Miyakogusa Predicted Gene

Lj6g3v1463980.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1463980.1 tr|E3W9Q4|E3W9Q4_TOBAC Similar to T-phylloplanin
OS=Nicotiana tabacum GN=T-phylloplanin 2c PE=2
SV=1,42.86,1e-17,Pollen_Ole_e_I,Pollen Ole e 1
allergen/extensin,CUFF.59668.1
         (153 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G16660.1 | Symbols:  | Pollen Ole e 1 allergen and extensin f...    96   8e-21
AT3G16670.1 | Symbols:  | Pollen Ole e 1 allergen and extensin f...    86   8e-18

>AT3G16660.1 | Symbols:  | Pollen Ole e 1 allergen and extensin
           family protein | chr3:5676904-5677788 FORWARD LENGTH=180
          Length = 180

 Score = 96.3 bits (238), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 52/114 (45%), Positives = 72/114 (63%), Gaps = 2/114 (1%)

Query: 36  VNIQGTVSCTSNDNNVAAAIPGFSNAQVQLQCGE--KVFSDATTDGDGMFSMMVNPLLYD 93
           VNI G V C+ N      + P F+NA V+LQCG   +V S ATT+  G+FS+  + +   
Sbjct: 63  VNINGVVFCSLNGAPSGTSTPAFANAGVELQCGRQNRVVSTATTNAAGLFSLPTDSIQML 122

Query: 94  LSSLLSGCNLVIPTPLSKCNSNLPSIGGLISTLRYVGLSHVGTETIANMEPSGF 147
           LS+LLS C +V+ TPLS CN+NLPS+G L+S L  +G S  G   I ++ P+GF
Sbjct: 123 LSTLLSDCRVVVTTPLSTCNANLPSVGNLVSRLAMIGNSLTGLLNIISIIPAGF 176


>AT3G16670.1 | Symbols:  | Pollen Ole e 1 allergen and extensin
           family protein | chr3:5681500-5682111 FORWARD LENGTH=154
          Length = 154

 Score = 86.3 bits (212), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 81/150 (54%), Gaps = 11/150 (7%)

Query: 4   KHLIMMISLLIAVMAIPQAHAQLGILNDLLGSVN---IQGTVSCTSNDNNV-AAAIPGFS 59
           KH+   + LL  ++  P A+AQ G     LG +N   I G + CT N   +     P F+
Sbjct: 6   KHITFSLVLLCLIVVSPMANAQSG-----LGGINVPIINGVLFCTINGAPLNGTPAPAFA 60

Query: 60  NAQVQLQCGE--KVFSDATTDGDGMFSMMVNPLLYDLSSLLSGCNLVIPTPLSKCNSNLP 117
           NA VQLQCG   +V ++  T+  G+F+   N +   L +LL+ C +V+PTP S C++ LP
Sbjct: 61  NAVVQLQCGNLNRVVAETITNIAGLFTFSTNGIQISLPTLLNDCRIVVPTPRSSCDATLP 120

Query: 118 SIGGLISTLRYVGLSHVGTETIANMEPSGF 147
           S G LIS L  VG    G   I  + P+GF
Sbjct: 121 STGQLISQLNLVGSIVSGLLNIVAILPTGF 150