Miyakogusa Predicted Gene

Lj6g3v1421120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1421120.1 tr|A9SKM6|A9SKM6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_165447,23.51,4e-16,Glyco_transf_92,Domain of unknown
function DUF23; SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,NULL,CUFF.59483.1
         (382 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G44670.1 | Symbols:  | Domain of unknown function (DUF23) | c...   560   e-160
AT4G20170.1 | Symbols:  | Domain of unknown function (DUF23) | c...   538   e-153
AT2G33570.1 | Symbols:  | Domain of unknown function (DUF23) | c...   434   e-122
AT5G48190.1 | Symbols:  | Domain of unknown function (DUF23) | c...   149   4e-36
AT3G60990.1 | Symbols:  | Domain of unknown function (DUF23) | c...   149   4e-36
AT3G07380.1 | Symbols:  | Domain of unknown function (DUF23) | c...   146   3e-35

>AT5G44670.1 | Symbols:  | Domain of unknown function (DUF23) |
           chr5:18019209-18021266 REVERSE LENGTH=519
          Length = 519

 Score =  560 bits (1443), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 263/389 (67%), Positives = 315/389 (80%), Gaps = 12/389 (3%)

Query: 1   MGAYRGGLNTFAIVGLASKPLHVYSKPTYQCEWVPLTGAGENNTVTTVGYKILPDWGYGH 60
           M AYRGG+NTFA++GL+SKPLHVYS PTY+CEW+PL  +  +N + T G KIL DWGYG 
Sbjct: 131 MNAYRGGVNTFAVIGLSSKPLHVYSHPTYRCEWIPLNQS--DNRILTDGTKILTDWGYGR 188

Query: 61  VYTVVVVNCTFP--VPLNVENSGGKLILYASKSGGGNASRNITNRMEVLTEAPGTLDTAL 118
           VYT VVVNCTFP    +N +N+GG L+L+A+    G+  RNIT+ + VLTE P T+D AL
Sbjct: 189 VYTTVVVNCTFPSNTVINPKNTGGTLLLHATT---GDTDRNITDSIPVLTETPNTVDFAL 245

Query: 119 FTS----KPKYDYFYCGSSLYGPLNPQRVREWIAYHVKFFGPSSHFVIHDAGGVHEQVRE 174
           + S    + KYDY YCGSSLYG L+PQR+REWIAYHV+FFG  SHFV+HDAGG+ E+V E
Sbjct: 246 YESNLRRREKYDYLYCGSSLYGNLSPQRIREWIAYHVRFFGERSHFVLHDAGGITEEVFE 305

Query: 175 VLKPWIELGYVTLQDIRDQERFDGYYHNQFMVVNDCLHRYKFMGKWMFFFDVDEFIYVPP 234
           VLKPWIELG VT+ DIR+QERFDGYYHNQFMVVNDCLHRY+FM KWMFFFDVDEFIYVP 
Sbjct: 306 VLKPWIELGRVTVHDIREQERFDGYYHNQFMVVNDCLHRYRFMAKWMFFFDVDEFIYVPA 365

Query: 235 KSTIKTVLDSLSEYNQFTIEQMPMSSKLCLSSD-YGKTYRKWGFEKFVYKDVKKGIRRDR 293
           KS+I +V+ SL EY+QFTIEQMPMSS+LC   D   +TYRKWGFEK  Y+DVKK  RRDR
Sbjct: 366 KSSISSVMVSLEEYSQFTIEQMPMSSQLCYDGDGPARTYRKWGFEKLAYRDVKKVPRRDR 425

Query: 294 KYAVQPRSLYATGVHMSQNLEGKTTHKTEGKIKYFHYHGTIAARRESCKMLINSTEITYD 353
           KYAVQPR+++ATGVHMSQ+L+GKT H+ EGKI+YFHYHG+I+ RRE C+ L N T I ++
Sbjct: 426 KYAVQPRNVFATGVHMSQHLQGKTYHRAEGKIRYFHYHGSISQRREPCRHLYNGTRIVHE 485

Query: 354 KNPYVLDTTMRDIAGVIKKFELKMIGDRL 382
            NPYVLDTTMRDI   +K FE++ IGDRL
Sbjct: 486 NNPYVLDTTMRDIGLAVKTFEIRTIGDRL 514


>AT4G20170.1 | Symbols:  | Domain of unknown function (DUF23) |
           chr4:10896810-10898794 FORWARD LENGTH=504
          Length = 504

 Score =  538 bits (1386), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 249/388 (64%), Positives = 307/388 (79%), Gaps = 11/388 (2%)

Query: 1   MGAYRGGLNTFAIVGLASKPLHVYSKPTYQCEWVPLTGAGENNTVTTVGYKILPDWGYGH 60
           M AYRGG+N+FA++GL+SKPLHVY  P+Y+CEWV L      + ++T G+KIL DWGYG 
Sbjct: 117 MSAYRGGVNSFAVIGLSSKPLHVYGHPSYRCEWVSLDPT--QDPISTTGFKILTDWGYGR 174

Query: 61  VYTVVVVNCTFPV--PLNVENSGGKLILYASKSGGGNASRNITNRMEVLTEAPGTLDTAL 118
           +YT VVVNCTF     +N +NSGG LIL+A+    G+ + N+T+ + VLTE P ++D  L
Sbjct: 175 IYTTVVVNCTFSSISAVNPQNSGGTLILHATT---GDPTLNLTDSISVLTEPPKSVDFDL 231

Query: 119 FTSKPK---YDYFYCGSSLYGPLNPQRVREWIAYHVKFFGPSSHFVIHDAGGVHEQVREV 175
           + S  K   YDY YCGSSLYG L+PQRVREWIAYHV+FFG  SHFV+HDAGG+HE+V EV
Sbjct: 232 YNSTKKTKKYDYLYCGSSLYGNLSPQRVREWIAYHVRFFGERSHFVLHDAGGIHEEVFEV 291

Query: 176 LKPWIELGYVTLQDIRDQERFDGYYHNQFMVVNDCLHRYKFMGKWMFFFDVDEFIYVPPK 235
           LKPWIELG VTL DIRDQERFDGYYHNQFM+VNDCLHRY+FM KWMFFFDVDEF++VP K
Sbjct: 292 LKPWIELGRVTLHDIRDQERFDGYYHNQFMIVNDCLHRYRFMTKWMFFFDVDEFLHVPVK 351

Query: 236 STIKTVLDSLSEYNQFTIEQMPMSSKLCLSSD-YGKTYRKWGFEKFVYKDVKKGIRRDRK 294
            TI +V++SL EY+QFTIEQMPMSS++C S D   +TYRKWG EK  Y+DVKK  RRDRK
Sbjct: 352 ETISSVMESLEEYSQFTIEQMPMSSRICYSGDGPARTYRKWGIEKLAYRDVKKVPRRDRK 411

Query: 295 YAVQPRSLYATGVHMSQNLEGKTTHKTEGKIKYFHYHGTIAARRESCKMLINSTEITYDK 354
           YAVQP +++ATGVHMSQNL+GKT HK E KI+YFHYHG+I+ RRE C+ L N + + ++ 
Sbjct: 412 YAVQPENVFATGVHMSQNLQGKTYHKAESKIRYFHYHGSISQRREPCRQLFNDSRVVFEN 471

Query: 355 NPYVLDTTMRDIAGVIKKFELKMIGDRL 382
            PYVLDTT+ D+   ++ FEL+ IGDRL
Sbjct: 472 TPYVLDTTICDVGLAVRTFELRTIGDRL 499


>AT2G33570.1 | Symbols:  | Domain of unknown function (DUF23) |
           chr2:14217361-14219043 FORWARD LENGTH=496
          Length = 496

 Score =  434 bits (1117), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 209/383 (54%), Positives = 268/383 (69%), Gaps = 12/383 (3%)

Query: 1   MGAYRGGLNTFAIVGLASKPLHVYSKPTYQCEWVPLTGAGENNTVTTVGYKILPDWGYGH 60
           MGAYRGG  TF+++GLASKP+HVY KP Y+CEW+   G     ++     KILPDWGYG 
Sbjct: 115 MGAYRGGPTTFSVIGLASKPIHVYGKPWYKCEWISNNGT----SIRAKAQKILPDWGYGR 170

Query: 61  VYTVVVVNCTFPVPLNVENSGGKLILYASKSGGGNASRNITNRMEVLTEAPGTLDTALFT 120
           VYTVVVVNCTF    N +N+GGKLIL A      N S  +  R   L E+ G  D + ++
Sbjct: 171 VYTVVVVNCTFNSNPNSDNTGGKLILNAYY----NESPKLFERFTTLEESAGIYDESKYS 226

Query: 121 SKPKYDYFYCGSSLYGPLNPQRVREWIAYHVKFFGPSSHFVIHDAGGVHEQVREVLKPWI 180
              +YDY YCGSSLYG ++  R+REW+AYH  FFG  SHFV HDAGGV  +VR+VL+PWI
Sbjct: 227 PPYQYDYLYCGSSLYGNVSASRMREWMAYHAWFFGDKSHFVFHDAGGVSPEVRKVLEPWI 286

Query: 181 ELGYVTLQDIRDQERFDGYYHNQFMVVNDCLHRYKFMGKWMFFFDVDEFIYVPPKSTIKT 240
             G VT+Q+IRDQ ++DGYY+NQF++VNDCLHRY++   W FFFDVDE+IY+P  +T+++
Sbjct: 287 RAGRVTVQNIRDQSQYDGYYYNQFLIVNDCLHRYRYAANWTFFFDVDEYIYLPHGNTLES 346

Query: 241 VLDSLSEYNQFTIEQMPMSSKLCLSSDYGKTYRKWGFEKFVYKDVKKGIRRDRKYAVQPR 300
           VLD  S   QFTIEQ PMSS LC++       R+WGFEK ++KD +  IRRDRKYA+Q +
Sbjct: 347 VLDEFSVNTQFTIEQNPMSSVLCINDSSQDYPRQWGFEKLLFKDSRTKIRRDRKYAIQAK 406

Query: 301 SLYATGVHMSQNLEGKTTHKTEGKIKYFHYHGTIAARRESCK-MLINSTE---ITYDKNP 356
           + +ATGVHMS+N+ GKT HKTE KI+Y+HYH TI    E C+ ML NS +     Y+K P
Sbjct: 407 NAFATGVHMSENIVGKTLHKTETKIRYYHYHNTITVHEELCREMLPNSAKKKVTLYNKLP 466

Query: 357 YVLDTTMRDIAGVIKKFELKMIG 379
           YV D  M+ +   IK+FE K +G
Sbjct: 467 YVYDDNMKKLVKTIKEFEQKKLG 489


>AT5G48190.1 | Symbols:  | Domain of unknown function (DUF23) |
           chr5:19543479-19544169 FORWARD LENGTH=102
          Length = 102

 Score =  149 bits (375), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 70/102 (68%), Positives = 83/102 (81%), Gaps = 1/102 (0%)

Query: 217 MGKWMFFFDVDEFIYVPPKSTIKTVLDSLSEYNQFTIEQMPMSSKLCLSSD-YGKTYRKW 275
           M KWMFFFDVDEF++VP K TI +V++SL EY QFTIE MPMSS++C S D   +TYRKW
Sbjct: 1   MTKWMFFFDVDEFLHVPVKETISSVMESLEEYFQFTIELMPMSSRVCYSGDGPARTYRKW 60

Query: 276 GFEKFVYKDVKKGIRRDRKYAVQPRSLYATGVHMSQNLEGKT 317
           G EK  Y+DVKK  RRDRKYAVQP +++A GVHMSQNL+GKT
Sbjct: 61  GIEKLAYRDVKKVPRRDRKYAVQPENVFAIGVHMSQNLQGKT 102


>AT3G60990.1 | Symbols:  | Domain of unknown function (DUF23) |
           chr3:22569283-22569973 REVERSE LENGTH=102
          Length = 102

 Score =  149 bits (375), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 70/102 (68%), Positives = 83/102 (81%), Gaps = 1/102 (0%)

Query: 217 MGKWMFFFDVDEFIYVPPKSTIKTVLDSLSEYNQFTIEQMPMSSKLCLSSD-YGKTYRKW 275
           M KWMFFFDVDEF++VP K TI +V++SL EY QFTIE MPMSS++C S D   +TYRKW
Sbjct: 1   MTKWMFFFDVDEFLHVPVKETISSVMESLEEYFQFTIELMPMSSRVCYSGDGPARTYRKW 60

Query: 276 GFEKFVYKDVKKGIRRDRKYAVQPRSLYATGVHMSQNLEGKT 317
           G EK  Y+DVKK  RRDRKYAVQP +++A GVHMSQNL+GKT
Sbjct: 61  GIEKLAYRDVKKVPRRDRKYAVQPENVFAIGVHMSQNLQGKT 102


>AT3G07380.1 | Symbols:  | Domain of unknown function (DUF23) |
           chr3:2361324-2362014 REVERSE LENGTH=102
          Length = 102

 Score =  146 bits (368), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 69/102 (67%), Positives = 82/102 (80%), Gaps = 1/102 (0%)

Query: 217 MGKWMFFFDVDEFIYVPPKSTIKTVLDSLSEYNQFTIEQMPMSSKLCLSSD-YGKTYRKW 275
           M KWMFF DVDEF++VP K TI +V++SL EY QFTIE MPMSS++C S D   +TYRKW
Sbjct: 1   MTKWMFFVDVDEFLHVPVKETISSVMESLEEYFQFTIELMPMSSQVCYSGDGPARTYRKW 60

Query: 276 GFEKFVYKDVKKGIRRDRKYAVQPRSLYATGVHMSQNLEGKT 317
           G EK  Y+DVKK  RRDRKYAVQP +++A GVHMSQNL+GKT
Sbjct: 61  GIEKLAYRDVKKVPRRDRKYAVQPENVFAIGVHMSQNLQGKT 102