Miyakogusa Predicted Gene
- Lj6g3v1417020.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1417020.1 CUFF.59473.1
(348 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G46550.1 | Symbols: SOS5 | Fasciclin-like arabinogalactan fam... 233 1e-61
AT3G60900.1 | Symbols: FLA10 | FASCICLIN-like arabinogalactan-pr... 79 5e-15
AT2G45470.1 | Symbols: FLA8, AGP8 | FASCICLIN-like arabinogalact... 74 1e-13
AT5G44130.1 | Symbols: FLA13 | FASCICLIN-like arabinogalactan pr... 74 2e-13
AT5G03170.1 | Symbols: FLA11, ATFLA11 | FASCICLIN-like arabinoga... 71 1e-12
AT1G03870.1 | Symbols: FLA9 | FASCICLIN-like arabinoogalactan 9 ... 71 1e-12
AT5G60490.1 | Symbols: FLA12 | FASCICLIN-like arabinogalactan-pr... 68 7e-12
AT2G20520.1 | Symbols: FLA6 | FASCICLIN-like arabinogalactan 6 |... 67 2e-11
AT2G04780.2 | Symbols: FLA7 | FASCICLIN-like arabinoogalactan 7 ... 67 2e-11
AT2G04780.1 | Symbols: FLA7 | FASCICLIN-like arabinoogalactan 7 ... 67 2e-11
AT5G55730.2 | Symbols: FLA1 | FASCICLIN-like arabinogalactan 1 |... 63 3e-10
AT5G55730.1 | Symbols: FLA1 | FASCICLIN-like arabinogalactan 1 |... 63 3e-10
AT4G12730.1 | Symbols: FLA2 | FASCICLIN-like arabinogalactan 2 |... 54 1e-07
>AT3G46550.1 | Symbols: SOS5 | Fasciclin-like arabinogalactan family
protein | chr3:17136612-17137874 REVERSE LENGTH=420
Length = 420
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 157/221 (71%), Gaps = 18/221 (8%)
Query: 84 VLSLVKTLPYNVTIFSVNALLIPGGFDLMASET-----------GPTSFINITKALIDGH 132
VL L++T P N+T+ +V++L++P G D+ ASET P + IN+T+ LI+GH
Sbjct: 157 VLKLLETKPPNITVLTVDSLIVPTGIDITASETLTPPPTSTSLSPPPAGINLTQILINGH 216
Query: 133 NFNXXXXXXXXXXXXEEFESDEGGAGITLFVPVDDAFADLPASISLQSLPADKKAVVLRF 192
NFN EFE+DE GAGIT+FVP D AF+DLP++++LQSLPA++KA VL+F
Sbjct: 217 NFNVALSLLVASGVITEFENDERGAGITVFVPTDSAFSDLPSNVNLQSLPAEQKAFVLKF 276
Query: 193 HVLHSYYPLGSLQSITNPSQPTLATEAMGAGFYTLNISAFNGSLA-INSGIVQASVTQTV 251
HVLHSYY LGSL+SITNP QPTLATE MGAG YTLNIS NGS+ INSG+V A VTQT
Sbjct: 277 HVLHSYYTLGSLESITNPVQPTLATEEMGAGSYTLNISRVNGSIVTINSGVVLAVVTQTA 336
Query: 252 FDEKPVSIFGISRVLLPKEIFGKNPIVSSRTAPQDGAPPPE 292
FD+ PVS+FG+S+VLLPKE+F K+ P APP E
Sbjct: 337 FDQNPVSVFGVSKVLLPKELFPKS------GQPVATAPPQE 371
>AT3G60900.1 | Symbols: FLA10 | FASCICLIN-like
arabinogalactan-protein 10 | chr3:22499573-22500841
REVERSE LENGTH=422
Length = 422
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 93/190 (48%), Gaps = 11/190 (5%)
Query: 88 VKTLPYNVTIFSVNALLIPGGFDLMASETGPTSFINITKALIDGHNFNXXXXXXXXXXXX 147
VK +PYN+++ +NA +I G L A NIT L++
Sbjct: 156 VKQIPYNISVLEINAPIIAPGI-LTAPAPSSAGVSNIT-GLLEKAGCKTFANLLVSSGVI 213
Query: 148 EEFESDEGGAGITLFVPVDDAFA--DLPASISLQSLPADKKAVVLRFHVLHSYYPLGSLQ 205
+ FES G+T+F P D+AF +P L +L + +L +H L Y P GSL+
Sbjct: 214 KTFESTVE-KGLTVFAPSDEAFKARGVP---DLTNLTQAEVVSLLEYHALAEYKPKGSLK 269
Query: 206 SITNPSQPTLATEAMGAGFYTLNISAFNGSLAINSGIVQASVTQTVFDEKPVSIFGISRV 265
+ + TLAT GAG Y L S + +++G+ + + TV DE PV IF + V
Sbjct: 270 T-NKDAISTLATN--GAGKYDLTTSTSGDEVILHTGVGPSRLADTVVDETPVVIFTVDNV 326
Query: 266 LLPKEIFGKN 275
LLP E+FGK+
Sbjct: 327 LLPAELFGKS 336
>AT2G45470.1 | Symbols: FLA8, AGP8 | FASCICLIN-like arabinogalactan
protein 8 | chr2:18742797-18744059 REVERSE LENGTH=420
Length = 420
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 12/190 (6%)
Query: 88 VKTLPYNVTIFSVNALLIPGGFDLMASETGPTSFINITKALIDGHNFNXXXXXXXXXXXX 147
VK +PYN++I ++A +I G ++ + S NIT L++
Sbjct: 156 VKQIPYNISILEIDAPIIAPG--VLTAPAPSASLSNIT-GLLEKAGCKTFANLLVSSGVL 212
Query: 148 EEFESDEGGAGITLFVPVDDAFA--DLPASISLQSLPADKKAVVLRFHVLHSYYPLGSLQ 205
+ +ES G+T+F P D+AF +P L L + +L +H L Y P GSL+
Sbjct: 213 KTYES-AVEKGLTVFAPSDEAFKAEGVP---DLTKLTQAEVVSLLEYHALAEYKPKGSLK 268
Query: 206 SITNPSQPTLATEAMGAGFYTLNISAFNGSLAINSGIVQASVTQTVFDEKPVSIFGISRV 265
+ N + TLAT GAG + L S + +++G+ + + TV D PV IF + V
Sbjct: 269 TNKN-NISTLATN--GAGKFDLTTSTSGDEVILHTGVAPSRLADTVLDATPVVIFTVDNV 325
Query: 266 LLPKEIFGKN 275
LLP E+FGK+
Sbjct: 326 LLPAELFGKS 335
>AT5G44130.1 | Symbols: FLA13 | FASCICLIN-like arabinogalactan
protein 13 precursor | chr5:17761128-17761871 FORWARD
LENGTH=247
Length = 247
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 80/144 (55%), Gaps = 2/144 (1%)
Query: 158 GITLFVPVDDAFADLPASISLQSLPADKKAVVLRFHVLHSYYPLGSLQSITNPSQPTLAT 217
G+T+ P D+AF +L +L L D + ++ +HV +Y L L S++NP + +
Sbjct: 73 GMTVLAPTDNAFQNLKPG-TLNKLSPDDQVKLILYHVSPKFYTLEDLLSVSNPVRTQASG 131
Query: 218 EAMGAGFYTLNISAFNGSLAINSGIVQASVTQTVFDEKPVSIFGISRVLLPKEIFGKNPI 277
+G G Y LN + + +++G+V+ ++ ++ E+P++++ + VLLP+E+FG+ I
Sbjct: 132 RDVG-GVYGLNFTGQGNQVNVSTGVVETRLSTSLRQERPLAVYVVDMVLLPEEMFGERKI 190
Query: 278 VSSRTAPQDGAPPPEEDAHSPETS 301
P+ +P +D+ S + +
Sbjct: 191 SPMAPPPKSKSPDVSDDSESSKKA 214
>AT5G03170.1 | Symbols: FLA11, ATFLA11 | FASCICLIN-like
arabinogalactan-protein 11 | chr5:752898-753638 REVERSE
LENGTH=246
Length = 246
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 19/182 (10%)
Query: 117 GPTSFINITKALIDGHNFNXXXXXXXXXXXXEEFESD---EGGAGITLFVPVDDAFADLP 173
GP+ NIT L F ++ + G+T+F P D+AF L
Sbjct: 30 GPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTDNAFNSLK 89
Query: 174 ASISLQSLPADKKAVVLRFHVLHSYYPLGSLQSITNPSQPTLATEAMGA--GFYTLNISA 231
+ +L SL +K +++FHVL + + Q+++NP L T+A G + LNI++
Sbjct: 90 SG-TLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNP----LRTQAGDGQNGKFPLNITS 144
Query: 232 FNGSLAINSGIVQASVTQTVFDEKPVSIFGISRVLLPKEIFGKNPIVSSRTAPQDGAPPP 291
+ I +G+V A+V +V+ +K ++++ + +VLLP +FG S AP AP P
Sbjct: 145 SGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFG------SSVAP---APAP 195
Query: 292 EE 293
E+
Sbjct: 196 EK 197
>AT1G03870.1 | Symbols: FLA9 | FASCICLIN-like arabinoogalactan 9 |
chr1:982625-983368 REVERSE LENGTH=247
Length = 247
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 81/146 (55%), Gaps = 7/146 (4%)
Query: 158 GITLFVPVDDAFADLPASISLQSLPADKKAVVLRFHVLHSYYPLGSLQSITNPSQPTLAT 217
G+T+F P D+AF +L +L L D + ++ +HV YY + L S++NP + T
Sbjct: 76 GMTVFAPTDNAFQNLKPG-TLNQLSPDDQVKLILYHVSPKYYSMDDLLSVSNP----VRT 130
Query: 218 EAMGA--GFYTLNISAFNGSLAINSGIVQASVTQTVFDEKPVSIFGISRVLLPKEIFGKN 275
+A G G Y LN + + +++G V+ ++ ++ ++P++++ + VLLP E+FG++
Sbjct: 131 QASGRDNGVYGLNFTGQTNQINVSTGYVETRISNSLRQQRPLAVYVVDMVLLPGEMFGEH 190
Query: 276 PIVSSRTAPQDGAPPPEEDAHSPETS 301
+ AP+ + +D+ S + +
Sbjct: 191 KLSPIAPAPKSKSGGVTDDSGSTKKA 216
>AT5G60490.1 | Symbols: FLA12 | FASCICLIN-like
arabinogalactan-protein 12 | chr5:24325916-24326665
REVERSE LENGTH=249
Length = 249
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 71/117 (60%), Gaps = 7/117 (5%)
Query: 158 GITLFVPVDDAFADLPASISLQSLPADKKAVVLRFHVLHSYYPLGSLQSITNPSQPTLAT 217
GIT+F P D +F L A +L SL +++ +++FHV+ SY + Q+I+NP L T
Sbjct: 76 GITIFAPSDSSFTGLKAG-TLNSLTDEQQVELIQFHVIPSYVSSSNFQTISNP----LRT 130
Query: 218 EAMGA--GFYTLNISAFNGSLAINSGIVQASVTQTVFDEKPVSIFGISRVLLPKEIF 272
+A + G + LN++ ++ I SG+ +V+ V+ + ++++ + +VLLP+++F
Sbjct: 131 QAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLPQQVF 187
>AT2G20520.1 | Symbols: FLA6 | FASCICLIN-like arabinogalactan 6 |
chr2:8840663-8841406 FORWARD LENGTH=247
Length = 247
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 88/177 (49%), Gaps = 18/177 (10%)
Query: 122 INITKALIDGHNFNXXXXXXXXXXXXEEF--ESDEGGAGITLFVPVDDAFADLPASISLQ 179
IN+T L GH F + + + G+T+F P D+AF L +L
Sbjct: 37 INLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPG-TLN 95
Query: 180 SLPADKKAVVLRFHVLHSYYPLGSLQSITNPSQPTLATEAMG--AGFYTLNIS--AFNGS 235
SL ++ ++ +H++ YY L L +NP + T+A G G + LN + A +
Sbjct: 96 SLTYQQQIQLMLYHIIPKYYSLSDLLLASNP----VRTQATGQDGGVFGLNFTGQAQSNQ 151
Query: 236 LAINSGIVQASVTQTVFDEKPVSIFGISRVLLPKEIFGKNPIVSSRTAPQDGAPPPE 292
+ +++G+V+ + + + P++++ + VLLP+E+FG ++T P GAP P+
Sbjct: 152 VNVSTGVVETRINNALRQQFPLAVYVVDSVLLPEELFG------TKTTP-TGAPAPK 201
>AT2G04780.2 | Symbols: FLA7 | FASCICLIN-like arabinoogalactan 7 |
chr2:1677488-1678252 FORWARD LENGTH=254
Length = 254
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 151 ESDEGGAGITLFVPVDDAFADLPASISLQSLPADKKAVVLRFHVLHSYYPLGSLQSITNP 210
+++ GIT+FVP DDAF + L +L D+ ++ FH L YY L ++++
Sbjct: 76 QANNTEEGITIFVPKDDAF-KAQKNPPLSNLTKDQLKQLVLFHALPHYYSLSEFKNLSQ- 133
Query: 211 SQPTLATEAMGAGFYTLNISAFNGSLAINSGIVQASVTQTVFDEKPVSIFGISRVLLPKE 270
S P G Y+L + +G++ I+S + V+ +VF PV+++ ++RVLLP+
Sbjct: 134 SGPV---STFAGGQYSLKFTDVSGTVRIDSLWTRTKVSSSVFSTDPVAVYQVNRVLLPEA 190
Query: 271 IFGKN 275
IFG +
Sbjct: 191 IFGTD 195
>AT2G04780.1 | Symbols: FLA7 | FASCICLIN-like arabinoogalactan 7 |
chr2:1677488-1678252 FORWARD LENGTH=254
Length = 254
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 151 ESDEGGAGITLFVPVDDAFADLPASISLQSLPADKKAVVLRFHVLHSYYPLGSLQSITNP 210
+++ GIT+FVP DDAF + L +L D+ ++ FH L YY L ++++
Sbjct: 76 QANNTEEGITIFVPKDDAF-KAQKNPPLSNLTKDQLKQLVLFHALPHYYSLSEFKNLSQ- 133
Query: 211 SQPTLATEAMGAGFYTLNISAFNGSLAINSGIVQASVTQTVFDEKPVSIFGISRVLLPKE 270
S P G Y+L + +G++ I+S + V+ +VF PV+++ ++RVLLP+
Sbjct: 134 SGPV---STFAGGQYSLKFTDVSGTVRIDSLWTRTKVSSSVFSTDPVAVYQVNRVLLPEA 190
Query: 271 IFGKN 275
IFG +
Sbjct: 191 IFGTD 195
>AT5G55730.2 | Symbols: FLA1 | FASCICLIN-like arabinogalactan 1 |
chr5:22558375-22560392 REVERSE LENGTH=424
Length = 424
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 9/128 (7%)
Query: 151 ESDEGGAGITLFVPVDDAFAD-LPASISLQSLPADKKAVVLRFHVLHSYYPLGSLQSITN 209
ES EGG +T+F P DDA LP ++L A KK L F + +YY + L+S
Sbjct: 215 ESLEGG--MTVFCPGDDAMKGFLP---KYKNLTAPKKEAFLDFLAVPTYYSMAMLKSNNG 269
Query: 210 PSQPTLATEAMGAGFYTLNISAFNGSLAINSGIVQASVTQTVFDEKPVSIFGISRVLLPK 269
P TLAT+ GA + L + + + + I + T+ DE+P++I+ +VLLPK
Sbjct: 270 PMN-TLATD--GANKFELTVQNDGEKVTLKTRINTVKIVDTLIDEQPLAIYATDKVLLPK 326
Query: 270 EIFGKNPI 277
E+F + +
Sbjct: 327 ELFKASAV 334
>AT5G55730.1 | Symbols: FLA1 | FASCICLIN-like arabinogalactan 1 |
chr5:22558375-22560392 REVERSE LENGTH=424
Length = 424
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 9/128 (7%)
Query: 151 ESDEGGAGITLFVPVDDAFAD-LPASISLQSLPADKKAVVLRFHVLHSYYPLGSLQSITN 209
ES EGG +T+F P DDA LP ++L A KK L F + +YY + L+S
Sbjct: 215 ESLEGG--MTVFCPGDDAMKGFLP---KYKNLTAPKKEAFLDFLAVPTYYSMAMLKSNNG 269
Query: 210 PSQPTLATEAMGAGFYTLNISAFNGSLAINSGIVQASVTQTVFDEKPVSIFGISRVLLPK 269
P TLAT+ GA + L + + + + I + T+ DE+P++I+ +VLLPK
Sbjct: 270 PMN-TLATD--GANKFELTVQNDGEKVTLKTRINTVKIVDTLIDEQPLAIYATDKVLLPK 326
Query: 270 EIFGKNPI 277
E+F + +
Sbjct: 327 ELFKASAV 334
>AT4G12730.1 | Symbols: FLA2 | FASCICLIN-like arabinogalactan 2 |
chr4:7491598-7492809 REVERSE LENGTH=403
Length = 403
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
Query: 153 DEGGAGITLFVPVDDAFAD-LPASISLQSLPADKKAVVLRFHVLHSYYPLGSLQSITNPS 211
D G+T+F P D A +P SL PA+K A+VL +H + Y L L+S N +
Sbjct: 218 DTVDGGLTVFCPSDSAVGKFMPKFKSLS--PANKTALVL-YHGMPVYQSLQMLRS-GNGA 273
Query: 212 QPTLATEAMGAGFYTLNISAFNGSLAINSGIVQASVTQTVFDEKPVSIFGISRVLLPKEI 271
TLATE G + + + + + +V A V T+ D++P+ ++ I +VLLP+EI
Sbjct: 274 VNTLATE--GNNKFDFTVQNDGEDVTLETDVVTAKVMGTLKDQEPLIVYKIDKVLLPREI 331
Query: 272 F 272
+
Sbjct: 332 Y 332