Miyakogusa Predicted Gene

Lj6g3v1412680.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1412680.1 Non Chatacterized Hit- tr|I3T085|I3T085_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.3,0,UNCHARACTERIZED,NULL; no description,NULL;
S-adenosyl-L-methionine-dependent methyltransferases,NULL,CUFF.59542.1
         (143 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G17365.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   194   2e-50
AT3G17365.2 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   156   4e-39
AT3G60910.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   132   9e-32
AT4G34360.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    53   7e-08
AT2G31740.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    46   9e-06

>AT3G17365.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr3:5947144-5948766 REVERSE LENGTH=239
          Length = 239

 Score =  194 bits (493), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 96/145 (66%), Positives = 108/145 (74%), Gaps = 4/145 (2%)

Query: 1   MAT--GTQAYGESWYWDNRYTNEPGPFDWYQKYITLAPIINLYVPQ-NHSILVVGSGNSA 57
           MAT   TQ+Y E WYWD+RY NE  PFDWYQKY  LAP+INLYVPQ N  +LV+G GNSA
Sbjct: 1   MATEAPTQSYSEQWYWDDRYKNESEPFDWYQKYSPLAPLINLYVPQRNQRVLVIGCGNSA 60

Query: 58  FSEGLVDEGGYXXXXXXXXXXXXXEAMQNKYKDRPQLKYVKMDVRDMSAFESGSFGSVID 117
           FSEG+VD+G Y             + M  KY DRPQLKY+KMDVRDM AFE  SF +VID
Sbjct: 61  FSEGMVDDG-YEDVVSIDISSVVIDTMIKKYSDRPQLKYLKMDVRDMKAFEDASFDAVID 119

Query: 118 KGTLDSILCGSNSRQNATEMLEEVW 142
           KGTLDSILCGSNSRQ +T+MLEEVW
Sbjct: 120 KGTLDSILCGSNSRQYSTQMLEEVW 144


>AT3G17365.2 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr3:5947144-5948766 REVERSE LENGTH=277
          Length = 277

 Score =  156 bits (395), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 78/128 (60%), Positives = 89/128 (69%), Gaps = 4/128 (3%)

Query: 1   MAT--GTQAYGESWYWDNRYTNEPGPFDWYQKYITLAPIINLYVPQ-NHSILVVGSGNSA 57
           MAT   TQ+Y E WYWD+RY NE  PFDWYQKY  LAP+INLYVPQ N  +LV+G GNSA
Sbjct: 1   MATEAPTQSYSEQWYWDDRYKNESEPFDWYQKYSPLAPLINLYVPQRNQRVLVIGCGNSA 60

Query: 58  FSEGLVDEGGYXXXXXXXXXXXXXEAMQNKYKDRPQLKYVKMDVRDMSAFESGSFGSVID 117
           FSEG+VD+ GY             + M  KY DRPQLKY+KMDVRDM AFE  SF +VID
Sbjct: 61  FSEGMVDD-GYEDVVSIDISSVVIDTMIKKYSDRPQLKYLKMDVRDMKAFEDASFDAVID 119

Query: 118 KGTLDSIL 125
           KG L + L
Sbjct: 120 KGVLTTCL 127


>AT3G60910.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr3:22501727-22503182 FORWARD LENGTH=252
          Length = 252

 Score =  132 bits (332), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 65/140 (46%), Positives = 87/140 (62%), Gaps = 1/140 (0%)

Query: 2   ATGTQAYGESWYWDNRYTNEPGPFDWYQKYITLAPIINLYVPQNHSILVVGSGNSAFSEG 61
           +  T  YG++ YWD RY  +   FDWYQ Y +L P +  +V  +  +L+VG GNS  SE 
Sbjct: 7   SCNTYNYGDALYWDARYVQDALSFDWYQCYSSLRPFVRSFVSTSSRVLMVGCGNSLMSED 66

Query: 62  LVDEGGYXXXXXXXXXXXXXEAMQNKYKDRPQLKYVKMDVRDMSAFESGSFGSVIDKGTL 121
           +V +G Y             E MQ KY   PQLKY++MDVRDMS FE  SF ++IDKGTL
Sbjct: 67  MVKDG-YEDIMNVDISSVAIEMMQTKYASVPQLKYMQMDVRDMSYFEDDSFDTIIDKGTL 125

Query: 122 DSILCGSNSRQNATEMLEEV 141
           DS++CGS++  +A+ ML EV
Sbjct: 126 DSLMCGSDALLSASRMLGEV 145


>AT4G34360.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr4:16432011-16433752 FORWARD LENGTH=248
          Length = 248

 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 5/121 (4%)

Query: 7   AYGESWYWDNRYTNEPGPFDWYQKYITLAPIINLYVPQNHSILVVGSGNSAFSEGLVDEG 66
            Y +  YWD R+++E   ++W++ Y     +I   +  + S+L +G GNS   E L  + 
Sbjct: 14  TYLDPHYWDERFSSEEH-YEWFKDYSHFQHLIISNIKPSSSVLELGCGNSQLCEELY-KD 71

Query: 67  GYXXXXXXXXXXXXXEAMQNKY--KDRPQLKYVKMDVRDMSAFESGSFGSVIDKGTLDSI 124
           G              E MQ++   K   ++K V+ D+ D+  F+S SF  VI+KGT+D +
Sbjct: 72  GIVDITCIDLSSVAVEKMQSRLLPKGYKEIKVVQADMLDL-PFDSESFDVVIEKGTMDVL 130

Query: 125 L 125
            
Sbjct: 131 F 131


>AT2G31740.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr2:13491053-13495009 REVERSE LENGTH=760
          Length = 760

 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)

Query: 48  ILVVGSGNSAFSEGLVDEGGYXXXXXXXXXXXXXEAMQNKYKDRPQLKYVKMDVRDMSAF 107
           ILV G GNS  +E L D G               + ++   + RP+L++  MD+  M   
Sbjct: 72  ILVPGCGNSRLTEHLYDAGFRDITNVDFSKVVISDMLRRNIRTRPELRWRVMDITKMQLA 131

Query: 108 ESGSFGSVIDKGTLDSIL 125
           +  SF +V+DKG LD+++
Sbjct: 132 DE-SFDTVLDKGALDALM 148