Miyakogusa Predicted Gene

Lj6g3v1450720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1450720.1 Non Chatacterized Hit- tr|I1MGM1|I1MGM1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28767
PE,77.24,0,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL;
CONDENSIN,Condensin subunit 1/Condensin-2 complex subuni,CUFF.59508.1
         (1250 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G15890.1 | Symbols:  | binding | chr4:9017453-9022745 FORWARD...  1314   0.0  
AT3G57060.2 | Symbols:  | binding | chr3:21115078-21121051 REVER...    58   4e-08
AT3G57060.1 | Symbols:  | binding | chr3:21115078-21121051 REVER...    58   4e-08

>AT4G15890.1 | Symbols:  | binding | chr4:9017453-9022745 FORWARD
            LENGTH=1314
          Length = 1314

 Score = 1314 bits (3401), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 658/1061 (62%), Positives = 811/1061 (76%), Gaps = 29/1061 (2%)

Query: 151  LDVRVLLPLLEKLVRVMGLIHLDLLPETLKSLVQTIAEVPVLALESFGNTVQYDRLVGLC 210
             D +++  +LEKL  V+  +HLD  P++LKSLVQT++E+P+LALE  G  + YDRL+ +C
Sbjct: 155  FDAKLMFIVLEKLGSVLSFVHLDRFPDSLKSLVQTVSEIPLLALEHSG-VLNYDRLMEMC 213

Query: 211  SRVLKEVLKPQHGEPSDTAAEVLKSLCPLVLMPKSQARTFALGFVT----GLVGDSDGVK 266
             ++L  VL   HG+ + TAAE+ KSL PL+LM K QAR+FALGFV+     L  D+  +K
Sbjct: 214  GKILGGVLNSDHGDMALTAAEISKSLTPLLLMGKHQARSFALGFVSRKLMSLAKDNPELK 273

Query: 267  KALVNFPRYLVKKAPDKAEPRALAVDSITEVVRVMALEDQAEFVKFVVKMGQGKQNLRLL 326
            K + N P++LV KAP+KAEPR  AV+++ E+V+ M +E Q+EFV FV+KM QGK N R+L
Sbjct: 274  KVVSNLPKFLVHKAPEKAEPRGFAVEAVLEIVKAMEVEGQSEFVDFVMKMCQGKSNFRVL 333

Query: 327  AVDLILNLVATLKDPLG-VNSEGEGKAVWGIWCLEALVKRCSDLSAVVRARALSSLAQLV 385
            AVD+I  L+++L +PLG ++SE   K  WG+ C++ALV+RCSD SA++RARALS+LAQ+V
Sbjct: 334  AVDIIPLLISSLGNPLGDISSENGLKDSWGLGCIDALVQRCSDTSALIRARALSNLAQVV 393

Query: 386  GLLSRDANASVVLKEFLGFGKAGDDNVEGGGINGMLRRRCVDEKAAVRKAAILLATNLTS 445
              LS D  +  +LK+ LGF   G+ +   G +  +L++RCVDEKAAVR+AA+LL T LTS
Sbjct: 394  EFLSGDERSRSILKQALGFN--GETSEGKGAVTDLLKKRCVDEKAAVRRAALLLVTKLTS 451

Query: 446  LLRGAIDEVVLKAMGMACSDPLVSMRKAAVAALSEAFRTFSAETVITEWLHSVPRLITDN 505
            L+ G  D  +LK MG +CSDPL+S+RKAAV+A+SEAFR  + E V TEWLHSVPR+I DN
Sbjct: 452  LMGGCFDGSILKTMGTSCSDPLISIRKAAVSAISEAFRICTDEIVTTEWLHSVPRMIMDN 511

Query: 506  ESSIQEECENMFQELVLDXXXXXXXXXXXXXXXXXNG-------LDKEMEMLFPQGIMFL 558
            E+SIQEECEN+F ELVL+                 N        LD+++E LFP+G++ L
Sbjct: 512  ETSIQEECENVFHELVLERILRAGNVLSPDSASLPNNRNTTSKDLDRDIEALFPEGVLVL 571

Query: 559  LREICNGEVSPWVKKICTNLGKKKRMNKRIVTALQNIIKESETRWLSHSMPIEKWTAPPG 618
            LRE+CN EVSPWV KIC +LGKKKR+  R+  ALQ IIKESE+ WLS SMPI +WTAP G
Sbjct: 572  LRELCNSEVSPWVTKICGSLGKKKRLKPRVALALQCIIKESESLWLSRSMPINRWTAPAG 631

Query: 619  AWFLLSEVSAFLPSLVEWKFLLHHWKLLDKHEVEGEFKSPFLQKSAFEEEDSTECNSVAW 678
            AWFLLSEVS +L   VEW+FL HHW+LLDK++V+G      L +    +E   ECNS  W
Sbjct: 632  AWFLLSEVSVYLSKSVEWEFLHHHWQLLDKNDVQG------LDEQG--DEQGVECNSSTW 683

Query: 679  ASDRVFLLQTMSNVSVELPPEAAADLGVSLLNRVEEFNMHSTEVDAHVKTLKTLCKRKAR 738
            A DRV LLQT+SNVS++LP E AADL  +LL ++E FN+HS EVDAHVK LKTLCK+KA 
Sbjct: 684  AGDRVCLLQTISNVSLQLPAEPAADLADNLLKKIENFNLHSAEVDAHVKALKTLCKKKAS 743

Query: 739  NLEEAEGLVLKCVNQVLSTAFKIIDKFVSENPGQNTESDLFTPPRSGTSKGRKSVRMCKS 798
              EEA+ LV K V QV   A K+ +K++      N      TP   G+ + ++   + K 
Sbjct: 744  TSEEADMLVKKWVEQVSLKASKVTEKYIEGVSSHN--HSFVTPATLGSRRSKRLDTVSKK 801

Query: 799  LSKATTAIYTIGSLVIVCPSADMSNIVPLLHTIITSGNSGPKL-DKLPGPATSLQQEAPS 857
            LSKA TA+YTIGS VI+ PSAD + IVP LHT+ITSGNS  KL +KLP     L+Q+AP 
Sbjct: 802  LSKAVTAVYTIGSCVIIYPSADTTKIVPFLHTVITSGNSDSKLKNKLPQANVCLKQKAPL 861

Query: 858  VYIQGWLAMGKLCLADGKLAKNYIPLFVQELENTESAALRNNIVVMMADFCVRYTALVDS 917
            +Y Q WL M K+CLADGKLAK Y+PLF QELE ++ AALRNN+VV M DFCV YTA+++ 
Sbjct: 862  LYSQSWLTMAKMCLADGKLAKRYLPLFAQELEKSDCAALRNNLVVAMTDFCVHYTAMIEC 921

Query: 918  YMTKITRCLLDPCELVRRQTFLLLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRRLADF 977
            Y+ KIT+ L DPCE+VRRQTF+LLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRRLADF
Sbjct: 922  YIPKITKRLRDPCEVVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRRLADF 981

Query: 978  LFGNILKVKAPLLAYNSFVEAVYVLNDCHAHNGHR--ESQGSRRESQVFSIRGTDERSRS 1035
            LFG+ILKVKAPLLAYNSFVEA+YVLNDCHAH GH   +S+ SR + QVFSIRG DER+RS
Sbjct: 982  LFGSILKVKAPLLAYNSFVEAIYVLNDCHAHTGHSNPDSKQSRTKDQVFSIRGNDERARS 1041

Query: 1036 KRMHIYVSLLKQMAPEHLLATFAKLCAEILAAASDGMLNIEDATGQSVLQDTFQILGCKE 1095
            KRM IYV+LLKQMAPEHLLATFAKLCAEILAAASDGMLNIED TGQSVLQD FQIL CKE
Sbjct: 1042 KRMQIYVTLLKQMAPEHLLATFAKLCAEILAAASDGMLNIEDVTGQSVLQDAFQILACKE 1101

Query: 1096 IRLPSSRAASSETADVEEEGGENA-ARGKAITQAVKKGLIQNTIPIFIELKRLLETKNSP 1154
            IRL  SR ASSETAD+EEEGG+ A A+G+AIT AV+KGLIQNTIPIFIELKRLLE+KNSP
Sbjct: 1102 IRLSVSRGASSETADIEEEGGDAATAKGRAITHAVRKGLIQNTIPIFIELKRLLESKNSP 1161

Query: 1155 LIGSLMECLRVLLKDYKTEIDEILIADKQLQKELIYDMQKY 1195
            L GSLM+CLRVLLKDYK EI+E+L+ADKQLQKEL+YDMQK+
Sbjct: 1162 LTGSLMDCLRVLLKDYKNEIEEMLVADKQLQKELVYDMQKH 1202


>AT3G57060.2 | Symbols:  | binding | chr3:21115078-21121051 REVERSE
            LENGTH=1415
          Length = 1415

 Score = 58.2 bits (139), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 1/135 (0%)

Query: 850  SLQQEAPSVYIQGWLAMGKLCLADGKLAKNYIPLFVQELENTESAALRNNIVVMMADFCV 909
            SL Q+ P +     LA+ +  + D    ++ + L    +EN  S  +R+N  + + D  V
Sbjct: 937  SLLQKHPELQASAMLALCRFMIIDASFCESNLQLLFTVVENAPSEVVRSNCTLSLGDLAV 996

Query: 910  RYTALVDSYMTKITRCLLDPCELVRRQTFLLLSRLLQRDYVKWRGVLFLRFLLSLVDESE 969
            R+  L++ +   +   L D    VR+   L+LS L+  D +K +G ++    + + D+ E
Sbjct: 997  RFPNLLEPWTENMYARLRDASVSVRKNAVLVLSHLILNDMMKVKGYIY-EMAICIEDDVE 1055

Query: 970  KIRRLADFLFGNILK 984
            +I  LA   F  + K
Sbjct: 1056 RISSLAKLFFHELSK 1070


>AT3G57060.1 | Symbols:  | binding | chr3:21115078-21121051 REVERSE
            LENGTH=1396
          Length = 1396

 Score = 58.2 bits (139), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 1/135 (0%)

Query: 850  SLQQEAPSVYIQGWLAMGKLCLADGKLAKNYIPLFVQELENTESAALRNNIVVMMADFCV 909
            SL Q+ P +     LA+ +  + D    ++ + L    +EN  S  +R+N  + + D  V
Sbjct: 937  SLLQKHPELQASAMLALCRFMIIDASFCESNLQLLFTVVENAPSEVVRSNCTLSLGDLAV 996

Query: 910  RYTALVDSYMTKITRCLLDPCELVRRQTFLLLSRLLQRDYVKWRGVLFLRFLLSLVDESE 969
            R+  L++ +   +   L D    VR+   L+LS L+  D +K +G ++    + + D+ E
Sbjct: 997  RFPNLLEPWTENMYARLRDASVSVRKNAVLVLSHLILNDMMKVKGYIY-EMAICIEDDVE 1055

Query: 970  KIRRLADFLFGNILK 984
            +I  LA   F  + K
Sbjct: 1056 RISSLAKLFFHELSK 1070