Miyakogusa Predicted Gene

Lj6g3v1444510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1444510.1 Non Chatacterized Hit- tr|D8SQ60|D8SQ60_SELML
Putative uncharacterized protein OS=Selaginella moelle,46.49,4e-19,
,CUFF.59492.1
         (108 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G24860.1 | Symbols: FPF1, ATFPF1 | flowering promoting factor...   137   2e-33
AT4G31380.1 | Symbols: FLP1 | FPF1-like protein 1 | chr4:1522983...   134   9e-33
AT5G10625.1 | Symbols:  | BEST Arabidopsis thaliana protein matc...   134   1e-32

>AT5G24860.1 | Symbols: FPF1, ATFPF1 | flowering promoting factor 1
           | chr5:8541822-8542154 FORWARD LENGTH=110
          Length = 110

 Score =  137 bits (344), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 66/109 (60%), Positives = 85/109 (77%), Gaps = 3/109 (2%)

Query: 1   MSGVWVFRNNGVMKLVENPGAEALESGRRRKVLVHTASNEVITSYAVLEHKLYSLGWERY 60
           MSGVWVF+N GV++LVENP     ++  RRKV+V+  + EV++SY+ LE  L SLGWERY
Sbjct: 1   MSGVWVFKN-GVIRLVENPNQSGSDTQNRRKVMVYLPTGEVVSSYSTLEQILQSLGWERY 59

Query: 61  YD--DPDLLQFHKRSTVHLISLPRDFSRFKSMHMFDIVVKNKNSFEVRD 107
           +   D DLLQFHKRS++ LISLPRDF++F S++M+DIVVKN N F VRD
Sbjct: 60  FGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHVRD 108


>AT4G31380.1 | Symbols: FLP1 | FPF1-like protein 1 |
           chr4:15229837-15230382 FORWARD LENGTH=181
          Length = 181

 Score =  134 bits (338), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 71/124 (57%), Positives = 87/124 (70%), Gaps = 16/124 (12%)

Query: 1   MSGVWVFRNNGVMKLVENPGAEAL-------------ESGRRRKVLVHTASNEVITSYAV 47
           MSGVWVF  NGVM+LVENP  ++              +   RRK+LVH  S+EV++SY  
Sbjct: 58  MSGVWVFNKNGVMRLVENPYNQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVVSSYGS 117

Query: 48  LEHKLYSLGWERYY--DDPD-LLQFHKRSTVHLISLPRDFSRFKSMHMFDIVVKNKNSFE 104
           LE  L +LGWERYY  D+ D LLQFHKR+++ LISLPRDFS+F S+HM+DIVVKN N F 
Sbjct: 118 LEKILKNLGWERYYSGDNTDHLLQFHKRTSIDLISLPRDFSKFNSIHMYDIVVKNPNVFH 177

Query: 105 VRDM 108
           VRDM
Sbjct: 178 VRDM 181


>AT5G10625.1 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: flowering promoting factor 1 (TAIR:AT5G24860.1); Has
           35333 Blast hits to 34131 proteins in 2444 species:
           Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi -
           991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610
           (source: NCBI BLink). | chr5:3358934-3359272 FORWARD
           LENGTH=112
          Length = 112

 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/112 (60%), Positives = 86/112 (76%), Gaps = 5/112 (4%)

Query: 1   MSGVWVFRNNGVMKLVENP---GAEALESGRRRKVLVHTASNEVITSYAVLEHKLYSLGW 57
           MSGVWVF NNGV++LVENP   G  + +S  RR VLV+  + E ++SY+ LE  L SLGW
Sbjct: 1   MSGVWVF-NNGVIRLVENPNQSGGVSTQSHGRRNVLVYLPTGEAVSSYSSLEQILRSLGW 59

Query: 58  ERYYD-DPDLLQFHKRSTVHLISLPRDFSRFKSMHMFDIVVKNKNSFEVRDM 108
           ERY+  D DL+Q+HKRS++ LISLPRDFS+F S++M+DIVVKN NSF VRD 
Sbjct: 60  ERYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVRDF 111