Miyakogusa Predicted Gene

Lj6g3v1392570.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1392570.1 tr|A9VBI3|A9VBI3_MONBE Predicted protein
OS=Monosiga brevicollis GN=29580 PE=4
SV=1,26.72,0.000000000000007,seg,NULL; Pectin lyase-like,Pectin lyase
fold/virulence factor; Beta_helix,NULL,gene.g66174.t1.1
         (358 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G20040.1 | Symbols:  | Pectin lyase-like superfamily protein ...   421   e-118
AT4G20050.2 | Symbols: QRT3 | Pectin lyase-like superfamily prot...   317   6e-87
AT4G20050.1 | Symbols: QRT3 | Pectin lyase-like superfamily prot...   317   6e-87

>AT4G20040.1 | Symbols:  | Pectin lyase-like superfamily protein |
           chr4:10847348-10848963 REVERSE LENGTH=483
          Length = 483

 Score =  421 bits (1081), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 209/319 (65%), Positives = 257/319 (80%), Gaps = 12/319 (3%)

Query: 5   VQGGTLRASDKFPPDRHLVELSASNSHNLQEPAASIHRHHHHGFNSKKLQQNIGIYYEDI 64
           V+GGT RAS+ FP DRHLVEL ASN+   ++P   +       F+ +K  Q+ GI+YED+
Sbjct: 141 VKGGTFRASELFPGDRHLVELVASNA---KKP---MKMSPEESFSDQK-DQSSGIFYEDV 193

Query: 65  TFRDIFFDSSYRGGGILIVDSARVRITNCFFLHFTTEGIQVQRGHETYISSTFLGQHSTV 124
           TF+D+ FDS +RGGGIL++DSAR+RITNC+FLHFTT+GI+VQ GHETYIS++FLGQHSTV
Sbjct: 194 TFQDVLFDSRFRGGGILVIDSARIRITNCYFLHFTTQGIKVQGGHETYISNSFLGQHSTV 253

Query: 125 GGDKGEREFSGTAIDLASNDNAITDVSIFSAAIGIVLRGQANMITGVHCYNKATAFGGIG 184
           GGD+ ER F+GT ID++SNDNAITDV IFSA IGI L G ANM+TGVHCYNKAT FGGIG
Sbjct: 254 GGDREERGFTGTGIDISSNDNAITDVVIFSAGIGISLNGGANMVTGVHCYNKATWFGGIG 313

Query: 185 ILVKLAGYSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGGANIVLKSIKGKVSGLNIVD 244
           ILVK      TRIDNCY+DYTGIV+EDPV VHVTN  FLG ANIVL+S+ GK+SG+NIV+
Sbjct: 314 ILVK---SHLTRIDNCYLDYTGIVIEDPVHVHVTNALFLGDANIVLRSVHGKISGVNIVN 370

Query: 245 NMFSGKW-NQVPIVALDGQFSSIDQVVIDRNNVYGSMSLRSTVSKLTVAGNGSKWVADFS 303
           NMFSG   N  PIV L+G+F  I+QVVID+NN  G M L+ST  K  V+ NG++W+ADFS
Sbjct: 371 NMFSGTAKNNFPIVKLEGEFHDINQVVIDQNNAEG-MMLKSTTGKAMVSANGTRWIADFS 429

Query: 304 NVLVFPNRISHFQYSFYSQ 322
            VLVFPNRI+H+Q+SF++Q
Sbjct: 430 PVLVFPNRINHYQHSFFAQ 448


>AT4G20050.2 | Symbols: QRT3 | Pectin lyase-like superfamily protein
           | chr4:10849911-10852090 REVERSE LENGTH=481
          Length = 481

 Score =  317 bits (813), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 167/330 (50%), Positives = 218/330 (66%), Gaps = 30/330 (9%)

Query: 5   VQGGTLRASDKFPPDRHLVELSASNSHNLQEPAASIHRHHHHGFNSKKLQQNIGIYYEDI 64
           + GGTLRAS+ FP DR+L+EL   +S                     KLQ      +E I
Sbjct: 148 ISGGTLRASNDFPVDRYLIELKDESS---------------------KLQY----IFEYI 182

Query: 65  TFRDIFFDSSYRGGGILIVDSARVRITNCFFLHF-TTEGIQVQRGHETYISSTFLGQHST 123
           T RD+  D +YRGG I +++S R  I NC+   F  T GI V+ GHETYI ++FLGQH T
Sbjct: 183 TLRDLLIDCNYRGGAIAVINSLRTSIDNCYITRFGDTNGILVKSGHETYIRNSFLGQHIT 242

Query: 124 VGGDKGEREFSGTAIDLASNDNAITDVSIFSAAIGIVLRGQANMITGVHCYNKATAFGGI 183
            GGD+GER FSGTAI+L  NDNA+TD  IFSA IG+++ GQAN+++GVHCYNKAT FGG 
Sbjct: 243 AGGDRGERSFSGTAINLMGNDNAVTDTVIFSARIGVMVSGQANLLSGVHCYNKATGFGGT 302

Query: 184 GILVKLAGYSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGGANIVLKSIKGKVSGLNIV 243
           GI ++L G +Q RI N Y+DYTGIV EDPVQ+ ++  FFLG A I+LKSI G + G++IV
Sbjct: 303 GIYLRLPGLTQNRIVNSYLDYTGIVAEDPVQLQISGTFFLGDAFILLKSIAGYIRGVSIV 362

Query: 244 DNMFSGKWNQVPIVALDGQ---FSSIDQVVIDRNNVYGSMSLRSTVSKLTVAGNGSKWVA 300
           DNMFSG  + V IV LD +   F  + QVV+DRN+V G M  +STV++ +V GNG+ W  
Sbjct: 363 DNMFSGSGHGVQIVQLDQRNTAFDDVGQVVVDRNSVNG-MVEKSTVARGSVDGNGTSWTV 421

Query: 301 DFSNVLVFPNRISHFQYSFYSQGEPKFLAH 330
           DF+ VL+FP+ I+H QY+  +     F  H
Sbjct: 422 DFNPVLLFPDLINHVQYTLVASEAGVFPLH 451


>AT4G20050.1 | Symbols: QRT3 | Pectin lyase-like superfamily protein
           | chr4:10849911-10852090 REVERSE LENGTH=481
          Length = 481

 Score =  317 bits (813), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 167/330 (50%), Positives = 218/330 (66%), Gaps = 30/330 (9%)

Query: 5   VQGGTLRASDKFPPDRHLVELSASNSHNLQEPAASIHRHHHHGFNSKKLQQNIGIYYEDI 64
           + GGTLRAS+ FP DR+L+EL   +S                     KLQ      +E I
Sbjct: 148 ISGGTLRASNDFPVDRYLIELKDESS---------------------KLQY----IFEYI 182

Query: 65  TFRDIFFDSSYRGGGILIVDSARVRITNCFFLHF-TTEGIQVQRGHETYISSTFLGQHST 123
           T RD+  D +YRGG I +++S R  I NC+   F  T GI V+ GHETYI ++FLGQH T
Sbjct: 183 TLRDLLIDCNYRGGAIAVINSLRTSIDNCYITRFGDTNGILVKSGHETYIRNSFLGQHIT 242

Query: 124 VGGDKGEREFSGTAIDLASNDNAITDVSIFSAAIGIVLRGQANMITGVHCYNKATAFGGI 183
            GGD+GER FSGTAI+L  NDNA+TD  IFSA IG+++ GQAN+++GVHCYNKAT FGG 
Sbjct: 243 AGGDRGERSFSGTAINLMGNDNAVTDTVIFSARIGVMVSGQANLLSGVHCYNKATGFGGT 302

Query: 184 GILVKLAGYSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGGANIVLKSIKGKVSGLNIV 243
           GI ++L G +Q RI N Y+DYTGIV EDPVQ+ ++  FFLG A I+LKSI G + G++IV
Sbjct: 303 GIYLRLPGLTQNRIVNSYLDYTGIVAEDPVQLQISGTFFLGDAFILLKSIAGYIRGVSIV 362

Query: 244 DNMFSGKWNQVPIVALDGQ---FSSIDQVVIDRNNVYGSMSLRSTVSKLTVAGNGSKWVA 300
           DNMFSG  + V IV LD +   F  + QVV+DRN+V G M  +STV++ +V GNG+ W  
Sbjct: 363 DNMFSGSGHGVQIVQLDQRNTAFDDVGQVVVDRNSVNG-MVEKSTVARGSVDGNGTSWTV 421

Query: 301 DFSNVLVFPNRISHFQYSFYSQGEPKFLAH 330
           DF+ VL+FP+ I+H QY+  +     F  H
Sbjct: 422 DFNPVLLFPDLINHVQYTLVASEAGVFPLH 451