Miyakogusa Predicted Gene

Lj6g3v1442310.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1442310.1 tr|A9T655|A9T655_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_140834,42.98,2e-17, ,CUFF.59489.1
         (195 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G21400.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   191   3e-49

>AT3G21400.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN: N-terminal
           protein myristoylation; EXPRESSED IN: 22 plant
           structures; EXPRESSED DURING: 13 growth stages; Has 29
           Blast hits to 29 proteins in 12 species: Archae - 0;
           Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 27;
           Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
           | chr3:7534824-7536293 REVERSE LENGTH=188
          Length = 188

 Score =  191 bits (485), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 105/194 (54%), Positives = 139/194 (71%), Gaps = 10/194 (5%)

Query: 1   MGQAFRRASGRIRAASEADTSSLSRPKPAVDHR--PPTKVAADKSAEISKAAQQDVLEAD 58
           MGQ  RRA G+I+   E + SS SR   ++D R  P  +++A KS+  S AA   V  +D
Sbjct: 1   MGQQLRRAVGKIK---EVERSSPSRV--SIDRRSLPTEELSAVKSSP-STAAVDGV--SD 52

Query: 59  DRPRVNVDNILEERDPSYDAMLGQMVGRIKSKPGGKSEMGEAFLVEKYRRPMPRLRNTKP 118
              R + DN+LEERDP YD ML QMVGRIK+KPGGK+EMGEA +VE  +RP+P+LRNT P
Sbjct: 53  KGRRTSEDNVLEERDPKYDTMLNQMVGRIKAKPGGKAEMGEASVVETSKRPLPKLRNTTP 112

Query: 119 DSGGYEERPVPTGTLNVAQLRQIILLHNGKAEDHNGPMDAHQIAEKFQVDVVQIQRILQF 178
           +S  YEE PVP GTLNVAQ+R I+LL  GK++DH+GPM  ++IAEK+++DV Q+Q+I QF
Sbjct: 113 ESTRYEENPVPQGTLNVAQVRHIMLLFQGKSQDHHGPMGVNEIAEKYRIDVSQVQKITQF 172

Query: 179 LSEPPEGSKEDKNK 192
           LS P E + + K +
Sbjct: 173 LSLPQEITDKQKKQ 186