEP 339
L AC + +G++ I+ + Q + ++++ ++ +L +A ++M V
Sbjct: 252 LSACR----IEQGKQIHAIL-FKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVR- 305
Query: 340 DVVIWRALL 348
+VV W A++
Sbjct: 306 NVVSWNAMI 314
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 29/189 (15%)
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 242
A L L + K HG M+++ + + L L+ Y K D + ++FD + ++ WN
Sbjct: 47 ASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWN 106
Query: 243 AMINGLA-----VHGLALDAIAVFSRMEVENVLPDSITFVGILKACS-----------HC 286
+I+G+ + A SR+ +V D ++F+G+++ C+ HC
Sbjct: 107 ILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHC 166
Query: 287 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 346
+V +G E ++V G+ G + EA + +A+ ++ D+V+W A
Sbjct: 167 LMVKQGLESSCFPST------------SLVHFYGKCGLIVEARRVFEAV-LDRDLVLWNA 213
Query: 347 LLSACRIHG 355
L+S+ ++G
Sbjct: 214 LVSSYVLNG 222
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 184 bits (468), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 167/309 (54%), Gaps = 3/309 (0%)
Query: 35 SSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPH 94
S S D F V++ AS + H I G+ L+ Y +C +P
Sbjct: 112 SHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPD 171
Query: 95 IAHHVFSRVM--DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVR 152
VF ++ S ++ L+ + D A VF++MP+R+VV+W +I YVKN R
Sbjct: 172 SGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRR 231
Query: 153 FLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAA 212
+ +LFR M +V+P+ FT +++ +LG+L +WVH + L+ L A
Sbjct: 232 PDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTA 291
Query: 213 LVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLP 271
L+DMY+KCG + +++VFD + ++ WN+MI L VHG +A+++F ME E +V P
Sbjct: 292 LIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEP 351
Query: 272 DSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM 331
D+ITFVG+L AC++ G V +G +F M + I P EH M+ LL +A +E+A N+
Sbjct: 352 DAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNL 411
Query: 332 IKAMPVEPD 340
+++M +PD
Sbjct: 412 VESMDSDPD 420
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 124/276 (44%), Gaps = 40/276 (14%)
Query: 120 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLF-RGMLSAEVEPDGFTFASV 178
GE A VF+++ TWN +I N + + L LF M+S + + D FTF V
Sbjct: 66 GETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFV 125
Query: 179 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 238
+ C ++ VHGL ++ + L+D+Y KCG+ D ++VFD + +
Sbjct: 126 IKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSI 185
Query: 239 SVWNAMINGLAVHGLALD--------------------------------AIAVFSRMEV 266
W M+ GL V LD A +F RM+V
Sbjct: 186 VSWTTMLYGL-VSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQV 244
Query: 267 ENVLPDSITFVGILKACSHCGLVNEGR-EHFNIMQNRFLIQPQLEHYGT-MVDLLGRAGN 324
++V P+ T V +L+A + G ++ GR H +N F++ L GT ++D+ + G+
Sbjct: 245 DDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFL---GTALIDMYSKCGS 301
Query: 325 LEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
L++A + M + + W +++++ +HG E A
Sbjct: 302 LQDARKVFDVMQGK-SLATWNSMITSLGVHGCGEEA 336
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 170/313 (54%), Gaps = 8/313 (2%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N +I + K G+ + A +F++ +++++WN +I G+ N +GL F +L +EV
Sbjct: 425 NALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVR 484
Query: 170 --PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 227
PD +T +++++ C +L H +L ++ AL++MY++CG I S
Sbjct: 485 ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSL 544
Query: 228 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKACSHC 286
+VF+ ++ V WN++I+ + HG +A+ + M+ E V+PD+ TF +L ACSH
Sbjct: 545 EVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHA 604
Query: 287 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIK--AMPVEPDVVIW 344
GLV EG E FN M + ++H+ +VDLLGRAG+L+EA +++K + V +W
Sbjct: 605 GLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVW 664
Query: 345 RALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIG 401
AL SAC HG +L + + E D +V LSN+Y W AE R + +
Sbjct: 665 WALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMI 724
Query: 402 GVRKKRGKSWIEL 414
G K+RG SW+ L
Sbjct: 725 GAMKQRGCSWMRL 737
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 167/385 (43%), Gaps = 38/385 (9%)
Query: 4 ETRTMLIKLQRLIHGAIKFGSLSESWSI---TQRSSHSLTDHSVFHRVLQRSRASMDSTT 60
E T L+ L R + G + G + + R + D + +R D+
Sbjct: 16 ENSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIF 75
Query: 61 AAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV--MDTFSKNLVIESLMK 118
+ H I G + + L+S Y R F + D +S ++ + K
Sbjct: 76 GGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFK 135
Query: 119 AGECDIARKVFDKMPVRD-VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
G+ + A +VFDKMP RD V WN +I G ++ + LFR M V D F FA+
Sbjct: 136 LGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFAT 195
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF---DTVA 234
+++ C G+L K VH L+++ + + AL+ MY C + + VF D
Sbjct: 196 ILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAV 254
Query: 235 RDHVSVWNAMINGLAVHGLALD-AIAVFSRMEVENVLPDSITFVGILKACS--------H 285
RD V+ +N +I+GLA G D ++ VF +M ++ P +TFV ++ +CS H
Sbjct: 255 RDQVT-FNVVIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVH 311
Query: 286 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
+ G E + ++ N + Y + D G A + E+ E D+V W
Sbjct: 312 GLAIKTGYEKYTLVSN-----ATMTMYSSFED-FGAAHKVFESLE-------EKDLVTWN 358
Query: 346 ALLSACRIHGKKELAEFAIANISRL 370
++S+ + + +L + A++ R+
Sbjct: 359 TMISS---YNQAKLGKSAMSVYKRM 380
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 123/239 (51%), Gaps = 9/239 (3%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
A KVF+ + +D+VTWNT+I Y + + +++ M V+PD FTF S++
Sbjct: 342 AHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLD 401
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 244
L L + V +++ + +S AL+ Y+K G+I+ + +F+ R ++ WNA+
Sbjct: 402 LDVL---EMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAI 458
Query: 245 INGLAVHGLALDAIAVFS-RMEVE-NVLPDSITFVGILKAC-SHCGLVNEGREHFNIMQN 301
I+G +G + + FS +E E +LPD+ T +L C S L+ + H ++++
Sbjct: 459 ISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRH 518
Query: 302 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
+ + + ++++ + G ++ + + M E DVV W +L+SA HG+ E A
Sbjct: 519 GQFKETLIGN--ALINMYSQCGTIQNSLEVFNQMS-EKDVVSWNSLISAYSRHGEGENA 574
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 130/290 (44%), Gaps = 40/290 (13%)
Query: 63 KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC 122
+ H+ +I G+ S+V ALI+ Y C +V+++ + E
Sbjct: 210 QVHSLVIKAGFFIASSVVNALITMYFNCQ-------------------VVVDACLVFEET 250
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
D+A VRD VT+N +I G + + + L +FR ML A + P TF SV+ C
Sbjct: 251 DVA--------VRDQVTFNVVIDG-LAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSC 301
Query: 183 ARLGALCNA--KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 240
+ C A VHGL ++ + ++S A + MY+ + +VF+++ +
Sbjct: 302 S-----CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVT 356
Query: 241 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 300
WN MI+ L A++V+ RM + V PD TF +L ++ E
Sbjct: 357 WNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVL----EMVQACI 412
Query: 301 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
+F + ++E ++ + G +E+A +++ + +++ W A++S
Sbjct: 413 IKFGLSSKIEISNALISAYSKNGQIEKA-DLLFERSLRKNLISWNAIISG 461
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 114/284 (40%), Gaps = 37/284 (13%)
Query: 17 HGAIKFGSLSESWSITQRSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATY 76
H F L + + L D +L ++ ++THA ++ HG
Sbjct: 464 HNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKE 523
Query: 77 PSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRD 136
+ ALI+ Y++C G + +VF++M +D
Sbjct: 524 TLIGNALINMYSQC-----------------------------GTIQNSLEVFNQMSEKD 554
Query: 137 VVTWNTLIGGYVKNVRFLDGLRLFRGML-SAEVEPDGFTFASVVTGCARLGALCNAKWVH 195
VV+WN+LI Y ++ + + ++ M +V PD TF++V++ C+ G + +
Sbjct: 555 VVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIF 614
Query: 196 GLMLE-KRVKLNYILSAALVDMYAKCGRIDVSK---QVFDTVARDHVSVWNAMINGLAVH 251
M+E V N + LVD+ + G +D ++ ++ + V VW A+ + A H
Sbjct: 615 NSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAH 674
Query: 252 G-LALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE 294
G L L + ME E D +V + + G+ E E
Sbjct: 675 GDLKLGKMVAKLLMEKEK--DDPSVYVQLSNIYAGAGMWKEAEE 716
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 193/381 (50%), Gaps = 28/381 (7%)
Query: 82 ALISTYARCHQPHIAHHVFSRVMDT------FSKNLVIESLMKAGECDIARKVFDKMP-- 133
++I+ Y + A+ +F+R+ D + N +I +K G+ A +F +M
Sbjct: 423 SMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKD 482
Query: 134 ---VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCN 190
R+ TWN +I GY++N + + L LFR M + P+ T S++ CA L
Sbjct: 483 GKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKM 542
Query: 191 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAV 250
+ +HG +L + + + + AL D YAK G I+ S+ +F + + WN++I G +
Sbjct: 543 VREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVL 602
Query: 251 HGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLE 310
HG A+A+F++M+ + + P+ T I+ A G V+EG++ F + N + I P LE
Sbjct: 603 HGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALE 662
Query: 311 HYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRL 370
H MV L GRA LEEA I+ M ++ + IW + L+ CRIHG ++A A N+ L
Sbjct: 663 HCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSL 722
Query: 371 ESGDFV---LLSNMYC-------SLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQ 420
E + ++S +Y SL+ N R N++K K G+SWIE+ + IH
Sbjct: 723 EPENTATESIVSQIYALGAKLGRSLEG--NKPRRDNLLK-----KPLGQSWIEVRNLIHT 775
Query: 421 FNAADQSHAEMKAIHRVLEGL 441
F DQS ++ ++E +
Sbjct: 776 FTTGDQSKLCTDVLYPLVEKM 796
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 151/357 (42%), Gaps = 44/357 (12%)
Query: 39 LTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHH 98
L D +F ++LQ D H+ +I G ++ + ++++ YA+C + A
Sbjct: 178 LPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATK 237
Query: 99 VFSRVMD-------------------------------------TFSKNLVIESLMKAGE 121
F R+ + + N++I + G+
Sbjct: 238 FFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGK 297
Query: 122 CDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
CD A + KM DV TW +I G + N L +FR M A V P+ T S
Sbjct: 298 CDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMS 357
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 237
V+ C+ L + VH + ++ + ++ +LVDMY+KCG+++ +++VFD+V
Sbjct: 358 AVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKD 417
Query: 238 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 297
V WN+MI G G A +F+RM+ N+ P+ IT+ ++ G E + F
Sbjct: 418 VYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQ 477
Query: 298 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE---PDVVIWRALLSAC 351
M+ +Q + ++ + G +EA + + M P+ V +LL AC
Sbjct: 478 RMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 134/283 (47%), Gaps = 7/283 (2%)
Query: 74 ATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGECDIARKVFDK 131
+TY L+ + I + H I H F D F + ++ K G ARKVFD
Sbjct: 82 STYLKLLESCIDS-GSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDS 140
Query: 132 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA 191
M R++ TW+ +IG Y + R+ + +LFR M+ V PD F F ++ GCA G +
Sbjct: 141 MRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAG 200
Query: 192 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH 251
K +H ++++ + +S +++ +YAKCG +D + + F + V WN+++ +
Sbjct: 201 KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQN 260
Query: 252 GLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEH 311
G +A+ + ME E + P +T+ ++ + G + + M+ F I +
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMET-FGITADVFT 319
Query: 312 YGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSAC 351
+ M+ L G +A +M + M V P+ V + +SAC
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSAC 362
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 169/299 (56%), Gaps = 12/299 (4%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D + N ++ K G+ AR VFD +P +D V+WN+++ GY+ + + L +FR M+
Sbjct: 229 DVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMV 288
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
+EPD +SV+ AR+ + + + +HG ++ + ++ ++ AL+ +Y+K G++
Sbjct: 289 QNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLG 345
Query: 225 VSKQVFDT-VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
+ +FD + RD VS WNA+I + H + + F +M N PD ITFV +L C
Sbjct: 346 QACFIFDQMLERDTVS-WNAII---SAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLC 401
Query: 284 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMI-KAMPVEPDVV 342
++ G+V +G F++M + I P++EHY MV+L GRAG +EEA +MI + M +E
Sbjct: 402 ANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPT 461
Query: 343 IWRALLSACRIHGKKELAEFAIANISRLESG---DFVLLSNMYCSLKNWHNAERVRNMM 398
+W ALL AC +HG ++ E A + LE +F LL +Y K + ERVR MM
Sbjct: 462 VWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMM 520
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 143/287 (49%), Gaps = 19/287 (6%)
Query: 75 TYPSLVAALIST-YARCHQPH--IAHHVFSRVMDTFSKNLVIESLM-----KAGECDIAR 126
T P + A+L+ T Y+ H HH+ + NL I S + G ++A
Sbjct: 90 TEPEIFASLLETCYSLRAIDHGVRVHHLIPPYL--LRNNLGISSKLVRLYASCGYAEVAH 147
Query: 127 KVFDKMPVRD--VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
+VFD+M RD WN+LI GY + ++ D + L+ M V+PD FTF V+ C
Sbjct: 148 EVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGG 207
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNA 243
+G++ + +H ++++ + + ALV MYAKCG I ++ VFD + +D+VS WN+
Sbjct: 208 IGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVS-WNS 266
Query: 244 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 303
M+ G HGL +A+ +F M + PD + +L + GR+ + R
Sbjct: 267 MLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRG 323
Query: 304 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
+ + +L ++ L + G L +AC + M +E D V W A++SA
Sbjct: 324 M-EWELSVANALIVLYSKRGQLGQACFIFDQM-LERDTVSWNAIISA 368
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 186/342 (54%), Gaps = 6/342 (1%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N ++++ + + D A V M RD +T+ +L+ + + + L + M +
Sbjct: 466 NSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIR 525
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
D + ++ A LGAL K +H ++ + +LVDMY+KCG ++ +K+V
Sbjct: 526 MDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKV 585
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 289
F+ +A V WN +++GLA +G A++ F M ++ PDS+TF+ +L ACS+ L
Sbjct: 586 FEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLT 645
Query: 290 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLS 349
+ G E+F +M+ + I+PQ+EHY +V +LGRAG LEEA +++ M ++P+ +I++ LL
Sbjct: 646 DLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLR 705
Query: 350 ACRIHGKKELAEFAIAN----ISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRK 405
ACR G L E +AN ++ + ++LL+++Y A++ RN+M + K
Sbjct: 706 ACRYRGNLSLGE-DMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSK 764
Query: 406 KRGKSWIELGDSIHQFNAADQSHAE-MKAIHRVLEGLIQRAK 446
K GKS +E+ +H F + D + + I+ +E + + K
Sbjct: 765 KLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIK 806
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 115/226 (50%), Gaps = 3/226 (1%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
ARK+FD+M R V W +I + K+ F L LF M+++ P+ FTF+SVV CA
Sbjct: 77 ARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAG 136
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 244
L + VHG +++ + N ++ ++L D+Y+KCG+ + ++F ++ W M
Sbjct: 137 LRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMM 196
Query: 245 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 304
I+ L +A+ +S M V P+ TFV +L A S GL H NI+
Sbjct: 197 ISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIP 256
Query: 305 IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
+ L+ ++VD + +E+A ++ + E DV +W +++S
Sbjct: 257 LNVVLKT--SLVDFYSQFSKMEDAVRVLNSSG-EQDVFLWTSVVSG 299
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 120/237 (50%), Gaps = 3/237 (1%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
A +V + +DV W +++ G+V+N+R + + F M S ++P+ FT++++++ C+
Sbjct: 278 AVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSA 337
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV-SKQVFDTVARDHVSVWNA 243
+ +L K +H ++ + + + ALVDMY KC +V + +VF + +V W
Sbjct: 338 VRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTT 397
Query: 244 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 303
+I GL HG D + M V P+ +T G+L+ACS V E + R
Sbjct: 398 LILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH 457
Query: 304 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
+ ++ ++VD + ++ A N+I++M D + + +L++ GK E+A
Sbjct: 458 -VDGEMVVGNSLVDAYASSRKVDYAWNVIRSMK-RRDNITYTSLVTRFNELGKHEMA 512
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 119/240 (49%), Gaps = 6/240 (2%)
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
K G+ A ++F + D ++W +I V ++ + L+ + M+ A V P+ FTF
Sbjct: 171 KCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVK 230
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 237
++ + LG L K +H ++ + + LN +L +LVD Y++ +++ + +V ++
Sbjct: 231 LLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQD 289
Query: 238 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HF 296
V +W ++++G + A +A+ F M + P++ T+ IL CS ++ G++ H
Sbjct: 290 VFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHS 349
Query: 297 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLE-EACNMIKAMPVEPDVVIWRALLSACRIHG 355
++ F + + +VD+ + E EA + AM V P+VV W L+ HG
Sbjct: 350 QTIKVGF--EDSTDVGNALVDMYMKCSASEVEASRVFGAM-VSPNVVSWTTLILGLVDHG 406
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 120/250 (48%), Gaps = 9/250 (3%)
Query: 110 NLVIESLMKAGECDI-ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV 168
N +++ MK ++ A +VF M +VV+W TLI G V + D L M+ EV
Sbjct: 364 NALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV 423
Query: 169 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 228
EP+ T + V+ C++L + +H +L + V ++ +LVD YA ++D +
Sbjct: 424 EPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWN 483
Query: 229 VFDTVARDHVSVWNAMI---NGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 285
V ++ R + +++ N L H +AL +V + M + + D ++ G + A ++
Sbjct: 484 VIRSMKRRDNITYTSLVTRFNELGKHEMAL---SVINYMYGDGIRMDQLSLPGFISASAN 540
Query: 286 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
G + G+ H + + ++VD+ + G+LE+A + + + PDVV W
Sbjct: 541 LGALETGK-HLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT-PDVVSWN 598
Query: 346 ALLSACRIHG 355
L+S +G
Sbjct: 599 GLVSGLASNG 608
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 80/176 (45%), Gaps = 10/176 (5%)
Query: 182 CARLGALCNAKW------VHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR 235
C R+ + C + +H +++ + N L L+ +Y K I ++++FD ++
Sbjct: 27 CIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSH 86
Query: 236 DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE-GRE 294
V W MI+ A+++F M P+ TF ++++C+ ++ GR
Sbjct: 87 RTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRV 146
Query: 295 HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
H ++++ F + ++ DL + G +EAC + ++ D + W ++S+
Sbjct: 147 HGSVIKTGFEGNSVVG--SSLSDLYSKCGQFKEACELFSSLQ-NADTISWTMMISS 199
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 180/363 (49%), Gaps = 8/363 (2%)
Query: 65 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGEC 122
H + I HG + +L+ Y C +A +F + D S N +I +++ G+
Sbjct: 141 HGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDV 200
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
A K+FD+MP +++++WN +I Y+ + LFR M+ A + + T ++ C
Sbjct: 201 LAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNAC 260
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 242
R L + VH ++ + + ++ AL+DMY KC + +++++FD+++ + WN
Sbjct: 261 GRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWN 320
Query: 243 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 302
MI +HG + +F M + PD +TFVG+L C+ GLV++G+ ++++M +
Sbjct: 321 VMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDE 380
Query: 303 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSACRIHGKKEL 359
F I+P H M +L AG EEA +K +P V P+ W LLS+ R G L
Sbjct: 381 FQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTL 440
Query: 360 AEF---AIANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGD 416
E ++ L + LL N+Y W + RVR M+K + + G ++L +
Sbjct: 441 GESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKE 500
Query: 417 SIH 419
+H
Sbjct: 501 IVH 503
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 113/272 (41%), Gaps = 39/272 (14%)
Query: 141 NTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLE 200
N + Y+ + L + +L PD +TF S+++ + + + K HG ++
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 201 KRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAV 260
+ +L+ MY CG +D++K++F + + + WN++I G+ +G L A +
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 261 FSRMEVENVLPDSI-------------------------------TFVGILKACSHCGLV 289
F M +N++ +I T V +L AC +
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 290 NEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 348
EGR H +++ R + + ++D+ G+ + A + ++ + + V W ++
Sbjct: 267 KEGRSVHASLI--RTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIR-NKVTWNVMI 323
Query: 349 SACRIHGKK----ELAEFAIANISRLESGDFV 376
A +HG+ EL E I + R + FV
Sbjct: 324 LAHCLHGRPEGGLELFEAMINGMLRPDEVTFV 355
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 175/342 (51%), Gaps = 15/342 (4%)
Query: 77 PSLVAALISTYARCHQPHIAHHVF--SRVMDTFSKNLVIESLMKAGECDIARKVFDKMPV 134
PSL+ S +A C + ++ H + +++ +S+ + I S A VF+ +
Sbjct: 220 PSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIAS---------ACSVFNSISE 270
Query: 135 RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWV 194
D+V ++LI GY + + L LF + + +PD A V+ CA L + K V
Sbjct: 271 PDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEV 330
Query: 195 HGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLA 254
H ++ ++L+ + +AL+DMY+KCG + + +F + ++ +N++I GL +HG A
Sbjct: 331 HSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFA 390
Query: 255 LDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGT 314
A F+ + ++PD ITF +L C H GL+N+G+E F M++ F I+PQ EHY
Sbjct: 391 STAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVY 450
Query: 315 MVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISR----L 370
MV L+G AG LEEA + ++ D I ALLS C +H LAE NI +
Sbjct: 451 MVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEER 510
Query: 371 ESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWI 412
S V+LSN+Y W ER+R+ + K G SW
Sbjct: 511 RSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISWF 552
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 110/230 (47%), Gaps = 10/230 (4%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
ARK+FD P R V WN++I Y K +F L LF +L ++ PD FT+A + G +
Sbjct: 59 ARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSE 118
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 244
+ +HG+ + + + I +A+V Y+K G I + ++F ++ +++WN M
Sbjct: 119 SFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVM 178
Query: 245 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 304
I G G I +F+ M+ P+ T V + GL++ + F
Sbjct: 179 ILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTS-----GLIDPSLLLVAWSVHAFC 233
Query: 305 IQPQLEHYG----TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
++ L+ + +V++ R + AC++ ++ EPD+V +L++
Sbjct: 234 LKINLDSHSYVGCALVNMYSRCMCIASACSVFNSIS-EPDLVACSSLITG 282
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 123/253 (48%), Gaps = 4/253 (1%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
D + ++++ KAG A K+F +P D+ WN +I GY + G+ LF M
Sbjct: 139 FDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLM 198
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRI 223
+P+ +T ++ +G L A VH L+ + + + ALV+MY++C I
Sbjct: 199 QHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCI 258
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
+ VF++++ + +++I G + G +A+ +F+ + + PD + +L +C
Sbjct: 259 ASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSC 318
Query: 284 SHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 342
+ G+E H ++ R ++ ++ ++D+ + G L+ A ++ +P E ++V
Sbjct: 319 AELSDSVSGKEVHSYVI--RLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKNIV 375
Query: 343 IWRALLSACRIHG 355
+ +L+ +HG
Sbjct: 376 SFNSLILGLGLHG 388
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 168/317 (52%), Gaps = 7/317 (2%)
Query: 102 RVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR 161
R +DT +N +I + + + A KVF + ++ +WN +I +N + +LFR
Sbjct: 612 RELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFR 671
Query: 162 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 221
+ ++EP+ TF +++ +LG+ H ++ + + N +SAALVDMY+ CG
Sbjct: 672 NL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCG 728
Query: 222 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL-PDSITFVGIL 280
++ +VF + +S WN++I+ HG+ A+ +F + + + P+ +F+ +L
Sbjct: 729 MLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLL 788
Query: 281 KACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD 340
ACSH G ++EG ++ M+ +F ++P EH +VD+LGRAG L EA I +
Sbjct: 789 SACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQK 848
Query: 341 VVIWRALLSACRIHGKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNM 397
+W ALLSAC HG +L + + +E + ++ L+N Y L W A R+R M
Sbjct: 849 AGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKM 908
Query: 398 MKIGGVRKKRGKSWIEL 414
++ ++K G S I++
Sbjct: 909 VEDNALKKLPGYSVIDV 925
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 119/235 (50%), Gaps = 6/235 (2%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
A VF M RD+V+WNT++ + N L+ F+ M + E D TF+ V++ C+
Sbjct: 242 AECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSS 301
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSA--ALVDMYAKCGRIDVSKQVFDT-VARDHVSVW 241
+ L + +HGL+++ +S +++ MY+KCG + ++ VF+ V RD +S
Sbjct: 302 IEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISS- 360
Query: 242 NAMINGLAVHGLALDAIAVFSRME-VENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 300
NA++NG A +G+ +A + ++M+ V+ + PD T V I C EGR
Sbjct: 361 NAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTV 420
Query: 301 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
+ LE +++D+ G+ G +A + K D+V W +++SA +G
Sbjct: 421 RMEMQSRALEVINSVIDMYGKCGLTTQAELLFKT-TTHRDLVSWNSMISAFSQNG 474
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 9/248 (3%)
Query: 116 LMKAGECDIARKVFDKMP-VRDVVTWNTLIGGYVKNVRFLDGLRLFRGML-SAEVEPDGF 173
L K G+ A + M RD+ +WN++I G + L+ LR F+ M ++ D
Sbjct: 523 LQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLI 582
Query: 174 TFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV 233
T ++ LG + + HGL ++ +L+ L L+ MY +C I+ + +VF +
Sbjct: 583 TLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLI 642
Query: 234 ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGR 293
+ ++ WN +I+ L+ + + +F +++E P+ ITFVG+L A + G + G
Sbjct: 643 SDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGM 699
Query: 294 E-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACR 352
+ H ++++ F P + +VD+ G LE + + V + W +++SA
Sbjct: 700 QAHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMKVFRNSGVN-SISAWNSVISAHG 756
Query: 353 IHGKKELA 360
HG E A
Sbjct: 757 FHGMGEKA 764
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 106/250 (42%), Gaps = 24/250 (9%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-V 168
N +I K G+ + A VF+++ RDV++ N ++ G+ N F + + M S + +
Sbjct: 330 NSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKI 389
Query: 169 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYI-LSAALVDMYAKCGRIDVSK 227
+PD T S+ + C L + VHG + ++ + + +++DMY KCG ++
Sbjct: 390 QPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAE 449
Query: 228 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLP--DSITFVGILKACSH 285
+F T + WN+MI+ + +G A +F + E T + IL +C
Sbjct: 450 LLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDS 509
Query: 286 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
+ G+ +Q + G+L A ++ M D+ W
Sbjct: 510 SDSLIFGKSVHCWLQ--------------------KLGDLTSAFLRLETMSETRDLTSWN 549
Query: 346 ALLSACRIHG 355
+++S C G
Sbjct: 550 SVISGCASSG 559
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 114/250 (45%), Gaps = 3/250 (1%)
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
+ GE + +FD++ +DV+ WN++I +N R++ + LF M+ E D T
Sbjct: 134 RTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLL 193
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 237
+ + L +H L +E + + L AL+++YAK + ++ VF +
Sbjct: 194 AASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRD 253
Query: 238 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HF 296
+ WN ++ +G ++ F M D++TF ++ ACS + G H
Sbjct: 254 IVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHG 313
Query: 297 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
++++ + + + +++ + + G+ E A + + + V DV+ A+L+ +G
Sbjct: 314 LVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL-VCRDVISSNAILNGFAANGM 372
Query: 357 KELAEFAIAN 366
E A F I N
Sbjct: 373 FEEA-FGILN 381
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 161/300 (53%), Gaps = 5/300 (1%)
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
+ G ++R +F+ VRDVV W+++I GY + + + L M +E + T +
Sbjct: 299 RCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLA 358
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 237
+V+ C L A VH +L+ + +L AL+DMYAKCG + +++VF +
Sbjct: 359 IVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKD 418
Query: 238 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 297
+ W++MIN +HG +A+ +F M D + F+ IL AC+H GLV E + F
Sbjct: 419 LVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT 478
Query: 298 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKK 357
++ + LEHY ++LLGR G +++A + MP++P IW +LLSAC HG+
Sbjct: 479 -QAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRL 537
Query: 358 ELAEFAIAN-ISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIE 413
++A IAN + + E ++VLLS ++ N+H AE VR +M+ + K G S IE
Sbjct: 538 DVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 149/305 (48%), Gaps = 13/305 (4%)
Query: 61 AAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVF-------SRVMDT-FSKNLV 112
A K ++ +G+ LVA+L++ R +F R+ ++ +
Sbjct: 132 AMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTAL 191
Query: 113 IESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDG 172
++ +K + A VFD+M V++ V+W +I G V N + G+ LFR M + P+
Sbjct: 192 VDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNR 251
Query: 173 FTFASVVTGCARLGALCN-AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 231
T SV+ C L + K +HG + L+AA + MY +CG + +S+ +F+
Sbjct: 252 VTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFE 311
Query: 232 TVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 291
T V +W++MI+G A G + + + ++M E + +S+T + I+ AC++ L++
Sbjct: 312 TSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSF 371
Query: 292 GRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
H I++ F+ L + ++D+ + G+L A + + E D+V W ++++A
Sbjct: 372 ASTVHSQILKCGFMSHILLGN--ALIDMYAKCGSLSAAREVFYEL-TEKDLVSWSSMINA 428
Query: 351 CRIHG 355
+HG
Sbjct: 429 YGLHG 433
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 114/248 (45%), Gaps = 3/248 (1%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
DT N +I K RKVFD+M RD V++ ++I ++ + ++L + M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 165 SAEVEPDGFTFASVVTGCARLGALCN-AKWVHGLML-EKRVKLNYILSAALVDMYAKCGR 222
P AS++ C R+G+ A+ H L+L ++R++ + +LS ALVDMY K
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDD 200
Query: 223 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
+ VFD + + W AMI+G + + +F M+ EN+ P+ +T + +L A
Sbjct: 201 HAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPA 260
Query: 283 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 342
C + + + R + + R GN+ + + + V DVV
Sbjct: 261 CVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVR-DVV 319
Query: 343 IWRALLSA 350
+W +++S
Sbjct: 320 MWSSMISG 327
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N +I+ K G AR+VF ++ +D+V+W+++I Y + + L +F+GM+ E
Sbjct: 392 NALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHE 451
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
D F ++++ C G + A+ + + + + A +++ + G+ID + +V
Sbjct: 452 VDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEV 511
Query: 230 -FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDS-ITFVGILKACSHCG 287
+ + +W+++++ HG LD E+ PD+ +V + K + G
Sbjct: 512 TINMPMKPSARIWSSLLSACETHG-RLDVAGKIIANELMKSEPDNPANYVLLSKIHTESG 570
Query: 288 LVNEGREHFNIMQNRFL--------IQPQLE 310
+ E +MQ R L I+P+L+
Sbjct: 571 NYHAAEEVRRVMQRRKLNKCYGFSKIEPELQ 601
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 104/233 (44%), Gaps = 30/233 (12%)
Query: 144 IGGYVKNVRFLDGLRLFRGMLSAEVEPDGFT--FASVVTGCA------RLGALCNAKWVH 195
+ G V + + + LRL++ + + + +GFT SV+ CA LGA +H
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHS-LGTNGFTAILPSVIKACAFQQEPFLLGA-----QLH 70
Query: 196 GLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVWNAMINGLAVHGLA 254
L L+ + ++S +L+ MYAK R ++VFD + RD VS + ++IN GL
Sbjct: 71 CLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVS-YCSIINSCCQDGLL 129
Query: 255 LDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI-------MQNRFLIQP 307
+A+ + M +P S +L C+ G ++ F+ MQ L+
Sbjct: 130 YEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLST 189
Query: 308 QLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
L VD+ + + A ++ M V+ +V W A++S C + E+
Sbjct: 190 AL------VDMYLKFDDHAAAFHVFDQMEVKNEVS-WTAMISGCVANQNYEMG 235
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 188/383 (49%), Gaps = 17/383 (4%)
Query: 39 LTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHH 98
+ D F+ + Q D+ A + + +HG + ++ T A C
Sbjct: 464 IKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSC 523
Query: 99 VFSRVM------DTFSKNLVIESLMKAGECDIARKVFDKMPV-RDVVTWNTLIGGYVKNV 151
V+ +++ + + +I K A +FDK + V+WN ++ GY+ +
Sbjct: 524 VYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHG 583
Query: 152 RFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSA 211
+ + + FR M + +P+ TF ++V A L AL VH +++ +
Sbjct: 584 QAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGN 643
Query: 212 ALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLP 271
+LVDMYAKCG I+ S++ F ++ ++ WN M++ A HGLA A+++F M+ + P
Sbjct: 644 SLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKP 703
Query: 272 DSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM 331
DS++F+ +L AC H GLV EG+ F M R I+ ++EHY MVDLLG+AG EA M
Sbjct: 704 DSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEM 763
Query: 332 IKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGDFVLLSNMYCSLKNWHNA 391
++ M V+ V +W ALL++ R+H L+ A+ + +LE + ++
Sbjct: 764 MRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEP----------LNPSHYSQD 813
Query: 392 ERVRNMMKIGGVRKKRGKSWIEL 414
R+ + + ++K SWIE+
Sbjct: 814 RRLGEVNNVSRIKKVPACSWIEV 836
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 128/259 (49%), Gaps = 6/259 (2%)
Query: 118 KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
K GE +IA ++F + RDVV+W+ +I Y + + + + LFR M+ ++P+ T S
Sbjct: 347 KCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTS 406
Query: 178 VVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH 237
V+ GCA + A K +H ++ ++ + A++ MYAKCGR + + F+ +
Sbjct: 407 VLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKD 466
Query: 238 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF- 296
+NA+ G G A A V+ M++ V PDS T VG+L+ C+ C G +
Sbjct: 467 AVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYG 526
Query: 297 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
I+++ F + + H ++++ + L A + E V W +++ +HG+
Sbjct: 527 QIIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQ 584
Query: 357 KELAEFAIANISRLESGDF 375
AE A+A +++ F
Sbjct: 585 ---AEEAVATFRQMKVEKF 600
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 126/256 (49%), Gaps = 4/256 (1%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D + ++E KA + AR+VFDKM V+DVVTWNT++ G +N L LF M
Sbjct: 134 DVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMR 193
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
S V+ D + +++ ++L + +HGL+++K + S+ L+DMY C +
Sbjct: 194 SCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKK--GFIFAFSSGLIDMYCNCADLY 251
Query: 225 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
++ VF+ V R S W M+ A +G + + +F M +V + + L+A +
Sbjct: 252 AAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAA 311
Query: 285 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 344
+ G + +G + + LI + +++ + + G LE A + + + DVV W
Sbjct: 312 YVGDLVKGIAIHDYAVQQGLI-GDVSVATSLMSMYSKCGELEIAEQLFINIE-DRDVVSW 369
Query: 345 RALLSACRIHGKKELA 360
A++++ G+ + A
Sbjct: 370 SAMIASYEQAGQHDEA 385
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 3/164 (1%)
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE--VEPDGFTFASVVT 180
D++R +FD + VV WN++I GY + + L F G +S E ++PD ++F +
Sbjct: 50 DLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFF-GYMSEEKGIDPDKYSFTFALK 108
Query: 181 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 240
CA +H L+ E ++ + + ALV+MY K + ++QVFD + V
Sbjct: 109 ACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVT 168
Query: 241 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
WN M++GLA +G + A+ +F M V D ++ ++ A S
Sbjct: 169 WNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVS 212
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 110/223 (49%), Gaps = 2/223 (0%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
A VF+++ +D +W T++ Y N F + L LF M + +V + AS + A
Sbjct: 253 AESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAY 312
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAM 244
+G L +H +++ + + ++ +L+ MY+KCG +++++Q+F + V W+AM
Sbjct: 313 VGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAM 372
Query: 245 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 304
I G +AI++F M ++ P+++T +L+ C+ G+ + +
Sbjct: 373 IASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKS-IHCYAIKAD 431
Query: 305 IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRAL 347
I+ +LE ++ + + G A + +P++ D V + AL
Sbjct: 432 IESELETATAVISMYAKCGRFSPALKAFERLPIK-DAVAFNAL 473
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 213 LVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM-EVENVLP 271
L++ Y+ R D+S+ +FD+V V +WN+MI G GL +A+ F M E + + P
Sbjct: 39 LINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDP 98
Query: 272 DSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM 331
D +F LKAC+ +G +++ L + + +V++ +A +L A +
Sbjct: 99 DKYSFTFALKACAGSMDFKKGLRIHDLIAEMGL-ESDVYIGTALVEMYCKARDLVSARQV 157
Query: 332 IKAMPVEPDVVIWRALLSACRIHG 355
M V+ DVV W ++S +G
Sbjct: 158 FDKMHVK-DVVTWNTMVSGLAQNG 180
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 178/321 (55%), Gaps = 17/321 (5%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
DT + N +I++ +K+G+ + A +V MP + +WNT++ GYV + + + F M
Sbjct: 253 DTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMH 312
Query: 165 SAEVEPDGFTFA-----SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK 219
S+ V D ++ + G+L +A H L L+ RV ++++AL+DMY+K
Sbjct: 313 SSGVRFDEYSLSIVLAAVAALAVVPWGSLIHAC-AHKLGLDSRV----VVASALIDMYSK 367
Query: 220 CGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL-PDSITFVG 278
CG + ++ +F T+ R ++ VWN MI+G A +G +++AI +F++++ E L PD TF+
Sbjct: 368 CGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLN 427
Query: 279 ILKACSHCGLVNEGR-EHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV 337
+L CSHC + E +F +M N + I+P +EH +++ +G+ G + +A +I+
Sbjct: 428 LLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGF 487
Query: 338 EPDVVIWRALLSACRIHGKKELAEFAIANISRLESGD-----FVLLSNMYCSLKNWHNAE 392
D V WRALL AC + A+ A + L D ++++SN+Y + W
Sbjct: 488 GYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVG 547
Query: 393 RVRNMMKIGGVRKKRGKSWIE 413
++R +M+ GV K+ G SWI+
Sbjct: 548 QIRKIMRESGVLKEVGSSWID 568
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 126/268 (47%), Gaps = 54/268 (20%)
Query: 90 CHQPH--IAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGY 147
C Q H + H F V +T N ++ + + A KVFD+MP DV++WN+L+ GY
Sbjct: 74 CRQLHGYVTKHGF--VSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGY 131
Query: 148 VKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR-----LGALCNAKWVHGLMLEKR 202
V++ RF +G+ LF + ++V P+ F+F + + CAR LGA ++K V L LEK
Sbjct: 132 VQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVK-LGLEKG 190
Query: 203 VKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFS 262
N ++ L+DMY KCG +D DA+ VF
Sbjct: 191 ---NVVVGNCLIDMYGKCGFMD-------------------------------DAVLVFQ 216
Query: 263 RMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRA 322
ME + D++++ I+ +CS G + G F+ M N P Y ++D ++
Sbjct: 217 HMEEK----DTVSWNAIVASCSRNGKLELGLWFFHQMPN-----PDTVTYNELIDAFVKS 267
Query: 323 GNLEEACNMIKAMPVEPDVVIWRALLSA 350
G+ A ++ MP P+ W +L+
Sbjct: 268 GDFNNAFQVLSDMP-NPNSSSWNTILTG 294
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 111/255 (43%), Gaps = 30/255 (11%)
Query: 162 GMLSAEVE-------PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALV 214
G+L A VE PD ++ G + + +HG + + N LS +L+
Sbjct: 38 GVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLM 97
Query: 215 DMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSI 274
Y ++ + +VFD + V WN++++G G + I +F + +V P+
Sbjct: 98 RFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEF 157
Query: 275 TFVGILKACS-----------HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAG 323
+F L AC+ H LV G E N++ LI D+ G+ G
Sbjct: 158 SFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLI-----------DMYGKCG 206
Query: 324 NLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGDFVLLSNMYC 383
+++A + + M E D V W A++++C +GK EL + + ++ + L + +
Sbjct: 207 FMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFV 265
Query: 384 SLKNWHNAERVRNMM 398
+++NA +V + M
Sbjct: 266 KSGDFNNAFQVLSDM 280
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 167/312 (53%), Gaps = 8/312 (2%)
Query: 100 FSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRL 159
FS +D +N +I + + A VF ++ + TWN++I G+ N R + L
Sbjct: 352 FSHDIDNV-RNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFL 410
Query: 160 FRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKR-VKLNYILSAALVDMYA 218
+ ML + P+ T AS++ AR+G L + K H +L ++ K IL +LVDMYA
Sbjct: 411 LKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYA 470
Query: 219 KCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVG 278
K G I +K+VFD++ + + ++I+G G A+A F M+ + PD +T V
Sbjct: 471 KSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVA 530
Query: 279 ILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE 338
+L ACSH LV EG F M++ F I+ +LEHY MVDL RAG L++A ++ +P E
Sbjct: 531 VLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYE 590
Query: 339 PDVVIWRALLSACRIHGKKELAEFAIANISRLES-----GDFVLLSNMYCSLKNWHNAER 393
P + LL AC IHG + E+A A+ LE+ G ++LL++MY +W
Sbjct: 591 PSSAMCATLLKACLIHGNTNIGEWA-ADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVT 649
Query: 394 VRNMMKIGGVRK 405
V+ ++ GV+K
Sbjct: 650 VKTLLSDLGVQK 661
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
D A+ + + + + WN LIG Y++N RF + + +++ M+S + D FT+ SV+ C
Sbjct: 135 DEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKAC 194
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVW 241
A L + VHG + + N + AL+ MY + G++DV++++FD ++ RD VS W
Sbjct: 195 AALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVS-W 253
Query: 242 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 287
NA+IN +A + RM + V +T+ I C G
Sbjct: 254 NAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 168/392 (42%), Gaps = 42/392 (10%)
Query: 10 IKLQRLIHGAIKFGSLSESWSITQRSS--HSLTDHSVFHRVLQRSRASMDSTTAAKTHAK 67
+ + +L+ F L E+ +IT+ S H L + + ++ R + + +K
Sbjct: 119 VLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSK 178
Query: 68 LIVHGYATYPSLVAALIS--TYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIA 125
I TYPS++ A + +A H + V S + + N +I + G+ D+A
Sbjct: 179 GIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVA 238
Query: 126 RKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR- 184
R++FD+M RD V+WN +I Y + + +L M + VE T+ ++ GC
Sbjct: 239 RRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEA 298
Query: 185 ---LGAL--------CNA--------------------KW---VHGLMLEKRVKLNYI-- 208
+GAL CN KW H L++ + I
Sbjct: 299 GNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN 358
Query: 209 LSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVEN 268
+ +L+ MY++C + + VF V + +S WN++I+G A + + + + M +
Sbjct: 359 VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSG 418
Query: 269 VLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEA 328
P+ IT IL + G + G+E + R + L + ++VD+ ++G + A
Sbjct: 419 FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAA 478
Query: 329 CNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
+ +M + D V + +L+ GK E+A
Sbjct: 479 KRVFDSMR-KRDKVTYTSLIDGYGRLGKGEVA 509
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 167/312 (53%), Gaps = 8/312 (2%)
Query: 100 FSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRL 159
FS +D +N +I + + A VF ++ + TWN++I G+ N R + L
Sbjct: 352 FSHDIDNV-RNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFL 410
Query: 160 FRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKR-VKLNYILSAALVDMYA 218
+ ML + P+ T AS++ AR+G L + K H +L ++ K IL +LVDMYA
Sbjct: 411 LKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYA 470
Query: 219 KCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVG 278
K G I +K+VFD++ + + ++I+G G A+A F M+ + PD +T V
Sbjct: 471 KSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVA 530
Query: 279 ILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE 338
+L ACSH LV EG F M++ F I+ +LEHY MVDL RAG L++A ++ +P E
Sbjct: 531 VLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYE 590
Query: 339 PDVVIWRALLSACRIHGKKELAEFAIANISRLES-----GDFVLLSNMYCSLKNWHNAER 393
P + LL AC IHG + E+A A+ LE+ G ++LL++MY +W
Sbjct: 591 PSSAMCATLLKACLIHGNTNIGEWA-ADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVT 649
Query: 394 VRNMMKIGGVRK 405
V+ ++ GV+K
Sbjct: 650 VKTLLSDLGVQK 661
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
D A+ + + + + WN LIG Y++N RF + + +++ M+S + D FT+ SV+ C
Sbjct: 135 DEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKAC 194
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA-RDHVSVW 241
A L + VHG + + N + AL+ MY + G++DV++++FD ++ RD VS W
Sbjct: 195 AALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVS-W 253
Query: 242 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 287
NA+IN +A + RM + V +T+ I C G
Sbjct: 254 NAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 168/392 (42%), Gaps = 42/392 (10%)
Query: 10 IKLQRLIHGAIKFGSLSESWSITQRSS--HSLTDHSVFHRVLQRSRASMDSTTAAKTHAK 67
+ + +L+ F L E+ +IT+ S H L + + ++ R + + +K
Sbjct: 119 VLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSK 178
Query: 68 LIVHGYATYPSLVAALIS--TYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIA 125
I TYPS++ A + +A H + V S + + N +I + G+ D+A
Sbjct: 179 GIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVA 238
Query: 126 RKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR- 184
R++FD+M RD V+WN +I Y + + +L M + VE T+ ++ GC
Sbjct: 239 RRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEA 298
Query: 185 ---LGAL--------CNA--------------------KW---VHGLMLEKRVKLNYI-- 208
+GAL CN KW H L++ + I
Sbjct: 299 GNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN 358
Query: 209 LSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVEN 268
+ +L+ MY++C + + VF V + +S WN++I+G A + + + + M +
Sbjct: 359 VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSG 418
Query: 269 VLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEA 328
P+ IT IL + G + G+E + R + L + ++VD+ ++G + A
Sbjct: 419 FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAA 478
Query: 329 CNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
+ +M + D V + +L+ GK E+A
Sbjct: 479 KRVFDSMR-KRDKVTYTSLIDGYGRLGKGEVA 509
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 196/451 (43%), Gaps = 74/451 (16%)
Query: 9 LIKLQRLIHGAIKFGSLSESWSITQR---SSHSLTDHSV--FHRVLQRSRASMDSTTAAK 63
++ +I G ++ G + E+ S+ R + D ++ SR M A+
Sbjct: 293 VVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMK--IASS 350
Query: 64 THAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECD 123
H ++ GYATY + AL+ YA K G D
Sbjct: 351 AHCLIVKTGYATYKLVNNALVDMYA-----------------------------KRGIMD 381
Query: 124 IARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCA 183
A KVF+ M +DV++W L+ G N + + L+LF M + PD ASV++ A
Sbjct: 382 SALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASA 441
Query: 184 RLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNA 243
L L + VHG ++ + ++ +LV MY KCG ++ + +F+++ + W
Sbjct: 442 ELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTC 501
Query: 244 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 303
+I G A +GL DA + +F+ M+ +
Sbjct: 502 LIVGYAKNGLLEDA-----------------------------------QRYFDSMRTVY 526
Query: 304 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFA 363
I P EHY M+DL GR+G+ + ++ M VEPD +W+A+L+A R HG E E A
Sbjct: 527 GITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERA 586
Query: 364 IANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIHQ 420
+ LE + +V LSNMY + A VR +MK + K+ G SW+E +H
Sbjct: 587 AKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHS 646
Query: 421 FNAADQSHAEMKAIHRVLEGLIQRAKFDGCF 451
F + D+ H M I+ ++ ++ K G F
Sbjct: 647 FMSEDRRHPRMVEIYSKVDEMMLLIKEAGYF 677
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 144/309 (46%), Gaps = 38/309 (12%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNT--------------------------- 142
NL++ L K+G D AR++FDKMP RD TWNT
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTI 91
Query: 143 ----LIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLM 198
LI GY K+ ++ LF M S ++P+ +T SV+ C L L + +HG
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHT 151
Query: 199 LEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV-WNAMINGLAVHGLALDA 257
++ L+ + L+ MYA+C RI ++ +F+T+ + +V W +M+ G + +G A A
Sbjct: 152 IKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKA 211
Query: 258 IAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMV 316
I F + E + TF +L AC+ G + H I+++ F ++ ++
Sbjct: 212 IECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQ--SALI 269
Query: 317 DLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG--KKELAEFAIANISRLESGD 374
D+ + +E A +++ M V+ DVV W +++ C G + L+ F + ++ D
Sbjct: 270 DMYAKCREMESARALLEGMEVD-DVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDD 328
Query: 375 FVLLSNMYC 383
F + S + C
Sbjct: 329 FTIPSILNC 337
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 154/355 (43%), Gaps = 55/355 (15%)
Query: 10 IKLQRLIHGAIKFGSLSESWSI--TQRSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAK 67
I LI G K GS E++++ +S + VL+ + + + H
Sbjct: 91 ISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGH 150
Query: 68 LIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARK 127
I G+ ++V L++ YA+C + A ++F + GE
Sbjct: 151 TIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETM---------------EGE------ 189
Query: 128 VFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGA 187
++ VTW +++ GY +N + FR + + + +TF SV+T CA + A
Sbjct: 190 -------KNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSA 242
Query: 188 LCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMING 247
VH +++ K N + +AL+DMYAKC ++ ++ + + + D V WN+MI G
Sbjct: 243 CRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVG 302
Query: 248 LAVHGLALDAIAVFSRMEVENVLPDSITFVGILK------------ACSHCGLVNEGREH 295
GL +A+++F RM ++ D T IL + +HC +V G
Sbjct: 303 CVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYAT 362
Query: 296 FNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
+ ++ N +VD+ + G ++ A + + M +E DV+ W AL++
Sbjct: 363 YKLVNN------------ALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTG 404
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 180/344 (52%), Gaps = 11/344 (3%)
Query: 112 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 171
+I++ D A V D M +DVV+ +T+I G R + + +F M P+
Sbjct: 369 LIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PN 425
Query: 172 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYI-LSAALVDMYAKCGRIDVSKQVF 230
T S++ C+ L +KW HG+ + + + +N I + ++VD YAKCG I+++++ F
Sbjct: 426 AITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTF 485
Query: 231 DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVN 290
D + ++ W +I+ A++GL A+A+F M+ + P+++T++ L AC+H GLV
Sbjct: 486 DQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVK 545
Query: 291 EGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP--VEPDVVIWRALL 348
+G F M +P L+HY +VD+L RAG ++ A +IK +P V+ W A+L
Sbjct: 546 KGLMIFKSMVEEDH-KPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAIL 604
Query: 349 SACRIHGKKE-LAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVR 404
S CR KK + +A + LE S ++L S+ + + K+W + +R ++K VR
Sbjct: 605 SGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVR 664
Query: 405 KKRGKSWIELGDSIHQFNAADQSHAEMKAIHRVLEGLIQRAKFD 448
G S + G+ +F A D+ ++ V++ L + K D
Sbjct: 665 VVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSLHRCMKLD 708
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 130/260 (50%), Gaps = 6/260 (2%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D F N +I+ K + D A +VFD+ R++V+WN+++ G+V N R+ + L +F M+
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMV 320
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
VE D T S++ C K +HG+++ + + N + ++L+D Y C +D
Sbjct: 321 QEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVD 380
Query: 225 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
+ V D++ V + MI+GLA G + +AI++F M P++IT + +L ACS
Sbjct: 381 DAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACS 437
Query: 285 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 344
+ + I R L + ++VD + G +E A + E +++ W
Sbjct: 438 VSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQI-TEKNIISW 496
Query: 345 RALLSACRIHG--KKELAEF 362
++SA I+G K LA F
Sbjct: 497 TVIISAYAINGLPDKALALF 516
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 44/277 (15%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML-SAEVEPDGFTFASVVTGCA 183
ARK+FD+M RDV++W+ +I YV++ + GL+LF+ M+ A+ EPD T SV+ C
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
Query: 184 RLGALCNAKWVHGLMLEKRVKL-NYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 242
+ + + VHG + + L + + +L+DMY+K +D + +VFD ++ WN
Sbjct: 238 VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWN 297
Query: 243 AMINGLAVHGLALD-AIAVFSRMEVENVLPDSITFVGILKAC------------------ 283
+++ G VH D A+ +F M E V D +T V +L+ C
Sbjct: 298 SILAGF-VHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIR 356
Query: 284 -----------------SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLE 326
+ C LV++ + M + ++ TM+ L AG +
Sbjct: 357 RGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCS-----TMISGLAHAGRSD 411
Query: 327 EACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFA 363
EA ++ M P+ + +LL+AC + +++A
Sbjct: 412 EAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWA 448
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 104/245 (42%), Gaps = 5/245 (2%)
Query: 107 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 166
F N + + MK G+ + FD M RD V+WN ++ G + +GL F +
Sbjct: 62 FQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVW 121
Query: 167 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
EP+ T V+ C L + + +HG ++ + +++ MYA + +
Sbjct: 122 GFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-A 178
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKACSH 285
+++FD ++ V W+ +I + + +F M E PD +T +LKAC+
Sbjct: 179 RKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTV 238
Query: 286 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
++ GR R + +++D+ + +++ A + ++V W
Sbjct: 239 MEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCR-NIVSWN 297
Query: 346 ALLSA 350
++L+
Sbjct: 298 SILAG 302
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 207/452 (45%), Gaps = 60/452 (13%)
Query: 22 FGSLSESWSITQ--------RSSHSLTDHSVFHRVLQRSRASMD-STTAA---------- 62
F +++E +IT R+ H L +F +LQR D S T+A
Sbjct: 374 FANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEK 433
Query: 63 ----KTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMK 118
+ H I G A P + AL+ RC R+ D
Sbjct: 434 KVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCE----------RMAD------------- 470
Query: 119 AGECDIARKVFDKMP--VRDVVTWNTLIGGYVKNVRFLDGLRLF-RGMLSAEVEPDGFTF 175
A ++FD+ P + ++IGGY +N + LF R + ++ D +
Sbjct: 471 ------AEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSL 524
Query: 176 ASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR 235
++ C LG +H L+ + L +L+ MYAKC D + ++F+T+
Sbjct: 525 TLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMRE 584
Query: 236 DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA--CSHCGLVNEGR 293
V WN++I+ + +A+A++SRM + + PD IT ++ A + ++ R
Sbjct: 585 HDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCR 644
Query: 294 EHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRI 353
+ F M+ + I+P EHY V +LG G LEEA + I +MPV+P+V + RALL +CRI
Sbjct: 645 DLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRI 704
Query: 354 HGKKELAEFA---IANISRLESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKS 410
H +A+ I + +++L SN+Y + WH +E +R M+ G RK KS
Sbjct: 705 HSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKS 764
Query: 411 WIELGDSIHQFNAADQSHAEMKAIHRVLEGLI 442
WI + IH F+A D SH + K I+R LE LI
Sbjct: 765 WIIHENKIHSFHARDTSHPQEKDIYRGLEILI 796
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 139/305 (45%), Gaps = 13/305 (4%)
Query: 65 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGEC 122
H + I G S+ ALI Y++ ++ +M D + +I + M G
Sbjct: 308 HGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMV 367
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
D A ++F + ++ +T+N L+ G+ +N L L+LF ML VE F+ S V C
Sbjct: 368 DSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC 427
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR--DHVSV 240
+ ++ +HG ++ N + AL+DM +C R+ ++++FD D
Sbjct: 428 GLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKA 487
Query: 241 WNAMINGLAVHGLALDAIAVFSRMEVENVL-PDSITFVGILKACSHCGLVNEGRE-HFNI 298
++I G A +GL A+++F R E L D ++ IL C G G + H
Sbjct: 488 TTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYA 547
Query: 299 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRI---HG 355
++ + L + +++ + + + ++A + M E DV+ W +L+S C I +G
Sbjct: 548 LKAGYFSDISLGN--SLISMYAKCCDSDDAIKIFNTMR-EHDVISWNSLIS-CYILQRNG 603
Query: 356 KKELA 360
+ LA
Sbjct: 604 DEALA 608
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 4/189 (2%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-V 168
N +I + +K G A VF + VV++ LI G+ + ++ L++F M A V
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 169 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK--CGRIDVS 226
+P+ +TF +++T C R+ +HGL+++ + +S +L+ +Y K D
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRME-VENVLPDSITFVGILKACSH 285
++FD + + V+ WN +++ L G + A +F M VE DS T +L +C+
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 286 CGLVNEGRE 294
++ GRE
Sbjct: 298 SSVLLRGRE 306
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 35/204 (17%)
Query: 122 CDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE-VEPDGFTFASVVT 180
CD K+FD++P RDV +WNT++ VK + LF M E D FT +++++
Sbjct: 234 CDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLS 293
Query: 181 GCARLGALCNAKWVH------GLMLE-----------------KRVKLNYILSAA----- 212
C L + +H GLM E K+V+ Y + A
Sbjct: 294 SCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVT 353
Query: 213 ---LVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENV 269
++ Y G +D + ++F V + +NA++ G +G L A+ +F+ M V
Sbjct: 354 FTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGV 413
Query: 270 LPDSITFVGILKACSHCGLVNEGR 293
+T + A CGLV+E +
Sbjct: 414 ---ELTDFSLTSAVDACGLVSEKK 434
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 180/352 (51%), Gaps = 11/352 (3%)
Query: 107 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 166
F ++ K E + A+KVFD M RDVV W +I G+ + ++ F M
Sbjct: 438 FVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYRE 497
Query: 167 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
+ DGF+ +SV+ C+ + L + H L + + ALVDMY K G+ + +
Sbjct: 498 KNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA 557
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 286
+ +F + + WN+M+ + HG+ A++ F ++ +PD++T++ +L ACSH
Sbjct: 558 ETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHR 617
Query: 287 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMI-KAMPVEPDVVIWR 345
G +G+ +N M+ + I+ +HY MV+L+ +AG ++EA +I ++ P +WR
Sbjct: 618 GSTLQGKFLWNQMKEQG-IKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWR 676
Query: 346 ALLSACRIHGKKELAEFAIANISRLESGDF---VLLSNMYCSLKNWHNAERVRNMMKIGG 402
LLSAC ++ +A I +L+ D +LLSN+Y W + +R ++
Sbjct: 677 TLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLA 736
Query: 403 VRKKRGKSWIELGDSIHQ-FNAADQSHAEM-----KAIHRVLEGLIQRAKFD 448
K G SWIE+ ++ Q F++ DQS+ E+ ++R+ ++ ++ F+
Sbjct: 737 SSKDPGLSWIEVNNNNTQVFSSGDQSNPEVVSQAQDELNRLKRNMLCKSSFN 788
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 130/269 (48%), Gaps = 26/269 (9%)
Query: 107 FSKNLVIESLM-----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFR 161
+S N+V+++ + G+ + AR++FD + RD V WNT+I G +KN + DGL FR
Sbjct: 230 YSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFR 289
Query: 162 GMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCG 221
ML + V+P FT++ V+ GC++LG+ K +H ++ + L AL+DMY CG
Sbjct: 290 NMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCG 349
Query: 222 RIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSR-MEVENVLPDSITFVGIL 280
+ + VF + ++ WN++I+G + +G A+ ++ R + + PD TF +
Sbjct: 350 DMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAI 409
Query: 281 KACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG---------TMVDLLGRAGNLEEACNM 331
A + G+ L+ Q+ G T++ + + E A +
Sbjct: 410 SATAEPERFVHGK----------LLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKV 459
Query: 332 IKAMPVEPDVVIWRALLSACRIHGKKELA 360
M E DVV+W ++ G ELA
Sbjct: 460 FDVMK-ERDVVLWTEMIVGHSRLGNSELA 487
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 126/256 (49%), Gaps = 5/256 (1%)
Query: 107 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLD-GLRLFRGMLS 165
++ N +I ++ G + ARKVFDKMP R+VV++N L Y +N F L M
Sbjct: 133 YANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAF 192
Query: 166 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 225
V+P+ TF S+V CA L + ++ +++ N ++ +++ MY+ CG ++
Sbjct: 193 EYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLES 252
Query: 226 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 285
++++FD V WN MI G + D + F M + V P T+ +L CS
Sbjct: 253 ARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSK 312
Query: 286 CGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIW 344
G + G+ H I+ + L L++ ++D+ G++ EA + + P++V W
Sbjct: 313 LGSYSLGKLIHARIIVSDSLADLPLDN--ALLDMYCSCGDMREAFYVFGRIH-NPNLVSW 369
Query: 345 RALLSACRIHGKKELA 360
+++S C +G E A
Sbjct: 370 NSIISGCSENGFGEQA 385
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 32/297 (10%)
Query: 65 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDI 124
HA++IV L AL+ Y C A +VF R+ +
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNP------------------ 364
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS-AEVEPDGFTFASVVTGCA 183
++V+WN++I G +N + ++R +L + PD +TF++ ++ A
Sbjct: 365 -----------NLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATA 413
Query: 184 RLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNA 243
+ K +HG + + + + + L+ MY K + +++VFD + V +W
Sbjct: 414 EPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTE 473
Query: 244 MINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRF 303
MI G + G + A+ F M E D + ++ ACS ++ +G E F+ + R
Sbjct: 474 MIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG-EVFHCLAIRT 532
Query: 304 LIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
+ G +VD+ G+ G E A I ++ PD+ W ++L A HG E A
Sbjct: 533 GFDCVMSVCGALVDMYGKNGKYETA-ETIFSLASNPDLKCWNSMLGAYSQHGMVEKA 588
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 133/337 (39%), Gaps = 57/337 (16%)
Query: 107 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTL--IGGYVKNVRFLDG----LRLF 160
++ N +I ++ + ARKVFDKMP R++VT L + YV L L F
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEK---RVKLNYILSAALVDMY 217
+ + + + + C + L A+ +H L+L + + L+ MY
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 218 AKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVH-GLALDAIAVFSRMEVENVLPDSITF 276
+CG ++ +++VFD + +V +NA+ + + + A A + + M E V P+S TF
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 277 VGILKAC-----------------------------------SHCGLVNEGREHFNIMQN 301
+++ C S CG + R F+ + N
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262
Query: 302 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSACRIHGKKE 358
R + + TM+ + +E+ + M V+P + +L+ C G
Sbjct: 263 RDAVA-----WNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYS 317
Query: 359 LAEFAIANISRLES-GDFVL---LSNMYCSLKNWHNA 391
L + A I +S D L L +MYCS + A
Sbjct: 318 LGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREA 354
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 149/307 (48%), Gaps = 29/307 (9%)
Query: 57 DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESL 116
D + H + HGY T + AL+ Y +C A+ F ++ +
Sbjct: 410 DVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSE----------- 458
Query: 117 MKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 176
+RD V+WN L+ G + R L F GM E +P +T A
Sbjct: 459 -----------------LRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLA 500
Query: 177 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 236
+++ GCA + AL K +HG ++ K++ ++ A+VDMY+KC D + +VF A
Sbjct: 501 TLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATR 560
Query: 237 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 296
+ +WN++I G +G + + +F +E E V PD +TF+GIL+AC G V G ++F
Sbjct: 561 DLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYF 620
Query: 297 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
+ M ++ I PQ+EHY M++L + G L + + MP +P + + + AC+ +
Sbjct: 621 SSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRW 680
Query: 357 KELAEFA 363
+L +A
Sbjct: 681 SKLGAWA 687
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 153/307 (49%), Gaps = 19/307 (6%)
Query: 69 IVHGYATYPSLVA-ALIST-----YARCHQPHIAHHVF--SRVMDTFSKNLVIESLMKAG 120
++H A S+VA ++ST Y +C + A VF +R D S + +G
Sbjct: 284 VIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSG 343
Query: 121 ECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEP-DGFTFASVV 179
AR++FD MP R++V+WN ++GGYV + + L F ++ E+E D T ++
Sbjct: 344 LTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALD-FLTLMRQEIENIDNVTLVWIL 402
Query: 180 TGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA--RDH 237
C+ + + K HG + N I++ AL+DMY KCG + + F ++ RD
Sbjct: 403 NVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDE 462
Query: 238 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HF 296
VS WNA++ G+A G + A++ F M+VE P T +L C++ +N G+ H
Sbjct: 463 VS-WNALLTGVARVGRSEQALSFFEGMQVE-AKPSKYTLATLLAGCANIPALNLGKAIHG 520
Query: 297 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGK 356
++++ + I + G MVD+ + + A + K D+++W +++ C +G+
Sbjct: 521 FLIRDGYKIDVVIR--GAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRGCCRNGR 577
Query: 357 -KELAEF 362
KE+ E
Sbjct: 578 SKEVFEL 584
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 145/349 (41%), Gaps = 65/349 (18%)
Query: 45 FHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM 104
F VL+ +D + H ++ +GY+ L +++ Y +C RVM
Sbjct: 165 FAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKC-----------RVM 213
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
AR+VFD++ V+WN ++ Y++ + + +F ML
Sbjct: 214 SD------------------ARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKML 255
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
V P T +SV+ C+R AL K +H + ++ V + ++S ++ DMY KC R++
Sbjct: 256 ELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLE 315
Query: 225 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFS---------------------- 262
+++VFD + W + ++G A+ GL +A +F
Sbjct: 316 SARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHE 375
Query: 263 -----------RMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEH 311
R E+EN+ D++T V IL CS V G++ + R +
Sbjct: 376 WDEALDFLTLMRQEIENI--DNVTLVWILNVCSGISDVQMGKQAHGFIY-RHGYDTNVIV 432
Query: 312 YGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
++D+ G+ G L+ A + M D V W ALL+ G+ E A
Sbjct: 433 ANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQA 481
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 2/197 (1%)
Query: 88 ARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGY 147
AR Q H+ FS + F N IE+ K G D AR++F++MP RD +WN +I
Sbjct: 80 ARKVQSHLV--TFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITAC 137
Query: 148 VKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNY 207
+N + R+FR M V +FA V+ C + L + +H +++ N
Sbjct: 138 AQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNV 197
Query: 208 ILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE 267
L ++VD+Y KC + +++VFD + WN ++ G +A+ +F +M
Sbjct: 198 DLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLEL 257
Query: 268 NVLPDSITFVGILKACS 284
NV P + T ++ ACS
Sbjct: 258 NVRPLNHTVSSVMLACS 274
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 166/318 (52%), Gaps = 6/318 (1%)
Query: 113 IESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDG 172
I+ K D + K+F ++ D V N++IG Y + D LRLF ++ V PD
Sbjct: 277 IDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDK 336
Query: 173 FTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDT 232
FTF+SV++ + L + VH L+++ L+ ++ +L++MY K G +D++ VF
Sbjct: 337 FTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAK 395
Query: 233 VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL-PDSITFVGILKACSHCGLVNE 291
+ WN +I GLA + A++++A+F+++ + L PD +T +GIL AC + G VNE
Sbjct: 396 TDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNE 455
Query: 292 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 351
G + F+ M+ + P EHY +++LL R G + EA ++ +P EP IW +L A
Sbjct: 456 GIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCAS 515
Query: 352 RIHGKKELAEFAIANISRLE---SGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRG 408
G LAE + E S +++L +Y W N+ ++R M ++ +G
Sbjct: 516 LDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQG 575
Query: 409 KSWIELGDSIHQFNAADQ 426
S I + S+ F ADQ
Sbjct: 576 SSKISIESSVFSFE-ADQ 592
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 162/347 (46%), Gaps = 24/347 (6%)
Query: 45 FHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM 104
F R++ RS S T A HA+L+ G+ + Y + A +F +
Sbjct: 7 FSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIP 66
Query: 105 D--TFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
D T + N+ ++ L K G + A +FD+MP RDVV+WNT+I G V G+R+F
Sbjct: 67 DKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFD 126
Query: 163 MLSAEVEPDGFTF---ASVVTGCARLGALCNAKWVHGLMLEKRV-KLNYILSAALVDMYA 218
M E+ P FTF AS+VT C R G + +HG + V + N ++ +++DMY
Sbjct: 127 MQRWEIRPTEFTFSILASLVT-CVRHG-----EQIHGNAICSGVSRYNLVVWNSVMDMYR 180
Query: 219 KCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHG---LALDAIAVFSRMEVENVLPDSIT 275
+ G D + VF T+ V WN +I + G +ALD + ME++ PD T
Sbjct: 181 RLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQ---PDEYT 237
Query: 276 FVGILKACSHCGLVNEGREHFNI-MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKA 334
++ CS +++G++ + ++ FL + G +D+ + L+++ + +
Sbjct: 238 VSMVVSICSDLRELSKGKQALALCIKMGFLSNSIV--LGAGIDMFSKCNRLDDSVKLFRE 295
Query: 335 MPVEPDVVIWRALLSACRIH--GKKELAEFAIANISRLESGDFVLLS 379
+ + D V+ +++ + H G+ L F +A + F S
Sbjct: 296 LE-KWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSS 341
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 85/173 (49%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N V++ + G D A VF M RDVV+WN LI + L F M E++
Sbjct: 173 NSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQ 232
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
PD +T + VV+ C+ L L K L ++ N I+ A +DM++KC R+D S ++
Sbjct: 233 PDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKL 292
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
F + + + N+MI + H DA+ +F ++V PD TF +L +
Sbjct: 293 FRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS 345
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
+DT ++E K G D+A VF K +D++ WNT+I G +N R ++ L +F +
Sbjct: 368 LDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQL 427
Query: 164 L-SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLN-----YILSAALVDMY 217
L + ++PD T ++ C G + + M EK +N Y A ++++
Sbjct: 428 LMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSM-EKAHGVNPGNEHY---ACIIELL 483
Query: 218 AKCGRIDVSKQVFDTVARDHVS-VWNAMI 245
+ G I+ +K + D + + S +W ++
Sbjct: 484 CRVGMINEAKDIADKIPFEPSSHIWEPIL 512
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 150/297 (50%), Gaps = 5/297 (1%)
Query: 59 TTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVF---SRVMDTFSKNLVIES 115
T + H+ ++ GY ++++L+ +YA+ + A + S N+V
Sbjct: 429 TELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGI 488
Query: 116 LMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTF 175
+ G+ + K+ + D V+WN I ++ + + LF+ ML + + PD +TF
Sbjct: 489 YSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTF 548
Query: 176 ASVVTGCARLGALCNAKWVHGLMLEKRVKL-NYILSAALVDMYAKCGRIDVSKQVFDTVA 234
S+++ C++L L +HGL+ + + + L+DMY KCG I +VF+
Sbjct: 549 VSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETR 608
Query: 235 RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE 294
++ W A+I+ L +HG +A+ F PD ++F+ IL AC H G+V EG
Sbjct: 609 EKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMG 668
Query: 295 HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 351
F M++ + ++P+++HY VDLL R G L+EA ++I+ MP D +WR L C
Sbjct: 669 LFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 140/345 (40%), Gaps = 59/345 (17%)
Query: 34 RSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQP 93
R SLT+ S F VL+ D + + H G S+V +LIS Y +C
Sbjct: 208 RMGASLTESS-FLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNT 266
Query: 94 HIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRF 153
H+A +F AG DI V+WN +I K+
Sbjct: 267 HMAERMFQ----------------DAGSWDI-------------VSWNAIICATAKSENP 297
Query: 154 LDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAAL 213
L L+LF M P+ T+ SV+ + + L + +HG++++ + +L AL
Sbjct: 298 LKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNAL 357
Query: 214 VDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDS 273
+D YAKCG ++ S+ FD + ++ WNA+++G A + +++F +M P
Sbjct: 358 IDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI-CLSLFLQMLQMGFRPTE 416
Query: 274 ITFVGILKACS-------HCGLVNEGREHFN--------------IMQNRFLIQPQLEHY 312
TF LK+C H +V G E + +M + L+
Sbjct: 417 YTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGP 476
Query: 313 GTMVDL------LGRAGNLEEACNMIKAMPVEPDVVIWRALLSAC 351
++V L R G E+ +I + +PD V W ++AC
Sbjct: 477 TSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAAC 520
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 146/350 (41%), Gaps = 48/350 (13%)
Query: 10 IKLQRLIHGAIKFGSLSESWSI--TQRSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAK 67
+ +I G K+G + ++W + R L + S +L S AS+D + H
Sbjct: 81 VSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL--SCASLDVRAGTQLHGL 138
Query: 68 LIVHGYATYPSLVAA-LISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIAR 126
+ +G + V L+ Y R +D ++A
Sbjct: 139 SLKYGLFMADAFVGTCLLCLYGR--------------LDLL---------------EMAE 169
Query: 127 KVFDKMPVRDVVTWN---TLIG--GYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTG 181
+VF+ MP + + TWN +L+G G++K F FR ++ +F V+ G
Sbjct: 170 QVFEDMPFKSLETWNHMMSLLGHRGFLKECMFF-----FRELVRMGASLTESSFLGVLKG 224
Query: 182 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 241
+ + L +K +H +K + + +L+ Y KCG +++++F + W
Sbjct: 225 VSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSW 284
Query: 242 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQ 300
NA+I A L A+ +F M P+ T+V +L S L++ GR+ H +++
Sbjct: 285 NAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIK 344
Query: 301 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
N + + ++D + GNLE++ + + ++V W ALLS
Sbjct: 345 NG--CETGIVLGNALIDFYAKCGNLEDS-RLCFDYIRDKNIVCWNALLSG 391
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 115/285 (40%), Gaps = 42/285 (14%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDG---LRLFRGMLSA 166
N +I+ K G + +R FD + +++V WN L+ GY DG L LF ML
Sbjct: 355 NALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK----DGPICLSLFLQMLQM 410
Query: 167 EVEPDGFTFASVVTGCA------------RLGALCNAKWVHGLMLEKRVKLNYILSAALV 214
P +TF++ + C R+G N + LM + N +++ AL+
Sbjct: 411 GFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLM--RSYAKNQLMNDALL 468
Query: 215 ------------------DMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALD 256
+Y++ G+ S ++ T+ + WN I + +
Sbjct: 469 LLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEE 528
Query: 257 AIAVFSRMEVENVLPDSITFVGILKACSH-CGLVNEGREHFNIMQNRFLIQPQLEHYGTM 315
I +F M N+ PD TFV IL CS C L H I + F +
Sbjct: 529 VIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFV-CNVL 587
Query: 316 VDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
+D+ G+ G++ + + E +++ W AL+S IHG + A
Sbjct: 588 IDMYGKCGSIRSVMKVFEETR-EKNLITWTALISCLGIHGYGQEA 631
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 111/253 (43%), Gaps = 27/253 (10%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N +I K GE +A KVFD+MP R+ V++NT+I GY K +F M
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKL-NYILSAALVDMYAKCGRIDVSKQ 228
P+ T + +++ CA L + +HGL L+ + + + + L+ +Y + +++++Q
Sbjct: 113 PNQSTVSGLLS-CASLDVRAGTQ-LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQ 170
Query: 229 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS---- 284
VF+ + + WN M++ L G + + F + +F+G+LK S
Sbjct: 171 VFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKD 230
Query: 285 -------HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV 337
HC +G + ++ +++ G+ GN A M +
Sbjct: 231 LDISKQLHCSATKKG------------LDCEISVVNSLISAYGKCGNTHMAERMFQDAG- 277
Query: 338 EPDVVIWRALLSA 350
D+V W A++ A
Sbjct: 278 SWDIVSWNAIICA 290
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 155/299 (51%), Gaps = 20/299 (6%)
Query: 125 ARKVFDKMPV-RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCA 183
A KV++ + V D V N+LI G ++N + + +L + P+ +S + GC+
Sbjct: 238 AMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLAGCS 292
Query: 184 RLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNA 243
L K +H + L + L L+DMY KCG+I ++ +F + V W +
Sbjct: 293 DNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTS 352
Query: 244 MINGLAVHGLALDAIAVFSRM--EVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 301
MI+ AV+G + A+ +F M E VLP+S+TF+ ++ AC+H GLV EG+E F +M+
Sbjct: 353 MIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKE 412
Query: 302 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPD-----VVIWRALLSACRIHGK 356
++ + P EHY +D+L +AG EE +++ M +E D IW A+LSAC ++
Sbjct: 413 KYRLVPGTEHYVCFIDILSKAGETEEIWRLVERM-MENDNQSIPCAIWVAVLSACSLNMD 471
Query: 357 KELAEFAIANISRLESGD-----FVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKS 410
E+ + E+G +VL+SN Y ++ W E +R +K G+ K G S
Sbjct: 472 LTRGEYVARRLME-ETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 121/247 (48%), Gaps = 8/247 (3%)
Query: 108 SKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 167
S NLV+ + A +FD++P RD+ + N+ + ++++ D L LF + A
Sbjct: 20 STNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRAS 79
Query: 168 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 227
+ TF V+ C+ L + VH LM+++ + I AL+DMY+K G + S
Sbjct: 80 PDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSV 139
Query: 228 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 287
+VF++V + WNA+++G +G +A+ VF+ M E V T ++K C+
Sbjct: 140 RVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLK 199
Query: 288 LVNEGRE--HFNIMQNRFLIQPQLEHYGT-MVDLLGRAGNLEEACNMIKAMPVEPDVVIW 344
++ +G++ ++ R L+ GT M+ G + EA + ++ V D V+
Sbjct: 200 ILQQGKQVHAMVVVTGRDLVV-----LGTAMISFYSSVGLINEAMKVYNSLNVHTDEVML 254
Query: 345 RALLSAC 351
+L+S C
Sbjct: 255 NSLISGC 261
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 128/253 (50%), Gaps = 13/253 (5%)
Query: 106 TFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 165
T SK +I+ K G + +VF+ + +D+V+WN L+ G+++N + + L +F M
Sbjct: 119 TISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYR 178
Query: 166 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 225
VE FT +SVV CA L L K VH +++ L +L A++ Y+ G I+
Sbjct: 179 ERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINE 237
Query: 226 SKQVFDT--VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
+ +V+++ V D V + N++I+G + +A + SR P+ L C
Sbjct: 238 AMKVYNSLNVHTDEV-MLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGC 291
Query: 284 SHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVV 342
S + G++ H ++N F+ +L + ++D+ G+ G + +A + +A+P VV
Sbjct: 292 SDNSDLWIGKQIHCVALRNGFVSDSKLCN--GLMDMYGKCGQIVQARTIFRAIP-SKSVV 348
Query: 343 IWRALLSACRIHG 355
W +++ A ++G
Sbjct: 349 SWTSMIDAYAVNG 361
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 88/222 (39%), Gaps = 43/222 (19%)
Query: 10 IKLQRLIHGAIKFGSLSESWSITQRSSHSLTDHSVFHRVLQRSRASMDSTT----AAKTH 65
+ L LI G I+ + E++ + R ++ RVL S A + + H
Sbjct: 252 VMLNSLISGCIRNRNYKEAFLLMSRQRPNV-------RVLSSSLAGCSDNSDLWIGKQIH 304
Query: 66 AKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIA 125
+ +G+ + L L+ Y +C Q +++ A
Sbjct: 305 CVALRNGFVSDSKLCNGLMDMYGKCGQ-------------------IVQ----------A 335
Query: 126 RKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS--AEVEPDGFTFASVVTGCA 183
R +F +P + VV+W ++I Y N + L +FR M + V P+ TF V++ CA
Sbjct: 336 RTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACA 395
Query: 184 RLGALCNAKWVHGLMLEK-RVKLNYILSAALVDMYAKCGRID 224
G + K G+M EK R+ +D+ +K G +
Sbjct: 396 HAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETE 437
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 157/298 (52%), Gaps = 7/298 (2%)
Query: 112 VIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVK-NVRFLDGLRLFRGMLSAEVEP 170
++ + +K G A K+ + RD+++ LI G+ + N D +F+ M+ + +
Sbjct: 255 LVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKM 314
Query: 171 DGFTFASVVTGCARLGALCNAKWVHGLMLEK-RVKLNYILSAALVDMYAKCGRIDVSKQV 229
D +S++ C + ++ + +HG L+ +++ + L +L+DMYAK G I+ +
Sbjct: 315 DEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLA 374
Query: 230 FDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 289
F+ + V W ++I G HG AI +++RME E + P+ +TF+ +L ACSH G
Sbjct: 375 FEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQT 434
Query: 290 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP--VEPDVVIWRAL 347
G + ++ M N+ I+ + EH ++D+L R+G LEEA +I++ V W A
Sbjct: 435 ELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAF 494
Query: 348 LSACRIHGKKELAEFAIANISRLESG---DFVLLSNMYCSLKNWHNAERVRNMMKIGG 402
L ACR HG +L++ A + +E +++ L+++Y + W NA R +MK G
Sbjct: 495 LDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESG 552
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 99/174 (56%)
Query: 109 KNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEV 168
K+++I+ +K G+ ARK+FD++ RDVV+W +I + + D L LF+ M +V
Sbjct: 50 KDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDV 109
Query: 169 EPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQ 228
+ + FT+ SV+ C LG L +HG + + N I+ +AL+ +YA+CG+++ ++
Sbjct: 110 KANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARL 169
Query: 229 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
FD++ + WNAMI+G + A + ++F M E PD TF +L+A
Sbjct: 170 QFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 118/257 (45%), Gaps = 7/257 (2%)
Query: 110 NLVIESLM-----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
NL++ S + + G+ + AR FD M RD+V+WN +I GY N LF+ ML
Sbjct: 147 NLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLML 206
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
+ +PD FTF S++ + L +HGL ++ + L +LV+ Y KCG +
Sbjct: 207 TEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLA 266
Query: 225 VSKQVFDTVARDHVSVWNAMINGLA-VHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
+ ++ + + + A+I G + + DA +F M D + +LK C
Sbjct: 267 NAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKIC 326
Query: 284 SHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVI 343
+ V GR+ I+ + +++D+ ++G +E+A + M E DV
Sbjct: 327 TTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK-EKDVRS 385
Query: 344 WRALLSACRIHGKKELA 360
W +L++ HG E A
Sbjct: 386 WTSLIAGYGRHGNFEKA 402
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Query: 194 VHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGL 253
+HG + N L L+D+Y K G + ++++FD +++ V W AMI+ + G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 254 ALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQLEHY 312
DA+ +F M E+V + T+ +LK+C G + EG + H ++ + L
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGN--CAGNLIVR 151
Query: 313 GTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALL 348
++ L R G +EEA +M E D+V W A++
Sbjct: 152 SALLSLYARCGKMEEARLQFDSMK-ERDLVSWNAMI 186
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N +I+ K+GE + A F++M +DV +W +LI GY ++ F + L+ M ++
Sbjct: 356 NSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIK 415
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKR-VKLNYILSAALVDMYAKCGRIDVSKQ 228
P+ TF S+++ C+ G ++ M+ K ++ + ++DM A+ G ++ +
Sbjct: 416 PNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYA 475
Query: 229 VF---DTVARDHVSVWNAMINGLAVHG-LALDAIAVFSRMEVENVLP 271
+ + + S W A ++ HG + L +A + +E P
Sbjct: 476 LIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKP 522
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 116/221 (52%), Gaps = 4/221 (1%)
Query: 112 VIESLM----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 167
++ SLM K G + ++FD++ R+V W +I YV+N G+ +FR ML ++
Sbjct: 455 LVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSK 514
Query: 168 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 227
PD T V+T C+ L AL K +HG +L+K + +SA ++ MY KCG + +
Sbjct: 515 HRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSAN 574
Query: 228 QVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCG 287
FD VA W A+I + L DAI F +M P++ TF +L CS G
Sbjct: 575 FSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAG 634
Query: 288 LVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEA 328
V+E FN+M + +QP EHY +++LL R G +EEA
Sbjct: 635 FVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 126/275 (45%), Gaps = 7/275 (2%)
Query: 103 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
V F + +I+ K G+ R+VF R+ ++W L+ GY N RF LR
Sbjct: 349 VEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVW 408
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
M PD T A+V+ CA L A+ K +H L+ N L +L+ MY+KCG
Sbjct: 409 MQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGV 468
Query: 223 IDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
+ ++FD + + +V W AMI+ + I VF M + PDS+T +L
Sbjct: 469 PEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTV 528
Query: 283 CSHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDV 341
CS + G+E H +I++ F P + ++ + G+ G+L A A+ V+ +
Sbjct: 529 CSDLKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDLRSANFSFDAVAVKGSL 586
Query: 342 VIWRALLSACRIHGKKELAEFAIANISRLESGDFV 376
W A++ A +G EL AI ++ S F
Sbjct: 587 T-WTAIIEA---YGCNELFRDAINCFEQMVSRGFT 617
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 140/293 (47%), Gaps = 8/293 (2%)
Query: 74 ATYPSLVAALISTYARCHQPHIAHHVFSRVMDT--FSKNLVIESLMKAGECDIARKVFDK 131
T+ +L+ A + + H + H+ +++ F + ++ G A+KVFD+
Sbjct: 112 TTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDE 171
Query: 132 MPVRDVVTWNTLIGGYV--KNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 189
+V +WN L+ G V R+ D L F M V+ + ++ ++V A AL
Sbjct: 172 STSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALR 231
Query: 190 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLA 249
H L ++ + + L +LVDMY KCG++ ++++VFD + + VW AMI GLA
Sbjct: 232 QGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLA 291
Query: 250 VHGLALDAIAVFSRM-EVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQP 307
+ +A+ +F M E + P+S+ IL + G+E H ++++++ ++
Sbjct: 292 HNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQ 351
Query: 308 QLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
H G ++DL + G++ + + + + W AL+S +G+ + A
Sbjct: 352 PFVHSG-LIDLYCKCGDMASGRRVFYGSK-QRNAISWTALMSGYAANGRFDQA 402
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 152/292 (52%), Gaps = 9/292 (3%)
Query: 75 TYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLM-----KAGECDIARKVF 129
T + L++ +R + + V ++ NL++ES + + GE A + F
Sbjct: 182 TNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAF 241
Query: 130 DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALC 189
D M +DV++W +I + + + +F GML+ P+ FT S++ C+ AL
Sbjct: 242 DMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALR 301
Query: 190 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLA 249
+ VH L++++ +K + + +L+DMYAKCG I ++VFD ++ + W ++I A
Sbjct: 302 FGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHA 361
Query: 250 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE-HFNIMQNRFLIQPQ 308
G +AI++F M+ +++ +++T V IL+AC G + G+E H I++N I+
Sbjct: 362 REGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNS--IEKN 419
Query: 309 LEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
+ T+V L + G +A N+++ +P DVV W A++S C G + A
Sbjct: 420 VYIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVVSWTAMISGCSSLGHESEA 470
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 5/186 (2%)
Query: 103 VMDTFSKNLVIESLM-----KAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGL 157
+ ++ KN+ I S + K GE A V ++P RDVV+W +I G + L
Sbjct: 412 IKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEAL 471
Query: 158 RLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMY 217
+ M+ VEP+ FT++S + CA +L + +H + + N + +AL+ MY
Sbjct: 472 DFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMY 531
Query: 218 AKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFV 277
AKCG + + +VFD++ ++ W AMI G A +G +A+ + RME E D F
Sbjct: 532 AKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFA 591
Query: 278 GILKAC 283
IL C
Sbjct: 592 TILSTC 597
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 128/260 (49%), Gaps = 8/260 (3%)
Query: 107 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 166
F NL I S ++ G+ ARKVFD MP ++ VTW +I GY+K + LF +
Sbjct: 119 FGNNL-ISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKH 177
Query: 167 EVE-PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 225
+ + F ++ C+R + VHG M++ V N I+ ++LV YA+CG +
Sbjct: 178 GIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTS 236
Query: 226 SKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 285
+ + FD + V W A+I+ + G + AI +F M LP+ T ILKACS
Sbjct: 237 ALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSE 296
Query: 286 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWR 345
+ GR+ +++ R +I+ + +++D+ + G + + + M + V W
Sbjct: 297 EKALRFGRQVHSLVVKR-MIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS-NRNTVTWT 354
Query: 346 ALLSACRIHGKKELAEFAIA 365
++++A H ++ E AI+
Sbjct: 355 SIIAA---HAREGFGEEAIS 371
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 155/305 (50%), Gaps = 14/305 (4%)
Query: 98 HVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGL 157
HV S ++D + K IE+ + ++ +P ++ N+L+ + D +
Sbjct: 352 HVQSALIDMYGKCNGIEN---------SALLYQSLPCLNLECCNSLMTSLMHCGITKDII 402
Query: 158 RLFRGMLSAEVEPDGFTFASVVTGCAR--LGALCNAKWVHGLMLEKRVKLNYILSAALVD 215
+F M+ D T ++V+ + +L + VH ++ + +S +L+D
Sbjct: 403 EMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLID 462
Query: 216 MYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSIT 275
Y K G+ +VS++VFD + ++ ++ING A +G+ D + + M+ N++PD +T
Sbjct: 463 AYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVT 522
Query: 276 FVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 335
+ +L CSH GLV EG F+ +++++ I P + Y MVDLLGRAG +E+A ++
Sbjct: 523 ILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQA 582
Query: 336 PVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGDF---VLLSNMYCSLKNWHNAE 392
+ D V W +LL +CRIH + + A + LE +F + +S Y + ++ +
Sbjct: 583 RGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISR 642
Query: 393 RVRNM 397
++R +
Sbjct: 643 QIREI 647
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 125/250 (50%), Gaps = 1/250 (0%)
Query: 107 FSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 166
++ N I+ L+K+G A + FD+M VRDVVT+N LI G + L + L+ M+S
Sbjct: 47 YTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSC 106
Query: 167 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
+ TF SV++ C+ VH ++ N + +ALV +YA +DV+
Sbjct: 107 GLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVA 166
Query: 227 KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHC 286
++FD + +++V N ++ G + V+ RME+E V + +T+ +++ CSH
Sbjct: 167 LKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHD 226
Query: 287 GLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 346
LV EG++ +++ + +VD G+L + A+P E DV+ W +
Sbjct: 227 RLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVISWNS 285
Query: 347 LLSACRIHGK 356
++S C +G
Sbjct: 286 IVSVCADYGS 295
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 142/294 (48%), Gaps = 23/294 (7%)
Query: 58 STTAAKTHAKLIVHGY----ATYPSLVAALISTYARCHQPHIAHHVFSRVMDT-FSKNLV 112
S A + +A+++ G +T+PS V ++ S C + V RV+ F N+
Sbjct: 93 SLRAIELYAEMVSCGLRESASTFPS-VLSVCSDELFCRE---GIQVHCRVISLGFGCNMF 148
Query: 113 IES-LMKAGEC----DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 167
+ S L+ C D+A K+FD+M R++ N L+ + + + RLF L E
Sbjct: 149 VRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTG---ESKRLFEVYLRME 205
Query: 168 VE---PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSA-ALVDMYAKCGRI 223
+E +G T+ ++ GC+ + K +H L+++ ++ I A LVD Y+ CG +
Sbjct: 206 LEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDL 265
Query: 224 DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKAC 283
S + F+ V V WN++++ A +G LD++ +FS+M+ P F+ L C
Sbjct: 266 SGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFC 325
Query: 284 SHCGLVNEGRE-HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP 336
S + G++ H +++ F + L ++D+ G+ +E + + +++P
Sbjct: 326 SRNSDIQSGKQIHCYVLKMGFDVS-SLHVQSALIDMYGKCNGIENSALLYQSLP 378
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 127/243 (52%), Gaps = 10/243 (4%)
Query: 81 AALISTYARCHQPHIAHHVFSRV---MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDV 137
AL+ +A+C A +F+ + + + N +I + G+ AR++FD MP R+V
Sbjct: 303 TALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNV 362
Query: 138 VTWNTLIGGYVKNVRFLDGLRLFRGMLS-AEVEPDGFTFASVVTGCARLGALCNAKWVHG 196
V+WN+LI GY N + + F M+ + +PD T SV++ C + L +
Sbjct: 363 VSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVD 422
Query: 197 LMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALD 256
+ + ++KLN +L+ MYA+ G + +K+VFD + V +N + A +G ++
Sbjct: 423 YIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVE 482
Query: 257 AIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMV 316
+ + S+M+ E + PD +T+ +L AC+ GL+ EG+ F ++N P +HY M
Sbjct: 483 TLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM- 536
Query: 317 DLL 319
DLL
Sbjct: 537 DLL 539
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 146/309 (47%), Gaps = 39/309 (12%)
Query: 83 LISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTW 140
+IS Y + A +F + D S ++I K + + ARK FD+MP + VV+W
Sbjct: 173 MISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSW 232
Query: 141 NTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLE 200
N ++ GY +N D LRLF ML V P+ T+ V++ C+ + + L+ E
Sbjct: 233 NAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDE 292
Query: 201 KRVKLNYILSAALVDMYAKC--------------------------------GRIDVSKQ 228
KRV+LN + AL+DM+AKC G + ++Q
Sbjct: 293 KRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQ 352
Query: 229 VFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM-EVENVLPDSITFVGILKACSHCG 287
+FDT+ + +V WN++I G A +G A AI F M + + PD +T + +L AC H
Sbjct: 353 LFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMA 412
Query: 288 LVNEGREHFN-IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRA 346
+ G + I +N+ I+ Y +++ + R GNL EA + M E DVV +
Sbjct: 413 DLELGDCIVDYIRKNQ--IKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK-ERDVVSYNT 469
Query: 347 LLSACRIHG 355
L +A +G
Sbjct: 470 LFTAFAANG 478
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 115/287 (40%), Gaps = 71/287 (24%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
D + +N++++ +K + ARKVFD++ R WN +I GY K + +LF M
Sbjct: 135 DPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMM- 193
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
E D ++ ++TG A++ L NA
Sbjct: 194 ---PENDVVSWTVMITGFAKVKDLENA--------------------------------- 217
Query: 225 VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
++ FD + V WNAM++G A +G DA+ +F+ M V P+ T+V ++ ACS
Sbjct: 218 --RKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACS 275
Query: 285 H----------CGLVNEGREHFNI---------------------MQNRFLIQPQLEHYG 313
L++E R N + N Q L +
Sbjct: 276 FRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWN 335
Query: 314 TMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELA 360
M+ R G++ A + MP + +VV W +L++ +G+ LA
Sbjct: 336 AMISGYTRIGDMSSARQLFDTMP-KRNVVSWNSLIAGYAHNGQAALA 381
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 121/281 (43%), Gaps = 25/281 (8%)
Query: 125 ARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
R +FD + +V N++ + K D LRL+ + PD F+F V+ R
Sbjct: 59 TRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGR 118
Query: 185 LGALCNAKWVHGLMLEKR--VKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 242
G L A ++EK K Y+ + ++DMY K ++ +++VFD +++ S WN
Sbjct: 119 FGILFQA------LVEKLGFFKDPYVRNV-IMDMYVKHESVESARKVFDQISQRKGSDWN 171
Query: 243 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 302
MI+G G +A +F M +V+ ++ G K + R++F+ M +
Sbjct: 172 VMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKD----LENARKYFDRMPEK 227
Query: 303 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSACRIHGKKEL 359
++ + M+ + G E+A + M V P+ W ++SAC L
Sbjct: 228 SVVS-----WNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSL 282
Query: 360 AEFAIANIS--RLESGDFV--LLSNMYCSLKNWHNAERVRN 396
+ I R+ FV L +M+ ++ +A R+ N
Sbjct: 283 TRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN 323
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 97/181 (53%)
Query: 182 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 241
C L AK VHG + L+ + L++MY+ CG + + VF+ ++ ++ W
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 242 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 301
+I A +G DAI +FSR + E +PD F GI AC G V+EG HF M
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSR 383
Query: 302 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAE 361
+ I P +E Y ++V++ G L+EA ++ MP+EP+V +W L++ R+HG EL +
Sbjct: 384 DYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGD 443
Query: 362 F 362
+
Sbjct: 444 Y 444
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 104 MDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGM 163
+D S ++++E G + A VF+KM +++ TW +I + KN D + +F
Sbjct: 287 LDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRF 346
Query: 164 LSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSA------ALVDMY 217
PDG F + C LG + GL+ + + +Y ++ +LV+MY
Sbjct: 347 KEEGNIPDGQLFRGIFYACGMLGDV-----DEGLLHFESMSRDYGIAPSIEDYVSLVEMY 401
Query: 218 AKCGRIDVSKQVFDTVARD-HVSVWNAMINGLAVHG 252
A G +D + + + + + +V VW ++N VHG
Sbjct: 402 ALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHG 437
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 114/218 (52%), Gaps = 3/218 (1%)
Query: 148 VKNVRFLDGLRLFRG---MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVK 204
V+ V L RL++ +L PD F + CA L +L ++K VH L+ + +
Sbjct: 209 VEEVMRLCQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFR 268
Query: 205 LNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRM 264
+ L+ ++ M+ +C I +K+VFD + + W+ M+ + +G+ DA+ +F M
Sbjct: 269 GDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEM 328
Query: 265 EVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGN 324
+ P+ TF+ + AC+ G + E HF+ M+N I P+ EHY ++ +LG+ G+
Sbjct: 329 TKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGH 388
Query: 325 LEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEF 362
L EA I+ +P EP W A+ + R+HG +L ++
Sbjct: 389 LVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDY 426
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 14/151 (9%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVE 169
N+VI + A++VFD M +D+ +W+ ++ Y N D L LF M ++
Sbjct: 275 NMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLK 334
Query: 170 PDGFTFASVVTGCARLGALCNA-------KWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
P+ TF +V CA +G + A K HG+ + L ++ + KCG
Sbjct: 335 PNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYL------GVLGVLGKCGH 388
Query: 223 -IDVSKQVFDTVARDHVSVWNAMINGLAVHG 252
++ + + D W AM N +HG
Sbjct: 389 LVEAEQYIRDLPFEPTADFWEAMRNYARLHG 419
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 193/427 (45%), Gaps = 43/427 (10%)
Query: 10 IKLQRLIHGAIKFGSLSESWSITQRS---SHSLTDHSVFHRVLQRSRASMDSTTAAKTHA 66
I LI+G G +SE+ + R H D + ++ S A
Sbjct: 159 ITFSTLINGLCLEGRVSEALELVDRMVEMGHK-PDLITINTLVNGLCLSGKEAEAMLLID 217
Query: 67 KLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV------MDTFSKNLVIESLMKAG 120
K++ +G +++ + Q +A + ++ +D +++I+ L K G
Sbjct: 218 KMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 277
Query: 121 ECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 176
D A +F++M ++ +++T+N LIGG+ R+ DG +L R M+ ++ P+ TF+
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 337
Query: 177 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 236
++ + G L A+ +H M+ + + + I +L+D + K +D + Q+ D +
Sbjct: 338 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
Query: 237 ----HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEG 292
++ +N +ING D + +F +M + V+ D++T+ +++ G +N
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 293 REHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM---IKAMPVEPDVVIWRALLS 349
+E F M +R + P + Y ++D L G E+A + I+ +E D+ I+ +
Sbjct: 458 KELFQEMVSR-KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII-- 514
Query: 350 ACRIHGKKELAEFAIANISRLESGDFVLLSNMYCS--LKNWHNAERVRNMMKIGGVRKKR 407
IHG + N S+++ +++CS LK + N+M IGG+ KK
Sbjct: 515 ---IHG--------MCNASKVDDA-----WDLFCSLPLKGVKPGVKTYNIM-IGGLCKKG 557
Query: 408 GKSWIEL 414
S EL
Sbjct: 558 PLSEAEL 564
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 8/204 (3%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLF 160
DT + +I+ K D A ++ D M + ++ T+N LI GY K R DGL LF
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
R M V D T+ +++ G LG L AK + M+ ++V N + L+D
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 221 GRIDVSKQVFDTVARDH----VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
G + + ++F+ + + + ++N +I+G+ DA +F + ++ V P T+
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546
Query: 277 VGILKACSHCGLVNEGREHFNIMQ 300
++ G ++E F M+
Sbjct: 547 NIMIGGLCKKGPLSEAELLFRKME 570
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 145/340 (42%), Gaps = 27/340 (7%)
Query: 31 ITQRSSHSLTDHS-VFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYAR 89
I R ++ D S +F + + + + + K I H T ++ +I+ + R
Sbjct: 80 IHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT----LSIMINCFCR 135
Query: 90 CHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKVFDKM------PVRDV 137
C + +A +++ +T + + +I L G A ++ D+M P D+
Sbjct: 136 CRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP--DL 193
Query: 138 VTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGL 197
+T NTL+ G + + + + L M+ +P+ T+ V+ + G A +
Sbjct: 194 ITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 198 MLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS----VWNAMINGLAVHGL 253
M E+ +KL+ + + ++D K G +D + +F+ + ++ +N +I G G
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 254 ALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG 313
D + M + P+ +TF ++ + G + E E M +R I P Y
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG-IAPDTITYT 372
Query: 314 TMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSA 350
+++D + +L++A M+ M +P++ + L++
Sbjct: 373 SLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 182 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 241
C AL AK VH + + ++++MY+ CG ++ + VF+++ ++ W
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 242 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 301
+I A +G DAI FSR + E PD F I AC G +NEG HF M
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYK 310
Query: 302 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
+ I P +EHY ++V +L G L+EA +++M EP+V +W L++ R+HG
Sbjct: 311 EYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHG 362
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 4/152 (2%)
Query: 103 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
+ D + N +IE G + A VF+ MP R++ TW +I + KN + D + F
Sbjct: 213 ISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSR 272
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILS--AALVDMYAKC 220
+PDG F + C LG + N +H + K + + +LV M A+
Sbjct: 273 FKQEGNKPDGEMFKEIFFACGVLGDM-NEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEP 331
Query: 221 GRIDVSKQVFDTVARDHVSVWNAMINGLAVHG 252
G +D + + +++ +V +W ++N VHG
Sbjct: 332 GYLDEALRFVESM-EPNVDLWETLMNLSRVHG 362
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 97/191 (50%)
Query: 182 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 241
C + AL A+ VH ++ + A+++MY+ C +D + +VF+ + +
Sbjct: 129 CGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTL 188
Query: 242 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 301
M+ +G +AI +F+R + E P+ F + C+ G V EG F M
Sbjct: 189 CVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYR 248
Query: 302 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAE 361
+ I P +EHY ++ +L +G+L+EA N ++ MP+EP V +W L++ R+HG EL +
Sbjct: 249 EYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGD 308
Query: 362 FAIANISRLES 372
+ +L++
Sbjct: 309 RCAELVEKLDA 319
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 133/267 (49%), Gaps = 12/267 (4%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLF 160
D + VI L K GE D+A + +KM DVV ++T+I K D L LF
Sbjct: 204 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLF 263
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
M + + PD FT++S+++ G +A + MLE+++ N + +L+D +AK
Sbjct: 264 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE 323
Query: 221 GRIDVSKQVFDTVAR----DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
G++ ++++FD + + ++ +N++ING +H +A +F+ M ++ LPD +T+
Sbjct: 324 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
Query: 277 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM- 335
++ V +G E F M R L+ + Y T++ +A + + A + K M
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT-YTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 336 --PVEPDVVIWRALLSACRIHGKKELA 360
V P+++ + LL +GK E A
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 185/412 (44%), Gaps = 67/412 (16%)
Query: 9 LIKLQRLIHGAIKFGSLSESWSITQR------SSHSLTDHSVFHRVLQRSRASMDSTTAA 62
++ L L++G +SE+ ++ + ++T ++ H + Q ++AS A
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS----EAV 190
Query: 63 KTHAKLIVHGYATYPSLV--AALISTYARCHQPHIAHHVFSRV------MDTFSKNLVIE 114
+++V G P LV A+I+ + +P +A ++ +++ D + VI+
Sbjct: 191 ALVERMVVKG--CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVID 248
Query: 115 SLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEP 170
SL K D A +F +M + DV T+++LI R+ D RL ML ++ P
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP 308
Query: 171 DGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF 230
+ TF S++ A+ G L A+ + M+++ + N + +L++ + R+D ++Q+F
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 231 D-TVARD---HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA---C 283
V++D V +N +ING +D + +F M ++ +++T+ ++
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Query: 284 SHCG--------LVNEGREHFNIMQNRFLI------------------------QPQLEH 311
S C +V++G H NIM L+ +P +
Sbjct: 429 SDCDNAQMVFKQMVSDGV-HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 312 YGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSACRIHGKKELA 360
Y M + + +AG +E+ ++ ++ V+PDV+ + ++S G KE A
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 125/275 (45%), Gaps = 17/275 (6%)
Query: 77 PSLVA--ALISTYARCHQPHIAHHVFSRVMD-TFSKNLVIESLMKAGEC-----DIARKV 128
P++V +LI +A+ + A +F ++ + N+V + + G C D A+++
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 129 FDKMPVRD----VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
F M +D VVT+NTLI G+ K + +DG+ LFR M + + T+ +++ G +
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH----VSV 240
NA+ V M+ V N + L+D K G+++ + VF+ + + +
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 241 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 300
+N M G+ G D +F + ++ V PD I + ++ GL E F M+
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK 547
Query: 301 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 335
+ P Y T++ R G+ + +IK M
Sbjct: 548 EDGPL-PDSGTYNTLIRAHLRDGDKAASAELIKEM 581
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 173/367 (47%), Gaps = 39/367 (10%)
Query: 67 KLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV------MDTFSKNLVIESLMKAG 120
+++ G+ ++ + Q +A + ++ +D +++I+ L K G
Sbjct: 202 RMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 121 ECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 176
D A +F++M ++ D++ + TLI G+ R+ DG +L R M+ ++ PD F+
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Query: 177 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 236
+++ + G L A+ +H M+++ + + + +L+D + K ++D + + D +
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 237 ----HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEG 292
++ +N +ING L D + +F +M + V+ D++T+ +++ G +
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 293 REHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM---IKAMPVEPDVVIWRALLS 349
+E F M +R ++P + Y ++D L G E+A + I+ +E D+ I+ +
Sbjct: 442 KELFQEMVSR-RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII-- 498
Query: 350 ACRIHGKKELAEFAIANISRLESGDFVLLSNMYCS--LKNWHNAERVRNMMKIGGVRKKR 407
IHG + N S+++ +++CS LK + N+M IGG+ KK
Sbjct: 499 ---IHG--------MCNASKVDDA-----WDLFCSLPLKGVKPDVKTYNIM-IGGLCKKG 541
Query: 408 GKSWIEL 414
S +L
Sbjct: 542 SLSEADL 548
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 16/240 (6%)
Query: 77 PSLVA--ALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKV 128
P +VA ALI + + + A + ++ DT + +I+ K + D A +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 129 FDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
D M + ++ T+N LI GY K DGL LFR M V D T+ +++ G
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH----VSV 240
LG L AK + M+ +RV+ + + L+D G + + ++F+ + + + +
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 241 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 300
+N +I+G+ DA +F + ++ V PD T+ ++ G ++E F M+
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 130/319 (40%), Gaps = 24/319 (7%)
Query: 34 RSSHSLTDHSVFHRVLQRSRA-SMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQ 92
R L D S V+ R++ + + K I H T ++ +I+ RC +
Sbjct: 67 RPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT----LSIMINCCCRCRK 122
Query: 93 PHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKVFDKM------PVRDVVTW 140
+A +++ DT + + +I L G A ++ D+M P ++T
Sbjct: 123 LSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT--LITL 180
Query: 141 NTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLE 200
N L+ G N + D + L M+ +P+ T+ V+ + G A + M E
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
Query: 201 KRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA----RDHVSVWNAMINGLAVHGLALD 256
+++KL+ + + ++D K G +D + +F+ + + + ++ +I G G D
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 257 AIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMV 316
+ M + PD + F ++ G + E E M R I P Y +++
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG-ISPDTVTYTSLI 359
Query: 317 DLLGRAGNLEEACNMIKAM 335
D + L++A +M+ M
Sbjct: 360 DGFCKENQLDKANHMLDLM 378
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 111 LVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 166
+V+ L K G+ D+A + +KM DVV +NT+I K D L LF+ M +
Sbjct: 230 VVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 289
Query: 167 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
+ P+ T++S+++ G +A + M+EK++ N + AL+D + K G+ +
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 227 KQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
++++D + + + +N+++NG +H A +F M ++ PD +T+ ++K
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 283 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEP 339
V +G E F M +R L+ + Y T++ L G+ + A + K M V P
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVT-YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468
Query: 340 DVVIWRALLSACRIHGKKELA 360
D++ + LL +GK E A
Sbjct: 469 DIMTYSILLDGLCNNGKLEKA 489
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 122/279 (43%), Gaps = 11/279 (3%)
Query: 67 KLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDT--FSKNLVIESLMKAGECDI 124
K I T+ +L+ A + + + R +D F+ N ++ D
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 125 ARKVFDKMPVRD----VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 180
A+++F+ M +D VVT+NTLI G+ K+ R DG LFR M + D T+ +++
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 181 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS- 239
G G NA+ V M+ V + + + L+D G+++ + +VFD + + +
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 240 ---VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 296
++ MI G+ G D +F + ++ V P+ +T+ ++ L+ E
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 297 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 335
M+ + P Y T++ R G+ + +I+ M
Sbjct: 564 KKMKEDGPL-PNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 122/276 (44%), Gaps = 20/276 (7%)
Query: 107 FSKNLVIESLMKAGECDIARKVFDKM------PVRDVVTWNTLIGGYVKNVRFLDGLRLF 160
++ N++I + + +A + KM P +VT ++L+ GY R D + L
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVALV 178
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
M+ PD TF +++ G A + M+++ + N + +V+ K
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 221 GRIDVSKQVFDTVA----RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
G D++ + + + V ++N +I+ L + DA+ +F ME + + P+ +T+
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 277 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM- 335
++ G ++ + + M + I P L + ++D + G EA + M
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 336 --PVEPDVVIWRALLSACRIHGK----KELAEFAIA 365
++PD+ + +L++ +H + K++ EF ++
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 148/306 (48%), Gaps = 23/306 (7%)
Query: 67 KLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV------MDTFSKNLVIESLMKAG 120
+++ G+ +++ + Q +A + ++ +D +++I+ L K G
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 121 ECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 176
D A +F++M ++ D++T+NTLIGG+ R+ DG +L R M+ ++ P+ TF+
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFS 337
Query: 177 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV--- 233
++ + G L A + M+++ + N I +L+D + K R++ + Q+ D +
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 234 -ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEG 292
+ +N +ING D + +F M + V+ +++T+ +++ G +
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 293 REHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM---IKAMPVEPDVVIWRALLS 349
++ F M +R ++P + Y ++D L G LE+A + I+ +E D+ I+ +
Sbjct: 458 KKLFQEMVSR-RVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII-- 514
Query: 350 ACRIHG 355
IHG
Sbjct: 515 ---IHG 517
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 145/340 (42%), Gaps = 27/340 (7%)
Query: 31 ITQRSSHSLTD-HSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYAR 89
I R ++ D + +F + + + + + +K I H T ++ +I+ + R
Sbjct: 80 IQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYT----LSIMINCFCR 135
Query: 90 CHQPHIAHHVFSRVMDT-FSKNLVIESLMKAG---ECDI--ARKVFDKM------PVRDV 137
C + A ++M + + VI + + G EC + A ++ D+M P +
Sbjct: 136 CRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPT--L 193
Query: 138 VTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGL 197
+T NTL+ G N + D + L M+ +P+ T+ V+ + G A +
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 198 MLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA----RDHVSVWNAMINGLAVHGL 253
M E+ +KL+ + + ++D K G +D + +F+ + + + +N +I G G
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 254 ALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYG 313
D + M + P+ +TF ++ + G + E + M R I P Y
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG-IAPNTITYN 372
Query: 314 TMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSA 350
+++D + LEEA M+ M +PD++ + L++
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 90/186 (48%), Gaps = 8/186 (4%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDV----VTWNTLIGGYVKNVRFLDGLRLF 160
D + N++I KA D ++F +M +R V VT+NTL+ G+ ++ + +LF
Sbjct: 402 DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
+ M+S V PD ++ ++ G G L A + G + + +++L+ + ++
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNA 521
Query: 221 GRIDVSKQVFDTVARDHVSV----WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
++D + +F ++ V + +N MI+ L A +F +M E PD +T+
Sbjct: 522 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 277 VGILKA 282
+++A
Sbjct: 582 NILIRA 587
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 115/249 (46%), Gaps = 13/249 (5%)
Query: 182 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVW 241
C + AL A+ VH + L+ +++MY+ C D + VF+ + + + W
Sbjct: 122 CGEVEALEEARVVHDCI----TPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETW 177
Query: 242 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 301
MI LA +G AI +F+R E PD F + AC G +NEG HF M
Sbjct: 178 GTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYR 237
Query: 302 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAE 361
+ + +E Y ++++L G+L+EA + ++ M VEP V +W L++ C + G EL +
Sbjct: 238 DYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGD 297
Query: 362 FAIANISRLESGDFVLLSN--MYCSLKNWHNAERVRNMMKIGGVRKKRGKSWIELGDSIH 419
I +L++ SN + + + E+++ + +R K +H
Sbjct: 298 RFAELIKKLDASRMSKESNAGLVAAKASDSAMEKLKELRYCQMIRDDPKK-------RMH 350
Query: 420 QFNAADQSH 428
+F A D SH
Sbjct: 351 EFRAGDTSH 359
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 80/196 (40%), Gaps = 26/196 (13%)
Query: 72 GY-ATYPSLV--AALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKV 128
GY +P L+ A L + + H + +D S + VIE D A V
Sbjct: 107 GYIVDFPRLLGLAKLCGEVEALEEARVVHDCIT-PLDARSYHTVIEMYSGCRSTDDALNV 165
Query: 129 FDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGAL 188
F++MP R+ TW T+I KN + +F + +PD F +V C +G +
Sbjct: 166 FNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDI 225
Query: 189 CNAKWVH--------GLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR----D 236
N +H G++L +N +++M A CG +D + D V R
Sbjct: 226 -NEGLLHFESMYRDYGMVLSMEDYVN------VIEMLAACGHLD---EALDFVERMTVEP 275
Query: 237 HVSVWNAMINGLAVHG 252
V +W ++N V G
Sbjct: 276 SVEMWETLMNLCWVQG 291
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 129/263 (49%), Gaps = 12/263 (4%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLF 160
D + V+ L K G+ D+A + KM DVV +NT+I G K D L LF
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
M + + PD FT++S+++ G +A + M+E+++ N + +AL+D + K
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 221 GRIDVSKQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
G++ +++++D + + + ++++ING +H +A +F M ++ P+ +T+
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 401
Query: 277 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM- 335
++K V EG E F M R L+ + Y T++ +A + + A + K M
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT-YTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 336 --PVEPDVVIWRALLSACRIHGK 356
V P+++ + LL +GK
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGK 483
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 158/345 (45%), Gaps = 25/345 (7%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKM------PVRDVVTWNTLIGGYVKNVRFLDGLR 158
D ++ ++ I + + +A V KM P D+VT ++L+ GY + R D +
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEP--DIVTLSSLLNGYCHSKRISDAVA 174
Query: 159 LFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYA 218
L M+ +PD FTF +++ G A + M+++ + + + +V+
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 219 KCGRIDVSKQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSI 274
K G ID++ + + + + ++N +I+GL + DA+ +F+ M+ + + PD
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 275 TFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKA 334
T+ ++ + G ++ + M R I P + + ++D + G L EA +
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 335 M---PVEPDVVIWRALLSACRIHGKKELAE--FAIANISRLESGDFVLLSNMYCSLKNWH 389
M ++PD+ + +L++ +H + + A+ F + IS+ + V S + +K +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM-ISKDCFPNVVTYSTL---IKGFC 409
Query: 390 NAERVRNMMKIGGVRKKRG--KSWIELGDSIHQ-FNAADQSHAEM 431
A+RV M++ +RG + + IH F A D +A+M
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 132/300 (44%), Gaps = 47/300 (15%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLF 160
D F+ + +I L G A ++ M R +VVT++ LI +VK + ++ +L+
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
M+ ++PD FT++S++ G L AK + LM+ K N + + L+ + K
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 221 GRIDVSKQVF----------DTV-----------ARD------------------HVSVW 241
R++ ++F +TV ARD ++ +
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 242 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 301
N +++GL +G A+ VF ++ + PD T+ +++ G V +G E F +
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 302 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE---PDVVIWRALLSACRIHGKKE 358
+ + P + Y TM+ R G+ EEA +++K M + P+ + L+ A G +E
Sbjct: 532 KG-VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 590
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 146/317 (46%), Gaps = 20/317 (6%)
Query: 110 NLVIESLMKAGECDIARKVFDKMP----VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 165
NL+I L++A +IA+ VF ++ + DV T+N L+ Y K+ + + L++ M +
Sbjct: 789 NLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMST 848
Query: 166 AEVEPDGFTFASVVTGCARLGALCNA-KWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
E E + T V++G + G + +A + LM ++ L+D +K GR+
Sbjct: 849 HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 908
Query: 225 VSKQVF----DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL 280
+KQ+F D R + +++N +ING G A A A+F RM E V PD T+ ++
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Query: 281 KACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---- 336
G V+EG +F ++ L P + Y +++ LG++ LEEA + M
Sbjct: 969 DCLCMVGRVDEGLHYFKELKESGL-NPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRG 1027
Query: 337 VEPDVVIWRALLSACRIHGKKELAEFAIANISR--LESGDFV---LLSNMYCSLKNWHNA 391
+ PD+ + +L+ I G E A I R LE F L+ S K H A
Sbjct: 1028 ITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEH-A 1086
Query: 392 ERVRNMMKIGGVRKKRG 408
V M GG G
Sbjct: 1087 YAVYQTMVTGGFSPNTG 1103
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 112/241 (46%), Gaps = 11/241 (4%)
Query: 105 DTFSKNLVIESLMKAGECDIARKV-FDKMPVRD----VVTWNTLIGGYVKNVRFLDGLRL 159
+T + N+VI L+KAG D A + +D M RD T+ LI G K+ R + +L
Sbjct: 854 NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL 913
Query: 160 FRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAK 219
F GML P+ + ++ G + G A + M+++ V+ + + LVD
Sbjct: 914 FEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 973
Query: 220 CGRIDVS----KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVE-NVLPDSI 274
GR+D K++ ++ V +N +INGL +A+ +F+ M+ + PD
Sbjct: 974 VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY 1033
Query: 275 TFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKA 334
T+ ++ G+V E + +N +Q R ++P + + ++ +G E A + +
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQ-RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQT 1092
Query: 335 M 335
M
Sbjct: 1093 M 1093
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 110/258 (42%), Gaps = 12/258 (4%)
Query: 103 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVV----TWNTLIGGYVKNVRFLDGLR 158
V D + +++++L KAG A D M + ++ T+NTLI G ++ R D L
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 419
Query: 159 LFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYA 218
LF M S V+P +T+ + + G +A M K + N + A + A
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 479
Query: 219 KCGRIDVSKQVF----DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSI 274
K GR +KQ+F D +N M+ + G +AI + S M PD I
Sbjct: 480 KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVI 539
Query: 275 TFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKA 334
++ V+E + F M+ L +P + Y T++ LG+ G ++EA + +
Sbjct: 540 VVNSLINTLYKADRVDEAWKMFMRMKEMKL-KPTVVTYNTLLAGLGKNGKIQEAIELFEG 598
Query: 335 M---PVEPDVVIWRALLS 349
M P+ + + L
Sbjct: 599 MVQKGCPPNTITFNTLFD 616
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 114/253 (45%), Gaps = 19/253 (7%)
Query: 55 SMDSTTAAKTHAKLIVHGYATYPSLVAALISTY--ARCHQPHIAHHVF------SRVMDT 106
S DS +A +T K+ G A P++VA S Y A+ + A +F V D+
Sbjct: 446 SGDSVSALETFEKMKTKGIA--PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503
Query: 107 FSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRG 162
+ N++++ K GE D A K+ +M DV+ N+LI K R + ++F
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
M +++P T+ +++ G + G + A + M++K N I L D K
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 623
Query: 223 IDVS-KQVF---DTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVG 278
+ ++ K +F D V +N +I GL +G +A+ F +M+ + V PD +T
Sbjct: 624 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCT 682
Query: 279 ILKACSHCGLVNE 291
+L L+ +
Sbjct: 683 LLPGVVKASLIED 695
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 124/258 (48%), Gaps = 16/258 (6%)
Query: 100 FSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLD 155
F V++ +S N +I L+K+ C A +V+ +M + + T+++L+ G K
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 156 GLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVD 215
+ L + M + ++P+ +TF + R G + A + M ++ + + L+D
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 216 MYAKCGRIDVSKQVFDTVAR-----DHVSVWNAMINGLAVHGLALDAIAVF-SRMEVENV 269
++D +K+VF+ + D V+ + +++ + LD++ F S ME +
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVT-YITLLDRFS-DNRDLDSVKQFWSEMEKDGH 359
Query: 270 LPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEAC 329
+PD +TF ++ A G E + ++M+++ ++ P L Y T++ L R L++A
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL-PNLHTYNTLICGLLRVHRLDDAL 418
Query: 330 NM---IKAMPVEPDVVIW 344
+ ++++ V+P +
Sbjct: 419 ELFGNMESLGVKPTAYTY 436
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 133/280 (47%), Gaps = 14/280 (5%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLF 160
D F+ V+ L K G+ D+A + KM DVV + T+I D L LF
Sbjct: 219 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLF 278
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
M + + P+ T+ S++ G +A + M+E+++ N + +AL+D + K
Sbjct: 279 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 338
Query: 221 GRIDVSKQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
G++ +++++D + + + ++++ING +H +A +F M ++ P+ +T+
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 277 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM- 335
++K V EG E F M R L+ + Y T++ L +AG+ + A + K M
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT-YNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 336 --PVEPDVVIWRALLSACRIHGK--KELAEFAIANISRLE 371
V PD++ + LL +GK K L F S++E
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 172/384 (44%), Gaps = 34/384 (8%)
Query: 4 ETRTMLIKLQRLIHGAIKFGSLSESWSITQR------SSHSLTDHSVFHRVLQRSRASMD 57
E + + LIHG SE+ ++ R T +V + + +R +
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 58 STTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHI--AHHVFSRV------MDTFSK 109
+ K I Y +++ AL C+ ++ A ++F+ + + +
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDAL------CNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 110 NLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 165
N +I L G A ++ M R +VVT++ LI +VK + ++ +L+ M+
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 166 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 225
++PD FT++S++ G L AK + LM+ K N + L+ + K R++
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 226 SKQVFDTVAR----DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
++F +++ + +N +I GL G A +F +M + V PD IT+ +L
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 282 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VE 338
G + + F +Q + ++P + Y M++ + +AG +E+ ++ ++ V+
Sbjct: 474 GLCKYGKLEKALVVFEYLQ-KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Query: 339 PDVVIWRALLSA-CRIHGKKELAE 361
P+V+I+ ++S CR G KE A+
Sbjct: 533 PNVIIYTTMISGFCR-KGLKEEAD 555
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 123/288 (42%), Gaps = 47/288 (16%)
Query: 9 LIKLQRLIHGAIKFGSLSESWSITQRSSHSLTDHSVF-HRVLQRSRASMDSTTAAKTHAK 67
++ LI +K G L E+ + D +F + L D AK +
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384
Query: 68 LIVHGYATYPSLVA--ALISTYARCHQPHIAHHVFSR------VMDTFSKNLVIESLMKA 119
L++ +P++V LI + + + +F V +T + N +I+ L +A
Sbjct: 385 LMISK-DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443
Query: 120 GECDIARKVFDKM-----PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFT 174
G+CD+A+K+F KM P D++T++ L+ G K + L +F + +++EPD +T
Sbjct: 444 GDCDMAQKIFKKMVSDGVP-PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 175 FASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA 234
+ ++ G + G + + + + K VK N I
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI-------------------------- 536
Query: 235 RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
++ MI+G GL +A A+F M+ + LP+S T+ +++A
Sbjct: 537 -----IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 126/261 (48%), Gaps = 12/261 (4%)
Query: 111 LVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSA 166
+V+ L K G+ D+A + +KM DVV +NT+I K D L LF+ M +
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 167 EVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS 226
+ P+ T++S+++ G +A + M+EK++ N + AL+D + K G+ +
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 227 KQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
+++ D + + + +N++ING +H A +F M ++ PD T+ ++K
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 283 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEP 339
V +G E F M +R L+ + Y T++ L G+ + A + K M V P
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVT-YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 340 DVVIWRALLSACRIHGKKELA 360
D++ + LL +GK E A
Sbjct: 394 DIMTYSILLDGLCNNGKLEKA 414
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 120/279 (43%), Gaps = 11/279 (3%)
Query: 67 KLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDT--FSKNLVIESLMKAGECDI 124
K I T+ +L+ A + + + R +D F+ N +I D
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 125 ARKVFDKMPVRDVV----TWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 180
A+++F+ M +D T+NTLI G+ K+ R DG LFR M + D T+ +++
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 181 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS- 239
G G NA+ V M+ V + + + L+D G+++ + +VFD + + +
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 240 ---VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 296
++ MI G+ G D +F + ++ V P+ +T+ ++ L+ E
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 297 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 335
M+ + P Y T++ R G+ + +I+ M
Sbjct: 489 KKMKEDGPL-PDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 125/277 (45%), Gaps = 22/277 (7%)
Query: 107 FSKNLVIESLMKAGECDIARKVFDKM------PVRDVVTWNTLIGGYVKNVRFLDGLRLF 160
++ N++I + + +A + KM P +VT ++L+ GY R D + L
Sbjct: 46 YTYNILINCFCRRSQISLALALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVALV 103
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
M+ PD TF +++ G A + M+++ + N + +V+ K
Sbjct: 104 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 163
Query: 221 GRIDVSKQVFDTVA----RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
G ID++ + + + V ++N +I+ L + DA+ +F ME + + P+ +T+
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 277 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEA----CNMI 332
++ G ++ + + M + I P L + ++D + G EA +MI
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 282
Query: 333 KAMPVEPDVVIWRALLSACRIHGK----KELAEFAIA 365
K ++PD+ + +L++ +H + K++ EF ++
Sbjct: 283 KR-SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 318
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 167/377 (44%), Gaps = 39/377 (10%)
Query: 17 HGAIKFGSLSESWSITQRSSHSLTDHSVFHRVLQR-SRASMDSTTAAKTH---AKLIVHG 72
+ ++ F SL E++ + +S SVF V++ SR S+ + H A + G
Sbjct: 115 YASLVFKSLQETYDLCYSTS------SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPG 168
Query: 73 YATYPSLVAALISTYARCHQPHIAHHVFSRVMDT------FSKNLVIESLMKAGECDIAR 126
+Y +++ A I + A +VF ++++ F+ N++I AG D+A
Sbjct: 169 VLSYNAVLDATIRSK---RNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVAL 225
Query: 127 KVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
+FDKM + +VVT+NTLI GY K + DG +L R M +EP+ ++ V+ G
Sbjct: 226 TLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGL 285
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR----DHV 238
R G + +V M + L+ + L+ Y K G + + + R V
Sbjct: 286 CREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSV 345
Query: 239 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 298
+ ++I+ + G A+ +M V + P+ T+ ++ S G +NE
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 299 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSA-CRIH 354
M + P + Y +++ G +E+A +++ M + PDVV + +LS CR +
Sbjct: 406 MNDNGF-SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 355 G-------KKELAEFAI 364
K+E+ E I
Sbjct: 465 DVDEALRVKREMVEKGI 481
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 119/269 (44%), Gaps = 30/269 (11%)
Query: 96 AHHVFSRVMDT-FSKNLVIESLMKAGEC-----DIARKVFDKMPVR----DVVTWNTLIG 145
A+ V + D FS ++V + + G C + A V + M + DVV+++T++
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 146 GYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKL 205
G+ ++ + LR+ R M+ ++PD T++S++ G A ++ ML +
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Query: 206 NYILSAALVDMYAKCGRIDVSKQVFDTVARD----HVSVWNAMINGLAVHGLALDAIAVF 261
+ AL++ Y G ++ + Q+ + + V ++ +INGL +A +
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Query: 262 SRMEVENVLPDSITFVGILKACSHC---------------GLVNEGREHFNIMQNRFLIQ 306
++ E +P +T+ +++ CS+ G++ E + F M + +
Sbjct: 579 LKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH-K 637
Query: 307 PQLEHYGTMVDLLGRAGNLEEACNMIKAM 335
P Y M+ RAG++ +A + K M
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 184/426 (43%), Gaps = 34/426 (7%)
Query: 10 IKLQRLIHGAIKFGSLSESWSITQR--SSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAK 67
I LI G K G + +++ + ++ S T+ V+ +++ K +
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 68 LIVHGYATYPSLVAALISTYARCH----QPHIAHHVFSR------VMDTFSKNLVIESLM 117
+I + P L L++TY C +P +F V D S +++I L+
Sbjct: 508 MINQNCS--PDL--QLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 118 KAGECDIARKVFDKMP----VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGF 173
KAG + ++F M V D +N +I G+ K + +L M + EP
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 174 TFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV 233
T+ SV+ G A++ L A + KR++LN ++ ++L+D + K GRID + + + +
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 234 ARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 289
+ ++ WN++++ L +A+ F M+ P+ +T+ ++
Sbjct: 684 MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743
Query: 290 NEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM---IKAMPVEPDVVIWRA 346
N+ + MQ + + +P Y TM+ L +AGN+ EA + KA PD + A
Sbjct: 744 NKAFVFWQEMQKQGM-KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802
Query: 347 LLSACRIHGKKELAEFAIANISRLESGDFVLLSNMYCS--LKNWHNAERVRNMMKIGGVR 404
++ +G + + F++ +R + + N C L H + + +G V
Sbjct: 803 MIEGLS-NGNRAMDAFSLFEETRRRG---LPIHNKTCVVLLDTLHKNDCLEQAAIVGAVL 858
Query: 405 KKRGKS 410
++ GK+
Sbjct: 859 RETGKA 864
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 114/252 (45%), Gaps = 12/252 (4%)
Query: 110 NLVIESLMKAGECDIARKVFDKMP----VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 165
N++I+ L +AG+ D A ++ D M +V T N ++ K+ + + +F M
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY 440
Query: 166 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 225
PD TF S++ G ++G + +A V+ ML+ + N I+ +L+ + GR +
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500
Query: 226 SKQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
+++ + + S + N ++ + G A+F ++ +PD+ ++ ++
Sbjct: 501 GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560
Query: 282 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPV---E 338
G NE E F M+ + + Y ++D + G + +A +++ M E
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVL-DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Query: 339 PDVVIWRALLSA 350
P VV + +++
Sbjct: 620 PTVVTYGSVIDG 631
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/366 (19%), Positives = 150/366 (40%), Gaps = 25/366 (6%)
Query: 14 RLIHGAIKFGSLSESWSITQ--RSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVH 71
++ G +K L E + + Q R S + ++ A S ++
Sbjct: 138 EMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQEL 197
Query: 72 GYATYPSLVAALISTYARCHQPHIAHHVFSRV------MDTFSKNLVIESLMKAGECDIA 125
GY L LI +A+ + A + + D N+ I+S K G+ D+A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 126 RKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTG 181
K F ++ D VT+ ++IG K R + + +F + P + + +++ G
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317
Query: 182 CARLGALCNAKWVHGLMLEKRVK---LNYILSAALVDMYAKCGRIDVSKQVFDTVARD-- 236
G A + L+ +R K + I ++ K G++D + +VF+ + +D
Sbjct: 318 YGSAGKFDEA---YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA 374
Query: 237 -HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREH 295
++S +N +I+ L G A + M+ + P+ T ++ ++E
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAM 434
Query: 296 FNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSACR 352
F M + + P + +++D LG+ G +++A + + M + +++ +L+
Sbjct: 435 FEEMDYK-VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFF 493
Query: 353 IHGKKE 358
HG+KE
Sbjct: 494 NHGRKE 499
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 176/407 (43%), Gaps = 31/407 (7%)
Query: 17 HGAIKFGSLSESWSITQRSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATY 76
HG K+ E ++ RS S D + + +L + D K + +
Sbjct: 318 HG--KYERAKEVFAEMLRSGLS-PDSTTYRSLLMEACKKGDVVETEKVFSDM--RSRDVV 372
Query: 77 PSLV--AALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKV 128
P LV ++++S + R A F+ V D ++I+ + G +A +
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 129 FDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
++M + DVVT+NT++ G K + +LF M + PD +T ++ G +
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVF-DTVARDHVSV--- 240
LG L NA + M EKR++L+ + L+D + K G ID +K+++ D V+++ +
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 241 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 300
++ ++N L G +A V+ M +N+ P + ++K G ++G M
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 301 NRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE-----PDVVIWRALLSA-CRIH 354
+ + P Y T++ R N+ +A ++K M E PDV + ++L CR +
Sbjct: 613 SEGFV-PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 355 GKKELAEFAIANISRLESGD---FVLLSNMYCSLKNWHNAERVRNMM 398
KE I R + D + + N + S N A R+ + M
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 136/310 (43%), Gaps = 18/310 (5%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRD----VVTWNTLIGGYVKNVRFLDGLRLF 160
D + N +I + G + A ++ + MP + V T+NT+I G K+ ++ +F
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
ML + + PD T+ S++ + G + + V M + V + + ++++ ++ +
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 221 GRIDVSKQVFDTVAR-----DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSIT 275
G +D + F++V D+V ++ +I G G+ A+ + + M + D +T
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNV-IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 276 FVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 335
+ IL ++ E + FN M R L P ++D + GNL+ A + + M
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALF-PDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Query: 336 P---VEPDVVIWRALLSACRIHGKKELAEFAIANISRLE----SGDFVLLSNMYCSLKNW 388
+ DVV + LL G + A+ A++ E + +L N CS +
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566
Query: 389 HNAERVRNMM 398
A RV + M
Sbjct: 567 AEAFRVWDEM 576
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 212 ALVDMYAKCGRIDVSKQVFDTVARDHVSV----WNAMINGLAVHGLALDAIAVFSRMEVE 267
AL+ + G ++++ V+ ++R V + N M+N L G S+++ +
Sbjct: 205 ALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEK 264
Query: 268 NVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEE 327
V PD +T+ ++ A S GL+ E E N M + P + Y T+++ L + G E
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGF-SPGVYTYNTVINGLCKHGKYER 323
Query: 328 ACNMIKAM---PVEPDVVIWRALL-SACR 352
A + M + PD +R+LL AC+
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACK 352
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 171/374 (45%), Gaps = 36/374 (9%)
Query: 15 LIHGAIKFGSLSESWSITQR------SSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKL 68
LIHG + SE+ ++ R +T V + + +R + + K
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK 251
Query: 69 IVHGYATYPSLVAALISTYARCHQPHI--AHHVFSRV------MDTFSKNLVIESLMKAG 120
I G Y +++ AL C+ ++ A ++F+ + + + N +I L G
Sbjct: 252 IEPGVVIYNTIIDAL------CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 305
Query: 121 ECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 176
A ++ M R +VVT++ LI +VK + ++ +L+ M+ ++PD FT++
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 365
Query: 177 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD 236
S++ G L AK + LM+ K N + L+ + K R+D ++F +++
Sbjct: 366 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425
Query: 237 HVSVWNAMINGLAVHGL-----ALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 291
+ V N + +HG +A VF +M + VLPD +T+ +L + G V
Sbjct: 426 GL-VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
Query: 292 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALL 348
F +Q R ++P + Y M++ + +AG +E+ ++ ++ V+P+VV + ++
Sbjct: 485 ALVVFEYLQ-RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 543
Query: 349 SA-CRIHGKKELAE 361
S CR G KE A+
Sbjct: 544 SGFCR-KGLKEEAD 556
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 143/307 (46%), Gaps = 24/307 (7%)
Query: 76 YPSLV--AALISTYARCHQPHIAHHVFSRVMDT------FSKNLVIESLMKAGECDIARK 127
+PS+V + L+S A+ ++ + + ++ + ++ +++I + + +A
Sbjct: 78 FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALA 137
Query: 128 VFDKM------PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTG 181
V KM P D+VT N+L+ G+ R D + L M+ +PD FTF +++ G
Sbjct: 138 VLAKMMKLGYEP--DIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHG 195
Query: 182 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS-- 239
R A + M+ K + + + +V+ K G ID++ + + + +
Sbjct: 196 LFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
Query: 240 --VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 297
++N +I+ L + DA+ +F+ M+ + + P+ +T+ +++ + G ++ +
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 298 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSACRIH 354
M R I P + + ++D + G L EA + M ++PD+ + +L++ +H
Sbjct: 316 DMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 355 GKKELAE 361
+ + A+
Sbjct: 375 DRLDEAK 381
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 105/216 (48%), Gaps = 14/216 (6%)
Query: 81 AALISTYARCHQPHIAHHVFSRVM--DTF----SKNLVIESLMKAGECDIARKVFDKMPV 134
++LI+ + + A H+F ++ D F + N +I+ KA D ++F +M
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 135 R----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCN 190
R + VT+ TLI G+ + + +F+ M+S V PD T++ ++ G G +
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
Query: 191 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA----RDHVSVWNAMIN 246
A V + +++ + +++ K G+++ +F +++ + +V + M++
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 544
Query: 247 GLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
G GL +A A+F M+ E LPDS T+ +++A
Sbjct: 545 GFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 118/234 (50%), Gaps = 9/234 (3%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLF 160
D FS N +++++ K G+ D+A ++ +MPV+ +VV+++T+I G+ K RF + L LF
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
M + D ++ ++++ ++G A + M +K + + AL+ Y K
Sbjct: 433 GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQ 492
Query: 221 GRIDVSKQVFDTVARDHV----SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
G+ D K+VF + R+HV ++ +I+G + GL +A+ +F + + D + +
Sbjct: 493 GKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLY 552
Query: 277 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACN 330
++ A GLV + M I P + Y +++D GR+ ++ + +
Sbjct: 553 SALIDALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 21/311 (6%)
Query: 59 TTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDT------FSKNLV 112
T A + GY +ALIS Y R A VF+ + + + N V
Sbjct: 250 TIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAV 309
Query: 113 IESLMKAG-ECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAE 167
I++ K G E K FD+M D +T+N+L+ + + LF M +
Sbjct: 310 IDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR 369
Query: 168 VEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSK 227
+E D F++ +++ + G + A + M KR+ N + + ++D +AK GR D +
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEAL 429
Query: 228 QVFDT-----VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
+F +A D VS +N +++ G + +A+ + M + D +T+ +L
Sbjct: 430 NLFGEMRYLGIALDRVS-YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG 488
Query: 283 CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM---IKAMPVEP 339
G +E ++ F M+ ++ P L Y T++D + G +EA + K+ +
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHVL-PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRA 547
Query: 340 DVVIWRALLSA 350
DVV++ AL+ A
Sbjct: 548 DVVLYSALIDA 558
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 125/293 (42%), Gaps = 48/293 (16%)
Query: 79 LVAALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKVFDKM 132
L +A+IST R + IA +F ++ + +I + ++G + A VF+ M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 133 PV----RDVVTWNTLIGGYVKN-VRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGA 187
++VT+N +I K + F + F M V+PD TF S++ C+R G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 188 LCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWNAMING 247
A+ + M +R++ + L+D K G++D+
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDL---------------------- 392
Query: 248 LAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL-IQ 306
A + ++M V+ ++P+ +++ ++ + G +E F M R+L I
Sbjct: 393 ---------AFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM--RYLGIA 441
Query: 307 PQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSACRIHGK 356
Y T++ + + G EEA ++++ M ++ DVV + ALL GK
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGK 494
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 200 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV----ARDHVSVWNAMINGLAVHGLAL 255
E+R L++A++ + G++ ++K++F+T + V ++A+I+ GL
Sbjct: 226 ERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHE 285
Query: 256 DAIAVFSRMEVENVLPDSITFVGILKACSHCGL-VNEGREHFNIMQNRFLIQPQLEHYGT 314
+AI+VF+ M+ + P+ +T+ ++ AC G+ + + F+ MQ R +QP + +
Sbjct: 286 EAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ-RNGVQPDRITFNS 344
Query: 315 MVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSACRIHGKKELA 360
++ + R G E A N+ M +E DV + LL A G+ +LA
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 103 VMDTFSKNLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLR 158
+D S N ++ K G + A + +M +DVVT+N L+GGY K ++ + +
Sbjct: 441 ALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKK 500
Query: 159 LFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYA 218
+F M V P+ T+++++ G ++ G A + ++ + +L +AL+D
Sbjct: 501 VFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALC 560
Query: 219 KCGRIDVSKQVFDTVARDHVS----VWNAMINGLA 249
K G + + + D + ++ +S +N++I+
Sbjct: 561 KNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFG 595
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 139/304 (45%), Gaps = 20/304 (6%)
Query: 73 YATYPSLVAALISTYARCHQPHIAHHVFSRVMD------TFSKNLVIESLMKAGECDIAR 126
+ +Y ++ L+S CH+ +A +VF ++ F+ +V+++ E D A
Sbjct: 182 FKSYNVVLEILVS--GNCHK--VAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSAL 237
Query: 127 KVFDKMP----VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
+ M V + V + TLI K R + L+L M PD TF V+ G
Sbjct: 238 SLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 297
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSVWN 242
+ + A + ML + + I L++ K GR+D +K +F + + + ++N
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFN 357
Query: 243 AMINGLAVHGLALDAIAVFSRMEVE-NVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 301
+I+G HG DA AV S M ++PD T+ ++ GLV E + M+N
Sbjct: 358 TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRN 417
Query: 302 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSA-CRIHGKK 357
+ +P + Y +VD + G ++EA N++ M ++P+ V + L+SA C+ H
Sbjct: 418 KG-CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIP 476
Query: 358 ELAE 361
E E
Sbjct: 477 EAVE 480
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 124/260 (47%), Gaps = 20/260 (7%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLF 160
+ +S ++++ K G+ D A V ++M + V +N LI + K R + + +F
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
R M +PD +TF S+++G + + +A W+ M+ + V N + L++ + +
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRR 542
Query: 221 GRID-----VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSIT 275
G I V++ VF D ++ +N++I GL G A ++F +M + P +I+
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEIT-YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 276 FVGILKACSHCGLVNEGREHFNIMQNRFLIQ---PQLEHYGTMVDLLGRAGNLEEACNMI 332
++ G+V E E Q +++ P + + ++++ L RAG +E+ M
Sbjct: 602 CNILINGLCRSGMVEEAVE----FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF 657
Query: 333 KAMPVE---PDVVIWRALLS 349
+ + E PD V + L+S
Sbjct: 658 RKLQAEGIPPDTVTFNTLMS 677
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 140/305 (45%), Gaps = 24/305 (7%)
Query: 77 PSLVAALISTYARC--HQPHIAHHVFSRVMDT-FSKNLVIESLMKAGEC-----DIARKV 128
P L I + C QP A ++M F +LV + + G C + A +
Sbjct: 116 PLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIAL 175
Query: 129 FDKM------PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
FD++ P +VVT+ TLI KN + LF M + P+ T+ ++VTG
Sbjct: 176 FDQILGMGFKP--NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGL 233
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR----DHV 238
+G +A W+ M+++R++ N I AL+D + K G++ +K++++ + + V
Sbjct: 234 CEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV 293
Query: 239 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 298
+ ++INGL ++GL +A +F ME P+ + + ++ V +G + F
Sbjct: 294 FTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYE 353
Query: 299 MQNRFLIQPQLEHYGTMVD---LLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHG 355
M + ++ + Y ++ L+GR +E N + + PD+ + LL +G
Sbjct: 354 MSQKGVVANTIT-YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNG 412
Query: 356 KKELA 360
K E A
Sbjct: 413 KVEKA 417
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 135/299 (45%), Gaps = 27/299 (9%)
Query: 74 ATYPSLVAALISTYARCHQPHIAHHV--FSRVMDTFSK-NLVIESLMKAGECDIAR---- 126
TY +L+ L C H+ H V F+++ S+ N+V + + G C+I R
Sbjct: 189 VTYTTLIRCL------CKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 127 --KVFDKMPVR---DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTG 181
+ D M R +V+T+ LI +VK + ++ L+ M+ V PD FT+ S++ G
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 182 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS-- 239
G L A+ + LM N ++ L+ + K R++ ++F +++ V
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 240 --VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 297
+ +I G + G A VF++M PD T+ +L G V + F
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 298 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSA-CR 352
M+ R + + Y ++ + + G +E+A ++ ++ ++P+V+ + ++S CR
Sbjct: 423 YMRKREM-DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 100/239 (41%), Gaps = 44/239 (18%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMP----VRDVVTWNTLIGGYVKNVRFLDGLRLF 160
D F+ +I L G D AR++F M + V + TLI G+ K+ R DG+++F
Sbjct: 292 DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF 351
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
M +K V N I L+ Y
Sbjct: 352 YE-----------------------------------MSQKGVVANTITYTVLIQGYCLV 376
Query: 221 GRIDVSKQVFDTV----ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
GR DV+++VF+ + A + +N +++GL +G A+ +F M + + +T+
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY 436
Query: 277 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 335
I++ G V + + F + ++ + +P + Y TM+ R G + EA ++ K M
Sbjct: 437 TIIIQGMCKLGKVEDAFDLFCSLFSKGM-KPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 110/276 (39%), Gaps = 50/276 (18%)
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
D+ ++ P+ ++ + L+ K R+ + LF M + P T ++V C
Sbjct: 69 DLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCT-CNIVMHC 127
Query: 183 ARLGA-LCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV-------- 233
L + C A G M++ + + + +L++ Y RI+ + +FD +
Sbjct: 128 VCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPN 187
Query: 234 -------------------------------ARDHVSVWNAMINGLAVHGLALDAIAVFS 262
+R +V +NA++ GL G DA +
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLR 247
Query: 263 RMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRA 322
M + P+ ITF ++ A G + E +E +N+M + + P + YG++++ L
Sbjct: 248 DMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI-QMSVYPDVFTYGSLINGLCMY 306
Query: 323 GNLEEACNMIKAMP---VEPDVVIWRALLSACRIHG 355
G L+EA M M P+ VI+ L IHG
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTL-----IHG 337
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 76/178 (42%), Gaps = 35/178 (19%)
Query: 103 VMDTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLR 158
V +T + ++I+ G D+A++VF++M R D+ T+N L+ G N + L
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALM 419
Query: 159 LFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYA 218
+F M E++ + T+ ++ G +LG + +A
Sbjct: 420 IFEYMRKREMDINIVTYTIIIQGMCKLGKVEDA--------------------------- 452
Query: 219 KCGRIDVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
D+ +F + +V + MI+G GL +A ++F +M+ + LP+ +
Sbjct: 453 ----FDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 8/245 (3%)
Query: 134 VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKW 193
V +VV +NT+I G KN + L +F M + D T+ ++++G + G +A
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 194 VHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR----DHVSVWNAMINGLA 249
+ M+++++ N I AL+D + K G + ++ ++ + R +V +N++ING
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 250 VHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQL 309
+HG DA +F M + PD +T+ ++ V +G + F M + L+
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 310 EHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSACRIHGKKELAEFAIAN 366
Y T++ +AG L A + M V PD+V + LL +GK E A + +
Sbjct: 361 T-YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419
Query: 367 ISRLE 371
+ + E
Sbjct: 420 LQKSE 424
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 128/271 (47%), Gaps = 13/271 (4%)
Query: 100 FSRVMDTFSKNLVIESLMKAGECDIARKVF---DKMPVR-DVVTWNTLIGGYVKNVRFLD 155
F V + N VI L K + + A +VF +K +R D VT+NTLI G + R+ D
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 156 GLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVD 215
RL R M+ +++P+ F +++ + G L A+ ++ M+ + V N +L++
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 216 MYAKCGRIDVSKQVFDTVARD----HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLP 271
+ G + +K +FD + V +N +I G D + +F M + ++
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 272 DSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNM 331
D+ T+ ++ G +N ++ FN M + + P + Y ++D L G +E+A M
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVD-CGVSPDIVTYNILLDCLCNNGKIEKALVM 416
Query: 332 IKAM---PVEPDVVIWRALLSA-CRIHGKKE 358
++ + ++ D++ + ++ CR KE
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 447
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 8/200 (4%)
Query: 101 SRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDG 156
S V + F+ N +I G A+ +FD M + DVVT+NTLI G+ K+ R DG
Sbjct: 284 SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG 343
Query: 157 LRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDM 216
++LF M + D FT+ +++ G + G L A+ V M++ V + + L+D
Sbjct: 344 MKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC 403
Query: 217 YAKCGRIDVSKQVFDTVARDHVSV----WNAMINGLAVHGLALDAIAVFSRMEVENVLPD 272
G+I+ + + + + + + V +N +I GL +A +F + + V PD
Sbjct: 404 LCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPD 463
Query: 273 SITFVGILKACSHCGLVNEG 292
+I ++ ++ GL E
Sbjct: 464 AIAYITMISGLCRKGLQREA 483
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 120/244 (49%), Gaps = 10/244 (4%)
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
++ +K+ D D+VT N ++ Y ++ L F M A+V PD TF ++
Sbjct: 102 EVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCL 161
Query: 183 ARLGALCNAKWVHGLMLEKRV--KLNYILSAALVDMYAKCGRIDVSKQVFDTVA----RD 236
++LG A + M EKR + + + +++ +Y+ G I+ + VF+ + +
Sbjct: 162 SKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 221
Query: 237 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 296
++ +NA++ AVHG++ A++V ++ ++PD +++ +L + + +E F
Sbjct: 222 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 281
Query: 297 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSACRI 353
+M + +P + Y ++D G G L EA + + M ++P+VV LL+AC
Sbjct: 282 -LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 340
Query: 354 HGKK 357
KK
Sbjct: 341 SKKK 344
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 116/289 (40%), Gaps = 35/289 (12%)
Query: 77 PSLVA--ALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPV 134
P +V+ L+++Y R QP A VF LM E + P
Sbjct: 256 PDVVSYTCLLNSYGRSRQPGKAKEVF---------------LMMRKE--------RRKP- 291
Query: 135 RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWV 194
+VVT+N LI Y N + + +FR M ++P+ + +++ C+R N V
Sbjct: 292 -NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTV 350
Query: 195 HGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS----VWNAMINGLAV 250
+ + LN + + Y ++ + ++ ++ + V + +I+G
Sbjct: 351 LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 410
Query: 251 HGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLE 310
+AI+ ME ++ + +L A S G V E FN M+ +P +
Sbjct: 411 MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG-CEPDVI 469
Query: 311 HYGTMVDLLGRAGNLEEACNM---IKAMPVEPDVVIWRALLSACRIHGK 356
Y +M+ + +AC + ++A +EPD + AL+ A G+
Sbjct: 470 AYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQ 518
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 129/329 (39%), Gaps = 48/329 (14%)
Query: 123 DIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 178
D AR +F +M D T++ LI + + ++ + L ML A + P T+ ++
Sbjct: 28 DQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNL 87
Query: 179 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 238
+ C G W L +V K++ D +
Sbjct: 88 INACGSSG-----NWREAL--------------------------EVCKKMTDNGVGPDL 116
Query: 239 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 298
N +++ A++ F M+ V PD+ TF I+ S G ++ + FN
Sbjct: 117 VTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNS 176
Query: 299 M-QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE---PDVVIWRALLSACRIH 354
M + R +P + + +++ L G +E + +AM E P++V + AL+ A +H
Sbjct: 177 MREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 236
Query: 355 GKKELAEFAIANISR----LESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKS 410
G A + +I + + + L N Y + A+ V MM RK+R K
Sbjct: 237 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM-----RKERRKP 291
Query: 411 WIELGDSIHQFNAADQSHAEMKAIHRVLE 439
+ +++ ++ AE I R +E
Sbjct: 292 NVVTYNALIDAYGSNGFLAEAVEIFRQME 320
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 176/386 (45%), Gaps = 42/386 (10%)
Query: 6 RTMLIKLQRLIHGAIKFGSLSESWSITQR------SSHSLTDHSVFHRVLQRSRASM--- 56
R I LIHG SE+ ++ R + +T V + + +R +
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 57 --DSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDT-FSKNLVI 113
+ AAK A ++++ + +I + + A ++F+ + + N++
Sbjct: 247 LLNKMEAAKIEANVVIY---------STVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 297
Query: 114 ESLMKAGECDIAR-----KVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGML 164
S + + C+ R ++ M R +VVT+N LI +VK + ++ +L+ M+
Sbjct: 298 YSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357
Query: 165 SAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRID 224
++PD FT++S++ G L AK + LM+ K N + L++ + K RID
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 225 VSKQVFDTVARDHVSVWNAMINGLAVHGL-----ALDAIAVFSRMEVENVLPDSITFVGI 279
++F +++ + V N + +HG +A VF +M + V P+ +T+ +
Sbjct: 418 EGVELFREMSQRGL-VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTL 476
Query: 280 LKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP--- 336
L G + + F +Q R ++P + Y M++ + +AG +E+ ++ ++
Sbjct: 477 LDGLCKNGKLEKAMVVFEYLQ-RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 535
Query: 337 VEPDVVIWRALLSA-CRIHGKKELAE 361
V+PDV+I+ ++S CR G KE A+
Sbjct: 536 VKPDVIIYNTMISGFCR-KGLKEEAD 560
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 154/355 (43%), Gaps = 29/355 (8%)
Query: 107 FSKNLVIESLMKAGECDIARKVFDKM------PVRDVVTWNTLIGGYVKNVRFLDGLRLF 160
++ N++I + + +A + KM P +VT ++L+ GY R D + L
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVALV 178
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
M+ PD TF +++ G A + M+++ + N + +V+ K
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 221 GRIDVSKQVFDTVA----RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
G ID++ + + + +V +++ +I+ L + DA+ +F+ ME + V P+ IT+
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 277 VGILKA-CSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 335
++ C++ + R ++++ + I P + + ++D + G L EA + M
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERK--INPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 336 ---PVEPDVVIWRALLSACRIHGK----KELAEFAIANISRLESGDFVLLSNMYCSLKNW 388
++PD+ + +L++ +H + K + E I+ + L N +C K
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 389 -HNAERVRNMMKIGGVRKKRGKSWIELGDSIHQ-FNAADQSHAEMKAIHRVLEGL 441
E R M + G V + + IH F A D +A+M V +G+
Sbjct: 417 DEGVELFREMSQRGLV-----GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 45/246 (18%)
Query: 75 TYPSLVAALISTYARCHQPHIAHHVFSRVMDT--FSKNLVIESLMKAGECDIARKVFDKM 132
T+ +L+ A + + + R +D F+ + +I D A+ +F+ M
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391
Query: 133 PVRD----VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGAL 188
+D VVT+NTLI G+ K R +G+ LFR M + + T+ +++ G +
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Query: 189 CNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH----------- 237
NA+ V M+ V N + L+D K G+++ + VF+ + R
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 238 ----------------------------VSVWNAMINGLAVHGLALDAIAVFSRMEVENV 269
V ++N MI+G GL +A A+F +M +
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGP 571
Query: 270 LPDSIT 275
LPDS T
Sbjct: 572 LPDSGT 577
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 131/281 (46%), Gaps = 15/281 (5%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMP---VR-DVVTWNTLIGGYVKNVRFLDGLRLF 160
D +I+SL K G + A +FD+M +R DVV + +L+ G + R+ D L
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLL 235
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
RGM +++PD TF +++ + G +A+ ++ M+ + N +L++ +
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 221 GRIDVSKQVFDTVAR----DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
G +D ++Q+F + V + ++ING DA+ +F M + + ++IT+
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355
Query: 277 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP 336
+++ G N +E F+ M +R + P + Y ++ L G +++A + + M
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRG-VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ 414
Query: 337 ------VEPDVVIWRALLSACRIHGKKELAEFAIANISRLE 371
V P++ + LL +GK E A ++ + E
Sbjct: 415 KREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKRE 455
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/316 (19%), Positives = 132/316 (41%), Gaps = 53/316 (16%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKM------PVRDVVTWNTLIGGYVKNVRFLDGLR 158
D ++ NL++ ++ + +A KM P D+VT+ +LI G+ R + +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEP--DIVTFTSLINGFCLGNRMEEAMS 163
Query: 159 LFRGMLSAEVEPDGFTFASVVTGCARLG-----------------------------ALC 189
+ M+ ++PD + +++ + G LC
Sbjct: 164 MVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLC 223
Query: 190 NA-KW------VHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR----DHV 238
N+ +W + G M ++++K + I AL+D + K G+ ++++++ + R ++
Sbjct: 224 NSGRWRDADSLLRG-MTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 239 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 298
+ ++ING + G +A +F ME + PD + + ++ C V++ + F
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 299 MQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSACRIHG 355
M + L + Y T++ G+ G A + M V P++ + LL +G
Sbjct: 343 MSQKGLTGNTIT-YTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 356 KKELAEFAIANISRLE 371
K + A ++ + E
Sbjct: 402 KVKKALMIFEDMQKRE 417
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 107/243 (44%), Gaps = 14/243 (5%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLF 160
+ F+ +I G D AR++F M + DVV + +LI G+ K + D +++F
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
M + + T+ +++ G ++G A+ V M+ + V N L+
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Query: 221 GRI--------DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPD 272
G++ D+ K+ D VA ++ +N +++GL +G A+ VF M +
Sbjct: 401 GKVKKALMIFEDMQKREMDGVA-PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIG 459
Query: 273 SITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMI 332
IT+ I++ G V F + ++ ++P + Y TM+ L R G EA +
Sbjct: 460 IITYTIIIQGMCKAGKVKNAVNLFCSLPSKG-VKPNVVTYTTMISGLFREGLKHEAHVLF 518
Query: 333 KAM 335
+ M
Sbjct: 519 RKM 521
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 176/381 (46%), Gaps = 37/381 (9%)
Query: 9 LIKLQRLIHGAIKFGSLSESWSITQR------SSHSLTDHSVFHRVLQRSRASMDSTTAA 62
++ L L++G +SE+ ++ + ++T ++ H + Q ++AS A
Sbjct: 145 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS----EAV 200
Query: 63 KTHAKLIVHGYATYPSLV--AALISTYARCHQPHIAHHVFSRV------MDTFSKNLVIE 114
+++V G P LV A+I+ + +P +A ++ +++ D N +I+
Sbjct: 201 ALVERMVVKG--CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIID 258
Query: 115 SLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEP 170
L K D A +F+KM + DV T+N LI R+ D RL ML + P
Sbjct: 259 GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINP 318
Query: 171 DGFTFASVVTGCARLGALCNAKWVHGLMLE-KRVKLNYILSAALVDMYAKCGRIDVSKQV 229
D F +++ + G L A+ ++ M++ K + + L+ + K R++ +V
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 378
Query: 230 FDTVARDHVSVWNAMINGLAVHGL-----ALDAIAVFSRMEVENVLPDSITFVGILKACS 284
F +++ + V N + +HG +A VF +M + V PD +T+ +L
Sbjct: 379 FREMSQRGL-VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437
Query: 285 HCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDV 341
+ G V F MQ R + + + Y TM++ L +AG +E+ ++ ++ V+P+V
Sbjct: 438 NNGNVETALVVFEYMQKRDM-KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNV 496
Query: 342 VIWRALLSA-CRIHGKKELAE 361
V + ++S CR G KE A+
Sbjct: 497 VTYTTMMSGFCR-KGLKEEAD 516
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 44/217 (20%)
Query: 110 NLVIESLMKAGECDIARKVFDKMP-----VRDVVTWNTLIGGYVKNVRFLDGLRLFR--- 161
N +I++ +K G+ A K++D+M DVV +NTLI G+ K R +G+ +FR
Sbjct: 324 NALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 162 --------------------------------GMLSAEVEPDGFTFASVVTGCARLGALC 189
M+S V PD T+ ++ G G +
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVE 443
Query: 190 NAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA----RDHVSVWNAMI 245
A V M ++ +KL+ + +++ K G+++ +F +++ + +V + M+
Sbjct: 444 TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Query: 246 NGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
+G GL +A A+F M+ + LP+S T+ +++A
Sbjct: 504 SGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 120/244 (49%), Gaps = 10/244 (4%)
Query: 123 DIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
++ +K+ D D+VT N ++ Y ++ L F M A+V PD TF ++
Sbjct: 234 EVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCL 293
Query: 183 ARLGALCNAKWVHGLMLEKRV--KLNYILSAALVDMYAKCGRIDVSKQVFDTVA----RD 236
++LG A + M EKR + + + +++ +Y+ G I+ + VF+ + +
Sbjct: 294 SKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 353
Query: 237 HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHF 296
++ +NA++ AVHG++ A++V ++ ++PD +++ +L + + +E F
Sbjct: 354 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Query: 297 NIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSACRI 353
+M + +P + Y ++D G G L EA + + M ++P+VV LL+AC
Sbjct: 414 -LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 472
Query: 354 HGKK 357
KK
Sbjct: 473 SKKK 476
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 116/289 (40%), Gaps = 35/289 (12%)
Query: 77 PSLVA--ALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPV 134
P +V+ L+++Y R QP A VF LM E + P
Sbjct: 388 PDVVSYTCLLNSYGRSRQPGKAKEVF---------------LMMRKE--------RRKP- 423
Query: 135 RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWV 194
+VVT+N LI Y N + + +FR M ++P+ + +++ C+R N V
Sbjct: 424 -NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTV 482
Query: 195 HGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS----VWNAMINGLAV 250
+ + LN + + Y ++ + ++ ++ + V + +I+G
Sbjct: 483 LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 542
Query: 251 HGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLE 310
+AI+ ME ++ + +L A S G V E FN M+ +P +
Sbjct: 543 MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG-CEPDVI 601
Query: 311 HYGTMVDLLGRAGNLEEACNM---IKAMPVEPDVVIWRALLSACRIHGK 356
Y +M+ + +AC + ++A +EPD + AL+ A G+
Sbjct: 602 AYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQ 650
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 129/329 (39%), Gaps = 48/329 (14%)
Query: 123 DIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 178
D AR +F +M D T++ LI + + ++ + L ML A + P T+ ++
Sbjct: 160 DQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNL 219
Query: 179 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHV 238
+ C G W L +V K++ D +
Sbjct: 220 INACGSSG-----NWREAL--------------------------EVCKKMTDNGVGPDL 248
Query: 239 SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 298
N +++ A++ F M+ V PD+ TF I+ S G ++ + FN
Sbjct: 249 VTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNS 308
Query: 299 M-QNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE---PDVVIWRALLSACRIH 354
M + R +P + + +++ L G +E + +AM E P++V + AL+ A +H
Sbjct: 309 MREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 368
Query: 355 GKKELAEFAIANISR----LESGDFVLLSNMYCSLKNWHNAERVRNMMKIGGVRKKRGKS 410
G A + +I + + + L N Y + A+ V MM RK+R K
Sbjct: 369 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM-----RKERRKP 423
Query: 411 WIELGDSIHQFNAADQSHAEMKAIHRVLE 439
+ +++ ++ AE I R +E
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQME 452
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 128/260 (49%), Gaps = 12/260 (4%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 165
N +I+ L K D A +F +M + +VVT+++LI R+ D RL M+
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 166 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 225
++ PD FTF++++ + G L A+ ++ M+++ + + + ++L++ + R+D
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 226 SKQVFDTVARDH----VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
+KQ+F+ + H V +N +I G + + + VF M ++ +++T+ +++
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 282 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVE 338
G + +E F M + + P + Y T++D L + G LE+A + + + +E
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 339 PDVVIWRALLSACRIHGKKE 358
P + + ++ GK E
Sbjct: 499 PTIYTYNIMIEGMCKAGKVE 518
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 126/276 (45%), Gaps = 20/276 (7%)
Query: 107 FSKNLVIESLMKAGECDIARKVFDKM------PVRDVVTWNTLIGGYVKNVRFLDGLRLF 160
++ +++I + + +A V KM P ++VT ++L+ GY + R + + L
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEP--NIVTLSSLLNGYCHSKRISEAVALV 174
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
M +P+ TF +++ G A + M+ K + + + +V+ K
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 221 GRIDVSKQVFDTVARDH----VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
G D++ + + + + V ++N +I+GL + DA+ +F ME + + P+ +T+
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 277 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM- 335
++ + G ++ + M R I P + + ++D + G L EA + M
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIER-KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 336 --PVEPDVVIWRALLSACRIHGK----KELAEFAIA 365
++P +V + +L++ +H + K++ EF ++
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 120/282 (42%), Gaps = 47/282 (16%)
Query: 15 LIHGAIKFGSLSESWSITQRSSHSLTDHS-VFHRVLQRSRASMDSTTAAKTHAKLIVHGY 73
LI +K G L E+ + D S V + L D AK + +V +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 74 ATYPSLVA--ALISTYARCHQPHIAHHVFSR------VMDTFSKNLVIESLMKAGECDIA 125
+P +V LI + + + VF V +T + N++I+ L +AG+CD+A
Sbjct: 392 C-FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 126 RKVFDKMPVRD-----VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVT 180
+++F +M V D ++T+NTL+ G KN + + +F + +++EP +T+ ++
Sbjct: 451 QEIFKEM-VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Query: 181 GCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV 240
G + G + + W D++ V + V
Sbjct: 510 GMCKAGKVEDG-W---------------------DLFCNLSLKGV---------KPDVVA 538
Query: 241 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKA 282
+N MI+G G +A A+F M+ + LP+S + +++A
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 134/283 (47%), Gaps = 42/283 (14%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 165
N +I+SL K ++A +F +M + +VVT+N+LI R+ D RL ML
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 166 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 225
++ P+ TF +++ + G L A+ +H M+++ + + I L++ + R+D
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 226 SKQVFD-TVARD---HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
+KQ+F V++D ++ +N +ING D + +F M ++ +++T+ I++
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 282 A------CSHC------------------------GLVNEGREHFNIMQNRFLIQPQLEH 311
C GL + G+ ++ ++L + ++E
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 312 ----YGTMVDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSA 350
Y TM++ + +AG + EA ++ ++ ++PDVV + ++S
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISG 544
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 133/307 (43%), Gaps = 14/307 (4%)
Query: 39 LTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHH 98
+T +S+ + + R S S + K I T+ +L+ A +
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 99 VFSRVMD--TFSKNLVIESLMKAGECDIARKVFDKMPVRD----VVTWNTLIGGYVKNVR 152
+ R +D T + NL+I D A+++F M +D + T+NTLI G+ K R
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 153 FLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAA 212
DG+ LFR M + + T+ +++ G + G +A+ V M+ RV + + +
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Query: 213 LVDMYAKCGRIDVSKQVFDTVARD----HVSVWNAMINGLAVHGLALDAIAVFSRMEVEN 268
L+ G++D + +F + + ++ ++N MI G+ G +A +F + ++
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK- 532
Query: 269 VLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEA 328
PD +T+ ++ L+ E + F M+ + P Y T++ R + +
Sbjct: 533 --PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL-PNSGTYNTLIRANLRDCDRAAS 589
Query: 329 CNMIKAM 335
+IK M
Sbjct: 590 AELIKEM 596
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 142/324 (43%), Gaps = 40/324 (12%)
Query: 36 SHSLTDHSVFHRVL-QRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPH 94
SH L +S+F +RS+ S+ A AK++ GY +++L++ Y CH
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSL----ALAVLAKMMKLGYEPDIVTLSSLLNGY--CHSKR 168
Query: 95 IAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFL 154
I+ V +++ +++ G P D T+ TLI G + +
Sbjct: 169 ISDAV-----------ALVDQMVEMG----------YKP--DTFTFTTLIHGLFLHNKAS 205
Query: 155 DGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALV 214
+ + L M+ +PD T+ +VV G + G + A + M R+K N ++ ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 215 DMYAKCGRIDVSKQVFDTVA----RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVL 270
D K ++V+ +F + R +V +N++IN L +G DA + S M + +
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 271 PDSITFVGILKACSHCG-LVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEAC 329
P+ +TF ++ A G LV + H ++Q I P Y +++ L+EA
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS--IDPDTITYNLLINGFCMHNRLDEAK 383
Query: 330 NMIKAMPVE---PDVVIWRALLSA 350
M K M + P++ + L++
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLING 407
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 157/356 (44%), Gaps = 20/356 (5%)
Query: 31 ITQRSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARC 90
I R S+ D S + +S+ + D + H ++ G+ Y + +I+ RC
Sbjct: 61 IQSRPLPSIVDFSKVLSKIAKSK-NYDLVISLFHHMEVCGIGHDLYSYNI--VINCLCRC 117
Query: 91 HQPHIAHHVFSRVMD-TFSKNLVIESLMKAGECDIARKVFDKMPV----------RDVVT 139
+ IA V ++M + ++V S + G C +VFD + + DVV
Sbjct: 118 SRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQ-GNRVFDAIDLVSKMEEMGFRPDVVI 176
Query: 140 WNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLML 199
+NT+I G K D + LF M V D T+ S+V G G +A + M+
Sbjct: 177 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 236
Query: 200 EKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR----DHVSVWNAMINGLAVHGLAL 255
+ + N I A++D++ K G+ + ++++ + R V +N++INGL +HG
Sbjct: 237 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 296
Query: 256 DAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTM 315
+A + M + LPD +T+ ++ V+EG + F M R L+ + Y T+
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT-YNTI 355
Query: 316 VDLLGRAGNLEEACNMIKAMPVEPDVVIWRALLSACRIHGKKELAEFAIANISRLE 371
+ +AG + A + M P++ + LL ++ + E A N+ + E
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSE 411
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVV----TWNTLIGGYVKNVRFLDGLRLF 160
D + N ++ L +G A ++ M +RD+V T+ +I +VK +F + ++L+
Sbjct: 208 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 267
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
M V+PD FT+ S++ G G + AK + LM+ K + + L++ + K
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 327
Query: 221 GRIDVSKQVFDTVAR-----DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSIT 275
R+D ++F +A+ D ++ +N +I G G A +FSRM+ P+ T
Sbjct: 328 KRVDEGTKLFREMAQRGLVGDTIT-YNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRT 383
Query: 276 FVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 335
+ +L V + F MQ + I+ + Y ++ + + GN+E+A ++ +++
Sbjct: 384 YSILLYGLCMNWRVEKALVLFENMQ-KSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 442
Query: 336 P---VEPDVVIWRALLSA-CR 352
++PDVV + ++S CR
Sbjct: 443 SCKGLKPDVVSYTTMISGFCR 463
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 148/313 (47%), Gaps = 20/313 (6%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVK---NVRFLDGL 157
+ F+ N+VI +L K G+ + AR V + M V +VV++NTLI GY K N +
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 281
Query: 158 RLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMY 217
+ + M+ +V P+ TF ++ G + L + V ML++ VK N I +L++
Sbjct: 282 AVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGL 341
Query: 218 AKCGRIDVSKQVFDTV----ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDS 273
G+I + + D + + ++ +NA+ING + + +A+ +F ++ + +P +
Sbjct: 342 CNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTT 401
Query: 274 ITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIK 333
+ ++ A G +++G M+ R I P + Y ++ L R GN+E A +
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEME-REGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460
Query: 334 AMPVE--PDVVIWRALLSA-CRIHGKKELAEFAIANISRLESGDFVLLSNM----YCSLK 386
+ + PD+V + L+ CR G+ A + +S++ L N+ YC
Sbjct: 461 QLTSKGLPDLVTFHILMEGYCR-KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519
Query: 387 NWHNAERVRNMMK 399
N A +R M+
Sbjct: 520 NLKAATNMRTQME 532
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 101/220 (45%), Gaps = 18/220 (8%)
Query: 148 VKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNY 207
+K R D +++ M+ +++P+ FTF V+ + G + A+ V M N
Sbjct: 199 LKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNV 258
Query: 208 ILSAALVDMYAKCG------RID-VSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAV 260
+ L+D Y K G + D V K++ + +++ +N +I+G ++ V
Sbjct: 259 VSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKV 318
Query: 261 FSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL---IQPQLEHYGTMVD 317
F M ++V P+ I++ ++ + G ++E M+++ + +QP L Y +++
Sbjct: 319 FKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS----MRDKMVSAGVQPNLITYNALIN 374
Query: 318 LLGRAGNLEEACNM---IKAMPVEPDVVIWRALLSA-CRI 353
+ L+EA +M +K P ++ L+ A C++
Sbjct: 375 GFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKL 414
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 147/317 (46%), Gaps = 25/317 (7%)
Query: 107 FSKNLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
++ N ++ L+ A D A +VF+ M D+VT+NT+I GY K + + R
Sbjct: 223 YTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRD 282
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
M + E D T+ +++ C + ++ M EK +++ + ++ K G+
Sbjct: 283 METRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGK 342
Query: 223 IDVSKQVFDTVAR----DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVG 278
++ VF+ + R +V+++ +I+G A G DAI + RM E PD +T+
Sbjct: 343 LNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSV 402
Query: 279 ILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE 338
++ G V E ++F+ + L + Y +++D LG+AG ++EA + + M +
Sbjct: 403 VVNGLCKNGRVEEALDYFHTCRFDGLAINSM-FYSSLIDGLGKAGRVDEAERLFEEMSEK 461
Query: 339 P---DVVIWRALLSACRIHGKKELAEFAIANISRLESGD---------FVLLSNMYCSLK 386
D + AL+ A H K + AIA R+E + +LLS M+ +
Sbjct: 462 GCTRDSYCYNALIDAFTKHRK---VDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHR 518
Query: 387 NWHNAERVRNMMKIGGV 403
N A ++ +MM G+
Sbjct: 519 N-EEALKLWDMMIDKGI 534
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 134/317 (42%), Gaps = 64/317 (20%)
Query: 94 HIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVK 149
+ H FS LVI L K G+ + VF+ M + +V + LI GY K
Sbjct: 324 QVPPHAFS---------LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAK 374
Query: 150 NVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA-KWVHGLMLEKRVKLNYI 208
+ D +RL M+ +PD T++ VV G + G + A + H + + +N +
Sbjct: 375 SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG-LAINSM 433
Query: 209 LSAALVDMYAKCGRIDVSKQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRM 264
++L+D K GR+D ++++F+ ++ + +NA+I+ H +AIA+F RM
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 493
Query: 265 EVENVLPDSITFVGILKACSHCGLVNEGREH-----FNIMQNRFL--------------- 304
E E ++ IL + G+ E R +++M ++ +
Sbjct: 494 EEEEGCDQTVYTYTILLS----GMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLC 549
Query: 305 ----------IQPQLEHYGT--------MVDLLGRAGNLEEACNMIKAMPVEPDVVIWR- 345
I +L G M++ L +AG ++EAC + + V R
Sbjct: 550 LSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRI 609
Query: 346 --ALLSACRIHGKKELA 360
+++A R GK +LA
Sbjct: 610 RTVMINALRKVGKADLA 626
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 131/302 (43%), Gaps = 19/302 (6%)
Query: 77 PSLVAALISTYARCHQPHIAHHVF--SRVMDTFSKNL-----VIESLMKAGECDIARKVF 129
P+ V+ ++ + +P IA F SR ++ NL +++ L A + D R V
Sbjct: 116 PNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVS 175
Query: 130 DKMPVRD----VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARL 185
++ + V N LI + K + L ++R M +EP +T+ ++ G
Sbjct: 176 SEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSA 235
Query: 186 GALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVS-KQVFDTVARDHVS---VW 241
+ +A+ V +M R+K + + ++ Y K G+ + +++ D R H + +
Sbjct: 236 MFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITY 295
Query: 242 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 301
MI +A++ M+ + + F ++ G +NEG F M
Sbjct: 296 MTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMI- 354
Query: 302 RFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE---PDVVIWRALLSACRIHGKKE 358
R +P + Y ++D ++G++E+A ++ M E PDVV + +++ +G+ E
Sbjct: 355 RKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVE 414
Query: 359 LA 360
A
Sbjct: 415 EA 416
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 162/377 (42%), Gaps = 31/377 (8%)
Query: 48 VLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR----- 102
V+++++A D +I G A+LI Y R + +
Sbjct: 362 VMEKAKALFDG---------MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN 412
Query: 103 -VMDTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGL 157
V+ ++ V++ + +G+ D A + +M +VV + TLI +++N RF D +
Sbjct: 413 IVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472
Query: 158 RLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMY 217
R+ + M + PD F + S++ G ++ + A+ M+E +K N A + Y
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Query: 218 AKCGRIDVS----KQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDS 273
+ + K++ + + + +IN G ++A + + M + +L D+
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592
Query: 274 ITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIK 333
T+ ++ V++ E F M+ + I P + YG +++ + GN+++A ++
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKG-IAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 334 AMPVE---PDVVIWRALLSA-CR---IHGKKELAEFAIANISRLESGDFVLLSNMYCSLK 386
M E P+V+I+ LL CR I KEL + + + + + YC
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711
Query: 387 NWHNAERVRNMMKIGGV 403
+ A R+ + MK+ G+
Sbjct: 712 DLAEAFRLFDEMKLKGL 728
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 142/319 (44%), Gaps = 32/319 (10%)
Query: 81 AALISTYARCHQPHIAHHVFSR-VMDTFSKNLVIESLM-----KAGECDIARKVFDKMPV 134
LI+ +++ A +F V + + N++I +++ ++GE + A+++ D+M V
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 135 R----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCN 190
+ + VT+ T+I GY K+ + RLF M + PD F + ++V GC RL +
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750
Query: 191 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV--------FDTVARDHVSVWN 242
A + G +K + AL++ K G+ ++ +V FD + + +N
Sbjct: 751 AITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYN 809
Query: 243 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 302
MI+ L G A +F +M+ N++P IT+ +L G E F +
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMG---RRAEMFPVFDEA 866
Query: 303 FL--IQPQLEHYGTMVDLLGRAGNLEEACNMIKAM--------PVEPDVVIWRALLSACR 352
I+P Y +++ + G +A ++ M + + RALLS
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFA 926
Query: 353 IHGKKELAEFAIANISRLE 371
G+ E+AE + N+ RL+
Sbjct: 927 KVGEMEVAEKVMENMVRLQ 945
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 114/280 (40%), Gaps = 44/280 (15%)
Query: 122 CDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTG 181
C R + D+ + D T+ L+ G KN + D +FR M + PD F++ ++ G
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 182 CARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA----RDH 237
++LG + A + M+E+ + N I+ L+ + + G I+ +K++ D ++ +
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 238 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 297
+ +I+G G +A +F M+++ ++PDS + ++ C V F
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG 756
Query: 298 -----------------------------------IMQNRF--LIQPQLEHYGTMVDLLG 320
+M F +P Y M+D L
Sbjct: 757 TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLC 816
Query: 321 RAGNLEEACNMIKAMP---VEPDVVIWRALLSACRIHGKK 357
+ GNLE A + M + P V+ + +LL+ G++
Sbjct: 817 KEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 126/288 (43%), Gaps = 19/288 (6%)
Query: 81 AALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIAR----KVFD 130
A LI Y + + IA + ++ D + ++I L+ +G D A K+ D
Sbjct: 384 APLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLID 443
Query: 131 KMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCN 190
+ D +N L+ G K RFL LF ML + PD + +A+++ G R G
Sbjct: 444 RGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDE 503
Query: 191 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVS----VWNAMIN 246
A+ V L +EK VK++ + A++ + + G +D + + + +H+ ++ +I+
Sbjct: 504 ARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID 563
Query: 247 GLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQ 306
G AI +F ME P+ +T+ ++ G E F MQ R L+
Sbjct: 564 GYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLV- 622
Query: 307 PQLEHYGTMVDLLGR-AGNLEEACNMIKAMPVE---PDVVIWRALLSA 350
P + Y T++ L + + LE+A + M P+ V + LL
Sbjct: 623 PNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQG 670
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 121/296 (40%), Gaps = 55/296 (18%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVRDVV----TWNTLIGGYVKNVRFLDGLRLF 160
D + N++I L K G+ ++A D+ + ++ ++ LI Y K+ + +L
Sbjct: 344 DVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLL 403
Query: 161 -----RG------------------------------MLSAEVEPDGFTFASVVTGCARL 185
RG ++ V PD + +++G +
Sbjct: 404 LQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT 463
Query: 186 GALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV----W 241
G AK + ML++ + + + A L+D + + G D +++VF V V
Sbjct: 464 GRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHH 523
Query: 242 NAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQN 301
NAMI G G+ +A+A +RM E+++PD T+ I+ G V + I
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID-----GYVKQQDMATAIKIF 578
Query: 302 RFL----IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE---PDVVIWRALLSA 350
R++ +P + Y ++++ G+ + A K M + P+VV + L+ +
Sbjct: 579 RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRS 634
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 147/343 (42%), Gaps = 72/343 (20%)
Query: 64 THAKL--IVHGYATYPSLVAAL-ISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAG 120
TH L ++H YA SL A+ I Y ++ V D + N ++ L+K+
Sbjct: 133 THEALSHVLHAYAESGSLSKAVEIYDYVV--------ELYDSVPDVIACNSLLSLLVKSR 184
Query: 121 ECDIARKVFDKMPVR---------------------------------------DVVTWN 141
ARKV+D+M R ++V +N
Sbjct: 185 RLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYN 244
Query: 142 TLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEK 201
T+IGGY K + +F+ + P TF +++ G + G + + + E+
Sbjct: 245 TIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKER 304
Query: 202 RVKLNYILSAALVDMYAKCG-RIDVSKQVFDTVARD---HVSVWNAMINGLAVHGLALDA 257
++++ ++D + G ++D ++ + +A D V+ +N +IN L G A
Sbjct: 305 GLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVA 364
Query: 258 IAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQ-------PQLE 310
+ + ++P+++++ +++A +C + +E+ + ++ L+Q P +
Sbjct: 365 VGFLDEASKKGLIPNNLSYAPLIQA--YC----KSKEY--DIASKLLLQMAERGCKPDIV 416
Query: 311 HYGTMVDLLGRAGNLEEACNM-IKAMP--VEPDVVIWRALLSA 350
YG ++ L +G++++A NM +K + V PD I+ L+S
Sbjct: 417 TYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSG 459
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 133/283 (46%), Gaps = 28/283 (9%)
Query: 92 QPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRD-----VVTWNTLIGG 146
QP H D + ++ +L +A + K+ D+M VRD VT+N LI
Sbjct: 352 QPGFKH-------DGHTYTTMVGNLGRAKQFGEINKLLDEM-VRDGCKPNTVTYNRLIHS 403
Query: 147 YVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLN 206
Y + + + +F M A EPD T+ +++ A+ G L A ++ M E + +
Sbjct: 404 YGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPD 463
Query: 207 YILSAALVDMYAKCGRIDVSKQVF-DTVAR---DHVSVWNAMINGLAVHGLALD---AIA 259
+ +++ K G + + ++F + V + ++ +N MI A+H A + A+
Sbjct: 464 TFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI---ALHAKARNYETALK 520
Query: 260 VFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLL 319
++ M+ PD +T+ +++ HCG + E F MQ + + P YG +VDL
Sbjct: 521 LYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV-PDEPVYGLLVDLW 579
Query: 320 GRAGNLEEACNMIKAM---PVEPDVVIWRALLSA-CRIHGKKE 358
G+AGN+++A +AM + P+V +LLS R+H E
Sbjct: 580 GKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSE 622
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 109/231 (47%), Gaps = 22/231 (9%)
Query: 83 LISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKVFDKMP--- 133
LI +A+ IA ++ R+ DTF+ +++I L KAG A ++F +M
Sbjct: 435 LIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQG 494
Query: 134 -VRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 192
++VT+N +I + K + L+L+R M +A +PD T++ V+ G L A+
Sbjct: 495 CTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAE 554
Query: 193 WVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV----ARDHVSVWNAMING- 247
V M K + + LVD++ K G +D + Q + + R +V N++++
Sbjct: 555 GVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTF 614
Query: 248 LAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNI 298
L VH ++ +A + M + P T+ +L C+ + R +F++
Sbjct: 615 LRVHRMS-EAYNLLQSMLALGLHPSLQTYTLLLSCCT------DARSNFDM 658
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 124/298 (41%), Gaps = 35/298 (11%)
Query: 61 AAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR-VMDTFSKNLVIESLMKA 119
AA+ ++ G++ AL+ Y + H+P A V + V++ FS +
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPS--------- 348
Query: 120 GECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVV 179
+VT+N+LI Y ++ + + L M +PD FT+ +++
Sbjct: 349 -----------------IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 180 TGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA----R 235
+G R G + +A + M K N A + MY G+ ++FD +
Sbjct: 392 SGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 451
Query: 236 DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREH 295
+ WN ++ +G+ + VF M+ +P+ TF ++ A S CG +
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 511
Query: 296 FNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSA 350
+ M + + P L Y T++ L R G E++ ++ M +P+ + + +LL A
Sbjct: 512 YRRMLDAG-VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 167/410 (40%), Gaps = 57/410 (13%)
Query: 29 WSITQRSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYA----TYPSLVAAL- 83
W + Q+ S+ D+SV ++ ++AA L G++ +Y SL++A
Sbjct: 160 WFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFA 219
Query: 84 --------ISTYAR-----CHQPHIAHHVFSRVM------------------------DT 106
++ + + C I ++V V D
Sbjct: 220 NSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDA 279
Query: 107 FSKNLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLFRG 162
++ N +I + A +VF++M D VT+N L+ Y K+ R + +++
Sbjct: 280 YTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNE 339
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
M+ P T+ S+++ AR G L A + M EK K + L+ + + G+
Sbjct: 340 MVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK 399
Query: 223 IDVSKQVFDTV----ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVG 278
++ + +F+ + + ++ +NA I G + + +F + V + PD +T+
Sbjct: 400 VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNT 459
Query: 279 ILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM--- 335
+L G+ +E F M+ + P+ E + T++ R G+ E+A + + M
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFEQAMTVYRRMLDA 518
Query: 336 PVEPDVVIWRALLSACRIHGKKELAEFAIANISRLESGDFVLLSNMYCSL 385
V PD+ + +L+A G E +E +A +E G YCSL
Sbjct: 519 GVTPDLSTYNTVLAALARGGMWEQSEKVLA---EMEDGRCKPNELTYCSL 565
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 11/229 (4%)
Query: 132 MPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNA 191
+P R+ T+NTLI Y + F + ++R ML A V PD T+ +V+ AR G +
Sbjct: 486 VPERE--TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS 543
Query: 192 KWVHGLMLEKRVKLNYILSAALVDMYAKCGRI----DVSKQVFDTVARDHVSVWNAMING 247
+ V M + R K N + +L+ YA I ++++V+ V + ++
Sbjct: 544 EKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLV 603
Query: 248 LAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQP 307
+ L +A FS ++ PD T ++ +V + + M+ R P
Sbjct: 604 CSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT-P 662
Query: 308 QLEHYGTMVDLLGRA---GNLEEACNMIKAMPVEPDVVIWRALLSA-CR 352
+ Y +++ + R+ G EE I A ++PD++ + ++ A CR
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCR 711
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 21/270 (7%)
Query: 92 QPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRD-----VVTWNTLIGG 146
QP H D + ++ +L +A + K+ D+M VRD VT+N LI
Sbjct: 357 QPGFKH-------DGHTYTTMVGNLGRAKQFGAINKLLDEM-VRDGCQPNTVTYNRLIHS 408
Query: 147 YVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLN 206
Y + + + +F M A +PD T+ +++ A+ G L A ++ M + +
Sbjct: 409 YGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 468
Query: 207 YILSAALVDMYAKCGRIDVSKQVF----DTVARDHVSVWNAMINGLAVHGLALDAIAVFS 262
+ +++ K G + + ++F D ++ +N M++ A +A+ ++
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Query: 263 RMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRA 322
M+ PD +T+ +++ HCG + E F MQ + I P YG +VDL G+A
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKA 587
Query: 323 GNLEEACNMIKAM---PVEPDVVIWRALLS 349
GN+E+A +AM + P+V +LLS
Sbjct: 588 GNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 83 LISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKVF----DKM 132
LI +A+ IA ++ R+ DTF+ +++I L KAG A K+F D+
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 133 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 192
++VT+N ++ + K + + L+L+R M +A EPD T++ V+ G L A+
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 193 WVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV----ARDHVSVWNAMING- 247
V M +K + + LVD++ K G ++ + Q + + R +V N++++
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
Query: 248 LAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
L V+ +A +A + M + P T+ +L C+
Sbjct: 620 LRVNKIA-EAYELLQNMLALGLRPSLQTYTLLLSCCT 655
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 21/270 (7%)
Query: 92 QPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRD-----VVTWNTLIGG 146
QP H D + ++ +L +A + K+ D+M VRD VT+N LI
Sbjct: 357 QPGFKH-------DGHTYTTMVGNLGRAKQFGAINKLLDEM-VRDGCQPNTVTYNRLIHS 408
Query: 147 YVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLN 206
Y + + + +F M A +PD T+ +++ A+ G L A ++ M + +
Sbjct: 409 YGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 468
Query: 207 YILSAALVDMYAKCGRIDVSKQVF----DTVARDHVSVWNAMINGLAVHGLALDAIAVFS 262
+ +++ K G + + ++F D ++ +N M++ A +A+ ++
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Query: 263 RMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRA 322
M+ PD +T+ +++ HCG + E F MQ + I P YG +VDL G+A
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKA 587
Query: 323 GNLEEACNMIKAM---PVEPDVVIWRALLS 349
GN+E+A +AM + P+V +LLS
Sbjct: 588 GNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 83 LISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKVF----DKM 132
LI +A+ IA ++ R+ DTF+ +++I L KAG A K+F D+
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 133 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 192
++VT+N ++ + K + + L+L+R M +A EPD T++ V+ G L A+
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 193 WVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV----ARDHVSVWNAMING- 247
V M +K + + LVD++ K G ++ + Q + + R +V N++++
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
Query: 248 LAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
L V+ +A +A + M + P T+ +L C+
Sbjct: 620 LRVNKIA-EAYELLQNMLALGLRPSLQTYTLLLSCCT 655
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 21/270 (7%)
Query: 92 QPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRD-----VVTWNTLIGG 146
QP H D + ++ +L +A + K+ D+M VRD VT+N LI
Sbjct: 357 QPGFKH-------DGHTYTTMVGNLGRAKQFGAINKLLDEM-VRDGCQPNTVTYNRLIHS 408
Query: 147 YVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLN 206
Y + + + +F M A +PD T+ +++ A+ G L A ++ M + +
Sbjct: 409 YGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 468
Query: 207 YILSAALVDMYAKCGRIDVSKQVF----DTVARDHVSVWNAMINGLAVHGLALDAIAVFS 262
+ +++ K G + + ++F D ++ +N M++ A +A+ ++
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Query: 263 RMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRA 322
M+ PD +T+ +++ HCG + E F MQ + I P YG +VDL G+A
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKA 587
Query: 323 GNLEEACNMIKAM---PVEPDVVIWRALLS 349
GN+E+A +AM + P+V +LLS
Sbjct: 588 GNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 83 LISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKVF----DKM 132
LI +A+ IA ++ R+ DTF+ +++I L KAG A K+F D+
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 133 PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAK 192
++VT+N ++ + K + + L+L+R M +A EPD T++ V+ G L A+
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 193 WVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV----ARDHVSVWNAMING- 247
V M +K + + LVD++ K G ++ + Q + + R +V N++++
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
Query: 248 LAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACS 284
L V+ +A +A + M + P T+ +L C+
Sbjct: 620 LRVNKIA-EAYELLQNMLALGLRPSLQTYTLLLSCCT 655
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 141/337 (41%), Gaps = 50/337 (14%)
Query: 61 AAKTHAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMD------TFSKNLVIE 114
A + H + G+A P LI Y + A V +++ T + N+ I
Sbjct: 292 ARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYIC 351
Query: 115 SLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFT 174
+L G D AR++ M DVV++NTL+ GY+K +F++ LF + + ++ P T
Sbjct: 352 ALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 411
Query: 175 FASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDT-- 232
+ +++ G G L A+ + M + + + I LV + K G + ++ +V+D
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Query: 233 ----------------------------------VARDH----VSVWNAMINGLAVHGLA 254
VA DH ++++N I+GL G
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 531
Query: 255 LDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGT 314
+ AI ++ ++PD +T+ +++ G R ++ M + L P + Y
Sbjct: 532 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLY-PSVITYFV 590
Query: 315 MVDLLGRAGNLEEACNM---IKAMPVEPDVVIWRALL 348
++ +AG LE+A +K V P+V+ ALL
Sbjct: 591 LIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALL 627
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 80/178 (44%), Gaps = 10/178 (5%)
Query: 117 MKAGECDIARKVFDKMPVRD-----VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPD 171
++ G+ D A ++ ++M D + +N I G K + + R + + PD
Sbjct: 490 LRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPD 549
Query: 172 GFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFD 231
T+ +V+ G G A+ ++ ML KR+ + I L+ +AK GR++ + Q
Sbjct: 550 HVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYST 609
Query: 232 TV----ARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGIL-KACS 284
+ R +V NA++ G+ G +A +ME E + P+ ++ ++ K C
Sbjct: 610 EMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCD 667
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Query: 89 RCHQPHIA--HHVFSRVMDTFSKNLVIESLMKAGEC----DIARKVFDKMPVRDVVTWNT 142
R H+ +A HH D N+ I+ L K G + RK+F V D VT+ T
Sbjct: 500 RLHEEMVATDHHA----PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTT 555
Query: 143 LIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKR 202
+I GY++N +F L+ ML + P T+ ++ G A+ G L A M ++
Sbjct: 556 VIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRG 615
Query: 203 VKLNYILSAALVDMYAKCGRID 224
V+ N + AL+ K G ID
Sbjct: 616 VRPNVMTHNALLYGMCKAGNID 637
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 47/262 (17%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 165
N +I+ L K GE +IA ++ ++M + DVVT+NTL+ G + R+ D R+ R M+
Sbjct: 180 NTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK 239
Query: 166 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 225
+ PD TF AL+D++ K G +D
Sbjct: 240 RSINPDVVTF-----------------------------------TALIDVFVKQGNLDE 264
Query: 226 SKQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
+++++ + + V +N++INGL +HG DA F M + P+ +T+ ++
Sbjct: 265 AQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLIS 324
Query: 282 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVE 338
+V+EG + F M + Y T++ + G L A ++ M V
Sbjct: 325 GFCKFRMVDEGMKLFQRMSCEGF-NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVT 383
Query: 339 PDVVIWRALLSACRIHGKKELA 360
PD++ LL ++G+ E A
Sbjct: 384 PDIITHCILLHGLCVNGEIESA 405
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 17/226 (7%)
Query: 77 PSLVA--ALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKV 128
P +V ALI + + A ++ ++ + + N +I L G A+K
Sbjct: 244 PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKT 303
Query: 129 FDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
FD M + +VVT+NTLI G+ K +G++LF+ M D FT+ +++ G +
Sbjct: 304 FDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQ 363
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARDH----VSV 240
+G L A + M+ +RV + I L+ G I+ + FD + +
Sbjct: 364 VGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVA 423
Query: 241 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF-VGILKACSH 285
+N MI+GL A +F R+ VE V PD+ T+ + IL C +
Sbjct: 424 YNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 99/222 (44%), Gaps = 8/222 (3%)
Query: 136 DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVH 195
D+ ++ LI + + R L + M+ EP TF S++ G + + +A +
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 196 GLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD----HVSVWNAMINGLAVH 251
LM++ + N ++ L+D K G ++++ ++ + + + V +N ++ GL
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 252 GLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEH 311
G DA + M ++ PD +TF ++ G ++E +E + M + P
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS-SVDPNNVT 283
Query: 312 YGTMVDLLGRAGNLEEACNMIKAMPVE---PDVVIWRALLSA 350
Y ++++ L G L +A M + P+VV + L+S
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 129/287 (44%), Gaps = 18/287 (6%)
Query: 79 LVAALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKVFDKM 132
+ ++I R + A FS ++ DT +I+ K G+ A K F +M
Sbjct: 318 IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 377
Query: 133 PVRD----VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGAL 188
RD V+T+ +I G+ + ++ +LF M +EPD TF ++ G + G +
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 189 CNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV----ARDHVSVWNAM 244
+A VH M++ N + L+D K G +D + ++ + + ++ +N++
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 245 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 304
+NGL G +A+ + E + D++T+ ++ A G +++ +E M + L
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 305 IQPQLEHYGTMVDLLGRAGNLEEA---CNMIKAMPVEPDVVIWRALL 348
QP + + +++ G LE+ N + A + P+ + +L+
Sbjct: 558 -QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 121/281 (43%), Gaps = 11/281 (3%)
Query: 65 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGEC 122
H++ I TY ++++ + H +F + + D+ + +I KAG
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 123 DIARKVFDKM----PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 178
A +V + M +VVT+ TLI G K L M ++P+ FT+ S+
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 179 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA---- 234
V G + G + A + G + + + L+D Y K G +D ++++ +
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 235 RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE 294
+ + +N ++NG +HG+ D + + M + + P++ TF ++K +
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 295 HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 335
+ M +R + P + Y +V +A N++EA + + M
Sbjct: 618 IYKDMCSRG-VGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 88/189 (46%), Gaps = 10/189 (5%)
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
PD ++++VV G R G L + +M K +K N + +++ + + ++ +++
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 230 FDTVARDHV----SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 285
F + R + V+ +I+G G A F M ++ PD +T+ I+
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 286 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEAC----NMIKAMPVEPDV 341
G + E + F+ M + L +P + +++ +AG++++A +MI+A P+V
Sbjct: 399 IGDMVEAGKLFHEMFCKGL-EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNV 456
Query: 342 VIWRALLSA 350
V + L+
Sbjct: 457 VTYTTLIDG 465
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 129/287 (44%), Gaps = 18/287 (6%)
Query: 79 LVAALISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKVFDKM 132
+ ++I R + A FS ++ DT +I+ K G+ A K F +M
Sbjct: 318 IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 377
Query: 133 PVRD----VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGAL 188
RD V+T+ +I G+ + ++ +LF M +EPD TF ++ G + G +
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 189 CNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV----ARDHVSVWNAM 244
+A VH M++ N + L+D K G +D + ++ + + ++ +N++
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 245 INGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFL 304
+NGL G +A+ + E + D++T+ ++ A G +++ +E M + L
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 305 IQPQLEHYGTMVDLLGRAGNLEEA---CNMIKAMPVEPDVVIWRALL 348
QP + + +++ G LE+ N + A + P+ + +L+
Sbjct: 558 -QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 121/281 (43%), Gaps = 11/281 (3%)
Query: 65 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGEC 122
H++ I TY ++++ + H +F + + D+ + +I KAG
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 123 DIARKVFDKM----PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 178
A +V + M +VVT+ TLI G K L M ++P+ FT+ S+
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 179 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA---- 234
V G + G + A + G + + + L+D Y K G +D ++++ +
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 235 RDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE 294
+ + +N ++NG +HG+ D + + M + + P++ TF ++K +
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 295 HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 335
+ M +R + P + Y +V +A N++EA + + M
Sbjct: 618 IYKDMCSRG-VGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 88/189 (46%), Gaps = 10/189 (5%)
Query: 170 PDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQV 229
PD ++++VV G R G L + +M K +K N + +++ + + ++ +++
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 230 FDTVARDHV----SVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSH 285
F + R + V+ +I+G G A F M ++ PD +T+ I+
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 286 CGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEAC----NMIKAMPVEPDV 341
G + E + F+ M + L +P + +++ +AG++++A +MI+A P+V
Sbjct: 399 IGDMVEAGKLFHEMFCKGL-EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNV 456
Query: 342 VIWRALLSA 350
V + L+
Sbjct: 457 VTYTTLIDG 465
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 127/267 (47%), Gaps = 12/267 (4%)
Query: 105 DTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLF 160
D F+ + +I+SL + G D A +F +M + VVT+N+L+ G K ++ DG L
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 161 RGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKC 220
+ M+S E+ P+ TF ++ + G L A ++ M+ + + N I L+D Y
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346
Query: 221 GRIDVSKQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITF 276
R+ + + D + R+ S + ++I G + D + VF + ++ +++T+
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 406
Query: 277 VGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM- 335
+++ G + E F M + ++ P + YG ++D L G LE+A + + +
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVL-PDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Query: 336 --PVEPDVVIWRALLSACRIHGKKELA 360
++ +V++ ++ GK E A
Sbjct: 466 KSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 158/382 (41%), Gaps = 56/382 (14%)
Query: 31 ITQRSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYPSLVAALISTYARC 90
I R SL D S F + R++ K +L ++G A + +I+ + RC
Sbjct: 80 IRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK---QLELNGIAHNIYTLNIMINCFCRC 136
Query: 91 HQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKVFDKMPVR----DVVTW 140
+ A+ V +VM DT + N +I+ L G+ A + D+M DVVT+
Sbjct: 137 CKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTY 196
Query: 141 NTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLG-------------- 186
N+++ G ++ L L R M V+ D FT+++++ R G
Sbjct: 197 NSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET 256
Query: 187 ---------------ALCNA-KWVHGLMLEK-----RVKLNYILSAALVDMYAKCGRIDV 225
LC A KW G +L K + N I L+D++ K G++
Sbjct: 257 KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316
Query: 226 SKQVFDTVARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
+ +++ + +S +N +++G + +A + M PD +TF ++K
Sbjct: 317 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376
Query: 282 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVE 338
V++G + F + R L+ + Y +V ++G ++ A + + M V
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLVANAV-TYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 339 PDVVIWRALLSACRIHGKKELA 360
PDV+ + LL +GK E A
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKA 457
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 133/299 (44%), Gaps = 14/299 (4%)
Query: 65 HAKLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAGEC 122
K I TY SLV L + + SR V + + N++++ +K G+
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
Query: 123 DIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASV 178
A +++ +M R +++T+NTL+ GY R + + M+ + PD TF S+
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 179 VTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR--- 235
+ G + + + V + ++ + N + + LV + + G+I +++++F +
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 236 -DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGRE 294
V + +++GL +G A+ +F ++ + + + I++ G V +
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 295 HFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE---PDVVIWRALLSA 350
F + + ++P + Y M+ L + G+L EA +++ M + P+ + L+ A
Sbjct: 495 LFCSLPCKG-VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 138/313 (44%), Gaps = 42/313 (13%)
Query: 75 TYPSLVAALISTYARCHQPHIAHHV-FSRVM-------DTFSKNLVIESLMKAGECDIAR 126
T+ +LV L C H+ H + VM D ++ N VI L K GE A
Sbjct: 297 TFNTLVNGL------CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 127 KVFDKMPVRD----VVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
+V D+M RD VT+NTLI K + + L R + S + PD TF S++ G
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG- 409
Query: 183 ARLGALC---NAKWVHGLMLEKRVK---LNYILSAALVDMYAKCGRIDVS----KQVFDT 232
LC N + L E R K + L+D G++D + KQ+ +
Sbjct: 410 -----LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 233 VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEG 292
V +N +I+G +A +F MEV V +S+T+ ++ V +
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 293 REHFN--IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRAL 347
+ + IM+ + +P Y +++ R G++++A ++++AM EPD+V + L
Sbjct: 525 AQLMDQMIMEGQ---KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581
Query: 348 LSACRIHGKKELA 360
+S G+ E+A
Sbjct: 582 ISGLCKAGRVEVA 594
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 148/344 (43%), Gaps = 20/344 (5%)
Query: 10 IKLQRLIHGAIKFGSLSESWSITQRSSHS---LTDHSVFHRVLQRSRASMDSTTAAKTHA 66
+ + ++HG K G + ++ + Q S+ D F+ ++ + A +
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 67 KLIVHGYA----TYPSLVAALISTYARCHQPHIAHHVFSR--VMDTFSKNLVIESLMKAG 120
++ GY TY S+++ L + + +R +T + N +I +L K
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 121 E----CDIARKVFDKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFA 176
+ ++AR + K + DV T+N+LI G + LF M S EPD FT+
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 439
Query: 177 SVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDT---- 232
++ G L A + M + I L+D + K + ++++FD
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH 499
Query: 233 -VARDHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNE 291
V+R+ V+ +N +I+GL DA + +M +E PD T+ +L G + +
Sbjct: 500 GVSRNSVT-YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKK 558
Query: 292 GREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 335
+ M + +P + YGT++ L +AG +E A +++++
Sbjct: 559 AADIVQAMTSNG-CEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 143/335 (42%), Gaps = 61/335 (18%)
Query: 15 LIHGAIKFGSLSESWSITQR------SSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKL 68
+I G K G + E+ + + S +++T +++ + + ++ + A +K
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 69 IVHGYATYPSLVAALISTYARCHQPHIAHHVFSRV------MDTFSKNLVIESLMKAGEC 122
I+ T+ SL+ L T R H+ +A +F + D F+ N++I+SL G+
Sbjct: 396 ILPDVCTFNSLIQGLCLT--RNHR--VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 123 DIA-----------------------------------RKVFDKMPV----RDVVTWNTL 143
D A ++FD+M V R+ VT+NTL
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 144 IGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRV 203
I G K+ R D +L M+ +PD +T+ S++T R G + A + M
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 204 KLNYILSAALVDMYAKCGRIDVSKQVFDTVARDHVSV----WNAMINGLAVHGLALDAIA 259
+ + + L+ K GR++V+ ++ ++ +++ +N +I GL +AI
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAIN 631
Query: 260 VFSRM-EVENVLPDSITFVGILKA-CSHCGLVNEG 292
+F M E PD++++ + + C+ G + E
Sbjct: 632 LFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREA 666
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 131/332 (39%), Gaps = 35/332 (10%)
Query: 36 SHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKLIVHGYATYP------SLVAALISTYAR 89
S S D ++ SR M ++T +++ YA + S+V +I +
Sbjct: 96 SGSFDDMKKILEDMKSSRCEMGTSTFL-----ILIESYAQFELQDEILSVVDWMIDEFGL 150
Query: 90 CHQPHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPVRDVVTWNTLIGGYVK 149
H + + + ++D S LV S K V+ P DV T+N LI +
Sbjct: 151 KPDTHFYNRMLNLLVDGNSLKLVEISHAKMS-------VWGIKP--DVSTFNVLIKALCR 201
Query: 150 NVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYIL 209
+ + + M S + PD TF +V+ G G L A + M+E + +
Sbjct: 202 AHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVS 261
Query: 210 SAALVDMYAKCGRI--------DVSKQVFDTVARDHVSVWNAMINGLAVHGLALDAIAVF 261
+V + K GR+ ++S Q D D + +N ++NGL G AI +
Sbjct: 262 VNVIVHGFCKEGRVEDALNFIQEMSNQ--DGFFPDQYT-FNTLVNGLCKAGHVKHAIEIM 318
Query: 262 SRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGR 321
M E PD T+ ++ G V E E + M R P Y T++ L +
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD-CSPNTVTYNTLISTLCK 377
Query: 322 AGNLEEACNMIKAMP---VEPDVVIWRALLSA 350
+EEA + + + + PDV + +L+
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 122/317 (38%), Gaps = 54/317 (17%)
Query: 108 SKNLVIESLMKAGECDIARKVFDKMPVRD-----VVTWNTLIGGYVKNVRFLDGLRLFRG 162
S N+++ K G + A +M +D T+NTL+ G K + +
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 163 MLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGR 222
ML +PD +T+ SV++G +LG + A V M+ + N + L+ K +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 223 IDVSKQVFDTVAR----DHVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVG 278
++ + ++ + V +N++I GL + A+ +F M + PD T
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT--- 437
Query: 279 ILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE 338
Y ++D L G L+EA NM+K M +
Sbjct: 438 ---------------------------------YNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 339 P---DVVIWRALLSA-CRIHGKKE----LAEFAIANISRLESGDFVLLSNMYCSLKNWHN 390
V+ + L+ C+ + +E E + +SR S + L + C + +
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSR-NSVTYNTLIDGLCKSRRVED 523
Query: 391 AERVRNMMKIGGVRKKR 407
A ++ + M + G + +
Sbjct: 524 AAQLMDQMIMEGQKPDK 540
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 137/308 (44%), Gaps = 22/308 (7%)
Query: 83 LISTYARCHQPHIAHHVFSRVM------DTFSKNLVIESLMKAGECDIARKVFDKM---- 132
+I+ + C Q +A + +++ D + ++ + A + DKM
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 133 --PVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCN 190
P D+V +N +I K R D F+ + + P+ T+ ++V G +
Sbjct: 186 YKP--DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 191 AKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR----DHVSVWNAMIN 246
A + M++K++ N I +AL+D + K G++ +K++F+ + R + ++++IN
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 247 GLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQ 306
GL +H +A +F M + L D +++ ++ V +G + F M R L+
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 307 PQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALLSACRIHGKKELAEFA 363
+ Y T++ +AG++++A M + PD+ + LL +G+ E A
Sbjct: 364 NTV-TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 364 IANISRLE 371
++ + E
Sbjct: 423 FEDMQKRE 430
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 12/252 (4%)
Query: 110 NLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYVKNVRFLDGLRLFRGMLS 165
N ++ +++K + D+ + KM V D+ T+N +I + + L + ML
Sbjct: 89 NRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLK 148
Query: 166 AEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDV 225
EPD T S+V G R + +A + M+E K + + A++D K R++
Sbjct: 149 LGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVND 208
Query: 226 SKQVFDTVARD----HVSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILK 281
+ F + R +V + A++NGL DA + S M + + P+ IT+ +L
Sbjct: 209 AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 268
Query: 282 ACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAMPVE--- 338
A G V E +E F M R I P + Y ++++ L ++EA M M +
Sbjct: 269 AFVKNGKVLEAKELFEEMV-RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 339 PDVVIWRALLSA 350
DVV + L++
Sbjct: 328 ADVVSYNTLING 339
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 113/257 (43%), Gaps = 24/257 (9%)
Query: 67 KLIVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLMKAGEC---- 122
K I TY +L+ A + + + +D ++V S + G C
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP---DIVTYSSLINGLCLHDR 310
Query: 123 -DIARKVFDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFAS 177
D A ++FD M + DVV++NTLI G+ K R DG++LFR M + + T+ +
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 178 VVTGCARLGALCNAKWVHGLM----LEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV 233
++ G + G + A+ M + + IL L D G ++ + +F+ +
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN----GELEKALVIFEDM 426
Query: 234 ARDHVSV----WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 289
+ + + + +I G+ G +A ++F + ++ + PD +T+ ++ GL+
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 486
Query: 290 NEGREHFNIMQNRFLIQ 306
+E + M+ L++
Sbjct: 487 HEVEALYTKMKQEGLMK 503
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 120/250 (48%), Gaps = 24/250 (9%)
Query: 67 KLIVHGYATYPSLVAAL---------ISTYARCHQPHIAHHVFSRVMDTFSKNLVIESLM 117
+++ G+ Y +++ L ++ ++ + HI HV N +I+ L
Sbjct: 35 RMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIY-------NAIIDRLC 87
Query: 118 KAGECDIARKVF----DKMPVRDVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGF 173
K G A+ +F DK DV+T++ +I + ++ R+ D +L R M+ ++ PD
Sbjct: 88 KDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVV 147
Query: 174 TFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV 233
TF++++ + G + A+ ++G ML + + I +++D + K R++ +K++ D++
Sbjct: 148 TFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSM 207
Query: 234 ARDHVS----VWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLV 289
A S ++ +ING + + +F M ++ +++T+ ++ G +
Sbjct: 208 ASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL 267
Query: 290 NEGREHFNIM 299
+ ++ N+M
Sbjct: 268 DAAQDLLNVM 277
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/231 (18%), Positives = 97/231 (41%), Gaps = 12/231 (5%)
Query: 15 LIHGAIKFGSLSESWSI------TQRSSHSLTDHSVFHRVLQRSRASMDSTTAAKTHAKL 68
+I+G K G + ++ T +H + +++ R+ + + H K
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 69 IVHGYATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGECDIAR 126
I TY ++ + + + + R + D + + +I +L+K G+ A
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAE 166
Query: 127 KVFDKMPVRDV----VTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGC 182
+++ M R + +T+N++I G+ K R D R+ M S PD TF++++ G
Sbjct: 167 EIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGY 226
Query: 183 ARLGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTV 233
+ + N + M + + N + L+ + + G +D ++ + + +
Sbjct: 227 CKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVM 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 75 TYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGECDIARKVFDKM 132
T+ +L+ AL+ I + R + T + N +I+ K + A+++ D M
Sbjct: 148 TFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSM 207
Query: 133 PVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGAL 188
+ DVVT++TLI GY K R +G+ +F M + + T+ +++ G ++G L
Sbjct: 208 ASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL 267
Query: 189 CNAKWVHGLMLEKRVKLNYI 208
A+ + +M+ V NYI
Sbjct: 268 DAAQDLLNVMISSGVAPNYI 287
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 131/299 (43%), Gaps = 19/299 (6%)
Query: 77 PSLVAALISTYARCHQPHIAHHVFSRV------MDTFSKNLVIESLMKAGECDIARKVFD 130
P A + YA +P A +F + D S N +++ L K+ + A ++F
Sbjct: 126 PKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR 185
Query: 131 KMPVR---DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGA 187
+ R D VT+N ++ G+ R L + + M+ + P+ T+ +++ G R G
Sbjct: 186 ALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ 245
Query: 188 LCNAKWVHGLMLEKR-VKLNYILSAALVDMYAKCGRIDVSKQVFDTVARD----HVSVWN 242
+ +A W L ++KR +++ + +V + G I ++ VFD + R+ V+ +N
Sbjct: 246 IRHA-WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYN 304
Query: 243 AMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNR 302
AMI L +A+ +F M P+ T+ +++ H G + G E M+N
Sbjct: 305 AMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENE 364
Query: 303 FLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM---PVEPDVVIWRALLSACRIHGKKE 358
+P + Y M+ +E+A + + M P++ + L+S + + E
Sbjct: 365 G-CEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSE 422
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 142/327 (43%), Gaps = 29/327 (8%)
Query: 93 PHIAHHVFSRVMDTFSKNLVIESLMKAGECDIARKVFDKMPV----RDVVTWNTLIGGYV 148
P IA FSR++ SK MK + D+ ++++M + ++ T N L+ +
Sbjct: 79 PSIAD--FSRLLSAISK-------MK--KYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127
Query: 149 KNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGALCNAKWVHGLMLEKRVKLNYI 208
+ + L M+ EP TF S++ G R + +A ++ M+ K N +
Sbjct: 128 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVV 187
Query: 209 LSAALVDMYAKCGRIDVSKQVFDTVARD----HVSVWNAMINGLAVHGLALDAIAVFSRM 264
+ ++D K ++D + + + + +D V +N++I+GL G DA + S M
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM 247
Query: 265 EVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQNRFLIQPQLEHYGTMVDLLGRAGN 324
+ PD TF ++ AC G V+E E + M R L P + Y ++ L
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL-DPDIVTYSLLIYGLCMYSR 306
Query: 325 LEEACNMIKAMPVE---PDVVIWRALLSA-CRI----HGKKELAEFAIANISRLESGDFV 376
L+EA M M + PDVV + L++ C+ HG K E + + R + +
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR-NTVTYT 365
Query: 377 LLSNMYCSLKNWHNAERVRNMMKIGGV 403
+L YC + AE + M GV
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGV 392
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 137/292 (46%), Gaps = 22/292 (7%)
Query: 77 PSLV--AALISTYARCHQPHIAHHVFSRVMDTFSK------NLVIESLMKAGECDIARKV 128
PS+V +L++ + R + + A ++F +++ K N +I+ L K+ + D A +
Sbjct: 149 PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 129 FDKMPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCAR 184
++M DVVT+N+LI G + R+ D R+ M E+ PD FTF +++ C +
Sbjct: 209 LNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 185 LGALCNAKWVHGLMLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVAR----DHVSV 240
G + A+ + M+ + + + + + L+ R+D ++++F + V
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVT 328
Query: 241 WNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFNIMQ 300
++ +ING + +F M V+ +++T+ +++ G +N E F M
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Query: 301 NRFL-IQPQLEHYGTMVDLLGRAGNLEEACNMIKAMP---VEPDVVIWRALL 348
F + P + Y ++ L G +E+A ++ M ++ D+V + ++
Sbjct: 389 --FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 131/278 (47%), Gaps = 23/278 (8%)
Query: 74 ATYPSLVAALISTYARCHQPHIAHHVFSRVM--DTFSKNLVIESLMKAGECDIARKVFDK 131
TY SL++ L S+ + + R + D F+ N +I++ +K G A + +++
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 132 MPVR----DVVTWNTLIGGYVKNVRFLDGLRLFRGMLSAEVEPDGFTFASVVTGCARLGA 187
M R D+VT++ LI G R + +F M+S PD T++ ++ G
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILING------ 335
Query: 188 LCNAKWV-HGL-----MLEKRVKLNYILSAALVDMYAKCGRIDVSKQVFDTVA----RDH 237
C +K V HG+ M ++ V N + L+ Y + G+++V++++F + +
Sbjct: 336 YCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPN 395
Query: 238 VSVWNAMINGLAVHGLALDAIAVFSRMEVENVLPDSITFVGILKACSHCGLVNEGREHFN 297
+ +N +++GL +G A+ + + M+ + D +T+ I++ G V + + +
Sbjct: 396 IITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYC 455
Query: 298 IMQNRFLIQPQLEHYGTMVDLLGRAGNLEEACNMIKAM 335
+ + L+ P + Y TM+ L + G EA + + M
Sbjct: 456 SLNCQGLM-PDIWTYTTMMLGLYKKGLRREADALFRKM 492