Miyakogusa Predicted Gene
- Lj6g3v1392470.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1392470.1 tr|G7INC5|G7INC5_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_2g0,76.77,0,coiled-coil,NULL; PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopept,CUFF.59450.1
(645 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 777 0.0
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 302 5e-82
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 273 2e-73
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 6e-69
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 1e-68
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 256 5e-68
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 8e-67
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 1e-65
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 2e-65
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 1e-64
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 5e-64
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 9e-63
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 9e-63
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 237 2e-62
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 236 3e-62
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 5e-62
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 8e-62
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 8e-62
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 2e-61
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 4e-61
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 1e-60
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 2e-60
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 229 7e-60
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 4e-59
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 5e-59
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 3e-58
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 3e-58
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 221 1e-57
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 5e-57
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 8e-57
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 1e-56
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 5e-56
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 2e-55
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 214 2e-55
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 4e-55
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 3e-54
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 209 5e-54
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 1e-53
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 1e-53
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 207 2e-53
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 206 5e-53
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 5e-53
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 205 7e-53
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 204 2e-52
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 2e-52
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 2e-51
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 200 2e-51
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 3e-51
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 200 3e-51
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 1e-50
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 2e-49
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 2e-49
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 194 2e-49
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 193 2e-49
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 193 3e-49
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 3e-49
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 2e-48
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 190 3e-48
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 3e-48
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 189 4e-48
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 6e-47
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 8e-47
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 185 1e-46
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 4e-46
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 6e-46
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 6e-46
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 2e-45
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 181 2e-45
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 3e-45
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 3e-45
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 3e-45
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 1e-44
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 1e-44
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 1e-44
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 3e-44
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 3e-44
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 3e-44
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 7e-44
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 9e-44
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 5e-43
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 6e-43
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 3e-42
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 169 5e-42
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 6e-42
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 2e-41
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 3e-41
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 4e-41
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 4e-41
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 166 4e-41
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 4e-41
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 7e-41
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 165 1e-40
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 164 2e-40
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 163 4e-40
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 161 1e-39
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 161 2e-39
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 3e-39
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 6e-39
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 1e-38
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 3e-37
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 7e-36
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 1e-35
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 147 3e-35
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 145 6e-35
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 1e-34
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 2e-33
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 2e-33
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 2e-33
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 7e-33
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 9e-33
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 137 2e-32
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 3e-32
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 5e-32
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 7e-31
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 8e-31
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 8e-31
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 8e-31
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 1e-30
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 1e-30
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 1e-30
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 3e-30
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 4e-30
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 5e-30
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 127 2e-29
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 4e-29
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 5e-29
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 7e-29
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 125 7e-29
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 7e-29
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 1e-28
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 123 4e-28
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 123 4e-28
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 4e-28
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 1e-27
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 121 1e-27
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 2e-27
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 120 4e-27
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 119 9e-27
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 6e-26
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 8e-26
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 2e-25
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 5e-25
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 7e-24
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 2e-23
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-23
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-23
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 107 3e-23
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 6e-23
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 105 1e-22
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 103 3e-22
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 103 4e-22
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 5e-22
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 103 5e-22
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 99 1e-20
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 98 2e-20
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 97 3e-20
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 5e-20
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 97 5e-20
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 96 6e-20
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 96 7e-20
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 93 6e-19
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 93 7e-19
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 7e-19
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 92 1e-18
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 91 2e-18
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 90 5e-18
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 8e-18
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 88 2e-17
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 87 2e-17
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 5e-17
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 86 7e-17
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 86 8e-17
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 86 9e-17
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 85 1e-16
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 85 2e-16
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 2e-16
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 82 1e-15
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 3e-15
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 80 6e-15
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 7e-15
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 8e-15
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 79 8e-15
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 78 2e-14
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 6e-14
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 9e-14
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 75 1e-13
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 75 1e-13
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 75 2e-13
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 74 2e-13
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 74 3e-13
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 74 4e-13
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 74 4e-13
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-13
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-13
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 5e-13
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 73 5e-13
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 73 5e-13
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 8e-13
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 72 1e-12
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 5e-12
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 5e-12
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-12
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 70 7e-12
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 67 3e-11
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 63 7e-10
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-09
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 60 3e-09
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 60 3e-09
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 60 5e-09
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 58 2e-08
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT3G60980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 9e-07
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 9e-07
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 51 3e-06
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 51 3e-06
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 51 3e-06
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/599 (62%), Positives = 463/599 (77%), Gaps = 5/599 (0%)
Query: 50 EIFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFK 109
++FKS K GS+KLGD + S+IE A S DF S+E+LL +++ E RV IE++FIV+F+
Sbjct: 62 KMFKSAP-KMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFR 120
Query: 110 AYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKS--- 166
AYGKAH P+KAV+LFHRM EF CK++VKSFNSVLNVII EG +HR LEFY +V S
Sbjct: 121 AYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMN 180
Query: 167 LNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDE 226
+NI PNGL+FNLVIKALCK+ VD+A+EVFRG+ R C PD YTY TLMDGLCKE RIDE
Sbjct: 181 MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 227 AVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVD 286
AV LLDEMQ EG P+P ++NVLI LCKKGDL R KLVDNM LKGCVPNEVTYNTL+
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIH 300
Query: 287 GLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRG 346
GLC KGKL+KAVSLL +MV++KC+PNDVT+GTL++G VKQ RA+D +L S+EERG+
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL 360
Query: 347 NEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYL 406
N++IYS LISGLFKEGK E AM LW++M EKGC+PN VVYS L+DGLCREGK +EA+E L
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Query: 407 IEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKN 466
M G LPN++TYSSLM+GFF+ G C +A+ VWKEM C+ N+ CYS+LI+GLC
Sbjct: 421 NRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGV 480
Query: 467 GKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQ-EAELQPDV 525
G++ EAMMVW +ML+ GIK D VAYSS+I G C +D +KL+++MLCQ E + QPDV
Sbjct: 481 GRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDV 540
Query: 526 ATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLD 585
TYNILL+ Q +ISRA+D+LN MLD+GCDPD ITC+ FL TL + N GR FL+
Sbjct: 541 VTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLE 600
Query: 586 ELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAISECWSRLC 644
ELVVRL+KRQR GA I+EVML + L P+ STWA++V+++CKP+ I AI +CW LC
Sbjct: 601 ELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAIDKCWRNLC 659
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 178/521 (34%), Positives = 283/521 (54%), Gaps = 11/521 (2%)
Query: 72 LIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEF 131
LI KL A+ +F +++ LL QMK E VF E FI I + Y KA FP + L M +
Sbjct: 117 LIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVY 176
Query: 132 HCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQ 191
C+ T KS+N VL +++ G+ H+ + S I P TF +V+KA C V +D
Sbjct: 177 SCEPTFKSYNVVLEILVS-GNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235
Query: 192 AVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLIS 251
A+ + R + C P+S Y TL+ L K R++EA+ LL+EM + G P+ FN +I
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295
Query: 252 ALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVP 311
LCK + AAK+V+ M ++G P+++TY L++GLC+ G+++ A L ++ P
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----P 351
Query: 312 NDVTFGTLVHGFVKQGRASDGASVLISL-EERGHRGNEYIYSSLISGLFKEGKFEHAMQL 370
V F TL+HGFV GR D +VL + G + Y+SLI G +KEG A+++
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 371 WKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFE 430
+M KGC+PN Y+ L+DG C+ GK DEA L EM G PN+ ++ L+ F +
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471
Query: 431 AGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVA 490
+A+ +++EM C + ++ LI+GLC+ ++ A+ + + M+S G+ + V
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 491 YSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNI 550
Y+++I+ F + + KL N+M+ Q + L D TYN L+ + + +A +
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPL--DEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 551 MLDQGCDPDFITCDIFLKTL-RDNMNPPQDGREFLDELVVR 590
ML G P I+C+I + L R M ++ EF E+V+R
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGM--VEEAVEFQKEMVLR 628
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/507 (29%), Positives = 271/507 (53%), Gaps = 13/507 (2%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
+F +++ A ++ S LL+ M + V + + + K + +A+ L
Sbjct: 218 FTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEE 277
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSL--NIQPNGLTFNLVIKALC 184
M C ++FN +VI+ F R E V + L P+ +T+ ++ LC
Sbjct: 278 MFL-MGCVPDAETFN---DVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333
Query: 185 KVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE-GTFPNP 243
K+G VD A ++F I P+ ++TL+ G GR+D+A ++L +M G P+
Sbjct: 334 KIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV 389
Query: 244 FVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQ 303
+N LI K+G + A +++ +M KGC PN +Y LVDG C+ GK+++A ++LN+
Sbjct: 390 CTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNE 449
Query: 304 MVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGK 363
M A+ PN V F L+ F K+ R + + + +G + + Y ++SLISGL + +
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 364 FEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSS 423
+HA+ L ++M+ +G NTV Y+ LI+ R G+ EAR+ + EM +G + TY+S
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569
Query: 424 LMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRG 483
L++G AG+ KA ++++M + + + +ILINGLC++G + EA+ K+M+ RG
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Query: 484 IKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISR 543
D+V ++S+I+G C A ++ G+ +F ++ Q + PD T+N L++ + +
Sbjct: 630 STPDIVTFNSLINGLCRAGRIEDGLTMFRKL--QAEGIPPDTVTFNTLMSWLCKGGFVYD 687
Query: 544 AMDVLNIMLDQGCDPDFITCDIFLKTL 570
A +L+ ++ G P+ T I L+++
Sbjct: 688 ACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 214/389 (55%), Gaps = 5/389 (1%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+ A +LF+R+ K + FN++++ + G A S + S I P+ T+N
Sbjct: 339 DAAKDLFYRIP-----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 393
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
+I K GLV A+EV + + C P+ Y+Y+ L+DG CK G+IDEA ++L+EM +
Sbjct: 394 SLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD 453
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G PN FN LISA CK+ + A ++ M KGC P+ T+N+L+ GLC ++ A
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
+ LL M++ V N VT+ TL++ F+++G + ++ + +G +E Y+SLI G
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKG 573
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
L + G+ + A L+++M+ G P+ + + LI+GLCR G +EA E+ EM +G P+
Sbjct: 574 LCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 633
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
T++SL+ G AG + ++++++ + V ++ L++ LCK G + +A ++
Sbjct: 634 IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLD 693
Query: 478 QMLSRGIKLDVVAYSSMIHGFCNAQLVDQ 506
+ + G + +S ++ + +D+
Sbjct: 694 EGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 155/331 (46%), Gaps = 37/331 (11%)
Query: 110 AYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNI 169
Y K A+ + H M + CK V S+ +++ + G A + + +
Sbjct: 398 GYWKEGLVGLALEVLHDMRNK-GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD-GL 455
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVS 229
+PN + FN +I A CK + +AVE+FR + + C PD YT+++L+ GLC+ I A+
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 230 LLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV---- 285
LL +M EG N +N LI+A ++G++ A KLV+ M +G +E+TYN+L+
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575
Query: 286 -------------------------------DGLCRKGKLNKAVSLLNQMVANKCVPNDV 314
+GLCR G + +AV +MV P+ V
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635
Query: 315 TFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEM 374
TF +L++G + GR DG ++ L+ G + +++L+S L K G A L E
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEG 695
Query: 375 MEKGCEPNTVVYSALIDGLCREGKADEAREY 405
+E G PN +S L+ + + D R Y
Sbjct: 696 IEDGFVPNHRTWSILLQSIIPQETLDRRRFY 726
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 111/230 (48%), Gaps = 37/230 (16%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
+++ +LI + +L+ +M + E + + K +A +KA +LF +
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
M +++GH P+ ++ N++I LC+
Sbjct: 590 M--------------------LRDGH-----------------APSNISCNILINGLCRS 612
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
G+V++AVE + + LR PD T+++L++GLC+ GRI++ +++ ++Q EG P+ F
Sbjct: 613 GMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTF 672
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNK 296
N L+S LCK G + A L+D G VPN T++ L+ + + L++
Sbjct: 673 NTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 103/223 (46%), Gaps = 3/223 (1%)
Query: 341 ERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
+ G+R + +Y LI L G+F+ +L +M ++G ++ +++ + G
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPG 163
Query: 401 EAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHK-AILVWKEMKNNSCNHNEVCYSIL 459
+ ++EM+N +F +++ +G+CHK A V+ +M + + ++
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 223
Query: 460 INGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEA 519
+ C ++ A+ + + M G + V Y ++IH V++ ++L +M
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
Query: 520 ELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
PD T+N ++ + + I+ A ++N ML +G PD IT
Sbjct: 284 --VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDIT 324
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/541 (29%), Positives = 294/541 (54%), Gaps = 23/541 (4%)
Query: 104 FIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHV 163
F ++ K+Y + +KA+++ H +A V S+N+VL+ I+ R + F +V
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPG-VLSYNAVLDATIRS---KRNISFAENV 192
Query: 164 CKSL---NIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCK 220
K + + PN T+N++I+ C G +D A+ +F + + C P+ TY+TL+DG CK
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 221 EGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVT 280
+ID+ LL M ++G PN +NV+I+ LC++G + + ++ M+ +G +EVT
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 281 YNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLE 340
YNTL+ G C++G ++A+ + +M+ + P+ +T+ +L+H K G + L +
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 341 ERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
RG NE Y++L+ G ++G A ++ +EM + G P+ V Y+ALI+G C GK +
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 401 EAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILI 460
+A L +MK KG P+ +YS+++ GF + D +A+ V +EM + + YS LI
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 461 NGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAE 520
G C+ + EA ++++ML G+ D Y+++I+ +C +++ ++L N+M+ E
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV--EKG 550
Query: 521 LQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDG 580
+ PDV TY++L+N +Q+ A +L + + P D+ TL +N +
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPS----DVTYHTLIENCS----N 602
Query: 581 REFLDELVVRLVK----RQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
EF + VV L+K + A ++ E ML + P+ + + I++ C+ +IRKA
Sbjct: 603 IEF--KSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAY 660
Query: 637 S 637
+
Sbjct: 661 T 661
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 139/466 (29%), Positives = 243/466 (52%), Gaps = 19/466 (4%)
Query: 120 AVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLV 179
A+ LF +ME + C V ++N++++ + + + ++PN +++N+V
Sbjct: 224 ALTLFDKMETK-GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK-GLEPNLISYNVV 281
Query: 180 IKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGT 239
I LC+ G + + V ++ R + D TY+TL+ G CKEG +A+ + EM G
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Query: 240 FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVS 299
P+ + LI ++CK G++ RA + +D M ++G PNE TY TLVDG +KG +N+A
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 300 LLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
+L +M N P+ VT+ L++G G+ D +VL ++E+G + YS+++SG
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 360 KEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSF 419
+ + A+++ +EM+EKG +P+T+ YS+LI G C + + EA + EM G P+ F
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 420 TYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEA-MMVWKQ 478
TY++L+ + GD KA+ + EM + V YS+LINGL K + EA ++ K
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Query: 479 MLSRGIKLDVVAYS--------------SMIHGFCNAQLVDQGMKLFNQMLCQEAELQPD 524
+ DV ++ S+I GFC ++ + ++F ML + +PD
Sbjct: 582 FYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH--KPD 639
Query: 525 VATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
YNI+++ + +I +A + M+ G +T +K L
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKAL 685
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 210/434 (48%), Gaps = 24/434 (5%)
Query: 204 CAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAA 263
C S + ++ + ID+A+S++ Q G P +N ++ A + I A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 264 KLVDNMSLKGCV-PNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHG 322
+ V L+ V PN TYN L+ G C G ++ A++L ++M C+PN VT+ TL+ G
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249
Query: 323 FVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPN 382
+ K + DG +L S+ +G N Y+ +I+GL +EG+ + + EM +G +
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLD 309
Query: 383 TVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWK 442
V Y+ LI G C+EG +A EM G P+ TY+SL+ +AG+ ++A+
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 443 EMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQ 502
+M+ NE Y+ L++G + G + EA V ++M G VV Y+++I+G C
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 503 LVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
++ + + M +E L PDV +Y+ +L+ F + ++ A+ V M+++G PD IT
Sbjct: 430 KMEDAIAVLEDM--KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 563 CDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIV 622
L+ +++RT A + E ML L P+ T+ +
Sbjct: 488 ---------------------YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 623 VQQLCKPRNIRKAI 636
+ C ++ KA+
Sbjct: 527 INAYCMEGDLEKAL 540
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 188/383 (49%), Gaps = 51/383 (13%)
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRG 198
++N+++ +EG+FH+AL ++ + + + P+ +T+ +I ++CK G +++A+E
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRH-GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 199 IHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGD 258
+ +R P+ TY+TL+DG ++G ++EA +L EM G P+ +N LI+ C G
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 259 LIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
+ A ++++M KG P+ V+Y+T++ G CR +++A+ + +MV P+ +T+ +
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 319 LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG 378
L+ GF +Q R + + + G +E+ Y++LI+ EG E A+QL EM+EKG
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 379 CEPNTVVYSALIDGL--------------------------------------------- 393
P+ V YS LI+GL
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 394 -----CREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNS 448
C +G EA + M K H P+ Y+ ++ G AGD KA ++KEM +
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 449 CNHNEVCYSILINGLCKNGKLME 471
+ V L+ L K GK+ E
Sbjct: 671 FLLHTVTVIALVKALHKEGKVNE 693
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 177/358 (49%), Gaps = 17/358 (4%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
+++ SLI + + + E L QM+ E+ + + + + + +A +
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
M V ++N+++N G A+ + K + P+ ++++ V+ C+
Sbjct: 406 MNDNGFSPSVV-TYNALINGHCVTGKMEDAIAVLEDM-KEKGLSPDVVSYSTVLSGFCRS 463
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
VD+A+ V R + + PD+ TYS+L+ G C++ R EA L +EM G P+ F +
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA 306
LI+A C +GDL +A +L + M KG +P+ VTY+ L++GL ++ + +A LL ++
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 307 NKCVPNDVTFGTLVH---------------GFVKQGRASDGASVLISLEERGHRGNEYIY 351
+ VP+DVT+ TL+ GF +G ++ V S+ + H+ + Y
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAY 643
Query: 352 SSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
+ +I G + G A L+KEM++ G +TV AL+ L +EGK +E ++ +
Sbjct: 644 NIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHV 701
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 122/261 (46%), Gaps = 16/261 (6%)
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRG 198
+++S++ ++ A + Y + + + + P+ T+ +I A C G +++A+++
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLR-VGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 199 IHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLIS------- 251
+ + PD TYS L++GL K+ R EA LL ++ E + P+ ++ LI
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF 605
Query: 252 --------ALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQ 303
C KG + A ++ ++M K P+ YN ++ G CR G + KA +L +
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKE 665
Query: 304 MVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGK 363
MV + + + VT LV K+G+ ++ SV++ + L+ +EG
Sbjct: 666 MVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGN 725
Query: 364 FEHAMQLWKEMMEKGCEPNTV 384
+ + + EM + G PN +
Sbjct: 726 MDVVLDVLAEMAKDGFLPNGI 746
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 259 bits (661), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 178/603 (29%), Positives = 299/603 (49%), Gaps = 73/603 (12%)
Query: 62 YKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAV 121
+K L+F +I KLA S++ LLQQMK + E FI + Y + E+AV
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 122 NLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIK 181
+F+R++ EF C +VK +N VL+ ++ E Y + K +PN T+N+++K
Sbjct: 132 EMFYRIK-EFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDM-KRDGFEPNVFTYNVLLK 189
Query: 182 ALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFP 241
ALCK VD A ++ + + C PD+ +Y+T++ +C+ G + E L + + P
Sbjct: 190 ALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----P 244
Query: 242 NPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLL 301
V+N LI+ LCK+ D A +L+ M KG PN ++Y+TL++ LC G++ A S L
Sbjct: 245 VVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFL 304
Query: 302 NQMVANKC------------------------------------VPNDVTFGTLVHGFVK 325
QM+ C PN V + TLV GF
Sbjct: 305 TQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCS 364
Query: 326 QGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVV 385
G SV +EE G N Y SLI+G K G + A+ +W +M+ GC PN VV
Sbjct: 365 HGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVV 424
Query: 386 YSALIDGLCREGKADEAREYLIEMKNKGH-LPNSFTYSSLMRGFFEAGDCHKAILVWKEM 444
Y+ +++ LCR K EA E LIE+ +K + P+ T+++ ++G +AG A V+++M
Sbjct: 425 YTNMVEALCRHSKFKEA-ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Query: 445 -KNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQL 503
+ + C N V Y+ L++GL K ++ EA + +++ RG++ Y++++HG CNA L
Sbjct: 484 EQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGL 543
Query: 504 VDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIML--DQGCDPDFI 561
++L +M+ PD T N+++ A+ +Q RA +L+++ + PD I
Sbjct: 544 PGIALQLVGKMMVDGK--SPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVI 601
Query: 562 T-CDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWA 620
+ ++ R N +DG V L++R + G ++P +TW+
Sbjct: 602 SYTNVIWGLCRSNCR--EDG--------VILLERMISAG------------IVPSIATWS 639
Query: 621 IVV 623
+++
Sbjct: 640 VLI 642
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 225/455 (49%), Gaps = 28/455 (6%)
Query: 149 QEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLR--NCAP 206
QE AL F+ + S + LTF ++I+ L G VD + + + L+ +C+
Sbjct: 52 QESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSE 111
Query: 207 DSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV 266
D + +++ + G + AV + ++ G P+ ++N ++ L + + +
Sbjct: 112 DLFI--SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVY 169
Query: 267 DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVH----- 321
+M G PN TYN L+ LC+ K++ A LL +M C P+ V++ T++
Sbjct: 170 RDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEV 229
Query: 322 GFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEP 381
G VK+GR L ER +Y++LI+GL KE ++ A +L +EM+EKG P
Sbjct: 230 GLVKEGR---------ELAER-FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISP 279
Query: 382 NTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVW 441
N + YS LI+ LC G+ + A +L +M +G PN +T SSL++G F G A+ +W
Sbjct: 280 NVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLW 339
Query: 442 KEM-KNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCN 500
+M + N V Y+ L+ G C +G +++A+ V+ M G ++ Y S+I+GF
Sbjct: 340 NQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAK 399
Query: 501 AQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDF 560
+D + ++N+ML + P+V Y ++ A + + A ++ IM + C P
Sbjct: 400 RGSLDGAVYIWNKML--TSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSV 457
Query: 561 ITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQ 595
T + F+K L D GR E V R +++Q
Sbjct: 458 PTFNAFIKGLCD------AGRLDWAEKVFRQMEQQ 486
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 166/332 (50%), Gaps = 3/332 (0%)
Query: 133 CKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQA 192
C + + +S++ G AL+ ++ + + +QPN + +N +++ C G + +A
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKA 371
Query: 193 VEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISA 252
V VF + C+P+ TY +L++G K G +D AV + ++M G PN V+ ++ A
Sbjct: 372 VSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEA 431
Query: 253 LCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM-VANKCVP 311
LC+ A L++ MS + C P+ T+N + GLC G+L+ A + QM ++C P
Sbjct: 432 LCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPP 491
Query: 312 NDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLW 371
N VT+ L+ G K R + + + RG + Y++L+ G G A+QL
Sbjct: 492 NIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLV 551
Query: 372 KEMMEKGCEPNTVVYSALIDGLCREGKADEAREY--LIEMKNKGHLPNSFTYSSLMRGFF 429
+MM G P+ + + +I C++GKA+ A + L+ + P+ +Y++++ G
Sbjct: 552 GKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLC 611
Query: 430 EAGDCHKAILVWKEMKNNSCNHNEVCYSILIN 461
+ +++ + M + + +S+LIN
Sbjct: 612 RSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 208/456 (45%), Gaps = 40/456 (8%)
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDS-YTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
V+K L + V A+ F+ I N + T+ ++ L +G++D LL +M+++
Sbjct: 46 VVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQ 105
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G + +F +IS + G RA ++ + GC P+ YN ++D L + ++
Sbjct: 106 GFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMI 165
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLIS- 356
+ M + PN T+ L+ K + +L+ + +G + Y+++IS
Sbjct: 166 YMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISS 225
Query: 357 ----GLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK 412
GL KEG+ E+ E+ EP VY+ALI+GLC+E A E + EM K
Sbjct: 226 MCEVGLVKEGR---------ELAER-FEPVVSVYNALINGLCKEHDYKGAFELMREMVEK 275
Query: 413 GHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEA 472
G PN +YS+L+ +G A +M C+ N S L+ G G +A
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
Query: 473 MMVWKQMLSR-GIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNIL 531
+ +W QM+ G++ +VVAY++++ GFC+ + + + +F+ M +E P++ TY L
Sbjct: 336 LDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHM--EEIGCSPNIRTYGSL 393
Query: 532 LNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRL 591
+N F ++ ++ A+ + N ML GC P+ + +V L
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVV---------------------YTNMVEAL 432
Query: 592 VKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLC 627
+ + A +IE+M P T+ ++ LC
Sbjct: 433 CRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLC 468
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 166/390 (42%), Gaps = 54/390 (13%)
Query: 279 VTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLIS 338
+T+ ++ L G+++ LL QM ++ F +++ + + G A +
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 339 LEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGK 398
++E G + IY+ ++ L E + + ++++M G EPN Y+ L+ LC+ K
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 399 ADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAG-------------------------- 432
D A++ L+EM NKG P++ +Y++++ E G
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGL 256
Query: 433 ----DCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
D A + +EM + N + YS LIN LC +G++ A QML RG ++
Sbjct: 257 CKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNI 316
Query: 489 VAYSSMIHG-FCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDV 547
SS++ G F D + L+NQM+ + LQP+V YN L+ F NI +A+ V
Sbjct: 317 YTLSSLVKGCFLRGTTFD-ALDLWNQMI-RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSV 374
Query: 548 LNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVM 607
+ M + GC P+ T L+ KR GA I M
Sbjct: 375 FSHMEEIGCSPNIRT---------------------YGSLINGFAKRGSLDGAVYIWNKM 413
Query: 608 LDRCLLPEASTWAIVVQQLCKPRNIRKAIS 637
L P + +V+ LC+ ++A S
Sbjct: 414 LTSGCCPNVVVYTNMVEALCRHSKFKEAES 443
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 110/209 (52%), Gaps = 3/209 (1%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
++A +L M E +C +V +FN+ + + G A + + + + PN +T+N
Sbjct: 439 KEAESLIEIMSKE-NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYN 497
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
++ L K +++A + R I +R S TY+TL+ G C G A+ L+ +M ++
Sbjct: 498 ELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVD 557
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSL--KGCVPNEVTYNTLVDGLCRKGKLN 295
G P+ N++I A CK+G RAA+++D +S + P+ ++Y ++ GLCR
Sbjct: 558 GKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCRE 617
Query: 296 KAVSLLNQMVANKCVPNDVTFGTLVHGFV 324
V LL +M++ VP+ T+ L++ F+
Sbjct: 618 DGVILLERMISAGIVPSIATWSVLINCFI 646
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 163/589 (27%), Positives = 295/589 (50%), Gaps = 27/589 (4%)
Query: 50 EIFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRE-RRVFIEKNFIVIF 108
E+F S + G +K ++ S+IEKL F ++EE+L M+ +E ++
Sbjct: 25 EMFNSMRKEVG-FKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAM 83
Query: 109 KAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLN 168
K YG+ ++AVN+F RM+ + C+ TV S+N++++V++ G+F +A + Y + +
Sbjct: 84 KNYGRKGKVQEAVNVFERMDF-YDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM-RDRG 141
Query: 169 IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAV 228
I P+ +F + +K+ CK A+ + + + C + Y T++ G +E E
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 229 SLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGL 288
L +M G FN L+ LCKKGD+ KL+D + +G +PN TYN + GL
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 289 CRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNE 348
C++G+L+ AV ++ ++ P+ +T+ L++G K + + L + G +
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 349 YIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIE 408
Y Y++LI+G K G + A ++ + + G P+ Y +LIDGLC EG+ + A E
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 409 MKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGK 468
KG PN Y++L++G G +A + EM ++IL+NGLCK G
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC 441
Query: 469 LMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATY 528
+ +A + K M+S+G D+ ++ +IHG+ ++ +++ + ML + + PDV TY
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML--DNGVDPDVYTY 499
Query: 529 NILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELV 588
N LLN + + M+ M+++GC P+ T +I L++L
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL------------------ 541
Query: 589 VRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAIS 637
R K +G ++E M ++ + P+A T+ ++ CK ++ A +
Sbjct: 542 CRYRKLDEALG---LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Score = 235 bits (600), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 234/435 (53%), Gaps = 6/435 (1%)
Query: 134 KQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAV 193
K V ++N+++ + + F A E Y + ++P+ T+N +I CK G+V A
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEA-EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341
Query: 194 EVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISAL 253
+ PD +TY +L+DGLC EG + A++L +E +G PN ++N LI L
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 254 CKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPND 313
+G ++ AA+L + MS KG +P T+N LV+GLC+ G ++ A L+ M++ P+
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 314 VTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKE 373
TF L+HG+ Q + + +L + + G + Y Y+SL++GL K KFE M+ +K
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 374 MMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGD 433
M+EKGC PN ++ L++ LCR K DEA L EMKNK P++ T+ +L+ GF + GD
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 434 CHKAILVWKEMKNN-SCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYS 492
A ++++M+ + + Y+I+I+ + + A ++++M+ R + D Y
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 493 SMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIML 552
M+ GFC V+ G K +M+ E P + T ++N ++ + A +++ M+
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMM--ENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMV 699
Query: 553 DQGCDPDFIT--CDI 565
+G P+ + CD+
Sbjct: 700 QKGLVPEAVNTICDV 714
Score = 233 bits (594), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 157/533 (29%), Positives = 264/533 (49%), Gaps = 29/533 (5%)
Query: 104 FIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHV 163
+ + + + +F + LF +M A + +FN +L V+ ++G + V
Sbjct: 184 YCTVVGGFYEENFKAEGYELFGKMLAS-GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKV 242
Query: 164 CKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGR 223
K + PN T+NL I+ LC+ G +D AV + + + PD TY+ L+ GLCK +
Sbjct: 243 IKR-GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK 301
Query: 224 IDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNT 283
EA L +M EG P+ + +N LI+ CK G + A ++V + G VP++ TY +
Sbjct: 302 FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 361
Query: 284 LVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERG 343
L+DGLC +G+ N+A++L N+ + PN + + TL+ G QG + A + + E+G
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Query: 344 HRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAR 403
++ L++GL K G A L K M+ KG P+ ++ LI G + K + A
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 404 EYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGL 463
E L M + G P+ +TY+SL+ G + + +K M C N ++IL+ L
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Query: 464 CKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEA-ELQ 522
C+ KL EA+ + ++M ++ + D V + ++I GFC +D LF +M +EA ++
Sbjct: 542 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM--EEAYKVS 599
Query: 523 PDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT----CDIFLKTLRDNMNPPQ 578
TYNI+++AF ++ N++ A + M+D+ PD T D F KT N+
Sbjct: 600 SSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNL---- 655
Query: 579 DGREFLDELVVR---------------LVKRQRTIGASKIIEVMLDRCLLPEA 616
G +FL E++ L R A+ II M+ + L+PEA
Sbjct: 656 -GYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 118/272 (43%), Gaps = 25/272 (9%)
Query: 367 AMQLWKEMM-EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK-NKGHLPNSFTYSSL 424
A++++ M E G + Y ++I+ L GK + E L++M+ N G+ Y
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGA 82
Query: 425 MRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGI 484
M+ + G +A+ V++ M C Y+ +++ L +G +A V+ +M RGI
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 485 KLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRA 544
DV +++ + FC ++L N M Q E+ +V Y ++ FY++N +
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEM--NVVAYCTVVGGFYEENFKAEG 200
Query: 545 MDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKII 604
++ ML G + F K LR L K+ K++
Sbjct: 201 YELFGKMLASGVS---LCLSTFNKLLR------------------VLCKKGDVKECEKLL 239
Query: 605 EVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
+ ++ R +LP T+ + +Q LC+ + A+
Sbjct: 240 DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 155/512 (30%), Positives = 257/512 (50%), Gaps = 4/512 (0%)
Query: 50 EIFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFK 109
EI + WG K +F LI+ L + +L+ M V EK F + +
Sbjct: 174 EISHAKMSVWG-IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQ 232
Query: 110 AYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNI 169
Y + + A+ + +M EF C + S N +++ +EG AL F +
Sbjct: 233 GYIEEGDLDGALRIREQM-VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVS 229
P+ TFN ++ LCK G V A+E+ + PD YTY++++ GLCK G + EAV
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351
Query: 230 LLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
+LD+M PN +N LIS LCK+ + A +L ++ KG +P+ T+N+L+ GLC
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEY 349
A+ L +M + C P++ T+ L+ +G+ + ++L +E G +
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
Y++LI G K K A +++ EM G N+V Y+ LIDGLC+ + ++A + + +M
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 410 KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKL 469
+G P+ +TY+SL+ F GD KA + + M +N C + V Y LI+GLCK G++
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 470 MEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYN 529
A + + + +GI L AY+ +I G + + + LF +ML ++ E PD +Y
Sbjct: 592 EVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREML-EQNEAPPDAVSYR 650
Query: 530 ILLNAFYQQNN-ISRAMDVLNIMLDQGCDPDF 560
I+ I A+D L +L++G P+F
Sbjct: 651 IVFRGLCNGGGPIREAVDFLVELLEKGFVPEF 682
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 166/607 (27%), Positives = 303/607 (49%), Gaps = 64/607 (10%)
Query: 69 FYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRME 128
+ ++ +L S F ++++L+ MK R F+++ ++Y + ++ +++ M
Sbjct: 86 YEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMI 145
Query: 129 AEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSL-NIQPNGLTFNLVIKALCKVG 187
EF K +N +LN+++ +G+ + +E SH S+ I+P+ TFN++IKALC+
Sbjct: 146 DEFGLKPDTHFYNRMLNLLV-DGNSLKLVEI-SHAKMSVWGIKPDVSTFNVLIKALCRAH 203
Query: 188 LVDQAVEVFRGIHLRNCAPDSYTYSTLMD------------------------------- 216
+ A+ + + PD T++T+M
Sbjct: 204 QLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVN 263
Query: 217 ----GLCKEGRIDEAVSLLDEMQ-IEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSL 271
G CKEGR+++A++ + EM +G FP+ + FN L++ LCK G + A +++D M
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323
Query: 272 KGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASD 331
+G P+ TYN+++ GLC+ G++ +AV +L+QM+ C PN VT+ TL+ K+ + +
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 332 GASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALID 391
+ L +G + ++SLI GL AM+L++EM KGCEP+ Y+ LID
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 392 GLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNH 451
LC +GK DEA L +M+ G + TY++L+ GF +A +A ++ EM+ + +
Sbjct: 444 SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSR 503
Query: 452 NEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLF 511
N V Y+ LI+GLCK+ ++ +A + QM+ G K D Y+S++ FC + + +
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIV 563
Query: 512 NQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLR 571
M E PD+ TY L++ + + A +L + +G
Sbjct: 564 QAMTSNGCE--PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI--------------- 606
Query: 572 DNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRC-LLPEASTWAIVVQQLCKPR 630
N+ P + ++ L ++++T A + ML++ P+A ++ IV + LC
Sbjct: 607 -NLTP-----HAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Query: 631 N-IRKAI 636
IR+A+
Sbjct: 661 GPIREAV 667
Score = 188 bits (478), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 182/338 (53%), Gaps = 7/338 (2%)
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRG 198
+FNS++ + + A+E + + +S +P+ T+N++I +LC G +D+A+ + +
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEM-RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 199 IHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGD 258
+ L CA TY+TL+DG CK + EA + DEM++ G N +N LI LCK
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 259 LIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
+ AA+L+D M ++G P++ TYN+L+ CR G + KA ++ M +N C P+ VT+GT
Sbjct: 521 VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 319 LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG 378
L+ G K GR + +L S++ +G + Y+ +I GLF++ K A+ L++EM+E+
Sbjct: 581 LISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQN 640
Query: 379 -CEPNTVVYSALIDGLCREGKA-DEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHK 436
P+ V Y + GLC G EA ++L+E+ KG +P + L G
Sbjct: 641 EAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEET 700
Query: 437 AI-LVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAM 473
+ LV M+ + EV ++ GL K K +A+
Sbjct: 701 LVKLVNMVMQKARFSEEEVS---MVKGLLKIRKFQDAL 735
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 181/369 (49%), Gaps = 37/369 (10%)
Query: 276 PNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASV 335
P Y ++ L R G + +L M +++C TF L+ + + + SV
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 336 L-ISLEERGHRGNEYIYSSLISGL-----FKEGKFEHA-MQLWKEMMEKGCEPNTVVYSA 388
+ ++E G + + + Y+ +++ L K + HA M +W G +P+ ++
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVW------GIKPDVSTFNV 194
Query: 389 LIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNS 448
LI LCR + A L +M + G +P+ T++++M+G+ E GD A+ + ++M
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 449 CNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSR-GIKLDVVAYSSMIHGFCNAQLVDQG 507
C+ + V +++++G CK G++ +A+ ++M ++ G D ++++++G C A V
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 508 MKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
+++ + ML QE PDV TYN +++ + + A++VL+ M+ + C P+ +T + +
Sbjct: 315 IEIMDVML-QEG-YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI 372
Query: 568 KTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLC 627
T L K + A+++ V+ + +LP+ T+ ++Q LC
Sbjct: 373 ST---------------------LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 628 KPRNIRKAI 636
RN R A+
Sbjct: 412 LTRNHRVAM 420
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 251 bits (642), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 142/437 (32%), Positives = 237/437 (54%), Gaps = 4/437 (0%)
Query: 137 VKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVF 196
+ + NS+LN A+ + + + QP+ TFN +I L + +AV +
Sbjct: 151 IVTLNSLLNGFCHGNRISDAVSLVGQMVE-MGYQPDSFTFNTLIHGLFRHNRASEAVALV 209
Query: 197 RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
+ ++ C PD TY +++GLCK G ID A+SLL +M+ P ++N +I ALC
Sbjct: 210 DRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNY 269
Query: 257 GDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTF 316
++ A L M KG PN VTYN+L+ LC G+ + A LL+ M+ K PN VTF
Sbjct: 270 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 329
Query: 317 GTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMME 376
L+ FVK+G+ + + + +R + + YSSLI+G + + A +++ M+
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Query: 377 KGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHK 436
K C PN V Y+ LI G C+ + DE E EM +G + N+ TY++L+ GFF+A +C
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449
Query: 437 AILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIH 496
A +V+K+M ++ + + YSIL++GLC NGK+ A++V++ + ++ D+ Y+ MI
Sbjct: 450 AQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIE 509
Query: 497 GFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGC 556
G C A V+ G LF + + ++P+V TY +++ F ++ A + M ++G
Sbjct: 510 GMCKAGKVEDGWDLFCSLSLK--GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 557 DPDFITCDIFLKT-LRD 572
PD T + ++ LRD
Sbjct: 568 LPDSGTYNTLIRAHLRD 584
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 143/453 (31%), Positives = 236/453 (52%), Gaps = 4/453 (0%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+ AVNLF M + ++ F+ +L+ I + F + + ++L I N T++
Sbjct: 63 DDAVNLFGDM-VKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM-QNLGISHNLYTYS 120
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
++I C+ + A+ V + PD T ++L++G C RI +AVSL+ +M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G P+ F FN LI L + A LVD M +KGC P+ VTY +V+GLC++G ++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
+SLL +M K P V + T++ +D ++ ++ +G R N Y+SLI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
L G++ A +L +M+E+ PN V +SALID +EGK EA + EM + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
FTYSSL+ GF +A +++ M + C N V Y+ LI G CK ++ E M +++
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 478 QMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQ 537
+M RG+ + V Y+++IHGF A+ D +F QM+ + PD+ TY+ILL+
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD--GVLPDIMTYSILLDGLCN 478
Query: 538 QNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
+ A+ V + +PD T +I ++ +
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 220/448 (49%), Gaps = 23/448 (5%)
Query: 189 VDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNV 248
+D AV +F + P +S L+ + K + D +SL ++MQ G N + +++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK 308
LI+ C++ L A ++ M G P+ VT N+L++G C +++ AVSL+ QMV
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 309 CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAM 368
P+ TF TL+HG + RAS+ +++ + +G + + Y +++GL K G + A+
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 369 QLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGF 428
L K+M + EP V+Y+ +ID LC ++A EM NKG PN TY+SL+R
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
G A + +M N N V +S LI+ K GKL+EA ++ +M+ R I D+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 489 VAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL 548
YSS+I+GFC +D+ +F M+ ++ P+V TYN L+ F + + M++
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDC--FPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 549 NIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVML 608
M +G + +T L+ + + A + + M+
Sbjct: 420 REMSQRGLVGNTVT---------------------YTTLIHGFFQARECDNAQIVFKQMV 458
Query: 609 DRCLLPEASTWAIVVQQLCKPRNIRKAI 636
+LP+ T++I++ LC + A+
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETAL 486
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 186/363 (51%), Gaps = 4/363 (1%)
Query: 120 AVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLV 179
A++L +ME + + V +N++++ + + + AL ++ + + I+PN +T+N +
Sbjct: 240 ALSLLKKME-QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM-DNKGIRPNVVTYNSL 297
Query: 180 IKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGT 239
I+ LC G A + + R P+ T+S L+D KEG++ EA L DEM
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 240 FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVS 299
P+ F ++ LI+ C L A + + M K C PN VTYNTL+ G C+ ++++ +
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 300 LLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLI-SLEERGHRGNEYIYSSLISGL 358
L +M V N VT+ TL+HGF Q R D A ++ + G + YS L+ GL
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFF-QARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Query: 359 FKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNS 418
GK E A+ +++ + EP+ Y+ +I+G+C+ GK ++ + + KG PN
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 536
Query: 419 FTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQ 478
TY+++M GF G +A +++EMK + Y+ LI ++G + + ++
Sbjct: 537 VTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 596
Query: 479 MLS 481
M S
Sbjct: 597 MRS 599
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 162/335 (48%), Gaps = 23/335 (6%)
Query: 293 KLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYS 352
KL+ AV+L MV ++ P+ V F L+ K + S+ ++ G N Y YS
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 353 SLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK 412
LI+ + + A+ + +MM+ G EP+ V ++L++G C + +A + +M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 413 GHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEA 472
G+ P+SFT+++L+ G F +A+ + M C + V Y I++NGLCK G + A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 473 MMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILL 532
+ + K+M I+ VV Y+++I CN + V+ + LF +M ++P+V TYN L+
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM--DNKGIRPNVVTYNSLI 298
Query: 533 NAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLV 592
S A +L+ M+++ +P+ +T L+ V
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVT---------------------FSALIDAFV 337
Query: 593 KRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLC 627
K + + A K+ + M+ R + P+ T++ ++ C
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 3/223 (1%)
Query: 106 VIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCK 165
+ K + KA ++ + LF M TV ++ ++++ Q A + +
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTV-TYTTLIHGFFQARECDNAQIVFKQMV- 458
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
S + P+ +T+++++ LC G V+ A+ VF + PD YTY+ +++G+CK G+++
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
+ L + ++G PN + ++S C+KG A L M +G +P+ TYNTL+
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 286 DGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGR 328
R G + L+ +M + + V + T G LV + GR
Sbjct: 579 RAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDGR 620
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 135/308 (43%), Gaps = 16/308 (5%)
Query: 342 RGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADE 401
R G Y Y + + K + A+ L+ +M++ P+ V +S L+ + + K D
Sbjct: 40 RDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL 99
Query: 402 AREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILIN 461
+M+N G N +TYS L+ F A+ V +M + V + L+N
Sbjct: 100 VISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLN 159
Query: 462 GLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAEL 521
G C ++ +A+ + QM+ G + D ++++IHG + + L ++M+ +
Sbjct: 160 GFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGC-- 217
Query: 522 QPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL--RDNMNPPQD 579
QPD+ TY I++N ++ +I A+ +L M +P + + + L N+N +
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 580 GREFLDELVVR------------LVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLC 627
+D +R L R AS+++ M++R + P T++ ++
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 628 KPRNIRKA 635
K + +A
Sbjct: 338 KEGKLVEA 345
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 454 VCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQ 513
V +S L++ + K K + + +QM + GI ++ YS +I+ FC + + + +
Sbjct: 82 VEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAK 141
Query: 514 MLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDN 573
M+ + +PD+ T N LLN F N IS A+ ++ M++ G PD T
Sbjct: 142 MM--KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFT----------- 188
Query: 574 MNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIR 633
+ L+ L + R A +++ M+ + P+ T+ IVV LCK +I
Sbjct: 189 ----------FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 634 KAIS 637
A+S
Sbjct: 239 LALS 242
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/453 (32%), Positives = 240/453 (52%), Gaps = 4/453 (0%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+ AV+LF M + ++ FN +L+ + + F + + ++L I + T++
Sbjct: 65 DDAVDLFGDM-VKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM-QTLGISHDLYTYS 122
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
+ I C+ + A+ V + PD T S+L++G C RI +AV+L+D+M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G P+ F F LI L A LVD M +GC P+ VTY T+V+GLC++G ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
+SLL +M K + V + T++ G K D ++ ++ +G R + + YSSLIS
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
L G++ A +L +M+E+ PN V +SALID +EGK EA + EM + P+
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
FTYSSL+ GF +A +++ M + C N V YS LI G CK ++ E M +++
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 478 QMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQ 537
+M RG+ + V Y+++IHGF A+ D +F QM+ + P++ TYNILL+ +
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV--SVGVHPNILTYNILLDGLCK 480
Query: 538 QNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
+++AM V + +PD T +I ++ +
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/444 (32%), Positives = 239/444 (53%), Gaps = 18/444 (4%)
Query: 137 VKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVI-------KALCKVGLV 189
+ + +S+LN A+ + + + +P+ TF +I KA V LV
Sbjct: 153 IVTLSSLLNGYCHSKRISDAVALVDQMVE-MGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 190 DQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVL 249
DQ V+ R C PD TY T+++GLCK G ID A+SLL +M+ + ++N +
Sbjct: 212 DQMVQ-------RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264
Query: 250 ISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC 309
I LCK + A L M KG P+ TY++L+ LC G+ + A LL+ M+ K
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 310 VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
PN VTF L+ FVK+G+ + + + +R + + YSSLI+G + + A
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF 429
+++ M+ K C PN V YS LI G C+ + +E E EM +G + N+ TY++L+ GFF
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444
Query: 430 EAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVV 489
+A DC A +V+K+M + + N + Y+IL++GLCKNGKL +AM+V++ + ++ D+
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504
Query: 490 AYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLN 549
Y+ MI G C A V+ G +LF + + + P+V YN +++ F ++ + A +L
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLK--GVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Query: 550 IMLDQGCDPDFITCDIFLKT-LRD 572
M + G P+ T + ++ LRD
Sbjct: 563 KMKEDGPLPNSGTYNTLIRARLRD 586
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/491 (27%), Positives = 231/491 (47%), Gaps = 62/491 (12%)
Query: 189 VDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNV 248
VD AV++F + P ++ L+ + K + + +SL ++MQ G + + +++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK 308
I+ C++ L A ++ M G P+ VT ++L++G C +++ AV+L++QMV
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 309 CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAM 368
P+ TF TL+HG +AS+ +++ + +RG + + Y ++++GL K G + A+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 369 QLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGF 428
L K+M + E + V+Y+ +IDGLC+ D+A EM NKG P+ FTYSSL+
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLD- 487
G A + +M N N V +S LI+ K GKL+EA ++ +M+ R I D
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 488 ----------------------------------VVAYSSMIHGFCNAQLVDQGMKLFNQ 513
VV YS++I GFC A+ V++GM+LF +
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 514 MLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDN 573
M + L + TY L++ F+Q + A V M+ G P+ +T +I L
Sbjct: 424 M--SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL------ 475
Query: 574 MNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIR 633
DG L K + A + E + + P+ T+ I+++ +CK +
Sbjct: 476 -----DG----------LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 634 KAISECWSRLC 644
W C
Sbjct: 521 DG----WELFC 527
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 210/442 (47%), Gaps = 13/442 (2%)
Query: 62 YKLGDLSFYSLIEKL----AASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFP 117
YK +F +LI L AS A +++++Q+ + V + + K
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV----TYGTVVNGLCKRGDI 239
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+ A++L +ME + + V +N++++ + + H AL ++ + + I+P+ T++
Sbjct: 240 DLALSLLKKME-KGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM-DNKGIRPDVFTYS 297
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
+I LC G A + + R P+ T+S L+D KEG++ EA L DEM
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
P+ F ++ LI+ C L A + + M K C PN VTY+TL+ G C+ ++ +
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
+ L +M V N VT+ TL+HGF + + V + G N Y+ L+ G
Sbjct: 418 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
L K GK AM +++ + EP+ Y+ +I+G+C+ GK ++ E + KG PN
Sbjct: 478 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN 537
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
Y++++ GF G +A + K+MK + N Y+ LI ++G + + K
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIK 597
Query: 478 QMLSRGIKLDVVA---YSSMIH 496
+M S G D ++M+H
Sbjct: 598 EMRSCGFAGDASTIGLVTNMLH 619
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/444 (32%), Positives = 239/444 (53%), Gaps = 21/444 (4%)
Query: 137 VKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVI-------KALCKVGLV 189
+ + +S+LN A+ + + + +P+ TF +I KA V LV
Sbjct: 153 IVTLSSLLNGYCHSKRISDAVALVDQMVE-MGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 190 DQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVL 249
DQ V+ R C PD TY T+++GLCK G ID A++LL++M+ N +FN +
Sbjct: 212 DQMVQ-------RGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTI 264
Query: 250 ISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC 309
I +LCK + A L M KG PN VTYN+L++ LC G+ + A LL+ M+ K
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Query: 310 VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
PN VTF L+ F K+G+ + + + +R + Y+ LI+G + + A Q
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF 429
++K M+ K C PN Y+ LI+G C+ + ++ E EM +G + N+ TY+++++GFF
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF 444
Query: 430 EAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVV 489
+AGDC A +V+K+M +N + + YSIL++GLC GKL A++++K + ++L++
Sbjct: 445 QAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504
Query: 490 AYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLN 549
Y++MI G C A V + LF + ++PDV TYN +++ + + A D+
Sbjct: 505 IYNTMIEGMCKAGKVGEAWDLFCSL-----SIKPDVVTYNTMISGLCSKRLLQEADDLFR 559
Query: 550 IMLDQGCDPDFITCDIFLKT-LRD 572
M + G P+ T + ++ LRD
Sbjct: 560 KMKEDGTLPNSGTYNTLIRANLRD 583
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 218/415 (52%), Gaps = 3/415 (0%)
Query: 156 ALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLM 215
A++ + + KS P+ + FN ++ A+ K+ + + + + + D YTYS +
Sbjct: 67 AVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 216 DGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCV 275
+ C+ ++ A+++L +M G P+ + L++ C + A LVD M G
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 276 PNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASV 335
P+ T+ TL+ GL K ++AV+L++QMV C P+ VT+GT+V+G K+G ++
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 336 LISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCR 395
L +E + N I++++I L K E A+ L+ EM KG PN V Y++LI+ LC
Sbjct: 246 LNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCN 305
Query: 396 EGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVC 455
G+ +A L M K PN T+++L+ FF+ G +A + +EM S + + +
Sbjct: 306 YGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTIT 365
Query: 456 YSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
Y++LING C + +L EA ++K M+S+ ++ Y+++I+GFC + V+ G++LF +M
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM- 424
Query: 516 CQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
+ L + TY ++ F+Q + A V M+ D +T I L L
Sbjct: 425 -SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 196/374 (52%), Gaps = 2/374 (0%)
Query: 189 VDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNV 248
VD AV++F + P ++ L+ + K + + +SL ++MQ G + + +++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK 308
I+ C++ L A ++ M G P+ VT ++L++G C +++ AV+L++QMV
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 309 CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAM 368
P+ TF TL+HG +AS+ +++ + +RG + + Y ++++GL K G + A+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 369 QLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGF 428
L +M + N V+++ +ID LC+ + A + EM+ KG PN TY+SL+
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
G A + M N N V ++ LI+ K GKL+EA + ++M+ R I D
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 489 VAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL 548
+ Y+ +I+GFC +D+ ++F M+ ++ P++ TYN L+N F + + +++
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDC--LPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 549 NIMLDQGCDPDFIT 562
M +G + +T
Sbjct: 422 REMSQRGLVGNTVT 435
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 176/340 (51%), Gaps = 2/340 (0%)
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
++D+AV L +M FP+ FN L+SA+ K L + M G + TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER 342
++ CR+ +L+ A+++L +M+ P+ VT +L++G+ R SD +++ + E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 343 GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
G++ + + +++LI GLF K A+ L +M+++GC+P+ V Y +++GLC+ G D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 403 REYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILING 462
L +M+ N +++++ + A+ ++ EM+ N V Y+ LIN
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 463 LCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQ 522
LC G+ +A + ML + I +VV ++++I F + + KL +M+ + +
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI--QRSID 360
Query: 523 PDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
PD TYN+L+N F N + A + M+ + C P+ T
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQT 400
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/429 (31%), Positives = 236/429 (55%), Gaps = 3/429 (0%)
Query: 140 FNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGI 199
FN++LN + E ALE + + + +P +T N ++ LC G V AV + +
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRMVE-MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219
Query: 200 HLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDL 259
P+ TY +++ +CK G+ A+ LL +M+ + ++++I LCK G L
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 260 IRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTL 319
A L + M +KG + +TYNTL+ G C G+ + LL M+ K PN VTF L
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 320 VHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGC 379
+ FVK+G+ + +L + +RG N Y+SLI G KE + E A+Q+ M+ KGC
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 380 EPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAIL 439
+P+ + ++ LI+G C+ + D+ E EM +G + N+ TY++L++GF ++G A
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 440 VWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFC 499
+++EM + + V Y IL++GLC NG+L +A+ ++ ++ ++LD+ Y +IHG C
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Query: 500 NAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
NA VD LF + + +L D YNI+++ +++++S+A + M ++G PD
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKL--DARAYNIMISELCRKDSLSKADILFRKMTEEGHAPD 577
Query: 560 FITCDIFLK 568
+T +I ++
Sbjct: 578 ELTYNILIR 586
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 151/561 (26%), Positives = 283/561 (50%), Gaps = 32/561 (5%)
Query: 87 ELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNV 146
+L + M + R + +F +F A K E + L +ME++ ++ + + ++N
Sbjct: 74 DLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESK-GIAHSIYTLSIMINC 132
Query: 147 IIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAP 206
+ A + K L +P+ + FN ++ LC V +A+E+ + P
Sbjct: 133 FCRCRKLSYAFSTMGKIMK-LGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 207 DSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV 266
T +TL++GLC G++ +AV L+D M G PN + +++ +CK G A +L+
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 267 DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQ 326
M + + V Y+ ++DGLC+ G L+ A +L N+M + +T+ TL+ GF
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 327 GRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVY 386
GR DGA +L + +R N +S LI KEGK A QL KEMM++G PNT+ Y
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 387 SALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKN 446
++LIDG C+E + +EA + + M +KG P+ T++ L+ G+ +A + +++EM
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 447 NSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQ 506
N V Y+ L+ G C++GKL A ++++M+SR ++ D+V+Y ++ G C+ +++
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 507 GMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL---------------NIM 551
+++F ++ ++++++ D+ Y I+++ + + A D+ NIM
Sbjct: 492 ALEIFGKI--EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIM 549
Query: 552 LDQGCDPDFIT-CDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQR-----TIGASKIIE 605
+ + C D ++ DI + + + + P DEL ++ R A+++IE
Sbjct: 550 ISELCRKDSLSKADILFRKMTEEGHAP-------DELTYNILIRAHLGDDDATTAAELIE 602
Query: 606 VMLDRCLLPEASTWAIVVQQL 626
M + ST +V+ L
Sbjct: 603 EMKSSGFPADVSTVKMVINML 623
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 229/447 (51%), Gaps = 23/447 (5%)
Query: 190 DQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVL 249
D AV++FR + P ++ L + K + + ++L +M+ +G + + +++
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 250 ISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC 309
I+ C+ L A + + G P+ V +NTL++GLC + ++++A+ L+++MV
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 310 VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
P +T TLV+G G+ SD ++ + E G + NE Y +++ + K G+ AM+
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF 429
L ++M E+ + + V YS +IDGLC++G D A EM+ KG + TY++L+ GF
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 430 EAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVV 489
AG + ++M + N V +S+LI+ K GKL EA + K+M+ RGI + +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 490 AYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLN 549
Y+S+I GFC +++ +++ + M+ + + PD+ T+NIL+N + + N I +++
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCD--PDIMTFNILINGYCKANRIDDGLELFR 427
Query: 550 IMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLD 609
M +G + +T + LV + + A K+ + M+
Sbjct: 428 EMSLRGVIANTVT---------------------YNTLVQGFCQSGKLEVAKKLFQEMVS 466
Query: 610 RCLLPEASTWAIVVQQLCKPRNIRKAI 636
R + P+ ++ I++ LC + KA+
Sbjct: 467 RRVRPDIVSYKILLDGLCDNGELEKAL 493
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 205/403 (50%), Gaps = 4/403 (0%)
Query: 62 YKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEK-NFIVIFKAYGKAHFPEKA 120
++ ++++ ++ + S A ELL++M+ ER + ++ + +I K + A
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKME-ERNIKLDAVKYSIIIDGLCKDGSLDNA 282
Query: 121 VNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVI 180
NLF+ ME + K + ++N+++ G + + + K I PN +TF+++I
Sbjct: 283 FNLFNEMEIKGF-KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR-KISPNVVTFSVLI 340
Query: 181 KALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTF 240
+ K G + +A ++ + + R AP++ TY++L+DG CKE R++EA+ ++D M +G
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 241 PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSL 300
P+ FN+LI+ CK + +L MSL+G + N VTYNTLV G C+ GKL A L
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 301 LNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFK 360
+MV+ + P+ V++ L+ G G + +E+ + IY +I G+
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Query: 361 EGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFT 420
K + A L+ + KG + + Y+ +I LCR+ +A +M +GH P+ T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
Query: 421 YSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGL 463
Y+ L+R D A + +EMK++ + ++IN L
Sbjct: 581 YNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 187/384 (48%), Gaps = 2/384 (0%)
Query: 120 AVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLV 179
A+ L +ME E + K ++ +++ + ++G A ++ + + + + +T+N +
Sbjct: 247 AMELLRKME-ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIITYNTL 304
Query: 180 IKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGT 239
I C G D ++ R + R +P+ T+S L+D KEG++ EA LL EM G
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Query: 240 FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVS 299
PN +N LI CK+ L A ++VD M KGC P+ +T+N L++G C+ +++ +
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 424
Query: 300 LLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
L +M + N VT+ TLV GF + G+ + + R R + Y L+ GL
Sbjct: 425 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Query: 360 KEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSF 419
G+ E A++++ ++ + E + +Y +I G+C K D+A + + KG ++
Sbjct: 485 DNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDAR 544
Query: 420 TYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM 479
Y+ ++ KA +++++M +E+ Y+ILI + A + ++M
Sbjct: 545 AYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604
Query: 480 LSRGIKLDVVAYSSMIHGFCNAQL 503
S G DV +I+ + +L
Sbjct: 605 KSSGFPADVSTVKMVINMLSSGEL 628
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 159/551 (28%), Positives = 281/551 (50%), Gaps = 10/551 (1%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
+ F L+ +A F + L ++M+R V + ++ + + A+ L +
Sbjct: 86 VEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGK 145
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
M + + ++ + +S+LN A+ + + + +P+ +TF +I L
Sbjct: 146 M-MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE-MGYRPDTITFTTLIHGLFLH 203
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
+AV + + R C P+ TY +++GLCK G D A++LL++M+ + +F
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA 306
N +I +LCK + A L M KG PN VTY++L+ LC G+ + A LL+ M+
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEH 366
K PN VTF L+ FVK+G+ + + + +R + + Y+SL++G + +
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 367 AMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMR 426
A Q+++ M+ K C P+ V Y+ LI G C+ + ++ E EM ++G + ++ TY++L++
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 427 GFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKL 486
G F GDC A V+K+M ++ + + YSIL++GLC NGKL +A+ V+ M IKL
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 487 DVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMD 546
D+ Y++MI G C A VD G LF + + ++P+V TYN +++ + + A
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK--GVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 547 VLNIMLDQGCDPDFITCDIFLKT-LRDNMNPPQDGREFLDEL-VVRLVKRQRTIG--ASK 602
+L M + G P+ T + ++ LRD E + E+ R V TIG A+
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAAS--AELIREMRSCRFVGDASTIGLVANM 619
Query: 603 IIEVMLDRCLL 613
+ + LD+ L
Sbjct: 620 LHDGRLDKSFL 630
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 221/434 (50%), Gaps = 3/434 (0%)
Query: 140 FNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGI 199
+ +L + + A+ + + KS + P+ + FN ++ A+ K+ D + + +
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPL-PSIVEFNKLLSAIAKMKKFDVVISLGEKM 111
Query: 200 HLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDL 259
YTY+ L++ C+ +I A++LL +M G P+ + L++ C +
Sbjct: 112 QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 260 IRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTL 319
A LVD M G P+ +T+ TL+ GL K ++AV+L+++MV C PN VT+G +
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 320 VHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGC 379
V+G K+G ++L +E + I++++I L K + A+ L+KEM KG
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291
Query: 380 EPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAIL 439
PN V YS+LI LC G+ +A + L +M K PN T+++L+ F + G +A
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351
Query: 440 VWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFC 499
++ +M S + + Y+ L+NG C + +L +A +++ M+S+ DVV Y+++I GFC
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Query: 500 NAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
++ V+ G +LF +M L D TY L+ + + A V M+ G PD
Sbjct: 412 KSKRVEDGTELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 560 FITCDIFLKTLRDN 573
+T I L L +N
Sbjct: 470 IMTYSILLDGLCNN 483
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 217/450 (48%), Gaps = 18/450 (4%)
Query: 202 RNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIR 261
R + S Y ++ + ++D+A+ L M P+ FN L+SA+ K
Sbjct: 44 RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 103
Query: 262 AAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVH 321
L + M V TYN L++ CR+ +++ A++LL +M+ P+ VT +L++
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 322 GFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEP 381
G+ R SD +++ + E G+R + +++LI GLF K A+ L M+++GC+P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 382 NTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVW 441
N V Y +++GLC+ G D A L +M+ + +++++ + A+ ++
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 442 KEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNA 501
KEM+ N V YS LI+ LC G+ +A + M+ + I ++V ++++I F
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343
Query: 502 QLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFI 561
+ KL++ M+ + + PD+ TYN L+N F + + +A + M+ + C PD +
Sbjct: 344 GKFVEAEKLYDDMI--KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 562 TCDIFLKTLRDNMNPPQDGREFLDELVVR-LVKRQRTI--------------GASKIIEV 606
T + +K + +DG E E+ R LV T A K+ +
Sbjct: 402 TYNTLIKGFCKS-KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 607 MLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
M+ + P+ T++I++ LC + KA+
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 204/424 (48%), Gaps = 10/424 (2%)
Query: 62 YKLGDLSFYSLIEKL----AASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFP 117
Y+ ++F +LI L AS A ++ ++Q+ + V + V+ K
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV----TYGVVVNGLCKRGDT 241
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+ A+NL ++MEA + V FN++++ + + H AL + + ++ I+PN +T++
Sbjct: 242 DLALNLLNKMEAA-KIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYS 299
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
+I LC G A ++ + + P+ T++ L+D KEG+ EA L D+M
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
P+ F +N L++ C L +A ++ + M K C P+ VTYNTL+ G C+ ++
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
L +M V + VT+ TL+ G G + V + G + YS L+ G
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
L GK E A++++ M + + + +Y+ +I+G+C+ GK D+ + + KG PN
Sbjct: 480 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
TY++++ G +A + K+MK + N Y+ LI ++G + + +
Sbjct: 540 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIR 599
Query: 478 QMLS 481
+M S
Sbjct: 600 EMRS 603
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 108/240 (45%), Gaps = 23/240 (9%)
Query: 398 KADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYS 457
K D+A M LP+ ++ L+ + I + ++M+ H Y+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 458 ILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQ 517
ILIN C+ ++ A+ + +M+ G + +V SS+++G+C+ + + + L +QM+
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV-- 182
Query: 518 EAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPP 577
E +PD T+ L++ + N S A+ +++ M+ +GC P+ +T +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV------------ 230
Query: 578 QDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAIS 637
+V L KR T A ++ M + + + ++ LCK R++ A++
Sbjct: 231 ---------VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 136/404 (33%), Positives = 224/404 (55%), Gaps = 3/404 (0%)
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVS 229
QPN +TFN +I L +AV + + R C PD +TY T+++GLCK G ID A+S
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 230 LLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
LL +M+ + ++ +I ALC ++ A L M KG PN VTYN+L+ LC
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEY 349
G+ + A LL+ M+ K PN VTF L+ FVK+G+ + + + +R + +
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
YSSLI+G + + A +++ M+ K C PN V Y+ LI G C+ + +E E EM
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 410 KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKL 469
+G + N+ TY++L++G F+AGDC A ++K+M ++ + + YSIL++GLCK GKL
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 470 MEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYN 529
+A++V++ + ++ D+ Y+ MI G C A V+ G LF + + ++P+V Y
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK--GVKPNVIIYT 539
Query: 530 ILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKT-LRD 572
+++ F ++ A + M + G P+ T + ++ LRD
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRD 583
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 234/453 (51%), Gaps = 4/453 (0%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+ AV+LF M + ++ FN +L+ I + F + + ++L I + ++N
Sbjct: 62 DDAVDLFGEM-VQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERM-QNLRISYDLYSYN 119
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
++I C+ + A+ V + PD T S+L++G C RI EAV+L+D+M +
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
PN FN LI L A L+D M +GC P+ TY T+V+GLC++G ++ A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
+SLL +M K + V + T++ +D ++ ++ +G R N Y+SLI
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
L G++ A +L +M+E+ PN V +SALID +EGK EA + EM + P+
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
FTYSSL+ GF +A +++ M + C N V Y+ LI G CK ++ E M +++
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 478 QMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQ 537
+M RG+ + V Y+++I G A D K+F +M+ + PD+ TY+ILL+ +
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD--GVPPDIITYSILLDGLCK 477
Query: 538 QNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
+ +A+ V + +PD T +I ++ +
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Score = 209 bits (531), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 226/448 (50%), Gaps = 23/448 (5%)
Query: 189 VDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNV 248
+D AV++F + P ++ L+ + K + D +SL + MQ + + +N+
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK 308
LI+ C++ L A ++ M G P+ VT ++L++G C ++++AV+L++QM +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 309 CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAM 368
PN VTF TL+HG +AS+ +++ + RG + + + Y ++++GL K G + A+
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 369 QLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGF 428
L K+M + E + V+Y+ +ID LC ++A EM NKG PN TY+SL+R
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
G A + +M N N V +S LI+ K GKL+EA ++ +M+ R I D+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 489 VAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL 548
YSS+I+GFC +D+ +F M+ ++ P+V TYN L+ F + + M++
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDC--FPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 549 NIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVML 608
M +G + +T + L+ L + A KI + M+
Sbjct: 419 REMSQRGLVGNTVT---------------------YNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 609 DRCLLPEASTWAIVVQQLCKPRNIRKAI 636
+ P+ T++I++ LCK + KA+
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKAL 485
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 215/418 (51%), Gaps = 12/418 (2%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIV---IFKAYGKAHFPEKAVNL 123
++ +++ L D LL++M++ + IE + ++ I A A+NL
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKMEKGK---IEADVVIYTTIIDALCNYKNVNDALNL 277
Query: 124 FHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKAL 183
F M+ + + V ++NS++ + G + A S + + I PN +TF+ +I A
Sbjct: 278 FTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAF 335
Query: 184 CKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNP 243
K G + +A +++ + R+ PD +TYS+L++G C R+DEA + + M + FPN
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 244 FVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQ 303
+N LI CK + +L MS +G V N VTYNTL+ GL + G + A + +
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 304 MVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGK 363
MV++ P+ +T+ L+ G K G+ V L++ + Y Y+ +I G+ K GK
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 364 FEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSS 423
E L+ + KG +PN ++Y+ +I G CR+G +EA EMK G LPNS TY++
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 575
Query: 424 LMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLS 481
L+R GD + + KEM++ + S++IN L +G+L ++ + +MLS
Sbjct: 576 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS---YLEMLS 629
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 190/384 (49%), Gaps = 2/384 (0%)
Query: 120 AVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLV 179
A++L +ME + + V + ++++ + + + AL ++ + + I+PN +T+N +
Sbjct: 239 ALSLLKKME-KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM-DNKGIRPNVVTYNSL 296
Query: 180 IKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGT 239
I+ LC G A + + R P+ T+S L+D KEG++ EA L DEM
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 240 FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVS 299
P+ F ++ LI+ C L A + + M K C PN VTYNTL+ G C+ ++ + +
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 300 LLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
L +M V N VT+ TL+ G + G + + G + YS L+ GL
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 360 KEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSF 419
K GK E A+ +++ + + EP+ Y+ +I+G+C+ GK ++ + + KG PN
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 420 TYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM 479
Y++++ GF G +A +++EMK + N Y+ LI ++G + + K+M
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Query: 480 LSRGIKLDVVAYSSMIHGFCNAQL 503
S G D S +I+ + +L
Sbjct: 597 RSCGFVGDASTISMVINMLHDGRL 620
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 88/165 (53%), Gaps = 2/165 (1%)
Query: 398 KADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYS 457
K D+A + EM LP+ ++ L+ + I + + M+N +++ Y+
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 458 ILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQ 517
ILIN C+ +L A+ V +M+ G + D+V SS+++G+C+ + + + + L +QM
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 518 EAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
E QP+ T+N L++ + N S A+ +++ M+ +GC PD T
Sbjct: 180 --EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFT 222
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 142/346 (41%), Gaps = 54/346 (15%)
Query: 333 ASVLISLEERGHRGNEYIYSSLIS-GLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALID 391
AS L SL Y Y +S + + K + A+ L+ EM++ P+ V ++ L+
Sbjct: 29 ASPLFSLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLS 88
Query: 392 GLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNH 451
+ + K D M+N + ++Y+ L+ F A+ V +M
Sbjct: 89 AIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEP 148
Query: 452 NEVCYSILINGLCKNGKLMEAMMVWKQ--------------------------------- 478
+ V S L+NG C ++ EA+ + Q
Sbjct: 149 DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALI 208
Query: 479 --MLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFY 536
M++RG + D+ Y ++++G C +D + L +M ++ +++ DV Y +++A
Sbjct: 209 DRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM--EKGKIEADVVIYTTIIDALC 266
Query: 537 QQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVR------ 590
N++ A+++ M ++G P+ +T + ++ L N D L +++ R
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC-NYGRWSDASRLLSDMIERKINPNV 325
Query: 591 ---------LVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLC 627
VK + + A K+ + M+ R + P+ T++ ++ C
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 233/430 (54%), Gaps = 3/430 (0%)
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRG 198
+F++++N EG A+ + + + +P+ +T + +I LC G V +A+ +
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVE-MKQRPDLVTVSTLINGLCLKGRVSEALVLIDR 200
Query: 199 IHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGD 258
+ PD TY +++ LCK G A+ L +M+ + ++++I +LCK G
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 259 LIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
A L + M +KG + VTY++L+ GLC GK + +L +M+ +P+ VTF
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 319 LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG 378
L+ FVK+G+ + + + RG + Y+SLI G KE A Q++ M+ KG
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 379 CEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAI 438
CEP+ V YS LI+ C+ + D+ E+ +KG +PN+ TY++L+ GF ++G + A
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 439 LVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGF 498
+++EM + + V Y IL++GLC NG+L +A+ ++++M + L + Y+ +IHG
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500
Query: 499 CNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDP 558
CNA VD LF + + ++PDV TYN+++ ++ ++S A + M + GC P
Sbjct: 501 CNASKVDDAWSLFCSL--SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Query: 559 DFITCDIFLK 568
D T +I ++
Sbjct: 559 DDFTYNILIR 568
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 154/551 (27%), Positives = 283/551 (51%), Gaps = 41/551 (7%)
Query: 109 KAYGKAHFPEKAVNLFHR---MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCK 165
KA EK +L H EA+ K+ ++ N ++++ + + A++ + + +
Sbjct: 11 KASNFTQILEKGTSLLHYSSITEAKLSYKERLR--NGIVDIKVND-----AIDLFESMIQ 63
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
S + P + FN + A+ + D + +G+ L D YT + +++ C++ ++
Sbjct: 64 SRPL-PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLL 122
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
A S+L G P+ F+ L++ C +G + A LVD M P+ VT +TL+
Sbjct: 123 FAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLI 182
Query: 286 DGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR 345
+GLC KG++++A+ L+++MV P++VT+G +++ K G ++ + +EER +
Sbjct: 183 NGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK 242
Query: 346 GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREY 405
+ YS +I L K+G F+ A+ L+ EM KG + + V YS+LI GLC +GK D+ +
Sbjct: 243 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302
Query: 406 LIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCK 465
L EM + +P+ T+S+L+ F + G +A ++ EM + + Y+ LI+G CK
Sbjct: 303 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 466 NGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDV 525
L EA ++ M+S+G + D+V YS +I+ +C A+ VD GM+LF ++ L P+
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI--SSKGLIPNT 420
Query: 526 ATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDN--MNPPQDGREF 583
TYN L+ F Q ++ A ++ M+ +G P +T I L L DN +N
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL----- 475
Query: 584 LDELVVRLVKRQRTIG-------------ASKIIEV------MLDRCLLPEASTWAIVVQ 624
E+ ++ K + T+G ASK+ + + D+ + P+ T+ +++
Sbjct: 476 --EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 533
Query: 625 QLCKPRNIRKA 635
LCK ++ +A
Sbjct: 534 GLCKKGSLSEA 544
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 208/396 (52%), Gaps = 2/396 (0%)
Query: 119 KAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNL 178
+A+ L RM E+ + ++ VLN + + G+ AL+ + + + NI+ + + +++
Sbjct: 193 EALVLIDRM-VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM-EERNIKASVVQYSI 250
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG 238
VI +LCK G D A+ +F + ++ D TYS+L+ GLC +G+ D+ +L EM
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAV 298
P+ F+ LI K+G L+ A +L + M +G P+ +TYN+L+DG C++ L++A
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 299 SLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGL 358
+ + MV+ C P+ VT+ L++ + K R DG + + +G N Y++L+ G
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 359 FKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNS 418
+ GK A +L++EM+ +G P+ V Y L+DGLC G+ ++A E +M+
Sbjct: 431 CQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGI 490
Query: 419 FTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQ 478
Y+ ++ G A A ++ + + + V Y+++I GLCK G L EA M++++
Sbjct: 491 GIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 550
Query: 479 MLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
M G D Y+ +I + ++L +M
Sbjct: 551 MKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Score = 199 bits (506), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 229/448 (51%), Gaps = 23/448 (5%)
Query: 189 VDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNV 248
V+ A+++F + P ++ L + + + D + M++ G + + +
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK 308
+I+ C+K L+ A ++ G P+ +T++TLV+G C +G++++AV+L+++MV K
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 309 CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAM 368
P+ VT TL++G +GR S+ ++ + E G + +E Y +++ L K G A+
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 369 QLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGF 428
L+++M E+ + + V YS +ID LC++G D+A EM+ KG + TYSSL+ G
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
G + +EM + + V +S LI+ K GKL+EA ++ +M++RGI D
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 489 VAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL 548
+ Y+S+I GFC + + ++F+ M+ + E PD+ TY+IL+N++ + + M +
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCE--PDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 549 NIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVML 608
+ +G P+ IT + LV+ + + A ++ + M+
Sbjct: 409 REISSKGLIPNTIT---------------------YNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 609 DRCLLPEASTWAIVVQQLCKPRNIRKAI 636
R + P T+ I++ LC + KA+
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKAL 475
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 195/362 (53%), Gaps = 8/362 (2%)
Query: 120 AVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLV 179
A++LF +ME E + K +V ++ V++ + ++G F AL ++ + + I+ + +T++ +
Sbjct: 229 ALDLFRKME-ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM-EMKGIKADVVTYSSL 286
Query: 180 IKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGT 239
I LC G D ++ R + RN PD T+S L+D KEG++ EA L +EM G
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 240 FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVS 299
P+ +N LI CK+ L A ++ D M KGC P+ VTY+ L++ C+ +++ +
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 300 LLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
L ++ + +PN +T+ TLV GF + G+ + + + RG + Y L+ GL
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Query: 360 KEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSF 419
G+ A++++++M + +Y+ +I G+C K D+A + +KG P+
Sbjct: 467 DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 526
Query: 420 TYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILI------NGLCKNGKLMEAM 473
TY+ ++ G + G +A +++++MK + C ++ Y+ILI +GL + +L+E M
Sbjct: 527 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Query: 474 MV 475
V
Sbjct: 587 KV 588
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 154/327 (47%), Gaps = 2/327 (0%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
+++ SLI L + ++L++M + F + + K +A L++
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
M T+ ++NS+++ +E H A + + + S +P+ +T++++I + CK
Sbjct: 341 MITRGIAPDTI-TYNSLIDGFCKENCLHEANQMFDLMV-SKGCEPDIVTYSILINSYCKA 398
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
VD + +FR I + P++ TY+TL+ G C+ G+++ A L EM G P+ +
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA 306
+L+ LC G+L +A ++ + M YN ++ G+C K++ A SL +
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEH 366
P+ VT+ ++ G K+G S+ + ++E G +++ Y+ LI
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS 578
Query: 367 AMQLWKEMMEKGCEPNTVVYSALIDGL 393
+++L +EM G ++ +ID L
Sbjct: 579 SVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 102/240 (42%), Gaps = 23/240 (9%)
Query: 398 KADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYS 457
K ++A + M LP ++ L + K M+ N H+ +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 458 ILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQ 517
I+IN C+ KL+ A V + G + D + +S++++GFC V + + L ++M+
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV-- 167
Query: 518 EAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPP 577
E + +PD+ T + L+N + +S A+ +++ M++ G PD +T L
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN--------- 218
Query: 578 QDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAIS 637
RL K + A + M +R + ++IV+ LCK + A+S
Sbjct: 219 ------------RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALS 266
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/438 (31%), Positives = 236/438 (53%), Gaps = 4/438 (0%)
Query: 136 TVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEV 195
++ + +S+LN A+ + + + +P+ +TF +I L +AV +
Sbjct: 79 SIVTLSSLLNGYCHGKRISDAVALVDQMVE-MGYRPDTITFTTLIHGLFLHNKASEAVAL 137
Query: 196 FRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCK 255
+ R C P+ TY +++GLCK G ID A +LL++M+ + +FN +I +LCK
Sbjct: 138 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 197
Query: 256 KGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVT 315
+ A L M KG PN VTY++L+ LC G+ + A LL+ M+ K PN VT
Sbjct: 198 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 257
Query: 316 FGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM 375
F L+ FVK+G+ + + + +R + + Y+SLI+G + + A Q+++ M+
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 376 EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCH 435
K C P+ Y+ LI G C+ + ++ E EM ++G + ++ TY++L++G F GDC
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Query: 436 KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
A V+K+M ++ + + YSIL++GLC NGKL +A+ V+ M IKLD+ Y++MI
Sbjct: 378 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Query: 496 HGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQG 555
G C A VD G LF + + ++P+V TYN +++ + + A +L M + G
Sbjct: 438 EGMCKAGKVDDGWDLFCSLSLK--GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 556 CDPDFITCDIFLKT-LRD 572
PD T + ++ LRD
Sbjct: 496 PLPDSGTYNTLIRAHLRD 513
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 216/416 (51%), Gaps = 3/416 (0%)
Query: 136 TVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEV 195
++ FN +L+ I + F + + + L I N T+N++I C+ + A+ +
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 196 FRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCK 255
+ P T S+L++G C RI +AV+L+D+M G P+ F LI L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 256 KGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVT 315
A LVD M +GC PN VTY +V+GLC++G ++ A +LLN+M A K + V
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 316 FGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM 375
F T++ K D ++ +E +G R N YSSLIS L G++ A QL +M+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 376 EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCH 435
EK PN V ++ALID +EGK EA + +M + P+ FTY+SL+ GF
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 436 KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
KA +++ M + C + Y+ LI G CK+ ++ + ++++M RG+ D V Y+++I
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 496 HGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIM 551
G + D K+F QM+ + PD+ TY+ILL+ + +A++V + M
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSD--GVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 208/403 (51%), Gaps = 2/403 (0%)
Query: 171 PNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSL 230
P+ FN ++ A+ K+ D + + + + + YTY+ L++ C+ +I A++L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 231 LDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCR 290
L +M G P+ + L++ C + A LVD M G P+ +T+ TL+ GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 291 KGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYI 350
K ++AV+L+++MV C PN VT+G +V+G K+G ++L +E + I
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
++++I L K + A+ L+KEM KG PN V YS+LI LC G+ +A + L +M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
K PN T+++L+ F + G +A + +M S + + Y+ LING C + +L
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 471 EAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNI 530
+A +++ M+S+ D+ Y+++I GFC ++ V+ G +LF +M L D TY
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM--SHRGLVGDTVTYTT 365
Query: 531 LLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDN 573
L+ + + A V M+ G PD +T I L L +N
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 212/431 (49%), Gaps = 23/431 (5%)
Query: 206 PDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKL 265
P + ++ L+ + K + D +SL ++MQ G N + +N+LI+ C++ + A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 266 VDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVK 325
+ M G P+ VT ++L++G C +++ AV+L++QMV P+ +TF TL+HG
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 326 QGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVV 385
+AS+ +++ + +RG + N Y +++GL K G + A L +M E + V+
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 386 YSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMK 445
++ +ID LC+ D+A EM+ KG PN TYSSL+ G A + +M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 446 NNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVD 505
N N V ++ LI+ K GK +EA + M+ R I D+ Y+S+I+GFC +D
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 506 QGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDI 565
+ ++F M+ ++ PD+ TYN L+ F + + ++ M +G D +T
Sbjct: 308 KAKQMFEFMVSKDC--FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 566 FLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQ 625
++ L DG A K+ + M+ + P+ T++I++
Sbjct: 366 LIQGLF------HDGD---------------CDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 626 LCKPRNIRKAI 636
LC + KA+
Sbjct: 405 LCNNGKLEKAL 415
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 178/343 (51%), Gaps = 2/343 (0%)
Query: 104 FIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHV 163
F I + K + A+NLF ME + + V +++S+++ + G + A + S +
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 164 CKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGR 223
+ I PN +TFN +I A K G +A ++ + R+ PD +TY++L++G C R
Sbjct: 247 IEK-KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 224 IDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNT 283
+D+A + + M + FP+ +N LI CK + +L MS +G V + VTY T
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 284 LVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERG 343
L+ GL G + A + QMV++ P+ +T+ L+ G G+ V +++
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 344 HRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAR 403
+ + YIY+++I G+ K GK + L+ + KG +PN V Y+ +I GLC + EA
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 404 EYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKN 446
L +MK G LP+S TY++L+R GD + + +EM++
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 202/424 (47%), Gaps = 10/424 (2%)
Query: 62 YKLGDLSFYSLIEKL----AASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFP 117
Y+ ++F +LI L AS A ++ ++Q+ + V + V+ K
Sbjct: 111 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV----TYGVVVNGLCKRGDI 166
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+ A NL ++MEA + V FN++++ + + H AL + + ++ I+PN +T++
Sbjct: 167 DLAFNLLNKMEAA-KIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYS 224
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
+I LC G A ++ + + P+ T++ L+D KEG+ EA L D+M
Sbjct: 225 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
P+ F +N LI+ C L +A ++ + M K C P+ TYNTL+ G C+ ++
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
L +M V + VT+ TL+ G G + V + G + YS L+ G
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
L GK E A++++ M + + + +Y+ +I+G+C+ GK D+ + + KG PN
Sbjct: 405 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 464
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
TY++++ G +A + K+MK + + Y+ LI ++G + + +
Sbjct: 465 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIR 524
Query: 478 QMLS 481
+M S
Sbjct: 525 EMRS 528
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 177/393 (45%), Gaps = 58/393 (14%)
Query: 240 FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVS 299
P+ F FN L+SA+ K L + M G N TYN L++ CR+ +++ A++
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 300 LLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
LL +M+ P+ VT +L++G Y + IS
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNG--------------------------YCHGKRIS--- 97
Query: 360 KEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSF 419
A+ L +M+E G P+T+ ++ LI GL KA EA + M +G PN
Sbjct: 98 ------DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 151
Query: 420 TYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM 479
TY ++ G + GD A + +M+ + V ++ +I+ LCK + +A+ ++K+M
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Query: 480 LSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQN 539
++GI+ +VV YSS+I C+ +L + M+ E ++ P++ T+N L++AF ++
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI--EKKINPNLVTFNALIDAFVKEG 269
Query: 540 NISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIG 599
A + + M+ + DPD T + L+ R
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFT---------------------YNSLINGFCMHDRLDK 308
Query: 600 ASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNI 632
A ++ E M+ + P+ T+ +++ CK + +
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 341
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 111/223 (49%), Gaps = 3/223 (1%)
Query: 106 VIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCK 165
+ K + K+ E LF M TV ++ +++ + +G A + + +
Sbjct: 330 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTV-TYTTLIQGLFHDGDCDNAQKVFKQMV- 387
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
S + P+ +T+++++ LC G +++A+EVF + D Y Y+T+++G+CK G++D
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 447
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
+ L + ++G PN +N +IS LC K L A L+ M G +P+ TYNTL+
Sbjct: 448 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Query: 286 DGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGR 328
R G + L+ +M + + V + T G LV + GR
Sbjct: 508 RAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGR 549
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 456 YSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
++ L++ + K K + + ++M GI ++ Y+ +I+ FC + + L +M+
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 516 CQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMN 575
+ +P + T + LLN + IS A+ +++ M++ G PD IT
Sbjct: 73 --KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT------------- 117
Query: 576 PPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKA 635
L+ L + A +++ M+ R P T+ +VV LCK +I A
Sbjct: 118 --------FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169
Query: 636 IS 637
+
Sbjct: 170 FN 171
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 238 bits (607), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 217/388 (55%), Gaps = 2/388 (0%)
Query: 172 NGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLL 231
N ++N+VI +C++G + +A + + L+ PD +YST+++G C+ G +D+ L+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 232 DEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRK 291
+ M+ +G PN +++ +I LC+ L A + M +G +P+ V Y TL+DG C++
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 292 GKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIY 351
G + A +M + P+ +T+ ++ GF + G + + + +G + +
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 352 SSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKN 411
+ LI+G K G + A ++ M++ GC PN V Y+ LIDGLC+EG D A E L EM
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 412 KGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLME 471
G PN FTY+S++ G ++G+ +A+ + E + N + V Y+ L++ CK+G++ +
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 472 AMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNIL 531
A + K+ML +G++ +V ++ +++GFC +++ G KL N ML + + P+ T+N L
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK--GIAPNATTFNSL 602
Query: 532 LNAFYQQNNISRAMDVLNIMLDQGCDPD 559
+ + +NN+ A + M +G PD
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 211/440 (47%), Gaps = 3/440 (0%)
Query: 137 VKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVF 196
V S+++V+N + G + + V K ++PN + +I LC++ + +A E F
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLI-EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 197 RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
+ + PD+ Y+TL+DG CK G I A EM P+ + +IS C+
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 257 GDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTF 316
GD++ A KL M KG P+ VT+ L++G C+ G + A + N M+ C PN VT+
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 317 GTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMME 376
TL+ G K+G +L + + G + N + Y+S+++GL K G E A++L E
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 377 KGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHK 436
G +TV Y+ L+D C+ G+ D+A+E L EM KG P T++ LM GF G
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 437 AILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIH 496
+ M N ++ L+ C L A ++K M SRG+ D Y +++
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 497 GFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGC 556
G C A+ + + LF +M + V+TY++L+ F ++ A +V + M +G
Sbjct: 640 GHCKARNMKEAWFLFQEM--KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Query: 557 DPDFITCDIFLKTLRDNMNP 576
D D F T P
Sbjct: 698 AADKEIFDFFSDTKYKGKRP 717
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 233/489 (47%), Gaps = 45/489 (9%)
Query: 176 FNLVIKALCKVGLVDQAVEVFR--------------GIHLRNCAPDSYTYSTLMDGLCKE 221
F++ + L GL+ +A VF ++L + D Y +T
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT-------- 229
Query: 222 GRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTY 281
A+ + E G N +N++I +C+ G + A L+ M LKG P+ ++Y
Sbjct: 230 -----AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISY 284
Query: 282 NTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEE 341
+T+V+G CR G+L+K L+ M PN +G+++ + + ++ +
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 342 RGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADE 401
+G + +Y++LI G K G A + + EM + P+ + Y+A+I G C+ G E
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 402 AREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILIN 461
A + EM KG P+S T++ L+ G+ +AG A V M C+ N V Y+ LI+
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 462 GLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAEL 521
GLCK G L A + +M G++ ++ Y+S+++G C + +++ +KL + + A L
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF--EAAGL 522
Query: 522 QPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGR 581
D TY L++A+ + + +A ++L ML +G P +T ++ + + +DG
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH-GMLEDGE 581
Query: 582 EFLDELVVR-----------LVK----RQRTIGASKIIEVMLDRCLLPEASTWAIVVQQL 626
+ L+ ++ + LVK R A+ I + M R + P+ T+ +V+
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Query: 627 CKPRNIRKA 635
CK RN+++A
Sbjct: 642 CKARNMKEA 650
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 153/334 (45%), Gaps = 2/334 (0%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
L++ ++I D +L +M + F + Y KA + A + +
Sbjct: 387 LTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH 446
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
M + C V ++ ++++ + +EG A E + K + +QPN T+N ++ LCK
Sbjct: 447 M-IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK-IGLQPNIFTYNSIVNGLCKS 504
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
G +++AV++ D+ TY+TLMD CK G +D+A +L EM +G P F
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA 306
NVL++ C G L KL++ M KG PN T+N+LV C + L A ++ M +
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEH 366
P+ T+ LV G K + + ++ +G + YS LI G K KF
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 367 AMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
A +++ +M +G + ++ D + + D
Sbjct: 685 AREVFDQMRREGLAADKEIFDFFSDTKYKGKRPD 718
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 2/208 (0%)
Query: 103 NFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSH 162
+ + AY K+ +KA + M + + T+ +FN ++N G + +
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 163 VCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEG 222
+ I PN TFN ++K C + A +++ + R PD TY L+ G CK
Sbjct: 587 MLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
+ EA L EM+ +G + ++VLI K+ + A ++ D M +G ++ ++
Sbjct: 646 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCV 310
D + + + V +++++ N V
Sbjct: 706 FFSDTKYKGKRPDTIVDPIDEIIENYLV 733
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 238 bits (607), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 217/388 (55%), Gaps = 2/388 (0%)
Query: 172 NGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLL 231
N ++N+VI +C++G + +A + + L+ PD +YST+++G C+ G +D+ L+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 232 DEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRK 291
+ M+ +G PN +++ +I LC+ L A + M +G +P+ V Y TL+DG C++
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 292 GKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIY 351
G + A +M + P+ +T+ ++ GF + G + + + +G + +
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 352 SSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKN 411
+ LI+G K G + A ++ M++ GC PN V Y+ LIDGLC+EG D A E L EM
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 412 KGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLME 471
G PN FTY+S++ G ++G+ +A+ + E + N + V Y+ L++ CK+G++ +
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 472 AMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNIL 531
A + K+ML +G++ +V ++ +++GFC +++ G KL N ML + + P+ T+N L
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK--GIAPNATTFNSL 602
Query: 532 LNAFYQQNNISRAMDVLNIMLDQGCDPD 559
+ + +NN+ A + M +G PD
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 211/440 (47%), Gaps = 3/440 (0%)
Query: 137 VKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVF 196
V S+++V+N + G + + V K ++PN + +I LC++ + +A E F
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLI-EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 197 RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
+ + PD+ Y+TL+DG CK G I A EM P+ + +IS C+
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 257 GDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTF 316
GD++ A KL M KG P+ VT+ L++G C+ G + A + N M+ C PN VT+
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 317 GTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMME 376
TL+ G K+G +L + + G + N + Y+S+++GL K G E A++L E
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 377 KGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHK 436
G +TV Y+ L+D C+ G+ D+A+E L EM KG P T++ LM GF G
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 437 AILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIH 496
+ M N ++ L+ C L A ++K M SRG+ D Y +++
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 497 GFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGC 556
G C A+ + + LF +M + V+TY++L+ F ++ A +V + M +G
Sbjct: 640 GHCKARNMKEAWFLFQEM--KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Query: 557 DPDFITCDIFLKTLRDNMNP 576
D D F T P
Sbjct: 698 AADKEIFDFFSDTKYKGKRP 717
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 233/489 (47%), Gaps = 45/489 (9%)
Query: 176 FNLVIKALCKVGLVDQAVEVFR--------------GIHLRNCAPDSYTYSTLMDGLCKE 221
F++ + L GL+ +A VF ++L + D Y +T
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT-------- 229
Query: 222 GRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTY 281
A+ + E G N +N++I +C+ G + A L+ M LKG P+ ++Y
Sbjct: 230 -----AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISY 284
Query: 282 NTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEE 341
+T+V+G CR G+L+K L+ M PN +G+++ + + ++ +
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 342 RGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADE 401
+G + +Y++LI G K G A + + EM + P+ + Y+A+I G C+ G E
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 402 AREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILIN 461
A + EM KG P+S T++ L+ G+ +AG A V M C+ N V Y+ LI+
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 462 GLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAEL 521
GLCK G L A + +M G++ ++ Y+S+++G C + +++ +KL + + A L
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF--EAAGL 522
Query: 522 QPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGR 581
D TY L++A+ + + +A ++L ML +G P +T ++ + + +DG
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH-GMLEDGE 581
Query: 582 EFLDELVVR-----------LVK----RQRTIGASKIIEVMLDRCLLPEASTWAIVVQQL 626
+ L+ ++ + LVK R A+ I + M R + P+ T+ +V+
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Query: 627 CKPRNIRKA 635
CK RN+++A
Sbjct: 642 CKARNMKEA 650
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 153/334 (45%), Gaps = 2/334 (0%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
L++ ++I D +L +M + F + Y KA + A + +
Sbjct: 387 LTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH 446
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
M + C V ++ ++++ + +EG A E + K + +QPN T+N ++ LCK
Sbjct: 447 M-IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK-IGLQPNIFTYNSIVNGLCKS 504
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
G +++AV++ D+ TY+TLMD CK G +D+A +L EM +G P F
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA 306
NVL++ C G L KL++ M KG PN T+N+LV C + L A ++ M +
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEH 366
P+ T+ LV G K + + ++ +G + YS LI G K KF
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 367 AMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
A +++ +M +G + ++ D + + D
Sbjct: 685 AREVFDQMRREGLAADKEIFDFFSDTKYKGKRPD 718
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 2/208 (0%)
Query: 103 NFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSH 162
+ + AY K+ +KA + M + + T+ +FN ++N G + +
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 163 VCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEG 222
+ I PN TFN ++K C + A +++ + R PD TY L+ G CK
Sbjct: 587 MLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
+ EA L EM+ +G + ++VLI K+ + A ++ D M +G ++ ++
Sbjct: 646 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCV 310
D + + + V +++++ N V
Sbjct: 706 FFSDTKYKGKRPDTIVDPIDEIIENYLV 733
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/424 (30%), Positives = 232/424 (54%), Gaps = 6/424 (1%)
Query: 103 NFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSH 162
+ V+ Y KA A+++ RM V ++N++L + G +A+E
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 163 VCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEG 222
+ + + P+ +T+ ++I+A C+ V A+++ + R C PD TY+ L++G+CKEG
Sbjct: 230 MLQR-DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
R+DEA+ L++M G PN N+++ ++C G + A KL+ +M KG P+ VT+N
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER 342
L++ LCRKG L +A+ +L +M + C PN +++ L+HGF K+ + L + R
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 343 GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
G + Y+++++ L K+GK E A+++ ++ KGC P + Y+ +IDGL + GK +A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 403 REYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILING 462
+ L EM+ K P++ TYSSL+ G G +AI + E + N V ++ ++ G
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Query: 463 LCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQ 522
LCK+ + A+ M++RG K + +Y+ +I G + + ++L N+ LC + ++
Sbjct: 529 LCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE-LCNKGLMK 587
Query: 523 PDVA 526
A
Sbjct: 588 KSSA 591
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 241/450 (53%), Gaps = 7/450 (1%)
Query: 106 VIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCK 165
+ + + + KA + +E + ++N +++ + G + AL V
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVI-TYNVMISGYCKAGEINNALS----VLD 196
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
+++ P+ +T+N ++++LC G + QA+EV + R+C PD TY+ L++ C++ +
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
A+ LLDEM+ G P+ +NVL++ +CK+G L A K +++M GC PN +T+N ++
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 286 DGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR 345
+C G+ A LL M+ P+ VTF L++ ++G +L + + G +
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 346 GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREY 405
N Y+ L+ G KE K + A++ + M+ +GC P+ V Y+ ++ LC++GK ++A E
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 406 LIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCK 465
L ++ +KG P TY++++ G +AG KAI + EM+ + + YS L+ GL +
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 466 NGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDV 525
GK+ EA+ + + GI+ + V ++S++ G C ++ D+ + M+ + +P+
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGC--KPNE 554
Query: 526 ATYNILLNAFYQQNNISRAMDVLNIMLDQG 555
+Y IL+ + A+++LN + ++G
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 218/419 (52%), Gaps = 26/419 (6%)
Query: 218 LCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPN 277
+ + G ++E L+ M G P+ LI C+ G +AAK+++ + G VP+
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 278 EVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLI 337
+TYN ++ G C+ G++N A+S+L++M + P+ VT+ T++ G+ VL
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 338 SLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREG 397
+ +R + Y+ LI ++ HAM+L EM ++GC P+ V Y+ L++G+C+EG
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 398 KADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYS 457
+ DEA ++L +M + G PN T++ ++R G A + +M + + V ++
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 458 ILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQ 517
ILIN LC+ G L A+ + ++M G + + ++Y+ ++HGFC + +D+ ++ +M+ +
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 518 EAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPP 577
PD+ TYN +L A + + A+++LN + +GC P IT + +
Sbjct: 409 GC--YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI---------- 456
Query: 578 QDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
DG L K +T A K+++ M + L P+ T++ +V L + + +AI
Sbjct: 457 -DG----------LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 240/479 (50%), Gaps = 20/479 (4%)
Query: 180 IKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGT 239
++ + + G +++ + + PD +TL+ G C+ G+ +A +L+ ++ G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 240 FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVS 299
P+ +NV+IS CK G++ A ++D MS+ P+ VTYNT++ LC GKL +A+
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAME 225
Query: 300 LLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
+L++M+ C P+ +T+ L+ + +L + +RG + Y+ L++G+
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 360 KEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSF 419
KEG+ + A++ +M GC+PN + ++ ++ +C G+ +A + L +M KG P+
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 420 TYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM 479
T++ L+ G +AI + ++M + C N + Y+ L++G CK K+ A+ ++M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 480 LSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQN 539
+SRG D+V Y++M+ C V+ +++ NQ+ P + TYN +++ +
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL--SSKGCSPVLITYNTVIDGLAKAG 463
Query: 540 NISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREF--------------LD 585
+A+ +L+ M + PD IT + L + + F +
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFN 523
Query: 586 ELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAISECWSRLC 644
+++ L K ++T A + M++R P +++ I+++ L ++A+ E + LC
Sbjct: 524 SIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL-ELLNELC 581
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 213/390 (54%), Gaps = 2/390 (0%)
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVS 229
QPN +TFN +I L +A+ + + + C PD TY +++GLCK G D A +
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 230 LLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
LL++M+ P ++N +I LCK + A L M KG PN VTY++L+ LC
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEY 349
G+ + A LL+ M+ K P+ TF L+ FVK+G+ + + + +R +
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
YSSLI+G + + A Q+++ M+ K C P+ V Y+ LI G C+ + +E E EM
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 410 KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKL 469
+G + N+ TY+ L++G F+AGDC A ++KEM ++ N + Y+ L++GLCKNGKL
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 470 MEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYN 529
+AM+V++ + ++ + Y+ MI G C A V+ G LF + + ++PDV YN
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK--GVKPDVVAYN 540
Query: 530 ILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
+++ F ++ + A + M + G P+
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPN 570
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 144/497 (28%), Positives = 249/497 (50%), Gaps = 28/497 (5%)
Query: 148 IQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPD 207
+ E A+ + + KS P+ + F+ ++ A+ K+ D + + + +
Sbjct: 57 LSELKLDDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHN 115
Query: 208 SYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVD 267
YTYS L++ C+ ++ A+++L +M G PN + L++ C + A LVD
Sbjct: 116 HYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVD 175
Query: 268 NMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQG 327
M + G PN VT+NTL+ GL K ++A++L+++MVA C P+ VT+G +V+G K+G
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 328 RASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYS 387
++L +E+ IY+++I GL K + A+ L+KEM KG PN V YS
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 388 ALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNN 447
+LI LC G+ +A L +M + P+ FT+S+L+ F + G +A ++ EM
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 448 SCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQG 507
S + + V YS LING C + +L EA +++ M+S+ DVV Y+++I GFC + V++G
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 508 MKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
M++F +M + L + TYNIL+ +Q + A ++ M+ G P+ +T + L
Sbjct: 416 MEVFREM--SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 568 KTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLC 627
DG L K + A + E + + P T+ I+++ +C
Sbjct: 474 -----------DG----------LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 628 KPRNIRKAISECWSRLC 644
K + W C
Sbjct: 513 KAGKVEDG----WDLFC 525
Score = 225 bits (574), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 139/453 (30%), Positives = 230/453 (50%), Gaps = 4/453 (0%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+ AV LF M + ++ F+ +L+ I + F + + ++L I N T++
Sbjct: 63 DDAVALFGEM-VKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM-QNLGIPHNHYTYS 120
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
++I C+ + A+ V + P+ T S+L++G C RI EAV+L+D+M +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G PN FN LI L A L+D M KGC P+ VTY +V+GLC++G + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
+LLN+M K P + + T++ G K D ++ +E +G R N YSSLIS
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
L G++ A +L +M+E+ P+ +SALID +EGK EA + EM + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
TYSSL+ GF +A +++ M + C + V Y+ LI G CK ++ E M V++
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 478 QMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQ 537
+M RG+ + V Y+ +I G A D ++F +M+ + P++ TYN LL+ +
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD--GVPPNIMTYNTLLDGLCK 478
Query: 538 QNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
+ +AM V + +P T +I ++ +
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 216/446 (48%), Gaps = 21/446 (4%)
Query: 208 SYTYSTLM--DGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKL 265
SY Y + +GL E ++D+AV+L EM FP+ F+ L+SA+ K L
Sbjct: 45 SYDYREKLSRNGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISL 103
Query: 266 VDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVK 325
+ M G N TY+ L++ CR+ +L A+++L +M+ PN VT +L++G+
Sbjct: 104 GEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH 163
Query: 326 QGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVV 385
R S+ +++ + G++ N +++LI GLF K AM L M+ KGC+P+ V
Sbjct: 164 SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVT 223
Query: 386 YSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMK 445
Y +++GLC+ G D A L +M+ P Y++++ G + A+ ++KEM+
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283
Query: 446 NNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVD 505
N V YS LI+ LC G+ +A + M+ R I DV +S++I F +
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 343
Query: 506 QGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDI 565
+ KL+++M+ + + P + TY+ L+N F + + A + M+ + C PD +T +
Sbjct: 344 EAEKLYDEMV--KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 566 FLKTLRDNMNPPQDGREFLDELVVR-LVKRQRTIG--------------ASKIIEVMLDR 610
+K ++G E E+ R LV T A +I + M+
Sbjct: 402 LIKGFC-KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 611 CLLPEASTWAIVVQQLCKPRNIRKAI 636
+ P T+ ++ LCK + KA+
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAM 486
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 188/380 (49%), Gaps = 5/380 (1%)
Query: 120 AVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLV 179
A NL ++ME + + V +N++++ + + H AL + + ++ I+PN +T++ +
Sbjct: 240 AFNLLNKME-QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM-ETKGIRPNVVTYSSL 297
Query: 180 IKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGT 239
I LC G A + + R PD +T+S L+D KEG++ EA L DEM
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 240 FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVS 299
P+ ++ LI+ C L A ++ + M K C P+ VTYNTL+ G C+ ++ + +
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 300 LLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
+ +M V N VT+ L+ G + G + + G N Y++L+ GL
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 360 KEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSF 419
K GK E AM +++ + EP Y+ +I+G+C+ GK ++ + + KG P+
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537
Query: 420 TYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM 479
Y++++ GF G +A ++KEMK + N CY+ LI ++G + + K+M
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Query: 480 LSRGIKLDVVA---YSSMIH 496
S G D ++M+H
Sbjct: 598 RSCGFAGDASTIGLVTNMLH 617
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 133/438 (30%), Positives = 236/438 (53%), Gaps = 4/438 (0%)
Query: 136 TVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEV 195
++ + NS+LN A+ + + + QP+ +TF ++ L + +AV +
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVE-MGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 196 FRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCK 255
+ ++ C PD TY +++GLCK G D A++LL++M+ + +++ +I +LCK
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 256 KGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVT 315
+ A L M KG P+ TY++L+ LC G+ + A LL+ M+ K PN VT
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 316 FGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM 375
F +L+ F K+G+ + + + +R N Y+SLI+G + + A Q++ M+
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 376 EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCH 435
K C P+ V Y+ LI+G C+ K + E +M +G + N+ TY++L+ GFF+A DC
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 436 KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
A +V+K+M ++ + N + Y+ L++GLCKNGKL +AM+V++ + ++ D+ Y+ M
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMS 492
Query: 496 HGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQG 555
G C A V+ G LF + + ++PDV YN +++ F ++ A + M + G
Sbjct: 493 EGMCKAGKVEDGWDLFCSLSLK--GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 556 CDPDFITCDIFLKT-LRD 572
PD T + ++ LRD
Sbjct: 551 PLPDSGTYNTLIRAHLRD 568
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 148/508 (29%), Positives = 259/508 (50%), Gaps = 6/508 (1%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
++AV+LF M + ++ F+ +L+ I + F + F + + L + N T+N
Sbjct: 47 DEAVDLFGEM-VKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKM-EILGVSHNLYTYN 104
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
++I LC+ + A+ + + P T ++L++G C RI EAV+L+D+M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G P+ F L+ L + A LV+ M +KGC P+ VTY +++GLC++G+ + A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
++LLN+M K + V + T++ K D ++ ++ +G R + + YSSLIS
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
L G++ A +L +M+E+ PN V +++LID +EGK EA + EM + PN
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
TY+SL+ GF +A ++ M + C + V Y+ LING CK K+++ M +++
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 478 QMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQ 537
M RG+ + V Y+++IHGF A D +F QM+ + P++ TYN LL+ +
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD--GVHPNIMTYNTLLDGLCK 462
Query: 538 QNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRT 597
+ +AM V + +PD T +I + + +DG + L ++ VK
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC-KAGKVEDGWDLFCSLSLKGVKPD-V 520
Query: 598 IGASKIIEVMLDRCLLPEASTWAIVVQQ 625
I + +I + L EA T I +++
Sbjct: 521 IAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 135/473 (28%), Positives = 241/473 (50%), Gaps = 26/473 (5%)
Query: 189 VDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNV 248
+D+AV++F + P +S L+ + K + D +S ++M+I G N + +N+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK 308
+I+ LC++ L A ++ M G P+ VT N+L++G C ++++AV+L++QMV
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 309 CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAM 368
P+ VTF TLVHG + +AS+ +++ + +G + + Y ++I+GL K G+ + A+
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 369 QLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGF 428
L +M + E + V+YS +ID LC+ D+A EM NKG P+ FTYSSL+
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
G A + +M N N V ++ LI+ K GKL+EA ++ +M+ R I ++
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 489 VAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL 548
V Y+S+I+GFC +D+ ++F M+ ++ PDV TYN L+N F + + M++
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDC--LPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 549 NIMLDQGCDPDFIT-------------CD----IFLKTLRDNMNPPQDGREFLDELVVRL 591
M +G + +T CD +F + + D ++P + L+ L
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP---NIMTYNTLLDGL 460
Query: 592 VKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAISECWSRLC 644
K + A + E + + P+ T+ I+ + +CK + W C
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG----WDLFC 509
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 198/385 (51%), Gaps = 9/385 (2%)
Query: 88 LLQQMKRERRVFIEKNFIV---IFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVL 144
LL +M++ + IE + ++ + + K + A+NLF M+ + + V +++S++
Sbjct: 227 LLNKMEKGK---IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK-GIRPDVFTYSSLI 282
Query: 145 NVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNC 204
+ + G + A S + + I PN +TFN +I A K G + +A ++F + R+
Sbjct: 283 SCLCNYGRWSDASRLLSDMLER-KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 205 APDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAK 264
P+ TY++L++G C R+DEA + M + P+ +N LI+ CK ++ +
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 265 LVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFV 324
L +MS +G V N VTY TL+ G + + A + QMV++ PN +T+ TL+ G
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 325 KQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTV 384
K G+ V L++ + Y Y+ + G+ K GK E L+ + KG +P+ +
Sbjct: 462 KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521
Query: 385 VYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEM 444
Y+ +I G C++G +EA I+MK G LP+S TY++L+R GD + + KEM
Sbjct: 522 AYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Query: 445 KNNSCNHNEVCYSILINGLCKNGKL 469
++ + Y L+ + +G+L
Sbjct: 582 RSCRFAGDASTYG-LVTDMLHDGRL 605
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 191/383 (49%), Gaps = 5/383 (1%)
Query: 117 PEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTF 176
P+ A+NL ++ME + + V +++V++ + + H AL ++ + + I+P+ T+
Sbjct: 221 PDLALNLLNKME-KGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM-DNKGIRPDVFTY 278
Query: 177 NLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQI 236
+ +I LC G A + + R P+ T+++L+D KEG++ EA L DEM
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 237 EGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNK 296
PN +N LI+ C L A ++ M K C+P+ VTYNTL++G C+ K+
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 297 AVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLIS 356
+ L M V N VT+ TL+HGF + + V + G N Y++L+
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 357 GLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLP 416
GL K GK E AM +++ + + EP+ Y+ + +G+C+ GK ++ + + KG P
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518
Query: 417 NSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVW 476
+ Y++++ GF + G +A ++ +MK + + Y+ LI ++G + +
Sbjct: 519 DVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 578
Query: 477 KQMLSRGIKLDVVAY---SSMIH 496
K+M S D Y + M+H
Sbjct: 579 KEMRSCRFAGDASTYGLVTDMLH 601
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 235 bits (599), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 161/611 (26%), Positives = 287/611 (46%), Gaps = 93/611 (15%)
Query: 119 KAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNL 178
+A + MEA C + +N +++ + ++ A+ + +++P+ +T+
Sbjct: 245 RAKEMIAHMEAT-GCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGK-DLKPDVVTYCT 302
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG 238
++ LCKV + +E+ + +P S+L++GL K G+I+EA++L+ + G
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAV 298
PN FV+N LI +LCK A L D M G PN+VTY+ L+D CR+GKL+ A+
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 299 SLLNQMVAN-----------------------------------KCVPNDVTFGTLVHGF 323
S L +MV K P VT+ +L+ G+
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482
Query: 324 VKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNT 383
+G+ + + + +G + Y +++L+SGLF+ G A++L+ EM E +PN
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 384 VVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKE 443
V Y+ +I+G C EG +A E+L EM KG +P++++Y L+ G G +A +
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602
Query: 444 MKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQL 503
+ +C NE+CY+ L++G C+ GKL EA+ V ++M+ RG+ LD+V Y +I G L
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG----SL 658
Query: 504 VDQGMKLFNQML--CQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFI 561
+ KLF +L + L+PD Y +++A + + A + ++M+++GC P+ +
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 562 TCDIFL------------KTLRDNMNPPQDGRE------FLDELVVRLVKRQRTI----- 598
T + + L M P FLD L V Q+ +
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNA 778
Query: 599 --------------------------GASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNI 632
AS++I M+ + P+ T+ ++ +LC+ ++
Sbjct: 779 ILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDV 838
Query: 633 RKAISECWSRL 643
+KAI E W+ +
Sbjct: 839 KKAI-ELWNSM 848
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/433 (30%), Positives = 221/433 (51%), Gaps = 17/433 (3%)
Query: 134 KQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAV 193
+ TV ++ S++ +G ++AL Y H I P+ TF ++ L + GL+ AV
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLY-HEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 194 EVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISAL 253
++F + N P+ TY+ +++G C+EG + +A L EM +G P+ + + LI L
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 254 CKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPND 313
C G A VD + C NE+ Y L+ G CR+GKL +A+S+ +MV +
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDL 647
Query: 314 VTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKE 373
V +G L+ G +K +L + +RG + ++ IY+S+I K G F+ A +W
Sbjct: 648 VCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDL 707
Query: 374 MMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSS----LMRGFF 429
M+ +GC PN V Y+A+I+GLC+ G +EA +M+ +PN TY L +G
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV 767
Query: 430 E---AGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKL 486
+ A + H AIL N Y++LI G C+ G++ EA + +M+ G+
Sbjct: 768 DMQKAVELHNAIL-------KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSP 820
Query: 487 DVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMD 546
D + Y++MI+ C V + ++L+N M E ++PD YN L++ + +A +
Sbjct: 821 DCITYTTMINELCRRNDVKKAIELWNSM--TEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878
Query: 547 VLNIMLDQGCDPD 559
+ N ML QG P+
Sbjct: 879 LRNEMLRQGLIPN 891
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 237/481 (49%), Gaps = 41/481 (8%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
E+A+NL R+ +F + +N++++ + + FH A + + K + ++PN +T++
Sbjct: 349 EEALNLVKRV-VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK-IGLRPNDVTYS 406
Query: 178 LVIKALCKVGLVDQAVE-----VFRGIHL------------------------------R 202
++I C+ G +D A+ V G+ L +
Sbjct: 407 ILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK 466
Query: 203 NCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRA 262
P TY++LM G C +G+I++A+ L EM +G P+ + F L+S L + G + A
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526
Query: 263 AKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHG 322
KL + M+ PN VTYN +++G C +G ++KA L +M VP+ ++ L+HG
Sbjct: 527 VKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHG 586
Query: 323 FVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPN 382
G+AS+ + L + NE Y+ L+ G +EGK E A+ + +EM+++G + +
Sbjct: 587 LCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLD 646
Query: 383 TVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWK 442
V Y LIDG + L EM ++G P+ Y+S++ + GD +A +W
Sbjct: 647 LVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWD 706
Query: 443 EMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQ 502
M N C NEV Y+ +INGLCK G + EA ++ +M + V Y + +
Sbjct: 707 LMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGE 766
Query: 503 L-VDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFI 561
+ + + ++L N +L L + ATYN+L+ F +Q I A +++ M+ G PD I
Sbjct: 767 VDMQKAVELHNAIL---KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCI 823
Query: 562 T 562
T
Sbjct: 824 T 824
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 186/383 (48%), Gaps = 4/383 (1%)
Query: 103 NFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSH 162
F + +A AV LF+ M AE++ K ++N ++ +EG +A EF
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEM-AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
Query: 163 VCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEG 222
+ + I P+ ++ +I LC G +A G+H NC + Y+ L+ G C+EG
Sbjct: 568 MTEK-GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREG 626
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
+++EA+S+ EM G + + VLI K D L+ M +G P++V Y
Sbjct: 627 KLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYT 686
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER 342
+++D + G +A + + M+ CVPN+VT+ +++G K G ++ + ++
Sbjct: 687 SMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPV 746
Query: 343 GHRGNEYIYSSLISGLFK-EGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADE 401
N+ Y + L K E + A++L ++ KG NT Y+ LI G CR+G+ +E
Sbjct: 747 SSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEE 805
Query: 402 AREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILIN 461
A E + M G P+ TY++++ D KAI +W M + V Y+ LI+
Sbjct: 806 ASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIH 865
Query: 462 GLCKNGKLMEAMMVWKQMLSRGI 484
G C G++ +A + +ML +G+
Sbjct: 866 GCCVAGEMGKATELRNEMLRQGL 888
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 138/308 (44%), Gaps = 44/308 (14%)
Query: 49 AEIFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIF 108
A++F G HK G+ +L ++ + L+ + Q+M +R V ++ +V +
Sbjct: 596 AKVFVDGLHK-GNCELNEICYTGLLHGFCREGKLEEALSVCQEMV-QRGVDLD---LVCY 650
Query: 109 KAYGKAHFPEKAVNLFHRMEAEFH---CKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCK 165
K LF + E H K + S+++ + G F A + +
Sbjct: 651 GVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN 710
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQA------------------------------VEV 195
PN +T+ VI LCK G V++A V++
Sbjct: 711 E-GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDM 769
Query: 196 FRGIHLRNCA-----PDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLI 250
+ + L N ++ TY+ L+ G C++GRI+EA L+ M +G P+ + +I
Sbjct: 770 QKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMI 829
Query: 251 SALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCV 310
+ LC++ D+ +A +L ++M+ KG P+ V YNTL+ G C G++ KA L N+M+ +
Sbjct: 830 NELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889
Query: 311 PNDVTFGT 318
PN+ T T
Sbjct: 890 PNNKTSRT 897
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 85/174 (48%), Gaps = 24/174 (13%)
Query: 456 YSILINGLCKNGKLMEAMMVWKQMLSR-GIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
+ +LI ++ ++++ ++V+K M+++ + +V S+++HG + M+LFN M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 515 LCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNM 574
+ ++PDV Y ++ + + ++SRA +++ M GCD + + ++ +
Sbjct: 219 V--SVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLI------- 269
Query: 575 NPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCK 628
DG L K+Q+ A I + + + L P+ T+ +V LCK
Sbjct: 270 ----DG----------LCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 235 bits (599), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 144/453 (31%), Positives = 237/453 (52%), Gaps = 4/453 (0%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+ A+ LF M A+ ++ F+ +L+ I + F + F + + L I N T+N
Sbjct: 60 DDAIGLFGVM-AQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKM-EILGISHNLYTYN 117
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
++I C+ + A+ + + PD T ++L++G C RI +AV+L+D+M
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G P+ F LI L A L+D M +GC P+ VTY +V+GLC++G + A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
++LLN+M A K N V + T++ K D ++ +E +G R N YSSLIS
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
L G++ A +L +M+E+ PN V +SALID ++GK +A + EM + PN
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
FTYSSL+ GF +A + + M C N V Y+ LING CK ++ + M +++
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Query: 478 QMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQ 537
+M RG+ + V Y+++IHGF A+ D +F QM+ + P++ TYNILL+ +
Sbjct: 418 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV--SVGVHPNILTYNILLDGLCK 475
Query: 538 QNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
+++AM V + +PD T +I ++ +
Sbjct: 476 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 508
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 200/365 (54%), Gaps = 1/365 (0%)
Query: 137 VKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVF 196
+ + NS+LN A+ + + + +P+ +TF +I L +AV +
Sbjct: 148 IVTLNSLLNGFCHGNRISDAVALVDQMVE-MGYKPDTVTFTTLIHGLFLHNKASEAVALI 206
Query: 197 RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
+ R C PD TY +++GLCK G D A++LL++M+ N +++ +I +LCK
Sbjct: 207 DRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKY 266
Query: 257 GDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTF 316
A L M KG PN +TY++L+ LC G+ + A LL+ M+ K PN VTF
Sbjct: 267 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTF 326
Query: 317 GTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMME 376
L+ FVK+G+ + + +R N + YSSLI+G + A Q+ + M+
Sbjct: 327 SALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 386
Query: 377 KGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHK 436
K C PN V Y+ LI+G C+ + D+ E EM +G + N+ TY++L+ GFF+A DC
Sbjct: 387 KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 446
Query: 437 AILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIH 496
A +V+K+M + + N + Y+IL++GLCKNGKL +AM+V++ + ++ D+ Y+ MI
Sbjct: 447 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 506
Query: 497 GFCNA 501
G C A
Sbjct: 507 GMCKA 511
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 228/475 (48%), Gaps = 58/475 (12%)
Query: 189 VDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNV 248
+D A+ +F + P +S L+ + K + D +S ++M+I G N + +N+
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK 308
LI+ C+ L A L+ M G P+ VT N+L++G C +++ AV+L++QMV
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 309 CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAM 368
P+ VTF TL+HG +AS+ +++ + +RG + + Y ++++GL K G + A+
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 369 QLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMR-- 426
L +M E N V+YS +ID LC+ D+A EM+NKG PN TYSSL+
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 427 ---------------------------------GFFEAGDCHKAILVWKEMKNNSCNHNE 453
F + G KA +++EM S + N
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 454 VCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQ 513
YS LING C +L EA + + M+ + +VV Y+++I+GFC A+ VD+GM+LF +
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418
Query: 514 MLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDN 573
M + L + TY L++ F+Q + A V M+ G P+ +T +I L
Sbjct: 419 M--SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL------ 470
Query: 574 MNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCK 628
DG L K + A + E + + P+ T+ I+++ +CK
Sbjct: 471 -----DG----------LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 171/315 (54%), Gaps = 2/315 (0%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+AV L RM + C+ + ++ +V+N + + G AL + + ++ I+ N + ++
Sbjct: 200 SEAVALIDRM-VQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM-EAAKIEANVVIYS 257
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
VI +LCK D A+ +F + + P+ TYS+L+ LC GR +A LL +M
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
PN F+ LI A KKG L++A KL + M + PN TY++L++G C +L +A
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
+L M+ C+PN VT+ TL++GF K R G + + +RG GN Y++LI G
Sbjct: 378 KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
F+ ++A ++K+M+ G PN + Y+ L+DGLC+ GK +A ++ P+
Sbjct: 438 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497
Query: 418 SFTYSSLMRGFFEAG 432
+TY+ ++ G +AG
Sbjct: 498 IYTYNIMIEGMCKAG 512
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 162/299 (54%)
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVS 229
QP+ +T+ V+ LCK G D A+ + + + YST++D LCK D+A++
Sbjct: 215 QPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 274
Query: 230 LLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
L EM+ +G PN ++ LIS LC G A++L+ +M + PN VT++ L+D
Sbjct: 275 LFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFV 334
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEY 349
+KGKL KA L +M+ PN T+ +L++GF R + +L + + N
Sbjct: 335 KKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVV 394
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
Y++LI+G K + + M+L++EM ++G NTV Y+ LI G + D A+ +M
Sbjct: 395 TYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 454
Query: 410 KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGK 468
+ G PN TY+ L+ G + G KA++V++ ++ ++ + Y+I+I G+CK GK
Sbjct: 455 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 175/342 (51%), Gaps = 12/342 (3%)
Query: 62 YKLGDLSFYSLIEKL----AASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFP 117
YK ++F +LI L AS A ++ ++Q+ + V + + K
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLV----TYGAVVNGLCKRGDT 234
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+ A+NL ++MEA + V +++V++ + + H AL ++ + ++ ++PN +T++
Sbjct: 235 DLALNLLNKMEAA-KIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYS 292
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
+I LC G A + + R P+ T+S L+D K+G++ +A L +EM
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
PN F ++ LI+ C L A ++++ M K C+PN VTYNTL++G C+ +++K
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKG 412
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGAS-VLISLEERGHRGNEYIYSSLIS 356
+ L +M V N VT+ TL+HGF Q R D A V + G N Y+ L+
Sbjct: 413 MELFREMSQRGLVGNTVTYTTLIHGFF-QARDCDNAQMVFKQMVSVGVHPNILTYNILLD 471
Query: 357 GLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGK 398
GL K GK AM +++ + EP+ Y+ +I+G+C+ GK
Sbjct: 472 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 151/302 (50%), Gaps = 8/302 (2%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIV---IFKAYGKAHFPEKAVNL 123
+++ +++ L D LL +M+ + IE N ++ + + K + A+NL
Sbjct: 219 VTYGAVVNGLCKRGDTDLALNLLNKMEAAK---IEANVVIYSTVIDSLCKYRHEDDALNL 275
Query: 124 FHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKAL 183
F ME + + V +++S+++ + G + A S + + I PN +TF+ +I A
Sbjct: 276 FTEMENK-GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER-KINPNLVTFSALIDAF 333
Query: 184 CKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNP 243
K G + +A +++ + R+ P+ +TYS+L++G C R+ EA +L+ M + PN
Sbjct: 334 VKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNV 393
Query: 244 FVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQ 303
+N LI+ CK + + +L MS +G V N VTY TL+ G + + A + Q
Sbjct: 394 VTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 453
Query: 304 MVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGK 363
MV+ PN +T+ L+ G K G+ + V L+ + Y Y+ +I G+ K GK
Sbjct: 454 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Query: 364 FE 365
++
Sbjct: 514 WK 515
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 103/200 (51%), Gaps = 1/200 (0%)
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRG 198
+F+++++ +++G +A + Y + K +I PN T++ +I C + + +A ++
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKR-SIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383
Query: 199 IHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGD 258
+ ++C P+ TY+TL++G CK R+D+ + L EM G N + LI + D
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 443
Query: 259 LIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
A + M G PN +TYN L+DGLC+ GKL KA+ + + + P+ T+
Sbjct: 444 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 503
Query: 319 LVHGFVKQGRASDGASVLIS 338
++ G K G+ G ++
Sbjct: 504 MIEGMCKAGKWKMGGIYFVA 523
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/426 (31%), Positives = 229/426 (53%), Gaps = 3/426 (0%)
Query: 134 KQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAV 193
+ ++ + +S+LN A+ + + + +P+ +TF +I L +AV
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVE-MGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 194 EVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISAL 253
+ + R C P+ TY +++GLCK G ID A +LL++M+ N +++ +I +L
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Query: 254 CKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPND 313
CK A L M KG PN +TY++L+ LC + + A LL+ M+ K PN
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330
Query: 314 VTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKE 373
VTF L+ FVK+G+ + + + +R + + YSSLI+G + + A +++
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390
Query: 374 MMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGD 433
M+ K C PN V Y+ LI+G C+ + DE E EM +G + N+ TY++L+ GFF+A D
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Query: 434 CHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSS 493
C A +V+K+M ++ + N + Y+ L++GLCKNGKL +AM+V++ + ++ + Y+
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 510
Query: 494 MIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLD 553
MI G C A V+ G LF + + ++PDV YN +++ F ++ A + M +
Sbjct: 511 MIEGMCKAGKVEDGWDLFCSLSLK--GVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
Query: 554 QGCDPD 559
G PD
Sbjct: 569 DGPLPD 574
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 142/453 (31%), Positives = 232/453 (51%), Gaps = 4/453 (0%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+ A+ LF M + ++ FN +L+ I + F + + + L I N T+N
Sbjct: 67 DDAIGLFGGM-VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNLYTYN 124
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
++I C+ + A+ + + P T S+L++G C RI +AV+L+D+M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G P+ F LI L A LVD M +GC PN VTY +V+GLC++G ++ A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
+LLN+M A K N V + T++ K D ++ +E +G R N YSSLIS
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
L ++ A +L +M+E+ PN V ++ALID +EGK EA + EM + P+
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
FTYSSL+ GF +A +++ M + C N V Y+ LING CK ++ E + +++
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 478 QMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQ 537
+M RG+ + V Y+++IHGF A+ D +F QM+ + P++ TYN LL+ +
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD--GVHPNIMTYNTLLDGLCK 482
Query: 538 QNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
+ +AM V + +P T +I ++ +
Sbjct: 483 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 232/473 (49%), Gaps = 26/473 (5%)
Query: 189 VDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNV 248
+D A+ +F G+ P + ++ L+ + K + D +SL ++MQ G N + +N+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK 308
LI+ C++ + A L+ M G P+ VT ++L++G C +++ AV+L++QMV
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 309 CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAM 368
P+ +TF TL+HG +AS+ +++ + +RG + N Y +++GL K G + A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 369 QLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGF 428
L +M E N V+YS +ID LC+ D+A EM+NKG PN TYSSL+
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
A + +M N N V ++ LI+ K GKL+EA ++ +M+ R I D+
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 489 VAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL 548
YSS+I+GFC +D+ +F M+ ++ P+V TYN L+N F + I +++
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDC--FPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 549 NIMLDQGCDPDFIT-------------CD----IFLKTLRDNMNPPQDGREFLDELVVRL 591
M +G + +T CD +F + + D ++P + L+ L
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP---NIMTYNTLLDGL 480
Query: 592 VKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAISECWSRLC 644
K + A + E + + P T+ I+++ +CK + W C
Sbjct: 481 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG----WDLFC 529
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 179/357 (50%), Gaps = 8/357 (2%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIV---IFKAYGKAHFPEKAVNL 123
+++ ++ L D LL +M+ + IE N ++ + + K + A+NL
Sbjct: 226 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAK---IEANVVIYSTVIDSLCKYRHEDDALNL 282
Query: 124 FHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKAL 183
F ME + + V +++S+++ + + A S + + I PN +TFN +I A
Sbjct: 283 FTEMENK-GVRPNVITYSSLISCLCNYERWSDASRLLSDMIER-KINPNVVTFNALIDAF 340
Query: 184 CKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNP 243
K G + +A +++ + R+ PD +TYS+L++G C R+DEA + + M + FPN
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400
Query: 244 FVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQ 303
+N LI+ CK + +L MS +G V N VTY TL+ G + + A + Q
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 304 MVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGK 363
MV++ PN +T+ TL+ G K G+ V L+ Y Y+ +I G+ K GK
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Query: 364 FEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFT 420
E L+ + KG +P+ ++Y+ +I G CR+G +EA +M+ G LP+S T
Sbjct: 521 VEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/568 (26%), Positives = 268/568 (47%), Gaps = 26/568 (4%)
Query: 69 FYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRME 128
F +LI A S LL +MK + V ++GK + A FH +E
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 129 AEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGL 188
A K ++ S++ V+ + A+E + H+ K+ + P +N +I G
Sbjct: 266 AN-GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV-PCTYAYNTMIMGYGSAGK 323
Query: 189 VDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNV 248
D+A + + P Y+ ++ L K G++DEA+ + +EM+ + PN +N+
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNI 382
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK 308
LI LC+ G L A +L D+M G PN T N +VD LC+ KL++A ++ +M
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442
Query: 309 CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAM 368
C P+++TF +L+ G K GR D V + + R N +Y+SLI F G+ E
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 369 QLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGF 428
+++K+M+ + C P+ + + +D + + G+ ++ R E+K + +P++ +YS L+ G
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
+AG ++ ++ MK C + Y+I+I+G CK GK+ +A + ++M ++G + V
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 489 VAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL 548
V Y S+I G +D+ LF + + EL +V Y+ L++ F + I A +L
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL--NVVIYSSLIDGFGKVGRIDEAYLIL 680
Query: 549 NIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVML 608
++ +G P+ T + L L VK + A + M
Sbjct: 681 EELMQKGLTPNLYTWNSLLDAL---------------------VKAEEINEALVCFQSMK 719
Query: 609 DRCLLPEASTWAIVVQQLCKPRNIRKAI 636
+ P T+ I++ LCK R KA
Sbjct: 720 ELKCTPNQVTYGILINGLCKVRKFNKAF 747
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 154/582 (26%), Positives = 272/582 (46%), Gaps = 77/582 (13%)
Query: 63 KLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVN 122
K ++++ S+I L ++ E+ + +++ RRV + + YG A ++A +
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 329
Query: 123 LFHRMEAE--------FHCKQT-------------------------VKSFNSVLNVIIQ 149
L R A+ ++C T + ++N +++++ +
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCR 389
Query: 150 EGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSY 209
G A E + K+ + PN T N+++ LCK +D+A +F + + C PD
Sbjct: 390 AGKLDTAFELRDSMQKA-GLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448
Query: 210 TYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNM 269
T+ +L+DGL K GR+D+A + ++M N V+ LI G K+ +M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 270 SLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRA 329
+ C P+ NT +D + + G+ K ++ ++ A + VP+ ++ L+HG +K G A
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568
Query: 330 SDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEP-------- 381
++ + S++E+G + Y+ +I G K GK A QL +EM KG EP
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 382 ---------------------------NTVVYSALIDGLCREGKADEAREYLIEMKNKGH 414
N V+YS+LIDG + G+ DEA L E+ KG
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Query: 415 LPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMM 474
PN +T++SL+ +A + ++A++ ++ MK C N+V Y ILINGLCK K +A +
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFV 748
Query: 475 VWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNA 534
W++M +G+K ++Y++MI G A + + LF++ PD A YN ++
Sbjct: 749 FWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGG--VPDSACYNAMIEG 806
Query: 535 FYQQNNISRAMDVLNIMLD---QGCDPDFITCDIFLKTLRDN 573
+N +RAMD ++ + +G TC + L TL N
Sbjct: 807 L---SNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKN 845
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 191/373 (51%), Gaps = 3/373 (0%)
Query: 165 KSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRI 224
+ +P + +I A V D + +F+ + P + ++TL+ G KEGR+
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 225 DEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTL 284
D A+SLLDEM+ + ++NV I + K G + A K + G P+EVTY ++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 285 VDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGH 344
+ LC+ +L++AV + + N+ VP + T++ G+ G+ + S+L +G
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 345 RGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE 404
+ Y+ +++ L K GK + A+++++E M+K PN Y+ LID LCR GK D A E
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEE-MKKDAAPNLSTYNILIDMLCRAGKLDTAFE 398
Query: 405 YLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLC 464
M+ G PN T + ++ ++ +A +++EM C +E+ + LI+GL
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458
Query: 465 KNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPD 524
K G++ +A V+++ML + + + Y+S+I F N + G K++ M+ Q PD
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC--SPD 516
Query: 525 VATYNILLNAFYQ 537
+ N ++ ++
Sbjct: 517 LQLLNTYMDCMFK 529
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 176/353 (49%), Gaps = 3/353 (0%)
Query: 132 HCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQ 191
+C ++ N+ ++ + + G + + + K+ P+ +++++I L K G ++
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI-KARRFVPDARSYSILIHGLIKAGFANE 570
Query: 192 AVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLIS 251
E+F + + C D+ Y+ ++DG CK G++++A LL+EM+ +G P + +I
Sbjct: 571 TYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630
Query: 252 ALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVP 311
L K L A L + K N V Y++L+DG + G++++A +L +++ P
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 690
Query: 312 NDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLW 371
N T+ +L+ VK ++ S++E N+ Y LI+GL K KF A W
Sbjct: 691 NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750
Query: 372 KEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEA 431
+EM ++G +P+T+ Y+ +I GL + G EA K G +P+S Y++++ G
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNG 810
Query: 432 GDCHKAILVWKEMKNNSCN-HNEVCYSILINGLCKNGKLMEAMMVWKQMLSRG 483
A +++E + HN+ C +L++ L KN L +A +V + G
Sbjct: 811 NRAMDAFSLFEETRRRGLPIHNKTCV-VLLDTLHKNDCLEQAAIVGAVLRETG 862
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 197/433 (45%), Gaps = 20/433 (4%)
Query: 134 KQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAV 193
+QTV N + NV+ + G + + E + +L+ +P VI L ++ V++A+
Sbjct: 33 RQTV---NDICNVL-ETGPWGPSAE---NTLSALSFKPQP---EFVIGVLRRLKDVNRAI 82
Query: 194 EVFRGIHLR----NCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVL 249
E FR R +C P+SY L+ C+ D +L EM + G P+ +
Sbjct: 83 EYFRWYERRTELPHC-PESYNSLLLVMARCRN--FDALDQILGEMSVAGFGPSVNTCIEM 139
Query: 250 ISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC 309
+ K L +V M P Y TL+ + ++L QM
Sbjct: 140 VLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGY 199
Query: 310 VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
P F TL+ GF K+GR S+L ++ + +Y+ I K GK + A +
Sbjct: 200 EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWK 259
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF 429
+ E+ G +P+ V Y+++I LC+ + DEA E ++ +P ++ Y++++ G+
Sbjct: 260 FFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYG 319
Query: 430 EAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVV 489
AG +A + + + + + Y+ ++ L K GK+ EA+ V+++M + ++
Sbjct: 320 SAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLS 378
Query: 490 AYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLN 549
Y+ +I C A +D +L + M Q+A L P+V T NI+++ + + A +
Sbjct: 379 TYNILIDMLCRAGKLDTAFELRDSM--QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 436
Query: 550 IMLDQGCDPDFIT 562
M + C PD IT
Sbjct: 437 EMDYKVCTPDEIT 449
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 178/388 (45%), Gaps = 26/388 (6%)
Query: 241 PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSL 300
P + +L+ A C+ D + +++ MS+ G P+ T +V G + KL + +
Sbjct: 98 PESYNSLLLVMARCRNFDALD--QILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDV 155
Query: 301 LNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFK 360
+ M K P + TL+ F + ++ ++E G+ +++++LI G K
Sbjct: 156 VQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAK 215
Query: 361 EGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFT 420
EG+ + A+ L EM + + V+Y+ ID + GK D A ++ E++ G P+ T
Sbjct: 216 EGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVT 275
Query: 421 YSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQML 480
Y+S++ +A +A+ +++ ++ N Y+ +I G GK EA + ++
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 481 SRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNN 540
++G V+AY+ ++ VD+ +K+F +M + + P+++TYNIL++ +
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM---KKDAAPNLSTYNILIDMLCRAGK 392
Query: 541 ISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGA 600
+ A ++ + M G P+ T +I +V RL K Q+ A
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNI---------------------MVDRLCKSQKLDEA 431
Query: 601 SKIIEVMLDRCLLPEASTWAIVVQQLCK 628
+ E M + P+ T+ ++ L K
Sbjct: 432 CAMFEEMDYKVCTPDEITFCSLIDGLGK 459
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 141/492 (28%), Positives = 249/492 (50%), Gaps = 20/492 (4%)
Query: 161 SHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCK 220
S +CK L P T++++I LCK+ ++ A + + + D++TYS L+DGL K
Sbjct: 267 SMICKGL--VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324
Query: 221 EGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVT 280
D A L+ EM G P++++ I + K+G + +A L D M G +P
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384
Query: 281 YNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLE 340
Y +L++G CR+ + + LL +M V + T+GT+V G G +++ +
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 341 ERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
G R N IY++LI + +F AM++ KEM E+G P+ Y++LI GL + + D
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 401 EAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILI 460
EAR +L+EM G PN+FTY + + G+ EA + A KEM+ N+V + LI
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 461 NGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAE 520
N CK GK++EA ++ M+ +GI D Y+ +++G VD ++F +M +
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM--RGKG 622
Query: 521 LQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDG 580
+ PDV +Y +L+N F + N+ +A + + M+++G P+ I ++ L + +
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS-GEIEKA 681
Query: 581 REFLDELVVR---------------LVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQ 625
+E LDE+ V+ K A ++ + M + L+P++ + +V
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Query: 626 LCKPRNIRKAIS 637
C+ ++ +AI+
Sbjct: 742 CCRLNDVERAIT 753
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 160/589 (27%), Positives = 261/589 (44%), Gaps = 28/589 (4%)
Query: 68 SFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRM 127
++ SLIE + ELL +MK+ V + + K + + A N+ M
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443
Query: 128 EAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVG 187
A C+ V + +++ +Q F A+ + K I P+ +N +I L K
Sbjct: 444 IAS-GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM-KEQGIAPDIFCYNSLIIGLSKAK 501
Query: 188 LVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFN 247
+D+A + P+++TY + G + A + EM+ G PN +
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT 561
Query: 248 VLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVAN 307
LI+ CKKG +I A +M +G + + TY L++GL + K++ A + +M
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621
Query: 308 KCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHA 367
P+ ++G L++GF K G +S+ + E G N IY+ L+ G + G+ E A
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 368 MQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRG 427
+L EM KG PN V Y +IDG C+ G EA EMK KG +P+SF Y++L+ G
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Query: 428 FFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLS----RG 483
D +AI ++ K C + ++ LIN + K GK V +++ R
Sbjct: 742 CCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF 800
Query: 484 IKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISR 543
K + V Y+ MI C ++ +LF+QM Q A L P V TY LLN + + +
Sbjct: 801 GKPNDVTYNIMIDYLCKEGNLEAAKELFHQM--QNANLMPTVITYTSLLNGYDKMGRRAE 858
Query: 544 AMDVLNIMLDQGCDPDFITCDI----FLK--------TLRDNM---NPPQDGREFLDELV 588
V + + G +PD I + FLK L D M N DG +
Sbjct: 859 MFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTC 918
Query: 589 VRLVKRQRTIG----ASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIR 633
L+ +G A K++E M+ +P+++T ++ + C N R
Sbjct: 919 RALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967
Score = 192 bits (488), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 219/459 (47%), Gaps = 13/459 (2%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
EKA LF M A Q +++ S++ +E + + E + K NI + T+
Sbjct: 364 EKAKALFDGMIASGLIPQA-QAYASLIEGYCREKNVRQGYELLVEM-KKRNIVISPYTYG 421
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
V+K +C G +D A + + + C P+ Y+TL+ + R +A+ +L EM+ +
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G P+ F +N LI L K + A + M G PN TY + G + A
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
+ +M +PN V L++ + K+G+ + S S+ ++G G+ Y+ L++G
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
LFK K + A ++++EM KG P+ Y LI+G + G +A EM +G PN
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
Y+ L+ GF +G+ KA + EM + N V Y +I+G CK+G L EA ++
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 478 QMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLF--NQMLCQEAELQPDVATYNILLNAF 535
+M +G+ D Y++++ G C V++ + +F N+ C + A +N L+N
Sbjct: 722 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASS-----TAPFNALINWV 776
Query: 536 YQQNNISRAMDVLNIMLDQGCD----PDFITCDIFLKTL 570
++ +VLN ++D D P+ +T +I + L
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYL 815
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 156/615 (25%), Positives = 275/615 (44%), Gaps = 73/615 (11%)
Query: 68 SFYSLIEKLA-ASSDFASLEELLQQMKRERRVF----IEKNFIVIFKAY--GKAHFPEKA 120
SF +EKL+ AS++ A + L Q+ R+ V IE N V+ + P K
Sbjct: 23 SFSVNVEKLSDASAEIAGI--LKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKL 80
Query: 121 VNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRAL--------------EFYSHVCKS 166
++ F+ ++++ +Q + SF+ + + G F +AL E +S + +
Sbjct: 81 LSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRC 140
Query: 167 ----LNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEG 222
+ +G+ F ++ G +++AV VF P L+D L +
Sbjct: 141 SQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWN 200
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDL-------------IRAA------ 263
R+D + M + +++LI A C+ G++ R A
Sbjct: 201 RLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDG 260
Query: 264 --KLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVH 321
KL ++M KG VP + TY+ L+DGLC+ +L A SLL +M + ++ T+ L+
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 322 GFVKQGRASDGASVLI-SLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCE 380
G +K GR +D A L+ + G Y+Y I + KEG E A L+ M+ G
Sbjct: 321 GLLK-GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI 379
Query: 381 PNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILV 440
P Y++LI+G CRE + E L+EMK + + + +TY ++++G +GD A +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 441 WKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCN 500
KEM + C N V Y+ LI +N + +AM V K+M +GI D+ Y+S+I G
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 501 AQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDF 560
A+ +D+ +M+ E L+P+ TY ++ + + + + A + M + G P+
Sbjct: 500 AKRMDEARSFLVEMV--ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Query: 561 ITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWA 620
+ C L+ K+ + I A M+D+ +L +A T+
Sbjct: 558 VLC---------------------TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 621 IVVQQLCKPRNIRKA 635
+++ L K + A
Sbjct: 597 VLMNGLFKNDKVDDA 611
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 126/263 (47%), Gaps = 10/263 (3%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
+++ ++I+ S D A L +MK + V + + + + E+A+ +F
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 757
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCK-SLNI--QPNGLTFNLVIKAL 183
+ C + FN+++N + + G E + + S + +PN +T+N++I L
Sbjct: 758 NKK--GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYL 815
Query: 184 CKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNP 243
CK G ++ A E+F + N P TY++L++G K GR E + DE G P+
Sbjct: 816 CKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDH 875
Query: 244 FVFNVLISALCKKGDLIRAAKLVDNMSLK-----GCVPNEVTYNTLVDGLCRKGKLNKAV 298
+++V+I+A K+G +A LVD M K GC + T L+ G + G++ A
Sbjct: 876 IMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAE 935
Query: 299 SLLNQMVANKCVPNDVTFGTLVH 321
++ MV + +P+ T L++
Sbjct: 936 KVMENMVRLQYIPDSATVIELIN 958
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 227/413 (54%), Gaps = 3/413 (0%)
Query: 137 VKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVF 196
V ++N+++N + A + +S + P+ +T+N++I +LC G +D A++V
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRM-RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 197 RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
+ NC P TY+ L++ EG +DEA+ L+DEM G P+ F +N +I +CK+
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 257 GDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTF 316
G + RA ++V N+ LKGC P+ ++YN L+ L +GK + L+ +M + KC PN VT+
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 317 GTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMME 376
L+ + G+ + ++L ++E+G + Y Y LI+ +EG+ + A++ + M+
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 377 KGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHK 436
GC P+ V Y+ ++ LC+ GKAD+A E ++ G PNS +Y+++ + +GD +
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 437 AILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIH 496
A+ + EM +N + +E+ Y+ +I+ LC+ G + EA + M S VV Y+ ++
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Query: 497 GFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLN 549
GFC A ++ + + M+ +P+ TY +L+ + AM++ N
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGC--RPNETTYTVLIEGIGFAGYRAEAMELAN 567
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 214/399 (53%), Gaps = 2/399 (0%)
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVS 229
QP+ +N +I CK+ +D A V + ++ +PD+ TY+ ++ LC G++D A+
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 230 LLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
+L+++ + P + +LI A +G + A KL+D M +G P+ TYNT++ G+C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEY 349
++G +++A ++ + C P+ +++ L+ + QG+ +G ++ + N
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
YS LI+ L ++GK E AM L K M EKG P+ Y LI CREG+ D A E+L M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 410 KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKL 469
+ G LP+ Y++++ + G +A+ ++ ++ C+ N Y+ + + L +G
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 470 MEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYN 529
+ A+ + +M+S GI D + Y+SMI C +VD+ +L M + E P V TYN
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM--RSCEFHPSVVTYN 512
Query: 530 ILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLK 568
I+L F + + I A++VL M+ GC P+ T + ++
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 208/420 (49%), Gaps = 41/420 (9%)
Query: 106 VIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCK 165
+ + K + + A + RM ++ TV ++N ++ + G AL+ + +
Sbjct: 163 ALINGFCKMNRIDDATRVLDRMRSKDFSPDTV-TYNIMIGSLCSRGKLDLALKVLNQLL- 220
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
S N QP +T+ ++I+A G VD+A+++ + R PD +TY+T++ G+CKEG +D
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 226 EAVSLLDEMQIEG-----------------------------------TFPNPFVFNVLI 250
A ++ ++++G PN +++LI
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 251 SALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCV 310
+ LC+ G + A L+ M KG P+ +Y+ L+ CR+G+L+ A+ L M+++ C+
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Query: 311 PNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQL 370
P+ V + T++ K G+A + L E G N Y+++ S L+ G A+ +
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460
Query: 371 WKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFE 430
EMM G +P+ + Y+++I LCREG DEA E L++M++ P+ TY+ ++ GF +
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCK 520
Query: 431 AGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVA 490
A AI V + M N C NE Y++LI G+ G EAM + + +++D ++
Sbjct: 521 AHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL----VRIDAIS 576
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 224/456 (49%), Gaps = 28/456 (6%)
Query: 184 CKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNP 243
C+ G +++ + + + PD + L+ G I +AV +++ ++ G P+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDV 158
Query: 244 FVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQ 303
F +N LI+ CK + A +++D M K P+ VTYN ++ LC +GKL+ A+ +LNQ
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 304 MVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGK 363
++++ C P +T+ L+ + +G + ++ + RG + + + Y+++I G+ KEG
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 364 FEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSS 423
+ A ++ + + KGCEP+ + Y+ L+ L +GK +E + + +M ++ PN TYS
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 424 LMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRG 483
L+ G +A+ + K MK + Y LI C+ G+L A+ + M+S G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 484 IKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISR 543
D+V Y++++ C DQ +++F ++ E P+ ++YN + +A + + R
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKL--GEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 544 AMDVLNIMLDQGCDPDFITCDIFLKTL-RDNMNPPQDGREFLDELVVRLVKRQRTIGASK 602
A+ ++ M+ G DPD IT + + L R+ M +DE LV
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGM---------VDEAFELLVD--------- 498
Query: 603 IIEVMLDRC-LLPEASTWAIVVQQLCKPRNIRKAIS 637
+ C P T+ IV+ CK I AI+
Sbjct: 499 -----MRSCEFHPSVVTYNIVLLGFCKAHRIEDAIN 529
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 158/330 (47%), Gaps = 17/330 (5%)
Query: 313 DVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWK 372
D + H + G + +L ++ +G+ + + + LI G F A+++
Sbjct: 89 DTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM- 147
Query: 373 EMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAG 432
E++EK +P+ Y+ALI+G C+ + D+A L M++K P++ TY+ ++ G
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 433 DCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYS 492
A+ V ++ +++C + Y+ILI G + EA+ + +MLSRG+K D+ Y+
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 493 SMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIML 552
++I G C +VD+ ++ + + E PDV +YNILL A Q ++ M
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCE--PDVISYNILLRALLNQGKWEEGEKLMTKMF 325
Query: 553 DQGCDPDFITCDIFLKTL-RDN-----MNPPQDGRE--------FLDELVVRLVKRQRTI 598
+ CDP+ +T I + TL RD MN + +E D L+ + R
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 599 GASKIIEVMLDRCLLPEASTWAIVVQQLCK 628
A + +E M+ LP+ + V+ LCK
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCK 415
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 160/601 (26%), Positives = 280/601 (46%), Gaps = 93/601 (15%)
Query: 103 NFIVIFKAYGKAHFPEKAVNLFHRMEAEF-HCKQTVKSFNSVLNVIIQEGHFHRALEFYS 161
+ + + + K++ +KA F + + F K +V +N +L I+E R +EF S
Sbjct: 77 SLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKE----RRVEFVS 132
Query: 162 HVCKSL---NIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGL 218
+ K + I P TFNL+I+ALC VD A E+F + + C P+ +T+ L+ G
Sbjct: 133 WLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGY 192
Query: 219 CKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNE 278
CK G D+ + LL+ M+ G PN ++N ++S+ C++G + K+V+ M +G VP+
Sbjct: 193 CKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDI 252
Query: 279 VTYNTLVDGLCRKGKLNKAVSLLNQMVANKCV----PNDVTFGTLVHGFVKQGRASDGAS 334
VT+N+ + LC++GK+ A + + M ++ + PN +T+ ++ GF K G D +
Sbjct: 253 VTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKT 312
Query: 335 VLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLC 394
+ S+ E + Y+ + GL + GKF A + K+M +KG P+ Y+ L+DGLC
Sbjct: 313 LFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLC 372
Query: 395 REGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSC----- 449
+ G +A+ + MK G P++ TY L+ G+ G A + +EM N+C
Sbjct: 373 KLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAY 432
Query: 450 -----------------------NHNEVCY-------SILINGLCKNGKLMEAMMVWKQM 479
NE Y +I+++GLC +G+L +A+ + K M
Sbjct: 433 TCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492
Query: 480 LSRG-----------IKL------------DVVAYSSMIHGFCNAQLVDQGMKLFNQMLC 516
G I L D++ YS++++G C A + LF +M+
Sbjct: 493 RVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMG 552
Query: 517 QEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNP 576
++ LQPD YNI ++ F +Q IS A VL M +GC
Sbjct: 553 EK--LQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSL---------------- 594
Query: 577 PQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
E + L++ L + + +++ M ++ + P T+ +Q LC+ + A
Sbjct: 595 -----ETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDAT 649
Query: 637 S 637
+
Sbjct: 650 N 650
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/541 (26%), Positives = 252/541 (46%), Gaps = 62/541 (11%)
Query: 68 SFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRM 127
+F LI L SS + EL +M + E F ++ + Y KA +K + L + M
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM 208
Query: 128 EA--------------EFHCKQ--------------------TVKSFNSVLNVIIQEGHF 153
E+ C++ + +FNS ++ + +EG
Sbjct: 209 ESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKV 268
Query: 154 HRALEFYS--HVCKSLNI-QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYT 210
A +S + + L + +PN +T+NL++K CKVGL++ A +F I + +
Sbjct: 269 LDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQS 328
Query: 211 YSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMS 270
Y+ + GL + G+ EA ++L +M +G P+ + +N+L+ LCK G L A +V M
Sbjct: 329 YNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMK 388
Query: 271 LKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRAS 330
G P+ VTY L+ G C GK++ A SLL +M+ N C+PN T L+H K GR S
Sbjct: 389 RNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRIS 448
Query: 331 DGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEM---------------- 374
+ +L + E+G+ + + ++ GL G+ + A+++ K M
Sbjct: 449 EAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYI 508
Query: 375 -------MEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRG 427
+E C P+ + YS L++GLC+ G+ EA+ EM + P+S Y+ +
Sbjct: 509 GLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHH 568
Query: 428 FFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLD 487
F + G A V K+M+ C+ + Y+ LI GL ++ E + +M +GI +
Sbjct: 569 FCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPN 628
Query: 488 VVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDV 547
+ Y++ I C + V+ L ++M+ + + P+V ++ L+ AF + + A +V
Sbjct: 629 ICTYNTAIQYLCEGEKVEDATNLLDEMM--QKNIAPNVFSFKYLIEAFCKVPDFDMAQEV 686
Query: 548 L 548
Sbjct: 687 F 687
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 244/507 (48%), Gaps = 29/507 (5%)
Query: 147 IIQEGHFHRALEFYSHVCKSLNIQPNGLTFNL-VIKALCKVGLVDQAVEVFRGIHLR--N 203
I+ H ++ ++ S +IQ L+ L V+ K +D+A F+ + R
Sbjct: 48 ILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPE 107
Query: 204 CAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAA 263
P Y Y+ L++ KE R++ L +M + G P + FN+LI ALC + A
Sbjct: 108 NKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAR 167
Query: 264 KLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGF 323
+L D M KGC PNE T+ LV G C+ G +K + LLN M + +PN V + T+V F
Sbjct: 168 ELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSF 227
Query: 324 VKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG----C 379
++GR D ++ + E G + ++S IS L KEGK A +++ +M
Sbjct: 228 CREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLP 287
Query: 380 EPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAIL 439
PN++ Y+ ++ G C+ G ++A+ ++ L + +Y+ ++G G +A
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347
Query: 440 VWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFC 499
V K+M + + Y+IL++GLCK G L +A + M G+ D V Y ++HG+C
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 500 NAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
+ VD L +M+ P+ T NILL++ ++ IS A ++L M ++G D
Sbjct: 408 SVGKVDAAKSLLQEMM--RNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLD 465
Query: 560 FITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASK-----------IIEVML 608
+TC+I + L G LD+ + +VK R G++ + + ++
Sbjct: 466 TVTCNIIVDGLC--------GSGELDK-AIEIVKGMRVHGSAALGNLGNSYIGLVDDSLI 516
Query: 609 DRCLLPEASTWAIVVQQLCKPRNIRKA 635
+ LP+ T++ ++ LCK +A
Sbjct: 517 ENNCLPDLITYSTLLNGLCKAGRFAEA 543
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 204/428 (47%), Gaps = 33/428 (7%)
Query: 127 MEAEFHCKQ--------TVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNL 178
+EAE KQ ++ S+N +++ + + G A + K + P+ +T+
Sbjct: 343 IEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG-LMKRNGVCPDAVTYGC 401
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG 238
++ C VG VD A + + + NC P++YT + L+ L K GRI EA LL +M +G
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKG-----------------------CV 275
+ N+++ LC G+L +A ++V M + G C+
Sbjct: 462 YGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCL 521
Query: 276 PNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASV 335
P+ +TY+TL++GLC+ G+ +A +L +M+ K P+ V + +H F KQG+ S V
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 336 LISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCR 395
L +E++G + Y+SLI GL + + L EM EKG PN Y+ I LC
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 396 EGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVC 455
K ++A L EM K PN F++ L+ F + D A V+ E + C E
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQKEGL 700
Query: 456 YSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
YS++ N L G+L++A + + +L RG +L Y ++ C ++ + ++M+
Sbjct: 701 YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMI 760
Query: 516 CQEAELQP 523
+ P
Sbjct: 761 DRGYGFDP 768
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 164/393 (41%), Gaps = 66/393 (16%)
Query: 132 HCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGL---TFNLVIKALCKVGL 188
+C + N +L+ + + G A E + + +N + GL T N+++ LC G
Sbjct: 426 NCLPNAYTCNILLHSLWKMGRISEAEE----LLRKMNEKGYGLDTVTCNIIVDGLCGSGE 481
Query: 189 VDQAVEVFRGIHLR-----------------------NCAPDSYTYSTLMDGLCKEGRID 225
+D+A+E+ +G+ + NC PD TYSTL++GLCK GR
Sbjct: 482 LDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFA 541
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
EA +L EM E P+ +N+ I CK+G + A +++ +M KGC + TYN+L+
Sbjct: 542 EAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI 601
Query: 286 DGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR 345
GL K ++ + L+++M PN T+ T + ++ +G
Sbjct: 602 LGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQ-YLCEGE----------------- 643
Query: 346 GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREY 405
K E A L EMM+K PN + LI+ C+ D A+E
Sbjct: 644 -----------------KVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQE- 685
Query: 406 LIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCK 465
+ E YS + AG KA + + + + Y L+ LCK
Sbjct: 686 VFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCK 745
Query: 466 NGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGF 498
+L A + +M+ RG D A +I G
Sbjct: 746 KDELEVASGILHKMIDRGYGFDPAALMPVIDGL 778
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 168 NIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEA 227
NI PN +F +I+A CKV D A EVF + C YS + + L G++ +A
Sbjct: 659 NIAPNVFSFKYLIEAFCKVPDFDMAQEVFE-TAVSICGQKEGLYSLMFNELLAAGQLLKA 717
Query: 228 VSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDG 287
LL+ + G F++ L+ +LCKK +L A+ ++ M +G + ++DG
Sbjct: 718 TELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDG 777
Query: 288 LCRKGKLNKAVSLLNQM--------VANKCVPN 312
L + G +A S ++M VANK PN
Sbjct: 778 LGKMGNKKEANSFADKMMEMASVGEVANKVDPN 810
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/465 (30%), Positives = 241/465 (51%), Gaps = 6/465 (1%)
Query: 171 PNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSL 230
P T+ ++IK+LC +A+ + + + P+ +TY+ L+D LC + + ++A L
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 231 LDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCR 290
L +M +G PN +N LI+ CK+G + A +V+ M + PN TYN L+ G C
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC- 439
Query: 291 KGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYI 350
K ++KA+ +LN+M+ K +P+ VT+ +L+ G + G +L + +RG +++
Sbjct: 440 KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
Y+S+I L K + E A L+ + +KG PN V+Y+ALIDG C+ GK DEA L +M
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
+K LPNS T+++L+ G G +A L+ ++M +ILI+ L K+G
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 471 EAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNI 530
A ++QMLS G K D Y++ I +C + + +M +E + PD+ TY+
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM--RENGVSPDLFTYSS 677
Query: 531 LLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVR 590
L+ + + A DVL M D GC+P T +K L + Q G E EL
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSE--PELCA- 734
Query: 591 LVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKA 635
+ +++E M++ + P A ++ ++ +C+ N+R A
Sbjct: 735 MSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA 779
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 149/557 (26%), Positives = 272/557 (48%), Gaps = 55/557 (9%)
Query: 117 PEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGL-- 174
P+ A+N H + K +V S+ S+L ++I G+ + + KS + + L
Sbjct: 103 PKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYV 162
Query: 175 ----------------------TFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYS 212
+N ++ +L + GLVD+ +V+ + P+ YTY+
Sbjct: 163 LDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYN 222
Query: 213 TLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLK 272
+++G CK G ++EA + ++ G P+ F + LI C++ DL A K+ + M LK
Sbjct: 223 KMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLK 282
Query: 273 GCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDG 332
GC NEV Y L+ GLC ++++A+ L +M ++C P T+ L+ R S+
Sbjct: 283 GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEA 342
Query: 333 ASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDG 392
+++ +EE G + N + Y+ LI L + KFE A +L +M+EKG PN + Y+ALI+G
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402
Query: 393 LCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHN 452
C+ G ++A + + M+++ PN+ TY+ L++G+ ++ + HKA+ V +M +
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPD 461
Query: 453 EVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFN 512
V Y+ LI+G C++G A + M RG+ D Y+SMI C ++ V++ LF+
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 513 QMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRD 572
+ ++ + P+V Y L++ + + + A +L ML + C P+ +T + + L
Sbjct: 522 SL--EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL-- 577
Query: 573 NMNPPQDGR----EFLDELVVRLVKRQRTIGASKII-----------------EVMLDRC 611
DG+ L+E +V+ + Q T+ I+ + ML
Sbjct: 578 ----CADGKLKEATLLEEKMVK-IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 612 LLPEASTWAIVVQQLCK 628
P+A T+ +Q C+
Sbjct: 633 TKPDAHTYTTFIQTYCR 649
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 252/503 (50%), Gaps = 10/503 (1%)
Query: 72 LIEKLAASSDFASLEELLQQMKRERRVFIEKNFIV-----IFKAYGKAHFPEKAVNLFHR 126
+I+ + D + +L ++M ++ R ++ I+ + + + ++ ++
Sbjct: 149 MIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYME 208
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
M + C + ++N ++N + G+ A ++ S + ++ + P+ T+ +I C+
Sbjct: 209 MLEDKVCPN-IYTYNKMVNGYCKLGNVEEANQYVSKIVEA-GLDPDFFTYTSLIMGYCQR 266
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
+D A +VF + L+ C + Y+ L+ GLC RIDEA+ L +M+ + FP +
Sbjct: 267 KDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTY 326
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA 306
VLI +LC A LV M G PN TY L+D LC + K KA LL QM+
Sbjct: 327 TVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE 386
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEH 366
+PN +T+ L++G+ K+G D V+ +E R N Y+ LI G K
Sbjct: 387 KGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHK 445
Query: 367 AMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMR 426
AM + +M+E+ P+ V Y++LIDG CR G D A L M ++G +P+ +TY+S++
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMID 505
Query: 427 GFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKL 486
++ +A ++ ++ N N V Y+ LI+G CK GK+ EA ++ ++MLS+
Sbjct: 506 SLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLP 565
Query: 487 DVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMD 546
+ + ++++IHG C + + L +M+ + LQP V+T IL++ + + A
Sbjct: 566 NSLTFNALIHGLCADGKLKEATLLEEKMV--KIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 547 VLNIMLDQGCDPDFITCDIFLKT 569
ML G PD T F++T
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQT 646
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 137/554 (24%), Positives = 254/554 (45%), Gaps = 55/554 (9%)
Query: 66 DLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFH 125
++++ LI L + +L +MK + + + V+ K+ + +A+NL
Sbjct: 288 EVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVK 347
Query: 126 RMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCK 185
ME E K + ++ +++ + + F +A E + + + PN +T+N +I CK
Sbjct: 348 EME-ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK-GLMPNVITYNALINGYCK 405
Query: 186 VGLVDQAVEVFRGIHLRNCA----------------------------------PDSYTY 211
G+++ AV+V + R + PD TY
Sbjct: 406 RGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTY 465
Query: 212 STLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSL 271
++L+DG C+ G D A LL M G P+ + + +I +LCK + A L D++
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 272 KGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASD 331
KG PN V Y L+DG C+ GK+++A +L +M++ C+PN +TF L+HG G+ +
Sbjct: 526 KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Query: 332 GASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALID 391
+ + + G + + LI L K+G F+HA +++M+ G +P+ Y+ I
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 392 GLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNH 451
CREG+ +A + + +M+ G P+ FTYSSL++G+ + G + A V K M++ C
Sbjct: 646 TYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEP 705
Query: 452 NEVCYSILING---------------LCKNGKLME---AMMVWKQMLSRGIKLDVVAYSS 493
++ + LI LC +ME + + ++M+ + + +Y
Sbjct: 706 SQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEK 765
Query: 494 MIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLD 553
+I G C + K+F+ M E + P +N LL+ + + A V++ M+
Sbjct: 766 LILGICEVGNLRVAEKVFDHMQRNEG-ISPSELVFNALLSCCCKLKKHNEAAKVVDDMIC 824
Query: 554 QGCDPDFITCDIFL 567
G P +C + +
Sbjct: 825 VGHLPQLESCKVLI 838
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 129/519 (24%), Positives = 237/519 (45%), Gaps = 24/519 (4%)
Query: 68 SFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRM 127
++ LI+ L + F ELL QM + + + + Y K E AV++ M
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 128 EAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVG 187
E+ T +++N ++ + + H+A+ + + + + P+ +T+N +I C+ G
Sbjct: 420 ESRKLSPNT-RTYNELIKGYCK-SNVHKAMGVLNKMLER-KVLPDVVTYNSLIDGQCRSG 476
Query: 188 LVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFN 247
D A + ++ R PD +TY++++D LCK R++EA L D ++ +G PN ++
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 248 VLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVAN 307
LI CK G + A +++ M K C+PN +T+N L+ GLC GKL +A L +MV
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 308 KCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHA 367
P T L+H +K G S + G + + + Y++ I +EG+ A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 368 MQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRG 427
+ +M E G P+ YS+LI G G+ + A + L M++ G P+ T+ SL++
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH 716
Query: 428 FFEAG------------------DCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKL 469
E + + + ++M +S N Y LI G+C+ G L
Sbjct: 717 LLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNL 776
Query: 470 MEAMMVWKQM-LSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATY 528
A V+ M + GI + +++++ C + ++ K+ + M+C P + +
Sbjct: 777 RVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMIC--VGHLPQLESC 834
Query: 529 NILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
+L+ Y++ R V +L G D + I +
Sbjct: 835 KVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIII 873
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 127/286 (44%), Gaps = 58/286 (20%)
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
Y++L++ L + G + Q++ EM+E PN Y+ +++G C+ G +EA +Y+ ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
G P+ FTY+SL+ G+ C+ L
Sbjct: 246 EAGLDPDFFTYTSLIMGY-----------------------------------CQRKDLD 270
Query: 471 EAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNI 530
A V+ +M +G + + VAY+ +IHG C A+ +D+ M LF +M ++ E P V TY +
Sbjct: 271 SAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM--KDDECFPTVRTYTV 328
Query: 531 LLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVR 590
L+ + S A++++ M + G P+ T + + +L + RE L +
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKF-EKARELLGQ---- 383
Query: 591 LVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
ML++ L+P T+ ++ CK I A+
Sbjct: 384 ----------------MLEKGLMPNVITYNALINGYCKRGMIEDAV 413
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 159/346 (45%), Gaps = 23/346 (6%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQM-KRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFH 125
L+F +LI L A L ++M K + + + I+I + F + A + F
Sbjct: 568 LTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF-DHAYSRFQ 626
Query: 126 RMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCK 185
+M + K ++ + + +EG A + + + + + P+ T++ +IK
Sbjct: 627 QMLSS-GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM-RENGVSPDLFTYSSLIKGYGD 684
Query: 186 VGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLC--KEGR----------------IDEA 227
+G + A +V + + C P +T+ +L+ L K G+ D
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTV 744
Query: 228 VSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSL-KGCVPNEVTYNTLVD 286
V LL++M PN + LI +C+ G+L A K+ D+M +G P+E+ +N L+
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804
Query: 287 GLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRG 346
C+ K N+A +++ M+ +P + L+ G K+G G SV +L + G+
Sbjct: 805 CCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYE 864
Query: 347 NEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDG 392
+E + +I G+ K+G E +L+ M + GC+ ++ YS LI+G
Sbjct: 865 DELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 150/518 (28%), Positives = 255/518 (49%), Gaps = 39/518 (7%)
Query: 87 ELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNV 146
+L + M R + +F +F A K + + L +ME + + + + ++N
Sbjct: 74 DLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELK-GIAHNLYTLSIMINC 132
Query: 147 IIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAP 206
+ A + K L +PN +TF+ +I LC G V +A+E+ + P
Sbjct: 133 FCRCRKLCLAFSAMGKIIK-LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 207 DSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV 266
D T +TL++GLC G+ EA+ L+D+M G PN + +++ +CK G A +L+
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 267 DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQ 326
M + + V Y+ ++DGLC+ G L+ A +L N+M N +T+ L+ GF
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 327 GRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVY 386
GR DGA +L + +R N +S LI KEGK A +L KEM+ +G P+T+ Y
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371
Query: 387 SALIDGLCREGKADEAREYLIEMKNKGHLPN----------------------------- 417
++LIDG C+E D+A + + M +KG PN
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 431
Query: 418 ------SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLME 471
+ TY++L++GF E G + A +++EM + N V Y IL++GLC NG+ +
Sbjct: 432 RGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 491
Query: 472 AMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNIL 531
A+ +++++ ++LD+ Y+ +IHG CNA VD LF + + ++P V TYNI+
Sbjct: 492 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK--GVKPGVKTYNIM 549
Query: 532 LNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKT 569
+ ++ +S A + M + G PD T +I ++
Sbjct: 550 IGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587
Score = 215 bits (547), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 133/469 (28%), Positives = 241/469 (51%), Gaps = 8/469 (1%)
Query: 119 KAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNL 178
+A+ L RM E K + + N+++N + G A+ + + QPN +T+
Sbjct: 176 EALELVDRM-VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE-YGCQPNAVTYGP 233
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG 238
V+ +CK G A+E+ R + RN D+ YS ++DGLCK G +D A +L +EM+++G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAV 298
N +N+LI C G AKL+ +M + PN VT++ L+D ++GKL +A
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 299 SLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGL 358
L +M+ P+ +T+ +L+ GF K+ ++ + +G N ++ LI+G
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Query: 359 FKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNS 418
K + + ++L+++M +G +TV Y+ LI G C GK + A+E EM ++ PN
Sbjct: 414 CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 473
Query: 419 FTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQ 478
TY L+ G + G+ KA+ ++++++ + + Y+I+I+G+C K+ +A ++
Sbjct: 474 VTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 533
Query: 479 MLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQ 538
+ +G+K V Y+ MI G C + + LF +M +E PD TYNIL+ A
Sbjct: 534 LPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM--EEDGHAPDGWTYNILIRAHLGD 591
Query: 539 NNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDEL 587
+ ++++ ++ + G D T + + L D + + FLD L
Sbjct: 592 GDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDG----RLKKSFLDML 636
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 214/403 (53%), Gaps = 2/403 (0%)
Query: 171 PNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSL 230
P + F+ + A+ K D + + + + L+ A + YT S +++ C+ ++ A S
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 231 LDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCR 290
+ ++ G PN F+ LI+ LC +G + A +LVD M G P+ +T NTLV+GLC
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 291 KGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYI 350
GK +A+ L+++MV C PN VT+G +++ K G+ + +L +EER + +
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
YS +I GL K G ++A L+ EM KG N + Y+ LI G C G+ D+ + L +M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
+ PN T+S L+ F + G +A + KEM + + + Y+ LI+G CK L
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 471 EAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNI 530
+A + M+S+G ++ ++ +I+G+C A +D G++LF +M + + D TYN
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR--GVVADTVTYNT 443
Query: 531 LLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDN 573
L+ F + ++ A ++ M+ + P+ +T I L L DN
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Score = 202 bits (513), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 242/482 (50%), Gaps = 39/482 (8%)
Query: 171 PNGLTF------------NLVIKALCKVGLVD----QAVEVFRGIHLRNCAPDSYTYSTL 214
PN L+F NL + + GLVD A+++FR + P +S L
Sbjct: 35 PNELSFCCERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRL 94
Query: 215 MDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGC 274
+ K + D ++L +M+++G N + +++I+ C+ L A + + G
Sbjct: 95 FSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGY 154
Query: 275 VPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGAS 334
PN +T++TL++GLC +G++++A+ L+++MV P+ +T TLV+G G+ ++
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 335 VLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLC 394
++ + E G + N Y +++ + K G+ AM+L ++M E+ + + V YS +IDGLC
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 395 REGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEV 454
+ G D A EM+ KG N TY+ L+ GF AG + ++M N N V
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 455 CYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
+S+LI+ K GKL EA + K+M+ RGI D + Y+S+I GFC +D+ ++ + M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 515 LCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNM 574
+ + + P++ T+NIL+N + + N I +++ M +G D +T + ++ +
Sbjct: 395 VSKGCD--PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE-- 450
Query: 575 NPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRK 634
L +L V A ++ + M+ R + P T+ I++ LC K
Sbjct: 451 ---------LGKLNV----------AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 491
Query: 635 AI 636
A+
Sbjct: 492 AL 493
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 198/380 (52%), Gaps = 4/380 (1%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEK-NFIVIFKAYGKAHFPEKAVNLFH 125
+++ ++ + S A ELL++M+ ER + ++ + +I K + A NLF+
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKME-ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFN 287
Query: 126 RMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCK 185
ME + + ++N ++ G + + + K I PN +TF+++I + K
Sbjct: 288 EMEMK-GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVK 345
Query: 186 VGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFV 245
G + +A E+ + + R APD+ TY++L+DG CKE +D+A ++D M +G PN
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Query: 246 FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
FN+LI+ CK + +L MSL+G V + VTYNTL+ G C GKLN A L +MV
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE 365
+ K PN VT+ L+ G G + + +E+ + IY+ +I G+ K +
Sbjct: 466 SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 525
Query: 366 HAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
A L+ + KG +P Y+ +I GLC++G EA +M+ GH P+ +TY+ L+
Sbjct: 526 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585
Query: 426 RGFFEAGDCHKAILVWKEMK 445
R GD K++ + +E+K
Sbjct: 586 RAHLGDGDATKSVKLIEELK 605
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 229 bits (583), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 133/460 (28%), Positives = 243/460 (52%), Gaps = 7/460 (1%)
Query: 99 FIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALE 158
FI + + F + E+ ++LF +M + ++ F+ VL+ I + ++ +
Sbjct: 32 FISRFWGRTFSTKRSSMNLEEEIDLFCKM-IQSRPLPSIVDFSKVLSKIAKSKNYDLVIS 90
Query: 159 FYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGL 218
+ H+ + I + ++N+VI LC+ A+ V + PD T S+L++G
Sbjct: 91 LFHHM-EVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGF 149
Query: 219 CKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNE 278
C+ R+ +A+ L+ +M+ G P+ ++N +I CK G + A +L D M G +
Sbjct: 150 CQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADA 209
Query: 279 VTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLIS 338
VTYN+LV GLC G+ + A L+ MV VPN +TF ++ FVK+G+ S+ +
Sbjct: 210 VTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 269
Query: 339 LEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGK 398
+ R + + Y+SLI+GL G+ + A Q+ M+ KGC P+ V Y+ LI+G C+ +
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329
Query: 399 ADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSI 458
DE + EM +G + ++ TY+++++G+F+AG A ++ M + N YSI
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP---NIRTYSI 386
Query: 459 LINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQE 518
L+ GLC N ++ +A+++++ M I+LD+ Y+ +IHG C V+ LF + C+
Sbjct: 387 LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK- 445
Query: 519 AELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDP 558
L+PDV +Y +++ F ++ ++ + M + G P
Sbjct: 446 -GLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 211/392 (53%), Gaps = 5/392 (1%)
Query: 171 PNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSL 230
P+ + F+ V+ + K D + +F + + D Y+Y+ +++ LC+ R A+S+
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 231 LDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCR 290
+ +M G P+ + LI+ C+ + A LV M G P+ V YNT++DG C+
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 291 KGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYI 350
G +N AV L ++M + + VT+ +LV G GR SD A ++ + R N
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
++++I KEGKF AM+L++EM + +P+ Y++LI+GLC G+ DEA++ L M
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
KG LP+ TY++L+ GF ++ + +++EM + + Y+ +I G + G+
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 471 EAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNI 530
A ++ +M SR ++ YS +++G C V++ + LF M Q++E++ D+ TYNI
Sbjct: 367 AAQEIFSRMDSRP---NIRTYSILLYGLCMNWRVEKALVLFENM--QKSEIELDITTYNI 421
Query: 531 LLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
+++ + N+ A D+ + +G PD ++
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS 453
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 183/424 (43%), Gaps = 50/424 (11%)
Query: 224 IDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNT 283
++E + L +M P+ F+ ++S + K + L +M + G + +YN
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 284 LVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERG 343
+++ LCR + A+S++ +M+ P+ VT
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTV--------------------------- 142
Query: 344 HRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAR 403
SSLI+G + + A+ L +M E G P+ V+Y+ +IDG C+ G ++A
Sbjct: 143 --------SSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194
Query: 404 EYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGL 463
E M+ G ++ TY+SL+ G +G A + ++M N + ++ +I+
Sbjct: 195 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVF 254
Query: 464 CKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQP 523
K GK EAM ++++M R + DV Y+S+I+G C VD+ ++ + M+ + P
Sbjct: 255 VKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC--LP 312
Query: 524 DVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREF 583
DV TYN L+N F + + + M +G D IT + ++ P +E
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF-QAGRPDAAQEI 371
Query: 584 LDELVVRLVKRQRTI------------GASKIIEVMLDRCLLPEASTWAIVVQQLCKPRN 631
+ R R +I A + E M + + +T+ IV+ +CK N
Sbjct: 372 FSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGN 431
Query: 632 IRKA 635
+ A
Sbjct: 432 VEDA 435
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 249/501 (49%), Gaps = 26/501 (5%)
Query: 137 VKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVF 196
V + N ++N + ++G + F S V + + P+ +T+N +I A GL+++A E+
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQV-QEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 197 RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
+ + +P YTY+T+++GLCK G+ + A + EM G P+ + L+ CKK
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 257 GDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTF 316
GD++ K+ +M + VP+ V +++++ R G L+KA+ N + +P++V +
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 317 GTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMME 376
L+ G+ ++G S ++ + ++G + Y++++ GL K A +L+ EM E
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473
Query: 377 KGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHK 436
+ P++ + LIDG C+ G A E +MK K + TY++L+ GF + GD
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDT 533
Query: 437 AILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIH 496
A +W +M + + YSIL+N LC G L EA VW +M+S+ IK V+ +SMI
Sbjct: 534 AKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIK 593
Query: 497 GFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQ-- 554
G+C + G +M+ + PD +YN L+ F ++ N+S+A ++ M ++
Sbjct: 594 GYCRSGNASDGESFLEKMISE--GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG 651
Query: 555 GCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLP 614
G PD T + L ++ + A ++ M++R + P
Sbjct: 652 GLVPDVFTYNSILHG---------------------FCRQNQMKEAEVVLRKMIERGVNP 690
Query: 615 EASTWAIVVQQLCKPRNIRKA 635
+ ST+ ++ N+ +A
Sbjct: 691 DRSTYTCMINGFVSQDNLTEA 711
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 229/456 (50%), Gaps = 6/456 (1%)
Query: 106 VIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCK 165
+ AY E+A L + M + V ++N+V+N + + G + RA E ++ + +
Sbjct: 275 TLISAYSSKGLMEEAFELMNAMPGK-GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
S + P+ T+ ++ CK G V + +VF + R+ PD +S++M + G +D
Sbjct: 334 S-GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
+A+ + ++ G P+ ++ +LI C+KG + A L + M +GC + VTYNT++
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 286 DGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR 345
GLC++ L +A L N+M P+ T L+ G K G + + ++E+ R
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 346 GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREY 405
+ Y++L+ G K G + A ++W +M+ K P + YS L++ LC +G EA
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572
Query: 406 LIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCK 465
EM +K P +S+++G+ +G+ ++M + + + Y+ LI G +
Sbjct: 573 WDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632
Query: 466 NGKLMEAMMVWKQMLSR--GIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQP 523
+ +A + K+M G+ DV Y+S++HGFC + + + +M+ E + P
Sbjct: 633 EENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI--ERGVNP 690
Query: 524 DVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
D +TY ++N F Q+N++ A + + ML +G PD
Sbjct: 691 DRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/498 (25%), Positives = 228/498 (45%), Gaps = 76/498 (15%)
Query: 198 GIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEM-------------QIEGTF---- 240
G H N S + S ++ L + GR+ +A S L M ++ TF
Sbjct: 103 GFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCG 162
Query: 241 PNPFVFNVLISALCKK-----------------------------GDLIR------AAKL 265
N VF++LI + G L+R A +
Sbjct: 163 SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGV 222
Query: 266 VDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVK 325
+S G N T N +V+ LC+ GK+ K + L+Q+ P+ VT+ TL+ +
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 326 QGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVV 385
+G + ++ ++ +G Y Y+++I+GL K GK+E A +++ EM+ G P++
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 386 YSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMK 445
Y +L+ C++G E + +M+++ +P+ +SS+M F +G+ KA++ + +K
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 446 NNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVD 505
+ V Y+ILI G C+ G + AM + +ML +G +DVV Y++++HG C +++
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 506 QGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDI 565
+ KLFN+M E L PD T IL++ + N+ AM++ M ++ D +T +
Sbjct: 463 EADKLFNEM--TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN- 519
Query: 566 FLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQ 625
TL D D +D A +I M+ + +LP +++I+V
Sbjct: 520 ---TLLDGFGKVGD----IDT-------------AKEIWADMVSKEILPTPISYSILVNA 559
Query: 626 LCKPRNIRKAISECWSRL 643
LC ++ +A W +
Sbjct: 560 LCSKGHLAEAF-RVWDEM 576
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 185/437 (42%), Gaps = 81/437 (18%)
Query: 256 KGDLIRAAKLVDNMSLKGCVPN----EVTYNTLVDGLCRKGKLNKAVSLLNQMVA----- 306
+ DL + VD + PN ++ + ++ L R G+L+ A S L +M+
Sbjct: 89 RNDLTLGQRFVDQLGFH--FPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVS 146
Query: 307 ------------NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSL 354
+ C ND F L+ +V+ + + L +G + ++L
Sbjct: 147 RLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNAL 206
Query: 355 ISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGH 414
I L + G E A +++E+ G N + +++ LC++GK ++ +L +++ KG
Sbjct: 207 IGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGV 266
Query: 415 LPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMM 474
P+ TY++L+ + G +A + M + Y+ +INGLCK+GK A
Sbjct: 267 YPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKE 326
Query: 475 VWKQML-----------------------------------SRGIKLDVVAYSSMIHGFC 499
V+ +ML SR + D+V +SSM+ F
Sbjct: 327 VFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFT 386
Query: 500 NAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
+ +D+ + FN + +EA L PD Y IL+ + ++ IS AM++ N ML QGC D
Sbjct: 387 RSGNLDKALMYFNSV--KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444
Query: 560 FITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTW 619
+T + L L KR+ A K+ M +R L P++ T
Sbjct: 445 VVTYNTILHG---------------------LCKRKMLGEADKLFNEMTERALFPDSYTL 483
Query: 620 AIVVQQLCKPRNIRKAI 636
I++ CK N++ A+
Sbjct: 484 TILIDGHCKLGNLQNAM 500
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 106/229 (46%), Gaps = 4/229 (1%)
Query: 87 ELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNV 146
EL Q+MK +R + + +GK + A ++ M ++ T S++ ++N
Sbjct: 501 ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK-EILPTPISYSILVNA 559
Query: 147 IIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAP 206
+ +GH A + + S NI+P + N +IK C+ G + P
Sbjct: 560 LCSKGHLAEAFRVWDEMI-SKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP 618
Query: 207 DSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE--GTFPNPFVFNVLISALCKKGDLIRAAK 264
D +Y+TL+ G +E + +A L+ +M+ E G P+ F +N ++ C++ + A
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678
Query: 265 LVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPND 313
++ M +G P+ TY +++G + L +A + ++M+ P+D
Sbjct: 679 VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 221/416 (53%), Gaps = 4/416 (0%)
Query: 120 AVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLV 179
A++LF M + ++ FN +L+ I++ + + + + L I+ + TFN+V
Sbjct: 69 AIDLFSDM-VKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM-EVLGIRNDLYTFNIV 126
Query: 180 IKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGT 239
I C V A+ + + PD T +L++G C+ R+ +AVSL+D+M G
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 240 FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVS 299
P+ +N +I +LCK + A + KG PN VTY LV+GLC + + A
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 300 LLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
LL+ M+ K PN +T+ L+ FVK G+ + + + + YSSLI+GL
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 360 KEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSF 419
+ + A Q++ M+ KGC + V Y+ LI+G C+ + ++ + EM +G + N+
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 420 TYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM 479
TY++L++GFF+AGD KA + +M + + Y+IL+ GLC NG+L +A+++++ M
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 480 LSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAF 535
R + LD+V Y+++I G C V++ LF + + L+PD+ TY +++
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK--GLKPDIVTYTTMMSGL 480
Score = 206 bits (525), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 222/425 (52%), Gaps = 27/425 (6%)
Query: 220 KEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEV 279
++ ++++A+ L +M FP+ FN L+SA+ K L M + G +
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 280 TYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISL 339
T+N +++ C +++ A+S+L +M+ P+ VT G+LV+GF ++ R SD S++ +
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 340 EERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKA 399
E G++ + Y+++I L K + A +KE+ KG PN V Y+AL++GLC +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 400 DEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSIL 459
+A L +M K PN TYS+L+ F + G +A +++EM S + + V YS L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 460 INGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEA 519
INGLC + ++ EA ++ M+S+G DVV+Y+++I+GFC A+ V+ GMKLF +M +
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM--SQR 359
Query: 520 ELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQD 579
L + TYN L+ F+Q ++ +A + + M G PD T +I L L DN
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN------ 413
Query: 580 GREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAISEC 639
EL LV I E M R + + T+ V++ +CK + +A
Sbjct: 414 -----GELEKALV----------IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA---- 454
Query: 640 WSRLC 644
WS C
Sbjct: 455 WSLFC 459
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 209/415 (50%), Gaps = 3/415 (0%)
Query: 148 IQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPD 207
+++ + A++ +S + KS P+ + FN ++ A+ K+ D + + + + + D
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119
Query: 208 SYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVD 267
YT++ +++ C ++ A+S+L +M G P+ L++ C++ + A LVD
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 268 NMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQG 327
M G P+ V YN ++D LC+ ++N A ++ PN VT+ LV+G
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 328 RASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYS 387
R SD A +L + ++ N YS+L+ K GK A +L++EM+ +P+ V YS
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 388 ALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNN 447
+LI+GLC + DEA + M +KG L + +Y++L+ GF +A + +++EM
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 448 SCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQG 507
N V Y+ LI G + G + +A + QM GI D+ Y+ ++ G C+ +++
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Query: 508 MKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
+ +F M Q+ E+ D+ TY ++ + + A + + +G PD +T
Sbjct: 420 LVIFEDM--QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 146/518 (28%), Positives = 256/518 (49%), Gaps = 39/518 (7%)
Query: 87 ELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNV 146
+L Q+M R R +F +F + + ++L +ME + + + + ++N
Sbjct: 58 DLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELK-GIAHNLYTLSIMINC 116
Query: 147 IIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAP 206
+ A + K L +P+ +TF+ +I LC G V +A+E+ + P
Sbjct: 117 CCRCRKLSLAFSAMGKIIK-LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 207 DSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV 266
T + L++GLC G++ +AV L+D M G PN + ++ +CK G A +L+
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 267 DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQ 326
M + + V Y+ ++DGLC+ G L+ A +L N+M + + + TL+ GF
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 327 GRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVY 386
GR DGA +L + +R + +S+LI KEGK A +L KEM+++G P+TV Y
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 387 SALIDGLCREGKADEAREYLIEMKNKGHLPN----------------------------- 417
++LIDG C+E + D+A L M +KG PN
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 418 ------SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLME 471
+ TY++L++GF E G A +++EM + + V Y IL++GLC NG+ +
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 472 AMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNIL 531
A+ +++++ ++LD+ Y+ +IHG CNA VD LF + + ++PDV TYNI+
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK--GVKPDVKTYNIM 533
Query: 532 LNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKT 569
+ ++ ++S A + M + G P+ T +I ++
Sbjct: 534 IGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 245/469 (52%), Gaps = 8/469 (1%)
Query: 119 KAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNL 178
+A+ L RM E K T+ + N+++N + G A+ + ++ QPN +T+
Sbjct: 160 EALELVDRM-VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET-GFQPNEVTYGP 217
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG 238
V+K +CK G A+E+ R + R D+ YS ++DGLCK+G +D A +L +EM+I+G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAV 298
+ ++ LI C G AKL+ +M + P+ V ++ L+D ++GKL +A
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 299 SLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGL 358
L +M+ P+ VT+ +L+ GF K+ + +L + +G N ++ LI+G
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 359 FKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNS 418
K + ++L+++M +G +TV Y+ LI G C GK + A+E EM ++ P+
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457
Query: 419 FTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQ 478
+Y L+ G + G+ KA+ ++++++ + + Y+I+I+G+C K+ +A ++
Sbjct: 458 VSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 517
Query: 479 MLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQ 538
+ +G+K DV Y+ MI G C + + LF +M +E P+ TYNIL+ A +
Sbjct: 518 LPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM--EEDGHSPNGCTYNILIRAHLGE 575
Query: 539 NNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDEL 587
+ +++ ++ + G D T +K + D ++ + + FLD L
Sbjct: 576 GDATKSAKLIEEIKRCGFSVDAST----VKMVVDMLSDGRLKKSFLDML 620
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 224/447 (50%), Gaps = 23/447 (5%)
Query: 190 DQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVL 249
D AV++F+ + P +S L + + + D + L +M+++G N + +++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 250 ISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC 309
I+ C+ L A + + G P+ VT++TL++GLC +G++++A+ L+++MV
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 310 VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
P +T LV+G G+ SD ++ + E G + NE Y ++ + K G+ AM+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF 429
L ++M E+ + + V YS +IDGLC++G D A EM+ KG + Y++L+RGF
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 430 EAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVV 489
AG + ++M + V +S LI+ K GKL EA + K+M+ RGI D V
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 490 AYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLN 549
Y+S+I GFC +D+ + + M+ + P++ T+NIL+N + + N I +++
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGC--GPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 550 IMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLD 609
M +G D +T + ++ + + + +E E+V R V+
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCE-LGKLEVAKELFQEMVSRRVR---------------- 454
Query: 610 RCLLPEASTWAIVVQQLCKPRNIRKAI 636
P+ ++ I++ LC KA+
Sbjct: 455 ----PDIVSYKILLDGLCDNGEPEKAL 477
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 198/385 (51%), Gaps = 4/385 (1%)
Query: 62 YKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEK-NFIVIFKAYGKAHFPEKA 120
++ ++++ +++ + S A ELL++M+ ER++ ++ + +I K + A
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKME-ERKIKLDAVKYSIIIDGLCKDGSLDNA 266
Query: 121 VNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVI 180
NLF+ ME + K + + +++ G + + + K I P+ + F+ +I
Sbjct: 267 FNLFNEMEIKGF-KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALI 324
Query: 181 KALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTF 240
K G + +A E+ + + R +PD+ TY++L+DG CKE ++D+A +LD M +G
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 241 PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSL 300
PN FN+LI+ CK + +L MSL+G V + VTYNTL+ G C GKL A L
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 301 LNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFK 360
+MV+ + P+ V++ L+ G G + +E+ + IY+ +I G+
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504
Query: 361 EGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFT 420
K + A L+ + KG +P+ Y+ +I GLC++G EA +M+ GH PN T
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
Query: 421 YSSLMRGFFEAGDCHKAILVWKEMK 445
Y+ L+R GD K+ + +E+K
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIK 589
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 152/551 (27%), Positives = 267/551 (48%), Gaps = 65/551 (11%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+ A+ LF M + ++ F+ +L+ I + F + + ++L I N T++
Sbjct: 57 DDAIGLFGDM-VKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM-QNLGISHNLYTYS 114
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
+ I C+ + A+ + + P T ++L++G C RI EAV+L+D+M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G P+ F L+ L + A LV+ M +KGC P+ VTY +++GLC++G+ + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVK-------------------------------- 325
++LLN+M K + V + T++ G K
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 326 ---QGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMME-KGCEP 381
GR SD + +L + E+ + +++LI KEGK A +L+ EM++ K C P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 382 NTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVW 441
+ V Y+ LI G C+ + +E E EM +G + N+ TY++L+ GFF+A DC A +V+
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 442 KEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNA 501
K+M ++ + + + Y+IL++GLC NG + A++V++ M R +KLD+V Y++MI C A
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 502 QLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFI 561
V+ G LF + + ++P+V TY +++ F ++ A + M + G P+
Sbjct: 475 GKVEDGWDLFCSLSLK--GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSG 532
Query: 562 TCDIFLKT-LRDNMNPPQDGREFLDELV-VRLVKRQRTIGASKIIEVMLDRCLLPEASTW 619
T + ++ LRD DE L+K R+ G + +AST+
Sbjct: 533 TYNTLIRARLRDG-----------DEAASAELIKEMRSCGFAG------------DASTF 569
Query: 620 AIVVQQLCKPR 630
+V L R
Sbjct: 570 GLVTNMLHDGR 580
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/527 (27%), Positives = 253/527 (48%), Gaps = 58/527 (11%)
Query: 104 FIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHV 163
F + A K + + ++L +M+ + +++ +N + AL +
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQ-NLGISHNLYTYSIFINYFCRRSQLSLALAILGKM 136
Query: 164 CKSLNIQPNGLTFNLVIKALC-------KVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMD 216
K L P+ +T N ++ C V LVDQ VE+ PD+ T++TL+
Sbjct: 137 MK-LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM-------GYQPDTVTFTTLVH 188
Query: 217 GLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVP 276
GL + + EAV+L++ M ++G P+ + +I+ LCK+G+ A L++ M
Sbjct: 189 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 248
Query: 277 NEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVL 336
+ V YNT++DGLC+ ++ A L N+M P+ T+ L+ GR SD + +L
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 337 ISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMME-KGCEPNTVVYSALIDGLCR 395
+ E+ + +++LI KEGK A +L+ EM++ K C P+ V Y+ LI G C+
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 396 EGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVC 455
+ +E E EM +G + N+ TY++L+ GFF+A DC A +V+K+M ++ + + +
Sbjct: 369 YKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMT 428
Query: 456 YSILINGLCKNGKLMEAMMVWKQMLSRGIKLD---------------------------- 487
Y+IL++GLC NG + A++V++ M R +KLD
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS 488
Query: 488 -------VVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNN 540
VV Y++M+ GFC L ++ LF +M +E P+ TYN L+ A + +
Sbjct: 489 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM--KEDGPLPNSGTYNTLIRARLRDGD 546
Query: 541 ISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDEL 587
+ + +++ M G D T + L D + + FLD L
Sbjct: 547 EAASAELIKEMRSCGFAGDASTFGLVTNMLHDG----RLDKSFLDML 589
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 231/457 (50%), Gaps = 28/457 (6%)
Query: 189 VDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNV 248
+D A+ +F + P +S L+ + K + D +SL ++MQ G N + +++
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK 308
I+ C++ L A ++ M G P+ VT N+L++G C ++++AV+L++QMV
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 309 CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAM 368
P+ VTF TLVHG + +AS+ +++ + +G + + Y ++I+GL K G+ + A+
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 369 QLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGF 428
L +M + E + V+Y+ +IDGLC+ D+A + +M+ KG P+ FTY+ L+
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQML-SRGIKLD 487
G A + +M + N + V ++ LI+ K GKL+EA ++ +M+ S+ D
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 488 VVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDV 547
VVAY+++I GFC + V++GM++F +M + L + TY L++ F+Q + A V
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREM--SQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 548 LNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVM 607
M+ G PD +T +I L L +N N A + E M
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVET---------------------ALVVFEYM 452
Query: 608 LDRCLLPEASTWAIVVQQLCKPRNIRKAISECWSRLC 644
R + + T+ +++ LCK + W C
Sbjct: 453 QKRDMKLDIVTYTTMIEALCKAGKVEDG----WDLFC 485
Score = 202 bits (514), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 218/425 (51%), Gaps = 4/425 (0%)
Query: 147 IIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAP 206
++Q+ A+ + + KS P+ + F+ ++ A+ K+ D + + + +
Sbjct: 50 VLQDLKLDDAIGLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISH 108
Query: 207 DSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV 266
+ YTYS ++ C+ ++ A+++L +M G P+ N L++ C + A LV
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 267 DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQ 326
D M G P+ VT+ TLV GL + K ++AV+L+ +MV C P+ VT+G +++G K+
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
Query: 327 GRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVY 386
G ++L +E+ + IY+++I GL K + A L+ +M KG +P+ Y
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 387 SALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEM-K 445
+ LI LC G+ +A L +M K P+ +++L+ F + G +A ++ EM K
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 446 NNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVD 505
+ C + V Y+ LI G CK ++ E M V+++M RG+ + V Y+++IHGF A+ D
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408
Query: 506 QGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDI 565
+F QM+ + PD+ TYNILL+ N+ A+ V M + D +T
Sbjct: 409 NAQMVFKQMVSD--GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 566 FLKTL 570
++ L
Sbjct: 467 MIEAL 471
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 173/356 (48%), Gaps = 10/356 (2%)
Query: 88 LLQQMKRERRVFIEKNFIV---IFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVL 144
LL +M++ + IE + ++ I K + A +LF++ME + K V ++N ++
Sbjct: 237 LLNKMEKGK---IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK-GIKPDVFTYNPLI 292
Query: 145 NVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVF-RGIHLRN 203
+ + G + A S + + NI P+ + FN +I A K G + +A +++ + ++
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEK-NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 204 CAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAA 263
C PD Y+TL+ G CK R++E + + EM G N + LI + D A
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Query: 264 KLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGF 323
+ M G P+ +TYN L+DGLC G + A+ + M + VT+ T++
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471
Query: 324 VKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNT 383
K G+ DG + SL +G + N Y++++SG ++G E A L+ EM E G PN+
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNS 531
Query: 384 VVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAIL 439
Y+ LI R+G + E + EM++ G ++ T+ L+ G K+ L
Sbjct: 532 GTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRLDKSFL 586
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 145/506 (28%), Positives = 249/506 (49%), Gaps = 5/506 (0%)
Query: 66 DLSFYSLIEKLA-ASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLF 124
+L Y+++ K++ +F L M +E ++ + KA + A+ LF
Sbjct: 148 NLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELF 207
Query: 125 HRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALC 184
M +E V +N +++ ++E A+E + + + ++ PN T N++I L
Sbjct: 208 DEM-SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLS 266
Query: 185 KVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPF 244
K G VD ++++ + D YTYS+L+ GLC G +D+A S+ +E+ +
Sbjct: 267 KCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVV 326
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM 304
+N ++ C+ G + + +L M K V N V+YN L+ GL GK+++A + M
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLM 385
Query: 305 VANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKF 364
A + T+G +HG G + V+ +E G + Y Y+S+I L K+ +
Sbjct: 386 PAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRL 445
Query: 365 EHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSL 424
E A L KEM + G E N+ V +ALI GL R+ + EA +L EM G P +Y+ L
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNIL 505
Query: 425 MRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGI 484
+ G +AG +A KEM N + YSIL+ GLC++ K+ A+ +W Q L G+
Sbjct: 506 ICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL 565
Query: 485 KLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRA 544
+ DV+ ++ +IHG C+ +D M + M + ++ TYN L+ F++ + +RA
Sbjct: 566 ETDVMMHNILIHGLCSVGKLDDAMTVMANM--EHRNCTANLVTYNTLMEGFFKVGDSNRA 623
Query: 545 MDVLNIMLDQGCDPDFITCDIFLKTL 570
+ M G PD I+ + +K L
Sbjct: 624 TVIWGYMYKMGLQPDIISYNTIMKGL 649
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/518 (26%), Positives = 259/518 (50%), Gaps = 6/518 (1%)
Query: 51 IFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKA 110
+F S + G Y + ++ ++ +L+ + + +++ ++ + E + + K
Sbjct: 29 LFDSATRHPG-YAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKT 87
Query: 111 YGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQ 170
YGK P++A+++F RM F C+ ++S+N++LN ++ + + +++ ++ +
Sbjct: 88 YGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYF-ETAGVA 146
Query: 171 PNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSL 230
PN T+N++IK CK ++A + PD ++YST+++ L K G++D+A+ L
Sbjct: 147 PNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALEL 206
Query: 231 LDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCV-PNEVTYNTLVDGLC 289
DEM G P+ +N+LI K+ D A +L D + V PN T+N ++ GL
Sbjct: 207 FDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLS 266
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEY 349
+ G+++ + + +M N+ + T+ +L+HG G SV L+ER +
Sbjct: 267 KCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVV 326
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
Y++++ G + GK + +++LW+ +ME N V Y+ LI GL GK DEA M
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWR-IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLM 385
Query: 410 KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKL 469
KG+ + TY + G G +KA+ V +E++++ + + Y+ +I+ LCK +L
Sbjct: 386 PAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRL 445
Query: 470 MEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYN 529
EA + K+M G++L+ +++I G + + +M + +P V +YN
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM--GKNGCRPTVVSYN 503
Query: 530 ILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
IL+ + A + ML+ G PD T I L
Sbjct: 504 ILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 219/430 (50%), Gaps = 6/430 (1%)
Query: 71 SLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAE 130
S + K D + E ++Q +RE+ ++ + I G +KA ++F+ ++ E
Sbjct: 263 SGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNV---DKAESVFNELD-E 318
Query: 131 FHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVD 190
V ++N++L + G +LE + + ++ N +++N++IK L + G +D
Sbjct: 319 RKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV--NIVSYNILIKGLLENGKID 376
Query: 191 QAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLI 250
+A ++R + + A D TY + GLC G +++A+ ++ E++ G + + + +I
Sbjct: 377 EATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASII 436
Query: 251 SALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCV 310
LCKK L A+ LV MS G N N L+ GL R +L +A L +M N C
Sbjct: 437 DCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCR 496
Query: 311 PNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQL 370
P V++ L+ G K G+ + ++ + + E G + + YS L+ GL ++ K + A++L
Sbjct: 497 PTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALEL 556
Query: 371 WKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFE 430
W + ++ G E + ++++ LI GLC GK D+A + M+++ N TY++LM GFF+
Sbjct: 557 WHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFK 616
Query: 431 AGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVA 490
GD ++A ++W M + + Y+ ++ GLC + AM + + GI V
Sbjct: 617 VGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYT 676
Query: 491 YSSMIHGFCN 500
++ ++ N
Sbjct: 677 WNILVRAVVN 686
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 230/509 (45%), Gaps = 41/509 (8%)
Query: 62 YKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKN-FIVIFKAYGKAHFPEKA 120
+K S+ ++I LA + EL +M ER V + + ++ + K + A
Sbjct: 180 FKPDVFSYSTVINDLAKAGKLDDALELFDEMS-ERGVAPDVTCYNILIDGFLKEKDHKTA 238
Query: 121 VNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVI 180
+ L+ R+ + VK+ N +++ + + G L+ + + K + + T++ +I
Sbjct: 239 MELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERM-KQNEREKDLYTYSSLI 297
Query: 181 KALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTF 240
LC G VD+A VF + R + D TY+T++ G C+ G+I E++ L M+ + +
Sbjct: 298 HGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV 357
Query: 241 PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAV-- 298
N +N+LI L + G + A + M KG ++ TY + GLC G +NKA+
Sbjct: 358 -NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGV 416
Query: 299 ---------------------------------SLLNQMVANKCVPNDVTFGTLVHGFVK 325
+L+ +M + N L+ G ++
Sbjct: 417 MQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR 476
Query: 326 QGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVV 385
R + + L + + G R Y+ LI GL K GKF A KEM+E G +P+
Sbjct: 477 DSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKT 536
Query: 386 YSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMK 445
YS L+ GLCR+ K D A E + G + ++ L+ G G A+ V M+
Sbjct: 537 YSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANME 596
Query: 446 NNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVD 505
+ +C N V Y+ L+ G K G A ++W M G++ D+++Y++++ G C + V
Sbjct: 597 HRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVS 656
Query: 506 QGMKLFNQMLCQEAELQPDVATYNILLNA 534
M+ F+ + + P V T+NIL+ A
Sbjct: 657 YAMEFFDD--ARNHGIFPTVYTWNILVRA 683
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 99/205 (48%), Gaps = 1/205 (0%)
Query: 122 NLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIK 181
+ F R + C+ TV S+N ++ + + G F A F + ++ +P+ T+++++
Sbjct: 484 SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN-GWKPDLKTYSILLC 542
Query: 182 ALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFP 241
LC+ +D A+E++ D ++ L+ GLC G++D+A++++ M+
Sbjct: 543 GLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTA 602
Query: 242 NPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLL 301
N +N L+ K GD RA + M G P+ ++YNT++ GLC ++ A+
Sbjct: 603 NLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFF 662
Query: 302 NQMVANKCVPNDVTFGTLVHGFVKQ 326
+ + P T+ LV V +
Sbjct: 663 DDARNHGIFPTVYTWNILVRAVVNR 687
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 137/486 (28%), Positives = 247/486 (50%), Gaps = 5/486 (1%)
Query: 88 LLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVI 147
L Q+M R R + +F F A + ++ ++E + + N ++N
Sbjct: 75 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN-GIAHNIYTLNIMINCF 133
Query: 148 IQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPD 207
+ A V K L +P+ TFN +IK L G V +AV + + C PD
Sbjct: 134 CRCCKTCFAYSVLGKVMK-LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPD 192
Query: 208 SYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVD 267
TY+++++G+C+ G A+ LL +M+ + F ++ +I +LC+ G + A L
Sbjct: 193 VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 252
Query: 268 NMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQG 327
M KG + VTYN+LV GLC+ GK N LL MV+ + VPN +TF L+ FVK+G
Sbjct: 253 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG 312
Query: 328 RASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYS 387
+ + + + RG N Y++L+ G + + A + M+ C P+ V ++
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372
Query: 388 ALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNN 447
+LI G C + D+ + + +G + N+ TYS L++GF ++G A +++EM ++
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH 432
Query: 448 SCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQG 507
+ + Y IL++GLC NGKL +A+ +++ + + L +V Y+++I G C V+
Sbjct: 433 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 508 MKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
LF + C+ ++P+V TY ++++ ++ ++S A +L M + G P+ T + +
Sbjct: 493 WNLFCSLPCK--GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Query: 568 KT-LRD 572
+ LRD
Sbjct: 551 RAHLRD 556
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 123/396 (31%), Positives = 212/396 (53%), Gaps = 2/396 (0%)
Query: 119 KAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNL 178
+AV L RM E C+ V ++NS++N I + G AL+ + + N++ + T++
Sbjct: 176 EAVVLVDRM-VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM-EERNVKADVFTYST 233
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG 238
+I +LC+ G +D A+ +F+ + + TY++L+ GLCK G+ ++ LL +M
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAV 298
PN FNVL+ K+G L A +L M +G PN +TYNTL+DG C + +L++A
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 299 SLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGL 358
++L+ MV NKC P+ VTF +L+ G+ R DG V ++ +RG N YS L+ G
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 359 FKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNS 418
+ GK + A +L++EM+ G P+ + Y L+DGLC GK ++A E +++
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 419 FTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQ 478
Y++++ G + G A ++ + N + Y+++I+GLCK G L EA ++ ++
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 479 MLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
M G + Y+++I + KL +M
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 200/412 (48%), Gaps = 23/412 (5%)
Query: 225 DEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTL 284
D+A++L EM P+ F+ SA+ + + L G N T N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 285 VDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGH 344
++ CR K A S+L +++ P+ TF TL+ G +G+ S+ ++ + E G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 345 RGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE 404
+ + Y+S+++G+ + G A+ L ++M E+ + + YS +ID LCR+G D A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 405 YLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLC 464
EM+ KG + TY+SL+RG +AG + L+ K+M + N + +++L++
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 465 KNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPD 524
K GKL EA ++K+M++RGI +++ Y++++ G+C + + + + M+ + PD
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV--RNKCSPD 367
Query: 525 VATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFL 584
+ T+ L+ + + M V + +G + +T I ++ Q G+
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF------CQSGK--- 418
Query: 585 DELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
++L A ++ + M+ +LP+ T+ I++ LC + KA+
Sbjct: 419 ----IKL--------AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 2/173 (1%)
Query: 398 KADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYS 457
K D+A EM LP+ +S + + K+++ N HN +
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 458 ILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQ 517
I+IN C+ K A V +++ G + D ++++I G V + + L ++M+
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV-- 185
Query: 518 EAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
E QPDV TYN ++N + + S A+D+L M ++ D T + +L
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 229/447 (51%), Gaps = 4/447 (0%)
Query: 82 FASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFN 141
F +L +M R + +F + K + + ++LF +M+ + + N
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQI-LGIPPLLCTCN 122
Query: 142 SVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHL 201
V++ + RA F + K L +P+ +TF ++ C ++ A+ +F I
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMK-LGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILG 181
Query: 202 RNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIR 261
P+ TY+TL+ LCK ++ AV L ++M G+ PN +N L++ LC+ G
Sbjct: 182 MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD 241
Query: 262 AAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVH 321
AA L+ +M + PN +T+ L+D + GKL +A L N M+ P+ T+G+L++
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 322 GFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEP 381
G G + + +E G NE IY++LI G K + E M+++ EM +KG
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 382 NTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVW 441
NT+ Y+ LI G C G+ D A+E +M ++ P+ TY+ L+ G G KA++++
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 442 KEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNA 501
+ M+ + N V Y+I+I G+CK GK+ +A ++ + S+G+K +V+ Y++MI GFC
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 481
Query: 502 QLVDQGMKLFNQMLCQEAELQPDVATY 528
L+ + LF +M +E P+ + Y
Sbjct: 482 GLIHEADSLFKKM--KEDGFLPNESVY 506
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/443 (29%), Positives = 228/443 (51%), Gaps = 10/443 (2%)
Query: 120 AVNLFHRMEAEFHCKQ--TVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
A++LF RM H + ++ F +L+VI + + + + + + L I P T N
Sbjct: 67 ALDLFTRM---VHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM-QILGIPPLLCTCN 122
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLR-NCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQI 236
+V+ +C +A F G ++ PD T+++L++G C RI++A++L D++
Sbjct: 123 IVMHCVCLSSQPCRA-SCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILG 181
Query: 237 EGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNK 296
G PN + LI LCK L A +L + M G PN VTYN LV GLC G+
Sbjct: 182 MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD 241
Query: 297 AVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLIS 356
A LL M+ + PN +TF L+ FVK G+ + + + + + + Y SLI+
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 357 GLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLP 416
GL G + A Q++ M GC PN V+Y+ LI G C+ + ++ + EM KG +
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 417 NSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVW 476
N+ TY+ L++G+ G A V+ +M + + Y++L++GLC NGK+ +A+M++
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 477 KQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFY 536
+ M R + +++V Y+ +I G C V+ LF + + ++P+V TY +++ F
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG--MKPNVITYTTMISGFC 479
Query: 537 QQNNISRAMDVLNIMLDQGCDPD 559
++ I A + M + G P+
Sbjct: 480 RRGLIHEADSLFKKMKEDGFLPN 502
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 199/382 (52%), Gaps = 4/382 (1%)
Query: 190 DQAVEVF-RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNV 248
+ A+++F R +H R P ++ L+ + K R D +SL ++MQI G P N+
Sbjct: 65 NDALDLFTRMVHSRP-LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK 308
++ +C RA+ + M G P+ VT+ +L++G C ++ A++L +Q++
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 309 CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAM 368
PN VT+ TL+ K + + + G R N Y++L++GL + G++ A
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 369 QLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGF 428
L ++MM++ EPN + ++ALID + GK EA+E M P+ FTY SL+ G
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
G +A ++ M+ N C NEV Y+ LI+G CK+ ++ + M ++ +M +G+ +
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 489 VAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL 548
+ Y+ +I G+C D ++FNQM + A PD+ TYN+LL+ + +A+ +
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAP--PDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 549 NIMLDQGCDPDFITCDIFLKTL 570
M + D + +T I ++ +
Sbjct: 422 EYMRKREMDINIVTYTIIIQGM 443
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 185/413 (44%), Gaps = 23/413 (5%)
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
+ ++A+ L M P+ F L+S + K L + M + G P T N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER 342
++ +C + +A L +M+ P+ VTF +L++G+ R D ++ +
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 343 GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
G + N Y++LI L K HA++L+ +M G PN V Y+AL+ GLC G+ +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 403 REYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILING 462
L +M + PN T+++L+ F + G +A ++ M S + Y LING
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 463 LCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQ 522
LC G L EA ++ M G + V Y+++IHGFC ++ V+ GMK+F +M + +
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM--SQKGVV 360
Query: 523 PDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGRE 582
+ TY +L+ + A +V N M + PD T ++ L DG
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL-----------DG-- 407
Query: 583 FLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKA 635
L + A I E M R + T+ I++Q +CK + A
Sbjct: 408 --------LCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDA 452
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 159/375 (42%), Gaps = 23/375 (6%)
Query: 262 AAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVH 321
A L M +P+ + + L+ + + + + +SL QM P T ++H
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 322 GFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEP 381
+ + L + + G + ++SL++G + E A+ L+ +++ G +P
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 382 NTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVW 441
N V Y+ LI LC+ + A E +M G PN TY++L+ G E G A +
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 442 KEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNA 501
++M N + ++ LI+ K GKLMEA ++ M+ + DV Y S+I+G C
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 502 QLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFI 561
L+D+ ++F M + P+ Y L++ F + + M + M +G + I
Sbjct: 307 GLLDEARQMFYLM--ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI 364
Query: 562 TCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAI 621
T + ++ LV R A ++ M R P+ T+ +
Sbjct: 365 TYTVLIQGYC-------------------LVGRPDV--AQEVFNQMSSRRAPPDIRTYNV 403
Query: 622 VVQQLCKPRNIRKAI 636
++ LC + KA+
Sbjct: 404 LLDGLCCNGKVEKAL 418
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 218 bits (556), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 139/486 (28%), Positives = 242/486 (49%), Gaps = 40/486 (8%)
Query: 124 FHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKAL 183
+ RMEA+ + + +++N + + G+ A F S + K + + + +L++
Sbjct: 183 YRRMEADGFVVGMI-DYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL-GF 240
Query: 184 CKVGLVDQAVEVFRGIHLR-NCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPN 242
C+ + A++VF + CAP+S +YS L+ GLC+ GR++EA L D+M +G P+
Sbjct: 241 CRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPS 300
Query: 243 PFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLN 302
+ VLI ALC +G + +A L D M +GC PN TY L+DGLCR GK+ +A +
Sbjct: 301 TRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCR 360
Query: 303 QMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEG 362
+MV ++ P+ +T+ L++G+ K GR +L +E+R + N ++ L+ GL + G
Sbjct: 361 KMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVG 420
Query: 363 KFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYS 422
K A+ L K M++ G P+ V Y+ LIDGLCREG + A + L M P+ T++
Sbjct: 421 KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFT 480
Query: 423 SLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK----- 477
+++ F + G A M + +EV + LI+G+CK GK +A+ + +
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKM 540
Query: 478 -------------QMLSRGIKL-----------------DVVAYSSMIHGFCNAQLVDQG 507
MLS+G K+ VV Y++++ G + +
Sbjct: 541 RILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGS 600
Query: 508 MKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
++ M + + P+V Y I++N Q + A +L+ M D G P+ +T + +
Sbjct: 601 FRILELM--KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMV 658
Query: 568 KTLRDN 573
K +N
Sbjct: 659 KGYVNN 664
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/453 (28%), Positives = 217/453 (47%), Gaps = 71/453 (15%)
Query: 120 AVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLV 179
A+ +F M E C S++ +++ + + G A + + QP+ T+ ++
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK-GCQPSTRTYTVL 307
Query: 180 IKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGT 239
IKALC GL+D+A +F + R C P+ +TY+ L+DGLC++G+I+EA + +M +
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 240 FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNE--------------------- 278
FP+ +N LI+ CK G ++ A +L+ M + C PN
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427
Query: 279 --------------VTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFV 324
V+YN L+DGLCR+G +N A LL+ M P+ +TF +++ F
Sbjct: 428 LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC 487
Query: 325 KQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE------------------H 366
KQG+A ++ L + +G +E ++LI G+ K GK H
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPH 547
Query: 367 AMQLWKEMMEKGCE-----------------PNTVVYSALIDGLCREGKADEAREYLIEM 409
++ + +M+ KGC+ P+ V Y+ L+DGL R G + L M
Sbjct: 548 SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM 607
Query: 410 KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKL 469
K G LPN + Y+ ++ G + G +A + M+++ + N V Y++++ G NGKL
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL 667
Query: 470 MEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQ 502
A+ + M+ RG +L+ YSS++ GF +Q
Sbjct: 668 DRALETVRAMVERGYELNDRIYSSLLQGFVLSQ 700
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 213/476 (44%), Gaps = 54/476 (11%)
Query: 211 YSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMS 270
YS+L+ L K A M+ +G + +++ALCK G AA++ +
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNG-YTEAAEMFMSKI 221
Query: 271 LK-GCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVAN-KCVPNDVTFGTLVHGFVKQGR 328
LK G V + +L+ G CR L A+ + + M C PN V++ L+HG + GR
Sbjct: 222 LKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGR 281
Query: 329 ASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSA 388
+ + + E+G + + Y+ LI L G + A L+ EM+ +GC+PN Y+
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV 341
Query: 389 LIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNS 448
LIDGLCR+GK +EA +M P+ TY++L+ G+ + G A + M+ +
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401
Query: 449 CNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGM 508
C N ++ L+ GLC+ GK +A+ + K+ML G+ D+V+Y+ +I G C ++
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAY 461
Query: 509 KLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLK 568
KL + M C +++PD T+ ++NAF +Q A L +ML +G D +T +
Sbjct: 462 KLLSSMNC--FDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519
Query: 569 TL------RDNM------------NPPQDGREFLD------------------------- 585
+ RD + P LD
Sbjct: 520 GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVP 579
Query: 586 ------ELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKA 635
LV L++ G+ +I+E+M LP + I++ LC+ + +A
Sbjct: 580 SVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEA 635
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 189/396 (47%), Gaps = 35/396 (8%)
Query: 102 KNFIVIFKAYGKAHFPEKAVNLFHRM--------------------------EAEFHCKQ 135
+ + V+ KA +KA NLF M EA C++
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361
Query: 136 TVK--------SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVG 187
VK ++N+++N ++G A E + V + +PN TFN +++ LC+VG
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELLT-VMEKRACKPNVRTFNELMEGLCRVG 420
Query: 188 LVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFN 247
+AV + + + +PD +Y+ L+DGLC+EG ++ A LL M P+ F
Sbjct: 421 KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFT 480
Query: 248 VLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVAN 307
+I+A CK+G A+ + M KG +EVT TL+DG+C+ GK A+ +L +V
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKM 540
Query: 308 KCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHA 367
+ + + ++ K + + ++L + + G + Y++L+ GL + G +
Sbjct: 541 RILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGS 600
Query: 368 MQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRG 427
++ + M GC PN Y+ +I+GLC+ G+ +EA + L M++ G PN TY+ +++G
Sbjct: 601 FRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG 660
Query: 428 FFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGL 463
+ G +A+ + M N+ YS L+ G
Sbjct: 661 YVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/493 (23%), Positives = 234/493 (47%), Gaps = 29/493 (5%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
+++ +LI ELL M++ + F + + + P KAV+L R
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKR 431
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
M + + S+N +++ + +EGH + A + S + +I+P+ LTF +I A CK
Sbjct: 432 M-LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM-NCFDIEPDCLTFTAIINAFCKQ 489
Query: 187 GLVDQAVEVFRGIHLR-NCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFV 245
G D A F G+ LR + D T +TL+DG+CK G+ +A+ +L+ + P
Sbjct: 490 GKADVA-SAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHS 548
Query: 246 FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
NV++ L K + ++ ++ G VP+ VTY TLVDGL R G + + +L M
Sbjct: 549 LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMK 608
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE 365
+ C+PN + +++G + GR + +L ++++ G N Y+ ++ G GK +
Sbjct: 609 LSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLD 668
Query: 366 HAMQLWKEMMEKGCEPNTVVYSALIDG--LCREGKADEAREYLIEMKNKGHLPNSFTYSS 423
A++ + M+E+G E N +YS+L+ G L ++G + + ++ + P +
Sbjct: 669 RALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECI--NE 726
Query: 424 LMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRG 483
L+ + G C + ++ L+ LCK G+ E+ + + +L RG
Sbjct: 727 LISVVEQLGGCISGLCIF-----------------LVTRLCKEGRTDESNDLVQNVLERG 769
Query: 484 IKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISR 543
+ L+ A ++ +C+ + + M+L +L ++ P ++ +++ ++ + R
Sbjct: 770 VFLE-KAMDIIMESYCSKKKHTKCMELITLVL--KSGFVPSFKSFCLVIQGLKKEGDAER 826
Query: 544 AMD-VLNIMLDQG 555
A + V+ ++ G
Sbjct: 827 ARELVMELLTSNG 839
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 144/327 (44%), Gaps = 55/327 (16%)
Query: 343 GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
G R N YSSL+ L K A ++ M G + Y +++ LC+ G + A
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214
Query: 403 REYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEM-KNNSCNHNEVCYSILIN 461
++ ++ G + +S +SL+ GF + A+ V+ M K +C N V YSILI+
Sbjct: 215 EMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIH 274
Query: 462 GLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM------- 514
GLC+ G+L EA + QM +G + Y+ +I C+ L+D+ LF++M
Sbjct: 275 GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKP 334
Query: 515 -----------LCQEAELQ---------------PDVATYNILLNAFYQQNNISRAMDVL 548
LC++ +++ P V TYN L+N + + + A ++L
Sbjct: 335 NVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELL 394
Query: 549 NIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVML 608
+M + C P+ T +EL+ L + + A +++ ML
Sbjct: 395 TVMEKRACKPNVRT---------------------FNELMEGLCRVGKPYKAVHLLKRML 433
Query: 609 DRCLLPEASTWAIVVQQLCKPRNIRKA 635
D L P+ ++ +++ LC+ ++ A
Sbjct: 434 DNGLSPDIVSYNVLIDGLCREGHMNTA 460
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 28/240 (11%)
Query: 400 DEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSIL 459
DE RE G N YSSL+ + A + ++ M+ + + Y +
Sbjct: 148 DELREVF------GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTI 201
Query: 460 INGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEA 519
+N LCKNG A M ++L G LD +S++ GFC + +K+F+ M +E
Sbjct: 202 VNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVM-SKEV 260
Query: 520 ELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQD 579
P+ +Y+IL++ + + A + + M ++GC P T + +K L D
Sbjct: 261 TCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCD------- 313
Query: 580 GREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAISEC 639
R +D+ A + + M+ R P T+ +++ LC+ I +A C
Sbjct: 314 -RGLIDK-------------AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/492 (25%), Positives = 247/492 (50%), Gaps = 3/492 (0%)
Query: 71 SLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAE 130
S ++ LA F +E++L ++ E + + AY ++ KAV ++ +
Sbjct: 104 SFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVEL 163
Query: 131 FHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVD 190
+ V + NS+L+++++ A + Y +C + N T +++K +C G V+
Sbjct: 164 YDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTC-ILVKGMCNEGKVE 222
Query: 191 QAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLI 250
++ G + C P+ Y+T++ G CK G I+ A + E++++G P F +I
Sbjct: 223 VGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMI 282
Query: 251 SALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCV 310
+ CK+GD + + +L+ + +G + N ++D R G + ++AN C
Sbjct: 283 NGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCK 342
Query: 311 PNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQL 370
P+ T+ L++ K+G+ L ++G N Y+ LI K +++ A +L
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 371 WKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFE 430
+M E+GC+P+ V Y LI GL G D+A +++ ++G P++ Y+ LM G +
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 431 AGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVA 490
G A L++ EM + + + Y+ LI+G ++G EA V+ + +G+K+DVV
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 491 YSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNI 550
+++MI GFC + ++D+ + N+M E L PD TY+ +++ + +Q +++ A+ +
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRM--NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRY 580
Query: 551 MLDQGCDPDFIT 562
M C P+ +T
Sbjct: 581 MEKNKCKPNVVT 592
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 210/406 (51%), Gaps = 4/406 (0%)
Query: 136 TVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEV 195
T+++F +++N +EG F + S V K ++ + N +I A + G E
Sbjct: 274 TLETFGTMINGFCKEGDFVASDRLLSEV-KERGLRVSVWFLNNIIDAKYRHGYKVDPAES 332
Query: 196 FRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCK 255
I +C PD TY+ L++ LCKEG+ + AV LDE +G PN + LI A CK
Sbjct: 333 IGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCK 392
Query: 256 KGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVT 315
+ A+KL+ M+ +GC P+ VTY L+ GL G ++ AV++ +++ P+
Sbjct: 393 SKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAI 452
Query: 316 FGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM 375
+ L+ G K GR + + +R + Y+Y++LI G + G F+ A +++ +
Sbjct: 453 YNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSV 512
Query: 376 EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCH 435
EKG + + V ++A+I G CR G DEA + M + +P+ FTYS+++ G+ + D
Sbjct: 513 EKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMA 572
Query: 436 KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
AI +++ M+ N C N V Y+ LING C G A +K+M R + +VV Y+++I
Sbjct: 573 TAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Query: 496 HGFCN-AQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNN 540
+ +++ + + M+ + P+ T+N LL F ++ +
Sbjct: 633 RSLAKESSTLEKAVYYWELMMTNKC--VPNEVTFNCLLQGFVKKTS 676
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 137/541 (25%), Positives = 248/541 (45%), Gaps = 60/541 (11%)
Query: 68 SFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFI--VIFKAYGKAHFPEKAVNLFH 125
+F ++I DF + + LL ++K ER + + F+ +I Y + + A ++
Sbjct: 277 TFGTMINGFCKEGDFVASDRLLSEVK-ERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGW 335
Query: 126 RMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCK 185
+ + CK V ++N ++N + +EG A+ F K + PN L++ +I+A CK
Sbjct: 336 IIAND--CKPDVATYNILINRLCKEGKKEVAVGFLDEASKK-GLIPNNLSYAPLIQAYCK 392
Query: 186 VGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFV 245
D A ++ + R C PD TY L+ GL G +D+AV++ ++ G P+ +
Sbjct: 393 SKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAI 452
Query: 246 FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
+N+L+S LCK G + A L M + +P+ Y TL+DG R G ++A + + V
Sbjct: 453 YNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSV 512
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE 365
+ V ++ GF + G + + + + E +++ YS++I G K+
Sbjct: 513 EKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMA 572
Query: 366 HAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
A+++++ M + C+PN V Y++LI+G C +G A E EM+ + +PN TY++L+
Sbjct: 573 TAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Query: 426 RGFF-EAGDCHKAILVWKEMKNNSCNHNEVCYSILING---------------------- 462
R E+ KA+ W+ M N C NEV ++ L+ G
Sbjct: 633 RSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSS 692
Query: 463 ---------------------------LCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
LC +G + A M +M+ +G D V++++++
Sbjct: 693 LFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAIL 752
Query: 496 HGFCNAQLVDQGMKLFNQMLCQEAELQPDVAT-YNILLNAFYQQNNISRAMDVLNIMLDQ 554
HGFC +V + N C E +VA Y+ +L Q I A +L+ M+++
Sbjct: 753 HGFC---VVGNSKQWRNMDFCNLGEKGLEVAVRYSQVLEQHLPQPVICEASTILHAMVEK 809
Query: 555 G 555
Sbjct: 810 A 810
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 162/359 (45%), Gaps = 17/359 (4%)
Query: 292 GKLNKAVSLLNQMVA-NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYI 350
G L+KAV + + +V VP+ + +L+ VK R D V + +RG + Y
Sbjct: 148 GSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYS 207
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
L+ G+ EGK E +L + KGC PN V Y+ +I G C+ G + A E+K
Sbjct: 208 TCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELK 267
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
KG +P T+ +++ GF + GD + + E+K + + +I+ ++G +
Sbjct: 268 LKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKV 327
Query: 471 EAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNI 530
+ +++ K DV Y+ +I+ C + + ++ + L P+ +Y
Sbjct: 328 DPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDE--ASKKGLIPNNLSYAP 385
Query: 531 LLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL--RDNMNPPQDGR-EFLDE- 586
L+ A+ + A +L M ++GC PD +T I + L +M+ + + + +D
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 587 ----------LVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKA 635
L+ L K R + A + MLDR +LP+A +A ++ + + +A
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 122/280 (43%), Gaps = 24/280 (8%)
Query: 352 SSLISGLFKEGKFEHAMQLWKEMME-KGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
S ++ + G A++++ ++E P+ + ++L+ L + + +AR+ EM
Sbjct: 138 SHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMC 197
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
++G ++++ L++G G + + C N V Y+ +I G CK G +
Sbjct: 198 DRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIE 257
Query: 471 EAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNI 530
A +V+K++ +G + + +MI+GFC +L +++ +E L+ V N
Sbjct: 258 NAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEV--KERGLRVSVWFLNN 315
Query: 531 LLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVR 590
+++A Y+ + + ++ C PD T +I L+ R
Sbjct: 316 IIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNI---------------------LINR 354
Query: 591 LVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPR 630
L K + A ++ + L+P ++A ++Q CK +
Sbjct: 355 LCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSK 394
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 151/551 (27%), Positives = 268/551 (48%), Gaps = 46/551 (8%)
Query: 52 FKSGSHKWGS---------YKLGDLSFYSLIEKLAASSDFASLEE------LLQQMKRER 96
KSGSH + S Y + FY+ ++ F + L ++M+ R
Sbjct: 77 LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136
Query: 97 RVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRA 156
+F ++ K + H +++ F ++ + + V +FN++L+ + E A
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKL-TKLGFQPDVVTFNTLLHGLCLEDRISEA 195
Query: 157 LEFYSHVCKS--------------LNIQPNGLTFNLVIKALCKVGLVDQAVE-----VFR 197
L + ++ ++ + + P +TFN +I LC G V +A V +
Sbjct: 196 LALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK 255
Query: 198 GIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKG 257
G+H+ D TY T+++G+CK G A++LL +M+ P+ +++ +I LCK G
Sbjct: 256 GLHI-----DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310
Query: 258 DLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFG 317
A L M KG PN TYN ++DG C G+ + A LL M+ + P+ +TF
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370
Query: 318 TLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEK 377
L+ VK+G+ + + + R + Y+S+I G K +F+ A K M +
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDL 426
Query: 378 GCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKA 437
P+ V ++ +ID CR + DE + L E+ +G + N+ TY++L+ GF E + + A
Sbjct: 427 MASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486
Query: 438 ILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHG 497
+++EM ++ + + +IL+ G C+N KL EA+ +++ + I LD VAY+ +IHG
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Query: 498 FCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCD 557
C VD+ LF + E PDV TYN++++ F ++ IS A + + M D G +
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVE--PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604
Query: 558 PDFITCDIFLK 568
PD T + ++
Sbjct: 605 PDNSTYNTLIR 615
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/497 (26%), Positives = 246/497 (49%), Gaps = 14/497 (2%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
LS + + KL D + LL + E R+ + +F + F E AV LF +
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRI---SEALALFGYMVETGFLE-AVALFDQ 216
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSH-VCKSLNIQPNGLTFNLVIKALCK 185
M E V +FN+++N + EG A + V K L+I + +T+ ++ +CK
Sbjct: 217 M-VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI--DVVTYGTIVNGMCK 273
Query: 186 VGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFV 245
+G A+ + + + PD YS ++D LCK+G +A L EM +G PN F
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 246 FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
+N +I C G A +L+ +M + P+ +T+N L+ ++GKL +A L ++M+
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE 365
P+ VT+ ++++GF K R D + + + ++++I + + +
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVD 449
Query: 366 HAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
MQL +E+ +G NT Y+ LI G C + A++ EM + G P++ T + L+
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 426 RGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIK 485
GF E +A+ +++ ++ + + + V Y+I+I+G+CK K+ EA ++ + G++
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 486 LDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAM 545
DV Y+ MI GFC + LF++M ++ +PD +TYN L+ + I +++
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKM--KDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627
Query: 546 DVLNIMLDQGCDPDFIT 562
++++ M G D T
Sbjct: 628 ELISEMRSNGFSGDAFT 644
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 219/468 (46%), Gaps = 73/468 (15%)
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
R D A+SL +M+I N + FN+LI C L + ++ G P+ VT+N
Sbjct: 121 RPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFN 180
Query: 283 TLVDGLCRKGKLNKA---------------VSLLNQMVANKCVPNDVTFGTLVHGFVKQG 327
TL+ GLC + ++++A V+L +QMV P +TF TL++G +G
Sbjct: 181 TLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEG 240
Query: 328 RASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYS 387
R + A+++ + +G + Y ++++G+ K G + A+ L +M E +P+ V+YS
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300
Query: 388 ALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNN 447
A+ID LC++G +A+ EM KG PN FTY+ ++ GF G A + ++M
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Query: 448 SCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCN------- 500
N + + ++ LI+ K GKL EA + +ML R I D V Y+SMI+GFC
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 501 ------------------------AQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFY 536
A+ VD+GM+L ++ L + TYN L++ F
Sbjct: 421 KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI--SRRGLVANTTTYNTLIHGFC 478
Query: 537 QQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQR 596
+ +N++ A D+ M+ G PD ITC+I L +N E L+E
Sbjct: 479 EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN--------EKLEE---------- 520
Query: 597 TIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAISECWSRLC 644
A ++ EV+ + + + I++ +CK + E W C
Sbjct: 521 ---ALELFEVIQMSKIDLDTVAYNIIIHGMCKG----SKVDEAWDLFC 561
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 167/362 (46%), Gaps = 19/362 (5%)
Query: 66 DLSFYS-LIEKLAASSDFASLEELLQQMKRE---RRVFIEKNFIVIFKAYGKAHFPEKAV 121
D+ YS +I++L + + L +M + VF I F ++G+ ++ +
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 122 NLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYS---HVCKSLNIQPNGLTFNL 178
R E V +FN++++ ++EG A + H C I P+ +T+N
Sbjct: 355 ----RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC----IFPDTVTYNS 406
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG 238
+I CK D A +F + +PD T++T++D C+ R+DE + LL E+ G
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAV 298
N +N LI C+ +L A L M G P+ +T N L+ G C KL +A+
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 299 SLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGL 358
L + +K + V + ++HG K + + + SL G + Y+ +ISG
Sbjct: 523 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Query: 359 FKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNS 418
+ A L+ +M + G EP+ Y+ LI G + G+ D++ E + EM++ G ++
Sbjct: 583 CGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
Query: 419 FT 420
FT
Sbjct: 643 FT 644
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 124/268 (46%), Gaps = 5/268 (1%)
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRG 198
++NS++ + F A + L P+ +TFN +I C+ VD+ +++ R
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFD-----LMASPDVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 199 IHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGD 258
I R ++ TY+TL+ G C+ ++ A L EM G P+ N+L+ C+
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 259 LIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
L A +L + + + + V YN ++ G+C+ K+++A L + + P+ T+
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 319 LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG 378
++ GF + SD + +++ GH + Y++LI G K G+ + +++L EM G
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Query: 379 CEPNTVVYSALIDGLCREGKADEAREYL 406
+ + +CR + YL
Sbjct: 638 FSGDAFTIKMAEEIICRVSDEEIIENYL 665
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/419 (30%), Positives = 227/419 (54%), Gaps = 12/419 (2%)
Query: 51 IFKSGSHKWGSYKLGDLS-FYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFK 109
+F S + ++ + + D S F ++ +L +++ F + E+L+ +MK E V E + I +
Sbjct: 35 VFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICR 94
Query: 110 AYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNI 169
YG+ H P ++ +FH+M+ +F C + K++ +VL ++++E + A +FY ++ + + +
Sbjct: 95 GYGRVHRPFDSLRVFHKMK-DFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNM-REIGL 152
Query: 170 QPNGLTFNLVIKALCK-VGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAV 228
P + N++IKALC+ G VD +++F + R C PDSYTY TL+ GLC+ GRIDEA
Sbjct: 153 PPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAK 212
Query: 229 SLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGL 288
L EM + P + LI+ LC ++ A + ++ M KG PN TY++L+DGL
Sbjct: 213 KLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGL 272
Query: 289 CRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNE 348
C+ G+ +A+ L M+A C PN VT+ TL+ G K+ + + +L + +G + +
Sbjct: 273 CKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDA 332
Query: 349 YIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVY-------SALIDGLCREGKADE 401
+Y +ISG KF A EM+ G PN + + + ++ GLC +
Sbjct: 333 GLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRA 392
Query: 402 AREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILI 460
YL M+++G T SL++ + G+ KA+ + E+ + C ++ + +LI
Sbjct: 393 FTLYL-SMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 172/358 (48%), Gaps = 32/358 (8%)
Query: 274 CVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVK-QGRASDG 332
C P++ Y T++ L + +LN A M P + L+ + G G
Sbjct: 117 CDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAG 176
Query: 333 ASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDG 392
+ + + +RG + Y Y +LISGL + G+ + A +L+ EM+EK C P V Y++LI+G
Sbjct: 177 LKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING 236
Query: 393 LCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHN 452
LC DEA YL EMK+KG PN FTYSSLM G + G +A+ +++ M C N
Sbjct: 237 LCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN 296
Query: 453 EVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFN 512
V Y+ LI GLCK K+ EA+ + +M +G+K D Y +I GFC + +
Sbjct: 297 MVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLD 356
Query: 513 QMLCQEAELQPDVATYNILLNAFYQ------QNNISRAMDVLNIMLDQGCDPDFITCDIF 566
+M+ + P+ T+NI + + N SRA + M +G I+ ++
Sbjct: 357 EMIL--GGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRG-----ISVEV- 408
Query: 567 LKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKII-EVMLDRCLLPEASTWAIVV 623
E L+ LV L K+ A +++ E++ D C +P TW +++
Sbjct: 409 ---------------ETLESLVKCLCKKGEFQKAVQLVDEIVTDGC-IPSKGTWKLLI 450
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 127/295 (43%), Gaps = 24/295 (8%)
Query: 343 GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
G+ ++ + ++ L KF+ A L M + C + + ++ G R + ++
Sbjct: 46 GYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDS 105
Query: 403 REYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILING 462
+MK+ P+ Y +++ E + A +K M+ ++LI
Sbjct: 106 LRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKA 165
Query: 463 LCKNGKLMEA-MMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAEL 521
LC+N ++A + ++ +M RG D Y ++I G C +D+ KLF +M+ E +
Sbjct: 166 LCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMV--EKDC 223
Query: 522 QPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGR 581
P V TY L+N N+ AM L M +G +P+ T + DG
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLM-----------DG- 271
Query: 582 EFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
L K R++ A ++ E+M+ R P T+ ++ LCK + I++A+
Sbjct: 272 ---------LCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAV 317
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 143/540 (26%), Positives = 255/540 (47%), Gaps = 24/540 (4%)
Query: 106 VIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCK 165
++ + Y + + ++ +F R+ + +V + N++L +++ G F + K
Sbjct: 168 ILIRVYLREGMIQDSLEIF-RLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLK 226
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
I P+ TFN++I LC G +++ + + + AP TY+T++ CK+GR
Sbjct: 227 R-KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
A+ LLD M+ +G + +N+LI LC+ + + L+ +M + PNEVTYNTL+
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345
Query: 286 DGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR 345
+G +GK+ A LLN+M++ PN VTF L+ G + +G + + +E +G
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 405
Query: 346 GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREY 405
+E Y L+ GL K +F+ A + M G + Y+ +IDGLC+ G DEA
Sbjct: 406 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 465
Query: 406 LIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCK 465
L EM G P+ TYS+L+ GF + G A + + + N + YS LI C+
Sbjct: 466 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 525
Query: 466 NGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAE-LQPD 524
G L EA+ +++ M+ G D ++ ++ C A V + + M C ++ + P+
Sbjct: 526 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF---MRCMTSDGILPN 582
Query: 525 VATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT----------------CDIFLK 568
+++ L+N + +A V + M G P F T + FLK
Sbjct: 583 TVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK 642
Query: 569 TLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCK 628
+L + P + L+ + K A + M+ R +LP++ T+ ++ LC+
Sbjct: 643 SL--HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 700
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/571 (24%), Positives = 272/571 (47%), Gaps = 26/571 (4%)
Query: 66 DLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFH 125
++S+ L++ L +++F +MKR + + K F ++AV L +
Sbjct: 408 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 467
Query: 126 RMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCK 185
M + + ++++++N + G F A E + + + + PNG+ ++ +I C+
Sbjct: 468 EMSKD-GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR-VGLSPNGIIYSTLIYNCCR 525
Query: 186 VGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFV 245
+G + +A+ ++ + L D +T++ L+ LCK G++ EA + M +G PN
Sbjct: 526 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 585
Query: 246 FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
F+ LI+ G+ ++A + D M+ G P TY +L+ GLC+ G L +A L +
Sbjct: 586 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE 365
A + V + TL+ K G + S+ + +R + Y Y+SLISGL ++GK
Sbjct: 646 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705
Query: 366 HAMQLWKEMMEKG-CEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSL 424
A+ KE +G PN V+Y+ +DG+ + G+ + +M N GH P+ T +++
Sbjct: 706 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 765
Query: 425 MRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGI 484
+ G+ G K + EM N + N Y+IL++G K + + ++++ ++ GI
Sbjct: 766 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 825
Query: 485 KLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRA 544
D + S++ G C + +++ G+K+ +C+ E+ D T+N+L++ I+ A
Sbjct: 826 LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV--DRYTFNMLISKCCANGEINWA 883
Query: 545 MDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKII 604
D++ +M G D TCD + L N + Q+ R L E
Sbjct: 884 FDLVKVMTSLGISLDKDTCDAMVSVLNRN-HRFQESRMVLHE------------------ 924
Query: 605 EVMLDRCLLPEASTWAIVVQQLCKPRNIRKA 635
M + + PE+ + ++ LC+ +I+ A
Sbjct: 925 --MSKQGISPESRKYIGLINGLCRVGDIKTA 953
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 146/526 (27%), Positives = 251/526 (47%), Gaps = 27/526 (5%)
Query: 106 VIFKAYGKAHFPE----KAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYS 161
V F A H E +A+ +F+ MEA+ V S+ +L+ + + F A FY
Sbjct: 374 VTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV-SYGVLLDGLCKNAEFDLARGFY- 431
Query: 162 HVCKSLNIQPNG-----LTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMD 216
+ ++ NG +T+ +I LCK G +D+AV + + PD TYS L++
Sbjct: 432 -----MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 486
Query: 217 GLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVP 276
G CK GR A ++ + G PN +++ LI C+ G L A ++ + M L+G
Sbjct: 487 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 546
Query: 277 NEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVL 336
+ T+N LV LC+ GK+ +A + M ++ +PN V+F L++G+ G SV
Sbjct: 547 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 606
Query: 337 ISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCRE 396
+ + GH + Y SL+ GL K G A + K + +TV+Y+ L+ +C+
Sbjct: 607 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 666
Query: 397 GKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMK-NNSCNHNEVC 455
G +A EM + LP+S+TY+SL+ G G AIL KE + + N+V
Sbjct: 667 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 726
Query: 456 YSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
Y+ ++G+ K G+ + +QM + G D+V ++MI G+ +++ L +M
Sbjct: 727 YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 786
Query: 516 CQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITC-DIFLKTLRDNM 574
Q P++ TYNILL+ + ++ ++S + + ++ G PD +TC + L NM
Sbjct: 787 NQNG--GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 844
Query: 575 NPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWA 620
+ G + L + R V+ R +++ +C WA
Sbjct: 845 --LEIGLKILKAFICRGVEVDRY-----TFNMLISKCCANGEINWA 883
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 204/402 (50%), Gaps = 8/402 (1%)
Query: 172 NGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLL 231
N ++++I+ + G++ ++E+FR + L P YT + ++ + K G S L
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221
Query: 232 DEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRK 291
EM P+ FN+LI+ LC +G +++ L+ M G P VTYNT++ C+K
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281
Query: 292 GKLNKAVSLLNQMVANKCVPNDV-TFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYI 350
G+ A+ LL+ M +K V DV T+ L+H + R + G +L + +R NE
Sbjct: 282 GRFKAAIELLDHM-KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
Y++LI+G EGK A QL EM+ G PN V ++ALIDG EG EA + M+
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 400
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
KG P+ +Y L+ G + + A + MK N + Y+ +I+GLCKNG L
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 460
Query: 471 EAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQ--EAELQPDVATY 528
EA+++ +M GI D+V YS++I+GFC K +++C+ L P+ Y
Sbjct: 461 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR----FKTAKEIVCRIYRVGLSPNGIIY 516
Query: 529 NILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
+ L+ + + A+ + M+ +G D T ++ + +L
Sbjct: 517 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL 558
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 208/468 (44%), Gaps = 45/468 (9%)
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRG 198
++N+++N EG A + + + S + PN +TFN +I G +A+++F
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEML-SFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 398
Query: 199 IHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGD 258
+ + P +Y L+DGLCK D A M+ G + +I LCK G
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 458
Query: 259 LIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
L A L++ MS G P+ VTY+ L++G C+ G+ A ++ ++ PN + + T
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 319 LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG 378
L++ + G + + ++ GH + + ++ L++ L K GK A + + M G
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578
Query: 379 CEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAI 438
PNTV + LI+G G+ +A EM GH P FTY SL++G + G +A
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638
Query: 439 LVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGF 498
K + + V Y+ L+ +CK+G L +A+ ++ +M+ R I D Y+S+I G
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698
Query: 499 CNAQLVDQGMKLFNQMLCQEAELQ------------------------------------ 522
C +G + + +EAE +
Sbjct: 699 CR-----KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 753
Query: 523 ---PDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
PD+ T N +++ + + I + D+L M +Q P+ T +I L
Sbjct: 754 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 801
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 179/360 (49%), Gaps = 2/360 (0%)
Query: 202 RNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIR 261
R C + Y L+ +EG I +++ + M + G P+ + N ++ ++ K G+ +
Sbjct: 157 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 216
Query: 262 AAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVH 321
+ M + P+ T+N L++ LC +G K+ L+ +M + P VT+ T++H
Sbjct: 217 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276
Query: 322 GFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEP 381
+ K+GR +L ++ +G + Y+ LI L + + L ++M ++ P
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 336
Query: 382 NTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVW 441
N V Y+ LI+G EGK A + L EM + G PN T+++L+ G G+ +A+ ++
Sbjct: 337 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 396
Query: 442 KEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNA 501
M+ +EV Y +L++GLCKN + A + +M G+ + + Y+ MI G C
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 456
Query: 502 QLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFI 561
+D+ + L N+M + + PD+ TY+ L+N F + A +++ + G P+ I
Sbjct: 457 GFLDEAVVLLNEM--SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 514
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/563 (23%), Positives = 243/563 (43%), Gaps = 46/563 (8%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
+F L+ L + A EE ++ M + + +F + YG + KA ++F
Sbjct: 549 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE 608
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQP---NGLTFNLVIKAL 183
M H T ++ S+L + + GH A +F KSL+ P + + +N ++ A+
Sbjct: 609 MTKVGH-HPTFFTYGSLLKGLCKGGHLREAEKFL----KSLHAVPAAVDTVMYNTLLTAM 663
Query: 184 CKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG-TFPN 242
CK G + +AV +F + R+ PDSYTY++L+ GLC++G+ A+ E + G PN
Sbjct: 664 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 723
Query: 243 PFVFNVLISALCKKG-------------------DLIRAAKLVDNMSLKGCV-------- 275
++ + + K G D++ ++D S G +
Sbjct: 724 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 783
Query: 276 --------PNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQG 327
PN TYN L+ G ++ ++ + L ++ N +P+ +T +LV G +
Sbjct: 784 EMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 843
Query: 328 RASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYS 387
G +L + RG + Y ++ LIS G+ A L K M G +
Sbjct: 844 MLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCD 903
Query: 388 ALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNN 447
A++ L R + E+R L EM +G P S Y L+ G GD A +V +EM +
Sbjct: 904 AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 963
Query: 448 SCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQG 507
V S ++ L K GK EA ++ + ML + + ++++++H C V +
Sbjct: 964 KICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA 1023
Query: 508 MKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
++L +++ L+ D+ +YN+L+ + +++ A ++ M G + T +
Sbjct: 1024 LEL--RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1081
Query: 568 KTLRDNMNPPQDGREFLDELVVR 590
+ L L +L+ R
Sbjct: 1082 RGLLARETAFSGADIILKDLLAR 1104
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 145/320 (45%), Gaps = 7/320 (2%)
Query: 168 NIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEA 227
N PN T+N+++ K V + ++R I L PD T +L+ G+C+ ++
Sbjct: 789 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 848
Query: 228 VSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDG 287
+ +L G + + FN+LIS C G++ A LV M+ G ++ T + +V
Sbjct: 849 LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 908
Query: 288 LCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER-GHR- 345
L R + ++ +L++M P + L++G + G D + + EE H+
Sbjct: 909 LNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG---DIKTAFVVKEEMIAHKI 965
Query: 346 -GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE 404
S+++ L K GK + A L + M++ P ++ L+ C+ G EA E
Sbjct: 966 CPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALE 1025
Query: 405 YLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILING-L 463
+ M N G + +Y+ L+ G GD A +++EMK + N Y LI G L
Sbjct: 1026 LRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1085
Query: 464 CKNGKLMEAMMVWKQMLSRG 483
+ A ++ K +L+RG
Sbjct: 1086 ARETAFSGADIILKDLLARG 1105
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 149/529 (28%), Positives = 249/529 (47%), Gaps = 70/529 (13%)
Query: 72 LIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEF 131
LI+ L E+L +M R + + + Y KA PEK+ + RM+A+
Sbjct: 220 LIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKAD- 278
Query: 132 HCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLV------------ 179
H + ++ +FN++L + + G A + K L P+ TF+++
Sbjct: 279 HIEPSLITFNTLLKGLFKAGMVEDAENVLKEM-KDLGFVPDAFTFSILFDGYSSNEKAEA 337
Query: 180 -----------------------IKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMD 216
+ ALCK G +++A E+ + P+ Y+T++D
Sbjct: 338 ALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMID 397
Query: 217 GLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVP 276
G C++G + A ++ M+ +G P+ +N LI C+ G++ A K V+ M LKG P
Sbjct: 398 GYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSP 457
Query: 277 NEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVL 336
+ TYN L+ G RK + +K +L +M N +PN V++GTL++ K + + V
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 337 ISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCRE 396
+E+RG IY+ LI G +GK E A + KEM++KG E N V Y+ LIDGL
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 397 GKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCY 456
GK EA + L+E+ KG P+ FTY+SL+ G+ AG+ + I +++EMK + Y
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY 637
Query: 457 SILI---------------------------NGLCK----NGKLMEAMMVWKQMLSRGIK 485
+LI NG+ +G + +A + KQM+ + I
Sbjct: 638 HLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIG 697
Query: 486 LDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNA 534
LD Y+S+I G + + L ++M + E++P+ TYNI++
Sbjct: 698 LDKTTYNSLILGQLKVGKLCEVRSLIDEMNAR--EMEPEADTYNIIVKG 744
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 144/520 (27%), Positives = 243/520 (46%), Gaps = 40/520 (7%)
Query: 79 SSDFASLEELLQQMKRERRVFIEK-NFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTV 137
S+ FAS +EL +++++ ++ +A +LF + E +
Sbjct: 86 STPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNE-GIYPSS 144
Query: 138 KSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFR 197
S +L+ +++ F + + ++ +S + +P+ + I+A K+ V + +E+F
Sbjct: 145 DSLTLLLDHLVKTKQFRVTINVFLNILES-DFRPSKFMYGKAIQAAVKLSDVGKGLELFN 203
Query: 198 GIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKG 257
+ P + Y+ L+DGLCK R+++A L DEM P+ +N LI CK G
Sbjct: 204 RMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAG 263
Query: 258 DLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFG 317
+ ++ K+ + M P+ +T+NTL+ GL + G + A ++L +M VP+ TF
Sbjct: 264 NPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFS 323
Query: 318 TLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEK 377
L G+ +A V + + G + N Y S L++ L KEGK E A ++ M K
Sbjct: 324 ILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383
Query: 378 GCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKA 437
G PN V+Y+ +IDG CR+G AR + M+ +G P+ Y+ L+R F E G+ A
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443
Query: 438 --------------------IL---------------VWKEMKNNSCNHNEVCYSILING 462
IL + KEM++N N V Y LIN
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC 503
Query: 463 LCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQ 522
LCK KL+EA +V + M RG+ V Y+ +I G C+ ++ + +ML + EL
Sbjct: 504 LCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL- 562
Query: 523 PDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
++ TYN L++ +S A D+L + +G PD T
Sbjct: 563 -NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFT 601
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 156/595 (26%), Positives = 275/595 (46%), Gaps = 60/595 (10%)
Query: 80 SDFASLEELLQQMKRER---RVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQT 136
SD EL +MK +R VFI + V+ K A LF M A +
Sbjct: 193 SDVGKGLELFNRMKHDRIYPSVFI---YNVLIDGLCKGKRMNDAEQLFDEMLAR-RLLPS 248
Query: 137 VKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVF 196
+ ++N++++ + G+ ++ + + K+ +I+P+ +TFN ++K L K G+V+ A V
Sbjct: 249 LITYNTLIDGYCKAGNPEKSFKVRERM-KADHIEPSLITFNTLLKGLFKAGMVEDAENVL 307
Query: 197 RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
+ + PD++T+S L DG + + A+ + + G N + ++L++ALCK+
Sbjct: 308 KEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKE 367
Query: 257 GDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTF 316
G + +A +++ KG VPNEV YNT++DG CRKG L A + M P+ + +
Sbjct: 368 GKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAY 427
Query: 317 GTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMME 376
L+ F + G + + ++ +G + Y+ LI G ++ +F+ + KEM +
Sbjct: 428 NCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED 487
Query: 377 KGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHK 436
G PN V Y LI+ LC+ K EA+ +M+++G P Y+ L+ G G
Sbjct: 488 NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIED 547
Query: 437 AILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIH 496
A KEM N V Y+ LI+GL GKL EA + ++ +G+K DV Y+S+I
Sbjct: 548 AFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLIS 607
Query: 497 GFCNAQLVDQGMKLFNQM-----------------LCQ------------EAELQPDVAT 527
G+ A V + + L+ +M LC E L+PD+
Sbjct: 608 GYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLV 667
Query: 528 YNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDEL 587
YN +L+ + ++ +A ++ M+++ D T + L
Sbjct: 668 YNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTT---------------------YNSL 706
Query: 588 VVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAISECWSR 642
++ +K + +I+ M R + PEA T+ I+V+ C+ ++ A W R
Sbjct: 707 ILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAY--VWYR 759
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/506 (24%), Positives = 222/506 (43%), Gaps = 41/506 (8%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
++F +L++ L + E +L++MK V F ++F Y E A+ ++
Sbjct: 285 ITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYE- 343
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYS-HVCKSL------------------ 167
+ K + + +LN + +EG +A E + K L
Sbjct: 344 TAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKG 403
Query: 168 ---------------NIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYS 212
++P+ L +N +I+ C++G ++ A + + L+ +P TY+
Sbjct: 404 DLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYN 463
Query: 213 TLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLK 272
L+ G ++ D+ +L EM+ GT PN + LI+ LCK L+ A + +M +
Sbjct: 464 ILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDR 523
Query: 273 GCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDG 332
G P YN L+DG C KGK+ A +M+ N VT+ TL+ G G+ S+
Sbjct: 524 GVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEA 583
Query: 333 ASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDG 392
+L+ + +G + + + Y+SLISG G + + L++EM G +P Y LI
Sbjct: 584 EDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-S 642
Query: 393 LCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHN 452
LC + + EM K P+ Y+ ++ + GD KA + K+M S +
Sbjct: 643 LCTKEGIELTERLFGEMSLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLD 699
Query: 453 EVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFN 512
+ Y+ LI G K GKL E + +M +R ++ + Y+ ++ G C + +
Sbjct: 700 KTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYR 759
Query: 513 QMLCQEAELQPDVATYNILLNAFYQQ 538
+M QE DV N L++ ++
Sbjct: 760 EM--QEKGFLLDVCIGNELVSGLKEE 783
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 176/397 (44%), Gaps = 46/397 (11%)
Query: 126 RMEAEFHCKQTVK----SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIK 181
RM+ E KQ +K ++N ++ + G A E + K + P+ T+N++I
Sbjct: 409 RMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA-EKEVNKMKLKGVSPSVETYNILIG 467
Query: 182 ALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFP 241
+ D+ ++ + + P+ +Y TL++ LCK ++ EA + +M+ G P
Sbjct: 468 GYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP 527
Query: 242 NPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLL 301
++N+LI C KG + A + M KG N VTYNTL+DGL GKL++A LL
Sbjct: 528 KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLL 587
Query: 302 NQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKE 361
++ P+ T+ +L+ G+ G ++ ++ G + Y LIS KE
Sbjct: 588 LEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKE 647
Query: 362 G-------------------------------KFEHAMQLWKEMMEKGCEPNTVVYSALI 390
G E A L K+M+EK + Y++LI
Sbjct: 648 GIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLI 707
Query: 391 DGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKN---- 446
G + GK E R + EM + P + TY+ +++G E D A + ++EM+
Sbjct: 708 LGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFL 767
Query: 447 -NSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSR 482
+ C NE L++GL + + EA +V +M R
Sbjct: 768 LDVCIGNE-----LVSGLKEEWRSKEAEIVISEMNGR 799
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 125/283 (44%), Gaps = 24/283 (8%)
Query: 354 LISGLFKEGK-FEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK 412
L+S L E K A L+ + +G P++ + L+D L + + + +
Sbjct: 114 LLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILES 173
Query: 413 GHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEA 472
P+ F Y ++ + D K + ++ MK++ + Y++LI+GLCK ++ +A
Sbjct: 174 DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDA 233
Query: 473 MMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILL 532
++ +ML+R + ++ Y+++I G+C A ++ K+ +M + ++P + T+N LL
Sbjct: 234 EQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERM--KADHIEPSLITFNTLL 291
Query: 533 NAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLV 592
++ + A +VL M D G PD T I N
Sbjct: 292 KGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN------------------- 332
Query: 593 KRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKA 635
++ A + E +D + A T +I++ LCK I KA
Sbjct: 333 --EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA 373
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 125/252 (49%), Gaps = 14/252 (5%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRE---RRVFIEKNFIVIFKAYGKAHFPEKAVNL 123
+++ +LI+ L+ + + E+LL ++ R+ VF + I YG A ++ + L
Sbjct: 565 VTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI---SGYGFAGNVQRCIAL 621
Query: 124 FHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKAL 183
+ M+ K T+K+++ ++++ +EG +E + ++++P+ L +N V+
Sbjct: 622 YEEMKRS-GIKPTLKTYHLLISLCTKEG-----IELTERLFGEMSLKPDLLVYNGVLHCY 675
Query: 184 CKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNP 243
G +++A + + + ++ D TY++L+ G K G++ E SL+DEM P
Sbjct: 676 AVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEA 735
Query: 244 FVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQ 303
+N+++ C+ D + A M KG + + N LV GL + + +A ++++
Sbjct: 736 DTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISE 795
Query: 304 MVANKCVPNDVT 315
M N + DVT
Sbjct: 796 M--NGRMLGDVT 805
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 148/551 (26%), Positives = 260/551 (47%), Gaps = 44/551 (7%)
Query: 50 EIFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFK 109
+ F +W Y+ + +YS++E L+ + +L MKR + F +
Sbjct: 192 KFFYWADRQW-RYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMV 250
Query: 110 AYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNI 169
+Y +A A+ + M+ + + N+ ++V ++ +AL F + + + I
Sbjct: 251 SYSRAGQLRDALKVLTLMQ-RAGVEPNLLICNTTIDVFVRANRLEKALRFLERM-QVVGI 308
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVS 229
PN +T+N +I+ C + V++A+E+ +H + C PD +Y T+M LCKE RI E
Sbjct: 309 VPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRD 368
Query: 230 LLDEMQIE-GTFPNPFVFNVLI-----------------------------------SAL 253
L+ +M E G P+ +N LI AL
Sbjct: 369 LMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHAL 428
Query: 254 CKKGDLIRAAKLVDNMSLKG-CVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPN 312
CK+G + A L++ M KG C P+ VTY +V+G CR G+++KA LL M + PN
Sbjct: 429 CKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPN 488
Query: 313 DVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWK 372
V++ L++G + G++ + ++ EE N YS ++ GL +EGK A + +
Sbjct: 489 TVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVR 548
Query: 373 EMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAG 432
EM+ KG P V + L+ LCR+G+ EAR+++ E NKG N +++++ GF +
Sbjct: 549 EMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQND 608
Query: 433 DCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYS 492
+ A+ V +M + + + Y+ L++ L K G++ EA + K+ML +GI V Y
Sbjct: 609 ELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYR 668
Query: 493 SMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIML 552
++IH +C VD + + +M+ + Q YN ++ + A +L +L
Sbjct: 669 TVIHRYCQMGKVDDLVAILEKMISR----QKCRTIYNQVIEKLCVLGKLEEADTLLGKVL 724
Query: 553 DQGCDPDFITC 563
D TC
Sbjct: 725 RTASRSDAKTC 735
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/483 (26%), Positives = 219/483 (45%), Gaps = 82/483 (16%)
Query: 156 ALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLM 215
AL+F+ + + + + + +++ L K L + V + R +S +M
Sbjct: 190 ALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVM 249
Query: 216 DGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCV 275
+ G++ +A+ +L MQ G PN + N I + L +A + ++ M + G V
Sbjct: 250 VSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIV 309
Query: 276 PNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC-------------------------- 309
PN VTYN ++ G C ++ +A+ LL M + C
Sbjct: 310 PNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDL 369
Query: 310 ----------VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
VP+ VT+ TL+H K A + L +E+G R ++ YS+++ L
Sbjct: 370 MKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALC 429
Query: 360 KEGKFEHAMQLWKEMMEKG-CEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNS 418
KEG+ A L EM+ KG C P+ V Y+A+++G CR G+ D+A++ L M GH PN+
Sbjct: 430 KEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNT 489
Query: 419 FTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNH----NEVCYSILINGLCKNGKLMEAMM 474
+Y++L+ G G +A +EM N S H N + YS++++GL + GKL EA
Sbjct: 490 VSYTALLNGMCRTGKSLEA----REMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACD 545
Query: 475 VWKQM-----------------------------------LSRGIKLDVVAYSSMIHGFC 499
V ++M L++G ++VV ++++IHGFC
Sbjct: 546 VVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFC 605
Query: 500 NAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
+D + + + M DV TY L++ ++ I+ A +++ ML +G DP
Sbjct: 606 QNDELDAALSVLDDMYLINK--HADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPT 663
Query: 560 FIT 562
+T
Sbjct: 664 PVT 666
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 219/459 (47%), Gaps = 7/459 (1%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEK-NFIVIFKAYGKAHFPEKAVNLFH 125
+S+Y+++ L + +L+++M +E + ++ + + K ++A+ F
Sbjct: 348 VSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEAL-WFL 406
Query: 126 RMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCK 185
+ E + ++++++ + +EG A + + + + P+ +T+ V+ C+
Sbjct: 407 KDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCR 466
Query: 186 VGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFV 245
+G VD+A ++ + +H P++ +Y+ L++G+C+ G+ EA +++ + PN
Sbjct: 467 LGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSIT 526
Query: 246 FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
++V++ L ++G L A +V M LKG P V N L+ LCR G+ ++A + + +
Sbjct: 527 YSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECL 586
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE 365
C N V F T++HGF + SVL + + + Y++L+ L K+G+
Sbjct: 587 NKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIA 646
Query: 366 HAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
A +L K+M+ KG +P V Y +I C+ GK D+ L +M ++ Y+ ++
Sbjct: 647 EATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRT--IYNQVI 704
Query: 426 RGFFEAGDCHKA-ILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGI 484
G +A L+ K ++ S + + CY+ L+ G K G + A V +M +R +
Sbjct: 705 EKLCVLGKLEEADTLLGKVLRTASRSDAKTCYA-LMEGYLKKGVPLSAYKVACRMFNRNL 763
Query: 485 KLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQP 523
DV + VD+ KL + L + + P
Sbjct: 764 IPDVKMCEKLSKRLVLKGKVDEADKLMLR-LVERGHISP 801
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/396 (32%), Positives = 210/396 (53%), Gaps = 23/396 (5%)
Query: 169 IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCK---EGRID 225
IQPN TFN+VI ALCK G +++A +V + + C+P+ +Y+TL+DG CK G++
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
+A ++L EM PN FN+LI K +L + K+ M + PN ++YN+L+
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 286 DGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR 345
+GLC GK+++A+S+ ++MV+ PN +T+ L++GF K + + S++ +G
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 346 GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREY 405
+Y+ LI K GK + L +EM +G P+ Y+ LI GLCR G + A++
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 406 LIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCK 465
++ +KG LP+ T+ LM G+ G+ KA ++ KEM + Y+I++ G CK
Sbjct: 459 FDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK 517
Query: 466 NGKLMEAMMVWKQM-LSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPD 524
G L A + QM R ++++V +Y+ ++ G+ ++ L N+ML E L P+
Sbjct: 518 EGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML--EKGLVPN 575
Query: 525 VATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDF 560
TY I V M+DQG PD
Sbjct: 576 RITYEI----------------VKEEMVDQGFVPDI 595
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/468 (27%), Positives = 222/468 (47%), Gaps = 38/468 (8%)
Query: 142 SVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHL 201
S L+ ++ G H+ + + N+ N + ++++ A + E F+
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGY 181
Query: 202 RNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIR 261
+ + LM L KE R + + EM PN F FNV+I+ALCK G + +
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 262 AAKLVDNMSLKGCVPNEVTYNTLVDGLCR---KGKLNKAVSLLNQMVANKCVPNDVTFGT 318
A ++++M + GC PN V+YNTL+DG C+ GK+ KA ++L +MV N PN TF
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301
Query: 319 LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG 378
L+ GF K V + ++ + N Y+SLI+GL GK A+ + +M+ G
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 379 CEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAI 438
+PN + Y+ALI+G C+ EA + +K +G +P + Y+ L+ + + G
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGF 421
Query: 439 LVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGF 498
+ +EM+ + Y+ LI GLC+NG + A ++ Q+ S+G+ D+V + ++ G+
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGY 480
Query: 499 CNAQLVDQGMKLFNQM------------------LCQEAELQP----------------D 524
C + L +M C+E L+ +
Sbjct: 481 CRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMN 540
Query: 525 VATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRD 572
VA+YN+LL + Q+ + A +LN ML++G P+ IT +I + + D
Sbjct: 541 VASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVD 588
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 222/465 (47%), Gaps = 55/465 (11%)
Query: 50 EIFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKN---FIV 106
E FK + +G YKL LS L+ L + A +E + ++M R + I+ N F V
Sbjct: 174 EAFKRSGY-YG-YKLSALSCKPLMIALLKENRSADVEYVYKEMIRRK---IQPNVFTFNV 228
Query: 107 IFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQ---EGHFHRALEFYSHV 163
+ A K KA ++ M+ + C V S+N++++ + G ++A +
Sbjct: 229 VINALCKTGKMNKARDVMEDMKV-YGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEM 287
Query: 164 CKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGR 223
++ ++ PN TFN++I K + +++VF+ + ++ P+ +Y++L++GLC G+
Sbjct: 288 VEN-DVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGK 346
Query: 224 IDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNT 283
I EA+S+ D+M G PN +N LI+ CK L A + ++ +G VP YN
Sbjct: 347 ISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNM 406
Query: 284 LVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERG 343
L+D C+ GK++ +L +M VP+ T+ L+
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI----------------------- 443
Query: 344 HRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAR 403
+GL + G E A +L+ ++ KG P+ V + L++G CR+G++ +A
Sbjct: 444 ------------AGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAA 490
Query: 404 EYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEM-KNNSCNHNEVCYSILING 462
L EM G P TY+ +M+G+ + G+ A + +M K N Y++L+ G
Sbjct: 491 MLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550
Query: 463 LCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQG 507
+ GKL +A M+ +ML +G+ + + Y ++VDQG
Sbjct: 551 YSQKGKLEDANMLLNEMLEKGLVPNRITYE-----IVKEEMVDQG 590
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 180/350 (51%), Gaps = 7/350 (2%)
Query: 67 LSFYSLIE---KLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNL 123
+S+ +LI+ KL + + +L++M F ++ + K ++ +
Sbjct: 259 VSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKV 318
Query: 124 FHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKAL 183
F M + K V S+NS++N + G A+ + S +QPN +T+N +I
Sbjct: 319 FKEMLDQ-DVKPNVISYNSLINGLCNGGKISEAISMRDKMV-SAGVQPNLITYNALINGF 376
Query: 184 CKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNP 243
CK ++ +A+++F + + P + Y+ L+D CK G+ID+ +L +EM+ EG P+
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 244 FVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQ 303
+N LI+ LC+ G++ A KL D ++ KG +P+ VT++ L++G CRKG+ KA LL +
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 304 MVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLE-ERGHRGNEYIYSSLISGLFKEG 362
M P +T+ ++ G+ K+G ++ +E ER R N Y+ L+ G ++G
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555
Query: 363 KFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK 412
K E A L EM+EKG PN + Y + + + +G + +L + K
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVSTK 605
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 183/372 (49%), Gaps = 23/372 (6%)
Query: 283 TLVDGLCRKGKLNKAVSLLN--QMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLE 340
+ +DG R G ++ S+ + M N CV N + LV + R G
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDNVCV-NSIIADMLVLAYANNSRFELGFEAFKRSG 180
Query: 341 ERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
G++ + L+ L KE + ++KEM+ + +PN ++ +I+ LC+ GK +
Sbjct: 181 YYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMN 240
Query: 401 EAREYLIEMKNKGHLPNSFTYSSLMRGFFEA---GDCHKAILVWKEMKNNSCNHNEVCYS 457
+AR+ + +MK G PN +Y++L+ G+ + G +KA V KEM N + N ++
Sbjct: 241 KARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFN 300
Query: 458 ILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQ 517
ILI+G K+ L +M V+K+ML + +K +V++Y+S+I+G CN + + + + ++M+
Sbjct: 301 ILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMV-- 358
Query: 518 EAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPP 577
A +QP++ TYN L+N F + + + A+D+ + QG P ++ + +
Sbjct: 359 SAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC-KLGKI 417
Query: 578 QDGREFLDEL--------------VVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVV 623
DG +E+ ++ + R I A+K + L LP+ T+ I++
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILM 477
Query: 624 QQLCKPRNIRKA 635
+ C+ RKA
Sbjct: 478 EGYCRKGESRKA 489
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 102/247 (41%), Gaps = 29/247 (11%)
Query: 415 LPNSFTYS---SLMRGFFEAGDCHK--AILVWKEMKNNSCNHNEVCYSILINGLCKNGKL 469
L N+ YS S + GF G H+ +I M +N C N + +L+ N +
Sbjct: 111 LANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVC-VNSIIADMLVLAYANNSRF 169
Query: 470 MEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYN 529
+K+ G KL ++ ++ ++ +M+ ++QP+V T+N
Sbjct: 170 ELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMI--RRKIQPNVFTFN 227
Query: 530 ILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT-------------------CDIFLKTL 570
+++NA + +++A DV+ M GC P+ ++ D LK +
Sbjct: 228 VVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEM 287
Query: 571 RDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPR 630
+N P + L+ K G+ K+ + MLD+ + P ++ ++ LC
Sbjct: 288 VENDVSPN--LTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGG 345
Query: 631 NIRKAIS 637
I +AIS
Sbjct: 346 KISEAIS 352
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 133/446 (29%), Positives = 220/446 (49%), Gaps = 23/446 (5%)
Query: 104 FIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEG-HFHRALEFYSH 162
F V+ AY K EKAV F RM+ EF C+ V ++N +L V+++E F A Y+
Sbjct: 130 FCVLISAYAKMGMAEKAVESFGRMK-EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNE 188
Query: 163 VCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEG 222
+ K N PN TF +++ L K G A ++F + R +P+ TY+ L+ GLC+ G
Sbjct: 189 MLKC-NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRG 247
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
D+A L EMQ G +P+ N L+ CK G ++ A +L+ G V Y+
Sbjct: 248 SADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYS 307
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER 342
+L+DGL R + +A L M+ P+ + + L+ G K G+ D +L S+ +
Sbjct: 308 SLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSK 367
Query: 343 GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
G + Y Y+++I L G E L EM E P+ ++ LI +CR G EA
Sbjct: 368 GISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREA 427
Query: 403 REYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMK-----------NNSCNH 451
E E++ G P+ T+++L+ G ++G+ +A L+ +M+ ++S N
Sbjct: 428 EEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNR 487
Query: 452 NEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLF 511
+ + + ++G +++A G D+V+Y+ +I+GFC A +D +KL
Sbjct: 488 S-------FDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLL 540
Query: 512 NQMLCQEAELQPDVATYNILLNAFYQ 537
N + Q L PD TYN L+N ++
Sbjct: 541 NVL--QLKGLSPDSVTYNTLINGLHR 564
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 206/433 (47%), Gaps = 47/433 (10%)
Query: 137 VKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVF 196
++ ++S+++ + + + +A E Y+++ K NI+P+ + + ++I+ L K G ++ A+++
Sbjct: 303 LRGYSSLIDGLFRARRYTQAFELYANMLKK-NIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 197 RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
+ + +PD+Y Y+ ++ LC G ++E SL EM +FP+ +LI ++C+
Sbjct: 362 SSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRN 421
Query: 257 GDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTF 316
G + A ++ + GC P+ T+N L+DGLC+ G+L +A LL++M + P + F
Sbjct: 422 GLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGR--PASL-F 478
Query: 317 GTLVHG-------FVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
L H V+ G L + G + Y+ LI+G + G + A++
Sbjct: 479 LRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALK 538
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF 429
L + KG P++V Y+ LI+GL R G+ +EA + + H P Y SLM
Sbjct: 539 LLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPA--VYRSLMTWSC 596
Query: 430 EAGDCHKAILVW-KEMKNNSC------NHNEVC--------------------------- 455
A +W K +K SC N E C
Sbjct: 597 RKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGP 656
Query: 456 YSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
Y+I + GLC++G+ EA+MV+ + + I + + +IHG C + +D +++F L
Sbjct: 657 YTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTL 716
Query: 516 CQEAELQPDVATY 528
+L P V Y
Sbjct: 717 DNNFKLMPRVCNY 729
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 209/436 (47%), Gaps = 23/436 (5%)
Query: 62 YKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFI---VIFKAYGKAHFPE 118
+ LG + SLI+ L + + EL M ++ I+ + I ++ + KA E
Sbjct: 299 FVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKN---IKPDIILYTILIQGLSKAGKIE 355
Query: 119 KAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFH--RALEFYSHVCKSLNIQPNGLTF 176
A+ L M ++ T +N+V+ + G R+L+ +S P+ T
Sbjct: 356 DALKLLSSMPSKGISPDTY-CYNAVIKALCGRGLLEEGRSLQLEMSETESF---PDACTH 411
Query: 177 NLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQI 236
++I ++C+ GLV +A E+F I C+P T++ L+DGLCK G + EA LL +M++
Sbjct: 412 TILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEV 471
Query: 237 EGTFPNPFVF-----NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRK 291
G + F+ N + + G +++A + + + + G P+ V+YN L++G CR
Sbjct: 472 -GRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRA 530
Query: 292 GKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIY 351
G ++ A+ LLN + P+ VT+ TL++G + GR + + + ++ H + +Y
Sbjct: 531 GDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRH--SPAVY 588
Query: 352 SSLISGLFKEGKFEHAMQLWKEMMEK-GCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
SL++ ++ K A LW + ++K C + I+ +EG+ + A LIE+
Sbjct: 589 RSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANE--IEQCFKEGETERALRRLIELD 646
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
+ Y+ + G ++G H+A++V+ ++ LI+GLCK +L
Sbjct: 647 TRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLD 706
Query: 471 EAMMVWKQMLSRGIKL 486
A+ V+ L KL
Sbjct: 707 AAIEVFLYTLDNNFKL 722
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 134/505 (26%), Positives = 240/505 (47%), Gaps = 23/505 (4%)
Query: 133 CKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQA 192
C F+++ +V+I G A++ +S + K + P + N ++ K+G D
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKM-KRFRVFPKTRSCNGLLHRFAKLGKTDDV 246
Query: 193 VEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISA 252
F+ + P +TY+ ++D +CKEG ++ A L +EM+ G P+ +N +I
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 253 LCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPN 312
K G L + M C P+ +TYN L++ C+ GKL + +M N PN
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 313 DVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWK 372
V++ TLV F K+G + + G NEY Y+SLI K G A +L
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 373 EMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAG 432
EM++ G E N V Y+ALIDGLC + EA E +M G +PN +Y++L+ GF +A
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 433 DCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYS 492
+ +A+ + E+K + + Y I GLC K+ A +V +M GIK + + Y+
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546
Query: 493 SMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIML 552
+++ + + +G+ L ++M +E +++ V T+ +L++ + +S+A+D N
Sbjct: 547 TLMDAYFKSGNPTEGLHLLDEM--KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR-- 602
Query: 553 DQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCL 612
I+ D L Q ++ L K + A+ + E M+ + L
Sbjct: 603 --------ISNDFGL----------QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL 644
Query: 613 LPEASTWAIVVQQLCKPRNIRKAIS 637
+P+ + + ++ K N+ +A++
Sbjct: 645 VPDRTAYTSLMDGNFKQGNVLEALA 669
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 222/452 (49%), Gaps = 5/452 (1%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
E A LF M+ TV ++NS+++ + G + F+ + K + +P+ +T+N
Sbjct: 279 EAARGLFEEMKFRGLVPDTV-TYNSMIDGFGKVGRLDDTVCFFEEM-KDMCCEPDVITYN 336
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
+I CK G + +E +R + P+ +YSTL+D CKEG + +A+ +M+
Sbjct: 337 ALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV 396
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G PN + + LI A CK G+L A +L + M G N VTY L+DGLC ++ +A
Sbjct: 397 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 456
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
L +M +PN ++ L+HGFVK +L L+ RG + + +Y + I G
Sbjct: 457 EELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWG 516
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
L K E A + EM E G + N+++Y+ L+D + G E L EMK
Sbjct: 517 LCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVT 576
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNN-SCNHNEVCYSILINGLCKNGKLMEAMMVW 476
T+ L+ G + KA+ + + N+ N ++ +I+GLCK+ ++ A ++
Sbjct: 577 VVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLF 636
Query: 477 KQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFY 536
+QM+ +G+ D AY+S++ G V + + L ++M E ++ D+ Y L+
Sbjct: 637 EQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM--AEIGMKLDLLAYTSLVWGLS 694
Query: 537 QQNNISRAMDVLNIMLDQGCDPDFITCDIFLK 568
N + +A L M+ +G PD + C LK
Sbjct: 695 HCNQLQKARSFLEEMIGEGIHPDEVLCISVLK 726
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 219/480 (45%), Gaps = 38/480 (7%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
++ +I+ + D + L ++MK V + + +GK + V F
Sbjct: 263 FTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEE 322
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
M+ + C+ V ++N+++N + G LEFY + K ++PN ++++ ++ A CK
Sbjct: 323 MK-DMCCEPDVITYNALINCFCKFGKLPIGLEFYREM-KGNGLKPNVVSYSTLVDAFCKE 380
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
G++ QA++ + + P+ YTY++L+D CK G + +A L +EM G N +
Sbjct: 381 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 440
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA 306
LI LC + A +L M G +PN +YN L+ G + +++A+ LLN++
Sbjct: 441 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEH 366
P+ + +GT + G + V+ ++E G + N IY++L+ FK G
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Query: 367 AMQLWKEMMEK------------------------------------GCEPNTVVYSALI 390
+ L EM E G + N +++A+I
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 391 DGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCN 450
DGLC++ + + A +M KG +P+ Y+SLM G F+ G+ +A+ + +M
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 680
Query: 451 HNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKL 510
+ + Y+ L+ GL +L +A ++M+ GI D V S++ +D+ ++L
Sbjct: 681 LDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 156/399 (39%), Gaps = 87/399 (21%)
Query: 66 DLSFYSLIE---KLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVN 122
+ ++ SLI+ K+ SD L + Q+ E V + + A ++A
Sbjct: 402 EYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVV---TYTALIDGLCDAERMKEAEE 458
Query: 123 LFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKA 182
LF +M+ + S+N++++ ++ + RALE + + K I+P+ L + I
Sbjct: 459 LFGKMDTA-GVIPNLASYNALIHGFVKAKNMDRALELLNEL-KGRGIKPDLLLYGTFIWG 516
Query: 183 LCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQ------- 235
LC + ++ A V + +S Y+TLMD K G E + LLDEM+
Sbjct: 517 LCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVT 576
Query: 236 -------IEGTFPNPFV----------------------FNVLISALCKKGDLIRAAKLV 266
I+G N V F +I LCK + A L
Sbjct: 577 VVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLF 636
Query: 267 DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQ 326
+ M KG VP+ Y +L+DG ++G + +A++L ++M
Sbjct: 637 EQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMA--------------------- 675
Query: 327 GRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVY 386
E G + + Y+SL+ GL + + A +EM+ +G P+ V+
Sbjct: 676 --------------EIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLC 721
Query: 387 SALIDGLCREGKADEAREY--------LIEMKNKGHLPN 417
+++ G DEA E L+ N LPN
Sbjct: 722 ISVLKKHYELGCIDEAVELQSYLMKHQLLTSDNDNALPN 760
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 224/465 (48%), Gaps = 39/465 (8%)
Query: 141 NSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIH 200
N +L +++ F + E + VCK + P+ F I A CK G V++AV++F +
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCKG--VSPDVYLFTTAINAFCKGGKVEEAVKLFSKME 287
Query: 201 LRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLI 260
AP+ T++T++DGL GR DEA ++M G P +++L+ L + +
Sbjct: 288 EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIG 347
Query: 261 RAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLV 320
A ++ M+ KG PN + YN L+D G LNKA+ + + MV+ T+ TL+
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 321 HGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCE 380
G+ K G+A + +L + G N+ ++S+I L F+ A++ EM+ +
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 467
Query: 381 PNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILV 440
P + + LI GLC+ GK +A E + NKG + ++ T ++L+ G EAG +A +
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 441 WKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIK--------------- 485
KE+ C + V Y+ LI+G C KL EA M +M+ RG+K
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 486 --------------------LDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDV 525
DV YS MI G C A+ ++G + F++M+ + +QP+
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK--NVQPNT 645
Query: 526 ATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
YN L+ A+ + +S A+++ M +G P+ T +K +
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/533 (26%), Positives = 245/533 (45%), Gaps = 72/533 (13%)
Query: 104 FIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEF---- 159
F A+ K E+AV LF +ME E V +FN+V++ + G + A F
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKME-EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321
Query: 160 -----------YSHVCKSLN-------------------IQPNGLTFNLVIKALCKVGLV 189
YS + K L PN + +N +I + + G +
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 190 DQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQI------EGTF--- 240
++A+E+ + + + S TY+TL+ G CK G+ D A LL EM +G+F
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441
Query: 241 --------------------------PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGC 274
P + LIS LCK G +A +L KG
Sbjct: 442 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
Query: 275 VPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGAS 334
V + T N L+ GLC GKL++A + +++ CV + V++ TL+ G + + +
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 335 VLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLC 394
L + +RG + + Y YS LI GLF K E A+Q W + G P+ YS +IDG C
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 395 REGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEV 454
+ + +E +E+ EM +K PN+ Y+ L+R + +G A+ + ++MK+ + N
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 455 CYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
Y+ LI G+ ++ EA +++++M G++ +V Y+++I G+ + + L +M
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 515 LCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
+ P+ TY +++ + + N++ A +LN M ++G PD IT F+
Sbjct: 742 --HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 203/409 (49%), Gaps = 3/409 (0%)
Query: 136 TVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEV 195
T ++N+++ + G A + S+ N +F VI LC + D A+
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEML-SIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 196 FRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCK 255
+ LRN +P +TL+ GLCK G+ +A+ L + +G + N L+ LC+
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 517
Query: 256 KGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVT 315
G L A ++ + +GCV + V+YNTL+ G C K KL++A L++MV P++ T
Sbjct: 518 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 577
Query: 316 FGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM 375
+ L+ G + + + G + Y YS +I G K + E + + EMM
Sbjct: 578 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 637
Query: 376 EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCH 435
K +PNTVVY+ LI CR G+ A E +MK+KG PNS TY+SL++G
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 436 KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
+A L+++EM+ N Y+ LI+G K G++++ + ++M S+ + + + Y+ MI
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 496 HGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRA 544
G+ V + +L N+M +E + PD TY + + +Q + A
Sbjct: 758 GGYARDGNVTEASRLLNEM--REKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 200/436 (45%), Gaps = 47/436 (10%)
Query: 214 LMDGLCKEGRIDEAVSLLDEMQI---EGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMS 270
L++ C + + D LD + +G FP+ N+L+++L + + + + D +
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VV 252
Query: 271 LKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRAS 330
KG P+ + T ++ C+ GK+ +AV L ++M PN VTF T++ G GR
Sbjct: 253 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 331 DGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALI 390
+ + ERG YS L+ GL + + A + KEM +KG PN +VY+ LI
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 372
Query: 391 DGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCN 450
D G ++A E M +KG S TY++L++G+ + G A + KEM + N
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 451 HNEVCY-----------------------------------SILINGLCKNGKLMEAMMV 475
N+ + + LI+GLCK+GK +A+ +
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Query: 476 WKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAF 535
W Q L++G +D ++++HG C A +D+ ++ ++L + + D +YN L++
Sbjct: 493 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM--DRVSYNTLISGC 550
Query: 536 YQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQ 595
+ + A L+ M+ +G PD T I + L NMN ++ +F D+ KR
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF-NMNKVEEAIQFWDD-----CKRN 604
Query: 596 RTIGASKIIEVMLDRC 611
+ VM+D C
Sbjct: 605 GMLPDVYTYSVMIDGC 620
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 131/296 (44%), Gaps = 18/296 (6%)
Query: 359 FKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNS 418
FK A+ ++ + KG P+ + L+ L R + + E ++ KG P+
Sbjct: 202 FKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDV 260
Query: 419 FTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQ 478
+ +++ + F + G +A+ ++ +M+ N V ++ +I+GL G+ EA M ++
Sbjct: 261 YLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 320
Query: 479 MLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQ 538
M+ RG++ ++ YS ++ G A+ + + +M + P+V YN L+++F +
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM--TKKGFPPNVIVYNNLIDSFIEA 378
Query: 539 NNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTI 598
++++A+++ ++M+ +G T + +K N R + L + Q +
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 599 --------------GASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAISECW 640
A + + ML R + P ++ LCK KA+ E W
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL-ELW 493
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%)
Query: 169 IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAV 228
++PN + +I K+G + + + R +H +N P+ TY+ ++ G ++G + EA
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 229 SLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVD 267
LL+EM+ +G P+ + I K+G ++ A K D
Sbjct: 771 RLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSD 809
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 224/465 (48%), Gaps = 39/465 (8%)
Query: 141 NSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIH 200
N +L +++ F + E + VCK + P+ F I A CK G V++AV++F +
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCKG--VSPDVYLFTTAINAFCKGGKVEEAVKLFSKME 287
Query: 201 LRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLI 260
AP+ T++T++DGL GR DEA ++M G P +++L+ L + +
Sbjct: 288 EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIG 347
Query: 261 RAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLV 320
A ++ M+ KG PN + YN L+D G LNKA+ + + MV+ T+ TL+
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 321 HGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCE 380
G+ K G+A + +L + G N+ ++S+I L F+ A++ EM+ +
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 467
Query: 381 PNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILV 440
P + + LI GLC+ GK +A E + NKG + ++ T ++L+ G EAG +A +
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 441 WKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIK--------------- 485
KE+ C + V Y+ LI+G C KL EA M +M+ RG+K
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 486 --------------------LDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDV 525
DV YS MI G C A+ ++G + F++M+ + +QP+
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK--NVQPNT 645
Query: 526 ATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
YN L+ A+ + +S A+++ M +G P+ T +K +
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/533 (26%), Positives = 245/533 (45%), Gaps = 72/533 (13%)
Query: 104 FIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEF---- 159
F A+ K E+AV LF +ME E V +FN+V++ + G + A F
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKME-EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321
Query: 160 -----------YSHVCKSLN-------------------IQPNGLTFNLVIKALCKVGLV 189
YS + K L PN + +N +I + + G +
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 190 DQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQI------EGTF--- 240
++A+E+ + + + S TY+TL+ G CK G+ D A LL EM +G+F
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441
Query: 241 --------------------------PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGC 274
P + LIS LCK G +A +L KG
Sbjct: 442 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
Query: 275 VPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGAS 334
V + T N L+ GLC GKL++A + +++ CV + V++ TL+ G + + +
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 335 VLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLC 394
L + +RG + + Y YS LI GLF K E A+Q W + G P+ YS +IDG C
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 395 REGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEV 454
+ + +E +E+ EM +K PN+ Y+ L+R + +G A+ + ++MK+ + N
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 455 CYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
Y+ LI G+ ++ EA +++++M G++ +V Y+++I G+ + + L +M
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 515 LCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
+ P+ TY +++ + + N++ A +LN M ++G PD IT F+
Sbjct: 742 --HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 203/409 (49%), Gaps = 3/409 (0%)
Query: 136 TVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEV 195
T ++N+++ + G A + S+ N +F VI LC + D A+
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEML-SIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 196 FRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCK 255
+ LRN +P +TL+ GLCK G+ +A+ L + +G + N L+ LC+
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 517
Query: 256 KGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVT 315
G L A ++ + +GCV + V+YNTL+ G C K KL++A L++MV P++ T
Sbjct: 518 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 577
Query: 316 FGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM 375
+ L+ G + + + G + Y YS +I G K + E + + EMM
Sbjct: 578 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 637
Query: 376 EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCH 435
K +PNTVVY+ LI CR G+ A E +MK+KG PNS TY+SL++G
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 436 KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
+A L+++EM+ N Y+ LI+G K G++++ + ++M S+ + + + Y+ MI
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 496 HGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRA 544
G+ V + +L N+M +E + PD TY + + +Q + A
Sbjct: 758 GGYARDGNVTEASRLLNEM--REKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 200/436 (45%), Gaps = 47/436 (10%)
Query: 214 LMDGLCKEGRIDEAVSLLDEMQI---EGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMS 270
L++ C + + D LD + +G FP+ N+L+++L + + + + D +
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VV 252
Query: 271 LKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRAS 330
KG P+ + T ++ C+ GK+ +AV L ++M PN VTF T++ G GR
Sbjct: 253 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 331 DGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALI 390
+ + ERG YS L+ GL + + A + KEM +KG PN +VY+ LI
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 372
Query: 391 DGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCN 450
D G ++A E M +KG S TY++L++G+ + G A + KEM + N
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 451 HNEVCY-----------------------------------SILINGLCKNGKLMEAMMV 475
N+ + + LI+GLCK+GK +A+ +
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Query: 476 WKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAF 535
W Q L++G +D ++++HG C A +D+ ++ ++L + + D +YN L++
Sbjct: 493 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM--DRVSYNTLISGC 550
Query: 536 YQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQ 595
+ + A L+ M+ +G PD T I + L NMN ++ +F D+ KR
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF-NMNKVEEAIQFWDD-----CKRN 604
Query: 596 RTIGASKIIEVMLDRC 611
+ VM+D C
Sbjct: 605 GMLPDVYTYSVMIDGC 620
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 131/296 (44%), Gaps = 18/296 (6%)
Query: 359 FKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNS 418
FK A+ ++ + KG P+ + L+ L R + + E ++ KG P+
Sbjct: 202 FKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDV 260
Query: 419 FTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQ 478
+ +++ + F + G +A+ ++ +M+ N V ++ +I+GL G+ EA M ++
Sbjct: 261 YLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 320
Query: 479 MLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQ 538
M+ RG++ ++ YS ++ G A+ + + +M + P+V YN L+++F +
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM--TKKGFPPNVIVYNNLIDSFIEA 378
Query: 539 NNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTI 598
++++A+++ ++M+ +G T + +K N R + L + Q +
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 599 --------------GASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAISECW 640
A + + ML R + P ++ LCK KA+ E W
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL-ELW 493
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%)
Query: 169 IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAV 228
++PN + +I K+G + + + R +H +N P+ TY+ ++ G ++G + EA
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 229 SLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVD 267
LL+EM+ +G P+ + I K+G ++ A K D
Sbjct: 771 RLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSD 809
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 260/517 (50%), Gaps = 20/517 (3%)
Query: 137 VKSFNSVLNVIIQEGHF--HRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVE 194
+ N + + I+ ++ H E Y + S P+ +TF+ +I LCK G V +
Sbjct: 222 ISELNLITHTILLSSYYNLHAIEEAYRDMVMS-GFDPDVVTFSSIINRLCKGGKVLEGGL 280
Query: 195 VFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALC 254
+ R + + P+ TY+TL+D L K A++L +M + G + V+ VL+ L
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 255 KKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDV 314
K GDL A K + VPN VTY LVDGLC+ G L+ A ++ QM+ +PN V
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 315 TFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEM 374
T+ ++++G+VK+G + S+L +E++ N + Y ++I GLFK GK E A++L KEM
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Query: 375 MEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDC 434
G E N + AL++ L R G+ E + + +M +KG + Y+SL+ FF+ GD
Sbjct: 461 RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDE 520
Query: 435 HKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSM 494
A+ +EM+ + V Y++LI+G+ K GK+ A +K M +GI+ D+ ++ M
Sbjct: 521 EAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIM 579
Query: 495 IHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQ 554
++ + +KL+++M + ++P + + NI++ + + A+ +LN M+
Sbjct: 580 MNSQRKQGDSEGILKLWDKM--KSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLM 637
Query: 555 GCDPDFITCDIFLKTLRDNMNPP--------------QDGREFLDELVVRLVKRQRTIGA 600
P+ T IFL T + + R+ + L+ L K T A
Sbjct: 638 EIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKA 697
Query: 601 SKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAIS 637
+ ++ M R +P+ T+ ++ ++RKA+S
Sbjct: 698 AMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALS 734
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/529 (25%), Positives = 241/529 (45%), Gaps = 98/529 (18%)
Query: 140 FNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGI 199
+NS+++ G H + + + P+ N++I + CKVG + A+ + R
Sbjct: 96 WNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRN- 154
Query: 200 HLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDL 259
R + D+ TY+T++ GLC+ G DEA L EM G P+ +N LI CK G+
Sbjct: 155 --RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNF 212
Query: 260 IRAAKLVD----------------------------NMSLKGCVPNEVTYNTLVDGLCRK 291
+RA LVD +M + G P+ VT++++++ LC+
Sbjct: 213 VRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKG 272
Query: 292 GKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIY 351
GK+ + LL +M PN VT+ TLV K ++ + RG + +Y
Sbjct: 273 GKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVY 332
Query: 352 SSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKN 411
+ L+ GLFK G A + +K ++E PN V Y+AL+DGLC+ G A + +M
Sbjct: 333 TVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLE 392
Query: 412 KGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGK--- 468
K +PN TYSS++ G+ + G +A+ + ++M++ + N Y +I+GL K GK
Sbjct: 393 KSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM 452
Query: 469 ------------------LMEAMM--------------VWKQMLSRGIKLDVVAYSSMIH 496
+++A++ + K M+S+G+ LD + Y+S+I
Sbjct: 453 AIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 512
Query: 497 GFCNA-----------QLVDQGMK--------LFNQML-------------CQEAELQPD 524
F ++ ++GM L + ML +E ++PD
Sbjct: 513 VFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPD 572
Query: 525 VATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDN 573
+AT+NI++N+ +Q + + + + M G P ++C+I + L +N
Sbjct: 573 IATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCEN 621
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 154/657 (23%), Positives = 287/657 (43%), Gaps = 120/657 (18%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFI---VIFKAYGKAHFPEKAVNL 123
+S+ +LI+ +F + L+ ++ E N I ++ +Y H E+A
Sbjct: 197 VSYNTLIDGFCKVGNFVRAKALVDEIS-------ELNLITHTILLSSYYNLHAIEEA--- 246
Query: 124 FHRMEAEFHCKQTVKSFNSVLN------VIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+R V +F+S++N +++ G R +E +++ PN +T+
Sbjct: 247 -YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREME-------EMSVYPNHVTYT 298
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
++ +L K + A+ ++ + +R D Y+ LMDGL K G + EA + +
Sbjct: 299 TLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLED 358
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
PN + L+ LCK GDL A ++ M K +PN VTY+++++G +KG L +A
Sbjct: 359 NQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEA 418
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER--GHRGNEYIYSSLI 355
VSLL +M VPN T+GT++ G K G+ + ++ +S E R G N YI +L+
Sbjct: 419 VSLLRKMEDQNVVPNGFTYGTVIDGLFKAGK--EEMAIELSKEMRLIGVEENNYILDALV 476
Query: 356 SGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALID------------------------ 391
+ L + G+ + L K+M+ KG + + Y++LID
Sbjct: 477 NHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMP 536
Query: 392 -----------GLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILV 440
G+ + GK Y M+ KG P+ T++ +M + GD + +
Sbjct: 537 WDVVSYNVLISGMLKFGKVGADWAYK-GMREKGIEPDIATFNIMMNSQRKQGDSEGILKL 595
Query: 441 WKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM--------------------- 479
W +MK+ + + +I++ LC+NGK+ EA+ + QM
Sbjct: 596 WDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSK 655
Query: 480 --------------LSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDV 525
LS GIKL Y+++I C + + + M + PD
Sbjct: 656 HKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDM--EARGFIPDT 713
Query: 526 ATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLD 585
T+N L++ ++ +++ +A+ ++M++ G P+ T + ++ L D ++ ++L
Sbjct: 714 VTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSD-AGLIKEVDKWLS 772
Query: 586 ELVVR-----------LVKRQRTIGASK----IIEVMLDRCLLPEASTWAIVVQQLC 627
E+ R L+ Q IG K I M+ L+P+ ST+ +++ +
Sbjct: 773 EMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFA 829
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 147/617 (23%), Positives = 263/617 (42%), Gaps = 66/617 (10%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
++F S+I +L LL++M+ + + + KA+ A+ L+ +
Sbjct: 260 VTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQ 319
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
M V + +++ + + G A + + + + N PN +T+ ++ LCK
Sbjct: 320 MVVRGIPVDLV-VYTVLMDGLFKAGDLREAEKTFKMLLED-NQVPNVVTYTALVDGLCKA 377
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
G + A + + ++ P+ TYS++++G K+G ++EAVSLL +M+ + PN F +
Sbjct: 378 GDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTY 437
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA 306
+I L K G A +L M L G N + LV+ L R G++ + L+ MV+
Sbjct: 438 GTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVS 497
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKF-- 364
+ + + +L+ F K G + ++ERG + Y+ LISG+ K GK
Sbjct: 498 KGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGA 557
Query: 365 --------------------------------EHAMQLWKEMMEKGCEPNTVVYSALIDG 392
E ++LW +M G +P+ + + ++
Sbjct: 558 DWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGM 617
Query: 393 LCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHK---AILVWKE-MKNNS 448
LC GK +EA L +M PN TY R F + HK AI E + +
Sbjct: 618 LCENGKMEEAIHILNQMMLMEIHPNLTTY----RIFLDTSSKHKRADAIFKTHETLLSYG 673
Query: 449 CNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGM 508
+ Y+ LI LCK G +A MV M +RG D V ++S++HG+ V + +
Sbjct: 674 IKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKAL 733
Query: 509 KLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCD---- 564
++ M+ EA + P+VATYN ++ I L+ M +G PD T +
Sbjct: 734 STYSVMM--EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALIS 791
Query: 565 -------------IFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRC 611
I+ + + D + P + L+ + + A ++++ M R
Sbjct: 792 GQAKIGNMKGSMTIYCEMIADGLVPKTST---YNVLISEFANVGKMLQARELLKEMGKRG 848
Query: 612 LLPEASTWAIVVQQLCK 628
+ P ST+ ++ LCK
Sbjct: 849 VSPNTSTYCTMISGLCK 865
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 184/407 (45%), Gaps = 55/407 (13%)
Query: 259 LIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLL-NQMVANKCVPNDVTFG 317
L AA+ + M G VP+ +N+L+ G ++ VSL+ ++M+A P+
Sbjct: 74 LYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALN 133
Query: 318 TLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEK 377
L+H F K GR S S+ L R + Y+++ISGL + G + A Q EM++
Sbjct: 134 VLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKM 190
Query: 378 GCEPNTVVYSALIDGLCREGK-------ADEARE----------------YLIE-----M 409
G P+TV Y+ LIDG C+ G DE E + IE M
Sbjct: 191 GILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDM 250
Query: 410 KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKL 469
G P+ T+SS++ + G + L+ +EM+ S N V Y+ L++ L K
Sbjct: 251 VMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIY 310
Query: 470 MEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYN 529
A+ ++ QM+ RGI +D+V Y+ ++ G A + + K F +ML ++ ++ P+V TY
Sbjct: 311 RHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTF-KMLLEDNQV-PNVVTYT 368
Query: 530 ILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVV 589
L++ + ++S A ++ ML++ P+ +T ++
Sbjct: 369 ALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVT---------------------YSSMIN 407
Query: 590 RLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
VK+ A ++ M D+ ++P T+ V+ L K AI
Sbjct: 408 GYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAI 454
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 144/518 (27%), Positives = 258/518 (49%), Gaps = 26/518 (5%)
Query: 120 AVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLV 179
A +L M+ + C + +++ SV+ +++G+ A+ + S I N + +
Sbjct: 287 ANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEML-SDGISMNVVAATSL 345
Query: 180 IKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGT 239
I CK + A+ +F + +P+S T+S L++ K G +++A+ +M++ G
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405
Query: 240 FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVS 299
P+ F + +I K A KL D S + + N NT++ LC++GK ++A
Sbjct: 406 TPSVFHVHTIIQGWLKGQKHEEALKLFDE-SFETGLANVFVCNTILSWLCKQGKTDEATE 464
Query: 300 LLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
LL++M + PN V++ ++ G +Q V ++ E+G + N Y YS LI G F
Sbjct: 465 LLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCF 524
Query: 360 KEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNS- 418
+ ++A+++ M E N VVY +I+GLC+ G+ +ARE L M + L S
Sbjct: 525 RNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSC 584
Query: 419 FTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQ 478
+Y+S++ GFF+ G+ A+ ++EM N + N + Y+ L+NGLCKN ++ +A+ + +
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 479 MLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQ 538
M ++G+KLD+ AY ++I GFC ++ LF+++L E L P YN L++ F
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELL--EEGLNPSQPIYNSLISGFRNL 702
Query: 539 NNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTI 598
N+ A+D+ ML G + CD+ T L+ L+K I
Sbjct: 703 GNMVAALDLYKKMLKDG-----LRCDLGTYT----------------TLIDGLLKDGNLI 741
Query: 599 GASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
AS++ M L+P+ + ++V L K K +
Sbjct: 742 LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVV 779
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/493 (27%), Positives = 248/493 (50%), Gaps = 41/493 (8%)
Query: 120 AVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLV 179
A+ LF +ME E +V +F+ ++ + G +ALEFY + + L + P+ + +
Sbjct: 358 ALVLFDKMEKEGPSPNSV-TFSVLIEWFRKNGEMEKALEFYKKM-EVLGLTPSVFHVHTI 415
Query: 180 IKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGT 239
I+ K ++A+++F A + + +T++ LCK+G+ DEA LL +M+ G
Sbjct: 416 IQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGI 474
Query: 240 FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVS 299
PN +N ++ C++ ++ A + N+ KG PN TY+ L+DG R A+
Sbjct: 475 GPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALE 534
Query: 300 LLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISL-EERGHRGNEYIYSSLISGL 358
++N M ++ N V + T+++G K G+ S +L ++ EE+ + Y+S+I G
Sbjct: 535 VVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGF 594
Query: 359 FKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL--- 415
FKEG+ + A+ ++EM G PN + Y++L++GLC+ + D+A E EMKNKG
Sbjct: 595 FKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDI 654
Query: 416 --------------------------------PNSFTYSSLMRGFFEAGDCHKAILVWKE 443
P+ Y+SL+ GF G+ A+ ++K+
Sbjct: 655 PAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKK 714
Query: 444 MKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQL 503
M + + Y+ LI+GL K+G L+ A ++ +M + G+ D + Y+ +++G
Sbjct: 715 MLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774
Query: 504 VDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITC 563
+ +K+F +M ++ + P+V YN ++ Y++ N+ A + + MLD+G PD T
Sbjct: 775 FVKVVKMFEEM--KKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF 832
Query: 564 DIFLKTLRDNMNP 576
DI + N+ P
Sbjct: 833 DILVSGQVGNLQP 845
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 227/497 (45%), Gaps = 72/497 (14%)
Query: 71 SLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRME-- 128
SLI ++D S L +M++E F V+ + + K EKA+ + +ME
Sbjct: 344 SLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVL 403
Query: 129 ----AEFHCKQTVKSF---------------------------NSVLNVIIQEGHFHRAL 157
+ FH ++ + N++L+ + ++G A
Sbjct: 404 GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEAT 463
Query: 158 EFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDG 217
E S + +S I PN +++N V+ C+ +D A VF I + P++YTYS L+DG
Sbjct: 464 ELLSKM-ESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDG 522
Query: 218 LCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLK----- 272
+ A+ +++ M N V+ +I+ LCK G +A +L+ NM +
Sbjct: 523 CFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCV 582
Query: 273 -------------------------------GCVPNEVTYNTLVDGLCRKGKLNKAVSLL 301
G PN +TY +L++GLC+ ++++A+ +
Sbjct: 583 SCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMR 642
Query: 302 NQMVANKCVPNDV-TFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFK 360
++M NK V D+ +G L+ GF K+ +++ L E G ++ IY+SLISG
Sbjct: 643 DEM-KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRN 701
Query: 361 EGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFT 420
G A+ L+K+M++ G + Y+ LIDGL ++G A E EM+ G +P+
Sbjct: 702 LGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEII 761
Query: 421 YSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQML 480
Y+ ++ G + G K + +++EMK N+ N + Y+ +I G + G L EA + +ML
Sbjct: 762 YTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML 821
Query: 481 SRGIKLDVVAYSSMIHG 497
+GI D + ++ G
Sbjct: 822 DKGILPDGATFDILVSG 838
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 166/371 (44%), Gaps = 33/371 (8%)
Query: 230 LLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
L+D + G N FN L++A K A +V+ M +P N + L
Sbjct: 150 LVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALV 209
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEY 349
++ L +A L ++MVA ++VT L+ +++ + ++ VL ERG +
Sbjct: 210 QRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSL 269
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKG-CEPNTVVYSALIDGLCREGKADEAREYLIE 408
+YS + K A L +EM EK C P+ Y+++I ++G D+A E
Sbjct: 270 LYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDE 329
Query: 409 MKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGK 468
M + G N +SL+ G + D A++++ +M+ + N V +S+LI KNG+
Sbjct: 330 MLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGE 389
Query: 469 LMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQ--------------- 513
+ +A+ +K+M G+ V ++I G+ Q ++ +KLF++
Sbjct: 390 MEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTI 449
Query: 514 --MLCQEAE---------------LQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGC 556
LC++ + + P+V +YN ++ +Q N+ A V + +L++G
Sbjct: 450 LSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGL 509
Query: 557 DPDFITCDIFL 567
P+ T I +
Sbjct: 510 KPNNYTYSILI 520
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 166/377 (44%), Gaps = 25/377 (6%)
Query: 260 IRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTL 319
+ +KLVD+ G N +N L++ + + + AV ++NQM+ +P
Sbjct: 145 VLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRT 204
Query: 320 VHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGC 379
+ V++ ++ + + G G+ L+ +E K A+++ +E+G
Sbjct: 205 LSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGA 264
Query: 380 EPNTVVYSALIDGLCREGKADEAREYLIEMKNKGH-LPNSFTYSSLMRGFFEAGDCHKAI 438
EP++++YS + C+ A L EMK K +P+ TY+S++ + G+ AI
Sbjct: 265 EPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAI 324
Query: 439 LVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGF 498
+ EM ++ + N V + LI G CKN L+ A++++ +M G + V +S +I F
Sbjct: 325 RLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWF 384
Query: 499 CNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDP 558
+++ ++ + +M + L P V + ++ + + A+ + + + G
Sbjct: 385 RKNGEMEKALEFYKKM--EVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLAN 442
Query: 559 DFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEAST 618
F+ C+ L L K+ +T A++++ M R + P +
Sbjct: 443 VFV-CNTILSW---------------------LCKQGKTDEATELLSKMESRGIGPNVVS 480
Query: 619 WAIVVQQLCKPRNIRKA 635
+ V+ C+ +N+ A
Sbjct: 481 YNNVMLGHCRQKNMDLA 497
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 120 AVNLFHRMEAE-FHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNL 178
A++L+ +M + C + ++ ++++ ++++G+ A E Y+ + +++ + P+ + + +
Sbjct: 708 ALDLYKKMLKDGLRCD--LGTYTTLIDGLLKDGNLILASELYTEM-QAVGLVPDEIIYTV 764
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG 238
++ L K G + V++F + N P+ Y+ ++ G +EG +DEA L DEM +G
Sbjct: 765 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 824
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKL 265
P+ F++L+S +RAA L
Sbjct: 825 ILPDGATFDILVSGQVGNLQPVRAASL 851
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 254/504 (50%), Gaps = 40/504 (7%)
Query: 68 SFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIV-IFKAYGKAHFPEKAVNLFHR 126
++ +LI L + + + +Q++ R V + + + KA G+A KA+++F++
Sbjct: 128 TYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQ 187
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
+ CK T ++NSV+ +++QEG + E Y+ +C + P+ +T++ +I + K+
Sbjct: 188 AKGR-KCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKL 246
Query: 187 GLVDQAVEVFR------------------GIHLR-----------------NCAPDSYTY 211
G D A+ +F GI+ + C+P YTY
Sbjct: 247 GRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTY 306
Query: 212 STLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSL 271
+ L+ GL K GR+DEA +M +G P+ N L++ L K G + + M +
Sbjct: 307 TELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGM 366
Query: 272 KGCVPNEVTYNTLVDGLCR-KGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRAS 330
C P V+YNT++ L K +++ S ++M A+ P++ T+ L+ G+ K R
Sbjct: 367 WRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVE 426
Query: 331 DGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALI 390
+L ++E+G Y SLI+ L K ++E A +L+KE+ E ++ VY+ +I
Sbjct: 427 KALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMI 486
Query: 391 DGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCN 450
+ GK EA + EMKN+G P+ + Y++LM G +AG ++A + ++M+ N C
Sbjct: 487 KHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCR 546
Query: 451 HNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKL 510
+ ++I++NG + G A+ +++ + GIK D V Y++++ F +A + ++ ++
Sbjct: 547 ADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARM 606
Query: 511 FNQMLCQEAELQPDVATYNILLNA 534
+M ++ + D TY+ +L+A
Sbjct: 607 MREM--KDKGFEYDAITYSSILDA 628
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 193/420 (45%), Gaps = 9/420 (2%)
Query: 151 GHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYT 210
G +R ++ V ++ + + + ++KAL + +V +A+ VF R C P S T
Sbjct: 143 GEMYRTIQ---EVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSST 199
Query: 211 YSTLMDGLCKEGRIDEAVSLLDEMQIEGT-FPNPFVFNVLISALCKKGDLIRAAKLVDNM 269
Y++++ L +EG+ ++ + EM EG FP+ ++ LIS+ K G A +L D M
Sbjct: 200 YNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEM 259
Query: 270 SLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRA 329
P E Y TL+ + GK+ KA+ L +M C P T+ L+ G K GR
Sbjct: 260 KDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRV 319
Query: 330 SDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSAL 389
+ + G + ++L++ L K G+ E ++ EM C P V Y+ +
Sbjct: 320 DEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTV 379
Query: 390 IDGLCREGKA--DEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNN 447
I L E KA E + +MK P+ FTYS L+ G+ + KA+L+ +EM
Sbjct: 380 IKALF-ESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEK 438
Query: 448 SCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQG 507
Y LIN L K + A ++K++ + Y+ MI F + +
Sbjct: 439 GFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEA 498
Query: 508 MKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
+ LFN+M Q + PDV YN L++ + I+ A +L M + GC D + +I L
Sbjct: 499 VDLFNEMKNQGS--GPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIIL 556
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 182/377 (48%), Gaps = 3/377 (0%)
Query: 88 LLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVI 147
L +MK EK + + Y K EKA++LF M+ C TV ++ ++ +
Sbjct: 255 LFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRA-GCSPTVYTYTELIKGL 313
Query: 148 IQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPD 207
+ G A FY + + + P+ + N ++ L KVG V++ VF + + C P
Sbjct: 314 GKAGRVDEAYGFYKDMLRD-GLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPT 372
Query: 208 SYTYSTLMDGLCK-EGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV 266
+Y+T++ L + + + E S D+M+ + P+ F +++LI CK + +A L+
Sbjct: 373 VVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLL 432
Query: 267 DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQ 326
+ M KG P Y +L++ L + + A L ++ N + + ++ F K
Sbjct: 433 EEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKC 492
Query: 327 GRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVY 386
G+ S+ + ++ +G + Y Y++L+SG+ K G A L ++M E GC + +
Sbjct: 493 GKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSH 552
Query: 387 SALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKN 446
+ +++G R G A E +K+ G P+ TY++L+ F AG +A + +EMK+
Sbjct: 553 NIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKD 612
Query: 447 NSCNHNEVCYSILINGL 463
++ + YS +++ +
Sbjct: 613 KGFEYDAITYSSILDAV 629
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 129/288 (44%), Gaps = 23/288 (7%)
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
+ S L+ L + A+ ++ + + C+P + Y+++I L +EG+ ++ E EM
Sbjct: 164 VLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEM 223
Query: 410 KNKGH-LPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGK 468
N+G P++ TYS+L+ + + G AI ++ EMK+N E Y+ L+ K GK
Sbjct: 224 CNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGK 283
Query: 469 LMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATY 528
+ +A+ ++++M G V Y+ +I G A VD+ + ML L PDV
Sbjct: 284 VEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDML--RDGLTPDVVFL 341
Query: 529 NILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELV 588
N L+N + + +V + M C P ++ + +K L ++ + + D++
Sbjct: 342 NNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMK 401
Query: 589 VRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
V P T++I++ CK + KA+
Sbjct: 402 ADSVS--------------------PSEFTYSILIDGYCKTNRVEKAL 429
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 240/485 (49%), Gaps = 57/485 (11%)
Query: 112 GKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNI-- 169
G+ F E V+ R F C+ V S+NS+++ + G A S V +SL
Sbjct: 70 GQVKFAEDIVHSMPR----FGCEPDVISYNSLIDGHCRNGDIRSA----SLVLESLRASH 121
Query: 170 ----QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
+P+ ++FN + K+ ++D+ V V+ G+ L+ C+P+ TYST +D CK G +
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDE-VFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
A+ M+ + PN F LI CK GDL A L M N VTY L+
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 286 DGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR 345
DG C+KG++ +A + ++MV ++ PN + + T++ GF ++G + + L + +G R
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 346 GNEYIYSSLISGL-----------------------------------FKEGKFEHAMQL 370
+ Y +ISGL FK G+ + A+ +
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360
Query: 371 WKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFE 430
+ +++E+G EP+ V S +IDG+ + G+ EA Y K N Y+ L+ +
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEK-----ANDVMYTVLIDALCK 415
Query: 431 AGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVA 490
GD + ++ ++ ++ Y+ I GLCK G L++A + +M+ G+ LD++A
Sbjct: 416 EGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLA 475
Query: 491 YSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNI 550
Y+++I+G + L+ + ++F++ML + + PD A +++L+ A+ ++ N++ A D+L
Sbjct: 476 YTTLIYGLASKGLMVEARQVFDEML--NSGISPDSAVFDLLIRAYEKEGNMAAASDLLLD 533
Query: 551 MLDQG 555
M +G
Sbjct: 534 MQRRG 538
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 128/511 (25%), Positives = 235/511 (45%), Gaps = 54/511 (10%)
Query: 156 ALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLM 215
+L+F +++ S P+ +FN V+ +CK+G V A ++ + C PD +Y++L+
Sbjct: 40 SLKFLAYLV-SRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLI 98
Query: 216 DGLCKEGRIDEAVSLLDEMQIEGTF---PNPFVFNVLISALCKKGDLIRAAKLVDNMSLK 272
DG C+ G I A +L+ ++ F P+ FN L + K L + M LK
Sbjct: 99 DGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM-LK 157
Query: 273 GCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDG 332
C PN VTY+T +D C+ G+L A+ + M + PN VTF L+ G+ K G
Sbjct: 158 CCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVA 217
Query: 333 ASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDG 392
S+ + N Y++LI G K+G+ + A +++ M+E EPN++VY+ +IDG
Sbjct: 218 VSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDG 277
Query: 393 LCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHN 452
+ G +D A ++L +M N+G + Y ++ G G +A + ++M+ + +
Sbjct: 278 FFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPD 337
Query: 453 EVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHG-------------FC 499
V ++ ++N K+G++ A+ ++ +++ RG + DVVA S+MI G FC
Sbjct: 338 MVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFC 397
Query: 500 NAQLVDQGMKLFNQMLCQ---------------EAELQPDVATYNILLNAFYQQNNISRA 544
+ D + LC+ EA L PD Y + +Q N+ A
Sbjct: 398 IEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDA 457
Query: 545 MDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKII 604
+ M+ +G D + L+ L + + A ++
Sbjct: 458 FKLKTRMVQEGLLLDLLA---------------------YTTLIYGLASKGLMVEARQVF 496
Query: 605 EVMLDRCLLPEASTWAIVVQQLCKPRNIRKA 635
+ ML+ + P+++ + ++++ K N+ A
Sbjct: 497 DEMLNSGISPDSAVFDLLIRAYEKEGNMAAA 527
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 208/459 (45%), Gaps = 50/459 (10%)
Query: 224 IDEAVSLLDEMQIEGTFPNPFV-----------------------------------FNV 248
+ EA+ L ++ P+PF FN
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK 308
++S +CK G + A +V +M GC P+ ++YN+L+DG CR G + A +L + A+
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 309 ---CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE 365
C P+ V+F +L +GF K + D V + + + N YS+ I K G+ +
Sbjct: 122 GFICKPDIVSFNSLFNGFSKM-KMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 366 HAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
A++ + M PN V ++ LIDG C+ G + A EM+ N TY++L+
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 426 RGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIK 485
GF + G+ +A ++ M + N + Y+ +I+G + G AM +ML++G++
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 486 LDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAM 545
LD+ AY +I G C + + ++ M ++++L PD+ + ++NA+++ + A+
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDM--EKSDLVPDMVIFTTMMNAYFKSGRMKAAV 358
Query: 546 DVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDE---------LVVRLVKRQR 596
++ + ++++G +PD + + + N + F E L+ L K
Sbjct: 359 NMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGD 418
Query: 597 TIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKA 635
I ++ + + L+P+ + + LCK N+ A
Sbjct: 419 FIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDA 457
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 203/450 (45%), Gaps = 34/450 (7%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVN-LFH 125
+S+ SLI+ + D S +L+ + R FI K IV F + K ++ +F
Sbjct: 92 ISYNSLIDGHCRNGDIRSASLVLESL-RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFV 150
Query: 126 RMEAEFHC-KQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALC 184
M C V ++++ ++ + G AL+ + H K + PN +TF +I C
Sbjct: 151 YMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSF-HSMKRDALSPNVVTFTCLIDGYC 209
Query: 185 KVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPF 244
K G ++ AV +++ + + + TY+ L+DG CK+G + A + M + PN
Sbjct: 210 KAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSL 269
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM 304
V+ +I ++GD A K + M +G + Y ++ GLC GKL +A ++ M
Sbjct: 270 VYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDM 329
Query: 305 VANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERG--------------------- 343
+ VP+ V F T+++ + K GR ++ L ERG
Sbjct: 330 EKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQL 389
Query: 344 ---------HRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLC 394
+ N+ +Y+ LI L KEG F +L+ ++ E G P+ +Y++ I GLC
Sbjct: 390 HEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLC 449
Query: 395 REGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEV 454
++G +A + M +G L + Y++L+ G G +A V+ EM N+ + +
Sbjct: 450 KQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSA 509
Query: 455 CYSILINGLCKNGKLMEAMMVWKQMLSRGI 484
+ +LI K G + A + M RG+
Sbjct: 510 VFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 108/246 (43%), Gaps = 43/246 (17%)
Query: 66 DLSFYS-LIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLF 124
D++ Y +I L + E+++ M++ V F + AY K+ + AVN++
Sbjct: 302 DITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMY 361
Query: 125 HRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALC 184
H++ E + V + +++++ I + G H A+ ++ C + N + + ++I ALC
Sbjct: 362 HKL-IERGFEPDVVALSTMIDGIAKNGQLHEAIVYF---CIE---KANDVMYTVLIDALC 414
Query: 185 KVGLVDQAVEVFRGIHLRNCAPDSY----------------------------------- 209
K G + +F I PD +
Sbjct: 415 KEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLL 474
Query: 210 TYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNM 269
Y+TL+ GL +G + EA + DEM G P+ VF++LI A K+G++ A+ L+ +M
Sbjct: 475 AYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDM 534
Query: 270 SLKGCV 275
+G V
Sbjct: 535 QRRGLV 540
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 223/444 (50%), Gaps = 8/444 (1%)
Query: 118 EKAVNLFHRMEAEFHCKQ--TVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLT 175
+ +++LF M C+ ++ F+ +L+ I + + + + + + L I N T
Sbjct: 63 DDSLDLFFHM---VQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM-QMLGIPHNLCT 118
Query: 176 FNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQ 235
N+++ C+ + A+ + P T+ +L++G C+ R+ +A+ + D+M
Sbjct: 119 CNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV 178
Query: 236 IEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLN 295
G PN ++N +I LCK + A L++ M G P+ VTYN+L+ GLC G+ +
Sbjct: 179 GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS 238
Query: 296 KAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLI 355
A +++ M + P+ TF L+ VK+GR S+ + R + YS LI
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Query: 356 SGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL 415
GL + + A +++ M+ KGC P+ V YS LI+G C+ K + + EM +G +
Sbjct: 299 YGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 416 PNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMV 475
N+ TY+ L++G+ AG + A +++ M + N + Y++L++GLC NGK+ +A+++
Sbjct: 359 RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVI 418
Query: 476 WKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAF 535
M G+ D+V Y+ +I G C A V ++ + CQ L PD+ TY ++
Sbjct: 419 LADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ--GLMPDIWTYTTMMLGL 476
Query: 536 YQQNNISRAMDVLNIMLDQGCDPD 559
Y++ A + M + G P+
Sbjct: 477 YKKGLRREADALFRKMKEDGILPN 500
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 215/409 (52%), Gaps = 7/409 (1%)
Query: 156 ALEFYSHV--CKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYST 213
+L+ + H+ C+ L P+ F+ ++ A+ K+ D + ++ + + + T +
Sbjct: 65 SLDLFFHMVQCRPL---PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 214 LMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKG 273
L++ C+ ++ A+S L +M G P+ F L++ C+ + A + D M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 274 CVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGA 333
PN V YNT++DGLC+ +++ A+ LLN+M + P+ VT+ +L+ G GR SD
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 334 SVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGL 393
++ + +R + + +++LI KEG+ A + ++EM+ + +P+ V YS LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 394 CREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNE 453
C + DEA E M +KG P+ TYS L+ G+ ++ + ++ EM N
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 454 VCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQ 513
V Y+ILI G C+ GKL A ++++M+ G+ +++ Y+ ++HG C+ +++ + +
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 514 MLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
M Q+ + D+ TYNI++ + ++ A D+ + QG PD T
Sbjct: 422 M--QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 215/422 (50%), Gaps = 27/422 (6%)
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
++D+++ L M P+ F+ L+SA+ K L + M + G N T N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER 342
L++ CR +L+ A+S L +M+ P+ VTFG+L++GF + R D + +
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 343 GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
G++ N IY+++I GL K + ++A+ L M + G P+ V Y++LI GLC G+ +A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 403 REYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILING 462
+ M + P+ FT+++L+ + G +A ++EM S + + V YS+LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 463 LCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQ 522
LC +L EA ++ M+S+G DVV YS +I+G+C ++ V+ GMKLF +M + +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM--SQRGVV 358
Query: 523 PDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGRE 582
+ TY IL+ + + ++ A ++ M+ G P+ IT ++ L L DN G+
Sbjct: 359 RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN------GK- 411
Query: 583 FLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAISECWSR 642
+++ +V L Q+ + I+ T+ I+++ +CK +++ W
Sbjct: 412 -IEKALVILADMQKNGMDADIV-------------TYNIIIRGMCKA----GEVADAWDI 453
Query: 643 LC 644
C
Sbjct: 454 YC 455
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 185/390 (47%), Gaps = 22/390 (5%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
LSF + KL + LL R RV+ A+ +F +
Sbjct: 136 LSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY-------------------DALYMFDQ 176
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
M + K V +N++++ + + AL+ + + K I P+ +T+N +I LC
Sbjct: 177 MVGMGY-KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD-GIGPDVVTYNSLISGLCSS 234
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
G A + + R PD +T++ L+D KEGR+ EA +EM P+ +
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA 306
++LI LC L A ++ M KGC P+ VTY+ L++G C+ K+ + L +M
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEH 366
V N VT+ L+ G+ + G+ + + + G N Y+ L+ GL GK E
Sbjct: 355 RGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEK 414
Query: 367 AMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMR 426
A+ + +M + G + + V Y+ +I G+C+ G+ +A + + +G +P+ +TY+++M
Sbjct: 415 ALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMML 474
Query: 427 GFFEAGDCHKAILVWKEMKNNSCNHNEVCY 456
G ++ G +A ++++MK + NE CY
Sbjct: 475 GLYKKGLRREADALFRKMKEDGILPNE-CY 503
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/447 (28%), Positives = 233/447 (52%), Gaps = 7/447 (1%)
Query: 119 KAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNL 178
+A++LF M E ++ F +LNVI + F + H+ + + + + T NL
Sbjct: 55 EALDLFTHM-VESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHL-QIMGVSHDLYTCNL 112
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG 238
++ C+ A + PD T+++L++G C R++EA+S++++M G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAV 298
P+ ++ +I +LCK G + A L D M G P+ V Y +LV+GLC G+ A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 299 SLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGL 358
SLL M K P+ +TF L+ FVK+G+ D + + N + Y+SLI+G
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 359 FKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNS 418
EG + A Q++ M KGC P+ V Y++LI+G C+ K D+A + EM KG N+
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 419 FTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQ 478
TY++L++GF + G + A V+ M + N Y++L++ LC NGK+ +A+M+++
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 479 MLSR---GIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAF 535
M R G+ ++ Y+ ++HG C +++ + +F M ++ E+ + TY I++
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM--RKREMDIGIITYTIIIQGM 470
Query: 536 YQQNNISRAMDVLNIMLDQGCDPDFIT 562
+ + A+++ + +G P+ +T
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKPNVVT 497
Score = 195 bits (496), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 200/381 (52%), Gaps = 4/381 (1%)
Query: 137 VKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVF 196
+ +F S++N A+ + + + + I+P+ + + +I +LCK G V+ A+ +F
Sbjct: 142 IVTFTSLINGFCLGNRMEEAMSMVNQMVE-MGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 197 RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
+ PD Y++L++GLC GR +A SLL M P+ FN LI A K+
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
Query: 257 GDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTF 316
G + A +L + M PN TY +L++G C +G +++A + M C P+ V +
Sbjct: 261 GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAY 320
Query: 317 GTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMME 376
+L++GF K + D + + ++G GN Y++LI G + GK A +++ M+
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380
Query: 377 KGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK---GHLPNSFTYSSLMRGFFEAGD 433
+G PN Y+ L+ LC GK +A +M+ + G PN +TY+ L+ G G
Sbjct: 381 RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440
Query: 434 CHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSS 493
KA++V+++M+ + + Y+I+I G+CK GK+ A+ ++ + S+G+K +VV Y++
Sbjct: 441 LEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTT 500
Query: 494 MIHGFCNAQLVDQGMKLFNQM 514
MI G L + LF +M
Sbjct: 501 MISGLFREGLKHEAHVLFRKM 521
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 201/384 (52%), Gaps = 5/384 (1%)
Query: 190 DQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVL 249
++A+++F + P ++ L++ + K + D ++L D +QI G + + N+L
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 250 ISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC 309
++ C+ A+ + M G P+ VT+ +L++G C ++ +A+S++NQMV
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 310 VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
P+ V + T++ K G + S+ +E G R + +Y+SL++GL G++ A
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF 429
L + M ++ +P+ + ++ALID +EGK +A E EM PN FTY+SL+ GF
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 430 EAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVV 489
G +A ++ M+ C + V Y+ LING CK K+ +AM ++ +M +G+ + +
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 490 AYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLN 549
Y+++I GF + ++F+ M+ + + P++ TYN+LL+ + +A+ +
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSR--GVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 550 IMLDQ---GCDPDFITCDIFLKTL 570
M + G P+ T ++ L L
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGL 435
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 176/348 (50%), Gaps = 2/348 (0%)
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
+ +EA+ L M P+ F L++ + K L D++ + G + T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER 342
L++ C+ + A S L +M+ P+ VTF +L++GF R + S++ + E
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 343 GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
G + + +Y+++I L K G +A+ L+ +M G P+ V+Y++L++GLC G+ +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 403 REYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILING 462
L M + P+ T+++L+ F + G A ++ EM S N Y+ LING
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 463 LCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQ 522
C G + EA ++ M ++G DVVAY+S+I+GFC + VD MK+F +M + L
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM--SQKGLT 349
Query: 523 PDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
+ TY L+ F Q + A +V + M+ +G P+ T ++ L L
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 174/331 (52%), Gaps = 5/331 (1%)
Query: 120 AVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLV 179
A++LF +ME + + V + S++N + G + A + K I+P+ +TFN +
Sbjct: 196 ALSLFDQME-NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR-KIKPDVITFNAL 253
Query: 180 IKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGT 239
I A K G A E++ + + AP+ +TY++L++G C EG +DEA + M+ +G
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGC 313
Query: 240 FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVS 299
FP+ + LI+ CK + A K+ MS KG N +TY TL+ G + GK N A
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE 373
Query: 300 LLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRG---NEYIYSSLIS 356
+ + MV+ PN T+ L+H G+ + +++R G N + Y+ L+
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433
Query: 357 GLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLP 416
GL GK E A+ ++++M ++ + + Y+ +I G+C+ GK A + +KG P
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKP 493
Query: 417 NSFTYSSLMRGFFEAGDCHKAILVWKEMKNN 447
N TY++++ G F G H+A +++++MK +
Sbjct: 494 NVVTYTTMISGLFREGLKHEAHVLFRKMKED 524
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 145/283 (51%), Gaps = 4/283 (1%)
Query: 134 KQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAV 193
K V +FN++++ ++EG F A E Y+ + + ++I PN T+ +I C G VD+A
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMIR-MSIAPNIFTYTSLINGFCMEGCVDEAR 302
Query: 194 EVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISAL 253
++F + + C PD Y++L++G CK ++D+A+ + EM +G N + LI
Sbjct: 303 QMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Query: 254 CKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK---CV 310
+ G A ++ +M +G PN TYN L+ LC GK+ KA+ + M +
Sbjct: 363 GQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVA 422
Query: 311 PNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQL 370
PN T+ L+HG G+ V + +R Y+ +I G+ K GK ++A+ L
Sbjct: 423 PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482
Query: 371 WKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKG 413
+ + KG +PN V Y+ +I GL REG EA +MK G
Sbjct: 483 FCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 222/425 (52%), Gaps = 12/425 (2%)
Query: 75 KLAASSDFASLEELLQQMKRERRVFIEKNFIV--IFKAYGKAHFPEKAVNLFHRMEAEFH 132
K +ASS F SL E+ RV F+V + Y F A+ F R+ +
Sbjct: 150 KNSASSVFISLVEM--------RVTPMCGFLVDALMITYTDLGFIPDAIQCF-RLSRKHR 200
Query: 133 CKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQA 192
++ ++L+ +++ FY + + N FN+++ CK G + A
Sbjct: 201 FDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDA-GFPLNVYVFNILMNKFCKEGNISDA 259
Query: 193 VEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISA 252
+VF I R+ P +++TL++G CK G +DE L +M+ T P+ F ++ LI+A
Sbjct: 260 QKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINA 319
Query: 253 LCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPN 312
LCK+ + A L D M +G +PN+V + TL+ G R G+++ +M++ P+
Sbjct: 320 LCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPD 379
Query: 313 DVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWK 372
V + TLV+GF K G +++ + RG R ++ Y++LI G + G E A+++ K
Sbjct: 380 IVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRK 439
Query: 373 EMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAG 432
EM + G E + V +SAL+ G+C+EG+ +A L EM G P+ TY+ +M F + G
Sbjct: 440 EMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKG 499
Query: 433 DCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYS 492
D + KEM+++ + V Y++L+NGLCK G++ A M+ ML+ G+ D + Y+
Sbjct: 500 DAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYN 559
Query: 493 SMIHG 497
+++ G
Sbjct: 560 TLLEG 564
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 209/404 (51%), Gaps = 18/404 (4%)
Query: 173 GLTFNLVIKALCKVGLVDQAVEVFR-------GIHLRNCAPDSYTYSTLMDGLCKEGRID 225
G + ++ +G + A++ FR + +R C L+D + K
Sbjct: 170 GFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCG-------NLLDRMMKLNPTG 222
Query: 226 EAVSLLDEMQIEGTFP-NPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTL 284
E+ ++ FP N +VFN+L++ CK+G++ A K+ D ++ + P V++NTL
Sbjct: 223 TIWGFYMEI-LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTL 281
Query: 285 VDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGH 344
++G C+ G L++ L +QM ++ P+ T+ L++ K+ + + + +RG
Sbjct: 282 INGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGL 341
Query: 345 RGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE 404
N+ I+++LI G + G+ + + +++M+ KG +P+ V+Y+ L++G C+ G AR
Sbjct: 342 IPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARN 401
Query: 405 YLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLC 464
+ M +G P+ TY++L+ GF GD A+ + KEM N + V +S L+ G+C
Sbjct: 402 IVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMC 461
Query: 465 KNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPD 524
K G++++A ++ML GIK D V Y+ M+ FC G KL +M Q P
Sbjct: 462 KEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM--QSDGHVPS 519
Query: 525 VATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLK 568
V TYN+LLN + + A +L+ ML+ G PD IT + L+
Sbjct: 520 VVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 156/294 (53%), Gaps = 2/294 (0%)
Query: 277 NEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVL 336
N +N L++ C++G ++ A + +++ P V+F TL++G+ K G +G +
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 337 ISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCRE 396
+E+ R + + YS+LI+ L KE K + A L+ EM ++G PN V+++ LI G R
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 397 GKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCY 456
G+ D +E +M +KG P+ Y++L+ GF + GD A + M +++ Y
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 457 SILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLC 516
+ LI+G C+ G + A+ + K+M GI+LD V +S+++ G C V + +ML
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML- 477
Query: 517 QEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
A ++PD TY ++++AF ++ + +L M G P +T ++ L L
Sbjct: 478 -RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 181/386 (46%), Gaps = 13/386 (3%)
Query: 59 WGSY--------KLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKA 110
WG Y L F L+ K + + +++ ++ + +F +
Sbjct: 225 WGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLING 284
Query: 111 YGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQ 170
Y K ++ L H+ME + V ++++++N + +E A + +CK +
Sbjct: 285 YCKVGNLDEGFRLKHQMEKS-RTRPDVFTYSALINALCKENKMDGAHGLFDEMCKR-GLI 342
Query: 171 PNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSL 230
PN + F +I + G +D E ++ + + PD Y+TL++G CK G + A ++
Sbjct: 343 PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402
Query: 231 LDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCR 290
+D M G P+ + LI C+ GD+ A ++ M G + V ++ LV G+C+
Sbjct: 403 VDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCK 462
Query: 291 KGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYI 350
+G++ A L +M+ P+DVT+ ++ F K+G A G +L ++ GH +
Sbjct: 463 EGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVT 522
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
Y+ L++GL K G+ ++A L M+ G P+ + Y+ L++G R A+ ++ Y I+
Sbjct: 523 YNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRH--ANSSKRY-IQKP 579
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHK 436
G + + +Y S++ A H+
Sbjct: 580 EIGIVADLASYKSIVNELDRASKDHR 605
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 237/488 (48%), Gaps = 6/488 (1%)
Query: 69 FYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRME 128
+ SL++ LA + D + + ++K+ + K++GK E+ + ++ +M+
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 129 AEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGL 188
E + T+ ++N ++N ++ F + E V +S I+P+ +T+N +IK CK G
Sbjct: 215 -ENGIEPTLYTYNFLMNGLVS-AMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 272
Query: 189 VDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNV 248
+A+E R + R D TY T++ + V+L EM +G P F++
Sbjct: 273 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 332
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK 308
+I LCK+G L + +NM KG PN Y L+DG + G + A+ LL++M+
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 309 CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAM 368
P+ VT+ +V+G K GR + + G N YSSLI GL K G+ + A
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 369 QLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM-KNKGHLPNSFTYSSLMRG 427
+L++EM EKGC ++ Y+ALID + K DEA M + +G +TY+ L+ G
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 428 FFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLD 487
F+ +A+ +W M + C+ L GLC +GK+ A + ++ G+ LD
Sbjct: 513 MFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD 572
Query: 488 VVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDV 547
A MI+ C A + + KL + + + E+ + T +++NA + AM +
Sbjct: 573 -AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRT--VMINALRKVGKADLAMKL 629
Query: 548 LNIMLDQG 555
++ + G
Sbjct: 630 MHSKIGIG 637
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 196/429 (45%), Gaps = 30/429 (6%)
Query: 211 YSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF---NVLISALCKKGDLIRAAKLVD 267
Y +L+D L +D + E++ F P N LI + K G + +
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIK---KFEFPMTVSAANALIKSFGKLGMVEELLWVWR 211
Query: 268 NMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQG 327
M G P TYN L++GL ++ A + M + + P+ VT+ T++ G+ K G
Sbjct: 212 KMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAG 271
Query: 328 RASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYS 387
+ L +E RGH ++ Y ++I + + F + L++EM EKG + +S
Sbjct: 272 QTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFS 331
Query: 388 ALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNN 447
+I GLC+EGK +E M KG PN Y+ L+ G+ ++G AI + M +
Sbjct: 332 LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE 391
Query: 448 SCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQG 507
+ V YS+++NGLCKNG++ EA+ + G+ ++ + YSS+I G A VD+
Sbjct: 392 GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 508 MKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQ-GCDPDFITCDIF 566
+LF +M E D YN L++AF + + A+ + M ++ GCD T I
Sbjct: 452 ERLFEEM--SEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTIL 509
Query: 567 LKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQL 626
L + K R A K+ ++M+D+ + P A+ + + L
Sbjct: 510 LSGM---------------------FKEHRNEEALKLWDMMIDKGITPTAACFRALSTGL 548
Query: 627 CKPRNIRKA 635
C + +A
Sbjct: 549 CLSGKVARA 557
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 155/340 (45%), Gaps = 39/340 (11%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRE-------------------------RRVF-- 99
+++ ++I+ A SDF S L Q+M + VF
Sbjct: 293 ITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFEN 352
Query: 100 -IEKN-------FIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEG 151
I K + V+ Y K+ E A+ L HRM E K V +++ V+N + + G
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF-KPDVVTYSVVVNGLCKNG 411
Query: 152 HFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTY 211
AL+++ H C+ + N + ++ +I L K G VD+A +F + + C DSY Y
Sbjct: 412 RVEEALDYF-HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCY 470
Query: 212 STLMDGLCKEGRIDEAVSLLDEM-QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMS 270
+ L+D K ++DEA++L M + EG + + +L+S + K+ A KL D M
Sbjct: 471 NALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMI 530
Query: 271 LKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRAS 330
KG P + L GLC GK+ +A +L+++ A V D +++ K GR
Sbjct: 531 DKGITPTAACFRALSTGLCLSGKVARACKILDEL-APMGVILDAACEDMINTLCKAGRIK 589
Query: 331 DGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQL 370
+ + + ERG I + +I+ L K GK + AM+L
Sbjct: 590 EACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKL 629
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 148/301 (49%), Gaps = 18/301 (5%)
Query: 352 SSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKN 411
++LI K G E + +W++M E G EP Y+ L++GL D A E + E+
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSA-ERVFEVME 249
Query: 412 KGHL-PNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
G + P+ TY+++++G+ +AG KA+ ++M+ +++ Y +I +
Sbjct: 250 SGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFG 309
Query: 471 EAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNI 530
+ ++++M +GI++ A+S +I G C +++G +F M+ + + +P+VA Y +
Sbjct: 310 SCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS--KPNVAIYTV 367
Query: 531 LLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQ----------DG 580
L++ + + ++ A+ +L+ M+D+G PD +T + + L N + DG
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG 427
Query: 581 ----REFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
F L+ L K R A ++ E M ++ ++ + ++ K R + +AI
Sbjct: 428 LAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAI 487
Query: 637 S 637
+
Sbjct: 488 A 488
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 23/194 (11%)
Query: 390 IDGLCREG-------------KADEARE--------YLIEMKNKGHLPNSFTYSSLMRGF 428
+DG CR+ K+DE RE + K K + N Y SL+
Sbjct: 103 LDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVL 162
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
A D + V E+K + LI K G + E + VW++M GI+ +
Sbjct: 163 ALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTL 222
Query: 489 VAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL 548
Y+ +++G +A VD ++F M + ++PD+ TYN ++ + + +AM+ L
Sbjct: 223 YTYNFLMNGLVSAMFVDSAERVFEVM--ESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKL 280
Query: 549 NIMLDQGCDPDFIT 562
M +G + D IT
Sbjct: 281 RDMETRGHEADKIT 294
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 158/610 (25%), Positives = 273/610 (44%), Gaps = 64/610 (10%)
Query: 49 AEIFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQ---QMKRERRVF------ 99
A++ +S +H+ SFY + + +F SL LL+ QM++ F
Sbjct: 80 AKLVRSRNHELA------FSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALM 133
Query: 100 IEKNFI-------VIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGH 152
+++ F ++ K + KAV+L M V S+N+V+ +
Sbjct: 134 LKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN-SLMPDVFSYNTVIRGFCEGKE 192
Query: 153 FHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYS 212
+ALE + + K + +T+ ++I A CK G +D+A+ + + D Y+
Sbjct: 193 LEKALELANEM-KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251
Query: 213 TLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLK 272
+L+ G C G +D +L DE+ G P +N LI CK G L A+++ + M +
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 273 GCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDG 332
G PN TY L+DGLC GK +A+ LLN M+ PN VT+ +++ K G +D
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 333 ASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG--CEPNTVVYSALI 390
++ +++R R + Y+ L+ GL +G + A +L M++ +P+ + Y+ALI
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 391 DGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCN 450
GLC+E + +A + + K + T + L+ +AGD +KA+ +WK++ ++
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491
Query: 451 HNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKL 510
N Y+ +I+G CK G L A + +M ++ V Y+ ++ C +DQ +L
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRL 551
Query: 511 FNQML---------------------------------CQEAELQPDVATYNILLNAFYQ 537
F +M A L PD+ TY+ L+N F +
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611
Query: 538 QNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRT 597
+ A+ + M+D G +PD CD LK Q + L ELV +LV +
Sbjct: 612 LGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC-----ISQGETDKLTELVKKLVDKDIV 666
Query: 598 IGASKIIEVM 607
+ VM
Sbjct: 667 LDKELTCTVM 676
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 204/400 (51%), Gaps = 6/400 (1%)
Query: 106 VIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCK 165
+ + + K ++A +F M E + V ++ +++ + G AL+ + + +
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFM-IERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
+ +PN +T+N++I LCK GLV AVE+ + R PD+ TY+ L+ GLC +G +D
Sbjct: 346 K-DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 226 EAVSLLDEMQIEGTFPNPFV--FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNT 283
EA LL M + ++ +P V +N LI LCK+ L +A + D + K + VT N
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464
Query: 284 LVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERG 343
L++ + G +NKA+ L Q+ +K V N T+ ++ GF K G + +L +
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 344 HRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAR 403
+ + + Y+ L+S L KEG + A +L++EM P+ V ++ +IDG + G A
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 404 EYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHN-EVCYSILING 462
L+ M G P+ FTYS L+ F + G +AI + +M ++ + +C S+L
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644
Query: 463 LCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQ 502
+ + G+ + + K+++ + I LD +++ CN+
Sbjct: 645 ISQ-GETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSS 683
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 23/263 (8%)
Query: 374 MMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGD 433
M+++G N ++ L+ GLCR + +A L EM+ +P+ F+Y++++RGF E +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 434 CHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSS 493
KA+ + EMK + C+ + V + ILI+ CK GK+ EAM K+M G++ D+V Y+S
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 494 MIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLD 553
+I GFC+ +D+G LF+++L E P TYN L+ F + + A ++ M++
Sbjct: 253 LIRGFCDCGELDRGKALFDEVL--ERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 554 QGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLL 613
+G P+ T L+ L +T A +++ +M+++
Sbjct: 311 RGVRPNVYT---------------------YTGLIDGLCGVGKTKEALQLLNLMIEKDEE 349
Query: 614 PEASTWAIVVQQLCKPRNIRKAI 636
P A T+ I++ +LCK + A+
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAV 372
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 168/329 (51%), Gaps = 2/329 (0%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAY-GKAHFPEKAVNLFH 125
+++ +I KL A E+++ MK+ R + ++ K E + L+
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 126 RMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCK 185
++ + V S+N++++ + +E H+AL+ Y + + L + +T N+++ + K
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG-AGDRVTTNILLNSTLK 471
Query: 186 VGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFV 245
G V++A+E+++ I +S TY+ ++DG CK G ++ A LL +M++ P+ F
Sbjct: 472 AGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFD 531
Query: 246 FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
+N L+S+LCK+G L +A +L + M P+ V++N ++DG + G + A SLL M
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS 591
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE 365
P+ T+ L++ F+K G + S + + G + +I S++ +G+ +
Sbjct: 592 RAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETD 651
Query: 366 HAMQLWKEMMEKGCEPNTVVYSALIDGLC 394
+L K++++K + + ++D +C
Sbjct: 652 KLTELVKKLVDKDIVLDKELTCTVMDYMC 680
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 221/445 (49%), Gaps = 39/445 (8%)
Query: 68 SFYSLIEKLAASSDFASLEELLQQMKRERRVFI--EKNFIVIFKAYGKAHFPEKAVNLFH 125
+++S++ KL+ + F +E L+ ++ E FI + + YG A E ++ +F
Sbjct: 85 TYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFL 144
Query: 126 RMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCK 185
R+ +F K++V+S N++LNV+IQ F + + +S I PN T NL++KA
Sbjct: 145 RI-PDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKA--- 200
Query: 186 VGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFV 245
LCK+ I+ A +LDE+ G PN
Sbjct: 201 --------------------------------LCKKNDIESAYKVLDEIPSMGLVPNLVT 228
Query: 246 FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
+ ++ +GD+ A ++++ M +G P+ TY L+DG C+ G+ ++A ++++ M
Sbjct: 229 YTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDME 288
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE 365
N+ PN+VT+G ++ K+ ++ + ++ + ER + + +I L ++ K +
Sbjct: 289 KNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVD 348
Query: 366 HAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
A LW++M++ C P+ + S LI LC+EG+ EAR+ E + KG +P+ TY++L+
Sbjct: 349 EACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLI 407
Query: 426 RGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIK 485
G E G+ +A +W +M C N Y++LI GL KNG + E + V ++ML G
Sbjct: 408 AGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCF 467
Query: 486 LDVVAYSSMIHGFCNAQLVDQGMKL 510
+ + + G + MK+
Sbjct: 468 PNKTTFLILFEGLQKLGKEEDAMKI 492
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 206/436 (47%), Gaps = 13/436 (2%)
Query: 143 VLNVIIQEGHFHRALEFYSHVCKS-LNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHL 201
++++I Q+ + AL+ + + KS N T++ ++ L + D + L
Sbjct: 52 LVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLM--ADL 109
Query: 202 RNCAPDSYTYSTLMDGLCKE----GRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCK-- 255
RN P L L + GR + ++ + + G + N L++ L +
Sbjct: 110 RNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQ 169
Query: 256 KGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVT 315
+ DL+ A S G PN T N LV LC+K + A +L+++ + VPN VT
Sbjct: 170 RFDLVHAMFKNSKESF-GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVT 228
Query: 316 FGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM 375
+ T++ G+V +G VL + +RG + Y+ L+ G K G+F A + +M
Sbjct: 229 YTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDME 288
Query: 376 EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCH 435
+ EPN V Y +I LC+E K+ EAR EM + +P+S ++ E
Sbjct: 289 KNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVD 348
Query: 436 KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
+A +W++M N+C + S LI+ LCK G++ EA ++ + +G ++ Y+++I
Sbjct: 349 EACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLI 407
Query: 496 HGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQG 555
G C + + +L++ M E + +P+ TYN+L+ + N+ + VL ML+ G
Sbjct: 408 AGMCEKGELTEAGRLWDDMY--ERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIG 465
Query: 556 CDPDFITCDIFLKTLR 571
C P+ T I + L+
Sbjct: 466 CFPNKTTFLILFEGLQ 481
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 173/401 (43%), Gaps = 30/401 (7%)
Query: 258 DLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLL----NQMVANKCVPND 313
DL L S G N TY++++ L R + SL+ N KC N
Sbjct: 63 DLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGEN- 121
Query: 314 VTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKE 373
F L+ + GR + + + + G + + ++L++ L + +F+ ++K
Sbjct: 122 -LFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKN 180
Query: 374 MMEK-GCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAG 432
E G PN + L+ LC++ + A + L E+ + G +PN TY++++ G+ G
Sbjct: 181 SKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARG 240
Query: 433 DCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYS 492
D A V +EM + + Y++L++G CK G+ EA V M I+ + V Y
Sbjct: 241 DMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYG 300
Query: 493 SMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIML 552
MI C + + +F++ML E PD + +++A + + + A + ML
Sbjct: 301 VMIRALCKEKKSGEARNMFDEML--ERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKML 358
Query: 553 DQGCDPDFITCDIFLKTLRDNM---NPPQDGREFLDE--------------LVVRLVKRQ 595
C PD + L TL + + R+ DE L+ + ++
Sbjct: 359 KNNCMPD----NALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKG 414
Query: 596 RTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
A ++ + M +R P A T+ ++++ L K N+++ +
Sbjct: 415 ELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGV 455
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 147/542 (27%), Positives = 259/542 (47%), Gaps = 30/542 (5%)
Query: 106 VIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFH---RALEFYSH 162
++ AY ++ +KA+ E+ + V ++NS++N G R L S
Sbjct: 230 IVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSE 289
Query: 163 VCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEG 222
S N+ +T+ +IK CK GL+++A VF + + D + Y LMDG C+ G
Sbjct: 290 RGVSRNV----VTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTG 345
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
+I +AV + D M G N + N LI+ CK G L+ A ++ M+ P+ TYN
Sbjct: 346 QIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYN 405
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER 342
TLVDG CR G +++A+ L +QM + VP +T+ L+ G+ + G D S+ + +R
Sbjct: 406 TLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKR 465
Query: 343 GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
G +E S+L+ LFK G F AM+LW+ ++ +G +T+ + +I GLC+ K +EA
Sbjct: 466 GVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEA 525
Query: 403 REYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILING 462
+E L + P TY +L G+++ G+ +A V + M+ Y+ LI+G
Sbjct: 526 KEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISG 585
Query: 463 LCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQ 522
K L + + ++ +RG+ V Y ++I G+CN ++D+ +M+ + L
Sbjct: 586 AFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLN 645
Query: 523 PDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGRE 582
++ + + N+ ++ + I A +L ++D D+ L Q +E
Sbjct: 646 VNICSK--IANSLFRLDKIDEACLLLQKIVD---------FDLLLPGY-------QSLKE 687
Query: 583 FLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKP---RNIRKAISEC 639
FL+ +K Q+ A + + L+P + + + LCK + RK S+
Sbjct: 688 FLEASATTCLKTQKI--AESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDL 745
Query: 640 WS 641
S
Sbjct: 746 LS 747
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 163/644 (25%), Positives = 286/644 (44%), Gaps = 95/644 (14%)
Query: 49 AEIFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIV-- 106
A +F + +L +++ SLI A D + +L+ M ER V +N +
Sbjct: 244 AMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMS-ERGV--SRNVVTYT 300
Query: 107 -IFKAYGKAHFPEKAVNLFHRM-EAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVC 164
+ K Y K E+A ++F + E + Q + + +++ + G A+ + ++
Sbjct: 301 SLIKGYCKKGLMEEAEHVFELLKEKKLVADQHM--YGVLMDGYCRTGQIRDAVRVHDNMI 358
Query: 165 KSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRI 224
+ + ++ N N +I CK G + +A ++F ++ + PD +TY+TL+DG C+ G +
Sbjct: 359 E-IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYV 417
Query: 225 DEAVSLLDEMQIEGTFPNPFVFNVLI---------------------------------- 250
DEA+ L D+M + P +N+L+
Sbjct: 418 DEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTL 477
Query: 251 -SALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC 309
AL K GD A KL +N+ +G + + +T N ++ GLC+ K+N+A +L+ + +C
Sbjct: 478 LEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC 537
Query: 310 VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
P T+ L HG+ K G + +V +E +G +Y++LISG FK
Sbjct: 538 KPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVAD 597
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKG---------HLPNSF- 419
L E+ +G P Y ALI G C G D+A EM KG + NS
Sbjct: 598 LVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLF 657
Query: 420 -----------------------TYSSLMRGFFEAG--DCHKAILVWKEMKNNSCNH--- 451
Y SL + F EA C K + + ++N++
Sbjct: 658 RLDKIDEACLLLQKIVDFDLLLPGYQSL-KEFLEASATTCLKTQKIAESVENSTPKKLLV 716
Query: 452 -NEVCYSILINGLCKNGKLMEAMMVWKQMLS--RGIKLDVVAYSSMIHGFCNAQLVDQGM 508
N + Y++ I GLCK GKL +A ++ +LS R I D Y+ +IHG A +++
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIP-DEYTYTILIHGCAIAGDINKAF 775
Query: 509 KLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLK 568
L ++M + + P++ TYN L+ + N+ RA +L+ + +G P+ IT + +
Sbjct: 776 TLRDEMALKG--IIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLID 833
Query: 569 TLRDNMNPPQDGR---EFLDELVVRLVKRQRTIGASKIIEVMLD 609
L + N + R + +++ +VR +Q + K EV+LD
Sbjct: 834 GLVKSGNVAEAMRLKEKMIEKGLVRGSDKQGDVDIPK--EVVLD 875
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 126/515 (24%), Positives = 227/515 (44%), Gaps = 61/515 (11%)
Query: 162 HVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKE 221
V K + P F++++K + GLV A+ VF + P + ++L+ L ++
Sbjct: 146 RVFKEFSFSPT--VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRK 203
Query: 222 GRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRA------------------- 262
G A+ + D+M P+ F +++++A C+ G++ +A
Sbjct: 204 GENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVT 263
Query: 263 -----------------AKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
+++ MS +G N VTY +L+ G C+KG + +A + +
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK 323
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE 365
K V + +G L+ G+ + G+ D V ++ E G R N I +SLI+G K G+
Sbjct: 324 EKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 383
Query: 366 HAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
A Q++ M + +P+ Y+ L+DG CR G DEA + +M K +P TY+ L+
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 426 RGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIK 485
+G+ G H + +WK M N +E+ S L+ L K G EAM +W+ +L+RG+
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Query: 486 LDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAM 545
D + + MI G C + V++ ++ + + +P V TY L + +Y+ N+ A
Sbjct: 504 TDTITLNVMISGLCKMEKVNEAKEILDNV--NIFRCKPAVQTYQALSHGYYKVGNLKEAF 561
Query: 546 DVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIE 605
V M +G P E + L+ K + + ++
Sbjct: 562 AVKEYMERKGIFPTI---------------------EMYNTLISGAFKYRHLNKVADLVI 600
Query: 606 VMLDRCLLPEASTWAIVVQQLCKPRNIRKAISECW 640
+ R L P +T+ ++ C I KA + C+
Sbjct: 601 ELRARGLTPTVATYGALITGWCNIGMIDKAYATCF 635
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 93/171 (54%), Gaps = 11/171 (6%)
Query: 171 PNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRN-CAPDSYTYSTLMDGLCKEGRIDEAVS 229
PN + +N+ I LCK G ++ A ++F + + PD YTY+ L+ G G I++A +
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 230 LLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
L DEM ++G PN +N LI LCK G++ RA +L+ + KG PN +TYNTL+DGL
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLE 340
+ G + +A+ L +M+ LV G KQG V++ E
Sbjct: 837 KSGNVAEAMRLKEKMIEK----------GLVRGSDKQGDVDIPKEVVLDPE 877
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 160/370 (43%), Gaps = 57/370 (15%)
Query: 131 FHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVD 190
F CK V+++ ++ + + G+ A ++ + I P +N +I K ++
Sbjct: 535 FRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERK-GIFPTIEMYNTLISGAFKYRHLN 593
Query: 191 QAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFV----- 245
+ ++ + R P TY L+ G C G ID+A + EM +G N +
Sbjct: 594 KVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIA 653
Query: 246 ---------------------FNVLISALCKKGDLIRA-----------AKLVDNMSLKG 273
F++L+ + + A A+ V+N + K
Sbjct: 654 NSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKK 713
Query: 274 C-VPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA-NKCVPNDVTFGTLVHGFVKQGRASD 331
VPN + YN + GLC+ GKL A L + +++ ++ +P++ T+ L+HG G +
Sbjct: 714 LLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINK 773
Query: 332 GASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALID 391
++ + +G N Y++LI GL K G + A +L ++ +KG PN + Y+ LID
Sbjct: 774 AFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLID 833
Query: 392 GLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCH--KAILVWKEMKNNSC 449
GL + G EA +M KG L+RG + GD K +++ E+K S
Sbjct: 834 GLVKSGNVAEAMRLKEKMIEKG----------LVRGSDKQGDVDIPKEVVLDPEVKLGST 883
Query: 450 -----NHNEV 454
N NE+
Sbjct: 884 GVIEMNSNEL 893
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 210/398 (52%), Gaps = 3/398 (0%)
Query: 137 VKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVF 196
V SF ++ + G ++ + + + PN + + +I CK G +++A ++F
Sbjct: 163 VYSFGILIKGCCEAGEIEKSFDLLIELTE-FGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 197 RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
+ + TY+ L++GL K G + + ++MQ +G FPN + +N +++ LCK
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 257 GDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTF 316
G A ++ D M +G N VTYNTL+ GLCR+ KLN+A +++QM ++ PN +T+
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 317 GTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMME 376
TL+ GF G+ S+ L+ RG + Y+ L+SG ++G A ++ KEM E
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 377 KGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHK 436
+G +P+ V Y+ LID R ++A + + M+ G +P+ TYS L+ GF G ++
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 437 AILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIH 496
A ++K M +C NEV Y+ +I G CK G A+ + K+M + + +V +Y MI
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Query: 497 GFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNA 534
C + + +L +M+ ++ + P + +++ A
Sbjct: 522 VLCKERKSKEAERLVEKMI--DSGIDPSTSILSLISRA 557
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 216/419 (51%), Gaps = 4/419 (0%)
Query: 140 FNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGI 199
FN +L ++ F++ F++ + + +F ++IK C+ G ++++ ++ +
Sbjct: 132 FNYLLTFVVGSSSFNQWWSFFNE--NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIEL 189
Query: 200 HLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDL 259
+P+ Y+TL+DG CK+G I++A L EM G N + VLI+ L K G
Sbjct: 190 TEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVK 249
Query: 260 IRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTL 319
+ ++ + M G PN TYN +++ LC+ G+ A + ++M N VT+ TL
Sbjct: 250 KQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTL 309
Query: 320 VHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGC 379
+ G ++ + ++ V+ ++ G N Y++LI G GK A+ L +++ +G
Sbjct: 310 IGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369
Query: 380 EPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAIL 439
P+ V Y+ L+ G CR+G A + + EM+ +G P+ TY+ L+ F + + KAI
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 440 VWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFC 499
+ M+ + YS+LI+G C G++ EA ++K M+ + + + V Y++MI G+C
Sbjct: 430 LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYC 489
Query: 500 NAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDP 558
+ +KL +M +E EL P+VA+Y ++ ++ A ++ M+D G DP
Sbjct: 490 KEGSSYRALKLLKEM--EEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 127/501 (25%), Positives = 234/501 (46%), Gaps = 25/501 (4%)
Query: 122 NLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIK 181
+L H + K + + ++N +Q + ++ +++ + + P FN ++
Sbjct: 79 SLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDN-GFVPGSNCFNYLLT 137
Query: 182 ALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFP 241
+ +Q F + D Y++ L+ G C+ G I+++ LL E+ G P
Sbjct: 138 FVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSP 196
Query: 242 NPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLL 301
N ++ LI CKKG++ +A L M G V NE TY L++GL + G + +
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMY 256
Query: 302 NQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKE 361
+M + PN T+ +++ K GR D V + ERG N Y++LI GL +E
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 362 GKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTY 421
K A ++ +M G PN + Y+ LIDG C GK +A ++K++G P+ TY
Sbjct: 317 MKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 422 SSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLS 481
+ L+ GF GD A + KEM+ ++V Y+ILI+ ++ + +A+ + M
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 482 RGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNI 541
G+ DV YS +IHGFC +++ +LF M+ E +P+ YN ++ + ++ +
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV--EKNCEPNEVIYNTMILGYCKEGSS 494
Query: 542 SRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGAS 601
RA+ +L M ++ P+ + ++ L K +++ A
Sbjct: 495 YRALKLLKEMEEKELAPNVASYRYMIEV---------------------LCKERKSKEAE 533
Query: 602 KIIEVMLDRCLLPEASTWAIV 622
+++E M+D + P S +++
Sbjct: 534 RLVEKMIDSGIDPSTSILSLI 554
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 176/356 (49%), Gaps = 24/356 (6%)
Query: 281 YNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLE 340
Y +++ + LN ++S N+MV N VP F L+ FV + + +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLT-FVVGSSSFNQWWSFFNEN 155
Query: 341 ERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
+ + Y + LI G + G+ E + L E+ E G PN V+Y+ LIDG C++G+ +
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 401 EAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILI 460
+A++ EM G + N TY+ L+ G F+ G + ++++M+ + N Y+ ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 461 NGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAE 520
N LCK+G+ +A V+ +M RG+ ++V Y+++I G C +++ K+ +QM +
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM--KSDG 333
Query: 521 LQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDG 580
+ P++ TYN L++ F + +A+ + + +G P +T +I
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI--------------- 378
Query: 581 REFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
LV ++ T GA+K+++ M +R + P T+ I++ + N+ KAI
Sbjct: 379 ------LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 150/343 (43%), Gaps = 39/343 (11%)
Query: 297 AVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLIS 356
A SLL Q+++ K T +L+H E + +Y +I+
Sbjct: 58 AQSLLLQVISGKIHSQFFTSSSLLHYLT---------------ESETSKTKFRLYEVIIN 102
Query: 357 GLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLP 416
+ ++ + EM++ G P + ++ L+ + ++ + E K+K L
Sbjct: 103 SYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVL- 161
Query: 417 NSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVW 476
+ +++ L++G EAG+ K+ + E+ + N V Y+ LI+G CK G++ +A ++
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 477 KQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFY 536
+M G+ + Y+ +I+G + QG +++ +M QE + P++ TYN ++N
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM--QEDGVFPNLYTYNCVMNQLC 279
Query: 537 QQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQR 596
+ A V + M ++G ++C+I + L+ L + +
Sbjct: 280 KDGRTKDAFQVFDEMRERG-----VSCNIVT----------------YNTLIGGLCREMK 318
Query: 597 TIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAISEC 639
A+K+++ M + P T+ ++ C + KA+S C
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC 361
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 221/470 (47%), Gaps = 33/470 (7%)
Query: 137 VKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVF 196
V++FN ++N EG AL + + P+ +T+N ++KA+ K G + E+
Sbjct: 204 VQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL 263
Query: 197 RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
+ P+ TY+ L+ G CK G + EA +++ M+ P+ +N+LI+ LC
Sbjct: 264 LDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNA 323
Query: 257 GDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTF 316
G + +L+D M P+ VTYNTL+DG G +A L+ QM + N VT
Sbjct: 324 GSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTH 383
Query: 317 GTLVHGFVKQ-GRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM 375
+ K+ R + V ++ G + Y +LI K G A+++ +EM
Sbjct: 384 NISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG 443
Query: 376 EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCH 435
+KG + NT+ + ++D LC+E K DEA L +G + + TY +L+ GFF
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVE 503
Query: 436 KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
KA+ +W EMK ++ LI GLC +GK AM + ++ G+ D ++S+I
Sbjct: 504 KALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII 563
Query: 496 HGFCNAQLVDQGMKLFNQM------------------LCQEA--------------ELQP 523
G+C V++ + +N+ LC+E E +
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV 623
Query: 524 DVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDN 573
D TYN +++AF + + A D+L+ M ++G +PD T + F+ L ++
Sbjct: 624 DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMED 673
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 132/510 (25%), Positives = 241/510 (47%), Gaps = 40/510 (7%)
Query: 75 KLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCK 134
+ +S +S E+ M + + F V+ Y E A+ + RM +EF
Sbjct: 178 RYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVN 237
Query: 135 QTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVE 194
++N++L + ++G E + K+ + PN +T+N ++ CK+G + +A +
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKN-GLVPNRVTYNNLVYGYCKLGSLKEAFQ 296
Query: 195 VFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALC 254
+ + N PD TY+ L++GLC G + E + L+D M+ P+ +N LI
Sbjct: 297 IVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCF 356
Query: 255 KKG--------------DLIRAAKLVDNMSLK----------------------GCVPNE 278
+ G D ++A ++ N+SLK G P+
Sbjct: 357 ELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDI 416
Query: 279 VTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLIS 338
VTY+TL+ + G L+ A+ ++ +M N +T T++ K+ + + ++L S
Sbjct: 417 VTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNS 476
Query: 339 LEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGK 398
+RG +E Y +LI G F+E K E A+++W EM + P +++LI GLC GK
Sbjct: 477 AHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGK 536
Query: 399 ADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSI 458
+ A E E+ G LP+ T++S++ G+ + G KA + E +S + +I
Sbjct: 537 TELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNI 596
Query: 459 LINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQE 518
L+NGLCK G +A+ + ++ ++D V Y++MI FC + + + L ++M +E
Sbjct: 597 LLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEM--EE 653
Query: 519 AELQPDVATYNILLNAFYQQNNISRAMDVL 548
L+PD TYN ++ + +S ++L
Sbjct: 654 KGLEPDRFTYNSFISLLMEDGKLSETDELL 683
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 204/433 (47%), Gaps = 42/433 (9%)
Query: 167 LNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGL-------- 218
L+ P+ F++ + A G A+++F+ + P+ T +TL+ GL
Sbjct: 125 LSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFS 184
Query: 219 ------------------------------CKEGRIDEAVSLLDEMQIEGTF-PNPFVFN 247
C EG++++A+ +L+ M E P+ +N
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 248 VLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVAN 307
++ A+ KKG L +L+ +M G VPN VTYN LV G C+ G L +A ++ M
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 308 KCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHA 367
+P+ T+ L++G G +G ++ +++ + + Y++LI G F+ G A
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 368 MQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKN-KGHLPNSFTYSSLMR 426
+L ++M G + N V ++ + LC+E K + + E+ + G P+ TY +L++
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424
Query: 427 GFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKL 486
+ + GD A+ + +EM N + + +++ LCK KL EA + RG +
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484
Query: 487 DVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMD 546
D V Y ++I GF + V++ ++++++M ++ ++ P V+T+N L+ AM+
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEM--KKVKITPTVSTFNSLIGGLCHHGKTELAME 542
Query: 547 VLNIMLDQGCDPD 559
+ + + G PD
Sbjct: 543 KFDELAESGLLPD 555
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 164/336 (48%), Gaps = 16/336 (4%)
Query: 137 VKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVF 196
+ ++++++ ++ G ALE + + I+ N +T N ++ ALCK +D+A +
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQK-GIKMNTITLNTILDALCKERKLDEAHNLL 474
Query: 197 RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
H R D TY TL+ G +E ++++A+ + DEM+ P FN LI LC
Sbjct: 475 NSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHH 534
Query: 257 GDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTF 316
G A + D ++ G +P++ T+N+++ G C++G++ KA N+ + + P++ T
Sbjct: 535 GKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTC 594
Query: 317 GTLVHGFVKQGRASDGASVLISL-EERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM 375
L++G K+G + +L EER + Y+++IS K+ K + A L EM
Sbjct: 595 NILLNGLCKEGMTEKALNFFNTLIEER--EVDTVTYNTMISAFCKDKKLKEAYDLLSEME 652
Query: 376 EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCH 435
EKG EP+ Y++ I L +GK E E L + K + S+ R + +
Sbjct: 653 EKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK--------FGSMKRDLQVETEKN 704
Query: 436 KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLME 471
A KE N + YS +I+ LC G+L E
Sbjct: 705 PATSESKE----ELNTEAIAYSDVIDELCSRGRLKE 736
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 159/333 (47%), Gaps = 38/333 (11%)
Query: 276 PNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRA---SDG 332
P++ ++ + +GK + A+ + +M+ K PN +T TL+ G V+ + S
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 333 ASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM-EKGCEPNTVVYSALID 391
V + + G N ++ L++G EGK E A+ + + M+ E P+ V Y+ ++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 392 GLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNH 451
+ ++G+ + +E L++MK G +PN TY++L+ G+ + G +A + + MK +
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 452 NEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLF 511
+ Y+ILINGLC G + E + + M S ++ DVV Y+++I G L + KL
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 512 NQM------------------LCQEAE----------------LQPDVATYNILLNAFYQ 537
QM LC+E + PD+ TY+ L+ A+ +
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 538 QNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
++S A++++ M +G + IT + L L
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 416 PNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCK---NGKLMEA 472
P+ + + + G H A+ ++++M N + + L+ GL + + + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 473 MMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILL 532
V+ M+ G+ L+V ++ +++G+C ++ + + +M+ E ++ PD TYN +L
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMV-SEFKVNPDNVTYNTIL 247
Query: 533 NAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLV 592
A ++ +S ++L M G P+ +T + LV
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVT---------------------YNNLVYGYC 286
Query: 593 KRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
K A +I+E+M +LP+ T+ I++ LC ++R+ +
Sbjct: 287 KLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGL 330
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 221/438 (50%), Gaps = 6/438 (1%)
Query: 136 TVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEV 195
++ F VL VI + F + Y H ++L I + +F ++I C+ + A+ +
Sbjct: 78 SIVDFTRVLTVIAKMNKFDIVIYLY-HKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 196 FRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCK 255
+ P T +L++G C+ R EAVSL+D M G PN ++N +I+ LCK
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 256 KGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVT 315
DL A ++ M KG + VTYNTL+ GL G+ A LL MV K PN +
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 316 FGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM 375
F L+ FVK+G + ++ + R N + Y+SLI+G G A ++ M+
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 376 EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCH 435
KGC P+ V Y+ LI G C+ + ++ + EM +G + ++FTY++L+ G+ +AG +
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 436 KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
A V+ M + + + V Y+IL++ LC NGK+ +A+++ + + + +D++ Y+ +I
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436
Query: 496 HGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQG 555
G C + + LF + ++PD Y +++ ++ A + M + G
Sbjct: 437 QGLCRTDKLKEAWCLFRSL--TRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Query: 556 CDPDFITCDIFLKTLRDN 573
P + I+ +TLRD+
Sbjct: 495 FMP---SERIYDETLRDH 509
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 202/381 (53%), Gaps = 2/381 (0%)
Query: 190 DQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVL 249
D A +F + P ++ ++ + K + D + L +M+ G + + F +L
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 250 ISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC 309
I C+ L A L+ M G P+ VT +L++G C+ + +AVSL++ M
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 310 VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
VPN V + T+++G K ++ V +E++G R + Y++LISGL G++ A +
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF 429
L ++M+++ +PN + ++ALID +EG EAR EM + +PN FTY+SL+ GF
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 430 EAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVV 489
G A ++ M + C + V Y+ LI G CK+ ++ + M ++ +M +G+ D
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 490 AYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLN 549
Y+++IHG+C A ++ K+FN+M+ + + PD+ TYNILL+ I +A+ ++
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMV--DCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 550 IMLDQGCDPDFITCDIFLKTL 570
+ D D IT +I ++ L
Sbjct: 419 DLQKSEMDVDIITYNIIIQGL 439
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 204/409 (49%), Gaps = 3/409 (0%)
Query: 153 FHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYS 212
F A + + +S I P+ + F V+ + K+ D + ++ + + D Y+++
Sbjct: 60 FDDAFSLFCEMLQSRPI-PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 213 TLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLK 272
L+ C+ R+ A++LL +M G P+ L++ C+ A LVD+M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 273 GCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDG 332
G VPN V YNT+++GLC+ LN A+ + M + VT+ TL+ G GR +D
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 333 ASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDG 392
A +L + +R N +++LI KEG A L+KEM+ + PN Y++LI+G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 393 LCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHN 452
C G +A+ M +KG P+ TY++L+ GF ++ + ++ EM +
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 453 EVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFN 512
Y+ LI+G C+ GKL A V+ +M+ G+ D+V Y+ ++ CN +++ + +
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 513 QMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFI 561
+ Q++E+ D+ TYNI++ + + + A + + +G PD I
Sbjct: 419 DL--QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAI 465
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 212/413 (51%), Gaps = 23/413 (5%)
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
+ D+A SL EM P+ F +++ + K L M G + ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER 342
L+ CR +L+ A++LL +M+ P+ VT G+L++GF + R + S++ S++
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 343 GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
G N IY+++I+GL K +A++++ M +KG + V Y+ LI GL G+ +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 403 REYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILING 462
L +M + PN +++L+ F + G+ +A ++KEM S N Y+ LING
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 463 LCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQ 522
C +G L +A ++ M+S+G DVV Y+++I GFC ++ V+ GMKLF +M Q L
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ--GLV 356
Query: 523 PDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGRE 582
D TYN L++ + Q ++ A V N M+D G PD +T +I L L +N G+
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN------GK- 409
Query: 583 FLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKA 635
+++ +V + Q++ II T+ I++Q LC+ +++A
Sbjct: 410 -IEKALVMVEDLQKSEMDVDII-------------TYNIIIQGLCRTDKLKEA 448
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 157/312 (50%), Gaps = 2/312 (0%)
Query: 120 AVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLV 179
A+ +F+ ME + + ++N++++ + G + A + K I PN + F +
Sbjct: 203 ALEVFYCMEKK-GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDPNVIFFTAL 260
Query: 180 IKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGT 239
I K G + +A +++ + R+ P+ +TY++L++G C G + +A + D M +G
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320
Query: 240 FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVS 299
FP+ +N LI+ CK + KL M+ +G V + TYNTL+ G C+ GKLN A
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380
Query: 300 LLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
+ N+MV P+ VT+ L+ G+ ++ L++ + Y+ +I GL
Sbjct: 381 VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 440
Query: 360 KEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSF 419
+ K + A L++ + KG +P+ + Y +I GLCR+G EA + MK G +P+
Sbjct: 441 RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSER 500
Query: 420 TYSSLMRGFFEA 431
Y +R + +
Sbjct: 501 IYDETLRDHYTS 512
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 171/363 (47%), Gaps = 25/363 (6%)
Query: 275 VPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDV-TFGTLVHGFVKQGRASDGA 333
+P+ V + ++ + + K + + L ++M N + +D+ +F L+H F + R S
Sbjct: 76 IPSIVDFTRVLTVIAKMNKFDIVIYLYHKM-ENLGISHDLYSFTILIHCFCRCSRLSLAL 134
Query: 334 SVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGL 393
++L + + G R + SL++G + +F+ A+ L M G PN V+Y+ +I+GL
Sbjct: 135 ALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGL 194
Query: 394 CREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNE 453
C+ + A E M+ KG ++ TY++L+ G +G A + ++M + N
Sbjct: 195 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 254
Query: 454 VCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQ 513
+ ++ LI+ K G L+EA ++K+M+ R + +V Y+S+I+GFC + +F+
Sbjct: 255 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 314
Query: 514 MLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDN 573
M+ + PDV TYN L+ F + + M + M QG D T
Sbjct: 315 MVSKGC--FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT----------- 361
Query: 574 MNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIR 633
+ L+ + + A K+ M+D + P+ T+ I++ LC I
Sbjct: 362 ----------YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIE 411
Query: 634 KAI 636
KA+
Sbjct: 412 KAL 414
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/508 (26%), Positives = 250/508 (49%), Gaps = 16/508 (3%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
LS + + KL D + LL + E R+ + +F + F E AV LF +
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRI---SEALALFGYMVETGFLE-AVALFDQ 216
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLN--IQPNGLTFNLVIKALC 184
M E V +FN+++N + EG R LE + V K + + + +T+ ++ +C
Sbjct: 217 M-VEIGLTPVVITFNTLINGLCLEG---RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 185 KVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPF 244
K+G A+ + + + PD YS ++D LCK+G +A L EM +G PN F
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM 304
+N +I C G A +L+ +M + P+ +T+N L+ ++GKL +A L ++M
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 305 VANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKF 364
+ P+ VT+ ++++GF K R D + + + ++++I + +
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRV 448
Query: 365 EHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSL 424
+ MQL +E+ +G NT Y+ LI G C + A++ EM + G P++ T + L
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508
Query: 425 MRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGI 484
+ GF E +A+ +++ ++ + + + V Y+I+I+G+CK K+ EA ++ + G+
Sbjct: 509 LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568
Query: 485 KLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRA 544
+ DV Y+ MI GFC + LF++M ++ +PD +TYN L+ + I ++
Sbjct: 569 EPDVQTYNVMISGFCGKSAISDANVLFHKM--KDNGHEPDNSTYNTLIRGCLKAGEIDKS 626
Query: 545 MDVLNIMLDQGCDPDFITCDIFLKTLRD 572
+++++ M G D T + + D
Sbjct: 627 IELISEMRSNGFSGDAFTIKMVADLITD 654
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 143/509 (28%), Positives = 237/509 (46%), Gaps = 84/509 (16%)
Query: 141 NSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIH 200
N V+ V ++ A+ Y + + I N +FN++IK C + ++ F +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKM-EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168
Query: 201 LRNCAPDSYTYSTLMDGLCKEGRIDEA---------------VSLLDEMQIEGTFPNPFV 245
PD T++TL+ GLC E RI EA V+L D+M G P
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVIT 228
Query: 246 FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLL---- 301
FN LI+ LC +G ++ AA LV+ M KG + VTY T+V+G+C+ G A++LL
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 302 -------------------------------NQMVANKCVPNDVTFGTLVHGFVKQGRAS 330
++M+ PN T+ ++ GF GR S
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 331 DGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALI 390
D +L + ER + +++LIS KEGK A +L EM+ + P+TV Y+++I
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 391 DGLCREGKADEAR-------------------------------EYLIEMKNKGHLPNSF 419
G C+ + D+A+ + L E+ +G + N+
Sbjct: 409 YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 420 TYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM 479
TY++L+ GF E + + A +++EM ++ + + +IL+ G C+N KL EA+ +++ +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528
Query: 480 LSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQN 539
I LD VAY+ +IHG C VD+ LF + E PDV TYN++++ F ++
Sbjct: 529 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE--PDVQTYNVMISGFCGKS 586
Query: 540 NISRAMDVLNIMLDQGCDPDFITCDIFLK 568
IS A + + M D G +PD T + ++
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 219/468 (46%), Gaps = 73/468 (15%)
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
R D A+SL +M+I N + FN+LI C L + ++ G P+ VT+N
Sbjct: 121 RPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFN 180
Query: 283 TLVDGLCRKGKLNKA---------------VSLLNQMVANKCVPNDVTFGTLVHGFVKQG 327
TL+ GLC + ++++A V+L +QMV P +TF TL++G +G
Sbjct: 181 TLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEG 240
Query: 328 RASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYS 387
R + A+++ + +G + Y ++++G+ K G + A+ L +M E +P+ V+YS
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300
Query: 388 ALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNN 447
A+ID LC++G +A+ EM KG PN FTY+ ++ GF G A + ++M
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Query: 448 SCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCN------- 500
N + + ++ LI+ K GKL EA + +ML R I D V Y+SMI+GFC
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 501 ------------------------AQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFY 536
A+ VD+GM+L ++ L + TYN L++ F
Sbjct: 421 KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI--SRRGLVANTTTYNTLIHGFC 478
Query: 537 QQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQR 596
+ +N++ A D+ M+ G PD ITC+I L +N E L+E
Sbjct: 479 EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN--------EKLEE---------- 520
Query: 597 TIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAISECWSRLC 644
A ++ EV+ + + + I++ +CK + E W C
Sbjct: 521 ---ALELFEVIQMSKIDLDTVAYNIIIHGMCKG----SKVDEAWDLFC 561
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 167/362 (46%), Gaps = 19/362 (5%)
Query: 66 DLSFYS-LIEKLAASSDFASLEELLQQMKRE---RRVFIEKNFIVIFKAYGKAHFPEKAV 121
D+ YS +I++L + + L +M + VF I F ++G+ ++ +
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 122 NLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYS---HVCKSLNIQPNGLTFNL 178
R E V +FN++++ ++EG A + H C I P+ +T+N
Sbjct: 355 ----RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC----IFPDTVTYNS 406
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG 238
+I CK D A +F + +PD T++T++D C+ R+DE + LL E+ G
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAV 298
N +N LI C+ +L A L M G P+ +T N L+ G C KL +A+
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 299 SLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGL 358
L + +K + V + ++HG K + + + SL G + Y+ +ISG
Sbjct: 523 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Query: 359 FKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNS 418
+ A L+ +M + G EP+ Y+ LI G + G+ D++ E + EM++ G ++
Sbjct: 583 CGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
Query: 419 FT 420
FT
Sbjct: 643 FT 644
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 220/421 (52%), Gaps = 7/421 (1%)
Query: 171 PNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSL 230
P+ + F ++ A + + + + + L + D Y+++ L+ C+ R+ A+S+
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 231 LDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCR 290
L +M G P+ F L+ C + A LV M G PN V YNTL+DGLC+
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 291 KGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYI 350
G+LN A+ LLN+M + VT+ TL+ G GR SD A +L + +R +
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
+++LI K+G + A +L+KEM++ +PN V Y+++I+GLC G+ +A++ M
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
+KG PN TY++L+ GF + + + +++ M N + Y+ LI+G C+ GKL
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
Query: 471 EAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNI 530
A+ ++ M+SR + D++ + ++HG C ++ + F+ M +E+E + YNI
Sbjct: 369 VALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM--RESEKYIGIVAYNI 426
Query: 531 LLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVR 590
+++ + + + +A ++ + +G PD T I + L N P ++ DEL+ R
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN-GPRREA----DELIRR 481
Query: 591 L 591
+
Sbjct: 482 M 482
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 221/436 (50%), Gaps = 16/436 (3%)
Query: 214 LMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKG 273
L G R ++A +L EM P+ F L++A M L G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 274 CVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGA 333
+ ++ L+ CR +L+ A+S+L +M+ P+ VTFG+L+HGF R D
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 334 SVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGL 393
S++I + + G+ N +Y++LI GL K G+ A++L EM +KG + V Y+ L+ GL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 394 CREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNE 453
C G+ +A L +M + P+ T+++L+ F + G+ +A ++KEM +S + N
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 454 VCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQ 513
V Y+ +INGLC +G+L +A + M S+G +VV Y+++I GFC ++VD+GMKLF +
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 514 MLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL--- 570
M C+ D+ TYN L++ + Q + A+D+ M+ + PD IT I L L
Sbjct: 342 MSCEG--FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399
Query: 571 ---------RDNMNPPQD--GREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTW 619
D+M + G + ++ L K + A ++ + + P+A T+
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Query: 620 AIVVQQLCKPRNIRKA 635
I++ LCK R+A
Sbjct: 460 TIMILGLCKNGPRREA 475
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 203/404 (50%), Gaps = 9/404 (2%)
Query: 152 HFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTY 211
+F + +E Y I + +F ++I C+ + A+ V + P T+
Sbjct: 92 YFSQKMELYG-------ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTF 144
Query: 212 STLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSL 271
+L+ G C RI +A SL+ M G PN V+N LI LCK G+L A +L++ M
Sbjct: 145 GSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEK 204
Query: 272 KGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASD 331
KG + VTYNTL+ GLC G+ + A +L M+ P+ VTF L+ FVKQG +
Sbjct: 205 KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDE 264
Query: 332 GASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALID 391
+ + + N Y+S+I+GL G+ A + + M KGC PN V Y+ LI
Sbjct: 265 AQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLIS 324
Query: 392 GLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNH 451
G C+ DE + M +G + FTY++L+ G+ + G A+ ++ M +
Sbjct: 325 GFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384
Query: 452 NEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLF 511
+ + + IL++GLC NG++ A++ + M + +VAY+ MIHG C A V++ +LF
Sbjct: 385 DIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF 444
Query: 512 NQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQG 555
++ + ++PD TY I++ + A +++ M ++G
Sbjct: 445 CRLPVE--GVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 155/315 (49%)
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVS 229
+PN + +N +I LCK G ++ A+E+ + + D TY+TL+ GLC GR +A
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 230 LLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
+L +M P+ F LI K+G+L A +L M PN VTYN++++GLC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEY 349
G+L A + M + C PN VT+ TL+ GF K +G + + G + +
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
Y++LI G + GK A+ ++ M+ + P+ + + L+ GLC G+ + A +M
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412
Query: 410 KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKL 469
+ Y+ ++ G +A KA ++ + + Y+I+I GLCKNG
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472
Query: 470 MEAMMVWKQMLSRGI 484
EA + ++M GI
Sbjct: 473 READELIRRMKEEGI 487
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 137/308 (44%), Gaps = 21/308 (6%)
Query: 354 LISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKG 413
L +G +FE A L+ EM+ P+ V ++ L+ + + + +M+ G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 414 HLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAM 473
+ ++++ L+ F A+ V +M + V + L++G C ++ +A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 474 MVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLN 533
+ M+ G + +VV Y+++I G C ++ ++L N+M ++ L DV TYN LL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM--EKKGLGADVVTYNTLLT 219
Query: 534 AFYQQNNISRAMDVLNIMLDQGCDPDFIT----CDIFLKTLRDNMNPPQD-GREFL---- 584
S A +L M+ + +PD +T D+F+K + N++ Q+ +E +
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK--QGNLDEAQELYKEMIQSSV 277
Query: 585 -------DELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAIS 637
+ ++ L R A K ++M + P T+ ++ CK R + + +
Sbjct: 278 DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM- 336
Query: 638 ECWSRLCC 645
+ + R+ C
Sbjct: 337 KLFQRMSC 344
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 5/197 (2%)
Query: 106 VIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCK 165
+ + K ++ + LF RM E + ++N++++ Q G AL+ + +
Sbjct: 321 TLISGFCKFRMVDEGMKLFQRMSCEGF-NADIFTYNTLIHGYCQVGKLRVALDIFCWMV- 378
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
S + P+ +T +++ LC G ++ A+ F + Y+ ++ GLCK +++
Sbjct: 379 SRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVE 438
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
+A L + +EG P+ + ++I LCK G A +L+ M +G + N
Sbjct: 439 KAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII---CQMNAED 495
Query: 286 DGLCRKGKLNKAVSLLN 302
D L NK +SL++
Sbjct: 496 DHLEEHSSSNKEISLVS 512
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/525 (27%), Positives = 254/525 (48%), Gaps = 24/525 (4%)
Query: 124 FHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKAL 183
FHR+ E + + S N VL + + A S V PN +TF +I
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDC-GPAPNVVTFCTLINGF 296
Query: 184 CKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNP 243
CK G +D+A ++F+ + R PD YSTL+DG K G + L + +G +
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 244 FVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQ 303
VF+ I K GDL A+ + M +G PN VTY L+ GLC+ G++ +A + Q
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 304 MVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGK 363
++ P+ VT+ +L+ GF K G G ++ + + G+ + IY L+ GL K+G
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGL 476
Query: 364 FEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSS 423
HAM+ +M+ + N VV+++LIDG CR + DEA + M G P+ T+++
Sbjct: 477 MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTT 536
Query: 424 LMR-GFFEAGDCHK-----AILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
+MR E C + ++ M+ N + + +++I+ L K ++ +A +
Sbjct: 537 VMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN 596
Query: 478 QMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQ 537
++ ++ D+V Y++MI G+C+ + +D+ ++F L + P+ T IL++ +
Sbjct: 597 NLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE--LLKVTPFGPNTVTLTILIHVLCK 654
Query: 538 QNNISRAMDVLNIMLDQGCDPDFIT----CDIFLKT--------LRDNMNPPQDGREFLD 585
N++ A+ + +IM ++G P+ +T D F K+ L + M +
Sbjct: 655 NNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVS 714
Query: 586 ELVV--RLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCK 628
++ L KR R A+ I +D LLP+ +AI+++ CK
Sbjct: 715 YSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 759
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/522 (25%), Positives = 245/522 (46%), Gaps = 23/522 (4%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
++F +LI + +L + M++ IE + I + +F + + H+
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRG---IEPDLIA-YSTLIDGYFKAGMLGMGHK 342
Query: 127 MEAE-FH--CKQTVKSFNSVLNVIIQEGHFHRALEFYSH-VCKSLNIQPNGLTFNLVIKA 182
+ ++ H K V F+S ++V ++ G A Y +C+ I PN +T+ ++IK
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ--GISPNVVTYTILIKG 400
Query: 183 LCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPN 242
LC+ G + +A ++ I R P TYS+L+DG CK G + +L ++M G P+
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 243 PFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLN 302
++ VL+ L K+G ++ A + M + N V +N+L+DG CR + ++A+ +
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 303 QMVANKCVPNDVTFGTLVH------GFVKQGRASDGASVLISLEERGHRGNEYIYSSLIS 356
M P+ TF T++ F K + + G + ++ + + + +I
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 580
Query: 357 GLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLP 416
LFK + E A + + ++E EP+ V Y+ +I G C + DEA +K P
Sbjct: 581 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 640
Query: 417 NSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVW 476
N+ T + L+ + D AI ++ M N V Y L++ K+ + + ++
Sbjct: 641 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 700
Query: 477 KQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFY 536
++M +GI +V+YS +I G C VD+ +F+Q + +A+L PDV Y IL+ +
Sbjct: 701 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI--DAKLLPDVVAYAILIRGYC 758
Query: 537 QQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQ 578
+ + A + ML G PD D+ + L + NPP+
Sbjct: 759 KVGRLVEAALLYEHMLRNGVKPD----DLLQRALSE-YNPPK 795
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 144/592 (24%), Positives = 261/592 (44%), Gaps = 84/592 (14%)
Query: 117 PEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTF 176
P A+ F AE K SF ++ +V+I+ G F A + + + I G F
Sbjct: 83 PNSALKYFRW--AEISGKDP--SFYTIAHVLIRNGMFDVADKVFDEM-----ITNRGKDF 133
Query: 177 NLV----------------IKALCKVGLVDQAVEVF-RGIHLRNCAPDSYTYSTL----- 214
N++ ++ C+ G+VD+A+E+F L P Y L
Sbjct: 134 NVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIG 193
Query: 215 ----------MDGLCKEGRIDEAVS----LLDEMQIEGTFPNPFVFNVLISALCKKGDLI 260
D LC+ G VS +LD + +G F+ L+ + ++
Sbjct: 194 SDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIV 253
Query: 261 RAAKLVDNMSLK---------------GCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
K++ +S+ G PN VT+ TL++G C++G++++A L M
Sbjct: 254 SCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVME 313
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE 365
P+ + + TL+ G+ K G G + +G + + ++SS I K G
Sbjct: 314 QRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLA 373
Query: 366 HAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
A ++K M+ +G PN V Y+ LI GLC++G+ EA ++ +G P+ TYSSL+
Sbjct: 374 TASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLI 433
Query: 426 RGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIK 485
GF + G+ ++++M + V Y +L++GL K G ++ AM +ML + I+
Sbjct: 434 DGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIR 493
Query: 486 LDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATY------NILLNAFYQQN 539
L+VV ++S+I G+C D+ +K+F M ++PDVAT+ +I+ +AF +
Sbjct: 494 LNVVVFNSLIDGWCRLNRFDEALKVFRLM--GIYGIKPDVATFTTVMRVSIMEDAFCKHM 551
Query: 540 NISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKR----- 594
+ + + ++M D C++ + L + +D +F + L+ ++
Sbjct: 552 KPTIGLQLFDLMQRNKISADIAVCNVVIHLLF-KCHRIEDASKFFNNLIEGKMEPDIVTY 610
Query: 595 ----------QRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
+R A +I E++ P T I++ LCK ++ AI
Sbjct: 611 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 662
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 231/461 (50%), Gaps = 4/461 (0%)
Query: 113 KAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPN 172
K+ F +A+ ++ RM E + ++++++S++ + + + + ++L ++PN
Sbjct: 200 KSRFCTEAMEVYRRMILEGF-RPSLQTYSSLMVGLGKRRDIDSVMGLLKEM-ETLGLKPN 257
Query: 173 GLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLD 232
TF + I+ L + G +++A E+ + + C PD TY+ L+D LC ++D A + +
Sbjct: 258 VYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFE 317
Query: 233 EMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKG 292
+M+ P+ + L+ DL + M G VP+ VT+ LVD LC+ G
Sbjct: 318 KMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAG 377
Query: 293 KLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYS 352
+A L+ M +PN T+ TL+ G ++ R D + ++E G + Y Y
Sbjct: 378 NFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYI 437
Query: 353 SLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK 412
I K G A++ +++M KG PN V +A + L + G+ EA++ +K+
Sbjct: 438 VFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDI 497
Query: 413 GHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEA 472
G +P+S TY+ +M+ + + G+ +AI + EM N C + + + LIN L K ++ EA
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 473 MMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILL 532
++ +M +K VV Y++++ G + + ++LF M+ + P+ T+N L
Sbjct: 558 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV--QKGCPPNTITFNTLF 615
Query: 533 NAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDN 573
+ + + ++ A+ +L M+D GC PD T + + L N
Sbjct: 616 DCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 227/479 (47%), Gaps = 50/479 (10%)
Query: 123 LFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKA 182
LF M+ C V ++N+++ +++ G A+ F+ H K L + P+ +T ++
Sbjct: 631 LFKMMD--MGCVPDVFTYNTIIFGLVKNGQVKEAMCFF-HQMKKL-VYPDFVTLCTLLPG 686
Query: 183 LCKVGLVDQAVEVFRGIHLRNCA--PDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG-- 238
+ K L++ A ++ L NCA P + + L+ + E ID AVS + + G
Sbjct: 687 VVKASLIEDAYKIITNF-LYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGIC 745
Query: 239 -----------------------------------TFPNPFVFNVLISALCKKGDLIRAA 263
P +N+LI L + D+I A
Sbjct: 746 RDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLE-ADMIEIA 804
Query: 264 KLVD-NMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHG 322
+ V + GC+P+ TYN L+D + GK+++ L +M ++C N +T ++ G
Sbjct: 805 QDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISG 864
Query: 323 FVKQGRASDGASVLISL-EERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEP 381
VK G D + L +R Y LI GL K G+ A QL++ M++ GC P
Sbjct: 865 LVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP 924
Query: 382 NTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVW 441
N +Y+ LI+G + G+AD A M +G P+ TYS L+ G + + +
Sbjct: 925 NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 984
Query: 442 KEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM-LSRGIKLDVVAYSSMIHGFCN 500
KE+K + N + VCY+++INGL K+ +L EA++++ +M SRGI D+ Y+S+I
Sbjct: 985 KELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGI 1044
Query: 501 AQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
A +V++ K++N++ Q A L+P+V T+N L+ + A V M+ G P+
Sbjct: 1045 AGMVEEAGKIYNEI--QRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/649 (22%), Positives = 285/649 (43%), Gaps = 91/649 (14%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
+++ LI+ L + +E+ ++MK R +I + + + +
Sbjct: 294 VTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSE 353
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
ME + H V +F +++ + + G+F A + V + I PN T+N +I L +V
Sbjct: 354 MEKDGHVPDVV-TFTILVDALCKAGNFGEAFDTLD-VMRDQGILPNLHTYNTLICGLLRV 411
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
+D A+E+F + P +YTY +D K G A+ ++M+ +G PN
Sbjct: 412 HRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 471
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA 306
N + +L K G A ++ + G VP+ VTYN ++ + G++++A+ LL++M+
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEH 366
N C P+ + +L++ K R + + + ++E + Y++L++GL K GK +
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Query: 367 AMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMR 426
A++L++ M++KGC PNT+ ++ L D LC+ + A + L +M + G +P+ FTY++++
Sbjct: 592 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Query: 427 GFFEAG-------------------------------------DCHKAI----------- 438
G + G D +K I
Sbjct: 652 GLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQP 711
Query: 439 --LVWKEMKNN----SCNHNEVCYS--ILINGLCKNGKLMEAMMVW-------------- 476
L W+++ + + N V +S ++ NG+C++G + ++
Sbjct: 712 ANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTL 771
Query: 477 --KQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNA 534
K G++ + Y+ +I G A +++ +F Q+ + PDVATYN LL+A
Sbjct: 772 FEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQV--KSTGCIPDVATYNFLLDA 829
Query: 535 FYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL--RDNMNPPQD-------GREF-- 583
+ + I ++ M C+ + IT +I + L N++ D R+F
Sbjct: 830 YGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSP 889
Query: 584 ----LDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCK 628
L+ L K R A ++ E MLD P + + I++ K
Sbjct: 890 TACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 131/504 (25%), Positives = 221/504 (43%), Gaps = 46/504 (9%)
Query: 90 QQMKRERRVFIE------KNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSV 143
+ M+ RR+ +E + + + GK + + L ME K V +F
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET-LGLKPNVYTFTIC 264
Query: 144 LNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRN 203
+ V+ + G + A E + P+ +T+ ++I ALC +D A EVF +
Sbjct: 265 IRVLGRAGKINEAYEILKRM-DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGR 323
Query: 204 CAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAA 263
PD TY TL+D +D EM+ +G P+ F +L+ ALCK G+ A
Sbjct: 324 HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383
Query: 264 KLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLN--------------------- 302
+D M +G +PN TYNTL+ GL R +L+ A+ L
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYY 443
Query: 303 --------------QMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNE 348
+M PN V ++ K GR + + L++ G +
Sbjct: 444 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503
Query: 349 YIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIE 408
Y+ ++ K G+ + A++L EMME GCEP+ +V ++LI+ L + + DEA + +
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563
Query: 409 MKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGK 468
MK P TY++L+ G + G +AI +++ M C N + ++ L + LCKN +
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 623
Query: 469 LMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATY 528
+ A+ + +M+ G DV Y+++I G V + M F+QM + + PD T
Sbjct: 624 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM---KKLVYPDFVTL 680
Query: 529 NILLNAFYQQNNISRAMDVLNIML 552
LL + + I A ++ L
Sbjct: 681 CTLLPGVVKASLIEDAYKIITNFL 704
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 181/379 (47%), Gaps = 2/379 (0%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+ AV+ R+ A C+ ++ + + A + K L +QP T+N
Sbjct: 730 DNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYN 789
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
L+I L + +++ A +VF + C PD TY+ L+D K G+IDE L EM
Sbjct: 790 LLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTH 849
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKL-VDNMSLKGCVPNEVTYNTLVDGLCRKGKLNK 296
N N++IS L K G++ A L D MS + P TY L+DGL + G+L +
Sbjct: 850 ECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYE 909
Query: 297 AVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLIS 356
A L M+ C PN + L++GF K G A ++ + + G R + YS L+
Sbjct: 910 AKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVD 969
Query: 357 GLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK-NKGHL 415
L G+ + + +KE+ E G P+ V Y+ +I+GL + + +EA EMK ++G
Sbjct: 970 CLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGIT 1029
Query: 416 PNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMV 475
P+ +TY+SL+ AG +A ++ E++ N ++ LI G +GK A V
Sbjct: 1030 PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAV 1089
Query: 476 WKQMLSRGIKLDVVAYSSM 494
++ M++ G + Y +
Sbjct: 1090 YQTMVTGGFSPNTGTYEQL 1108
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/507 (24%), Positives = 230/507 (45%), Gaps = 50/507 (9%)
Query: 106 VIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCK 165
++ K Y K ++A+ L M E C+ V NS++N + + A + + + K
Sbjct: 508 MMMKCYSKVGEIDEAIKLLSEM-MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM-K 565
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
+ ++P +T+N ++ L K G + +A+E+F G+ + C P++ T++TL D LCK +
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
A+ +L +M G P+ F +N +I L K G + A M K P+ VT TL+
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLL 684
Query: 286 DGLCRKGKLNKAV--------------------SLLNQMVANKCVPNDVTFGTLVHGFVK 325
G+ + + A L+ ++A + N V+F V
Sbjct: 685 PGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFS---ERLVA 741
Query: 326 QGRASDGASVLISL---------------------EERGHRGNEYIYSSLISGLFKEGKF 364
G DG S+L+ + ++ G + Y+ LI GL +
Sbjct: 742 NGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMI 801
Query: 365 EHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSL 424
E A ++ ++ GC P+ Y+ L+D + GK DE E EM N+ T++ +
Sbjct: 802 EIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIV 861
Query: 425 MRGFFEAGDCHKAI-LVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRG 483
+ G +AG+ A+ L + M + + Y LI+GL K+G+L EA +++ ML G
Sbjct: 862 ISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921
Query: 484 IKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISR 543
+ + Y+ +I+GF A D LF +M+ + ++PD+ TY++L++ +
Sbjct: 922 CRPNCAIYNILINGFGKAGEADAACALFKRMV--KEGVRPDLKTYSVLVDCLCMVGRVDE 979
Query: 544 AMDVLNIMLDQGCDPDFITCDIFLKTL 570
+ + + G +PD + ++ + L
Sbjct: 980 GLHYFKELKESGLNPDVVCYNLIINGL 1006
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 117/530 (22%), Positives = 233/530 (43%), Gaps = 51/530 (9%)
Query: 156 ALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLM 215
+ ++ V +LN+ T N +++AL G +++ VF + R D+ TY T+
Sbjct: 101 SFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIF 160
Query: 216 DGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCV 275
L +G + +A L +M+ G N + +N LI L K A ++ M L+G
Sbjct: 161 KSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFR 220
Query: 276 PNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASV 335
P+ TY++L+ GL ++ ++ + LL +M PN TF + + G+ ++ +
Sbjct: 221 PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 280
Query: 336 LISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCR 395
L +++ G + Y+ LI L K + A +++++M +P+ V Y L+D
Sbjct: 281 LKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD 340
Query: 396 EGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVC 455
D +++ EM+ GH+P+ T++ L+ +AG+ +A M++ N
Sbjct: 341 NRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHT 400
Query: 456 YSILINGLC-----------------------------------KNGKLMEAMMVWKQML 480
Y+ LI GL K+G + A+ +++M
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMK 460
Query: 481 SRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNN 540
++GI ++VA ++ ++ A + ++F + ++ L PD TYN+++ + +
Sbjct: 461 TKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL--KDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 541 ISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFL--------------DE 586
I A+ +L+ M++ GC+PD I + + TL + + F+ +
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 587 LVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
L+ L K + A ++ E M+ + P T+ + LCK + A+
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 628
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 136/284 (47%), Gaps = 2/284 (0%)
Query: 107 IFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKS 166
+ AYGK+ ++ L+ M C+ + N V++ +++ G+ AL+ Y +
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTH-ECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD 884
Query: 167 LNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDE 226
+ P T+ +I L K G + +A ++F G+ C P+ Y+ L++G K G D
Sbjct: 885 RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADA 944
Query: 227 AVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVD 286
A +L M EG P+ ++VL+ LC G + + G P+ V YN +++
Sbjct: 945 ACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIIN 1004
Query: 287 GLCRKGKLNKAVSLLNQMVANKCV-PNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR 345
GL + +L +A+ L N+M ++ + P+ T+ +L+ G + + ++ G
Sbjct: 1005 GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE 1064
Query: 346 GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSAL 389
N + +++LI G GK EHA +++ M+ G PNT Y L
Sbjct: 1065 PNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 146/554 (26%), Positives = 253/554 (45%), Gaps = 53/554 (9%)
Query: 124 FHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKAL 183
FHR+ E + + S N VL + + A S V PN +TF +I
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDC-GPAPNVVTFCTLINGF 296
Query: 184 CKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNP 243
CK G +D+A ++F+ + R PD YSTL+DG K G + L + +G +
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 244 FVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQ 303
VF+ I K GDL A+ + M +G PN VTY L+ GLC+ G++ +A + Q
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 304 MVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGK 363
++ P+ VT+ +L+ GF K G G ++ + + G+ + IY L+ GL K+G
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGL 476
Query: 364 FEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSS 423
HAM+ +M+ + N VV+++LIDG CR + DEA + M G P+ T+++
Sbjct: 477 MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTT 536
Query: 424 LMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGK--------------- 468
+MR G +A+ ++ M + + Y LI+ CK+ K
Sbjct: 537 VMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNK 596
Query: 469 --------------------LMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGM 508
+ +A + ++ ++ D+V Y++MI G+C+ + +D+
Sbjct: 597 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 656
Query: 509 KLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT----CD 564
++F L + P+ T IL++ + N++ A+ + +IM ++G P+ +T D
Sbjct: 657 RIFE--LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 714
Query: 565 IFLKT--------LRDNMNPPQDGREFLDELVV--RLVKRQRTIGASKIIEVMLDRCLLP 614
F K+ L + M + ++ L KR R A+ I +D LLP
Sbjct: 715 WFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP 774
Query: 615 EASTWAIVVQQLCK 628
+ +AI+++ CK
Sbjct: 775 DVVAYAILIRGYCK 788
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 145/589 (24%), Positives = 259/589 (43%), Gaps = 86/589 (14%)
Query: 117 PEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTF 176
P A+ F AE K SF ++ +V+I+ G F A + + + I G F
Sbjct: 83 PNSALKYFRW--AEISGKDP--SFYTIAHVLIRNGMFDVADKVFDEM-----ITNRGKDF 133
Query: 177 NLV----------------IKALCKVGLVDQAVEVF-RGIHLRNCAPDSYTYSTL----- 214
N++ ++ C+ G+VD+A+E+F L P Y L
Sbjct: 134 NVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIG 193
Query: 215 ----------MDGLCKEGRIDEAVS----LLDEMQIEGTFPNPFVFNVLISALCKKGDLI 260
D LC+ G VS +LD + +G F+ L+ + ++
Sbjct: 194 SDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIV 253
Query: 261 RAAKLVDNMSLK---------------GCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
K++ +S+ G PN VT+ TL++G C++G++++A L M
Sbjct: 254 SCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVME 313
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE 365
P+ + + TL+ G+ K G G + +G + + ++SS I K G
Sbjct: 314 QRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLA 373
Query: 366 HAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
A ++K M+ +G PN V Y+ LI GLC++G+ EA ++ +G P+ TYSSL+
Sbjct: 374 TASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLI 433
Query: 426 RGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIK 485
GF + G+ ++++M + V Y +L++GL K G ++ AM +ML + I+
Sbjct: 434 DGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIR 493
Query: 486 LDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAM 545
L+VV ++S+I G+C D+ +K+F M ++PDVAT+ ++ + + A+
Sbjct: 494 LNVVVFNSLIDGWCRLNRFDEALKVFRLM--GIYGIKPDVATFTTVMRVSIMEGRLEEAL 551
Query: 546 DVLNIMLDQGCDPDFIT----CDIFLKTLRDNMNPPQDGREFLD--------------EL 587
+ M G +PD + D F K ++ P G + D +
Sbjct: 552 FLFFRMFKMGLEPDALAYCTLIDAFCKHMK-----PTIGLQLFDLMQRNKISADIAVCNV 606
Query: 588 VVRLV-KRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKA 635
V+ L+ K R ASK +++ + P+ T+ ++ C R + +A
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/551 (24%), Positives = 246/551 (44%), Gaps = 52/551 (9%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
++F +LI + +L + M++ IE + I + +F + + H+
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRG---IEPDLIA-YSTLIDGYFKAGMLGMGHK 342
Query: 127 MEAE-FH--CKQTVKSFNSVLNVIIQEGHFHRALEFYSH-VCKSLNIQPNGLTFNLVIKA 182
+ ++ H K V F+S ++V ++ G A Y +C+ I PN +T+ ++IK
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ--GISPNVVTYTILIKG 400
Query: 183 LCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPN 242
LC+ G + +A ++ I R P TYS+L+DG CK G + +L ++M G P+
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 243 PFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLN 302
++ VL+ L K+G ++ A + M + N V +N+L+DG CR + ++A+ +
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 303 QMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG----- 357
M P+ TF T++ + +GR + + + + G + Y +LI
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHM 580
Query: 358 ------------------------------LFKEGKFEHAMQLWKEMMEKGCEPNTVVYS 387
LFK + E A + + ++E EP+ V Y+
Sbjct: 581 KPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 640
Query: 388 ALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNN 447
+I G C + DEA +K PN+ T + L+ + D AI ++ M
Sbjct: 641 TMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 700
Query: 448 SCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQG 507
N V Y L++ K+ + + ++++M +GI +V+YS +I G C VD+
Sbjct: 701 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 760
Query: 508 MKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
+F+Q + +A+L PDV Y IL+ + + + A + ML G PD D+
Sbjct: 761 TNIFHQAI--DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD----DLLQ 814
Query: 568 KTLRDNMNPPQ 578
+ L + NPP+
Sbjct: 815 RALSE-YNPPK 824
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 235/490 (47%), Gaps = 15/490 (3%)
Query: 61 SYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKA 120
++KL + S S + K S+D S ++ + + + + I K H +
Sbjct: 57 AFKLFETSSRSRVSK---SNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRH--SEP 111
Query: 121 VNLFHRMEAEFHCKQTVKSFNSVLNVIIQE----GHFHRALEFYSHVCKSLNIQPNGLTF 176
N+ HR+ Q+ K V +++I E G F AL V + + P+
Sbjct: 112 SNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEAL----WVSREMKCSPDSKAC 167
Query: 177 NLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQI 236
++ L + D ++ + R PD + Y L K+G + LLDEM
Sbjct: 168 LSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTS 227
Query: 237 EGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNK 296
G PN +++ + I LC+ + A K+ + M G +PN TY+ ++DG C+ G + +
Sbjct: 228 LGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQ 287
Query: 297 AVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLIS 356
A L +++ + +PN V FGTLV GF K S+ + + + G N Y+Y+ LI
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347
Query: 357 GLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLP 416
G K G A+ L EM P+ Y+ LI+GLC E + EA +MKN+ P
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP 407
Query: 417 NSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVW 476
+S TY+SL+ G+ + + +A+ + EM + N + +S LI+G C + AM ++
Sbjct: 408 SSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLY 467
Query: 477 KQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFY 536
+M +GI DVV Y+++I + + ++L++ ML EA + P+ T+ L++ F+
Sbjct: 468 FEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML--EAGIHPNDHTFACLVDGFW 525
Query: 537 QQNNISRAMD 546
++ +S A+D
Sbjct: 526 KEGRLSVAID 535
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 185/380 (48%), Gaps = 3/380 (0%)
Query: 165 KSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRI 224
K + PN T++ +I CK G V QA +++ I + P+ + TL+DG CK +
Sbjct: 261 KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAREL 320
Query: 225 DEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTL 284
A SL M G PN +V+N LI CK G+++ A L+ M P+ TY L
Sbjct: 321 VTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTIL 380
Query: 285 VDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGH 344
++GLC + ++ +A L +M + P+ T+ +L+HG+ K+ + + G
Sbjct: 381 INGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGV 440
Query: 345 RGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE 404
N +S+LI G + AM L+ EM KG P+ V Y+ALID +E EA
Sbjct: 441 EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALR 500
Query: 405 YLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLC 464
+M G PN T++ L+ GF++ G AI ++E N V ++ LI GLC
Sbjct: 501 LYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLC 560
Query: 465 KNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPD 524
+NG ++ A + M S GI D+ +Y SM+ G + + M L M+ + + P+
Sbjct: 561 QNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMI--KTGILPN 618
Query: 525 VATYNILLNAFYQQNNISRA 544
+ N LL FYQ N ++
Sbjct: 619 LLV-NQLLARFYQANGYVKS 637
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 194/385 (50%), Gaps = 5/385 (1%)
Query: 175 TFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEM 234
F+L+I ++GL ++A+ V R + C+PDS ++++GL + R D M
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190
Query: 235 QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKL 294
G P+ ++ VL K+G + KL+D M+ G PN Y + LCR K+
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250
Query: 295 NKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSL 354
+A + M + +PN T+ ++ G+ K G + + N ++ +L
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 355 ISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGH 414
+ G K + A L+ M++ G +PN VY+ LI G C+ G EA L EM++
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 415 LPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMM 474
P+ FTY+ L+ G +A ++++MKN + Y+ LI+G CK + +A+
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430
Query: 475 VWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNA 534
+ +M + G++ +++ +S++I G+CN + + M L+ +M + + PDV TY L++A
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKG--IVPDVVTYTALIDA 488
Query: 535 FYQQNNISRAMDVLNIMLDQGCDPD 559
+++ N+ A+ + + ML+ G P+
Sbjct: 489 HFKEANMKEALRLYSDMLEAGIHPN 513
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 158/318 (49%), Gaps = 5/318 (1%)
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM 304
VF++LI + G A + M C P+ ++++GL R+ + + M
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190
Query: 305 VANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKF 364
++ VP+ + L KQG S +L + G + N YIY+ I L ++ K
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250
Query: 365 EHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSL 424
E A ++++ M + G PN YSA+IDG C+ G +A E+ LPN + +L
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 425 MRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGI 484
+ GF +A + A ++ M + N Y+ LI+G CK+G ++EA+ + +M S +
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 485 KLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRA 544
DV Y+ +I+G C V + +LF +M + + P ATYN L++ + ++ N+ +A
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKM--KNERIFPSSATYNSLIHGYCKEYNMEQA 428
Query: 545 MDVLNIMLDQGCDPDFIT 562
+D+ + M G +P+ IT
Sbjct: 429 LDLCSEMTASGVEPNIIT 446
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 142/332 (42%), Gaps = 58/332 (17%)
Query: 308 KCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHA 367
KC P+ ++++G V++ R + RG + +IY L FK+G +
Sbjct: 159 KCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKK 218
Query: 368 MQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRG 427
+L EM G +PN +Y+ I LCR+ K +EA + MK G LPN +TYS++
Sbjct: 219 EKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAM--- 275
Query: 428 FFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLD 487
I+G CK G + +A ++K++L + +
Sbjct: 276 --------------------------------IDGYCKTGNVRQAYGLYKEILVAELLPN 303
Query: 488 VVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDV 547
VV + +++ GFC A+ + LF M+ + + P++ YN L++ + N+ A+ +
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMV--KFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 548 LNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVM 607
L+ M PD T I L+ L + A+++ + M
Sbjct: 362 LSEMESLNLSPDVFTYTI---------------------LINGLCIEDQVAEANRLFQKM 400
Query: 608 LDRCLLPEASTWAIVVQQLCKPRNIRKAISEC 639
+ + P ++T+ ++ CK N+ +A+ C
Sbjct: 401 KNERIFPSSATYNSLIHGYCKEYNMEQALDLC 432
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 9/178 (5%)
Query: 105 IVIFKAYGKAHFPE----KAVNLFHRM-EAEFHCKQTVKSFNSVLNVIIQEGHFHRALEF 159
+V + A AHF E +A+ L+ M EA H +F +++ +EG A++F
Sbjct: 479 VVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPND--HTFACLVDGFWKEGRLSVAIDF 536
Query: 160 YSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLC 219
Y + + N + F +I+ LC+ G + +A F + PD +Y +++ G
Sbjct: 537 YQENNQQRSCW-NHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHL 595
Query: 220 KEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPN 277
+E RI + + L +M G PN V N L++ + +++A + N S V N
Sbjct: 596 QEKRITDTMMLQCDMIKTGILPNLLV-NQLLARFYQANGYVKSACFLTNSSRLKTVSN 652
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 161/614 (26%), Positives = 286/614 (46%), Gaps = 45/614 (7%)
Query: 62 YKLGDLSFYSLI--EKLAASSDFASLEELLQQMKRERRVF--IEKNFIV---IFKAYGKA 114
Y SF +L+ LA F L+ +L+Q+ +E F E +V + +
Sbjct: 78 YAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDMLLFLSSRL 137
Query: 115 HFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGL 174
+ ++ + +M+ + + + +S+NSVL HF + + V K + N
Sbjct: 138 RMVDDSLYILKKMKDQ-NLNVSTQSYNSVLY------HFRETDKMWD-VYKEIK-DKNEH 188
Query: 175 TFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEM 234
T++ V+ LC+ ++ AV R ++ P +++++M G CK G +D A S +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 235 QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKL 294
G P+ + N+LI+ LC G + A +L +M+ G P+ VTYN L G G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 295 NKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSS- 353
+ A ++ M+ P+ +T+ L+ G + G G +L + RG N I S
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 354 LISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKG 413
++SGL K G+ + A+ L+ +M G P+ V YS +I GLC+ GK D A EM +K
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 414 HLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAM 473
LPNS T+ +L+ G + G +A + + ++ + V Y+I+I+G K+G + EA+
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 474 MVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLN 533
++K ++ GI V ++S+I+G+C Q + + K+ + + + L P V +Y L++
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD--VIKLYGLAPSVVSYTTLMD 546
Query: 534 AFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL-----RDNMNPPQDGREF----- 583
A+ N ++ M +G P +T + K L +N N R F
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606
Query: 584 ----------------LDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLC 627
+ ++ L + + GA +E+M R L ++T+ I++ LC
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666
Query: 628 KPRNIRKAISECWS 641
IRKA S +S
Sbjct: 667 VYGYIRKADSFIYS 680
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 175/351 (49%), Gaps = 12/351 (3%)
Query: 177 NLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQI 236
++++ LCK G +D+A+ +F + +PD YS ++ GLCK G+ D A+ L DEM
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 237 EGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNK 296
+ PN L+ LC+KG L+ A L+D++ G + V YN ++DG + G + +
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 297 AVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLIS 356
A+ L ++ P+ TF +L++G+ K ++ +L ++ G + Y++L+
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 357 GLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA----REYLIE---- 408
G + +L +EM +G P V YS + GLCR K + RE + E
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606
Query: 409 ----MKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLC 464
M+++G P+ TY+++++ A + + MK+ + + + Y+ILI+ LC
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666
Query: 465 KNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
G + +A + + + L AY+++I C + +KLF+Q+L
Sbjct: 667 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLL 717
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 178/375 (47%), Gaps = 13/375 (3%)
Query: 143 VLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLR 202
+L+ + + G AL ++ + K+ + P+ + +++VI LCK+G D A+ ++ + +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 203 NCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRA 262
P+S T+ L+ GLC++G + EA SLLD + G + ++N++I K G + A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 263 AKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHG 322
+L + G P+ T+N+L+ G C+ + +A +L+ + P+ V++ TL+
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 323 FVKQGRASDGASVLISLEERGHRGNEYIYSSLISGL------------FKEGKFEHAMQL 370
+ G + ++ G YS + GL +E FE Q
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 607
Query: 371 WKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFE 430
++M +G P+ + Y+ +I LCR A +L MK++ +S TY+ L+
Sbjct: 608 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 667
Query: 431 AGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVA 490
G KA ++ + + ++ Y+ LI C G A+ ++ Q+L RG + +
Sbjct: 668 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD 727
Query: 491 YSSMIHGFCNAQLVD 505
YS++I+ C L++
Sbjct: 728 YSAVINRLCRRHLMN 742
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 161/614 (26%), Positives = 286/614 (46%), Gaps = 45/614 (7%)
Query: 62 YKLGDLSFYSLI--EKLAASSDFASLEELLQQMKRERRVF--IEKNFIV---IFKAYGKA 114
Y SF +L+ LA F L+ +L+Q+ +E F E +V + +
Sbjct: 78 YAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDMLLFLSSRL 137
Query: 115 HFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGL 174
+ ++ + +M+ + + + +S+NSVL HF + + V K + N
Sbjct: 138 RMVDDSLYILKKMKDQ-NLNVSTQSYNSVLY------HFRETDKMWD-VYKEIK-DKNEH 188
Query: 175 TFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEM 234
T++ V+ LC+ ++ AV R ++ P +++++M G CK G +D A S +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 235 QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKL 294
G P+ + N+LI+ LC G + A +L +M+ G P+ VTYN L G G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 295 NKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSS- 353
+ A ++ M+ P+ +T+ L+ G + G G +L + RG N I S
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 354 LISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKG 413
++SGL K G+ + A+ L+ +M G P+ V YS +I GLC+ GK D A EM +K
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 414 HLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAM 473
LPNS T+ +L+ G + G +A + + ++ + V Y+I+I+G K+G + EA+
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 474 MVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLN 533
++K ++ GI V ++S+I+G+C Q + + K+ + + + L P V +Y L++
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD--VIKLYGLAPSVVSYTTLMD 546
Query: 534 AFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL-----RDNMNPPQDGREF----- 583
A+ N ++ M +G P +T + K L +N N R F
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606
Query: 584 ----------------LDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLC 627
+ ++ L + + GA +E+M R L ++T+ I++ LC
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666
Query: 628 KPRNIRKAISECWS 641
IRKA S +S
Sbjct: 667 VYGYIRKADSFIYS 680
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 175/351 (49%), Gaps = 12/351 (3%)
Query: 177 NLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQI 236
++++ LCK G +D+A+ +F + +PD YS ++ GLCK G+ D A+ L DEM
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 237 EGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNK 296
+ PN L+ LC+KG L+ A L+D++ G + V YN ++DG + G + +
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 297 AVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLIS 356
A+ L ++ P+ TF +L++G+ K ++ +L ++ G + Y++L+
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 357 GLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA----REYLIE---- 408
G + +L +EM +G P V YS + GLCR K + RE + E
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606
Query: 409 ----MKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLC 464
M+++G P+ TY+++++ A + + MK+ + + + Y+ILI+ LC
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666
Query: 465 KNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
G + +A + + + L AY+++I C + +KLF+Q+L
Sbjct: 667 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLL 717
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 178/375 (47%), Gaps = 13/375 (3%)
Query: 143 VLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLR 202
+L+ + + G AL ++ + K+ + P+ + +++VI LCK+G D A+ ++ + +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 203 NCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRA 262
P+S T+ L+ GLC++G + EA SLLD + G + ++N++I K G + A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 263 AKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHG 322
+L + G P+ T+N+L+ G C+ + +A +L+ + P+ V++ TL+
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 323 FVKQGRASDGASVLISLEERGHRGNEYIYSSLISGL------------FKEGKFEHAMQL 370
+ G + ++ G YS + GL +E FE Q
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 607
Query: 371 WKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFE 430
++M +G P+ + Y+ +I LCR A +L MK++ +S TY+ L+
Sbjct: 608 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 667
Query: 431 AGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVA 490
G KA ++ + + ++ Y+ LI C G A+ ++ Q+L RG + +
Sbjct: 668 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD 727
Query: 491 YSSMIHGFCNAQLVD 505
YS++I+ C L++
Sbjct: 728 YSAVINRLCRRHLMN 742
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 214/395 (54%), Gaps = 10/395 (2%)
Query: 142 SVLNVIIQ----EGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFR 197
+VL++ I+ +G+F + E + K I+P+ + F + I LCK G + +A V
Sbjct: 272 AVLSLFIRKYCSDGYFDKGWELLMGM-KHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLF 330
Query: 198 GIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKG 257
+ L + DS + S+++DG CK G+ +EA+ L+ ++ PN FV++ +S +C G
Sbjct: 331 KLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTG 387
Query: 258 DLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFG 317
D++RA+ + + G +P+ V Y T++DG C G+ +KA ++ + P+ T
Sbjct: 388 DMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTST 447
Query: 318 TLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEK 377
L+ + G SD SV +++ G + + Y++L+ G K + +L EM
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA 507
Query: 378 GCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKA 437
G P+ Y+ LI + G DEA E + E+ +G +P++ ++ ++ GF + GD +A
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 438 ILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHG 497
++W M + + V S L++G CK ++ +A++++ ++L G+K DVV Y+++IHG
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 498 FCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILL 532
+C+ +++ +L M+ + + P+ +T++ L+
Sbjct: 628 YCSVGDIEKACELIGLMV--QRGMLPNESTHHALV 660
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 190/421 (45%), Gaps = 14/421 (3%)
Query: 72 LIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEF 131
I K + F ELL MK F V KA F ++A ++ +++ F
Sbjct: 277 FIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKL-F 335
Query: 132 HCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQ 191
Q S +SV++ + G A++ + S ++PN ++ + +C G + +
Sbjct: 336 GISQDSVSVSSVIDGFCKVGKPEEAIK----LIHSFRLRPNIFVYSSFLSNICSTGDMLR 391
Query: 192 AVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLIS 251
A +F+ I PD Y+T++DG C GR D+A + G P+ +LI
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 252 ALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVP 311
A + G + A + NM +G + VTYN L+ G + +LNK L+++M + P
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511
Query: 312 NDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLW 371
+ T+ L+H V +G + ++ L RG + ++ +I G K G F+ A LW
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILW 571
Query: 372 KEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEA 431
M + +P+ V SAL+ G C+ + ++A ++ + G P+ Y++L+ G+
Sbjct: 572 FYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSV 631
Query: 432 GDCHKA-----ILVWKEMKNNSCNHNEVCYSI----LINGLCKNGKLMEAMMVWKQMLSR 482
GD KA ++V + M N H+ + + +N L+E ++V K L+
Sbjct: 632 GDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIVAKWHLTS 691
Query: 483 G 483
G
Sbjct: 692 G 692
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 194/442 (43%), Gaps = 23/442 (5%)
Query: 210 TYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNM 269
+S L+D +E +++ A+ L ++ G FP+ V L+ + + L A + V++M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 270 SLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRA 329
+G N + + C G +K LL M P+ V F + K G
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 330 SDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSAL 389
+ SVL L+ G + SS+I G K GK E A++L + PN VYS+
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSF 379
Query: 390 IDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSC 449
+ +C G A E+ G LP+ Y++++ G+ G KA + + +
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 450 NHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMK 509
+ +ILI + G + +A V++ M + G+KLDVV Y++++HG+ +++ +
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 510 LFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDP----------- 558
L ++M + A + PDVATYNIL+++ + I A ++++ ++ +G P
Sbjct: 500 LIDEM--RSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 559 -----DFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLL 613
DF I + D P L+ K QR A + +LD L
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVT--CSALLHGYCKAQRMEKAIVLFNKLLDAGLK 615
Query: 614 PEASTWAIVVQQLCKPRNIRKA 635
P+ + ++ C +I KA
Sbjct: 616 PDVVLYNTLIHGYCSVGDIEKA 637
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 5/212 (2%)
Query: 348 EYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLI 407
E ++S LI +E K A++L ++ + G P+ V +L+ + R + ARE++
Sbjct: 201 ETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVE 260
Query: 408 EMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNG 467
M ++G N+ S +R + G K + MK+ + V +++ I+ LCK G
Sbjct: 261 HMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG 320
Query: 468 KLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVAT 527
L EA V ++ GI D V+ SS+I GFC ++ +KL + L+P++
Sbjct: 321 FLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF-----RLRPNIFV 375
Query: 528 YNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
Y+ L+ ++ RA + + + G PD
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPD 407
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 214/395 (54%), Gaps = 10/395 (2%)
Query: 142 SVLNVIIQ----EGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFR 197
+VL++ I+ +G+F + E + K I+P+ + F + I LCK G + +A V
Sbjct: 272 AVLSLFIRKYCSDGYFDKGWELLMGM-KHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLF 330
Query: 198 GIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKG 257
+ L + DS + S+++DG CK G+ +EA+ L+ ++ PN FV++ +S +C G
Sbjct: 331 KLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTG 387
Query: 258 DLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFG 317
D++RA+ + + G +P+ V Y T++DG C G+ +KA ++ + P+ T
Sbjct: 388 DMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTST 447
Query: 318 TLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEK 377
L+ + G SD SV +++ G + + Y++L+ G K + +L EM
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA 507
Query: 378 GCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKA 437
G P+ Y+ LI + G DEA E + E+ +G +P++ ++ ++ GF + GD +A
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 438 ILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHG 497
++W M + + V S L++G CK ++ +A++++ ++L G+K DVV Y+++IHG
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 498 FCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILL 532
+C+ +++ +L M+ + + P+ +T++ L+
Sbjct: 628 YCSVGDIEKACELIGLMV--QRGMLPNESTHHALV 660
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 190/421 (45%), Gaps = 14/421 (3%)
Query: 72 LIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEF 131
I K + F ELL MK F V KA F ++A ++ +++ F
Sbjct: 277 FIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKL-F 335
Query: 132 HCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQ 191
Q S +SV++ + G A++ + S ++PN ++ + +C G + +
Sbjct: 336 GISQDSVSVSSVIDGFCKVGKPEEAIK----LIHSFRLRPNIFVYSSFLSNICSTGDMLR 391
Query: 192 AVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLIS 251
A +F+ I PD Y+T++DG C GR D+A + G P+ +LI
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 252 ALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVP 311
A + G + A + NM +G + VTYN L+ G + +LNK L+++M + P
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511
Query: 312 NDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLW 371
+ T+ L+H V +G + ++ L RG + ++ +I G K G F+ A LW
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILW 571
Query: 372 KEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEA 431
M + +P+ V SAL+ G C+ + ++A ++ + G P+ Y++L+ G+
Sbjct: 572 FYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSV 631
Query: 432 GDCHKA-----ILVWKEMKNNSCNHNEVCYSI----LINGLCKNGKLMEAMMVWKQMLSR 482
GD KA ++V + M N H+ + + +N L+E ++V K L+
Sbjct: 632 GDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIVAKWHLTS 691
Query: 483 G 483
G
Sbjct: 692 G 692
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 194/442 (43%), Gaps = 23/442 (5%)
Query: 210 TYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNM 269
+S L+D +E +++ A+ L ++ G FP+ V L+ + + L A + V++M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 270 SLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRA 329
+G N + + C G +K LL M P+ V F + K G
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 330 SDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSAL 389
+ SVL L+ G + SS+I G K GK E A++L + PN VYS+
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSF 379
Query: 390 IDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSC 449
+ +C G A E+ G LP+ Y++++ G+ G KA + + +
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 450 NHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMK 509
+ +ILI + G + +A V++ M + G+KLDVV Y++++HG+ +++ +
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 510 LFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDP----------- 558
L ++M + A + PDVATYNIL+++ + I A ++++ ++ +G P
Sbjct: 500 LIDEM--RSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 559 -----DFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLL 613
DF I + D P L+ K QR A + +LD L
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVT--CSALLHGYCKAQRMEKAIVLFNKLLDAGLK 615
Query: 614 PEASTWAIVVQQLCKPRNIRKA 635
P+ + ++ C +I KA
Sbjct: 616 PDVVLYNTLIHGYCSVGDIEKA 637
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 5/212 (2%)
Query: 348 EYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLI 407
E ++S LI +E K A++L ++ + G P+ V +L+ + R + ARE++
Sbjct: 201 ETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVE 260
Query: 408 EMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNG 467
M ++G N+ S +R + G K + MK+ + V +++ I+ LCK G
Sbjct: 261 HMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG 320
Query: 468 KLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVAT 527
L EA V ++ GI D V+ SS+I GFC ++ +KL + L+P++
Sbjct: 321 FLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF-----RLRPNIFV 375
Query: 528 YNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
Y+ L+ ++ RA + + + G PD
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPD 407
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 150/578 (25%), Positives = 268/578 (46%), Gaps = 98/578 (16%)
Query: 148 IQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPD 207
++E A++ + V S +P+GL F+L ++A CK + A+++ R + + P
Sbjct: 250 LRERKPEEAVKIFRRVM-SRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPA 308
Query: 208 SY-TYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV 266
S TY++++ KEG ++EAV ++DEM G + L++ CK +L +A L
Sbjct: 309 SQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLF 368
Query: 267 DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHG---- 322
+ M +G P++V ++ +V+ C+ ++ KA+ +M + + P+ V T++ G
Sbjct: 369 NRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKA 428
Query: 323 ------------------------------FVKQGRASDGASVLISLEERGHRGNEYIYS 352
F KQG+ S L +E++G N Y+
Sbjct: 429 ESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYN 488
Query: 353 SLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDG-------------------- 392
+++ + + A ++ EM+EKG EPN YS LIDG
Sbjct: 489 NMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNAS 548
Query: 393 ---------------LCREGKADEAREYLIEM-KNKGHLPNSFTYSSLMRGFFEAGDCHK 436
LC+ G+ +A+E L + K K + + +Y+S++ GF + GD
Sbjct: 549 NFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDS 608
Query: 437 AILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIH 496
A+ ++EM N + N V ++ LING CK+ ++ A+ + +M S +KLD+ AY ++I
Sbjct: 609 AVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALID 668
Query: 497 GFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGC 556
GFC + LF+++ E L P+V+ YN L++ F + A+D+ M++ G
Sbjct: 669 GFCKKNDMKTAYTLFSEL--PELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDG- 725
Query: 557 DPDFITCDIFLKT------LRD-NMNPPQD-GREFLD-----------ELVVRLVKRQRT 597
I+CD+F T L+D N+N D E LD LV L K+ +
Sbjct: 726 ----ISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQF 781
Query: 598 IGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKA 635
+ ASK++E M + + P ++ V+ + N+ +A
Sbjct: 782 LKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEA 819
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 227/484 (46%), Gaps = 39/484 (8%)
Query: 107 IFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKS 166
+ Y K + KA++LF+RME E V F+ ++ + +A+EFY + KS
Sbjct: 351 LVNGYCKGNELGKALDLFNRMEEEGLAPDKVM-FSVMVEWFCKNMEMEKAIEFYMRM-KS 408
Query: 167 LNIQPNGLTFNLVIKA----------------------------------LCKVGLVDQA 192
+ I P+ + + +I+ CK G VD A
Sbjct: 409 VRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAA 468
Query: 193 VEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISA 252
+ + + P+ Y+ +M C+ +D A S+ EM +G PN F +++LI
Sbjct: 469 TSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDG 528
Query: 253 LCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPN 312
K D A +++ M+ NEV YNT+++GLC+ G+ +KA +L ++ K
Sbjct: 529 FFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSM 588
Query: 313 DVT-FGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLW 371
T + +++ GFVK G + E G N ++SLI+G K + + A+++
Sbjct: 589 SCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMT 648
Query: 372 KEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEA 431
EM + + Y ALIDG C++ A E+ G +PN Y+SL+ GF
Sbjct: 649 HEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNL 708
Query: 432 GDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAY 491
G AI ++K+M N+ + + Y+ +I+GL K+G + A ++ ++L GI D + +
Sbjct: 709 GKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILH 768
Query: 492 SSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIM 551
+++G + K+ +M ++ ++ P+V Y+ ++ +++ N++ A + + M
Sbjct: 769 MVLVNGLSKKGQFLKASKMLEEM--KKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEM 826
Query: 552 LDQG 555
L++G
Sbjct: 827 LEKG 830
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 197/426 (46%), Gaps = 49/426 (11%)
Query: 113 KAHFPEKAVNLFHR-----MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSL 167
KA PE A+ +F+ + F C N + + ++G A F + +
Sbjct: 427 KAESPEAALEIFNDSFESWIAHGFMC-------NKIFLLFCKQGKVDAATSFLK-MMEQK 478
Query: 168 NIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEA 227
I+PN + +N ++ A C++ +D A +F + + P+++TYS L+DG K A
Sbjct: 479 GIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNA 538
Query: 228 VSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDN------------------- 268
++++M N ++N +I+ LCK G +A +++ N
Sbjct: 539 WDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIID 598
Query: 269 -----------------MSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVP 311
MS G PN VT+ +L++G C+ +++ A+ + ++M + +
Sbjct: 599 GFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKL 658
Query: 312 NDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLW 371
+ +G L+ GF K+ ++ L E G N +Y+SLISG GK + A+ L+
Sbjct: 659 DLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLY 718
Query: 372 KEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEA 431
K+M+ G + Y+ +IDGL ++G + A + E+ + G +P+ + L+ G +
Sbjct: 719 KKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKK 778
Query: 432 GDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAY 491
G KA + +EMK N + YS +I G + G L EA + +ML +GI D +
Sbjct: 779 GQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVF 838
Query: 492 SSMIHG 497
+ ++ G
Sbjct: 839 NLLVSG 844
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 184/373 (49%), Gaps = 17/373 (4%)
Query: 89 LQQMKRERRVFIE--------KNFI--VIFKAYGKAHFPEKAVNLFHRMEAE-FHCKQTV 137
++ M R +F E NF ++ + K + A ++ ++M A F + +
Sbjct: 497 MKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVI 556
Query: 138 KSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFR 197
+N+++N + + G +A E ++ K + ++N +I KVG D AVE +R
Sbjct: 557 --YNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYR 614
Query: 198 GIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQ-IEGTFPNPFVFNVLISALCKK 256
+ +P+ T+++L++G CK R+D A+ + EM+ +E P + LI CKK
Sbjct: 615 EMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLP-AYGALIDGFCKK 673
Query: 257 GDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTF 316
D+ A L + G +PN YN+L+ G GK++ A+ L +MV + + T+
Sbjct: 674 NDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTY 733
Query: 317 GTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMME 376
T++ G +K G + + + L + G +E ++ L++GL K+G+F A ++ +EM +
Sbjct: 734 TTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKK 793
Query: 377 KGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHK 436
K PN ++YS +I G REG +EA EM KG + + ++ L+ G E
Sbjct: 794 KDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEKPPAAS 853
Query: 437 AI--LVWKEMKNN 447
I L EM+++
Sbjct: 854 KISSLASPEMRSS 866
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 145/286 (50%), Gaps = 2/286 (0%)
Query: 58 KWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFP 117
K Y + S+ S+I+ D S E ++M + F + + K++
Sbjct: 582 KEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRM 641
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+ A+ + H M++ K + ++ ++++ ++ A +S + + L + PN +N
Sbjct: 642 DLALEMTHEMKS-MELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPE-LGLMPNVSVYN 699
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
+I +G +D A+++++ + + D +TY+T++DGL K+G I+ A L E+
Sbjct: 700 SLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDL 759
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G P+ + VL++ L KKG ++A+K+++ M K PN + Y+T++ G R+G LN+A
Sbjct: 760 GIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEA 819
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERG 343
L ++M+ V +D F LV G V++ A+ S L S E R
Sbjct: 820 FRLHDEMLEKGIVHDDTVFNLLVSGRVEKPPAASKISSLASPEMRS 865
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 99/466 (21%), Positives = 193/466 (41%), Gaps = 75/466 (16%)
Query: 103 NFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSH 162
N +V+F + P VN F + T ++FN +LN I+ A++ +
Sbjct: 135 NLLVMFVSNNPTLIPNVMVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGL 194
Query: 163 VCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEG 222
+ + P N V+ +L + L+D+A E++ + L A D+ T LM +E
Sbjct: 195 MVDR-KVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRER 253
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
+ +EAV +F ++S +G P+ + ++
Sbjct: 254 KPEEAVK---------------IFRRVMS--------------------RGAEPDGLLFS 278
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCVP-NDVTFGTLVHGFVKQGRASDGASVLISLEE 341
V C+ L A+ LL +M VP + T+ +++ FVK+G + V+ +
Sbjct: 279 LAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVG 338
Query: 342 RGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADE 401
G + +SL++G K + A+ L+ M E+G P+ V++S +++ C+ + ++
Sbjct: 339 FGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEK 398
Query: 402 AREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILIN 461
A E+ + MK+ P+S ++++G +A A+ ++ + + H +C I +
Sbjct: 399 AIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFL- 457
Query: 462 GLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAEL 521
CK GK+ A K M +GI
Sbjct: 458 LFCKQGKVDAATSFLKMMEQKGI------------------------------------- 480
Query: 522 QPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
+P+V YN ++ A + N+ A + + ML++G +P+ T I +
Sbjct: 481 EPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILI 526
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 219/469 (46%), Gaps = 24/469 (5%)
Query: 169 IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAV 228
+ P+ +T N V++ ++GL++ A VF + +R PDS +Y ++ G ++G+I EA
Sbjct: 178 LTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEAD 237
Query: 229 SLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGL 288
L M G P+ ++++ALC+ G + RA M G PN + + +L+DGL
Sbjct: 238 RWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGL 297
Query: 289 CRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISL-EERGHRGN 347
C+KG + +A +L +MV N PN T L+ G K+G + + L ++ N
Sbjct: 298 CKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPN 357
Query: 348 EYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLI 407
+ Y+S+I G KE K A L+ M E+G PN Y+ LI+G C+ G A E +
Sbjct: 358 VHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMN 417
Query: 408 EMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNG 467
M ++G +PN +TY++ + + +A + + + + V Y+ILI CK
Sbjct: 418 LMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQN 477
Query: 468 KLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVAT 527
+ +A+ + +M G + D+ + +I FC + + + +LF L L P T
Sbjct: 478 DINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQ--LVVSLGLIPTKET 535
Query: 528 YNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDEL 587
Y +++ + ++ +I A+ + M GC PD T L
Sbjct: 536 YTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFT---------------------YGSL 574
Query: 588 VVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
+ L K+ A K+ E M+DR L P T + + CK + A+
Sbjct: 575 ISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAM 623
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 216/455 (47%), Gaps = 19/455 (4%)
Query: 89 LQQMKRERRVFIEKNFI-------VIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFN 141
+Q+ R I++ FI +I A + +A+ F +M + K + +F
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKM-IDLGFKPNLINFT 291
Query: 142 SVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVF-RGIH 200
S+++ + ++G +A E + ++ +PN T +I LCK G ++A +F + +
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRN-GWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVR 350
Query: 201 LRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLI 260
P+ +TY++++ G CKE +++ A L M+ +G FPN + LI+ CK G
Sbjct: 351 SDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFG 410
Query: 261 RAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLV 320
RA +L++ M +G +PN TYN +D LC+K + +A LLN+ + + VT+ L+
Sbjct: 411 RAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILI 470
Query: 321 HGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCE 380
KQ + + + + G + + + LI+ ++ K + + +L++ ++ G
Sbjct: 471 QEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLI 530
Query: 381 PNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILV 440
P Y+++I C+EG D A +Y MK G +P+SFTY SL+ G + +A +
Sbjct: 531 PTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKL 590
Query: 441 WKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCN 500
++ M + + EV L CK AM++ + + KL + +++ C+
Sbjct: 591 YEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPL---DKKLWIRTVRTLVRKLCS 647
Query: 501 AQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAF 535
+ V F ++ L+ D + + L AF
Sbjct: 648 EKKVGVAALFFQKL------LEKDSSADRVTLAAF 676
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 199/416 (47%), Gaps = 24/416 (5%)
Query: 222 GRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTY 281
GR++EAV ++ +MQ +G P+ N ++ + G + A + D MS++G VP+ +Y
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 282 NTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEE 341
+V G R GK+ +A L M+ +P++ T ++ + G + + +
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280
Query: 342 RGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADE 401
G + N ++SLI GL K+G + A ++ +EM+ G +PN ++ALIDGLC+ G ++
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 340
Query: 402 A-REYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILI 460
A R +L +++ + PN TY+S++ G+ + ++A +++ MK N Y+ LI
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400
Query: 461 NGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAE 520
NG CK G A + M G ++ Y++ I C + +L N+
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF--SCG 458
Query: 521 LQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDG 580
L+ D TY IL+ +QN+I++A+ M G + D +I
Sbjct: 459 LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNI--------------- 503
Query: 581 REFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
L+ ++++ + ++ ++++ L+P T+ ++ CK +I A+
Sbjct: 504 ------LIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLAL 553
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 184/432 (42%), Gaps = 39/432 (9%)
Query: 62 YKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAV 121
+K ++F SLI+ L E+L++M R
Sbjct: 283 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN-------------------------- 316
Query: 122 NLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIK 181
K V + ++++ + + G +A + + +S +PN T+ +I
Sbjct: 317 ----------GWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIG 366
Query: 182 ALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFP 241
CK +++A +F + + P+ TY+TL++G CK G A L++ M EG P
Sbjct: 367 GYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMP 426
Query: 242 NPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLL 301
N + +N I +LCKK A +L++ G + VTY L+ C++ +N+A++
Sbjct: 427 NIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFF 486
Query: 302 NQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKE 361
+M + L+ F +Q + + + + G + Y+S+IS KE
Sbjct: 487 CRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKE 546
Query: 362 GKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTY 421
G + A++ + M GC P++ Y +LI GLC++ DEA + M ++G P T
Sbjct: 547 GDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTR 606
Query: 422 SSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLS 481
+L + + D A+++ + + L+ LC K+ A + ++++L
Sbjct: 607 VTLAYEYCKRNDSANAMILLEPLDKKLWIRT---VRTLVRKLCSEKKVGVAALFFQKLLE 663
Query: 482 RGIKLDVVAYSS 493
+ D V ++
Sbjct: 664 KDSSADRVTLAA 675
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 174/374 (46%), Gaps = 36/374 (9%)
Query: 281 YNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLE 340
Y D L G L KA ++ M+ N F + GR ++ +++ ++
Sbjct: 130 YLVTADSLLANGNLQKAHEVMRCMLRN---------------FSEIGRLNEAVGMVMDMQ 174
Query: 341 ERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
+G + + ++ + G E+A ++ EM +G P++ Y ++ G R+GK
Sbjct: 175 NQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQ 234
Query: 401 EAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILI 460
EA +L M +G +P++ T + ++ E G ++AI +++M + N + ++ LI
Sbjct: 235 EADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLI 294
Query: 461 NGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAE 520
+GLCK G + +A + ++M+ G K +V ++++I G C ++ +LF + L +
Sbjct: 295 DGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLK-LVRSDT 353
Query: 521 LQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDG 580
+P+V TY ++ + +++ ++RA + + M +QG P+ T + + + G
Sbjct: 354 YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT---YTTLINGHCKAGSFG 410
Query: 581 REF-----------------LDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVV 623
R + + + L K+ R A +++ L + T+ I++
Sbjct: 411 RAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILI 470
Query: 624 QQLCKPRNIRKAIS 637
Q+ CK +I +A++
Sbjct: 471 QEQCKQNDINQALA 484
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 186/339 (54%), Gaps = 3/339 (0%)
Query: 176 FNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEG-RIDEAVSLLDEM 234
F+ +I A + GL ++A+ VF + P+ TY+ ++D K G + DEM
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 235 QIEGTFPNPFVFNVLISALCKKGDLIRAAK-LVDNMSLKGCVPNEVTYNTLVDGLCRKGK 293
Q G P+ FN L+ A+C +G L AA+ L D M+ + + +YNTL+D +C+ G+
Sbjct: 331 QRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 294 LNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSS 353
++ A +L QM + +PN V++ T++ GF K GR + ++ + G + Y++
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 354 LISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKG 413
L+S K G+ E A+ + +EM G + + V Y+AL+ G ++GK DE ++ EMK +
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 414 HLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAM 473
LPN TYS+L+ G+ + G +A+ +++E K+ + V YS LI+ LCKNG + A+
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAV 569
Query: 474 MVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFN 512
+ +M GI +VV Y+S+I F + +D+ N
Sbjct: 570 SLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSN 608
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 174/326 (53%), Gaps = 3/326 (0%)
Query: 104 FIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEG-HFHRALEFYSH 162
F + AYG++ E+A+++F+ M+ E+ + + ++N+V++ + G F + +F+
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMK-EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 163 VCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEG 222
+ ++ +QP+ +TFN ++ + GL + A +F + R D ++Y+TL+D +CK G
Sbjct: 330 MQRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
++D A +L +M ++ PN ++ +I K G A L M G + V+YN
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER 342
TL+ + G+ +A+ +L +M + + VT+ L+ G+ KQG+ + V ++
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Query: 343 GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
N YS+LI G K G ++ AM++++E G + V+YSALID LC+ G A
Sbjct: 509 HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSA 568
Query: 403 REYLIEMKNKGHLPNSFTYSSLMRGF 428
+ EM +G PN TY+S++ F
Sbjct: 569 VSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 169/362 (46%), Gaps = 42/362 (11%)
Query: 212 STLMDGLCKEGRIDEAVSLLDEMQIEGTFPNP-FVFNVLISALCKKGDLIRAAKLVDNMS 270
S ++ L + G++ A + E G + N + F+ LISA + G A + ++M
Sbjct: 237 SAMISTLGRYGKVTIAKRIF-ETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMK 295
Query: 271 LKGCVPNEVTYNTLVDGLCRKG--KLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGR 328
G PN VTYN ++D C KG + + ++M N P+ +TF +L
Sbjct: 296 EYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSL--------- 345
Query: 329 ASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSA 388
+++ RG G +E A L+ EM + E + Y+
Sbjct: 346 --------LAVCSRG------------------GLWEAARNLFDEMTNRRIEQDVFSYNT 379
Query: 389 LIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNS 448
L+D +C+ G+ D A E L +M K +PN +YS+++ GF +AG +A+ ++ EM+
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 449 CNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGM 508
+ V Y+ L++ K G+ EA+ + ++M S GIK DVV Y++++ G+ D+
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 509 KLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLK 568
K+F +M + + P++ TY+ L++ + + AM++ G D + +
Sbjct: 500 KVFTEM--KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557
Query: 569 TL 570
L
Sbjct: 558 AL 559
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 119/236 (50%), Gaps = 2/236 (0%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
S+ +L++ + E+L QM +R + ++ + + KA ++A+NLF
Sbjct: 375 FSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGE 434
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
M V S+N++L++ + G AL+ + S+ I+ + +T+N ++ K
Sbjct: 435 MRYLGIALDRV-SYNTLLSIYTKVGRSEEALDILREMA-SVGIKKDVVTYNALLGGYGKQ 492
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
G D+ +VF + + P+ TYSTL+DG K G EA+ + E + G + ++
Sbjct: 493 GKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLY 552
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLN 302
+ LI ALCK G + A L+D M+ +G PN VTYN+++D R ++++ N
Sbjct: 553 SALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSN 608
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 186/349 (53%), Gaps = 17/349 (4%)
Query: 206 PDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKL 265
PD T S+L++G C I +AV + +M+ G + V +LI LCK ++ A ++
Sbjct: 11 PDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEV 70
Query: 266 VDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVK 325
+ M +G PN VTY++L+ GLC+ G+L A L++M + K PN +TF L+ + K
Sbjct: 71 LKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAK 130
Query: 326 QGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVV 385
+G+ S SV + + N + YSSLI GL + + A+++ M+ KGC PN V
Sbjct: 131 RGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVT 190
Query: 386 YSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMK 445
YS L +G + + D+ + L +M +G N+ + ++L++G+F+AG A+ V+ M
Sbjct: 191 YSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMT 250
Query: 446 NNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVD 505
+N N Y+I++ GL NG++ +A+ ++ M LD++ Y+ MIHG C A +V
Sbjct: 251 SNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVK 310
Query: 506 QGMKLFNQMLCQEAELQPDVATYNIL---------------LNAFYQQN 539
+ LF ++ + E PD Y I+ LN FYQ++
Sbjct: 311 EAYDLFYKLKFKRVE--PDFKAYTIMIAELNRAGMRTEADALNRFYQKH 357
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 160/345 (46%), Gaps = 5/345 (1%)
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G P+ + L++ C + A + M G + V L+D LC+ + A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
+ +L +M PN VT+ +L+ G K GR +D L ++ + N +S+LI
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
K GK ++K M++ +PN YS+LI GLC + DEA + L M +KG PN
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
TYS+L GFF++ I + +M N V + LI G + GK+ A+ V+
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 247
Query: 478 QMLSRGIKLDVVAYSSMIHG-FCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFY 536
M S G+ ++ +Y+ ++ G F N + V++ + F M Q+ D+ TY I+++
Sbjct: 248 YMTSNGLIPNIRSYNIVLAGLFANGE-VEKALSRFEHM--QKTRNDLDIITYTIMIHGMC 304
Query: 537 QQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL-RDNMNPPQDG 580
+ + A D+ + + +PDF I + L R M D
Sbjct: 305 KACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADA 349
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 152/314 (48%), Gaps = 5/314 (1%)
Query: 89 LQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVII 148
+++M +R V ++ ++ K A+ + RM+ + V +++S++ +
Sbjct: 39 MEKMGIKRDVVVDT---ILIDTLCKNRLVVPALEVLKRMK-DRGISPNVVTYSSLITGLC 94
Query: 149 QEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDS 208
+ G A E H S I PN +TF+ +I A K G + + V++ + + P+
Sbjct: 95 KSGRLADA-ERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNV 153
Query: 209 YTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDN 268
+TYS+L+ GLC R+DEA+ +LD M +G PN ++ L + K + KL+D+
Sbjct: 154 FTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDD 213
Query: 269 MSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGR 328
M +G N V+ NTL+ G + GK++ A+ + M +N +PN ++ ++ G G
Sbjct: 214 MPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGE 273
Query: 329 ASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSA 388
S +++ + + Y+ +I G+ K + A L+ ++ K EP+ Y+
Sbjct: 274 VEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTI 333
Query: 389 LIDGLCREGKADEA 402
+I L R G EA
Sbjct: 334 MIAELNRAGMRTEA 347
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 37/231 (16%)
Query: 373 EMMEKGCEPNTVVYSALIDGLC---------------------REGKADE---------- 401
+MM+ G EP+ V S+L++G C R+ D
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 402 ----AREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYS 457
A E L MK++G PN TYSSL+ G ++G A EM + N N + +S
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 458 ILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQ 517
LI+ K GKL + V+K M+ I +V YSS+I+G C VD+ +K+ + M+ +
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 518 EAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLK 568
P+V TY+ L N F++ + + + +L+ M +G + ++C+ +K
Sbjct: 183 GC--TPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIK 231
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 106/231 (45%), Gaps = 23/231 (9%)
Query: 406 LIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCK 465
+++M G P+ T SSL+ GF + A+ V +M+ + V +ILI+ LCK
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 466 NGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDV 525
N ++ A+ V K+M RGI +VV YSS+I G C + + + ++M ++ P+V
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEM--DSKKINPNV 118
Query: 526 ATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLD 585
T++ L++A+ ++ +S+ V +M+ DP+ T
Sbjct: 119 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFT---------------------YS 157
Query: 586 ELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
L+ L R A K++++M+ + P T++ + K + I
Sbjct: 158 SLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGI 208
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 211/419 (50%), Gaps = 3/419 (0%)
Query: 153 FHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYS 212
F+ AL + + +S + P+ + F+ ++ A+ K+ + + +FR + + + D Y+++
Sbjct: 60 FNDALTLFCDMAESHPL-PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 213 TLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLK 272
TL+D C+ R+ A+S L +M G P+ F L++ C A LVD +
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 273 GCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDG 332
G PN V YNT++D LC KG++N A+ +L M P+ VT+ +L+ G
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 333 ASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDG 392
A +L + G + +S+LI KEG+ A + + EM+++ PN V Y++LI+G
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 393 LCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHN 452
LC G DEA++ L + +KG PN+ TY++L+ G+ +A + + M + + +
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGD 358
Query: 453 EVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFN 512
Y+ L G C+ GK A V +M+S G+ D+ ++ ++ G C+ + + +
Sbjct: 359 TFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLE 418
Query: 513 QMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLR 571
+ Q+++ + TYNI++ + + + A + + +G PD IT + LR
Sbjct: 419 DL--QKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLR 475
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 205/422 (48%), Gaps = 27/422 (6%)
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
+ ++A++L +M P+ F+ L+ A+ K L ++ + G + ++
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER 342
TL+D CR +L+ A+S L +M+ P+ VTFG+LV+GF R + S++ +
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 343 GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
G+ N IY+++I L ++G+ A+ + K M + G P+ V Y++LI L G +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 403 REYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILING 462
L +M G P+ T+S+L+ + + G +A + EM S N N V Y+ LING
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 463 LCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQ 522
LC +G L EA V ++S+G + V Y+++I+G+C A+ VD GMK+ M +
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVM--SRDGVD 356
Query: 523 PDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGRE 582
D TYN L + Q S A VL M+ G PD T +I L L D+ G+
Sbjct: 357 GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDH------GK- 409
Query: 583 FLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAISECWSR 642
+ + +VRL Q++ II T+ I+++ LCK + A W
Sbjct: 410 -IGKALVRLEDLQKSKTVVGII-------------TYNIIIKGLCKADKVEDA----WYL 451
Query: 643 LC 644
C
Sbjct: 452 FC 453
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 211/421 (50%), Gaps = 3/421 (0%)
Query: 103 NFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSH 162
+F + A K + E ++LF +E + SF ++++ + AL
Sbjct: 81 DFSRLLIAIAKLNKYEAVISLFRHLEM-LGISHDLYSFTTLIDCFCRCARLSLALSCLGK 139
Query: 163 VCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEG 222
+ K L +P+ +TF ++ C V +A+ + I P+ Y+T++D LC++G
Sbjct: 140 MMK-LGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKG 198
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
+++ A+ +L M+ G P+ +N LI+ L G +A+++ +M G P+ +T++
Sbjct: 199 QVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFS 258
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER 342
L+D ++G+L +A N+M+ PN VT+ +L++G G + VL L +
Sbjct: 259 ALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSK 318
Query: 343 GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
G N Y++LI+G K + + M++ M G + +T Y+ L G C+ GK A
Sbjct: 319 GFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAA 378
Query: 403 REYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILING 462
+ L M + G P+ +T++ L+ G + G KA++ ++++ + + Y+I+I G
Sbjct: 379 EKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKG 438
Query: 463 LCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQ 522
LCK K+ +A ++ + +G+ DV+ Y +M+ G +L + +L+ +M +E L
Sbjct: 439 LCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQ-KEDGLM 497
Query: 523 P 523
P
Sbjct: 498 P 498
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 209/414 (50%), Gaps = 2/414 (0%)
Query: 101 EKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFY 160
E++ IV A K + + +F RM + K TV S V+ + + G ++ +
Sbjct: 189 ERSCIVFLVAAKKRRRIDLCLEIFRRM-VDSGVKITVYSLTIVVEGLCRRGEVEKSKKLI 247
Query: 161 SHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCK 220
I+P T+N +I A K V + + + TY+ LM+ K
Sbjct: 248 KEFSVK-GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVK 306
Query: 221 EGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVT 280
G++ +A L DEM+ G + V+ LIS C+KG++ RA L D ++ KG P+ T
Sbjct: 307 NGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYT 366
Query: 281 YNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLE 340
Y L+DG+C+ G++ A L+N+M + V F TL+ G+ ++G + + + +E
Sbjct: 367 YGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVME 426
Query: 341 ERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
++G + + + +++ S + +++ A Q MME G + +TV Y+ LID C+EG +
Sbjct: 427 QKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVE 486
Query: 401 EAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILI 460
EA+ +EM +KG PN+ TY+ ++ + + G +A + M+ N + + Y+ LI
Sbjct: 487 EAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI 546
Query: 461 NGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
+G C + EAM ++ +M +G+ + V Y+ MI G A D+ L+++M
Sbjct: 547 HGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 195/358 (54%), Gaps = 3/358 (0%)
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRG 198
++N+++N +++ F +E V K + N +T+ L+++ K G + A ++F
Sbjct: 261 TYNTIINAYVKQRDFS-GVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDE 319
Query: 199 IHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGD 258
+ R D + Y++L+ C++G + A L DE+ +G P+ + + LI +CK G+
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE 379
Query: 259 LIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDV-TFG 317
+ A L++ M KG +V +NTL+DG CRKG +++A S++ ++ K DV T
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEA-SMIYDVMEQKGFQADVFTCN 438
Query: 318 TLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEK 377
T+ F + R + L + E G + + Y++LI KEG E A +L+ EM K
Sbjct: 439 TIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK 498
Query: 378 GCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKA 437
G +PN + Y+ +I C++GK EAR+ M+ G P+S+TY+SL+ G A + +A
Sbjct: 499 GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEA 558
Query: 438 ILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
+ ++ EM + N V Y+++I+GL K GK EA ++ +M +G +D Y+++I
Sbjct: 559 MRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 215/454 (47%), Gaps = 25/454 (5%)
Query: 121 VNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTF---- 176
V L HR+ + + S+LN ++ +G + R +E +I F
Sbjct: 101 VTLSHRL----YSNRRFNEMRSLLNSVVNDGFYKRPVEELGSAMVDCDISEEKFEFFEKF 156
Query: 177 -NLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQ 235
+LV + G+ ++ + VF + + + D + + K RID + + M
Sbjct: 157 FDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMV 216
Query: 236 IEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLN 295
G + +++ LC++G++ ++ KL+ S+KG P TYNT+++ ++ +
Sbjct: 217 DSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFS 276
Query: 296 KAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLI 355
+L M + V N VT+ L+ VK G+ SD + + ERG + ++Y+SLI
Sbjct: 277 GVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLI 336
Query: 356 SGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL 415
S ++G + A L+ E+ EKG P++ Y ALIDG+C+ G+ A + EM++KG
Sbjct: 337 SWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVN 396
Query: 416 PNSFTYSSLMRGFFEAGDCHKAILVWKEMKNN-------SCNHNEVCYSILINGLCKNGK 468
+++L+ G+ G +A +++ M+ +CN C++ L +
Sbjct: 397 ITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRL-------KR 449
Query: 469 LMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATY 528
EA +M+ G+KL V+Y+++I +C V++ +LF +M +QP+ TY
Sbjct: 450 YDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEM--SSKGVQPNAITY 507
Query: 529 NILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
N+++ A+ +Q I A + M G DPD T
Sbjct: 508 NVMIYAYCKQGKIKEARKLRANMEANGMDPDSYT 541
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 180/358 (50%), Gaps = 2/358 (0%)
Query: 68 SFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRM 127
++ ++I DF+ +E +L+ MK++ V+ + + ++ + K A LF M
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 128 EAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVG 187
E + V + S+++ ++G+ RA + + + + P+ T+ +I +CKVG
Sbjct: 321 R-ERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEK-GLSPSSYTYGALIDGVCKVG 378
Query: 188 LVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFN 247
+ A + + + ++TL+DG C++G +DEA + D M+ +G + F N
Sbjct: 379 EMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCN 438
Query: 248 VLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVAN 307
+ S + A + + M G + V+Y L+D C++G + +A L +M +
Sbjct: 439 TIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK 498
Query: 308 KCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHA 367
PN +T+ +++ + KQG+ + + ++E G + Y Y+SLI G + A
Sbjct: 499 GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEA 558
Query: 368 MQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
M+L+ EM KG + N+V Y+ +I GL + GK+DEA EMK KG+ ++ Y++L+
Sbjct: 559 MRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 77/169 (45%), Gaps = 18/169 (10%)
Query: 475 VWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNA 534
++++M+ G+K+ V + + ++ G C V++ KL + + ++P+ TYN ++NA
Sbjct: 211 IFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKG--IKPEAYTYNTIINA 268
Query: 535 FYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKR 594
+ +Q + S VL +M G + +T + ++ N D + DE+ R ++
Sbjct: 269 YVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKN-GKMSDAEKLFDEMRERGIES 327
Query: 595 QRTIGASKI---------------IEVMLDRCLLPEASTWAIVVQQLCK 628
+ S I + + ++ L P + T+ ++ +CK
Sbjct: 328 DVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCK 376
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/486 (26%), Positives = 235/486 (48%), Gaps = 32/486 (6%)
Query: 88 LLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVI 147
L ++MKR V + ++ ++ KA E+A F+ M E C V ++ ++++
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR-EVGCTPNVVTYTALIHAY 563
Query: 148 IQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCA-- 205
++ A E + + S PN +T++ +I CK G V++A ++F R C
Sbjct: 564 LKAKKVSYANELFETML-SEGCLPNIVTYSALIDGHCKAGQVEKACQIFE----RMCGSK 618
Query: 206 ------------------PDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFN 247
P+ TY L+DG CK R++EA LLD M +EG PN V++
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 248 VLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVAN 307
LI LCK G L A ++ MS G TY++L+D + + + A +L++M+ N
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738
Query: 308 KCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHA 367
C PN V + ++ G K G+ + ++ +EE+G + N Y+++I G GK E
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 798
Query: 368 MQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRG 427
++L + M KG PN V Y LID C+ G D A L EMK ++ Y ++ G
Sbjct: 799 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG 858
Query: 428 FFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKL- 486
F + + +++ + E+ + Y +LI+ L K +L A+ + +++ + L
Sbjct: 859 FNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLV 916
Query: 487 -DVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAM 545
Y+S+I C A V+ +LF++M + + P++ ++ L+ ++ + IS A+
Sbjct: 917 DYSSTYNSLIESLCLANKVETAFQLFSEM--TKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Query: 546 DVLNIM 551
+L+ +
Sbjct: 975 LLLDFI 980
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 212/452 (46%), Gaps = 12/452 (2%)
Query: 117 PEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTF 176
P ++ F + K T +N+++++I+++ EF + + + + G
Sbjct: 145 PSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQI-RDDDKEVFGEFL 203
Query: 177 NLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQI 236
N++++ C+ G A+E + P TY+ L+ K R+D A + EM +
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 237 EGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNK 296
+ F +LCK G A LV+ + VP+ V Y L+ GLC +
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENF---VPDTVFYTKLISGLCEASLFEE 320
Query: 297 AVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLIS 356
A+ LN+M A C+PN VT+ TL+ G + + + VL + G + I++SL+
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 357 GLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKA------DEAREYLIEMK 410
G +A +L K+M++ G P VVY+ LI +C + + D A + EM
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
G + N SS R AG KA V +EM + YS ++N LC K+
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500
Query: 471 EAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNI 530
A +++++M G+ DV Y+ M+ FC A L++Q K FN+M +E P+V TY
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM--REVGCTPNVVTYTA 558
Query: 531 LLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
L++A+ + +S A ++ ML +GC P+ +T
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVT 590
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 142/583 (24%), Positives = 242/583 (41%), Gaps = 99/583 (16%)
Query: 72 LIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEF 131
L+ K + F+ E L ++K R + + +A+ KA + A +L HR +
Sbjct: 206 LVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSA-SLIHREMSLA 264
Query: 132 HCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQ 191
+ + + + + G + AL + ++ N P+ + + +I LC+ L ++
Sbjct: 265 NLRMDGFTLRCFAYSLCKVGKWREALT----LVETENFVPDTVFYTKLISGLCEASLFEE 320
Query: 192 AVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLIS 251
A++ + +C P+ TYSTL+ G + ++ +L+ M +EG +P+P +FN L+
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 252 ALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDG------------------------ 287
A C GD A KL+ M G +P V YN L+
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440
Query: 288 -----------------LCRKGKLNKAVSLLNQMVANKCVPN------------------ 312
LC GK KA S++ +M+ +P+
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500
Query: 313 ----------------DV-TFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLI 355
DV T+ +V F K G + E G N Y++LI
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Query: 356 SGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE----------- 404
K K +A +L++ M+ +GC PN V YSALIDG C+ G+ ++A +
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 620
Query: 405 -----YLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSIL 459
Y + + PN TY +L+ GF ++ +A + M C N++ Y L
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680
Query: 460 INGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEA 519
I+GLCK GKL EA V +M G + YSS+I + + D K+ ++ML E
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML--EN 738
Query: 520 ELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
P+V Y +++ + A ++ +M ++GC P+ +T
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 781
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 206/457 (45%), Gaps = 25/457 (5%)
Query: 133 CKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALC------KV 186
C + K FNS+++ G A + + K ++ P + +N++I ++C
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM-PGYVVYNILIGSICGDKDSLNC 426
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
L+D A + + + + S+ LC G+ ++A S++ EM +G P+ +
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA 306
+ +++ LC + A L + M G V + TY +VD C+ G + +A N+M
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEH 366
C PN VT+ L+H ++K + S + ++ G N YS+LI G K G+ E
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 367 AMQLWKEMM----------------EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
A Q+++ M + PN V Y AL+DG C+ + +EAR+ L M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
+G PN Y +L+ G + G +A V EM + YS LI+ K +
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726
Query: 471 EAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNI 530
A V +ML +VV Y+ MI G C D+ KL M +E QP+V TY
Sbjct: 727 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM--EEKGCQPNVVTYTA 784
Query: 531 LLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
+++ F I +++L M +G P+++T + +
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 224/444 (50%), Gaps = 15/444 (3%)
Query: 126 RMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKS---LNIQPNGLTFNLVIKA 182
R+ ++ K ++ +L ++ + +A + Y + + L+I +N+++ A
Sbjct: 192 RLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDI----FAYNMLLDA 247
Query: 183 LCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPN 242
L K ++A +VF + R+C D YTY+ ++ + + G+ DEAV L +EM EG N
Sbjct: 248 LAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLN 304
Query: 243 PFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLN 302
+N L+ L K + +A ++ M GC PNE TY+ L++ L +G+L V L
Sbjct: 305 VVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQL---VRLDG 361
Query: 303 QMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEG 362
+ +K + LV K G S+ + + +G Y S++ L G
Sbjct: 362 VVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAG 421
Query: 363 KFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYS 422
K A+++ ++ EKG +T++Y+ + L + + + +MK G P+ FTY+
Sbjct: 422 KTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYN 481
Query: 423 SLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSR 482
L+ F G+ +AI +++E++ + C + + Y+ LIN L KNG + EA + +K+M +
Sbjct: 482 ILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEK 541
Query: 483 GIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNIS 542
G+ DVV YS+++ F + V+ LF +ML + QP++ TYNILL+ + +
Sbjct: 542 GLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGC--QPNIVTYNILLDCLEKNGRTA 599
Query: 543 RAMDVLNIMLDQGCDPDFITCDIF 566
A+D+ + M QG PD IT +
Sbjct: 600 EAVDLYSKMKQQGLTPDSITYTVL 623
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 218/440 (49%), Gaps = 15/440 (3%)
Query: 58 KWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFP 117
KW K+ ++ L++ S D++ ++ +++R + ++ A K
Sbjct: 196 KW-DLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD--- 251
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
EKA +F M+ HC++ ++ ++ + + G A+ ++ + + N + +N
Sbjct: 252 EKACQVFEDMKKR-HCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITE-GLTLNVVGYN 309
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEG---RIDEAVSLLDEM 234
+++ L K +VD+A++VF + C P+ YTYS L++ L EG R+D V +
Sbjct: 310 TLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRY 369
Query: 235 QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKL 294
+G +++ L+ L K G + A +L +M +Y ++++ LC GK
Sbjct: 370 MTQG------IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKT 423
Query: 295 NKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSL 354
+A+ +L+++ V + + + T+ K + S + +++ G + + Y+ L
Sbjct: 424 IEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNIL 483
Query: 355 ISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGH 414
I+ + G+ + A+ +++E+ C+P+ + Y++LI+ L + G DEA EM+ KG
Sbjct: 484 IASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGL 543
Query: 415 LPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMM 474
P+ TYS+LM F + A +++EM C N V Y+IL++ L KNG+ EA+
Sbjct: 544 NPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVD 603
Query: 475 VWKQMLSRGIKLDVVAYSSM 494
++ +M +G+ D + Y+ +
Sbjct: 604 LYSKMKQQGLTPDSITYTVL 623
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/481 (24%), Positives = 233/481 (48%), Gaps = 25/481 (5%)
Query: 99 FIEKNFIVIFKAYGKAHFPEKAVNLFHRMEA--EFHCKQTVKSFNSVLNVIIQEGHFHRA 156
F+ I+I +++ P++ F R+ + + K V S +N++I G F
Sbjct: 134 FLYNRIILIL---SRSNLPDR----FDRVRSILDSMVKSNVHGNISTVNILI--GFFGNT 184
Query: 157 --LEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTL 214
L+ + K +++ N T+ +++A + +A +V+ I D + Y+ L
Sbjct: 185 EDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNML 244
Query: 215 MDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGC 274
+D L K+ ++A + ++M+ + + + ++I + + G A L + M +G
Sbjct: 245 LDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGL 301
Query: 275 VPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRAS--DG 332
N V YNTL+ L + ++KA+ + ++MV C PN+ T+ L++ V +G+ DG
Sbjct: 302 TLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDG 361
Query: 333 ASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDG 392
++ + +R + IYS L+ L K G A +L+ +M + Y ++++
Sbjct: 362 ---VVEISKRYM--TQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLES 416
Query: 393 LCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHN 452
LC GK EA E L ++ KG + ++ Y+++ + ++++MK + + +
Sbjct: 417 LCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPD 476
Query: 453 EVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFN 512
Y+ILI + G++ EA+ +++++ K D+++Y+S+I+ VD+ F
Sbjct: 477 IFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFK 536
Query: 513 QMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRD 572
+M QE L PDV TY+ L+ F + + A + ML +GC P+ +T +I L L
Sbjct: 537 EM--QEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEK 594
Query: 573 N 573
N
Sbjct: 595 N 595
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 168/321 (52%), Gaps = 5/321 (1%)
Query: 106 VIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCK 165
+ + K +KA+ +F RM E C+ +++ +LN+++ EG R L+ + K
Sbjct: 310 TLMQVLAKGKMVDKAIQVFSRM-VETGCRPNEYTYSLLLNLLVAEGQLVR-LDGVVEISK 367
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
Q G+ ++ +++ L K+G V +A +F + + +Y ++++ LC G+
Sbjct: 368 RYMTQ--GI-YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTI 424
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
EA+ +L ++ +G + ++N + SAL K + L + M G P+ TYN L+
Sbjct: 425 EAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILI 484
Query: 286 DGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR 345
R G++++A+++ ++ + C P+ +++ +L++ K G + ++E+G
Sbjct: 485 ASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLN 544
Query: 346 GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREY 405
+ YS+L+ K + E A L++EM+ KGC+PN V Y+ L+D L + G+ EA +
Sbjct: 545 PDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDL 604
Query: 406 LIEMKNKGHLPNSFTYSSLMR 426
+MK +G P+S TY+ L R
Sbjct: 605 YSKMKQQGLTPDSITYTVLER 625
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 178/447 (39%), Gaps = 61/447 (13%)
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
R D S+LD M N N+LI DL +LV LK N TY
Sbjct: 151 RFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKWDLKM---NSFTYK 207
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER 342
L+ R +KA + ++ + + L+ K +A V +++R
Sbjct: 208 CLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKA---CQVFEDMKKR 264
Query: 343 GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
R +EY Y+ +I + + GK + A+ L+ EM+ +G N V Y+ L+ L + D+A
Sbjct: 265 HCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKA 324
Query: 403 REYLIEMKNKGHLPNSFTYSSLM--------------------------------RGFFE 430
+ M G PN +TYS L+ R +
Sbjct: 325 IQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSK 384
Query: 431 AGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVA 490
G +A ++ +M + Y ++ LC GK +EA+ + ++ +G+ D +
Sbjct: 385 LGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMM 444
Query: 491 YSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNI 550
Y+++ + + LF +M ++ PD+ TYNIL+ +F + + A+++
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKM--KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEE 502
Query: 551 MLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDR 610
+ C PD I+ + + L N + +DE VR + Q ++
Sbjct: 503 LERSDCKPDIISYNSLINCLGKNGD--------VDEAHVRFKEMQ-------------EK 541
Query: 611 CLLPEASTWAIVVQQLCKPRNIRKAIS 637
L P+ T++ +++ K + A S
Sbjct: 542 GLNPDVVTYSTLMECFGKTERVEMAYS 568
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 204/404 (50%), Gaps = 19/404 (4%)
Query: 206 PDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFV------FNVLISALCKKGDL 259
PD T L++ LCK R+DEA+ + ++M+ + T + FN LI LCK G L
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 260 IRAAKLVDNMSLKG-CVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
A +L+ M L+ CVPN VTYN L+DG CR GKL A ++++M ++ PN VT T
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 319 LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG 378
+V G + + + +E+ G +GN Y +LI E AM +++M+E G
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 379 CEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAI 438
C P+ +Y ALI GLC+ + +A + ++K G + Y+ L+ F + + K
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVY 566
Query: 439 LVWKEMKNNSCNHNEVCYSILIN--GLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIH 496
+ +M+ + + Y+ LI+ G K+ + +E MM +QM G+ V Y ++I
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM--EQMREDGLDPTVTTYGAVID 624
Query: 497 GFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGC 556
+C+ +D+ +KLF M +++ P+ YNIL+NAF + N +A+ + M +
Sbjct: 625 AYCSVGELDEALKLFKDMGLH-SKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMV 683
Query: 557 DPDFITCDIFLKTLRDNMNPPQDGREFL---DELVVRLVKRQRT 597
P+ T + K L N G L DE+V LV + R+
Sbjct: 684 RPNVETYNALFKCL----NEKTQGETLLKLMDEMVEHLVNQIRS 723
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 129/548 (23%), Positives = 249/548 (45%), Gaps = 45/548 (8%)
Query: 51 IFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELL------------------QQM 92
+F + + GSY L +SF+ ++ A S EE L ++
Sbjct: 80 VFSQITRRLGSYSLA-ISFFEYLD--AKSQSLKRREESLSLALQSVIEFAGSEPDPRDKL 136
Query: 93 KRERRVFIEKNFIV-------IFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLN 145
R + EKN + + + +G+ ++V ++ R+++ Q N V++
Sbjct: 137 LRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQV---RNVVVD 193
Query: 146 VIIQEGHFHRALEFYSHVCKSLNI-QPNGLTFNLVIKALCKVGLV--DQAVEVFRGIHLR 202
V+++ G A + + + ++ PN +T ++V+ + K L+ ++ + +
Sbjct: 194 VLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSH 253
Query: 203 NCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRA 262
+P+S + + LCK R + A +L ++ T FN L+S L + D+ R
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 263 AKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV------ANKCVPNDVTF 316
LV M P+ VT L++ LC+ ++++A+ + QM N + + F
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 317 GTLVHGFVKQGRASDGASVLI--SLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEM 374
TL+ G K GR + +L+ LEER N Y+ LI G + GK E A ++ M
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERC-VPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 375 MEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDC 434
E +PN V + ++ G+CR + A + ++M+ +G N TY +L+ +
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 435 HKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSM 494
KA+ +++M C+ + Y LI+GLC+ + +A+ V +++ G LD++AY+ +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 495 IHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQ 554
I FC+ ++ ++ M ++ +PD TYN L++ F + + ++ M +
Sbjct: 553 IGLFCDKNNAEKVYEMLTDM--EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 555 GCDPDFIT 562
G DP T
Sbjct: 611 GLDPTVTT 618
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 187/409 (45%), Gaps = 14/409 (3%)
Query: 69 FYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFI---VIFKAYGKAHFPEKAVNLFH 125
F +L+ L + D + + +L+ +M V I + + ++ K+ ++A+ +F
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDE---VKIRPDVVTLGILINTLCKSRRVDEALEVFE 353
Query: 126 RMEAEFH-----CKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVI 180
+M + K FN++++ + + G A E + PN +T+N +I
Sbjct: 354 QMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLI 413
Query: 181 KALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTF 240
C+ G ++ A EV + P+ T +T++ G+C+ ++ AV +M+ EG
Sbjct: 414 DGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVK 473
Query: 241 PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSL 300
N + LI A C ++ +A + M GC P+ Y L+ GLC+ + + A+ +
Sbjct: 474 GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV 533
Query: 301 LNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFK 360
+ ++ + + + L+ F + A +L +E+ G + + Y++LIS K
Sbjct: 534 VEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Query: 361 EGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL-PNSF 419
FE ++ ++M E G +P Y A+ID C G+ DEA + +M + PN+
Sbjct: 594 HKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTV 653
Query: 420 TYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGK 468
Y+ L+ F + G+ +A+ + +EMK N Y+ L C N K
Sbjct: 654 IYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFK--CLNEK 700
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 81/177 (45%), Gaps = 1/177 (0%)
Query: 58 KWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFP 117
K G + L L++ LI ++ + E+L M++E + + + +GK
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
E + +M E TV ++ +V++ G AL+ + + + PN + +N
Sbjct: 598 ESVERMMEQMR-EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYN 656
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEM 234
++I A K+G QA+ + + ++ P+ TY+ L L ++ + + + L+DEM
Sbjct: 657 ILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 185 bits (470), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 200/381 (52%), Gaps = 2/381 (0%)
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG 238
+++ L ++ +D+A+ + R + + PD+ TY+ ++ LCK+G I A+ LL++M + G
Sbjct: 145 LVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSG 204
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAV 298
+ P+ +N +I + G+ +A + + GC P +TY LV+ +CR +A+
Sbjct: 205 SPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAI 264
Query: 299 SLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGL 358
+L M C P+ VT+ +LV+ ++G + ASV+ + G N Y++L+ L
Sbjct: 265 EVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSL 324
Query: 359 FKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNS 418
++ ++ M + P + Y+ LI+GLC+ A ++ +M + LP+
Sbjct: 325 CSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDI 384
Query: 419 FTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQ 478
TY++++ + G AI + +KN C + Y+ +I+GL K G + +A+ ++ Q
Sbjct: 385 VTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQ 444
Query: 479 MLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQ 538
ML GI D + S+I+GFC A LV++ ++ + + ++ +TY +++ ++
Sbjct: 445 MLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRG--STYRLVIQGLCKK 502
Query: 539 NNISRAMDVLNIMLDQGCDPD 559
I A++V+ IML GC PD
Sbjct: 503 KEIEMAIEVVEIMLTGGCKPD 523
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 204/426 (47%), Gaps = 2/426 (0%)
Query: 72 LIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEF 131
++ L ++ +L++ M R +V + + + + +KA+ + M
Sbjct: 110 ILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSG 169
Query: 132 HCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQ 191
T+ ++N ++ + ++GH AL + S P+ +T+N VI+ + G +Q
Sbjct: 170 GVPDTI-TYNMIIGNLCKKGHIRTALVLLEDMSLS-GSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 192 AVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLIS 251
A+ ++ C P TY+ L++ +C+ A+ +L++M +EG +P+ +N L++
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Query: 252 ALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVP 311
C++G+L A ++ ++ G N VTYNTL+ LC ++ +LN M P
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCP 347
Query: 312 NDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLW 371
+T+ L++G K S + E+ + Y++++ + KEG + A++L
Sbjct: 348 TVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELL 407
Query: 372 KEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEA 431
+ C P + Y+++IDGL ++G +A E +M + G P+ T SL+ GF A
Sbjct: 408 GLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRA 467
Query: 432 GDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAY 491
+A V KE N Y ++I GLCK ++ A+ V + ML+ G K D Y
Sbjct: 468 NLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIY 527
Query: 492 SSMIHG 497
++++ G
Sbjct: 528 TAIVKG 533
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 194/404 (48%), Gaps = 16/404 (3%)
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA 306
N ++ LC G L A KLV+ M+ VP+ + + LV GL R +L+KA+ +L MV
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEH 366
+ VP+ +T+ ++ K+G +L + G + Y+++I +F G E
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 367 AMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMR 426
A++ WK+ ++ GC P + Y+ L++ +CR + A E L +M +G P+ TY+SL+
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Query: 427 GFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKL 486
G+ + V + + ++ N V Y+ L++ LC + E + M
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCP 347
Query: 487 DVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMD 546
V+ Y+ +I+G C A+L+ + + F QML E + PD+ TYN +L A ++ + A++
Sbjct: 348 TVITYNILINGLCKARLLSRAIDFFYQML--EQKCLPDIVTYNTVLGAMSKEGMVDDAIE 405
Query: 547 VLNIMLDQGCDPDFITCDIFLKTLRDN---------MNPPQDGREFLDELVVR-----LV 592
+L ++ + C P IT + + L + D F D++ R
Sbjct: 406 LLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFC 465
Query: 593 KRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
+ A ++++ +R ST+ +V+Q LCK + I AI
Sbjct: 466 RANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAI 509
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 175/337 (51%), Gaps = 1/337 (0%)
Query: 137 VKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVF 196
V ++N+V+ + G+ +A+ F+ ++ P +T+ ++++ +C+ +A+EV
Sbjct: 209 VITYNTVIRCMFDYGNAEQAIRFWKDQLQN-GCPPFMITYTVLVELVCRYCGSARAIEVL 267
Query: 197 RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
+ + C PD TY++L++ C+ G ++E S++ + G N +N L+ +LC
Sbjct: 268 EDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSH 327
Query: 257 GDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTF 316
++++ M P +TYN L++GLC+ L++A+ QM+ KC+P+ VT+
Sbjct: 328 EYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTY 387
Query: 317 GTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMME 376
T++ K+G D +L L+ Y+S+I GL K+G + A++L+ +M++
Sbjct: 388 NTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLD 447
Query: 377 KGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHK 436
G P+ + +LI G CR +EA + L E N+G+ TY +++G + +
Sbjct: 448 AGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEM 507
Query: 437 AILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAM 473
AI V + M C +E Y+ ++ G+ + G EA+
Sbjct: 508 AIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 148/284 (52%), Gaps = 2/284 (0%)
Query: 119 KAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNL 178
+A+ + M E C + ++NS++N + G+ H+ S ++ N +T+N
Sbjct: 262 RAIEVLEDMAVE-GCYPDIVTYNSLVNYNCRRGNLEEVASVIQHIL-SHGLELNTVTYNT 319
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG 238
++ +LC D+ E+ ++ + P TY+ L++GLCK + A+ +M +
Sbjct: 320 LLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQK 379
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAV 298
P+ +N ++ A+ K+G + A +L+ + C P +TYN+++DGL +KG + KA+
Sbjct: 380 CLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKAL 439
Query: 299 SLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGL 358
L +QM+ P+D+T +L++GF + + VL RG+ Y +I GL
Sbjct: 440 ELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGL 499
Query: 359 FKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
K+ + E A+++ + M+ GC+P+ +Y+A++ G+ G EA
Sbjct: 500 CKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 104/198 (52%), Gaps = 1/198 (0%)
Query: 136 TVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEV 195
TV ++N ++N + + RA++F+ + + P+ +T+N V+ A+ K G+VD A+E+
Sbjct: 348 TVITYNILINGLCKARLLSRAIDFFYQMLEQ-KCLPDIVTYNTVLGAMSKEGMVDDAIEL 406
Query: 196 FRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCK 255
+ C P TY++++DGL K+G + +A+ L +M G FP+ LI C+
Sbjct: 407 LGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCR 466
Query: 256 KGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVT 315
+ A +++ S +G TY ++ GLC+K ++ A+ ++ M+ C P++
Sbjct: 467 ANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETI 526
Query: 316 FGTLVHGFVKQGRASDGA 333
+ +V G + G S+
Sbjct: 527 YTAIVKGVEEMGMGSEAV 544
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 208/401 (51%), Gaps = 5/401 (1%)
Query: 117 PEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTF 176
P++A ++F+ + E H K ++ ++ +++ + ++ HFH L S V K+ ++P+ + F
Sbjct: 335 PQEAHSIFNTLIEEGH-KPSLITYTTLVTALTRQKHFHSLLSLISKVEKN-GLKPDTILF 392
Query: 177 NLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEM-Q 235
N +I A + G +DQA+++F + C P + T++TL+ G K G+++E+ LLD M +
Sbjct: 393 NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLR 452
Query: 236 IEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLN 295
E PN N+L+ A C + + A +V M G P+ VT+NTL R G
Sbjct: 453 DEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTC 512
Query: 296 KAVSLL-NQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSL 354
A ++ +M+ NK PN T GT+V+G+ ++G+ + ++E G N ++++SL
Sbjct: 513 TAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSL 572
Query: 355 ISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGH 414
I G + ++ M E G +P+ V +S L++ G E +M G
Sbjct: 573 IKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGI 632
Query: 415 LPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMM 474
P+ +S L +G+ AG+ KA + +M+ N V Y+ +I+G C G++ +AM
Sbjct: 633 DPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQ 692
Query: 475 VWKQMLS-RGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
V+K+M G+ ++ Y ++I GF A+ + +L M
Sbjct: 693 VYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDM 733
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 207/424 (48%), Gaps = 4/424 (0%)
Query: 137 VKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVF 196
V+S ++N +I+ G A ++ + + + +P+ +T+ ++ AL + + +
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGH-KPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 197 RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
+ PD+ ++ +++ + G +D+A+ + ++M+ G P FN LI K
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 257 GDLIRAAKLVDNMSLKGCV-PNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVT 315
G L +++L+D M + PN+ T N LV C + K+ +A +++ +M + P+ VT
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 316 FGTLVHGFVKQGRASDGASVLIS-LEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEM 374
F TL + + G ++I + + N ++++G +EGK E A++ + M
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 375 MEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDC 434
E G PN V+++LI G D E + M+ G P+ T+S+LM + GD
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDM 617
Query: 435 HKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSM 494
+ ++ +M + + +SIL G + G+ +A + QM G++ +VV Y+ +
Sbjct: 618 KRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQI 677
Query: 495 IHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQ 554
I G+C+A + + M+++ +M C L P++ TY L+ F + +A ++L M +
Sbjct: 678 ISGWCSAGEMKKAMQVYKKM-CGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGK 736
Query: 555 GCDP 558
P
Sbjct: 737 NVVP 740
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 176/382 (46%), Gaps = 38/382 (9%)
Query: 207 DSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV 266
D + + LM+GL + GR EA S+ + + EG P+ + L++AL ++ L+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 267 DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQ 326
+ G P+ + +N +++ G L++A+ + +M + C P TF TL+ G+ K
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 327 GRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVY 386
G+ + + +L M L EM+ +PN
Sbjct: 438 GKLEESSRLL------------------------------DMMLRDEML----QPNDRTC 463
Query: 387 SALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGD-CHKAILVWKEMK 445
+ L+ C + K +EA + +M++ G P+ T+++L + + G C ++ M
Sbjct: 464 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRML 523
Query: 446 NNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVD 505
+N N ++NG C+ GK+ EA+ + +M G+ ++ ++S+I GF N +D
Sbjct: 524 HNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMD 583
Query: 506 QGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDI 565
++ + M +E ++PDV T++ L+NA+ ++ R ++ ML+ G DPD I
Sbjct: 584 GVGEVVDLM--EEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSI 641
Query: 566 FLKTLRDNMNPPQDGREFLDEL 587
K P+ + L+++
Sbjct: 642 LAKGYA-RAGEPEKAEQILNQM 662
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 169/369 (45%), Gaps = 9/369 (2%)
Query: 69 FYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRME 128
F ++I + S + ++ ++MK F + K YGK E++ L M
Sbjct: 392 FNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMML 451
Query: 129 AEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVC---KSLNIQPNGLTFNLVIKALCK 185
+ + ++ + N+++Q R +E ++ +S ++P+ +TFN + KA +
Sbjct: 452 RD----EMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYAR 507
Query: 186 VGLVDQAVEVFRGIHLRN-CAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPF 244
+G A ++ L N P+ T T+++G C+EG+++EA+ M+ G PN F
Sbjct: 508 IGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLF 567
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM 304
VFN LI D+ ++VD M G P+ VT++TL++ G + + + M
Sbjct: 568 VFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDM 627
Query: 305 VANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKF 364
+ P+ F L G+ + G +L + + G R N IY+ +ISG G+
Sbjct: 628 LEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEM 687
Query: 365 EHAMQLWKEMME-KGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSS 423
+ AMQ++K+M G PN Y LI G + +A E L +M+ K +P T
Sbjct: 688 KKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQL 747
Query: 424 LMRGFFEAG 432
+ G+ G
Sbjct: 748 IADGWKSIG 756
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/487 (26%), Positives = 231/487 (47%), Gaps = 10/487 (2%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
++F ++++ + D ++++ +MKR F E + ++ + K E+A FH
Sbjct: 239 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA-RRFHG 297
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
T SFN ++ ++G F A + + I P T+N+ I ALC
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA-GIYPTTSTYNIYICALCDF 356
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
G +D A E+ + APD +Y+TLM G K G+ EA L D+++ P+ +
Sbjct: 357 GRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 412
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA 306
N LI LC+ G+L A +L + M+ + P+ +TY TLV G + G L+ A + ++M+
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEY-IYSSLISGLFKEGKFE 365
P+ + T G ++ G + + + H + IY+ I GL K G
Sbjct: 473 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV 532
Query: 366 HAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
A++ +++ G P+ V Y+ +I G G+ AR EM K P+ TY L+
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI 592
Query: 426 RGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIK 485
G +AG +A EMK N + ++ L+ G+CK G + EA +M GI
Sbjct: 593 YGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIP 652
Query: 486 LDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAM 545
+ +Y+ +I C+ + ++ +KL+ +ML + E++PD T+ L ++++ SR +
Sbjct: 653 PNKYSYTMLISKNCDFEKWEEVVKLYKEML--DKEIEPDGYTHRALFKHL-EKDHESREV 709
Query: 546 DVLNIML 552
+ L +L
Sbjct: 710 EFLERLL 716
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 223/483 (46%), Gaps = 40/483 (8%)
Query: 111 YGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQ 170
Y K EK + F +M + +V++ N VL V+ ++A Y + + I
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLP-SVRNCNIVLKVLRDSRMMNKASAVYETMIEH-GIM 235
Query: 171 PNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSL 230
P +TFN ++ + K G +++ +++ + RN TY+ L++G K G+++EA
Sbjct: 236 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF 295
Query: 231 LDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCR 290
+M+ G P+ FN LI CK+G A + D M G P TYN + LC
Sbjct: 296 HGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 355
Query: 291 KGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYI 350
G+++ A LL+ M A P+ V++ TL+HG++K G+ + + + L +
Sbjct: 356 FGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 411
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
Y++LI GL + G E A +L +EM + P+ + Y+ L+ G + G A E EM
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVC-YSILINGLCKNGKL 469
KG P+ + Y++ G GD KA + +EM + ++ Y++ I+GLCK G L
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 531
Query: 470 MEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML-------------- 515
++A+ +++ G+ D V Y+++I G+ L+++ML
Sbjct: 532 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVL 591
Query: 516 -------------------CQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGC 556
++ ++P+V T+N LL + NI A L M ++G
Sbjct: 592 IYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI 651
Query: 557 DPD 559
P+
Sbjct: 652 PPN 654
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 190/443 (42%), Gaps = 26/443 (5%)
Query: 218 LCKEGRIDEAVSLLDEMQIE-GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVP 276
+ ++ R+ S + E IE G P FN ++ + K GDL R K+ M +
Sbjct: 212 VLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEF 271
Query: 277 NEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVL 336
+EVTYN L++G + GK+ +A M + +F L+ G+ KQG D V
Sbjct: 272 SEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVT 331
Query: 337 ISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCRE 396
+ G Y+ I L G+ + A +L M P+ V Y+ L+ G +
Sbjct: 332 DEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKM 387
Query: 397 GKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCY 456
GK EA +++ P+ TY++L+ G E+G+ A + +EM + + Y
Sbjct: 388 GKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITY 447
Query: 457 SILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLC 516
+ L+ G KNG L A V+ +ML +GIK D AY++ G D+ +L +M+
Sbjct: 448 TTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVA 507
Query: 517 QEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNP 576
+ PD+ YN+ ++ + N+ +A++ + G PD +T ++ +N
Sbjct: 508 TDHH-APDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEN-GQ 565
Query: 577 PQDGREFLDELVVRLV---------------KRQRTIGASKIIEVMLDRCLLPEASTWAI 621
+ R DE++ + + K R A + M R + P T
Sbjct: 566 FKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNA 625
Query: 622 VVQQLCKPRNIRKAISECWSRLC 644
++ +CK N I E + LC
Sbjct: 626 LLYGMCKAGN----IDEAYRYLC 644
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 163/345 (47%), Gaps = 9/345 (2%)
Query: 218 LCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV---DNMSLKGC 274
L E ID + +D++ I+G+F +L L A K + + M KG
Sbjct: 140 LVAERSIDLGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGF 199
Query: 275 VPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGAS 334
+P+ N ++ L +NKA ++ M+ + +P +TF T++ K G
Sbjct: 200 LPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDK 259
Query: 335 VLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLC 394
+ + ++ R +E Y+ LI+G K GK E A + +M G ++ LI+G C
Sbjct: 260 IWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYC 319
Query: 395 REGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEV 454
++G D+A EM N G P + TY+ + + G A +E+ ++ + V
Sbjct: 320 KQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA----RELLSSMAAPDVV 375
Query: 455 CYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
Y+ L++G K GK +EA +++ + + I +V Y+++I G C + ++ +L +M
Sbjct: 376 SYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEM 435
Query: 515 LCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
Q + PDV TY L+ F + N+S A +V + ML +G PD
Sbjct: 436 TTQL--IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 478
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 200/408 (49%), Gaps = 45/408 (11%)
Query: 206 PDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFV------FNVLISALCKKGDL 259
PD T L++ LCK R+DEA+ + ++M+ + T + FN LI LCK G L
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 260 IRAAKLVDNMSLKG-CVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
A +L+ M L+ CVPN VTYN L+DG CR GKL A ++++M ++ PN VT T
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 319 LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG 378
+V G + + + +E+ G +GN Y +LI E AM +++M+E G
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 379 CEPNTVVYSALIDGLC---------------REG--------------------KADEAR 403
C P+ +Y ALI GLC +EG A++
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVY 566
Query: 404 EYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGL 463
E L +M+ +G P+S TY++L+ F + D + ++M+ + + Y +I+
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Query: 464 CKNGKLMEAMMVWKQM-LSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQ 522
C G+L EA+ ++K M L + + V Y+ +I+ F Q + L +M + ++
Sbjct: 627 CSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM--KMKMVR 684
Query: 523 PDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
P+V TYN L ++ + +++ M++Q C+P+ IT +I ++ L
Sbjct: 685 PNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 130/548 (23%), Positives = 248/548 (45%), Gaps = 45/548 (8%)
Query: 51 IFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQ------------------QM 92
+F + + GSY L +SF+ ++ A S EE L ++
Sbjct: 80 VFSQITRRLGSYSLA-ISFFEYLD--AKSQSLKRREESLSLALQSVIEFAGSEPDPRDKL 136
Query: 93 KRERRVFIEKNFIVIFKA-------YGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLN 145
R + EKN + A +G+ ++V ++ R+++ Q N V++
Sbjct: 137 LRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVR---NVVVD 193
Query: 146 VIIQEGHFHRALEFYSHVCKSLNI-QPNGLTFNLVIKALCKVGLV--DQAVEVFRGIHLR 202
V+++ G A + + + ++ PN +T ++V+ + K L+ ++ + +
Sbjct: 194 VLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSH 253
Query: 203 NCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRA 262
+P+S + + LCK R + A +L ++ T FN L+S L + D+ R
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 263 AKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV------ANKCVPNDVTF 316
LV M P+ VT L++ LC+ ++++A+ + QM N + + F
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 317 GTLVHGFVKQGRASDGASVLI--SLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEM 374
TL+ G K GR + +L+ LEER N Y+ LI G + GK E A ++ M
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCV-PNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 375 MEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDC 434
E +PN V + ++ G+CR + A + ++M+ +G N TY +L+ +
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 435 HKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSM 494
KA+ +++M C+ + Y LI+GLC+ + +A+ V +++ G LD++AY+ +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 495 IHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQ 554
I FC+ ++ ++ M ++ +PD TYN L++ F + + ++ M +
Sbjct: 553 IGLFCDKNNAEKVYEMLTDM--EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 555 GCDPDFIT 562
G DP T
Sbjct: 611 GLDPTVTT 618
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 187/409 (45%), Gaps = 14/409 (3%)
Query: 69 FYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFI---VIFKAYGKAHFPEKAVNLFH 125
F +L+ L + D + + +L+ +M V I + + ++ K+ ++A+ +F
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDE---VKIRPDVVTLGILINTLCKSRRVDEALEVFE 353
Query: 126 RMEAEFH-----CKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVI 180
+M + K FN++++ + + G A E + PN +T+N +I
Sbjct: 354 QMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLI 413
Query: 181 KALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTF 240
C+ G ++ A EV + P+ T +T++ G+C+ ++ AV +M+ EG
Sbjct: 414 DGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVK 473
Query: 241 PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSL 300
N + LI A C ++ +A + M GC P+ Y L+ GLC+ + + A+ +
Sbjct: 474 GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV 533
Query: 301 LNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFK 360
+ ++ + + + L+ F + A +L +E+ G + + Y++LIS K
Sbjct: 534 VEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Query: 361 EGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL-PNSF 419
FE ++ ++M E G +P Y A+ID C G+ DEA + +M + PN+
Sbjct: 594 HKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTV 653
Query: 420 TYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGK 468
Y+ L+ F + G+ +A+ + +EMK N Y+ L C N K
Sbjct: 654 IYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFK--CLNEK 700
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 161/355 (45%), Gaps = 2/355 (0%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
++A L RM+ E C ++N +++ + G A E S + K I+PN +T N
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM-KEDEIKPNVVTVN 445
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
++ +C+ ++ AV F + + TY TL+ C +++A+ ++M
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G P+ ++ LIS LC+ A ++V+ + G + + YN L+ C K K
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKV 565
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
+L M P+ +T+ TL+ F K ++ + E G Y ++I
Sbjct: 566 YEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA 625
Query: 358 LFKEGKFEHAMQLWKEM-MEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLP 416
G+ + A++L+K+M + PNTV+Y+ LI+ + G +A EMK K P
Sbjct: 626 YCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRP 685
Query: 417 NSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLME 471
N TY++L + E + + EM SC N++ IL+ L + +L++
Sbjct: 686 NVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVK 740
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 170/381 (44%), Gaps = 39/381 (10%)
Query: 63 KLGDLSFYSLIEKLAASSDFASLEELLQQMKRERR-VFIEKNFIVIFKAYGKAHFPEKAV 121
K + F +LI+ L EELL +MK E R V + + Y +A E A
Sbjct: 367 KADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAK 426
Query: 122 NLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIK 181
+ RM+ E K V + N+++ + + + A+ F+ + K ++ N +T+ +I
Sbjct: 427 EVVSRMK-EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE-GVKGNVVTYMTLIH 484
Query: 182 ALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAV------------- 228
A C V V++A+ + + C+PD+ Y L+ GLC+ R +A+
Sbjct: 485 ACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSL 544
Query: 229 ----------------------SLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV 266
+L +M+ EG P+ +N LIS K D +++
Sbjct: 545 DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM 604
Query: 267 DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM-VANKCVPNDVTFGTLVHGFVK 325
+ M G P TY ++D C G+L++A+ L M + +K PN V + L++ F K
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Query: 326 QGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVV 385
G S+ ++ + R N Y++L L ++ + E ++L EM+E+ CEPN +
Sbjct: 665 LGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQIT 724
Query: 386 YSALIDGLCREGKADEAREYL 406
L++ L + + R+++
Sbjct: 725 MEILMERLSGSDELVKLRKFM 745
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 1/214 (0%)
Query: 58 KWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFP 117
K G + L L++ LI ++ + E+L M++E + + + +GK
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
E + +M E TV ++ +V++ G AL+ + + + PN + +N
Sbjct: 598 ESVERMMEQMR-EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYN 656
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
++I A K+G QA+ + + ++ P+ TY+ L L ++ + + + L+DEM +
Sbjct: 657 ILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQ 716
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSL 271
PN +L+ L +L++ K + S+
Sbjct: 717 SCEPNQITMEILMERLSGSDELVKLRKFMQGYSV 750
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 217/434 (50%), Gaps = 3/434 (0%)
Query: 50 EIFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFK 109
+IF S + G + + ++ L++ L F +++ +L QMK E F E F+ + +
Sbjct: 74 DIFNKASQQKG-FNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMR 132
Query: 110 AYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNI 169
+ ++ +K + +F+ ++ K ++ + ++ LN++I G + + + + +L +
Sbjct: 133 HFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGL 192
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCA-PDSYTYSTLMDGLCKEGRIDEAV 228
QPN FN+++K CK G ++ A V + + P+S TYSTLMD L R EAV
Sbjct: 193 QPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAV 252
Query: 229 SLLDEM-QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDG 287
L ++M EG P+P FNV+I+ C+ G++ RA K++D M GC PN Y+ L++G
Sbjct: 253 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 312
Query: 288 LCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGN 347
C+ GK+ +A +++ + V + TL++ F + G + +L ++ R +
Sbjct: 313 FCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRAD 372
Query: 348 EYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLI 407
Y+ ++ GL EG+ E A+Q+ + +G N Y +++ LC G+ ++A ++L
Sbjct: 373 TLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLS 432
Query: 408 EMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNG 467
M +G P+ T++ L+ E+G + V + ++ +CK
Sbjct: 433 VMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKER 492
Query: 468 KLMEAMMVWKQMLS 481
KL+ + ++S
Sbjct: 493 KLVHVFELLDSLVS 506
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 210/436 (48%), Gaps = 24/436 (5%)
Query: 80 SDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKS 139
+ F S E + MKRER P+ +++F++ + +
Sbjct: 51 TKFISHESAVSLMKRERD-------------------PQGVLDIFNKASQQKGFNHNNAT 91
Query: 140 FNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGI 199
++ +L+ +++ F A++ H K + F +++ + L D+ +E+F I
Sbjct: 92 YSVLLDNLVRHKKF-LAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLI 150
Query: 200 H-LRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE-GTFPNPFVFNVLISALCKKG 257
+ P ST ++ L G ++ + LL + G PN +FN+L+ CK G
Sbjct: 151 QVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNG 210
Query: 258 DLIRAAKLVDNMSLKG-CVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCV-PNDVT 315
D+ A +V+ M G PN +TY+TL+D L + +AV L M++ + + P+ VT
Sbjct: 211 DINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVT 270
Query: 316 FGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM 375
F +++GF + G +L +++ G N Y YS+L++G K GK + A Q + E+
Sbjct: 271 FNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVK 330
Query: 376 EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCH 435
+ G + +TV Y+ L++ CR G+ DEA + L EMK ++ TY+ ++RG G
Sbjct: 331 KTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSE 390
Query: 436 KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
+A+ + + + + N+ Y I++N LC NG+L +A+ M RGI ++ ++
Sbjct: 391 EALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Query: 496 HGFCNAQLVDQGMKLF 511
C + + G+++
Sbjct: 451 VRLCESGYTEIGVRVL 466
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 193/419 (46%), Gaps = 26/419 (6%)
Query: 235 QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKL 294
Q +G N ++VL+ L + + ++ M + C E + L+ R
Sbjct: 81 QQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLH 140
Query: 295 NKAVSLLN--QMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER-GHRGNEYIY 351
+K + + N Q++A + P+ T ++ + G + +L+ + G + N I+
Sbjct: 141 DKVMEMFNLIQVIA-RVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIF 199
Query: 352 SSLISGLFKEGKFEHAMQLWKEMMEKGCE-PNTVVYSALIDGLCREGKADEAREYLIEMK 410
+ L+ K G A + +EM G PN++ YS L+D L ++ EA E +M
Sbjct: 200 NILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMI 259
Query: 411 NK-GHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKL 469
+K G P+ T++ ++ GF AG+ +A + MK N CN N YS L+NG CK GK+
Sbjct: 260 SKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKI 319
Query: 470 MEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYN 529
EA + ++ G+KLD V Y+++++ FC D+ MKL +M + + + D TYN
Sbjct: 320 QEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEM--KASRCRADTLTYN 377
Query: 530 ILLNAFYQQNNISRAMDVLN------IMLDQG----------CDPDFITCDIFLKTLRDN 573
++L + A+ +L+ + L++G C+ + FL + +
Sbjct: 378 VILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSER 437
Query: 574 MNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNI 632
P +ELVVRL + T +++ L L+P +W VV+ +CK R +
Sbjct: 438 GIWPHHAT--WNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKL 494
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 151/607 (24%), Positives = 263/607 (43%), Gaps = 55/607 (9%)
Query: 71 SLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAE 130
S++ K S A++ LQ+ V+ + I F G+ +AVN+F +ME E
Sbjct: 181 SMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYR---EAVNVFKKME-E 236
Query: 131 FHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVD 190
CK T+ ++N +LNV + G + KS I P+ T+N +I + L
Sbjct: 237 DGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQ 296
Query: 191 QAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLI 250
+A +VF + + D TY+ L+D K R EA+ +L+EM + G P+ +N LI
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 251 SALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCV 310
SA + G L A +L + M+ KG P+ TY TL+ G R GK+ A+S+ +M C
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK 416
Query: 311 PN-----------------------------------DVTFGTLVHGFVKQGRASDGASV 335
PN VT+ TL+ F + G S+ + V
Sbjct: 417 PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGV 476
Query: 336 LISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCR 395
++ G +++LIS + G FE AM +++ M++ G P+ Y+ ++ L R
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 536
Query: 396 EGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVC 455
G +++ + L EM++ PN TY SL+ + + + +E+ + V
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVL 596
Query: 456 YSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
L+ K L EA + ++ RG D+ +SM+ + Q+V + + + M
Sbjct: 597 LKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYM- 655
Query: 516 CQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMN 575
+E P +ATYN L+ + + ++ ++L +L +G PD I+ + + N
Sbjct: 656 -KERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 576 PPQDGREFLD----ELVVRLVKRQRTIG----------ASKIIEVMLDRCLLPEASTWAI 621
R F + +V ++ IG A ++ M+ P +T+
Sbjct: 715 MRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 622 VVQQLCK 628
+V CK
Sbjct: 775 IVDGYCK 781
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/504 (24%), Positives = 242/504 (48%), Gaps = 34/504 (6%)
Query: 141 NSVLNVII----QEGHFHRALEFYSHVCKSLNIQPNGLTFNL-----VIKALCKVGLVDQ 191
NSV+ +II +EG A ++ +Q +G + ++ +I A G +
Sbjct: 173 NSVVAIIISMLGKEGRVSSAANMFN------GLQEDGFSLDVYSYTSLISAFANSGRYRE 226
Query: 192 AVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRI-DEAVSLLDEMQIEGTFPNPFVFNVLI 250
AV VF+ + C P TY+ +++ K G ++ SL+++M+ +G P+ + +N LI
Sbjct: 227 AVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI 286
Query: 251 SALCKKGDLIR-AAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC 309
+ CK+G L + AA++ + M G ++VTYN L+D + + +A+ +LN+MV N
Sbjct: 287 TC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGF 345
Query: 310 VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
P+ VT+ +L+ + + G + + + E+G + + + Y++L+SG + GK E AM
Sbjct: 346 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF 429
+++EM GC+PN ++A I GK E + E+ G P+ T+++L+ F
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 430 EAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVV 489
+ G + V+KEMK ++ LI+ + G +AM V+++ML G+ D+
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 490 AYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLN 549
Y++++ + +Q K+ +M ++ +P+ TY LL+A+ I +
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEM--EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAE 583
Query: 550 IMLDQGCDPDFI----------TCDIFLKTLRDNMNPPQDGRE----FLDELVVRLVKRQ 595
+ +P + CD+ + R + G L+ +V +RQ
Sbjct: 584 EVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQ 643
Query: 596 RTIGASKIIEVMLDRCLLPEASTW 619
A+ +++ M +R P +T+
Sbjct: 644 MVAKANGVLDYMKERGFTPSMATY 667
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 182/365 (49%), Gaps = 3/365 (0%)
Query: 207 DSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV 266
D+ + ++ L KEGR+ A ++ + +Q +G + + + LISA G A +
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 267 DNMSLKGCVPNEVTYNTLVDGLCRKG-KLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVK 325
M GC P +TYN +++ + G NK SL+ +M ++ P+ T+ TL+ +
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 326 QGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVV 385
+ A V ++ G ++ Y++L+ K + + AM++ EM+ G P+ V
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT 351
Query: 386 YSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMK 445
Y++LI R+G DEA E +M KG P+ FTY++L+ GF AG A+ +++EM+
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 446 NNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVD 505
N C N ++ I GK E M ++ ++ G+ D+V +++++ F +
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 506 QGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDI 565
+ +F +M + A P+ T+N L++A+ + + +AM V MLD G PD T +
Sbjct: 472 EVSGVFKEM--KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 529
Query: 566 FLKTL 570
L L
Sbjct: 530 VLAAL 534
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/494 (19%), Positives = 215/494 (43%), Gaps = 41/494 (8%)
Query: 87 ELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNV 146
++ ++MK + + + + YGK+H P++A+ + + M V ++NS+++
Sbjct: 300 QVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV-TYNSLISA 358
Query: 147 IIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAP 206
++G A+E + + + +P+ T+ ++ + G V+ A+ +F + C P
Sbjct: 359 YARDGMLDEAMELKNQMAEK-GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 207 DSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV 266
+ T++ + G+ E + + DE+ + G P+ +N L++ + G + +
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 267 DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQ 326
M G VP T+NTL+ R G +A+++ +M+ P+ T+ T++ +
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Query: 327 GRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGK----------------------- 363
G VL +E+ + NE Y SL+ + GK
Sbjct: 538 GMWEQSEKVLAEMEDGRCKPNELTYCSLLHA-YANGKEIGLMHSLAEEVYSGVIEPRAVL 596
Query: 364 -------------FEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
A + + E+ E+G P+ ++++ R +A L MK
Sbjct: 597 LKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK 656
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
+G P+ TY+SLM + D K+ + +E+ + + Y+ +I C+N ++
Sbjct: 657 ERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMR 716
Query: 471 EAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNI 530
+A ++ +M + GI DV+ Y++ I + + ++ + + M+ + +P+ TYN
Sbjct: 717 DASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMI--KHGCRPNQNTYNS 774
Query: 531 LLNAFYQQNNISRA 544
+++ + + N A
Sbjct: 775 IVDGYCKLNRKDEA 788
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 186/445 (41%), Gaps = 41/445 (9%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRE---RRVFIEKNFIVIFKAYGKAHFPEKAVNL 123
+++ SLI A EL QM + VF + F+ GK E A+++
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV---ESAMSI 406
Query: 124 FHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYS--HVC----------------- 164
F M CK + +FN+ + + G F ++ + +VC
Sbjct: 407 FEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 165 ---------------KSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSY 209
K P TFN +I A + G +QA+ V+R + PD
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 210 TYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNM 269
TY+T++ L + G +++ +L EM+ PN + L+ A ++ L + +
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Query: 270 SLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRA 329
P V TLV + L +A +++ P+ T ++V + ++
Sbjct: 586 YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMV 645
Query: 330 SDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSAL 389
+ VL ++ERG + Y+SL+ + F + ++ +E++ KG +P+ + Y+ +
Sbjct: 646 AKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTV 705
Query: 390 IDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSC 449
I CR + +A EM+N G +P+ TY++ + + +AI V + M + C
Sbjct: 706 IYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGC 765
Query: 450 NHNEVCYSILINGLCKNGKLMEAMM 474
N+ Y+ +++G CK + EA +
Sbjct: 766 RPNQNTYNSIVDGYCKLNRKDEAKL 790
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 164/334 (49%), Gaps = 11/334 (3%)
Query: 88 LLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVI 147
+ ++MKR V + F + AY + E+A+ ++ RM + + ++N+VL +
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM-LDAGVTPDLSTYNTVLAAL 534
Query: 148 IQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALC---KVGLVDQ-AVEVFRGIHLRN 203
+ G + ++ + + + + +PN LT+ ++ A ++GL+ A EV+ G+
Sbjct: 535 ARGGMWEQSEKVLAEM-EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV---- 589
Query: 204 CAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAA 263
P + TL+ K + EA E++ G P+ N ++S ++ + +A
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKAN 649
Query: 264 KLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGF 323
++D M +G P+ TYN+L+ R K+ +L +++A P+ +++ T+++ +
Sbjct: 650 GVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAY 709
Query: 324 VKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNT 383
+ R D + + + G + Y++ I + FE A+ + + M++ GC PN
Sbjct: 710 CRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQ 769
Query: 384 VVYSALIDGLCREGKADEAREYLIEMKN-KGHLP 416
Y++++DG C+ + DEA+ ++ +++N H P
Sbjct: 770 NTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAP 803
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 169/302 (55%), Gaps = 6/302 (1%)
Query: 269 MSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGR 328
M GC P+ VT+ TL++GLC +G++ +A++L+++MV P +GT+++G K G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 329 ASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSA 388
++L +EE + + IY+++I L K+G HA L+ EM +KG P+ + YS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 389 LIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNS 448
+ID CR G+ +A + L +M + P+ T+S+L+ + G +A ++ +M
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 449 CNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGM 508
+ Y+ +I+G CK +L +A + M S+ DVV +S++I+G+C A+ VD GM
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 509 KLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLK 568
++F +M + + TY L++ F Q ++ A D+LN+M+ G P++IT L
Sbjct: 237 EIFCEM--HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLA 294
Query: 569 TL 570
+L
Sbjct: 295 SL 296
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 163/299 (54%), Gaps = 4/299 (1%)
Query: 204 CAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAA 263
C PD T++TLM+GLC EGR+ +A++L+D M EG P + +I+ LCK GD A
Sbjct: 6 CRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESAL 61
Query: 264 KLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGF 323
L+ M + V YN ++D LC+ G A +L +M P+ +T+ ++ F
Sbjct: 62 NLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSF 121
Query: 324 VKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNT 383
+ GR +D +L + ER + +S+LI+ L KEGK A +++ +M+ +G P T
Sbjct: 122 CRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT 181
Query: 384 VVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKE 443
+ Y+++IDG C++ + ++A+ L M +K P+ T+S+L+ G+ +A + ++ E
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 241
Query: 444 MKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQ 502
M N V Y+ LI+G C+ G L A + M+S G+ + + + SM+ C+ +
Sbjct: 242 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKK 300
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 157/310 (50%), Gaps = 4/310 (1%)
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVS 229
+P+ +TF ++ LC G V QA+ + + P Y T+++GLCK G + A++
Sbjct: 7 RPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALN 62
Query: 230 LLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
LL +M+ + ++N +I LCK G I A L M KG P+ +TY+ ++D C
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEY 349
R G+ A LL M+ + P+ VTF L++ VK+G+ S+ + + RG
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI 182
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
Y+S+I G K+ + A ++ M K C P+ V +S LI+G C+ + D E EM
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 242
Query: 410 KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKL 469
+G + N+ TY++L+ GF + GD A + M ++ N + + ++ LC +L
Sbjct: 243 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKEL 302
Query: 470 MEAMMVWKQM 479
+A + + +
Sbjct: 303 RKAFAILEDL 312
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 163/311 (52%), Gaps = 6/311 (1%)
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G P+ F L++ LC +G +++A LVD M +G P Y T+++GLC+ G A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
++LL++M + V + ++ K G ++ + ++G + YS +I
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
+ G++ A QL ++M+E+ P+ V +SALI+ L +EGK EA E +M +G P
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
+ TY+S++ GF + + A + M + SC+ + V +S LING CK ++ M ++
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 478 QMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQ 537
+M RGI + V Y+++IHGFC +D L N M+ + + P+ T+ +L +
Sbjct: 241 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMI--SSGVAPNYITFQSMLASLCS 298
Query: 538 QNNISRAMDVL 548
+ + +A +L
Sbjct: 299 KKELRKAFAIL 309
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 157/297 (52%), Gaps = 7/297 (2%)
Query: 119 KAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNL 178
+A+ L RM E H + + +++N + + G AL S + + +I+ + + +N
Sbjct: 28 QALALVDRMVEEGH-----QPYGTIINGLCKMGDTESALNLLSKM-EETHIKAHVVIYNA 81
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG 238
+I LCK G A +F +H + PD TYS ++D C+ GR +A LL +M
Sbjct: 82 IIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQ 141
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAV 298
P+ F+ LI+AL K+G + A ++ +M +G P +TYN+++DG C++ +LN A
Sbjct: 142 INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAK 201
Query: 299 SLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGL 358
+L+ M + C P+ VTF TL++G+ K R +G + + RG N Y++LI G
Sbjct: 202 RMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 261
Query: 359 FKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM-KNKGH 414
+ G + A L M+ G PN + + +++ LC + + +A L ++ K++GH
Sbjct: 262 CQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEGH 318
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 168/324 (51%), Gaps = 5/324 (1%)
Query: 130 EFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLV 189
E C+ V +F +++N + EG +AL + + + QP G +I LCK+G
Sbjct: 3 ETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGH-QPYGT----IINGLCKMGDT 57
Query: 190 DQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVL 249
+ A+ + + + Y+ ++D LCK+G A +L EM +G FP+ ++ +
Sbjct: 58 ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117
Query: 250 ISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC 309
I + C+ G A +L+ +M + P+ VT++ L++ L ++GK+++A + M+
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177
Query: 310 VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
P +T+ +++ GF KQ R +D +L S+ + + +S+LI+G K + ++ M+
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF 429
++ EM +G NTV Y+ LI G C+ G D A++ L M + G PN T+ S++
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297
Query: 430 EAGDCHKAILVWKEMKNNSCNHNE 453
+ KA + ++++ + +H E
Sbjct: 298 SKKELRKAFAILEDLQKSEGHHLE 321
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 127/259 (49%), Gaps = 27/259 (10%)
Query: 374 MMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGD 433
M+E GC P+ V ++ L++GLC EG+ +A + M +GH P Y +++ G + GD
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 434 CHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSS 493
A+ + +M+ + V Y+ +I+ LCK+G + A ++ +M +GI DV+ YS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 494 MIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLD 553
MI FC + +L M+ E ++ PDV T++ L+NA ++ +S A ++ ML
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMI--ERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLR 174
Query: 554 QGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLL 613
+G P IT N DG K+ R A ++++ M +
Sbjct: 175 RGIFPTTIT-----------YNSMIDG----------FCKQDRLNDAKRMLDSMASKSCS 213
Query: 614 PEASTWAIVVQQLCKPRNI 632
P+ T++ ++ CK + +
Sbjct: 214 PDVVTFSTLINGYCKAKRV 232
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 195/391 (49%), Gaps = 8/391 (2%)
Query: 124 FHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKAL 183
+RME K V +FN ++NV+ +EG +A F + + I+P +T+N +++
Sbjct: 216 MYRME----IKSNVYTFNIMINVLCKEGKLKKAKGFLG-IMEVFGIKPTIVTYNTLVQGF 270
Query: 184 CKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNP 243
G ++ A + + + PD TY+ ++ +C EGR E +L EM+ G P+
Sbjct: 271 SLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDS 327
Query: 244 FVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQ 303
+N+LI GDL A D M +G VP TYNTL+ GL + K+ A L+ +
Sbjct: 328 VSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIRE 387
Query: 304 MVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGK 363
+ V + VT+ L++G+ + G A ++ + G + ++ Y+SLI L ++ K
Sbjct: 388 IREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNK 447
Query: 364 FEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSS 423
A +L+++++ KG +P+ V+ + L+DG C G D A L EM P+ TY+
Sbjct: 448 TREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNC 507
Query: 424 LMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRG 483
LMRG G +A + EMK + + Y+ LI+G K G A MV +MLS G
Sbjct: 508 LMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLG 567
Query: 484 IKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
++ Y++++ G Q + +L +M
Sbjct: 568 FNPTLLTYNALLKGLSKNQEGELAEELLREM 598
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 201/394 (51%), Gaps = 5/394 (1%)
Query: 174 LTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDE 233
+ F+L+++ C++ +VD+A+E F + + P + T + ++ L + RI+ A +
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 234 MQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGK 293
M N + FN++I+ LCK+G L +A + M + G P VTYNTLV G +G+
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 294 LNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSS 353
+ A ++++M + P+ T+ ++ +GRAS+ VL ++E G + Y+
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNI 332
Query: 354 LISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKG 413
LI G G E A EM+++G P Y+ LI GL E K + A + E++ KG
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392
Query: 414 HLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAM 473
+ +S TY+ L+ G+ + GD KA + EM + + Y+ LI LC+ K EA
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452
Query: 474 MVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLN 533
++++++ +G+K D+V ++++ G C +D+ L +M + PD TYN L+
Sbjct: 453 ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM--DMMSINPDDVTYNCLMR 510
Query: 534 AFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
+ A +++ M +G PD I+ + +
Sbjct: 511 GLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 544
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 196/385 (50%), Gaps = 9/385 (2%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+KA ME F K T+ ++N+++ G A S + KS QP+ T+N
Sbjct: 242 KKAKGFLGIMEV-FGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM-KSKGFQPDMQTYN 299
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
++ +C G +A EV R + PDS +Y+ L+ G G ++ A + DEM +
Sbjct: 300 PILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQ 356
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G P + +N LI L + + A L+ + KG V + VTYN L++G C+ G KA
Sbjct: 357 GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKA 416
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
+L ++M+ + P T+ +L++ ++ + + + + +G + + + ++L+ G
Sbjct: 417 FALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDG 476
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
G + A L KEM P+ V Y+ L+ GLC EGK +EARE + EMK +G P+
Sbjct: 477 HCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPD 536
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKN--GKLMEAMMV 475
+Y++L+ G+ + GD A +V EM + N + Y+ L+ GL KN G+L E ++
Sbjct: 537 HISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELL- 595
Query: 476 WKQMLSRGIKLDVVAYSSMIHGFCN 500
++M S GI + ++ S+I N
Sbjct: 596 -REMKSEGIVPNDSSFCSVIEAMSN 619
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 195/430 (45%), Gaps = 34/430 (7%)
Query: 162 HVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKE 221
++ K P T N ++ L ++ ++ A + ++ + YT++ +++ LCKE
Sbjct: 179 YLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKE 238
Query: 222 GRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLI--------------------- 260
G++ +A L M++ G P +N L+ +G +
Sbjct: 239 GKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTY 298
Query: 261 -----------RAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC 309
RA++++ M G VP+ V+YN L+ G G L A + ++MV
Sbjct: 299 NPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGM 358
Query: 310 VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
VP T+ TL+HG + + ++ + E+G + Y+ LI+G + G + A
Sbjct: 359 VPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFA 418
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF 429
L EMM G +P Y++LI LCR+ K EA E ++ KG P+ ++LM G
Sbjct: 419 LHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHC 478
Query: 430 EAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVV 489
G+ +A + KEM S N ++V Y+ L+ GLC GK EA + +M RGIK D +
Sbjct: 479 AIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI 538
Query: 490 AYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLN 549
+Y+++I G+ + ++ML P + TYN LL + A ++L
Sbjct: 539 SYNTLISGYSKKGDTKHAFMVRDEML--SLGFNPTLLTYNALLKGLSKNQEGELAEELLR 596
Query: 550 IMLDQGCDPD 559
M +G P+
Sbjct: 597 EMKSEGIVPN 606
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 124/271 (45%), Gaps = 21/271 (7%)
Query: 382 NTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVW 441
+T+++ L+ C+ DEA E MK KG P + T + ++ A + +
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213
Query: 442 KEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNA 501
+M N ++I+IN LCK GKL +A M GIK +V Y++++ GF
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 502 QLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFI 561
++ + ++M + QPD+ TYN +L+ N RA +VL M + G PD +
Sbjct: 274 GRIEGARLIISEM--KSKGFQPDMQTYNPILSWMC---NEGRASEVLREMKEIGLVPDSV 328
Query: 562 TCDIFLKTLRDNMNPPQDGREFLDELVVR---------------LVKRQRTIGASKIIEV 606
+ +I ++ +N + + + DE+V + L + A +I
Sbjct: 329 SYNILIRGCSNNGD-LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIRE 387
Query: 607 MLDRCLLPEASTWAIVVQQLCKPRNIRKAIS 637
+ ++ ++ ++ T+ I++ C+ + +KA +
Sbjct: 388 IREKGIVLDSVTYNILINGYCQHGDAKKAFA 418
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 213/451 (47%), Gaps = 43/451 (9%)
Query: 167 LNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDE 226
L ++P+ +N VI AL K +D A F+ + C PD +TY+ L+ G+CK+G +DE
Sbjct: 174 LGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDE 233
Query: 227 AVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVD 286
A+ L+ +M+ EG PN F + +LI G + A K ++ M ++ PNE T T V
Sbjct: 234 AIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVH 293
Query: 287 GLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGH-- 344
G+ R KA +L + V + +++ A + L + ERG+
Sbjct: 294 GIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIP 353
Query: 345 -------------RGNEYI--------------------YSSLISGLFKEGKFEHAMQLW 371
+G++ + Y L+ L +F +
Sbjct: 354 DSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYL 413
Query: 372 KEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEA 431
K+M G + Y+A+ID LC+ + + A +L EM+++G PN T+++ + G+
Sbjct: 414 KQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVR 473
Query: 432 GDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAY 491
GD K V +++ + + + +S++IN LC+ ++ +A +K+ML GI+ + + Y
Sbjct: 474 GDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITY 533
Query: 492 SSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIM 551
+ +I C+ D+ +KLF +M +E L PD+ YN + +F + + +A ++L M
Sbjct: 534 NILIRSCCSTGDTDRSVKLFAKM--KENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTM 591
Query: 552 LDQGCDPDFITCDIFLKTLRDNMNPPQDGRE 582
L G PD T +K L ++ GRE
Sbjct: 592 LRIGLKPDNFTYSTLIKALSES------GRE 616
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 185/412 (44%), Gaps = 16/412 (3%)
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G P+ ++N +I AL K L A M GC P+ TYN L+ G+C+KG +++A
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
+ L+ QM PN T+ L+ GF+ GR + L + R NE + + G
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHG 294
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
+F+ A ++ MEK V Y A++ L A E ++L ++ +G++P+
Sbjct: 295 IFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPD 354
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
S T+++ M + D + ++ + Y +L+ L + E K
Sbjct: 355 SSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLK 414
Query: 478 QMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQ 537
QM G+ V +Y+++I C A+ ++ +M Q+ + P++ T+N L+ +
Sbjct: 415 QMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEM--QDRGISPNLVTFNTFLSGYSV 472
Query: 538 QNNISRAMDVLNIMLDQGCDPDFITCDIFL------KTLRDNMNPPQDGREF---LDELV 588
+ ++ + VL +L G PD IT + + K ++D + ++ E+ +E+
Sbjct: 473 RGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEIT 532
Query: 589 VRLVKRQ-----RTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKA 635
++ R T + K+ M + L P+ + +Q CK R ++KA
Sbjct: 533 YNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKA 584
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 154/354 (43%), Gaps = 23/354 (6%)
Query: 282 NTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEE 341
+ L + L RKG L ++ LL ++ + +D L+ + + G A V +
Sbjct: 114 SVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISF 173
Query: 342 RGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADE 401
G + + +Y+++I L K + A +++M GC+P+ Y+ LI G+C++G DE
Sbjct: 174 LGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDE 233
Query: 402 AREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILIN 461
A + +M+ +G+ PN FTY+ L+ GF AG +A+ + M+ N NE ++
Sbjct: 234 AIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVH 293
Query: 462 GLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAEL 521
G+ + +A V + + L V Y ++++ N + + + ++ E
Sbjct: 294 GIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKI--GERGY 351
Query: 522 QPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGR 581
PD +T+N ++ + +++ + + + +G P F +
Sbjct: 352 IPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLV---------------- 395
Query: 582 EFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKA 635
LV L+ QR + ++ M LL ++ V+ LCK R I A
Sbjct: 396 -----LVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENA 444
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 140/295 (47%), Gaps = 18/295 (6%)
Query: 347 NEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYL 406
++ + S L + LF++G +M+L KE+ + G + + LI R G A +
Sbjct: 109 DQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVF 168
Query: 407 IEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKN 466
++ G P++ Y++++ ++ A L +++M+++ C + Y+ILI+G+CK
Sbjct: 169 AQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKK 228
Query: 467 GKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVA 526
G + EA+ + KQM G + +V Y+ +I GF A VD+ +K M + +L P+ A
Sbjct: 229 GVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVR--KLNPNEA 286
Query: 527 TYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDE 586
T ++ ++ +A +VL +++ + + D L L +N + G +FL +
Sbjct: 287 TIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETG-QFLRK 345
Query: 587 LVVR---------------LVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQL 626
+ R L+K + +I + + R + P + + ++VQ L
Sbjct: 346 IGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQAL 400
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 134 KQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAV 193
K V +F+ ++N + + A + + + + I+PN +T+N++I++ C G D++V
Sbjct: 492 KPDVITFSLIINCLCRAKEIKDAFDCFKEMLE-WGIEPNEITYNILIRSCCSTGDTDRSV 550
Query: 194 EVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISAL 253
++F + +PD Y Y+ + CK ++ +A LL M G P+ F ++ LI AL
Sbjct: 551 KLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKAL 610
Query: 254 CKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNK 296
+ G A ++ ++ GCVP+ T + + RK L++
Sbjct: 611 SESGRESEAREMFSSIERHGCVPDSYTKRLVEELDLRKSGLSR 653
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 206/451 (45%), Gaps = 71/451 (15%)
Query: 154 HRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDS----- 208
H F+ LNI+ + T+NL+ ++LCK GL D A ++F + +P++
Sbjct: 84 HIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGF 143
Query: 209 ----------------------------YTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTF 240
++L++ L K R+++A+ L DE +
Sbjct: 144 LVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSC 203
Query: 241 PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSL 300
+ FN+LI LC G +A +L+ MS GC P+ VTYNTL+ G C+ +LNKA +
Sbjct: 204 NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 301 LNQMVANK-CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
+ + C P+ VT+ +++ G+ K G+ + +S+L + G ++ L+ G
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 360 KEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSF 419
K G+ A ++ +M+ GC P+ V +++LIDG CR G+ + EM +G PN+F
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF 383
Query: 420 TYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM 479
T YSILIN LC +L++A + Q+
Sbjct: 384 T-----------------------------------YSILINALCNENRLLKARELLGQL 408
Query: 480 LSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQN 539
S+ I Y+ +I GFC A V++ + +M ++ + +PD T+ IL+ +
Sbjct: 409 ASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM--EKKKCKPDKITFTILIIGHCMKG 466
Query: 540 NISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
+ A+ + + M+ GC PD IT L L
Sbjct: 467 RMFEAVSIFHKMVAIGCSPDKITVSSLLSCL 497
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 196/386 (50%), Gaps = 15/386 (3%)
Query: 108 FKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSL 167
F GK HF L E E C NS+LN +++ A++ + + L
Sbjct: 148 FAEKGKLHFATAL--LLQSFEVEGCCMVV----NSLLNTLVKLDRVEDAMKLFD---EHL 198
Query: 168 NIQP--NGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
Q + TFN++I+ LC VG ++A+E+ + C PD TY+TL+ G CK ++
Sbjct: 199 RFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELN 258
Query: 226 EAVSLLDEMQIEGTF--PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNT 283
+A + +++ G+ P+ + +IS CK G + A+ L+D+M G P VT+N
Sbjct: 259 KASEMFKDVK-SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 284 LVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERG 343
LVDG + G++ A + +M++ C P+ VTF +L+ G+ + G+ S G + + RG
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 344 HRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAR 403
N + YS LI+ L E + A +L ++ K P +Y+ +IDG C+ GK +EA
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAN 437
Query: 404 EYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGL 463
+ EM+ K P+ T++ L+ G G +A+ ++ +M C+ +++ S L++ L
Sbjct: 438 VIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCL 497
Query: 464 CKNGKLMEAMMVWKQMLSRGIKLDVV 489
K G EA + Q+ +G +VV
Sbjct: 498 LKAGMAKEAYHL-NQIARKGQSNNVV 522
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 146/279 (52%), Gaps = 2/279 (0%)
Query: 106 VIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCK 165
+ + + K++ KA +F +++ C V ++ S+++ + G A + +
Sbjct: 246 TLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLR 305
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
L I P +TFN+++ K G + A E+ + C PD T+++L+DG C+ G++
Sbjct: 306 -LGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVS 364
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
+ L +EM G FPN F +++LI+ALC + L++A +L+ ++ K +P YN ++
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVI 424
Query: 286 DGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR 345
DG C+ GK+N+A ++ +M KC P+ +TF L+ G +GR + S+ + G
Sbjct: 425 DGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCS 484
Query: 346 GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTV 384
++ SSL+S L K G + A L ++ KG N V
Sbjct: 485 PDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSNNVV 522
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 156/375 (41%), Gaps = 62/375 (16%)
Query: 280 TYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISL 339
TYN L LC+ G + A + M ++ PN+ G LV F ++G+ ++L+
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 340 EERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKA 399
E G + +SL++ L K + E AM+L+ E + C + K
Sbjct: 165 FEV--EGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQS--------------CNDTK- 207
Query: 400 DEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSIL 459
T++ L+RG G KA+ + M C + V Y+ L
Sbjct: 208 --------------------TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 460 INGLCKNGKLMEAMMVWKQMLSRGI-KLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQE 518
I G CK+ +L +A ++K + S + DVV Y+SMI G+C A + + L + ML
Sbjct: 248 IQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDML--R 305
Query: 519 AELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDN---MN 575
+ P T+N+L++ + + + A ++ M+ GC PD +T +L D +
Sbjct: 306 LGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVT----FTSLIDGYCRVG 361
Query: 576 PPQDGREFLDELVVR---------------LVKRQRTIGASKIIEVMLDRCLLPEASTWA 620
G +E+ R L R + A +++ + + ++P+ +
Sbjct: 362 QVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYN 421
Query: 621 IVVQQLCKPRNIRKA 635
V+ CK + +A
Sbjct: 422 PVIDGFCKAGKVNEA 436
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 206/451 (45%), Gaps = 71/451 (15%)
Query: 154 HRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDS----- 208
H F+ LNI+ + T+NL+ ++LCK GL D A ++F + +P++
Sbjct: 84 HIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGF 143
Query: 209 ----------------------------YTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTF 240
++L++ L K R+++A+ L DE +
Sbjct: 144 LVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSC 203
Query: 241 PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSL 300
+ FN+LI LC G +A +L+ MS GC P+ VTYNTL+ G C+ +LNKA +
Sbjct: 204 NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 301 LNQMVANK-CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
+ + C P+ VT+ +++ G+ K G+ + +S+L + G ++ L+ G
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 360 KEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSF 419
K G+ A ++ +M+ GC P+ V +++LIDG CR G+ + EM +G PN+F
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF 383
Query: 420 TYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM 479
T YSILIN LC +L++A + Q+
Sbjct: 384 T-----------------------------------YSILINALCNENRLLKARELLGQL 408
Query: 480 LSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQN 539
S+ I Y+ +I GFC A V++ + +M ++ + +PD T+ IL+ +
Sbjct: 409 ASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM--EKKKCKPDKITFTILIIGHCMKG 466
Query: 540 NISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
+ A+ + + M+ GC PD IT L L
Sbjct: 467 RMFEAVSIFHKMVAIGCSPDKITVSSLLSCL 497
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 196/386 (50%), Gaps = 15/386 (3%)
Query: 108 FKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSL 167
F GK HF L E E C NS+LN +++ A++ + + L
Sbjct: 148 FAEKGKLHFATAL--LLQSFEVEGCCMVV----NSLLNTLVKLDRVEDAMKLFD---EHL 198
Query: 168 NIQP--NGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
Q + TFN++I+ LC VG ++A+E+ + C PD TY+TL+ G CK ++
Sbjct: 199 RFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELN 258
Query: 226 EAVSLLDEMQIEGTF--PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNT 283
+A + +++ G+ P+ + +IS CK G + A+ L+D+M G P VT+N
Sbjct: 259 KASEMFKDVK-SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 284 LVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERG 343
LVDG + G++ A + +M++ C P+ VTF +L+ G+ + G+ S G + + RG
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 344 HRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAR 403
N + YS LI+ L E + A +L ++ K P +Y+ +IDG C+ GK +EA
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAN 437
Query: 404 EYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGL 463
+ EM+ K P+ T++ L+ G G +A+ ++ +M C+ +++ S L++ L
Sbjct: 438 VIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCL 497
Query: 464 CKNGKLMEAMMVWKQMLSRGIKLDVV 489
K G EA + Q+ +G +VV
Sbjct: 498 LKAGMAKEAYHL-NQIARKGQSNNVV 522
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 146/279 (52%), Gaps = 2/279 (0%)
Query: 106 VIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCK 165
+ + + K++ KA +F +++ C V ++ S+++ + G A + +
Sbjct: 246 TLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLR 305
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
L I P +TFN+++ K G + A E+ + C PD T+++L+DG C+ G++
Sbjct: 306 -LGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVS 364
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
+ L +EM G FPN F +++LI+ALC + L++A +L+ ++ K +P YN ++
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVI 424
Query: 286 DGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR 345
DG C+ GK+N+A ++ +M KC P+ +TF L+ G +GR + S+ + G
Sbjct: 425 DGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCS 484
Query: 346 GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTV 384
++ SSL+S L K G + A L ++ KG N V
Sbjct: 485 PDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSNNVV 522
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 156/375 (41%), Gaps = 62/375 (16%)
Query: 280 TYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISL 339
TYN L LC+ G + A + M ++ PN+ G LV F ++G+ ++L+
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 340 EERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKA 399
E G + +SL++ L K + E AM+L+ E + C + K
Sbjct: 165 FEV--EGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQS--------------CNDTK- 207
Query: 400 DEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSIL 459
T++ L+RG G KA+ + M C + V Y+ L
Sbjct: 208 --------------------TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 460 INGLCKNGKLMEAMMVWKQMLSRGI-KLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQE 518
I G CK+ +L +A ++K + S + DVV Y+SMI G+C A + + L + ML
Sbjct: 248 IQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDML--R 305
Query: 519 AELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDN---MN 575
+ P T+N+L++ + + + A ++ M+ GC PD +T +L D +
Sbjct: 306 LGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVT----FTSLIDGYCRVG 361
Query: 576 PPQDGREFLDELVVR---------------LVKRQRTIGASKIIEVMLDRCLLPEASTWA 620
G +E+ R L R + A +++ + + ++P+ +
Sbjct: 362 QVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYN 421
Query: 621 IVVQQLCKPRNIRKA 635
V+ CK + +A
Sbjct: 422 PVIDGFCKAGKVNEA 436
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 187/374 (50%), Gaps = 8/374 (2%)
Query: 206 PDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFV------FNVLISALCKKGDL 259
PD T L++ LCK R+DEA+ + ++M+ + T + FN LI LCK G L
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 260 IRAAKLVDNMSLKG-CVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
A +L+ M L+ C PN VTYN L+DG CR GKL A ++++M ++ PN VT T
Sbjct: 387 KEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 319 LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG 378
+V G + + + +E+ G +GN Y +LI E AM +++M+E G
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 379 CEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAI 438
C P+ +Y ALI GLC+ + +A + ++K G + Y+ L+ F + + K
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVY 566
Query: 439 LVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGF 498
+ +M+ + + Y+ LI+ K+ + +QM G+ V Y ++I +
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Query: 499 CNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDP 558
C+ +D+ +KLF M +++ P+ YNIL+NAF + N +A+ + M + P
Sbjct: 627 CSVGELDEALKLFKDMGLH-SKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRP 685
Query: 559 DFITCDIFLKTLRD 572
+ T + K L +
Sbjct: 686 NVETYNALFKCLNE 699
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/548 (23%), Positives = 249/548 (45%), Gaps = 45/548 (8%)
Query: 51 IFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQ------------------QM 92
+F + + GSY L +SF+ ++ A S EE L ++
Sbjct: 80 VFSQITRRLGSYSLA-ISFFEYLD--AKSQSLKRREESLSLALQSVIEFAGSEPDPRDKL 136
Query: 93 KRERRVFIEKNFIV-------IFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLN 145
R + EKN + + + +G+ ++V ++ R+++ Q N V++
Sbjct: 137 LRLYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVR---NVVVD 193
Query: 146 VIIQEGHFHRALEFYSHVCKSLNI-QPNGLTFNLVIKALCKVGLV--DQAVEVFRGIHLR 202
V+++ G A + + + ++ PN +T ++V+ + K L+ ++ + +
Sbjct: 194 VLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSH 253
Query: 203 NCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRA 262
+P+S + + LCK R + A +L ++ T FN L+S L + D+ R
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 263 AKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV------ANKCVPNDVTF 316
LV M P+ VT L++ LC+ ++++A+ + +M N + + F
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHF 373
Query: 317 GTLVHGFVKQGRASDGASVLI--SLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEM 374
TL+ G K GR + +L+ LEER N Y+ LI G + GK E A ++ M
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCA-PNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 375 MEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDC 434
E +PN V + ++ G+CR + A + ++M+ +G N TY +L+ +
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 435 HKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSM 494
KA+ +++M C+ + Y LI+GLC+ + +A+ V +++ G LD++AY+ +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 495 IHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQ 554
I FC+ ++ ++ M ++ +PD TYN L++ F + + ++ M +
Sbjct: 553 IGLFCDKNNTEKVYEMLTDM--EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 555 GCDPDFIT 562
G DP T
Sbjct: 611 GLDPTVTT 618
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 186/409 (45%), Gaps = 14/409 (3%)
Query: 69 FYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFI---VIFKAYGKAHFPEKAVNLFH 125
F +L+ L + D + + +L+ +M V I + + ++ K+ ++A+ +F
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDE---VKIRPDVVTLGILINTLCKSRRVDEALEVFE 353
Query: 126 RMEAEFH-----CKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVI 180
+M + K FN++++ + + G A E + PN +T+N +I
Sbjct: 354 KMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLI 413
Query: 181 KALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTF 240
C+ G ++ A EV + P+ T +T++ G+C+ ++ AV +M+ EG
Sbjct: 414 DGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVK 473
Query: 241 PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSL 300
N + LI A C ++ +A + M GC P+ Y L+ GLC+ + + A+ +
Sbjct: 474 GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV 533
Query: 301 LNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFK 360
+ ++ + + + L+ F + +L +E+ G + + Y++LIS K
Sbjct: 534 VEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Query: 361 EGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL-PNSF 419
FE ++ ++M E G +P Y A+ID C G+ DEA + +M + PN+
Sbjct: 594 HKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTV 653
Query: 420 TYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGK 468
Y+ L+ F + G+ +A+ + +EMK N Y+ L C N K
Sbjct: 654 IYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFK--CLNEK 700
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 161/355 (45%), Gaps = 2/355 (0%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
++A L RM+ E C ++N +++ + G A E S + K I+PN +T N
Sbjct: 387 KEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM-KEDEIKPNVVTVN 445
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
++ +C+ ++ AV F + + TY TL+ C +++A+ ++M
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G P+ ++ LIS LC+ A ++V+ + G + + YN L+ C K K
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKV 565
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
+L M P+ +T+ TL+ F K ++ + E G Y ++I
Sbjct: 566 YEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA 625
Query: 358 LFKEGKFEHAMQLWKEM-MEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLP 416
G+ + A++L+K+M + PNTV+Y+ LI+ + G +A EMK K P
Sbjct: 626 YCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRP 685
Query: 417 NSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLME 471
N TY++L + E + + EM SC N++ IL+ L + +L++
Sbjct: 686 NVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVK 740
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 166/365 (45%), Gaps = 4/365 (1%)
Query: 63 KLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEK-NFIVIFKAYGKAHFPEKAV 121
K + F +LI+ L EELL +MK E R + + Y +A E A
Sbjct: 367 KADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAK 426
Query: 122 NLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIK 181
+ RM+ E K V + N+++ + + + A+ F+ + K ++ N +T+ +I
Sbjct: 427 EVVSRMK-EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE-GVKGNVVTYMTLIH 484
Query: 182 ALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFP 241
A C V V++A+ + + C+PD+ Y L+ GLC+ R +A+ ++++++ G
Sbjct: 485 ACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSL 544
Query: 242 NPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLL 301
+ +N+LI C K + + +++ +M +G P+ +TYNTL+ + ++
Sbjct: 545 DLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM 604
Query: 302 NQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGH-RGNEYIYSSLISGLFK 360
QM + P T+G ++ + G + + + N IY+ LI+ K
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Query: 361 EGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFT 420
G F A+ L +EM K PN Y+AL L + + + + + EM + PN T
Sbjct: 665 LGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQIT 724
Query: 421 YSSLM 425
LM
Sbjct: 725 MEILM 729
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 1/214 (0%)
Query: 58 KWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFP 117
K G + L L++ LI ++ + E+L M++E + + + +GK
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
E + +M E TV ++ +V++ G AL+ + + + PN + +N
Sbjct: 598 ESVERMMEQMR-EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYN 656
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
++I A K+G QA+ + + ++ P+ TY+ L L ++ + + + L+DEM +
Sbjct: 657 ILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQ 716
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSL 271
PN +L+ L +L++ K + S+
Sbjct: 717 SCEPNQITMEILMERLSGSDELVKLRKFMQGYSV 750
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 224/458 (48%), Gaps = 9/458 (1%)
Query: 50 EIFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFK 109
++F+ ++ SY + ++I+ L S+ ++ ++++MK + + F + +
Sbjct: 30 KLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIR 89
Query: 110 AYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNI 169
+ +A E A++LF + EF+C SF+++L +++E A + C +
Sbjct: 90 TFSRAGRLEDAISLFKSLH-EFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEV 148
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVS 229
NL++K LC+V D A +VF+ ++ + C PD +Y LM G C EG+++EA
Sbjct: 149 NSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATH 208
Query: 230 LLDEM----QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
LL M +G+ + V+ +L+ ALC G++ A +++ + KG + Y+ +
Sbjct: 209 LLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIE 268
Query: 286 DGLCRKGK--LNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERG 343
G + + LL + + +P ++ + ++G+ +G VL+++ +G
Sbjct: 269 AGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKG 328
Query: 344 HRGNEYIYSSLISGLFKEGKFEHAMQLW-KEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
+IY + + L + GK + A+ + KEMM+ C P VY+ LI GLC +GK+ EA
Sbjct: 329 FEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEA 388
Query: 403 REYLIEM-KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILIN 461
YL +M K + N TY +L+ G G +A V +EM S Y ++I
Sbjct: 389 VGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIK 448
Query: 462 GLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFC 499
GLC + EA+M ++M+S+ + + + ++ C
Sbjct: 449 GLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 188/466 (40%), Gaps = 75/466 (16%)
Query: 175 TFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEM 234
F VI+ + G ++ A+ +F+ +H NC S ++ TL+ + KE ++ A + +
Sbjct: 83 VFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKY 142
Query: 235 QIEGTFPNPFV--FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKG 292
G N + N+L+ LC+ A+++ M+ +GC P+ +Y L+ G C +G
Sbjct: 143 -CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEG 201
Query: 293 KLNKAVSLLNQM---VANKCVPND-VTFGTLVHGFVKQGRASDGASVLISLEERGHRGNE 348
KL +A LL M ++ K D V + L+ G D +L + +G + +
Sbjct: 202 KLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPK 261
Query: 349 YIYSSLISGLFKEGK--FEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYL 406
Y + +G ++ E +L E + +G P YSA+ L EGK E E L
Sbjct: 262 RCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVL 321
Query: 407 IEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKN 466
+ M++KG P F Y + + LC+
Sbjct: 322 LAMRSKGFEPTPFIYGAK-----------------------------------VKALCRA 346
Query: 467 GKLMEAMMVWKQMLSRGIKLDVVA-YSSMIHGFCN----AQLVDQGMKLFNQMLCQEAEL 521
GKL EA+ V + + +G L V Y+ +I G C+ + V K+ Q+ C E
Sbjct: 347 GKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANE- 405
Query: 522 QPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGR 581
TY L++ + A V+ ML + P T + +K L D
Sbjct: 406 ----ETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCD--------- 452
Query: 582 EFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLC 627
R A +E M+ + ++PE+S W + + +C
Sbjct: 453 ------------MDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 224/458 (48%), Gaps = 9/458 (1%)
Query: 50 EIFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFK 109
++F+ ++ SY + ++I+ L S+ ++ ++++MK + + F + +
Sbjct: 30 KLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIR 89
Query: 110 AYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNI 169
+ +A E A++LF + EF+C SF+++L +++E A + C +
Sbjct: 90 TFSRAGRLEDAISLFKSLH-EFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEV 148
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVS 229
NL++K LC+V D A +VF+ ++ + C PD +Y LM G C EG+++EA
Sbjct: 149 NSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATH 208
Query: 230 LLDEM----QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
LL M +G+ + V+ +L+ ALC G++ A +++ + KG + Y+ +
Sbjct: 209 LLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIE 268
Query: 286 DGLCRKGK--LNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERG 343
G + + LL + + +P ++ + ++G+ +G VL+++ +G
Sbjct: 269 AGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKG 328
Query: 344 HRGNEYIYSSLISGLFKEGKFEHAMQLW-KEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
+IY + + L + GK + A+ + KEMM+ C P VY+ LI GLC +GK+ EA
Sbjct: 329 FEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEA 388
Query: 403 REYLIEM-KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILIN 461
YL +M K + N TY +L+ G G +A V +EM S Y ++I
Sbjct: 389 VGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIK 448
Query: 462 GLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFC 499
GLC + EA+M ++M+S+ + + + ++ C
Sbjct: 449 GLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 188/466 (40%), Gaps = 75/466 (16%)
Query: 175 TFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEM 234
F VI+ + G ++ A+ +F+ +H NC S ++ TL+ + KE ++ A + +
Sbjct: 83 VFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKY 142
Query: 235 QIEGTFPNPFV--FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKG 292
G N + N+L+ LC+ A+++ M+ +GC P+ +Y L+ G C +G
Sbjct: 143 -CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEG 201
Query: 293 KLNKAVSLLNQM---VANKCVPND-VTFGTLVHGFVKQGRASDGASVLISLEERGHRGNE 348
KL +A LL M ++ K D V + L+ G D +L + +G + +
Sbjct: 202 KLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPK 261
Query: 349 YIYSSLISGLFKEGK--FEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYL 406
Y + +G ++ E +L E + +G P YSA+ L EGK E E L
Sbjct: 262 RCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVL 321
Query: 407 IEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKN 466
+ M++KG P F Y + + LC+
Sbjct: 322 LAMRSKGFEPTPFIYGAK-----------------------------------VKALCRA 346
Query: 467 GKLMEAMMVWKQMLSRGIKLDVVA-YSSMIHGFCN----AQLVDQGMKLFNQMLCQEAEL 521
GKL EA+ V + + +G L V Y+ +I G C+ + V K+ Q+ C E
Sbjct: 347 GKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANE- 405
Query: 522 QPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGR 581
TY L++ + A V+ ML + P T + +K L D
Sbjct: 406 ----ETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCD--------- 452
Query: 582 EFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLC 627
R A +E M+ + ++PE+S W + + +C
Sbjct: 453 ------------MDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 198/400 (49%), Gaps = 18/400 (4%)
Query: 149 QEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDS 208
Q G+FH VCKS+ +++ + + G V +E R + P+
Sbjct: 124 QPGYFHS-----YEVCKSMV---------MILSKMRQFGAVWGLIEEMRKTNPELIEPEL 169
Query: 209 YTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDN 268
+ LM + +AV +LDEM G P+ +VF L+ ALCK G + A+K+ ++
Sbjct: 170 FV--VLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFED 227
Query: 269 MSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGR 328
M K PN + +L+ G CR+GKL +A +L QM P+ V F L+ G+ G+
Sbjct: 228 MREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGK 286
Query: 329 ASDGASVLISLEERGHRGNEYIYSSLISGLFK-EGKFEHAMQLWKEMMEKGCEPNTVVYS 387
+D ++ + +RG N Y+ LI L + E + + AM+++ EM GCE + V Y+
Sbjct: 287 MADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYT 346
Query: 388 ALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNN 447
ALI G C+ G D+ L +M+ KG +P+ TY +M + + + + ++MK
Sbjct: 347 ALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRR 406
Query: 448 SCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQG 507
C+ + + Y+++I CK G++ EA+ +W +M + G+ V + MI+GF + + +
Sbjct: 407 GCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEA 466
Query: 508 MKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDV 547
F +M+ + P T LLN + + + A DV
Sbjct: 467 CNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDV 506
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/499 (24%), Positives = 225/499 (45%), Gaps = 50/499 (10%)
Query: 59 WGSYKLGDLSFY----SLIEKLAASSDFASLEELLQQMKRERRVFIEKN-FIVIFKAYGK 113
W + + G Y S++ L+ F ++ L+++M++ IE F+V+ + +
Sbjct: 120 WATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFAS 179
Query: 114 AHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNG 173
A+ +KAV + M ++P+
Sbjct: 180 ANMVKKAVEVLDEM-------------------------------------PKYGLEPDE 202
Query: 174 LTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDE 233
F ++ ALCK G V +A +VF + P+ +++L+ G C+EG++ EA +L +
Sbjct: 203 YVFGCLLDALCKNGSVKEASKVFEDMR-EKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQ 261
Query: 234 MQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGK 293
M+ G P+ VF L+S G + A L+++M +G PN Y L+ LCR K
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEK 321
Query: 294 -LNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYS 352
+++A+ + +M C + VT+ L+ GF K G G SVL + ++G ++ Y
Sbjct: 322 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 353 SLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK 412
++ K+ +FE ++L ++M +GC P+ ++Y+ +I C+ G+ EA EM+
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Query: 413 GHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSI--LINGLCKNGKLM 470
G P T+ ++ GF G +A +KEM + ++ L+N L ++ KL
Sbjct: 442 GLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLE 501
Query: 471 EAMMVWKQMLSR--GIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATY 528
A VW + ++ +L+V A++ IH V + M+ E +L P TY
Sbjct: 502 MAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMM--EMDLMPQPNTY 559
Query: 529 NILLNAFYQQNNISRAMDV 547
L+ + N + A ++
Sbjct: 560 AKLMKGLNKLYNRTIAAEI 578
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 194/414 (46%), Gaps = 26/414 (6%)
Query: 230 LLDEM-QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGL 288
L++EM + P +F VL+ + +A +++D M G P+E + L+D L
Sbjct: 153 LIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDAL 212
Query: 289 CRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNE 348
C+ G + +A + M K PN F +L++G+ ++G+ + VL+ ++E G +
Sbjct: 213 CKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDI 271
Query: 349 YIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCR-EGKADEAREYLI 407
++++L+SG GK A L +M ++G EPN Y+ LI LCR E + DEA +
Sbjct: 272 VVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFV 331
Query: 408 EMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNG 467
EM+ G + TY++L+ GF + G K V +M+ ++V Y ++ K
Sbjct: 332 EMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKE 391
Query: 468 KLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVAT 527
+ E + + ++M RG D++ Y+ +I C V + ++L+N+M + L P V T
Sbjct: 392 QFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEM--EANGLSPGVDT 449
Query: 528 YNILLNAFYQQNNISRAMDVLNIMLDQG--CDPDFITCDIFLKTLRDNMNPPQDGREFLD 585
+ I++N F Q + A + M+ +G P + T LK+L +N+
Sbjct: 450 FVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGT----LKSLLNNL----------- 494
Query: 586 ELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAISEC 639
VR K + I C L S W I + L ++++A S C
Sbjct: 495 ---VRDDKLEMAKDVWSCISNKTSSCEL-NVSAWTIWIHALYAKGHVKEACSYC 544
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/572 (22%), Positives = 275/572 (48%), Gaps = 38/572 (6%)
Query: 56 SHKWGSYKLGDL----SFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKN-FIVIFKA 110
+ +W S G + ++ +L KL F ++ +LL +M + + F+ I +
Sbjct: 62 TFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRG 121
Query: 111 YGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQ 170
+G+A ++ +++ + ++F K ++K FNS+L+V+++E A EF++ + I
Sbjct: 122 FGRARLIKRVISVVD-LVSKFGIKPSLKVFNSILDVLVKE-DIDIAREFFTRKMMASGIH 179
Query: 171 PNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSL 230
+ T+ +++K L + ++ + + AP++ Y+TL+ LCK G++ A SL
Sbjct: 180 GDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSL 239
Query: 231 LDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCR 290
+ EM+ PN FN+LISA C + LI++ L++ G VP+ VT +++ LC
Sbjct: 240 MSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCN 295
Query: 291 KGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYI 350
+G++++A+ +L ++ + + V TLV G+ G+ I +E +G+ N
Sbjct: 296 EGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVET 355
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
Y+ LI+G G + A+ + +M N ++ LI GL G+ D+ + L M+
Sbjct: 356 YNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQ 415
Query: 411 NKG--HLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGK 468
+ H Y+ ++ GF++ A+ +M+ + + ++ LC+ G
Sbjct: 416 DSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLI--SLCEKGG 473
Query: 469 LMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATY 528
+ + + QM+ G ++ +IH + +++ ++L N M+ + P +T+
Sbjct: 474 MDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRG--YLPRSSTF 531
Query: 529 NILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELV 588
N ++ F +Q+ + + + M ++GC PD ++ NP L+EL
Sbjct: 532 NAVIIGFCKQDKVMNGIKFVEDMAERGCVPD-----------TESYNP------LLEELC 574
Query: 589 VRLVKRQRTIGASKIIEVMLDRCLLPEASTWA 620
V+ ++ + S+++E + ++P+ S W+
Sbjct: 575 VKGDIQKAWLLFSRMVE----KSIVPDPSMWS 602
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 192/443 (43%), Gaps = 16/443 (3%)
Query: 206 PDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKL 265
PD + T++ G + I +S++D + G P+ VFN ++ L K+ I
Sbjct: 110 PDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFF 169
Query: 266 VDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVK 325
M G + TY L+ GL ++ LL M + PN V + TL+H K
Sbjct: 170 TRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCK 229
Query: 326 QGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVV 385
G+ S++ ++E N+ ++ LIS E K +M L ++ G P+ V
Sbjct: 230 NGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVT 285
Query: 386 YSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMK 445
+ +++ LC EG+ EA E L +++KG + ++L++G+ G A + EM+
Sbjct: 286 VTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEME 345
Query: 446 NNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVD 505
N Y++LI G C G L A+ + M + I+ + ++++I G D
Sbjct: 346 RKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTD 405
Query: 506 QGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIM---LDQGCDPDFIT 562
G+K+ M + + YN ++ FY++N A++ L M + D F
Sbjct: 406 DGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKL 465
Query: 563 CDIFLKTLRDNMNPPQD---GREFLDELVVR--LVKRQRTIG----ASKIIEVMLDRCLL 613
+ K D++ D G + ++V L+ R G + ++I M+ R L
Sbjct: 466 ISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYL 525
Query: 614 PEASTWAIVVQQLCKPRNIRKAI 636
P +ST+ V+ CK + I
Sbjct: 526 PRSSTFNAVIIGFCKQDKVMNGI 548
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 109/236 (46%), Gaps = 8/236 (3%)
Query: 68 SFYSLIEKLAA---SSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLF 124
+F +LI L+ + D + E++Q I+ VI+ Y + + E A+
Sbjct: 390 TFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRW-EDALEFL 448
Query: 125 HRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALC 184
+ME F + +SF L + ++G Y + + P+ + + +I
Sbjct: 449 LKMEKLFP-RAVDRSFK--LISLCEKGGMDDLKTAYDQMIGEGGV-PSIIVSHCLIHRYS 504
Query: 185 KVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPF 244
+ G +++++E+ + R P S T++ ++ G CK+ ++ + +++M G P+
Sbjct: 505 QHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTE 564
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSL 300
+N L+ LC KGD+ +A L M K VP+ +++L+ L +K ++ SL
Sbjct: 565 SYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSL 620
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 178/345 (51%), Gaps = 5/345 (1%)
Query: 176 FNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQ 235
F+ + K + A + F + P + + M L +GR+D A+ EM+
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 236 IEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLN 295
PNP+ N+++S C+ G L + +L+ +M G +V+YNTL+ G C KG L+
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 296 KAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLI 355
A+ L N M + PN VTF TL+HGF + + + + V ++ N Y++LI
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 356 SGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL 415
+G ++G E A + +++M+ G + + + Y+ALI GLC++ K +A +++ E+ + +
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 416 PNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMV 475
PNS T+S+L+ G + + ++K M + C+ NE +++L++ C+N A V
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 476 WKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAE 520
++M+ R I LD S +H CN L QG + L QE E
Sbjct: 471 LREMVRRSIPLD----SRTVHQVCNG-LKHQGKDQLVKKLLQEME 510
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 189/426 (44%), Gaps = 37/426 (8%)
Query: 192 AVEVFRGIHLRNCAPDSY-TYSTLMDGLCKEGRIDEAVSLLDEMQIEG--TFP------- 241
++E F RN S T++ ++ L K + A S+L ++ + G P
Sbjct: 98 SLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDAL 157
Query: 242 ---------NPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKG 292
P VF+ L A M G +P + N + L +G
Sbjct: 158 LYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQG 217
Query: 293 KLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYS 352
+++ A+ +M K PN T ++ G+ + G+ G +L +E G R + Y+
Sbjct: 218 RVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYN 277
Query: 353 SLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK 412
+LI+G ++G A++L M + G +PN V ++ LI G CR K EA + EMK
Sbjct: 278 TLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAV 337
Query: 413 GHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEA 472
PN+ TY++L+ G+ + GD A +++M N + + Y+ LI GLCK K +A
Sbjct: 338 NVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Query: 473 MMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILL 532
K++ + + +S++I G C + D+G +L+ M+ + P+ T+N+L+
Sbjct: 398 AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI--RSGCHPNEQTFNMLV 455
Query: 533 NAFYQQNNISRAMDVLNIMLDQGCDPDFITC------------DIFLKTLRDNMNPPQDG 580
+AF + + A VL M+ + D T D +K L M +G
Sbjct: 456 SAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM----EG 511
Query: 581 REFLDE 586
++FL E
Sbjct: 512 KKFLQE 517
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 154/351 (43%), Gaps = 37/351 (10%)
Query: 104 FIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHV 163
F +FK + A + F +M+ ++ TV+S N+ ++ ++ +G AL FY +
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMK-DYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 164 CKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGR 223
+ I PN T N+V+ C+ G +D+ +E+ + + +Y+TL+ G C++G
Sbjct: 230 -RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 224 IDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNT 283
+ A+ L + M G PN FN LI C+ L A+K+ M PN VTYNT
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 284 LV-----------------------------------DGLCRKGKLNKAVSLLNQMVANK 308
L+ GLC++ K KA + ++
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 309 CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAM 368
VPN TF L+ G + A G + S+ G NE ++ L+S + F+ A
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGAS 468
Query: 369 QLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSF 419
Q+ +EM+ + ++ + +GL +GK ++ L EM+ K L SF
Sbjct: 469 QVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESF 519
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 132/287 (45%), Gaps = 23/287 (8%)
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
++ SL KF +A + +M + G P +A + L +G+ D A + EM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 410 KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKL 469
+ PN +T + +M G+ +G K I + ++M+ +V Y+ LI G C+ G L
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 470 MEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYN 529
A+ + M G++ +VV ++++IHGFC A + + K+F +M + + P+ TYN
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM--KAVNVAPNTVTYN 347
Query: 530 ILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVV 589
L+N + QQ + A M+ G D +T + L+
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT---------------------YNALIF 386
Query: 590 RLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
L K+ +T A++ ++ + L+P +ST++ ++ C +N +
Sbjct: 387 GLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGF 433
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 178/345 (51%), Gaps = 5/345 (1%)
Query: 176 FNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQ 235
F+ + K + A + F + P + + M L +GR+D A+ EM+
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 236 IEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLN 295
PNP+ N+++S C+ G L + +L+ +M G +V+YNTL+ G C KG L+
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 296 KAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLI 355
A+ L N M + PN VTF TL+HGF + + + + V ++ N Y++LI
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 356 SGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL 415
+G ++G E A + +++M+ G + + + Y+ALI GLC++ K +A +++ E+ + +
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 416 PNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMV 475
PNS T+S+L+ G + + ++K M + C+ NE +++L++ C+N A V
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 476 WKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAE 520
++M+ R I LD S +H CN L QG + L QE E
Sbjct: 471 LREMVRRSIPLD----SRTVHQVCNG-LKHQGKDQLVKKLLQEME 510
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 189/426 (44%), Gaps = 37/426 (8%)
Query: 192 AVEVFRGIHLRNCAPDSY-TYSTLMDGLCKEGRIDEAVSLLDEMQIEG--TFP------- 241
++E F RN S T++ ++ L K + A S+L ++ + G P
Sbjct: 98 SLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDAL 157
Query: 242 ---------NPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKG 292
P VF+ L A M G +P + N + L +G
Sbjct: 158 LYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQG 217
Query: 293 KLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYS 352
+++ A+ +M K PN T ++ G+ + G+ G +L +E G R + Y+
Sbjct: 218 RVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYN 277
Query: 353 SLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK 412
+LI+G ++G A++L M + G +PN V ++ LI G CR K EA + EMK
Sbjct: 278 TLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAV 337
Query: 413 GHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEA 472
PN+ TY++L+ G+ + GD A +++M N + + Y+ LI GLCK K +A
Sbjct: 338 NVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Query: 473 MMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILL 532
K++ + + +S++I G C + D+G +L+ M+ + P+ T+N+L+
Sbjct: 398 AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI--RSGCHPNEQTFNMLV 455
Query: 533 NAFYQQNNISRAMDVLNIMLDQGCDPDFITC------------DIFLKTLRDNMNPPQDG 580
+AF + + A VL M+ + D T D +K L M +G
Sbjct: 456 SAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM----EG 511
Query: 581 REFLDE 586
++FL E
Sbjct: 512 KKFLQE 517
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 154/351 (43%), Gaps = 37/351 (10%)
Query: 104 FIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHV 163
F +FK + A + F +M+ ++ TV+S N+ ++ ++ +G AL FY +
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMK-DYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 164 CKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGR 223
+ I PN T N+V+ C+ G +D+ +E+ + + +Y+TL+ G C++G
Sbjct: 230 -RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 224 IDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNT 283
+ A+ L + M G PN FN LI C+ L A+K+ M PN VTYNT
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 284 LV-----------------------------------DGLCRKGKLNKAVSLLNQMVANK 308
L+ GLC++ K KA + ++
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 309 CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAM 368
VPN TF L+ G + A G + S+ G NE ++ L+S + F+ A
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGAS 468
Query: 369 QLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSF 419
Q+ +EM+ + ++ + +GL +GK ++ L EM+ K L SF
Sbjct: 469 QVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESF 519
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 132/287 (45%), Gaps = 23/287 (8%)
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
++ SL KF +A + +M + G P +A + L +G+ D A + EM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 410 KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKL 469
+ PN +T + +M G+ +G K I + ++M+ +V Y+ LI G C+ G L
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 470 MEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYN 529
A+ + M G++ +VV ++++IHGFC A + + K+F +M + + P+ TYN
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM--KAVNVAPNTVTYN 347
Query: 530 ILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVV 589
L+N + QQ + A M+ G D +T + L+
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT---------------------YNALIF 386
Query: 590 RLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
L K+ +T A++ ++ + L+P +ST++ ++ C +N +
Sbjct: 387 GLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGF 433
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 186/391 (47%), Gaps = 41/391 (10%)
Query: 211 YSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMS 270
+S++M LC +G++D A+ L +M G P N L++ LCK G + +A LV M
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 271 LKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRAS 330
G PN V+YNTL+ GLC ++KA+ L N M PN VT +VH ++G
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 331 DGASVLISLEERGHRGNE----YIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVY 386
+ L+ + N I + L+ FK G A+++WKEM +K ++VVY
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 387 SALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKN 446
+ +I GLC G A ++ +M +G P+ FTY++L+ + G +A + M+N
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363
Query: 447 NSCNHNEVCYSILINGLCKNGKLMEA---------------MMVWKQ------------- 478
+++ Y ++I GLC +G + A +++W
Sbjct: 364 GGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSS 423
Query: 479 -------MLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNIL 531
MLS G+K +V +++IHG+ + + N+M + ++ PD TYN+L
Sbjct: 424 ALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEM--RSTKIHPDTTTYNLL 481
Query: 532 LNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
L A ++ A + + ML +GC PD IT
Sbjct: 482 LGAACTLGHLRLAFQLYDEMLRRGCQPDIIT 512
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 206/433 (47%), Gaps = 9/433 (2%)
Query: 141 NSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIH 200
+S++ + +G AL + S + P +T N ++ LCK G +++A + R +
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYS-GVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 201 LRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDL- 259
+P+ +Y+TL+ GLC +D+A+ L + M G PN N+++ ALC+KG +
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 260 IRAAKLVDNM--SLKGCVPNEVTYNT-LVDGLCRKGKLNKAVSLLNQMVANKCVPND-VT 315
KL++ + S + P ++ T L+D + G + +A+ + +M + K VP D V
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEM-SQKNVPADSVV 302
Query: 316 FGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM 375
+ ++ G G + + +RG + + Y++LIS L KEGKF+ A L M
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQ 362
Query: 376 EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCH 435
G P+ + Y +I GLC G + A E+L+ M LP ++ ++ G+ GD
Sbjct: 363 NGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTS 422
Query: 436 KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
A+ V M + N + LI+G K G+L++A V +M S I D Y+ ++
Sbjct: 423 SALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLL 482
Query: 496 HGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQG 555
C + +L+++ML QPD+ TY L+ + + +A +L+ + G
Sbjct: 483 GAACTLGHLRLAFQLYDEML--RRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATG 540
Query: 556 CDPDFITCDIFLK 568
D + I K
Sbjct: 541 ITIDHVPFLILAK 553
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 185/414 (44%), Gaps = 44/414 (10%)
Query: 113 KAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPN 172
KA + EKA L M E S+N+++ + + +AL ++ + K I+PN
Sbjct: 168 KAGYIEKADGLVREMR-EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNK-YGIRPN 225
Query: 173 GLTFNLVIKALCKVGLVD---------------------------------------QAV 193
+T N+++ ALC+ G++ QA+
Sbjct: 226 RVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQAL 285
Query: 194 EVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISAL 253
EV++ + +N DS Y+ ++ GLC G + A + +M G P+ F +N LISAL
Sbjct: 286 EVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISAL 345
Query: 254 CKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPND 313
CK+G A L M G P++++Y ++ GLC G +N+A L M+ + +P
Sbjct: 346 CKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEV 405
Query: 314 VTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKE 373
+ + ++ G+ + G S SVL + G + N Y ++LI G K G+ A + E
Sbjct: 406 LLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNE 465
Query: 374 MMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGD 433
M P+T Y+ L+ C G A + EM +G P+ TY+ L+RG G
Sbjct: 466 MRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGR 525
Query: 434 CHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLS---RGI 484
KA + ++ + V + IL + + EA +V+K+ L+ RG+
Sbjct: 526 LKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATRNRGV 579
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 121/260 (46%), Gaps = 41/260 (15%)
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
I+SS++ L +GK + A+ L K+M+ G P + ++ L++GLC+ G ++A + EM
Sbjct: 123 IHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREM 182
Query: 410 KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLC----- 464
+ G PN +Y++L++G + KA+ ++ M N V +I+++ LC
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI 242
Query: 465 ----------------------------------KNGKLMEAMMVWKQMLSRGIKLDVVA 490
KNG +++A+ VWK+M + + D V
Sbjct: 243 GNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV 302
Query: 491 YSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNI 550
Y+ +I G C++ + M+ + + PDV TYN L++A ++ A D+
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMV--KRGVNPDVFTYNTLISALCKEGKFDEACDLHGT 360
Query: 551 MLDQGCDPDFITCDIFLKTL 570
M + G PD I+ + ++ L
Sbjct: 361 MQNGGVAPDQISYKVIIQGL 380
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 456 YSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
+S ++ LC GKL A+ + K+M+ G+ ++ ++ +++G C A +++ L +M
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREM- 182
Query: 516 CQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMN 575
+E P+ +YN L+ NN+ +A+ + N M G P+ +TC+I + L
Sbjct: 183 -REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 576 PPQDGREFLDELV 588
+ ++ L+E++
Sbjct: 242 IGNNNKKLLEEIL 254
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 192/387 (49%), Gaps = 7/387 (1%)
Query: 68 SFYSLIEKLAASSDFASLEELLQQMKRERRVF--IEKNFIVIFKAYGKAHFPEKAVNLFH 125
S++ L+E L +S FA L + L + RE F K F ++F+AY +A+ P +A F+
Sbjct: 104 SYHILVEILGSSKQFALLWDFLIE-AREYNYFEISSKVFWIVFRAYSRANLPSEACRAFN 162
Query: 126 RMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCK 185
RM EF K V + +L+ + + H + A EF+ K I P+ T++++++ +
Sbjct: 163 RM-VEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGK-AKGFGIVPSAKTYSILVRGWAR 220
Query: 186 VGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFV 245
+ A +VF + RNC D Y+ L+D LCK G +D + EM G P+ +
Sbjct: 221 IRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYS 280
Query: 246 FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
F + I A C GD+ A K++D M VPN T+N ++ LC+ K++ A LL++M+
Sbjct: 281 FAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMI 340
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE 365
P+ T+ +++ + +L ++ + + Y+ ++ L + G+F+
Sbjct: 341 QKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFD 400
Query: 366 HAMQLWKEMMEKGCEPNTVVYSALIDGLCR-EGKADEAREYLIEMKNKGHLPNSFTYSSL 424
A ++W+ M E+ P Y+ +I GL R +GK +EA Y M ++G P S T L
Sbjct: 401 RATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEML 460
Query: 425 MRGFFEAGDCHKA-ILVWKEMKNNSCN 450
G +L K +++SC+
Sbjct: 461 RNRLVGWGQMDVVDVLAGKMERSSSCS 487
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 169/393 (43%), Gaps = 8/393 (2%)
Query: 116 FPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLT 175
FP L+ R +F +++S++ ++ ++ F +F + + +
Sbjct: 83 FPAHRFFLWARRIPDF--AHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKV 140
Query: 176 FNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQ 235
F +V +A + L +A F + P L+ LC + ++ A + +
Sbjct: 141 FWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAK 200
Query: 236 IEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLN 295
G P+ +++L+ + D A K+ D M + CV + + YN L+D LC+ G ++
Sbjct: 201 GFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVD 260
Query: 296 KAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLI 355
+ +M P+ +F +H + G VL ++ N Y ++ +I
Sbjct: 261 GGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHII 320
Query: 356 SGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL 415
L K K + A L EM++KG P+T Y++++ C + + A + L M L
Sbjct: 321 KTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCL 380
Query: 416 PNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLC-KNGKLMEAMM 474
P+ TY+ +++ G +A +W+ M Y+++I+GL K GKL EA
Sbjct: 381 PDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACR 440
Query: 475 VWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQG 507
++ M+ GI YS+ + N +LV G
Sbjct: 441 YFEMMIDEGIP----PYSTTVEMLRN-RLVGWG 468
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 139/281 (49%), Gaps = 22/281 (7%)
Query: 367 AMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMR 426
A + + M+E G +P L+ LC + + A+E+ + K G +P++ TYS L+R
Sbjct: 157 ACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVR 216
Query: 427 GFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKL 486
G+ D A V+ EM +C + + Y+ L++ LCK+G + ++++M + G+K
Sbjct: 217 GWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKP 276
Query: 487 DVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMD 546
D +++ IH +C+A V K+ ++M + +L P+V T+N ++ + + A
Sbjct: 277 DAYSFAIFIHAYCDAGDVHSAYKVLDRM--KRYDLVPNVYTFNHIIKTLCKNEKVDDAYL 334
Query: 547 VLNIMLDQGCDPDFIT--------CD---------IFLKTLRDNMNPPQDGREFLDELVV 589
+L+ M+ +G +PD T CD + + R P + + +L++
Sbjct: 335 LLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLI 394
Query: 590 RLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPR 630
R+ + R A++I E M +R P +T+ +++ L + +
Sbjct: 395 RIGRFDR---ATEIWEGMSERKFYPTVATYTVMIHGLVRKK 432
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 3/239 (1%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
L++ +L++ L S D ++ Q+M +F + AY A A + R
Sbjct: 244 LAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDR 303
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
M+ + V +FN ++ + + A + + P+ T+N ++ C
Sbjct: 304 MK-RYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQK-GANPDTWTYNSIMAYHCDH 361
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
V++A ++ + C PD +TY+ ++ L + GR D A + + M +P +
Sbjct: 362 CEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATY 421
Query: 247 NVLISALC-KKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM 304
V+I L KKG L A + + M +G P T L + L G+++ L +M
Sbjct: 422 TVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKM 480
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 136/509 (26%), Positives = 241/509 (47%), Gaps = 39/509 (7%)
Query: 136 TVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEV 195
T+ S + L + + F+ L+FYS + S I N +++V A + + A E
Sbjct: 25 TLNSIDRFLRYLYRLQKFNCILQFYSQL-DSKQININHRIYSIVSWAFLNLNRYEDA-EK 82
Query: 196 FRGIHLRNCA--PDSYTYSTLMDGLCKEGRIDEAVSLL---DEMQIEGTFPNPFVFNVLI 250
F IH+ + P ++ +L+ G R D + LL D ++ G FP+ F LI
Sbjct: 83 FINIHISKASIFPRTHMLDSLIHGFSIT-RDDPSKGLLILRDCLRNHGAFPSSLTFCSLI 141
Query: 251 SALCKKGDLIRAAKLVDNMSLKGC-VP-NEVTYNTLVDGLCRKGKLNKAVSLLNQMV-AN 307
+KG++ A ++++ M+ K P + + ++ G C+ GK A+ V +
Sbjct: 142 YRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSG 201
Query: 308 KCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHA 367
VPN VT+ TLV + G+ + ++ LE+ G + YS+ I G FK G A
Sbjct: 202 VLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDA 261
Query: 368 MQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRG 427
+ +EM+EKG + V YS LIDGL +EG +EA L +M +G PN TY++++RG
Sbjct: 262 LMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRG 321
Query: 428 FFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLD 487
+ G +A +++ + + +E Y LI+G+C+ G L A + M RGI+
Sbjct: 322 LCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPS 381
Query: 488 VVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDV 547
++ Y+++I+G C A V + ++ ++ DV TY+ LL+++ + NI +++
Sbjct: 382 ILTYNTVINGLCMAGRVSEADEVSKGVV-------GDVITYSTLLDSYIKVQNIDAVLEI 434
Query: 548 LNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVM 607
L+ D + C+I LK L++ A + M
Sbjct: 435 RRRFLEAKIPMDLVMCNILLKAF----------------LLMGAYGE-----ADALYRAM 473
Query: 608 LDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
+ L P+ +T+A +++ CK I +A+
Sbjct: 474 PEMDLTPDTATYATMIKGYCKTGQIEEAL 502
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 216/437 (49%), Gaps = 10/437 (2%)
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVC-KSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFR 197
+F S++ +++G A+E + K++N + + VI CK+G + A+ F
Sbjct: 136 TFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFE 195
Query: 198 -GIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
+ P+ TY+TL+ LC+ G++DE L+ ++ EG + ++ I K
Sbjct: 196 SAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKG 255
Query: 257 GDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTF 316
G L+ A M KG + V+Y+ L+DGL ++G + +A+ LL +M+ PN +T+
Sbjct: 256 GALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITY 315
Query: 317 GTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMME 376
++ G K G+ + + + G +E++Y +LI G+ ++G A + +M +
Sbjct: 316 TAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQ 375
Query: 377 KGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHK 436
+G +P+ + Y+ +I+GLC G+ EA E +KG + + TYS+L+ + + +
Sbjct: 376 RGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDA 430
Query: 437 AILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIH 496
+ + + + V +IL+ G EA +++ M + D Y++MI
Sbjct: 431 VLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIK 490
Query: 497 GFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGC 556
G+C +++ +++FN++ +++ + V YN +++A ++ + A +VL + ++G
Sbjct: 491 GYCKTGQIEEALEMFNEL--RKSSVSAAVC-YNRIIDALCKKGMLDTATEVLIELWEKGL 547
Query: 557 DPDFITCDIFLKTLRDN 573
D T L ++ N
Sbjct: 548 YLDIHTSRTLLHSIHAN 564
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 142/569 (24%), Positives = 249/569 (43%), Gaps = 91/569 (15%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIV---IFKAYGKAHFPEKAVNL 123
+S+ LI+ L+ + LL +M +E +E N I I + K E+A L
Sbjct: 278 VSYSILIDGLSKEGNVEEALGLLGKMIKEG---VEPNLITYTAIIRGLCKMGKLEEAFVL 334
Query: 124 FHRMEAEFHCKQTVKSF--NSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIK 181
F+R+ V F ++++ I ++G+ +RA + + IQP+ LT+N VI
Sbjct: 335 FNRI---LSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDM-EQRGIQPSILTYNTVIN 390
Query: 182 ALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFP 241
LC G V +A EV +G+ D TYSTL+D K ID AV + +E P
Sbjct: 391 GLCMAGRVSEADEVSKGV-----VGDVITYSTLLDSYIKVQNID-AVLEIRRRFLEAKIP 444
Query: 242 NPFVF-NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSL 300
V N+L+ A G A L M P+ TY T++ G C+ G++ +A+ +
Sbjct: 445 MDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEM 504
Query: 301 LNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERG-----HRGNEYIYS--- 352
N++ V V + ++ K+G VLI L E+G H ++S
Sbjct: 505 FNEL-RKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHA 563
Query: 353 --------SLISGL-------------------FKEGKFEHAMQLWKEMMEKGCE---PN 382
L+ GL K G FE A++++ M KG P+
Sbjct: 564 NGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPS 623
Query: 383 TVV-------------------------------YSALIDGLCREGKADEAREYLIEMKN 411
T++ Y+ +I+GLC+EG +A K+
Sbjct: 624 TILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKS 683
Query: 412 KGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLME 471
+G N+ TY+SL+ G + G +A+ ++ ++N +EV Y ILI+ LCK G ++
Sbjct: 684 RGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLD 743
Query: 472 AMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNIL 531
A + M+S+G+ +++ Y+S++ G+C + M++ ++ + + PD T + +
Sbjct: 744 AEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMM--GRVTPDAFTVSSM 801
Query: 532 LNAFYQQNNISRAMDVLNIMLDQGCDPDF 560
+ + ++ ++ A+ V D+ DF
Sbjct: 802 IKGYCKKGDMEEALSVFTEFKDKNISADF 830
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 129/533 (24%), Positives = 243/533 (45%), Gaps = 74/533 (13%)
Query: 135 QTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVE 194
+ V S++ +++ + +EG+ AL + K ++PN +T+ +I+ LCK+G +++A
Sbjct: 275 RDVVSYSILIDGLSKEGNVEEALGLLGKMIKE-GVEPNLITYTAIIRGLCKMGKLEEAFV 333
Query: 195 VFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALC 254
+F I D + Y TL+DG+C++G ++ A S+L +M+ G P+ +N +I+ LC
Sbjct: 334 LFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLC 393
Query: 255 KKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDV 314
G + A D +S KG V + +TY+TL+D + ++ + + + + K +P D+
Sbjct: 394 MAGRVSEA----DEVS-KGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAK-IPMDL 447
Query: 315 TF-GTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKE 373
L+ F+ G + ++ ++ E + Y+++I G K G+ E A++++ E
Sbjct: 448 VMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNE 507
Query: 374 MMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF-EAG 432
+ K V Y+ +ID LC++G D A E LIE+ KG + T +L+ G
Sbjct: 508 L-RKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGG 566
Query: 433 DCHKAILVWKEMKNNSCNHNEVCYSILING---LCKNGKLMEAMMVWKQMLSRGI----- 484
D LV+ + NS +VC +L + LCK G A+ V+ M +G+
Sbjct: 567 DKGILGLVYGLEQLNS----DVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFP 622
Query: 485 -----------------------------KLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
+DV+ Y+ +I+G C + + + L +
Sbjct: 623 STILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCS--F 680
Query: 516 CQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMN 575
+ + + TYN L+N QQ + A+ + + + + G P +T I + DN
Sbjct: 681 AKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILI----DN-- 734
Query: 576 PPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCK 628
L K + A K+++ M+ + L+P + +V CK
Sbjct: 735 ---------------LCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCK 772
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 213/460 (46%), Gaps = 66/460 (14%)
Query: 106 VIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCK 165
++ AYG+A + +R E ++ +++ + G ALE ++ + K
Sbjct: 458 LLMGAYGEA-------DALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRK 510
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDG-------- 217
S + +N +I ALCK G++D A EV + + D +T TL+
Sbjct: 511 S--SVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDK 568
Query: 218 ---------------------------LCKEGRIDEAVSLLDEMQIEG---TFPNPFVFN 247
LCK G + A+ + M+ +G TFP+
Sbjct: 569 GILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPS----- 623
Query: 248 VLISALCKKGDLIRAAKLVDNMSLKGCVPNEVT-YNTLVDGLCRKGKLNKAVSLLNQMVA 306
++ L + A LV N +V Y +++GLC++G L KA++L + +
Sbjct: 624 TILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKS 683
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEH 366
N +T+ +L++G +QG + + SLE G +E Y LI L KEG F
Sbjct: 684 RGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLD 743
Query: 367 AMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL-PNSFTYSSLM 425
A +L M+ KG PN ++Y++++DG C+ G+ ++A ++ K G + P++FT SS++
Sbjct: 744 AEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMR-VVSRKMMGRVTPDAFTVSSMI 802
Query: 426 RGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQML-SRGI 484
+G+ + GD +A+ V+ E K+ + + + + LI G C G++ EA + ++ML S +
Sbjct: 803 KGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESV 862
Query: 485 -----KLDV-VAYSSMIHGF----CNAQLVDQGMKLFNQM 514
++D +A S I GF C V Q +K+ +++
Sbjct: 863 VKLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDEI 902
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 184/417 (44%), Gaps = 44/417 (10%)
Query: 141 NSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIH 200
N +L + G + A Y +++ P+ T+ +IK CK G +++A+E+F +
Sbjct: 451 NILLKAFLLMGAYGEADALY-RAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELR 509
Query: 201 LRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISA-------- 252
++ + Y+ ++D LCK+G +D A +L E+ +G + + L+ +
Sbjct: 510 -KSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDK 568
Query: 253 ---------------------------LCKKGDLIRAAKLVDNMSLKGCV---PNEVTYN 282
LCK+G A ++ M KG P+ +
Sbjct: 569 GILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTI-LK 627
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER 342
TLVD L L+ + ++N + + + +++G K+G ++ + R
Sbjct: 628 TLVDNL---RSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSR 684
Query: 343 GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
G N Y+SLI+GL ++G A++L+ + G P+ V Y LID LC+EG +A
Sbjct: 685 GVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDA 744
Query: 403 REYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILING 462
+ L M +KG +PN Y+S++ G+ + G A+ V + S +I G
Sbjct: 745 EKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKG 804
Query: 463 LCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEA 519
CK G + EA+ V+ + + I D + +I GFC +++ L +ML E+
Sbjct: 805 YCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSES 861
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 149/316 (47%), Gaps = 16/316 (5%)
Query: 103 NFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSH 162
++ +I K F KA+NL ++ T+ ++NS++N + Q+G AL +
Sbjct: 657 DYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTI-TYNSLINGLCQQGCLVEALRLFDS 715
Query: 163 VCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEG 222
+ +++ + P+ +T+ ++I LCK GL A ++ + + P+ Y++++DG CK G
Sbjct: 716 L-ENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLG 774
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
+ ++A+ ++ + P+ F + +I CKKGD+ A + K + +
Sbjct: 775 QTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFL 834
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER 342
L+ G C KG++ +A LL +M+ ++ V V V + + + G L+ L E+
Sbjct: 835 FLIKGFCTKGRMEEARGLLREMLVSESV---VKLINRVDAELAESESIRG--FLVELCEQ 889
Query: 343 GHRGNEY-IYSSLISGLFKEGK---FEHAMQLWKEMMEKGCEPNTVVYS-----ALIDGL 393
G I + S ++ GK +Q ++ E+ + V+ + + L
Sbjct: 890 GRVPQAIKILDEISSTIYPSGKNLGSYQRLQFLNDVNEEEIKKKDYVHDFHSLHSTVSSL 949
Query: 394 CREGKADEAREYLIEM 409
C GK ++A E+++ +
Sbjct: 950 CTSGKLEQANEFVMSV 965
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 127/321 (39%), Gaps = 82/321 (25%)
Query: 328 RASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYS 387
R S G L SL + G + L++ KF +Q + ++ K N +YS
Sbjct: 6 RTSSGLFSLQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYS 65
Query: 388 ------------------------------------ALIDGLCREGKADEAREYLIE--- 408
+LI G + D ++ LI
Sbjct: 66 IVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSIT-RDDPSKGLLILRDC 124
Query: 409 MKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNH----------------- 451
++N G P+S T+ SL+ F E G+ AI V + M N + N+
Sbjct: 125 LRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKI 184
Query: 452 ---------------------NEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVA 490
N V Y+ L++ LC+ GK+ E + +++ G + D V
Sbjct: 185 GKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVF 244
Query: 491 YSSMIHG-FCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLN 549
YS+ IHG F LVD M+ +M+ E + DV +Y+IL++ ++ N+ A+ +L
Sbjct: 245 YSNWIHGYFKGGALVDALMQ-DREMV--EKGMNRDVVSYSILIDGLSKEGNVEEALGLLG 301
Query: 550 IMLDQGCDPDFITCDIFLKTL 570
M+ +G +P+ IT ++ L
Sbjct: 302 KMIKEGVEPNLITYTAIIRGL 322
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 130/550 (23%), Positives = 248/550 (45%), Gaps = 42/550 (7%)
Query: 56 SHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAH 115
S G+ KL + L S ++ +LL ++ + + + + I AY +
Sbjct: 165 SSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTG 224
Query: 116 FPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLT 175
EKA++LF RM+ E T+ ++N +L+V + G R + +S ++ + T
Sbjct: 225 KYEKAIDLFERMK-EMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFT 283
Query: 176 FNLVIKALCKVGLVDQAVEVFRGIHLRNCA--PDSYTYSTLMDGLCKEGRIDEAVSLLDE 233
+ V+ A + GL+ +A E F L++C P + TY+ L+ K G EA+S+L E
Sbjct: 284 CSTVLSACAREGLLREAKEFF--AELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE 341
Query: 234 MQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGK 293
M+ + +N L++A + G AA +++ M+ KG +PN +TY T++D + GK
Sbjct: 342 MEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGK 401
Query: 294 LNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSS 353
++A+ L M CVPN T+ ++ K+ R+++ +L ++ G N +++
Sbjct: 402 EDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNT 461
Query: 354 LISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKG 413
+++ +G + ++++EM G EP+ ++ LI R G +A + EM G
Sbjct: 462 MLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAG 521
Query: 414 HLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSIL-------------- 459
TY++L+ GD V +MK+ E YS++
Sbjct: 522 FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIE 581
Query: 460 -INGLCKNGKLMEAMMVWKQML--------------------SRGIKLDVVAYSSMIHGF 498
I K G++ + M+ + +L G K D+V ++SM+ F
Sbjct: 582 RIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIF 641
Query: 499 CNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDP 558
+ DQ + + +E L PD+ TYN L++ + ++ +A ++L + P
Sbjct: 642 TRNNMYDQAEGILESI--REDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKP 699
Query: 559 DFITCDIFLK 568
D ++ + +K
Sbjct: 700 DLVSYNTVIK 709
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 192/411 (46%), Gaps = 47/411 (11%)
Query: 103 NFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSH 162
+ + AYGKA ++A+ LF+ M+ E C ++N+VL+++ G R+ E
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMK-EAGCVPNTCTYNAVLSLL---GKKSRSNEMIKM 443
Query: 163 VC--KSLNIQPNGLTFNLVIKALCKVGLVDQAV-EVFRGIHLRNCA--PDSYTYSTLMDG 217
+C KS PN T+N ++ ALC +D+ V VFR +++C PD T++TL+
Sbjct: 444 LCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFR--EMKSCGFEPDRDTFNTLISA 500
Query: 218 LCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPN 277
+ G +A + EM G +N L++AL +KGD ++ +M KG P
Sbjct: 501 YGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPT 560
Query: 278 EVTYNTL---------------VDGLCRKGKLNKAVSLLNQ-MVAN-KC----------- 309
E +Y+ + ++ ++G++ + LL ++AN KC
Sbjct: 561 ETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFT 620
Query: 310 -------VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEG 362
P+ V F +++ F + +L S+ E G + Y+SL+ + G
Sbjct: 621 LFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRG 680
Query: 363 KFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYS 422
+ A ++ K + + +P+ V Y+ +I G CR G EA L EM +G P FTY+
Sbjct: 681 ECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYN 740
Query: 423 SLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAM 473
+ + G+ G + V + M N C NE+ + ++++G C+ GK EAM
Sbjct: 741 TFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAM 791
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 145/310 (46%), Gaps = 4/310 (1%)
Query: 103 NFIVIFKAYGKAHFPEKAVNLFHRM-EAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYS 161
F + AYG+ A ++ M A F+ V ++N++LN + ++G + S
Sbjct: 493 TFNTLISAYGRCGSEVDASKMYGEMTRAGFNA--CVTTYNALLNALARKGDWRSGENVIS 550
Query: 162 HVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKE 221
+ KS +P +++L+++ K G + I P TL+ K
Sbjct: 551 DM-KSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKC 609
Query: 222 GRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTY 281
+ + + G P+ +FN ++S + +A +++++ G P+ VTY
Sbjct: 610 RALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTY 669
Query: 282 NTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEE 341
N+L+D R+G+ KA +L + ++ P+ V++ T++ GF ++G + +L + E
Sbjct: 670 NSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTE 729
Query: 342 RGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADE 401
RG R + Y++ +SG G F + + M + C PN + + ++DG CR GK E
Sbjct: 730 RGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSE 789
Query: 402 AREYLIEMKN 411
A +++ ++K
Sbjct: 790 AMDFVSKIKT 799
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 124/284 (43%), Gaps = 38/284 (13%)
Query: 288 LCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGN 347
L R+ + + A LL+++ + + + + T++H + + G+ + ++E G
Sbjct: 185 LGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPT 244
Query: 348 EYIYSSLISGLFKEGK-FEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYL 406
Y+ ++ K G+ + + + EM KG + + S ++ REG EA+E+
Sbjct: 245 LVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFF 304
Query: 407 IEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKN 466
E+K+ G+ P + TY++L++ F +AG +A+ V KEM+ NSC + V Y+ L+ +
Sbjct: 305 AELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRA 364
Query: 467 GKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVA 526
G EA V + M +G+ P+
Sbjct: 365 GFSKEAAGVIEMMTKKGV-------------------------------------MPNAI 387
Query: 527 TYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
TY +++A+ + A+ + M + GC P+ T + L L
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLL 431
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 125/281 (44%), Gaps = 28/281 (9%)
Query: 353 SLISGLFKEGKFEHAMQLWKEMM----EKGCEPNTVVYSALIDGLCREGKADEAREYLIE 408
SL+ GL G +E A+ L++ ++ + + V + L RE + A + L +
Sbjct: 141 SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDK 200
Query: 409 MKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGK 468
+ + +L + Y++++ + G KAI +++ MK + V Y+++++ K G+
Sbjct: 201 IPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR 260
Query: 469 LMEAMM-VWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVAT 527
++ V +M S+G+K D S+++ L+ + + F ++ + +P T
Sbjct: 261 SWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL--KSCGYEPGTVT 318
Query: 528 YNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDEL 587
YN LL F + + A+ VL M + C D +T +EL
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVT---------------------YNEL 357
Query: 588 VVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCK 628
V V+ + A+ +IE+M + ++P A T+ V+ K
Sbjct: 358 VAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGK 398
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 211/421 (50%), Gaps = 21/421 (4%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVF-IEKNFIVIFKAYGKAHFPEKAVNLFH 125
L + +I KL S F L+++L +K + R+ E F + +G+ P +A+++F
Sbjct: 48 LCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFD 107
Query: 126 RMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCK 185
M ++ C++TVKS NS+L+ +++ G + E S + + +P+ T+N++I +
Sbjct: 108 EM-PQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG--KPDACTYNILIHGCSQ 164
Query: 186 VGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLL-DEMQIEGTFPNPF 244
G D A+++F + + P T+ TL+ GLCK+ R+ EA+ + D +++ G P
Sbjct: 165 SGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVH 224
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM 304
++ LI ALC+ G+L A KL D + Y+TL+ L + G+ N+ +L +M
Sbjct: 225 IYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEM 284
Query: 305 VANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKF 364
C P+ VT+ L++GF + + VL + E+G + + Y+ ++ F+ K+
Sbjct: 285 SEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKW 344
Query: 365 EHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSL 424
E A L+++M +GC P+T+ Y + DGLC + +EA L EM KG+ P
Sbjct: 345 EEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGF 404
Query: 425 MRGFFEAG----------DCHKAIL----VWKEMKNNSCNHNEVCYSI--LINGLCKNGK 468
++ E+G H+ I VW M C + SI L+N + ++G
Sbjct: 405 LQKLCESGKLEILSKVISSLHRGIAGDADVWSVMIPTMCKEPVISDSIDLLLNTVKEDGP 464
Query: 469 L 469
L
Sbjct: 465 L 465
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 183/388 (47%), Gaps = 5/388 (1%)
Query: 162 HVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKE 221
H+ I P + F VI + L +A+ +F + C + ++L+ L K
Sbjct: 72 HLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKC 131
Query: 222 GRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTY 281
G +++ L + G P+ +N+LI + G A KL D M K P VT+
Sbjct: 132 GELEKMKERLSSIDEFGK-PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTF 190
Query: 282 NTLVDGLCRKGKLNKAVSLLNQMVANKCV-PNDVTFGTLVHGFVKQGRASDGASVLISLE 340
TL+ GLC+ ++ +A+ + + M+ V P + +L+ + G S +
Sbjct: 191 GTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAY 250
Query: 341 ERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
E + + IYS+LIS L K G+ + +EM EKGC+P+TV Y+ LI+G C E ++
Sbjct: 251 EGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSE 310
Query: 401 EAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILI 460
A L EM KG P+ +Y+ ++ FF +A ++++M C+ + + Y I+
Sbjct: 311 SANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVF 370
Query: 461 NGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAE 520
+GLC+ + EA ++ +ML +G K + C + ++ K+ + +
Sbjct: 371 DGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL---HRG 427
Query: 521 LQPDVATYNILLNAFYQQNNISRAMDVL 548
+ D +++++ ++ IS ++D+L
Sbjct: 428 IAGDADVWSVMIPTMCKEPVISDSIDLL 455
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 183/377 (48%), Gaps = 19/377 (5%)
Query: 275 VPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGAS 334
VP E+ + +++ R ++A+ + ++M +C + +L+ +K G
Sbjct: 80 VPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKE 139
Query: 335 VLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLC 394
L S++E G + + Y+ LI G + G F+ A++L+ EM++K +P V + LI GLC
Sbjct: 140 RLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLC 198
Query: 395 REGKADEAREYLIEM-KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNE 453
++ + EA + +M K G P Y+SL++ + G+ A + E +
Sbjct: 199 KDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDA 258
Query: 454 VCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQ 513
YS LI+ L K G+ E M+ ++M +G K D V Y+ +I+GFC + ++ ++
Sbjct: 259 AIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDE 318
Query: 514 MLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDN 573
M+ E L+PDV +YN++L F++ A + M +GC PD ++ I L +
Sbjct: 319 MV--EKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEG 376
Query: 574 MNPPQDGREFLDELVVRLVKRQR--------TIGASKIIEVM------LDRCLLPEASTW 619
+ ++ LDE++ + K +R + S +E++ L R + +A W
Sbjct: 377 LQ-FEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAGDADVW 435
Query: 620 AIVVQQLCKPRNIRKAI 636
++++ +CK I +I
Sbjct: 436 SVMIPTMCKEPVISDSI 452
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 189/358 (52%), Gaps = 4/358 (1%)
Query: 50 EIFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFK 109
EIF S + +++ S LI KL F ++++L + + + F + K
Sbjct: 69 EIFDYASQQ-PNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIK 127
Query: 110 AYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVII-QEGHFHRALEFYSHVCKSLN 168
Y +A PEK ++ F++M EF+ K N +L+V++ G+ +A E + +
Sbjct: 128 VYAEAKLPEKVLSTFYKM-LEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKS-SRLHG 185
Query: 169 IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAV 228
+ PN ++NL+++A C + A ++F + R+ PD +Y L+ G C++G+++ A+
Sbjct: 186 VMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAM 245
Query: 229 SLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGL 288
LLD+M +G P+ + L+++LC+K L A KL+ M LKGC P+ V YNT++ G
Sbjct: 246 ELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGF 305
Query: 289 CRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNE 348
CR+ + A +L+ M++N C PN V++ TL+ G QG +G L + +G +
Sbjct: 306 CREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHF 365
Query: 349 YIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYL 406
+ + L+ G GK E A + + +M+ G ++ + +I +C E ++++ + +L
Sbjct: 366 SVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFL 423
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 151/295 (51%), Gaps = 3/295 (1%)
Query: 172 NGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCK-EGRIDEAVSL 230
G F +IK + L ++ + F + N P + ++D L G + +A L
Sbjct: 118 TGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFEL 177
Query: 231 LDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCR 290
++ G PN +N+L+ A C DL A +L M + VP+ +Y L+ G CR
Sbjct: 178 FKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCR 237
Query: 291 KGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYI 350
KG++N A+ LL+ M+ VP+ +++ TL++ ++ + + +L ++ +G +
Sbjct: 238 KGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVH 297
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
Y+++I G +E + A ++ +M+ GC PN+V Y LI GLC +G DE ++YL EM
Sbjct: 298 YNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMI 357
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAI-LVWKEMKNNSCNHNEVCYSILINGLC 464
+KG P+ + L++GF G +A +V MKN H++ + ++I +C
Sbjct: 358 SKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDT-WEMVIPLIC 411
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 144/293 (49%), Gaps = 3/293 (1%)
Query: 221 EGRIDEAVSLLDEMQIEGTF-PNPFVFNVLISALCK-KGDLIRAAKLVDNMSLKGCVPNE 278
E ++ E V +E F P P N ++ L +G L +A +L + L G +PN
Sbjct: 131 EAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNT 190
Query: 279 VTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLIS 338
+YN L+ C L+ A L +M+ VP+ ++ L+ GF ++G+ + +L
Sbjct: 191 RSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDD 250
Query: 339 LEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGK 398
+ +G + Y++L++ L ++ + A +L M KGC P+ V Y+ +I G CRE +
Sbjct: 251 MLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDR 310
Query: 399 ADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSI 458
A +AR+ L +M + G PNS +Y +L+ G + G + +EM + + + +
Sbjct: 311 AMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNC 370
Query: 459 LINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLF 511
L+ G C GK+ EA V + ++ G L + +I CN ++ +KLF
Sbjct: 371 LVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK-IKLF 422
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 2/189 (1%)
Query: 367 AMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMR 426
A QL+ +M+E+ P+ Y LI G CR+G+ + A E L +M NKG +P+ +Y++L+
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLN 268
Query: 427 GFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKL 486
+A + MK CN + V Y+ +I G C+ + M+A V MLS G
Sbjct: 269 SLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSP 328
Query: 487 DVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMD 546
+ V+Y ++I G C+ + D+G K +M+ + P + N L+ F + A D
Sbjct: 329 NSVSYRTLIGGLCDQGMFDEGKKYLEEMISK--GFSPHFSVSNCLVKGFCSFGKVEEACD 386
Query: 547 VLNIMLDQG 555
V+ +++ G
Sbjct: 387 VVEVVMKNG 395
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 142/306 (46%), Gaps = 26/306 (8%)
Query: 344 HRGNEY-----IYSSLISGLFKEGKF-EHAMQLWKEMMEKGCEPNTVVYSALIDGLC-RE 396
HR + Y I++ LI ++ E K E + + +M+E P + ++D L
Sbjct: 110 HRSSGYPLTGEIFTYLIK-VYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHR 168
Query: 397 GKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCY 456
G +A E + G +PN+ +Y+ LM+ F D A ++ +M + Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 457 SILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLC 516
ILI G C+ G++ AM + ML++G D ++Y+++++ C + + KL +M
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 517 QEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNP 576
+ PD+ YN ++ F +++ A VL+ ML GC P+ ++ + L D
Sbjct: 289 KGC--NPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQ-GM 345
Query: 577 PQDGREFLDELVVR-----------LVKRQRTIG----ASKIIEVMLDRCLLPEASTWAI 621
+G+++L+E++ + LVK + G A ++EV++ + TW +
Sbjct: 346 FDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEM 405
Query: 622 VVQQLC 627
V+ +C
Sbjct: 406 VIPLIC 411
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 5/169 (2%)
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVC--KSLNIQPNGLTFNLVIKALCKVGLVDQAVEVF 196
S+ ++LN + ++ A Y +C K P+ + +N +I C+ A +V
Sbjct: 262 SYTTLLNSLCRKTQLREA---YKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVL 318
Query: 197 RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
+ C+P+S +Y TL+ GLC +G DE L+EM +G P+ V N L+ C
Sbjct: 319 DDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSF 378
Query: 257 GDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
G + A +V+ + G + T+ ++ +C + + K L V
Sbjct: 379 GKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAV 427
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 189/383 (49%), Gaps = 2/383 (0%)
Query: 117 PEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTF 176
PE+A++LFH+ + E + S++S++ + + +F A++ + + N++ F
Sbjct: 62 PEEALSLFHQYQ-EMGFRHDYPSYSSLIYKLAKSRNFD-AVDQILRLVRYRNVRCRESLF 119
Query: 177 NLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQI 236
+I+ K G VD+A++VF I +C + +TL++ L G +++A S D +
Sbjct: 120 MGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKD 179
Query: 237 EGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNK 296
PN FN+LI K D A K+ D M P+ VTYN+L+ LCR + K
Sbjct: 180 MRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGK 239
Query: 297 AVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLIS 356
A SLL M+ + PN VTFG L+ G +G ++ ++ +E RG + Y L+S
Sbjct: 240 AKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMS 299
Query: 357 GLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLP 416
L K G+ + A L EM ++ +P+ V+Y+ L++ LC E + EA L EM+ KG P
Sbjct: 300 DLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKP 359
Query: 417 NSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVW 476
N+ TY ++ GF D + V M + + ++ GL K G L A V
Sbjct: 360 NAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVL 419
Query: 477 KQMLSRGIKLDVVAYSSMIHGFC 499
+ M + + A+ +++ C
Sbjct: 420 EVMGKKNLSFGSGAWQNLLSDLC 442
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 186/348 (53%), Gaps = 3/348 (0%)
Query: 68 SFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRM 127
S+ SLI KLA S +F +++++L+ ++ E F+ + + YGKA +KA+++FH++
Sbjct: 83 SYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKI 142
Query: 128 EAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVG 187
+ F C +T++S N+++NV++ G +A F+ K + ++PN ++FN++IK
Sbjct: 143 TS-FDCVRTIQSLNTLINVLVDNGELEKAKSFFDGA-KDMRLRPNSVSFNILIKGFLDKC 200
Query: 188 LVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFN 247
+ A +VF + P TY++L+ LC+ + +A SLL++M + PN F
Sbjct: 201 DWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFG 260
Query: 248 VLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVAN 307
+L+ LC KG+ A KL+ +M +GC P V Y L+ L ++G++++A LL +M
Sbjct: 261 LLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKR 320
Query: 308 KCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHA 367
+ P+ V + LV+ + R + VL ++ +G + N Y +I G + F+
Sbjct: 321 RIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSG 380
Query: 368 MQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL 415
+ + M+ P + ++ GL + G D A +++E+ K +L
Sbjct: 381 LNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHAC-FVLEVMGKKNL 427
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 166/362 (45%), Gaps = 2/362 (0%)
Query: 190 DQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVL 249
++A+ +F D +YS+L+ L K D +L ++ +F L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 250 ISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC 309
I K G + +A + ++ CV + NTL++ L G+L KA S + +
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 310 VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
PN V+F L+ GF+ + V + E + + Y+SLI L + A
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF 429
L ++M++K PN V + L+ GLC +G+ +EA++ + +M+ +G P Y LM
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 430 EAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVV 489
+ G +A L+ EMK + V Y+IL+N LC ++ EA V +M +G K +
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Query: 490 AYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLN 549
Y MI GFC + D G+ + N ML + P AT+ ++ + N+ A VL
Sbjct: 363 TYRMMIDGFCRIEDFDSGLNVLNAMLA--SRHCPTPATFVCMVAGLIKGGNLDHACFVLE 420
Query: 550 IM 551
+M
Sbjct: 421 VM 422
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 162/328 (49%), Gaps = 2/328 (0%)
Query: 225 DEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTL 284
+EA+SL + Q G + ++ LI L K + +++ + + E + L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 285 VDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGH 344
+ + G ++KA+ + +++ + CV + TL++ V G S ++
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 345 RGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE 404
R N ++ LI G + +E A +++ EM+E +P+ V Y++LI LCR +A+
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 405 YLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLC 464
L +M K PN+ T+ LM+G G+ ++A + +M+ C V Y IL++ L
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 465 KNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPD 524
K G++ EA ++ +M R IK DVV Y+ +++ C V + ++ +M Q +P+
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEM--QMKGCKPN 360
Query: 525 VATYNILLNAFYQQNNISRAMDVLNIML 552
ATY ++++ F + + ++VLN ML
Sbjct: 361 AATYRMMIDGFCRIEDFDSGLNVLNAML 388
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 16/277 (5%)
Query: 365 EHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSL 424
E A+ L+ + E G + YS+LI L + D + L ++ + + L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 425 MRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGI 484
++ + +AG KAI V+ ++ + C + LIN L NG+L +A + +
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 485 KLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRA 544
+ + V+++ +I GF + + K+F++ML E E+QP V TYN L+ + +++ +A
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEML--EMEVQPSVVTYNSLIGFLCRNDDMGKA 240
Query: 545 MDVLNIMLDQGCDPDFITCDIFLKTL--RDNMNPPQD------------GREFLDELVVR 590
+L M+ + P+ +T + +K L + N + G L+
Sbjct: 241 KSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSD 300
Query: 591 LVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLC 627
L KR R A ++ M R + P+ + I+V LC
Sbjct: 301 LGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLC 337
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 101/225 (44%), Gaps = 2/225 (0%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
+++ SLI L + D + LL+ M ++R F ++ K +A L
Sbjct: 222 VTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFD 281
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
ME CK + ++ +++ + + G A + K I+P+ + +N+++ LC
Sbjct: 282 MEYR-GCKPGLVNYGILMSDLGKRGRIDEAKLLLGEM-KKRRIKPDVVIYNILVNHLCTE 339
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
V +A V + ++ C P++ TY ++DG C+ D +++L+ M P P F
Sbjct: 340 CRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATF 399
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRK 291
+++ L K G+L A +++ M K + L+ LC K
Sbjct: 400 VCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIK 444
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/596 (22%), Positives = 264/596 (44%), Gaps = 44/596 (7%)
Query: 56 SHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFI---EKNFIVIFKAYG 112
S+K S+K + SF+ ++E L + + L ++R + ++ F + ++YG
Sbjct: 92 SNKGFSHK--EQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYG 149
Query: 113 KAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPN 172
A +++V LF M+ + +V +FNS+L+++++ G A + + + ++ + P+
Sbjct: 150 NAGLFQESVKLFQTMK-QMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPD 208
Query: 173 GLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLD 232
TFN +I CK +VD+A +F+ + L +C PD TY+T++DGLC+ G++ A ++L
Sbjct: 209 SYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLS 268
Query: 233 EMQIEGT--FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCR 290
M + T PN + L+ C K ++ A + +M +G PN VTYNTL+ GL
Sbjct: 269 GMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSE 328
Query: 291 KGKLNKAVSLL--NQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNE 348
+ ++ +L P+ TF L+ G V + +
Sbjct: 329 AHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDS 388
Query: 349 YIYSSLISGLFKEGKFEHAMQLWKEMMEK-------GCEPNTVVYSALIDGLCREGKADE 401
YS LI L +F+ A L+ E+ EK C+P Y+ + + LC GK +
Sbjct: 389 ASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQ 448
Query: 402 AREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILIN 461
A + ++ +G + + +Y +L+ G G A + M + Y +LI+
Sbjct: 449 AEKVFRQLMKRG-VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLID 507
Query: 462 GLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAEL 521
GL K G+ + A ++ML + S++ + ++ L ML +
Sbjct: 508 GLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQ 567
Query: 522 QPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGR 581
D++T + L + +A ++ ++ D G +K
Sbjct: 568 NIDLSTQVVRL--LFSSAQKEKAFLIVRLLYDNG---------YLVK------------- 603
Query: 582 EFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAIS 637
++EL+ L + ++ + A ++ L++ + + T V++ LCK + +A S
Sbjct: 604 --MEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFS 657
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 130/322 (40%), Gaps = 78/322 (24%)
Query: 171 PNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSL 230
P+ TFN++IKA C G +D A++VF+ + PDS +YS L+ LC D A +L
Sbjct: 351 PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETL 410
Query: 231 LDEMQIEGTF-------PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNT 283
+E+ + P +N + LC G +A K+ + +G V + +Y T
Sbjct: 411 FNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG-VQDPPSYKT 469
Query: 284 LVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRA-------------- 329
L+ G CR+GK A LL M+ + VP+ T+ L+ G +K G A
Sbjct: 470 LITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSS 529
Query: 330 -----SDGASVLISLEERGH----------------RGNEYIYSSLISGLFKEGKFEHAM 368
+ SVL L +R R N + + ++ LF + E A
Sbjct: 530 YLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAF 589
Query: 369 QLWKEMMEKG------------CE------PNTVVY--------------SALIDGLCRE 396
+ + + + G CE +T+V + +I+GLC+
Sbjct: 590 LIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKH 649
Query: 397 GKADEAREY---LIEMKNKGHL 415
+ EA L+E+ N L
Sbjct: 650 KRHSEAFSLYNELVELGNHQQL 671
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 208/458 (45%), Gaps = 12/458 (2%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRA--LEFYSHVCKS---LNIQPN 172
EKA+NL +M + + V +++ V+ + + L Y + + L++Q
Sbjct: 214 EKALNLIAKMRQDGYQSDFV-NYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQ-- 270
Query: 173 GLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLD 232
N +I K G +A+++ + + T +++ L GR EA +L +
Sbjct: 271 --LVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFE 328
Query: 233 EMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKG 292
E++ G P +N L+ K G L A +V M +G P+E TY+ L+D G
Sbjct: 329 ELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAG 388
Query: 293 KLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYS 352
+ A +L +M A PN F L+ GF +G VL ++ G + + Y+
Sbjct: 389 RWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYN 448
Query: 353 SLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK 412
+I K +HAM + M+ +G EP+ V ++ LID C+ G+ A E M+ +
Sbjct: 449 VVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR 508
Query: 413 GHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEA 472
G LP + TY+ ++ + + + +MK+ N V ++ L++ K+G+ +A
Sbjct: 509 GCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDA 568
Query: 473 MMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILL 532
+ ++M S G+K Y+++I+ + L +Q + F M L+P + N L+
Sbjct: 569 IECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDG--LKPSLLALNSLI 626
Query: 533 NAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
NAF + + A VL M + G PD +T +K L
Sbjct: 627 NAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKAL 664
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 229/483 (47%), Gaps = 7/483 (1%)
Query: 65 GDLSFYSL-IEKLAASS--DFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAV 121
D YSL I+ L S+ D L L ++++R++ + I + K+ P KA+
Sbjct: 230 SDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKAL 289
Query: 122 NLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIK 181
L +A +T + S+++ + G A + + +S I+P +N ++K
Sbjct: 290 QLLGMAQATGLSAKTA-TLVSIISALADSGRTLEAEALFEELRQS-GIKPRTRAYNALLK 347
Query: 182 ALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFP 241
K G + A + + R +PD +TYS L+D GR + A +L EM+ P
Sbjct: 348 GYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQP 407
Query: 242 NPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLL 301
N FVF+ L++ +G+ + +++ M G P+ YN ++D + L+ A++
Sbjct: 408 NSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTF 467
Query: 302 NQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKE 361
++M++ P+ VT+ TL+ K GR + ++E RG Y+ +I+ +
Sbjct: 468 DRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQ 527
Query: 362 GKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTY 421
+++ +L +M +G PN V ++ L+D + G+ ++A E L EMK+ G P+S Y
Sbjct: 528 ERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMY 587
Query: 422 SSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLS 481
++L+ + + G +A+ ++ M ++ + + + LIN ++ + EA V + M
Sbjct: 588 NALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKE 647
Query: 482 RGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNI 541
G+K DVV Y++++ + ++ +M+ + +PD ++L +A
Sbjct: 648 NGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIM--SGCKPDRKARSMLRSALRYMKQT 705
Query: 542 SRA 544
RA
Sbjct: 706 LRA 708
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/512 (21%), Positives = 223/512 (43%), Gaps = 42/512 (8%)
Query: 134 KQTVK--SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQ 191
KQT+ ++N+++ + +AL + + + Q + + ++LVI++L + +D
Sbjct: 192 KQTLTPLTYNALIGACARNNDIEKALNLIAKMRQD-GYQSDFVNYSLVIQSLTRSNKIDS 250
Query: 192 A--VEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVL 249
+ +++ I D + ++ G K G +A+ LL Q G +
Sbjct: 251 VMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSI 310
Query: 250 ISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC 309
ISAL G + A L + + G P YN L+ G + G L A S++++M
Sbjct: 311 ISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGV 370
Query: 310 VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
P++ T+ L+ +V GR VL +E + N +++S L++G G+++ Q
Sbjct: 371 SPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQ 430
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF 429
+ KEM G +P+ Y+ +ID + D A M ++G P+ T+++L+
Sbjct: 431 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI---- 486
Query: 430 EAGDCH-------KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSR 482
DCH A +++ M+ C Y+I+IN + + + +M S+
Sbjct: 487 ---DCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQ 543
Query: 483 GIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNIS 542
GI +VV +++++ + + + ++ +M + L+P YN L+NA+ Q+
Sbjct: 544 GILPNVVTHTTLVDVYGKSGRFNDAIECLEEM--KSVGLKPSSTMYNALINAYAQRGLSE 601
Query: 543 RAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASK 602
+A++ +M G P + L+ L+ + +R A
Sbjct: 602 QAVNAFRVMTSDGLKPSLLA---------------------LNSLINAFGEDRRDAEAFA 640
Query: 603 IIEVMLDRCLLPEASTWAIVVQQLCKPRNIRK 634
+++ M + + P+ T+ +++ L + +K
Sbjct: 641 VLQYMKENGVKPDVVTYTTLMKALIRVDKFQK 672
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 176/365 (48%), Gaps = 40/365 (10%)
Query: 176 FNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQ 235
F+ ++ K G+++ ++ VF I P + L++ L K+ D + +M
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195
Query: 236 IEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLN 295
G N V+NVL+ A K GD +A KL+ M KG P+ TYNTL+ C+K
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHF 255
Query: 296 KAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLI 355
+A+S+ ++M + PN VT+ + +HGF ++GR + + +++ N Y++LI
Sbjct: 256 EALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLI 314
Query: 356 SGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL 415
G + + A++L + M +G P V Y++++ LC +G+ EA L EM K
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIE 374
Query: 416 PNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMV 475
P++ T CN LIN CK ++ A+ V
Sbjct: 375 PDNIT----------------------------CN-------TLINAYCKIEDMVSAVKV 399
Query: 476 WKQMLSRGIKLDVVAYSSMIHGFCNA-QLVDQGMKLFNQMLCQEAELQPDVATYNILLNA 534
K+M+ G+KLD+ +Y ++IHGFC +L + +LF+ + E P ATY+ L++
Sbjct: 400 KKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMI---EKGFSPGYATYSWLVDG 456
Query: 535 FYQQN 539
FY QN
Sbjct: 457 FYNQN 461
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 184/389 (47%), Gaps = 3/389 (0%)
Query: 106 VIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCK 165
V+ + K + +F +M + + +N +++ + G +A + S + +
Sbjct: 173 VLLNSLVKQRLTDTVWKIFKKM-VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEM-E 230
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
+ P+ T+N +I CK + +A+ V + AP+ TY++ + G +EGR+
Sbjct: 231 EKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMR 290
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
EA L E++ + T N + LI C+ D+ A +L + M +G P VTYN+++
Sbjct: 291 EATRLFREIKDDVT-ANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSIL 349
Query: 286 DGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR 345
LC G++ +A LL +M K P+++T TL++ + K V + E G +
Sbjct: 350 RKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLK 409
Query: 346 GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREY 405
+ Y Y +LI G K + E+A + M+EKG P YS L+DG + K DE +
Sbjct: 410 LDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKL 469
Query: 406 LIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCK 465
L E + +G + Y L+R + A ++++ M+ + V ++ + +
Sbjct: 470 LEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWR 529
Query: 466 NGKLMEAMMVWKQMLSRGIKLDVVAYSSM 494
GK+ EA ++ M +R + +++ Y S+
Sbjct: 530 TGKVTEASALFDVMYNRRLMVNLKLYKSI 558
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 205/435 (47%), Gaps = 9/435 (2%)
Query: 111 YGKAHFPEKAVNLFHRMEAEFHC--KQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLN 168
Y KA ++ +F ++ + C K +++ +LN ++++ + + + K L
Sbjct: 143 YAKAGMINDSIVVFEQIRS---CGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVK-LG 198
Query: 169 IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAV 228
+ N +N+++ A K G ++A ++ + + PD +TY+TL+ CK+ EA+
Sbjct: 199 VVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEAL 258
Query: 229 SLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGL 288
S+ D M+ G PN +N I ++G + A +L + N VTY TL+DG
Sbjct: 259 SVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK-DDVTANHVTYTTLIDGY 317
Query: 289 CRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNE 348
CR +++A+ L M + P VT+ +++ + GR + +L + + +
Sbjct: 318 CRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDN 377
Query: 349 YIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIE 408
++LI+ K A+++ K+M+E G + + Y ALI G C+ + + A+E L
Sbjct: 378 ITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFS 437
Query: 409 MKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGK 468
M KG P TYS L+ GF+ + + +E + + Y LI +CK +
Sbjct: 438 MIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQ 497
Query: 469 LMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATY 528
+ A ++++ M +G+ D V +++M + + V + LF+ M + L ++ Y
Sbjct: 498 VDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNR--RLMVNLKLY 555
Query: 529 NILLNAFYQQNNISR 543
+ ++ N++ R
Sbjct: 556 KSISASYAGDNDVLR 570
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 172/363 (47%), Gaps = 7/363 (1%)
Query: 72 LIEKLAASSDFASLEELLQQMKRERRVFIEK-NFIVIFKAYGKAHFPEKAVNLFHRMEAE 130
L+ + S D E+LL +M+ E+ VF + + + Y K +A+++ RME
Sbjct: 209 LVHACSKSGDPEKAEKLLSEME-EKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERS 267
Query: 131 FHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVD 190
V ++NS ++ +EG A + + ++ N +T+ +I C++ +D
Sbjct: 268 GVAPNIV-TYNSFIHGFSREGRMREATRLFREIKD--DVTANHVTYTTLIDGYCRMNDID 324
Query: 191 QAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLI 250
+A+ + + R +P TY++++ LC++GRI EA LL EM + P+ N LI
Sbjct: 325 EALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLI 384
Query: 251 SALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCV 310
+A CK D++ A K+ M G + +Y L+ G C+ +L A L M+
Sbjct: 385 NAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFS 444
Query: 311 PNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQL 370
P T+ LV GF Q + + +L E+RG + +Y LI + K + ++A L
Sbjct: 445 PGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVL 504
Query: 371 WKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFE 430
++ M +KG ++V+++ + R GK EA M N+ + N Y S+ +
Sbjct: 505 FESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASY-- 562
Query: 431 AGD 433
AGD
Sbjct: 563 AGD 565
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 142/294 (48%), Gaps = 13/294 (4%)
Query: 280 TYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVT--FGTLVHGFVKQGRASDGASVLI 337
T + L+D L ++ L+ + L + + P DV+ F L+ + K G +D V
Sbjct: 98 TAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFE 157
Query: 338 SLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREG 397
+ G + + + L++ L K+ + +++K+M++ G N VY+ L+ + G
Sbjct: 158 QIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSG 217
Query: 398 KADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYS 457
++A + L EM+ KG P+ FTY++L+ + + +A+ V M+ + N V Y+
Sbjct: 218 DPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYN 277
Query: 458 ILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVA----YSSMIHGFCNAQLVDQGMKLFNQ 513
I+G + G++ EA L R IK DV A Y+++I G+C +D+ ++L
Sbjct: 278 SFIHGFSREGRMREA-----TRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREV 332
Query: 514 MLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
M + P V TYN +L + I A +L M + +PD ITC+ +
Sbjct: 333 M--ESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLI 384
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 136/522 (26%), Positives = 241/522 (46%), Gaps = 55/522 (10%)
Query: 119 KAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNL 178
KAV++F++M + V +S+L Q G+F A + + + NI + + +N+
Sbjct: 344 KAVDVFNKMLKKRKRINCV-IVSSILQCYCQMGNFSEAYDLFKEF-RETNISLDRVCYNV 401
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG 238
AL K+G V++A+E+FR + + APD Y+TL+ G C +G+ +A L+ EM G
Sbjct: 402 AFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTG 461
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAV 298
P+ ++NVL L G A + + M +G P VT+N +++GL G+L+KA
Sbjct: 462 KTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAE 521
Query: 299 SLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGL 358
+ + +K ND ++V GF G I LE + +Y +L + L
Sbjct: 522 AFYESL-EHKSREND---ASMVKGFCAAGCLDHAFERFIRLEFPLPKS---VYFTLFTSL 574
Query: 359 FKEGKF-EHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
E + A L M + G EP +Y LI CR +ARE+ + K +P+
Sbjct: 575 CAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPD 634
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
FTY+ ++ + + +A ++++MK + V YS+L+N + + +
Sbjct: 635 LFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKR 687
Query: 478 QMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQ 537
+M + + DVV Y+ MI+ +C+ + + LF M + E+ PDV TY +LL
Sbjct: 688 EMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDM--KRREIVPDVVTYTVLLKN-KP 744
Query: 538 QNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRT 597
+ N+SR M + + D+F T+ L+ Q
Sbjct: 745 ERNLSREMKAFD-----------VKPDVFYYTV--------------------LIDWQCK 773
Query: 598 IG----ASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKA 635
IG A +I + M++ + P+A+ + ++ CK +++A
Sbjct: 774 IGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEA 815
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/508 (21%), Positives = 221/508 (43%), Gaps = 49/508 (9%)
Query: 81 DFASLEELLQQMKRERRVFIEKN-FIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKS 139
+F+ +L ++ RE + +++ + V F A GK E+A+ LF M + V +
Sbjct: 376 NFSEAYDLFKEF-RETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGK-GIAPDVIN 433
Query: 140 FNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGI 199
+ +++ +G A + + P+ + +N++ L GL +A E + +
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEM-DGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMM 492
Query: 200 HLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQ------------------------ 235
R P T++ +++GL G +D+A + + ++
Sbjct: 493 ENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAF 552
Query: 236 ---IEGTFPNP-FVFNVLISALCKKGDLI-RAAKLVDNMSLKGCVPNEVTYNTLVDGLCR 290
I FP P V+ L ++LC + D I +A L+D M G P + Y L+ CR
Sbjct: 553 ERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCR 612
Query: 291 KGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYI 350
+ KA +V K VP+ T+ +++ + + ++ ++ R + +
Sbjct: 613 VNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVT 672
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
YS L++ + + + +EM P+ V Y+ +I+ C + +MK
Sbjct: 673 YSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMK 725
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
+ +P+ TY+ L++ E + +EMK + Y++LI+ CK G L
Sbjct: 726 RREIVPDVVTYTVLLKNKPERN-------LSREMKAFDVKPDVFYYTVLIDWQCKIGDLG 778
Query: 471 EAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNI 530
EA ++ QM+ G+ D Y+++I C + + +F++M+ E+ ++PDV Y
Sbjct: 779 EAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMI--ESGVKPDVVPYTA 836
Query: 531 LLNAFYQQNNISRAMDVLNIMLDQGCDP 558
L+ + + +A+ ++ ML++G P
Sbjct: 837 LIAGCCRNGFVLKAVKLVKEMLEKGIKP 864
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 104/471 (22%), Positives = 213/471 (45%), Gaps = 20/471 (4%)
Query: 173 GLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLD 232
G+ + V++ LC ++ A V + PD Y YS +++G K I +AV + +
Sbjct: 291 GIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFN 350
Query: 233 EMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKG 292
+M + N + + ++ C+ G+ A L + V YN D L + G
Sbjct: 351 KMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLG 410
Query: 293 KLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYS 352
K+ +A+ L +M P+ + + TL+ G QG+ SD ++I ++ G + IY+
Sbjct: 411 KVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYN 470
Query: 353 SLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK 412
L GL G + A + K M +G +P V ++ +I+GL G+ D+A + +++K
Sbjct: 471 VLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHK 530
Query: 413 GHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLC-KNGKLME 471
+ +S+++GF AG A ++ + Y L LC + + +
Sbjct: 531 SREND----ASMVKGFCAAGCLDHA---FERFIRLEFPLPKSVYFTLFTSLCAEKDYISK 583
Query: 472 AMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNIL 531
A + +M G++ + Y +I +C V + + F ++ + ++ PD+ TY I+
Sbjct: 584 AQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTK--KIVPDLFTYTIM 641
Query: 532 LNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRD-NMNPPQDGREFLDELVVR 590
+N + + N +A + M + PD +T + L + + +M + + + ++V
Sbjct: 642 INTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYY 701
Query: 591 LVKRQRTIGASKIIEV------MLDRCLLPEASTWAIVVQQLCKP-RNIRK 634
+ R + + +V M R ++P+ T+ ++++ KP RN+ +
Sbjct: 702 TIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN--KPERNLSR 750
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 173/385 (44%), Gaps = 9/385 (2%)
Query: 169 IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAV 228
I P+ ++ +I+ K + +AV+VF + + + S+++ C+ G EA
Sbjct: 322 IDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAY 381
Query: 229 SLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGL 288
L E + + +NV AL K G + A +L M+ KG P+ + Y TL+ G
Sbjct: 382 DLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGC 441
Query: 289 CRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNE 348
C +GK + A L+ +M P+ V + L G G A + L +E RG +
Sbjct: 442 CLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTY 501
Query: 349 YIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIE 408
++ +I GL G+ + A ++ + K E + ++++ G C G D A E I
Sbjct: 502 VTHNMVIEGLIDAGELDKAEAFYESLEHKSREND----ASMVKGFCAAGCLDHAFERFIR 557
Query: 409 MKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGK 468
++ LP S ++ E KA + M + Y LI C+
Sbjct: 558 LEFP--LPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNN 615
Query: 469 LMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATY 528
+ +A ++ ++++ I D+ Y+ MI+ +C Q LF M + +++PDV TY
Sbjct: 616 VRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDM--KRRDVKPDVVTY 673
Query: 529 NILLNAFYQQNNISRAMDVLNIMLD 553
++LLN+ + ++ R M+ +++ D
Sbjct: 674 SVLLNS-DPELDMKREMEAFDVIPD 697
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 178/397 (44%), Gaps = 29/397 (7%)
Query: 134 KQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAV 193
K T + N V+ +I G +A FY +SL + ++V K C G +D A
Sbjct: 498 KPTYVTHNMVIEGLIDAGELDKAEAFY----ESLEHKSRENDASMV-KGFCAAGCLDHAF 552
Query: 194 EVFRGIHLRNCAPDSYTYSTLMDGLCKE-GRIDEAVSLLDEMQIEGTFPNPFVFNVLISA 252
E F I L P S Y TL LC E I +A LLD M G P ++ LI A
Sbjct: 553 ERF--IRLEFPLPKS-VYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGA 609
Query: 253 LCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPN 312
C+ ++ +A + + + K VP+ TY +++ CR + +A +L M P+
Sbjct: 610 WCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPD 669
Query: 313 DVTFGTLVHGF--VKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQL 370
VT+ L++ + R + V+ + Y+ +I+ + L
Sbjct: 670 VVTYSVLLNSDPELDMKREMEAFDVIPDV---------VYYTIMINRYCHLNDLKKVYAL 720
Query: 371 WKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFE 430
+K+M + P+ V Y+ L+ K R EMK P+ F Y+ L+ +
Sbjct: 721 FKDMKRREIVPDVVTYTVLL-------KNKPERNLSREMKAFDVKPDVFYYTVLIDWQCK 773
Query: 431 AGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVA 490
GD +A ++ +M + + + Y+ LI CK G L EA M++ +M+ G+K DVV
Sbjct: 774 IGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVP 833
Query: 491 YSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVAT 527
Y+++I G C V + +KL +ML E ++P A+
Sbjct: 834 YTALIAGCCRNGFVLKAVKLVKEML--EKGIKPTKAS 868
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/570 (22%), Positives = 223/570 (39%), Gaps = 113/570 (19%)
Query: 179 VIKALCKVGLVDQAVEVF-RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
++KA + + D+A+++F R + APD + L+ + GR D V E++
Sbjct: 152 LVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERL 211
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G + + +++ AL + D KL+ + + V Y ++GLC + A
Sbjct: 212 GLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIA 271
Query: 298 VSLLNQMV-ANKCVPND---VTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSS 353
LL + AN V + + +V G + R D SV++ +E+ G + Y+YS+
Sbjct: 272 YFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSA 331
Query: 354 LISGLFKE-----------------------------------GKFEHAMQLWKEMMEKG 378
+I G K G F A L+KE E
Sbjct: 332 IIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETN 391
Query: 379 CEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAI 438
+ V Y+ D L + GK +EA E EM KG P+ Y++L+ G G C A
Sbjct: 392 ISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAF 451
Query: 439 LVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAY------- 491
+ EM + V Y++L GL NG EA K M +RG+K V +
Sbjct: 452 DLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGL 511
Query: 492 ------------------------SSMIHGFCNAQLVDQGMKLFNQM------------- 514
+SM+ GFC A +D + F ++
Sbjct: 512 IDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLF 571
Query: 515 --LCQEAE----------------LQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGC 556
LC E + ++P+ + Y L+ A+ + NN+ +A + I++ +
Sbjct: 572 TSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKI 631
Query: 557 DPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKII----EVMLDRCL 612
PD T I + T +N P+ +++ R VK + S ++ E+ + R +
Sbjct: 632 VPDLFTYTIMINTYC-RLNEPKQAYALFEDMKRRDVKPD-VVTYSVLLNSDPELDMKREM 689
Query: 613 -----LPEASTWAIVVQQLCKPRNIRKAIS 637
+P+ + I++ + C +++K +
Sbjct: 690 EAFDVIPDVVYYTIMINRYCHLNDLKKVYA 719
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 139/309 (44%), Gaps = 16/309 (5%)
Query: 116 FPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLT 175
+ KA +L RM + + + ++ + + +A EF+ + + I P+ T
Sbjct: 580 YISKAQDLLDRM-WKLGVEPEKSMYGKLIGAWCRVNNVRKAREFF-EILVTKKIVPDLFT 637
Query: 176 FNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQ 235
+ ++I C++ QA +F + R+ PD TYS L++ D + + EM+
Sbjct: 638 YTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREME 690
Query: 236 IEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLN 295
P+ + ++I+ C DL + L +M + VP+ VTY L+ K K
Sbjct: 691 AFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLL-----KNKPE 745
Query: 296 KAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLI 355
+ +S +M A P+ + L+ K G + + + E G + Y++LI
Sbjct: 746 RNLS--REMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALI 803
Query: 356 SGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL 415
+ K G + A ++ M+E G +P+ V Y+ALI G CR G +A + + EM KG
Sbjct: 804 ACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIK 863
Query: 416 PNSFTYSSL 424
P + S++
Sbjct: 864 PTKASLSAV 872
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 106/251 (42%), Gaps = 37/251 (14%)
Query: 103 NFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSH 162
+ ++ Y + + P++A LF M+ K V +++ +LN E R +E
Sbjct: 637 TYTIMINTYCRLNEPKQAYALFEDMKRR-DVKPDVVTYSVLLNSD-PELDMKREME---- 690
Query: 163 VCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPD--SYT---------- 210
+ ++ P+ + + ++I C + + + +F+ + R PD +YT
Sbjct: 691 ---AFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERN 747
Query: 211 ----------------YSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALC 254
Y+ L+D CK G + EA + D+M G P+ + LI+ C
Sbjct: 748 LSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCC 807
Query: 255 KKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDV 314
K G L A + D M G P+ V Y L+ G CR G + KAV L+ +M+ P
Sbjct: 808 KMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKA 867
Query: 315 TFGTLVHGFVK 325
+ + + +K
Sbjct: 868 SLSAVHYAKLK 878
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 167/347 (48%)
Query: 169 IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAV 228
I P+ + ++VI L K VD AV + I P Y+ +++G+CKEGR +E++
Sbjct: 435 ILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESL 494
Query: 229 SLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGL 288
LL EM+ G P+ F N + L ++ D + A L+ M G P LV L
Sbjct: 495 KLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKL 554
Query: 289 CRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNE 348
C G+ A L+ + + + V + G +K G + + GH +
Sbjct: 555 CENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDV 614
Query: 349 YIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIE 408
Y LI L K + A L+ EM+ KG +P Y+++IDG C+EG+ D ++
Sbjct: 615 IAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVR 674
Query: 409 MKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGK 468
M P+ TY+SL+ G +G +AI W EMK C N + + LI GLCK G
Sbjct: 675 MYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGW 734
Query: 469 LMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
EA++ +++M + ++ D Y S++ F +++ ++ G +F +M+
Sbjct: 735 SGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMV 781
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 175/361 (48%), Gaps = 6/361 (1%)
Query: 200 HLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDL 259
H + PDS + S +++ L K ++D AV+LL ++ G P P ++N +I +CK+G
Sbjct: 431 HNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRS 490
Query: 260 IRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVP--NDVTFG 317
+ KL+ M G P++ T N + L + A+ LL +M P TF
Sbjct: 491 EESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTF- 549
Query: 318 TLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEK 377
LV + GRA D L + G G+ ++ I GL K + ++L++++
Sbjct: 550 -LVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICAN 608
Query: 378 GCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKA 437
G P+ + Y LI LC+ + EA EM +KG P TY+S++ G+ + G+ +
Sbjct: 609 GHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRG 668
Query: 438 ILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHG 497
+ M + N + + Y+ LI+GLC +G+ EA+ W +M + + + + ++I G
Sbjct: 669 LSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQG 728
Query: 498 FCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCD 557
C + + F +M +E E++PD A Y L+++F NI+ + M+ +G
Sbjct: 729 LCKCGWSGEALVYFREM--EEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRF 786
Query: 558 P 558
P
Sbjct: 787 P 787
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/535 (21%), Positives = 240/535 (44%), Gaps = 56/535 (10%)
Query: 79 SSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVK 138
SS +E L++M+ F + + + Y E+A+++F+ + + + +
Sbjct: 192 SSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS 251
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRG 198
+ V + G +A E + + +I+ N T+ ++I K +D+A ++F
Sbjct: 252 TILVV--SFCKWGQVDKAFELIEML-EERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEK 308
Query: 199 IHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGD 258
+ D Y L+ GLCK ++ A+SL E++ G P+ + L+ + ++ +
Sbjct: 309 MRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESE 368
Query: 259 LIRAAKLV----DNMSL------------------------------------------- 271
L R +++ D S+
Sbjct: 369 LSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLL 428
Query: 272 ----KGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQG 327
K +P+ + + +++ L + K++ AV+LL+ +V N +P + + ++ G K+G
Sbjct: 429 KDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEG 488
Query: 328 RASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYS 387
R+ + +L +++ G +++ + + L + F A+ L K+M G EP +
Sbjct: 489 RSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTT 548
Query: 388 ALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNN 447
L+ LC G+A +A +YL ++ +G L + ++ + G + + + +++++ N
Sbjct: 549 FLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICAN 608
Query: 448 SCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQG 507
+ + Y +LI LCK + MEA +++ +M+S+G+K V Y+SMI G+C +D+G
Sbjct: 609 GHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRG 668
Query: 508 MKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
+ +M E E PDV TY L++ S A+ N M + C P+ IT
Sbjct: 669 LSCIVRM--YEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRIT 721
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 116/517 (22%), Positives = 216/517 (41%), Gaps = 80/517 (15%)
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRG 198
+ VL V G RAL ++ + + + T +++ + CK G VD+A E+
Sbjct: 216 TLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIST--ILVVSFCKWGQVDKAFELIEM 273
Query: 199 IHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGD 258
+ R+ + TY L+ G KE RID+A L ++M+ G + +++VLI LCK D
Sbjct: 274 LEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKD 333
Query: 259 LIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
L A L + G P+ L+ + +L++ ++ + K V + + +
Sbjct: 334 LEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVM--LLYKS 391
Query: 319 LVHGFVKQ---------------GRASDGASVLISLEERGHRG---NEYIYSSLISGLFK 360
L GF++ SDG S ++ L + ++ + S +I+ L K
Sbjct: 392 LFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVK 451
Query: 361 EGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFT 420
K + A+ L ++++ G P ++Y+ +I+G+C+EG+++E+ + L EMK+ G P+ FT
Sbjct: 452 ANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFT 511
Query: 421 YSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQML 480
+ + E D A+ + K+M+ + L+ LC+NG+ ++A +
Sbjct: 512 LNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVA 571
Query: 481 SRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNN 540
G +VA ++ I G + VD+G++LF +
Sbjct: 572 GEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICAN----------------------- 608
Query: 541 ISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGA 600
G PD I + +K L K RT+ A
Sbjct: 609 --------------GHCPDVIAYHVLIKAL---------------------CKACRTMEA 633
Query: 601 SKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAIS 637
+ M+ + L P +T+ ++ CK I + +S
Sbjct: 634 DILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLS 670
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 165/386 (42%), Gaps = 39/386 (10%)
Query: 70 YSLIEKLAASSDFASLEELLQQMKRERRVFI--EKNFIVIFKAYGKAHFPEKAVNLFHRM 127
YS I+ L + + + E+++ +K + + + ++ KA+ + AV L H +
Sbjct: 406 YSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDI 465
Query: 128 EAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN---------- 177
+ +N+++ + +EG +L+ + K ++P+ T N
Sbjct: 466 VQNGLIPGPMM-YNNIIEGMCKEGRSEESLKLLGEM-KDAGVEPSQFTLNCIYGCLAERC 523
Query: 178 -------------------------LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYS 212
++K LC+ G A + + +
Sbjct: 524 DFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVAST 583
Query: 213 TLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLK 272
+DGL K +D + L ++ G P+ ++VLI ALCK + A L + M K
Sbjct: 584 AAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSK 643
Query: 273 GCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDG 332
G P TYN+++DG C++G++++ +S + +M ++ P+ +T+ +L+HG GR S+
Sbjct: 644 GLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEA 703
Query: 333 ASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDG 392
++ + N + +LI GL K G A+ ++EM EK EP++ VY +L+
Sbjct: 704 IFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSS 763
Query: 393 LCREGKADEAREYLIEMKNKGHLPNS 418
+ EM +KG P S
Sbjct: 764 FLSSENINAGFGIFREMVHKGRFPVS 789
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%)
Query: 180 IKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGT 239
I L K VD+ +E+FR I PD Y L+ LCK R EA L +EM +G
Sbjct: 586 IDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGL 645
Query: 240 FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVS 299
P +N +I CK+G++ R + M P+ +TY +L+ GLC G+ ++A+
Sbjct: 646 KPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIF 705
Query: 300 LLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
N+M C PN +TF L+ G K G + + +EE+ + +Y SL+S
Sbjct: 706 RWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFL 765
Query: 360 KEGKFEHAMQLWKEMMEKGCEPNTV 384
+++EM+ KG P +V
Sbjct: 766 SSENINAGFGIFREMVHKGRFPVSV 790
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 122/259 (47%), Gaps = 14/259 (5%)
Query: 318 TLVHGFVKQGRAS---DGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEM 374
T+++GF + G A + AS ++ G+R + Y Y+++ S L + + L ++
Sbjct: 78 TVLNGFKRWGLAYLFFNWAS-----KQEGYRNDMYAYNAMASILSRARQNASLKALVVDV 132
Query: 375 MEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGH-LPNSFTYSSLMRGFFEAGD 433
+ C + + I L G DEA ++ G +PN++TY+ L+ ++
Sbjct: 133 LNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNS 192
Query: 434 CHKAIL--VWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAY 491
++ KEM++ + ++ + ++ C GK A+ V+ ++LSRG LD
Sbjct: 193 SSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGW-LDEHIS 251
Query: 492 SSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIM 551
+ ++ FC VD+ +L + +E +++ + TY +L++ F +++ I +A + M
Sbjct: 252 TILVVSFCKWGQVDKAFELIEML--EERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKM 309
Query: 552 LDQGCDPDFITCDIFLKTL 570
G + D D+ + L
Sbjct: 310 RRMGMNADIALYDVLIGGL 328
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 106 VIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCK 165
V+ KA KA +A LF+ M ++ K TV ++NS+++ +EG R L + +
Sbjct: 619 VLIKALCKACRTMEADILFNEMVSK-GLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYE 677
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
P+ +T+ +I LC G +A+ + + ++C P+ T+ L+ GLCK G
Sbjct: 678 D-EKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSG 736
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
EA+ EM+ + P+ V+ L+S+ ++ + M KG P V N ++
Sbjct: 737 EALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYML 796
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 181/374 (48%), Gaps = 2/374 (0%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+K + +F R++ E TV ++ ++N+ + G +ALE S V K ++ N T++
Sbjct: 466 KKGLVVFKRLK-ECGFTPTVVTYGCLINLYTKVGKISKALEV-SRVMKEEGVKHNLKTYS 523
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
++I K+ A VF + PD Y+ ++ C G +D A+ + EMQ
Sbjct: 524 MMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL 583
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
P F +I K GD+ R+ ++ D M GCVP T+N L++GL K ++ KA
Sbjct: 584 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKA 643
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
V +L++M N+ T+ ++ G+ G L+ G + + Y +L+
Sbjct: 644 VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKA 703
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
K G+ + A+ + KEM + N+ VY+ LIDG R G EA + + +MK +G P+
Sbjct: 704 CCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPD 763
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
TY+S + +AGD ++A +EM+ N Y+ LI G + +A+ ++
Sbjct: 764 IHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYE 823
Query: 478 QMLSRGIKLDVVAY 491
+M + GIK D Y
Sbjct: 824 EMKAMGIKPDKAVY 837
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 183/387 (47%), Gaps = 2/387 (0%)
Query: 165 KSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRI 224
K P +T+ +I KVG + +A+EV R + + TYS +++G K
Sbjct: 476 KECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDW 535
Query: 225 DEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTL 284
A ++ ++M EG P+ ++N +ISA C G++ RA + V M P T+ +
Sbjct: 536 ANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPI 595
Query: 285 VDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGH 344
+ G + G + +++ + + M CVP TF L++G V++ + +L + G
Sbjct: 596 IHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGV 655
Query: 345 RGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE 404
NE+ Y+ ++ G G A + + + +G + + Y AL+ C+ G+ A
Sbjct: 656 SANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALA 715
Query: 405 YLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLC 464
EM + NSF Y+ L+ G+ GD +A + ++MK + Y+ I+
Sbjct: 716 VTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACS 775
Query: 465 KNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPD 524
K G + A ++M + G+K ++ Y+++I G+ A L ++ + + +M + ++PD
Sbjct: 776 KAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEM--KAMGIKPD 833
Query: 525 VATYNILLNAFYQQNNISRAMDVLNIM 551
A Y+ LL + + +I+ A +M
Sbjct: 834 KAVYHCLLTSLLSRASIAEAYIYSGVM 860
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/468 (21%), Positives = 208/468 (44%), Gaps = 34/468 (7%)
Query: 133 CKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQA 192
K + F ++ + G HRA E + + ++ I P + +I A +D+A
Sbjct: 305 SKPSRTEFGLMVKFYGRRGDMHRARETFERM-RARGITPTSRIYTSLIHAYAVGRDMDEA 363
Query: 193 VEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISA 252
+ R + TYS ++ G K G + A DE + N ++ +I A
Sbjct: 364 LSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYA 423
Query: 253 LCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPN 312
C+ ++ RA LV M +G Y+T++DG K + + ++ P
Sbjct: 424 HCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPT 483
Query: 313 DVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWK 372
VT+G L++ + K G+ S V ++E G + N YS +I+G K + +A +++
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFE 543
Query: 373 EMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAG 432
+M+++G +P+ ++Y+ +I C G D A + + EM+ H P + T+ ++ G+ ++G
Sbjct: 544 DMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSG 603
Query: 433 DCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYS 492
D +++ V+ M+ C ++ LINGL + ++ +A+ + +M G+ + Y+
Sbjct: 604 DMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYT 663
Query: 493 SMIHGFCNAQLVDQGMKLFNQML------------------CQEAELQPDVA-------- 526
++ G+ + + + F ++ C+ +Q +A
Sbjct: 664 KIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR 723
Query: 527 -------TYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
YNIL++ + ++ ++ A D++ M +G PD T F+
Sbjct: 724 NIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFI 771
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/488 (20%), Positives = 214/488 (43%), Gaps = 4/488 (0%)
Query: 81 DFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSF 140
D E ++M+ + + + AY ++A++ +M+ E + ++ ++
Sbjct: 324 DMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEE-GIEMSLVTY 382
Query: 141 NSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIH 200
+ ++ + GH A +++ K ++ N + +I A C+ +++A + R +
Sbjct: 383 SVIVGGFSKAGHAE-AADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREME 441
Query: 201 LRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLI 260
Y T+MDG + + + ++ G P + LI+ K G +
Sbjct: 442 EEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKIS 501
Query: 261 RAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLV 320
+A ++ M +G N TY+ +++G + A ++ MV P+ + + ++
Sbjct: 502 KALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNII 561
Query: 321 HGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCE 380
F G + +++ HR + +I G K G +++++ M GC
Sbjct: 562 SAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCV 621
Query: 381 PNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILV 440
P ++ LI+GL + + ++A E L EM G N TY+ +M+G+ GD KA
Sbjct: 622 PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEY 681
Query: 441 WKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCN 500
+ ++N + + Y L+ CK+G++ A+ V K+M +R I + Y+ +I G+
Sbjct: 682 FTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWAR 741
Query: 501 AQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDF 560
V + L QM ++ ++PD+ TY ++A + +++RA + M G P+
Sbjct: 742 RGDVWEAADLIQQM--KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNI 799
Query: 561 ITCDIFLK 568
T +K
Sbjct: 800 KTYTTLIK 807
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 128/306 (41%), Gaps = 23/306 (7%)
Query: 331 DGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALI 390
D +IS E+ + + + ++ + G A + ++ M +G P + +Y++LI
Sbjct: 292 DNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLI 351
Query: 391 DGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCN 450
DEA + +MK +G + TYS ++ GF +AG A + E K
Sbjct: 352 HAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKT 411
Query: 451 HNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKL 510
N Y +I C+ + A + ++M GI + Y +M+ G+ +G+ +
Sbjct: 412 LNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVV 471
Query: 511 FNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
F ++ +E P V TY L+N + + IS+A++V +M ++G + T +
Sbjct: 472 FKRL--KECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSM----- 524
Query: 571 RDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPR 630
++ VK + A + E M+ + P+ + ++ C
Sbjct: 525 ----------------MINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMG 568
Query: 631 NIRKAI 636
N+ +AI
Sbjct: 569 NMDRAI 574
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 195/381 (51%), Gaps = 8/381 (2%)
Query: 120 AVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKS-LNIQPNGLTFNL 178
A +LF+ + A +K NSVL + ++ + H+ KS N +P TF +
Sbjct: 68 AKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLI 127
Query: 179 VIKALCKVGLVDQAVE-VFRGIHL---RNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEM 234
++ C+ D ++ V R ++L PD T + LC+ GR+DEA L+ E+
Sbjct: 128 LLSHACRAP--DSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKEL 185
Query: 235 QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCV-PNEVTYNTLVDGLCRKGK 293
+ + P+ + +N L+ LCK DL + VD M V P+ V++ L+D +C
Sbjct: 186 TEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKN 245
Query: 294 LNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSS 353
L +A+ L++++ P+ + T++ GF + S+ V ++E G ++ Y++
Sbjct: 246 LREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNT 305
Query: 354 LISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKG 413
LI GL K G+ E A K M++ G EP+T Y++L++G+CR+G++ A L EM+ +G
Sbjct: 306 LIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARG 365
Query: 414 HLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAM 473
PN TY++L+ G +A K + +++ MK++ Y+ L+ L K+GK+ EA
Sbjct: 366 CAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAY 425
Query: 474 MVWKQMLSRGIKLDVVAYSSM 494
V+ + D AYS++
Sbjct: 426 EVFDYAVDSKSLSDASAYSTL 446
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 156/349 (44%), Gaps = 29/349 (8%)
Query: 294 LNKAVSLLNQMVANKCVPNDVTF-GTLVHGFVKQGRASDGASVL--ISLEERGHRGNEYI 350
L+ A SL N + A +P D+ F +++ + +D + I + R
Sbjct: 65 LSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRST 124
Query: 351 YSSLISGLFK--EGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIE 408
+ L+S + + + ++ M+ G EP+ V + LC G+ DEA++ + E
Sbjct: 125 FLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKE 184
Query: 409 MKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNN-SCNHNEVCYSILINGLCKNG 467
+ K P+++TY+ L++ + D H EM+++ + V ++ILI+ +C +
Sbjct: 185 LTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSK 244
Query: 468 KLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVAT 527
L EAM + ++ + G K D Y++++ GFC + + ++ +M +E ++PD T
Sbjct: 245 NLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM--KEEGVEPDQIT 302
Query: 528 YNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDEL 587
YN L+ + + A L M+D G +PD T L
Sbjct: 303 YNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTAT---------------------YTSL 341
Query: 588 VVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
+ + ++ ++GA ++E M R P T+ ++ LCK R + K +
Sbjct: 342 MNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGM 390
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 124/298 (41%), Gaps = 40/298 (13%)
Query: 276 PNEVTYNTLVDGLCR--KGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGA 333
P T+ L+ CR ++ +LN MV N P+ VT V + GR +
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 334 SVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEK-GCEPNTVVYSALIDG 392
++ L E+ + Y Y+ L+ L K + EM + +P+ V ++ LID
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 393 LCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHN 452
+C EA + ++ N G P+ F Y+++M+GF
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGF------------------------ 275
Query: 453 EVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFN 512
C K EA+ V+K+M G++ D + Y+++I G A V++
Sbjct: 276 -----------CTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 513 QMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
M+ +A +PD ATY L+N ++ A+ +L M +GC P+ T + L L
Sbjct: 325 TMV--DAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGL 380
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 125/497 (25%), Positives = 239/497 (48%), Gaps = 11/497 (2%)
Query: 117 PEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTF 176
+ A + + AE C +V + N+ + ++ R + Y + SL N TF
Sbjct: 164 AQGAYEVIEQTRAEGFC-VSVHALNNFMGCLLNVNEIDRFWKVYKEM-DSLGYVENVNTF 221
Query: 177 NLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEM-Q 235
NLVI + CK + +A+ VF + P+ +++ ++DG CK G + A+ LL +M
Sbjct: 222 NLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGM 281
Query: 236 IEGTF--PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGK 293
+ G F PN +N +I+ CK G L A ++ +M G NE TY LVD R G
Sbjct: 282 MSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGS 341
Query: 294 LNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSS 353
++A+ L ++M + V N V + ++V+ +G SVL + + + + + +
Sbjct: 342 SDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAI 401
Query: 354 LISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKG 413
++ GL + G + A++ +++ EK + V ++ L+ R+ K A + L M +G
Sbjct: 402 VVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQG 461
Query: 414 HLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAM 473
++ ++ +L+ G+ + G +A+ ++ M + N V Y+ ++NGL K G A
Sbjct: 462 LSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAE 521
Query: 474 MVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLN 533
V M + D+V Y+++++ V++ + ++M Q+ E + T+NI++N
Sbjct: 522 AVVNAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMIN 577
Query: 534 AFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVK 593
+ + +A +VL M+++G PD IT + + + + E D L+++ V
Sbjct: 578 HLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKH-RSQEKVVELHDYLILQGVT 636
Query: 594 RQRTIGASKIIEVMLDR 610
I S I+ +LDR
Sbjct: 637 PHEHIYLS-IVRPLLDR 652
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/496 (23%), Positives = 218/496 (43%), Gaps = 55/496 (11%)
Query: 175 TFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEM 234
F+ +++A + G A EV + + M L ID + EM
Sbjct: 150 VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEM 209
Query: 235 QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKL 294
G N FN++I + CK+ L A + M G PN V++N ++DG C+ G +
Sbjct: 210 DSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDM 269
Query: 295 NKAVSLLNQ---MVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIY 351
A+ LL + M N PN VT+ ++++GF K GR + + + G NE Y
Sbjct: 270 RFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTY 329
Query: 352 SSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKN 411
+L+ + G + A++L EM KG NTV+Y++++ L EG + A L +M +
Sbjct: 330 GALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNS 389
Query: 412 KGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLME 471
K + FT + ++RG G +A+ +++ + VC++ L++ ++ KL
Sbjct: 390 KNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLAC 449
Query: 472 AMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML---------------- 515
A + ML +G+ LD +++ ++I G+ +++ +++++ M+
Sbjct: 450 ADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVN 509
Query: 516 ---------CQEAELQP----DVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDP--DF 560
EA + D+ TYN LLN + N+ A D+L+ M Q +
Sbjct: 510 GLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSL 569
Query: 561 ITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWA 620
+T +I ++ L K A ++++ M++R ++P++ T+
Sbjct: 570 VTFNI---------------------MINHLCKFGSYEKAKEVLKFMVERGVVPDSITYG 608
Query: 621 IVVQQLCKPRNIRKAI 636
++ K R+ K +
Sbjct: 609 TLITSFSKHRSQEKVV 624
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 117/276 (42%), Gaps = 17/276 (6%)
Query: 377 KGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHK 436
+ C + V+ +L+ + G A A E + + + +G + ++ M + +
Sbjct: 142 QACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDR 201
Query: 437 AILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIH 496
V+KEM + N ++++I CK KL EA+ V+ +ML G+ +VV+++ MI
Sbjct: 202 FWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMID 261
Query: 497 GFCNAQLVDQGMKLFNQMLCQEAE-LQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQG 555
G C + ++L +M + P+ TYN ++N F + + A + M+ G
Sbjct: 262 GACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSG 321
Query: 556 CDPDFITCDIFLKTLRDNMNPPQDGREFLDE-----LVVRLVKRQRTI----------GA 600
D + T + + DE LVV V + GA
Sbjct: 322 VDCNERTYGALVDAY-GRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGA 380
Query: 601 SKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
++ M + + + T AIVV+ LC+ +++A+
Sbjct: 381 MSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAV 416
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/498 (25%), Positives = 220/498 (44%), Gaps = 50/498 (10%)
Query: 113 KAHFPEKAVNLFHRMEAEFHCKQTVKSF--NSVLNVIIQEGHFHRALEFY---------- 160
K+ + AV +F M H V SF N + V+++E F A Y
Sbjct: 21 KSGMIDNAVQVFDEMR---HSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSL 77
Query: 161 ---------SHVCK---------------SLNIQPNGLTFNLVIKALCKVGLVDQAVEVF 196
S +CK +L P+ FN+ + LC+ V AV+ F
Sbjct: 78 IPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTF 137
Query: 197 RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
+ R PD +Y+ L++GL + G++ +AV + + M G P+ L+ LC
Sbjct: 138 FCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHA 197
Query: 257 GDLIRAAKLV-DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVT 315
+ A ++V + + + V YN L+ G C+ G++ KA +L + M C P+ VT
Sbjct: 198 RKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVT 257
Query: 316 FGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM 375
+ L++ + V+ + G + + Y Y+ L+ + + H + + M
Sbjct: 258 YNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLK---RHCRVSHPDKCY-NFM 313
Query: 376 EKGCEP----NTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEA 431
K EP + V YS LI+ CR +A EM+ KG + N TY+SL++ F
Sbjct: 314 VKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLRE 373
Query: 432 GDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAY 491
G+ A + +M + + + Y+ +++ LCK+G + +A V+ M+ I D ++Y
Sbjct: 374 GNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISY 433
Query: 492 SSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIM 551
+S+I G C + V + +KLF M + E PD T+ ++ + +S A V + M
Sbjct: 434 NSLISGLCRSGRVTEAIKLFEDM--KGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQM 491
Query: 552 LDQGCDPDFITCDIFLKT 569
+D+G D D +K
Sbjct: 492 MDKGFTLDRDVSDTLIKA 509
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 223/469 (47%), Gaps = 34/469 (7%)
Query: 174 LTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDE 233
L + I L K G++D AV+VF + + S+ Y+ + L +E R + A ++ +
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 234 MQIEGTFPNPFVFNVLISALC--KKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRK 291
M+ G PF ++ IS LC KK DLI A L+ +M G +P+ +N +D LCR+
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDA--LLSDMETLGFIPDIWAFNVYLDLLCRE 127
Query: 292 GKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIY 351
K+ AV MV P+ V++ L++G + G+ +D + ++ G +
Sbjct: 128 NKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKAC 187
Query: 352 SSLISGLFKEGKFEHAMQLWKEMMEKG-CEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
++L+ GL K + A ++ E ++ + +TVVY+ALI G C+ G+ ++A M
Sbjct: 188 AALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMS 247
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCK---NG 467
G P+ TY+ L+ +++ +A V EM + + Y+ L+ C+
Sbjct: 248 KIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPD 307
Query: 468 KLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVAT 527
K M+ K+M RG DVV+YS++I FC A + +LF +M ++ + +V T
Sbjct: 308 KCYNFMV--KEMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEM--RQKGMVMNVVT 362
Query: 528 YNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDEL 587
Y L+ AF ++ N S A +L+ M + G PD IF T+ D+
Sbjct: 363 YTSLIKAFLREGNSSVAKKLLDQMTELGLSPD----RIFYTTILDH-------------- 404
Query: 588 VVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
L K A + M++ + P+A ++ ++ LC+ + +AI
Sbjct: 405 ---LCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAI 450
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 173/365 (47%), Gaps = 2/365 (0%)
Query: 137 VKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVE-V 195
V S+ ++N + + G A+E ++ + +S + P+ ++ LC VD A E V
Sbjct: 149 VVSYTILINGLFRAGKVTDAVEIWNAMIRS-GVSPDNKACAALVVGLCHARKVDLAYEMV 207
Query: 196 FRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCK 255
I + Y+ L+ G CK GRI++A +L M G P+ +NVL++
Sbjct: 208 AEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYD 267
Query: 256 KGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVT 315
L RA ++ M G + +YN L+ CR +K + + + + + + V+
Sbjct: 268 NNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVS 327
Query: 316 FGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM 375
+ TL+ F + + + ++G N Y+SLI +EG A +L +M
Sbjct: 328 YSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMT 387
Query: 376 EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCH 435
E G P+ + Y+ ++D LC+ G D+A +M P++ +Y+SL+ G +G
Sbjct: 388 ELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVT 447
Query: 436 KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
+AI ++++MK C +E+ + +I GL + KL A VW QM+ +G LD ++I
Sbjct: 448 EAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507
Query: 496 HGFCN 500
C+
Sbjct: 508 KASCS 512
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 201/426 (47%), Gaps = 3/426 (0%)
Query: 131 FHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVD 190
F K ++ F V G + R+L + ++ + + +PN + ++I L + GL+D
Sbjct: 99 FKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLD 158
Query: 191 QAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLI 250
+ +EVF + + + ++Y+ L++ + GR + ++ LLD M+ E P+ +N +I
Sbjct: 159 KCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVI 218
Query: 251 SALCKKG-DLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC 309
+A + G D L M +G P+ VTYNTL+ +G ++A + M
Sbjct: 219 NACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGI 278
Query: 310 VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
VP+ T+ LV F K R +L + G + Y+ L+ K G + AM
Sbjct: 279 VPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMG 338
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF 429
++ +M GC PN YS L++ + G+ D+ R+ +EMK+ P++ TY+ L+ F
Sbjct: 339 VFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFG 398
Query: 430 EAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVV 489
E G + + ++ +M + + Y +I K G +A + + M + I
Sbjct: 399 EGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSK 458
Query: 490 AYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLN 549
AY+ +I F A L ++ + FN M E P + T++ LL +F + + + +L+
Sbjct: 459 AYTGVIEAFGQAALYEEALVAFNTM--HEVGSNPSIETFHSLLYSFARGGLVKESEAILS 516
Query: 550 IMLDQG 555
++D G
Sbjct: 517 RLVDSG 522
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 203/457 (44%), Gaps = 6/457 (1%)
Query: 96 RRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHR 155
R VF ++ + AYG+ E ++ L RM+ E ++ ++N+V+N + G
Sbjct: 174 RSVF---SYTALINAYGRNGRYETSLELLDRMKNE-KISPSILTYNTVINACARGGLDWE 229
Query: 156 ALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLM 215
L + IQP+ +T+N ++ A GL D+A VFR ++ PD TYS L+
Sbjct: 230 GLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV 289
Query: 216 DGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCV 275
+ K R+++ LL EM G+ P+ +NVL+ A K G + A + M GC
Sbjct: 290 ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCT 349
Query: 276 PNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASV 335
PN TY+ L++ + G+ + L +M ++ P+ T+ L+ F + G + ++
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL 409
Query: 336 LISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCR 395
+ E + Y +I K G E A ++ + M P++ Y+ +I+ +
Sbjct: 410 FHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQ 469
Query: 396 EGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVC 455
+EA M G P+ T+ SL+ F G ++ + + ++ N
Sbjct: 470 AALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDT 529
Query: 456 YSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
++ I + GK EA+ + M D +++ + A+LVD+ + F +M
Sbjct: 530 FNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEM- 588
Query: 516 CQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIML 552
+ +++ P + Y ++L + + ++L ML
Sbjct: 589 -KASDILPSIMCYCMMLAVYGKTERWDDVNELLEEML 624
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 151/319 (47%), Gaps = 4/319 (1%)
Query: 246 FNVLISALCKKGDLIRAAKLVDNMSLK-GCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM 304
F ++ +GD R+ +L M + C PNE Y ++ L R+G L+K + + ++M
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 305 VANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEG-K 363
+ + ++ L++ + + GR +L ++ + Y+++I+ + G
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD 227
Query: 364 FEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSS 423
+E + L+ EM +G +P+ V Y+ L+ G DEA M + G +P+ TYS
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 424 LMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRG 483
L+ F + K + EM + + Y++L+ K+G + EAM V+ QM + G
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 484 IKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISR 543
+ YS +++ F + D +LF +M + + PD ATYNIL+ F +
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEM--KSSNTDPDAATYNILIEVFGEGGYFKE 405
Query: 544 AMDVLNIMLDQGCDPDFIT 562
+ + + M+++ +PD T
Sbjct: 406 VVTLFHDMVEENIEPDMET 424
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 116/224 (51%), Gaps = 3/224 (1%)
Query: 345 RGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE 404
+ NE+IY+ +IS L +EG + ++++ EM +G + Y+ALI+ R G+ + + E
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 405 YLIEMKNKGHLPNSFTYSSLMRGFFEAG-DCHKAILVWKEMKNNSCNHNEVCYSILINGL 463
L MKN+ P+ TY++++ G D + ++ EM++ + V Y+ L++
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 464 CKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQP 523
G EA MV++ M GI D+ YS ++ F + +++ L +M + P
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGS--LP 315
Query: 524 DVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
D+ +YN+LL A+ + +I AM V + M GC P+ T + L
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 180/452 (39%), Gaps = 78/452 (17%)
Query: 66 DLSFYS-LIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLF 124
DL+ YS L+E + +LL +M + ++ V+ +AY K+ ++A+ +F
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVF 340
Query: 125 HRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALC 184
H+M+A C +++ +LN+ Q G + + + + KS N P+ T+N++I+
Sbjct: 341 HQMQAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM-KSSNTDPDAATYNILIEVFG 398
Query: 185 KVGLVDQAVEVFRGIHLRNCAPDSYTYSTLM-----DGLCKEGR---------------- 223
+ G + V +F + N PD TY ++ GL ++ R
Sbjct: 399 EGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSK 458
Query: 224 --------------IDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNM 269
+EA+ + M G+ P+ F+ L+ + + G + + ++ +
Sbjct: 459 AYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRL 518
Query: 270 SLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVT---------FGTLV 320
G N T+N ++ + GK +AV M ++C P++ T F LV
Sbjct: 519 VDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLV 578
Query: 321 HGFVKQGRASDGASVLISL------------EERGHRGNEYIYSSL---------ISGLF 359
+Q + +L S+ ER NE + L + G
Sbjct: 579 DECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQM 638
Query: 360 KEGKFEHA--MQLWKEMMEK----GCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKG 413
+G ++ Q+ + +++K GC Y+AL+D L G+ + A L E +G
Sbjct: 639 IKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRG 698
Query: 414 HLPNSFTYSSLMRGF----FEAGDCHKAILVW 441
P F + L+ G + A+ VW
Sbjct: 699 LFPELFRKNKLVWSVDVHRMSEGGMYTALSVW 730
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 43/219 (19%)
Query: 358 LFKE----GKFEHAMQLWKEMMEK-GCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK 412
+FKE G ++ +++L+K M + C+PN +Y+ +I L REG D
Sbjct: 111 VFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLD------------ 158
Query: 413 GHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEA 472
K + V+ EM + + + Y+ LIN +NG+ +
Sbjct: 159 -----------------------KCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETS 195
Query: 473 MMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGM-KLFNQMLCQEAELQPDVATYNIL 531
+ + +M + I ++ Y+++I+ L +G+ LF +M + +QPD+ TYN L
Sbjct: 196 LELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEM--RHEGIQPDIVTYNTL 253
Query: 532 LNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
L+A + A V M D G PD T ++T
Sbjct: 254 LSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETF 292
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 191/374 (51%), Gaps = 10/374 (2%)
Query: 115 HFPEKAVNLFHRMEAEFHCKQTV---KSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQP 171
H P KA+ FH ++ H ++ V SF+ ++ I H H + H +SL I P
Sbjct: 69 HGP-KALQFFHFLDN--HHREYVHDASSFDLAID-IAARLHLHPTVWSLIHRMRSLRIGP 124
Query: 172 NGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLL 231
+ TF +V + G D+AV++F +H C D +++T++D LCK R+++A L
Sbjct: 125 SPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF 184
Query: 232 DEMQIEGTFP-NPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCR 290
++ G F + +NV+++ C +A +++ M +G PN TYNT++ G R
Sbjct: 185 RALR--GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 242
Query: 291 KGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYI 350
G++ A +M C + VT+ T+VHGF G +V + G +
Sbjct: 243 AGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVAT 302
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
Y+++I L K+ E+A+ +++EM+ +G EPN Y+ LI GL G+ E + M+
Sbjct: 303 YNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRME 362
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
N+G PN TY+ ++R + E + KA+ ++++M + C N Y+ILI+G+ +
Sbjct: 363 NEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSE 422
Query: 471 EAMMVWKQMLSRGI 484
+ ++ Q ++ I
Sbjct: 423 DMVVAGNQAFAKEI 436
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 162/337 (48%), Gaps = 4/337 (1%)
Query: 66 DLSFYSLIEKLAASSDF-ASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLF 124
D S + L +AA ++ L+ +M+ R K F ++ + Y A P+KAV LF
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 125 HRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALC 184
M E C Q + SFN++L+V+ + +A E + + ++ + +T+N+++ C
Sbjct: 150 LNMH-EHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV--DTVTYNVILNGWC 206
Query: 185 KVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPF 244
+ +A+EV + + R P+ TY+T++ G + G+I A EM+ +
Sbjct: 207 LIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVV 266
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM 304
+ ++ G++ RA + D M +G +P+ TYN ++ LC+K + AV + +M
Sbjct: 267 TYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEM 326
Query: 305 VANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKF 364
V PN T+ L+ G G S G ++ +E G N Y+ +I + +
Sbjct: 327 VRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEV 386
Query: 365 EHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADE 401
E A+ L+++M C PN Y+ LI G+ ++++
Sbjct: 387 EKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 183/380 (48%), Gaps = 6/380 (1%)
Query: 141 NSVLNVIIQEGHFHRALEFYSHVCKSLNIQ--PNGLTFNLVIKALCKVGLVDQAVEVFRG 198
NSVL + G +AL+F+ H + + + + +F+L I ++ L +
Sbjct: 60 NSVLKRLWNHGP--KALQFF-HFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHR 116
Query: 199 IHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGD 258
+ P T++ + + G+ D+AV L M G F + FN ++ LCK
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 259 LIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
+ +A +L + + V + VTYN +++G C + KA+ +L +MV PN T+ T
Sbjct: 177 VEKAYELFRALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 235
Query: 319 LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG 378
++ GF + G+ + +++R + Y++++ G G+ + A ++ EM+ +G
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Query: 379 CEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAI 438
P+ Y+A+I LC++ + A EM +G+ PN TY+ L+RG F AG+ +
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE 355
Query: 439 LVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGF 498
+ + M+N C N Y+++I + ++ +A+ ++++M S ++ Y+ +I G
Sbjct: 356 ELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Query: 499 CNAQLVDQGMKLFNQMLCQE 518
+ + + NQ +E
Sbjct: 416 FVRKRSEDMVVAGNQAFAKE 435
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 143/270 (52%), Gaps = 3/270 (1%)
Query: 299 SLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGL 358
SL+++M + + P+ TF + + G+ + +++ E G + +++++ L
Sbjct: 112 SLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 171
Query: 359 FKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNS 418
K + E A +L++ + + +TV Y+ +++G C + +A E L EM +G PN
Sbjct: 172 CKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNL 230
Query: 419 FTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQ 478
TY+++++GFF AG A + EMK C + V Y+ +++G G++ A V+ +
Sbjct: 231 TTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE 290
Query: 479 MLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQ 538
M+ G+ V Y++MI C V+ + +F +M+ + E P+V TYN+L+ +
Sbjct: 291 MIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYE--PNVTTYNVLIRGLFHA 348
Query: 539 NNISRAMDVLNIMLDQGCDPDFITCDIFLK 568
SR +++ M ++GC+P+F T ++ ++
Sbjct: 349 GEFSRGEELMQRMENEGCEPNFQTYNMMIR 378
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 178/393 (45%), Gaps = 42/393 (10%)
Query: 177 NLVIKALCKVGLVDQAVEVFRGI--HLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEM 234
N V+K L G +A++ F + H R D+ ++ +D + SL+ M
Sbjct: 60 NSVLKRLWNHG--PKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRM 117
Query: 235 QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKL 294
+ P+P F ++ G +A KL NM GC + ++NT++D LC+ ++
Sbjct: 118 RSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRV 177
Query: 295 NKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSL 354
KA L + V + VT+ +++G+ R
Sbjct: 178 EKAYELFRALRGRFSV-DTVTYNVILNGWCLIKRTPK----------------------- 213
Query: 355 ISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGH 414
A+++ KEM+E+G PN Y+ ++ G R G+ A E+ +EMK +
Sbjct: 214 ------------ALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC 261
Query: 415 LPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMM 474
+ TY++++ GF AG+ +A V+ EM + Y+ +I LCK + A++
Sbjct: 262 EIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVV 321
Query: 475 VWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNA 534
++++M+ RG + +V Y+ +I G +A +G +L +M + E P+ TYN+++
Sbjct: 322 MFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCE--PNFQTYNMMIRY 379
Query: 535 FYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
+ + + + +A+ + M C P+ T +I +
Sbjct: 380 YSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 116/209 (55%), Gaps = 3/209 (1%)
Query: 362 GKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTY 421
GK + A++L+ M E GC + ++ ++D LC+ + ++A E ++ + + ++ TY
Sbjct: 140 GKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV-DTVTY 198
Query: 422 SSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLS 481
+ ++ G+ KA+ V KEM N N Y+ ++ G + G++ A + +M
Sbjct: 199 NVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKK 258
Query: 482 RGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNI 541
R ++DVV Y++++HGF A + + +F++M+ +E L P VATYN ++ +++N+
Sbjct: 259 RDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI-REGVL-PSVATYNAMIQVLCKKDNV 316
Query: 542 SRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
A+ + M+ +G +P+ T ++ ++ L
Sbjct: 317 ENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/480 (23%), Positives = 219/480 (45%), Gaps = 12/480 (2%)
Query: 102 KNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYS 161
+ + + A+G+A A+NL M + ++N+++N G++ ALE
Sbjct: 179 ETYDALINAHGRAGQWRWAMNLMDDM-LRAAIAPSRSTYNNLINACGSSGNWREALE--- 234
Query: 162 HVCKSLN---IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGL 218
VCK + + P+ +T N+V+ A +A+ F + PD+ T++ ++ L
Sbjct: 235 -VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCL 293
Query: 219 CKEGRIDEAVSLLDEMQIEGT--FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVP 276
K G+ +A+ L + M+ + P+ F ++ KG++ + + M +G P
Sbjct: 294 SKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 353
Query: 277 NEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVL 336
N V+YN L+ G A+S+L + N +P+ V++ L++ + + + V
Sbjct: 354 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Query: 337 ISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCRE 396
+ + + + N Y++LI G A++++++M + G +PN V L+ R
Sbjct: 414 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 473
Query: 397 GKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCY 456
K L +++G N+ Y+S + + A + KAI +++ M+ + V +
Sbjct: 474 KKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTF 533
Query: 457 SILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLC 516
+ILI+G C+ K EA+ K+M I L YSS++ + V + +FNQM
Sbjct: 534 TILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM-- 591
Query: 517 QEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNP 576
+ A +PDV Y +L+A+ +A ++ M G +PD I C ++ P
Sbjct: 592 KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQP 651
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 116/493 (23%), Positives = 217/493 (44%), Gaps = 78/493 (15%)
Query: 146 VIIQEGHFHRALEFYSHVCKSLNIQPN----GLTFNLVIKALCKVGLVDQAVEVFRGIHL 201
V+I+E +E +V K + IQ N +N++I+ + VDQA +F +
Sbjct: 112 VLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQK 171
Query: 202 RNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIR 261
+C PD+ TY L++ + G+ A++L+D+M P+ +N LI+A G+
Sbjct: 172 WSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRE 231
Query: 262 AAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVH 321
A ++ M+ G P+ VT+N ++ + +KA+S M K P+ TF +++
Sbjct: 232 ALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIY 291
Query: 322 GFVKQGRASDGASVLISLEERGH--RGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGC 379
K G++S + S+ E+ R + ++S++ +G+ E+ +++ M+ +G
Sbjct: 292 CLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGL 351
Query: 380 EPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAIL 439
+PN V Y+AL+ G + A L ++K G +P+ +Y+ L+ + + KA
Sbjct: 352 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 411
Query: 440 VWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM-------------------- 479
V+ M+ N V Y+ LI+ NG L EA+ +++QM
Sbjct: 412 VFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS 471
Query: 480 ---------------LSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPD 524
SRGI L+ AY+S I + NA +++ + L+ M ++ +++ D
Sbjct: 472 RSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM--RKKKVKAD 529
Query: 525 VATYNILLN-----------------------------------AFYQQNNISRAMDVLN 549
T+ IL++ A+ +Q ++ A + N
Sbjct: 530 SVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFN 589
Query: 550 IMLDQGCDPDFIT 562
M GC+PD I
Sbjct: 590 QMKMAGCEPDVIA 602
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 209/467 (44%), Gaps = 47/467 (10%)
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRG 198
+ N VL+ + +AL ++ + K ++P+ TFN++I L K+G QA+++F
Sbjct: 250 THNIVLSAYKSGRQYSKALSYF-ELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNS 308
Query: 199 IHLRN--CAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
+ + C PD T++++M +G I+ ++ + M EG PN +N L+ A
Sbjct: 309 MREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 368
Query: 257 GDLIRAAKLVDNMSLKGCVP-----------------------------------NEVTY 281
G A ++ ++ G +P N VTY
Sbjct: 369 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 428
Query: 282 NTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEE 341
N L+D G L +AV + QM + PN V+ TL+ + + + +VL + +
Sbjct: 429 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 488
Query: 342 RGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADE 401
RG N Y+S I + E A+ L++ M +K + ++V ++ LI G CR K E
Sbjct: 489 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 548
Query: 402 AREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILIN 461
A YL EM++ YSS++ + + G +A ++ +MK C + + Y+ +++
Sbjct: 549 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH 608
Query: 462 GLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM-LCQEAE 520
+ K +A ++ +M + GI+ D +A S+++ F Q +F M L +E E
Sbjct: 609 AYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKG---GQPSNVFVLMDLMREKE 665
Query: 521 LQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
+ A + + +A RA+D++ +M DP + I L
Sbjct: 666 IPFTGAVFFEIFSACNTLQEWKRAIDLIQMM-----DPYLPSLSIGL 707
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 160/394 (40%), Gaps = 37/394 (9%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
+S+ L+ S +E+ M++ERR + + AYG F +AV +F +
Sbjct: 391 VSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQ 450
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
ME + K V S ++L ++ +S I N +N I +
Sbjct: 451 MEQD-GIKPNVVSVCTLL-AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINA 508
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
+++A+ +++ + + DS T++ L+ G C+ + EA+S L EM+ V+
Sbjct: 509 AELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVY 568
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA 306
+ ++ A K+G + A + + M + GC P+ + Y +++ K KA L +M A
Sbjct: 569 SSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEA 628
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG--------- 357
N P+ + L+ F K G+ S+ ++ + E+ ++ + S
Sbjct: 629 NGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKR 688
Query: 358 -------------------------LF-KEGKFEHAMQLWKEMMEKGCEPNTVVYSALID 391
LF K GK E M+L+ +++ G N Y+ L++
Sbjct: 689 AIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLE 748
Query: 392 GLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
L G + E L M G P++ Y ++
Sbjct: 749 HLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDII 782
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 140/313 (44%), Gaps = 17/313 (5%)
Query: 281 YNTLVDGLCRKGKLNKAVSLLNQM--VANKCVPNDVTFGTLV-----HGFVKQGRASDGA 333
+ L+ L R+G + V++ M N C ND+ + ++ H +V Q R
Sbjct: 110 FPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDI-YNMMIRLHARHNWVDQARG---- 164
Query: 334 SVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGL 393
+ +++ + + Y +LI+ + G++ AM L +M+ P+ Y+ LI+
Sbjct: 165 -LFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINAC 223
Query: 394 CREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNE 453
G EA E +M + G P+ T++ ++ + KA+ ++ MK +
Sbjct: 224 GSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDT 283
Query: 454 VCYSILINGLCKNGKLMEAMMVWKQMLSRGI--KLDVVAYSSMIHGFCNAQLVDQGMKLF 511
++I+I L K G+ +A+ ++ M + + DVV ++S++H + ++ +F
Sbjct: 284 TTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF 343
Query: 512 NQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLR 571
M+ + L+P++ +YN L+ A+ A+ VL + G PD ++ L +
Sbjct: 344 EAMVAEG--LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 401
Query: 572 DNMNPPQDGREFL 584
+ P + FL
Sbjct: 402 RSRQPGKAKEVFL 414
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 24/191 (12%)
Query: 438 ILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHG 497
+ W +++ N C N++ Y+++I ++ + +A ++ +M K D Y ++I+
Sbjct: 129 VFKWMKIQKNYCARNDI-YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINA 187
Query: 498 FCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCD 557
A M L + ML A + P +TYN L+NA N A++V M D G
Sbjct: 188 HGRAGQWRWAMNLMDDML--RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVG 245
Query: 558 PDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEAS 617
PD +T +I L + GR++ L E+M + P+ +
Sbjct: 246 PDLVTHNIVLSAYK-------SGRQYSKAL--------------SYFELMKGAKVRPDTT 284
Query: 618 TWAIVVQQLCK 628
T+ I++ L K
Sbjct: 285 TFNIIIYCLSK 295
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/480 (23%), Positives = 219/480 (45%), Gaps = 12/480 (2%)
Query: 102 KNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYS 161
+ + + A+G+A A+NL M + ++N+++N G++ ALE
Sbjct: 47 ETYDALINAHGRAGQWRWAMNLMDDM-LRAAIAPSRSTYNNLINACGSSGNWREALE--- 102
Query: 162 HVCKSLN---IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGL 218
VCK + + P+ +T N+V+ A +A+ F + PD+ T++ ++ L
Sbjct: 103 -VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCL 161
Query: 219 CKEGRIDEAVSLLDEMQIEGT--FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVP 276
K G+ +A+ L + M+ + P+ F ++ KG++ + + M +G P
Sbjct: 162 SKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 221
Query: 277 NEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVL 336
N V+YN L+ G A+S+L + N +P+ V++ L++ + + + V
Sbjct: 222 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 281
Query: 337 ISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCRE 396
+ + + + N Y++LI G A++++++M + G +PN V L+ R
Sbjct: 282 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 341
Query: 397 GKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCY 456
K L +++G N+ Y+S + + A + KAI +++ M+ + V +
Sbjct: 342 KKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTF 401
Query: 457 SILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLC 516
+ILI+G C+ K EA+ K+M I L YSS++ + V + +FNQM
Sbjct: 402 TILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM-- 459
Query: 517 QEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNP 576
+ A +PDV Y +L+A+ +A ++ M G +PD I C ++ P
Sbjct: 460 KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQP 519
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/490 (22%), Positives = 212/490 (43%), Gaps = 91/490 (18%)
Query: 176 FNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQ 235
+N++I+ + VDQA +F + +C PD+ TY L++ + G+ A++L+D+M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 236 IEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLN 295
P+ +N LI+A G+ A ++ M+ G P+ VT+N ++ + +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 296 KAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGH--RGNEYIYSS 353
KA+S M K P+ TF +++ K G++S + S+ E+ R + ++S
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 354 LISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKG 413
++ +G+ E+ +++ M+ +G +PN V Y+AL+ G + A L ++K G
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 414 HLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAM 473
+P+ +Y+ L+ + + KA V+ M+ N V Y+ LI+ NG L EA+
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 313
Query: 474 MVWKQM-----------------------------------LSRGIKLDVVAYSSMIHGF 498
+++QM SRGI L+ AY+S I +
Sbjct: 314 EIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 373
Query: 499 CNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLN------------------------- 533
NA +++ + L+ M ++ +++ D T+ IL++
Sbjct: 374 INAAELEKAIALYQSM--RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPL 431
Query: 534 ----------AFYQQNNISRAMDVLNIMLDQGCDPDFI-----------------TCDIF 566
A+ +Q ++ A + N M GC+PD I C++F
Sbjct: 432 TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELF 491
Query: 567 LKTLRDNMNP 576
L+ + + P
Sbjct: 492 LEMEANGIEP 501
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 209/467 (44%), Gaps = 47/467 (10%)
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRG 198
+ N VL+ + +AL ++ + K ++P+ TFN++I L K+G QA+++F
Sbjct: 118 THNIVLSAYKSGRQYSKALSYF-ELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNS 176
Query: 199 IHLRN--CAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
+ + C PD T++++M +G I+ ++ + M EG PN +N L+ A
Sbjct: 177 MREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 236
Query: 257 GDLIRAAKLVDNMSLKGCVP-----------------------------------NEVTY 281
G A ++ ++ G +P N VTY
Sbjct: 237 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 296
Query: 282 NTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEE 341
N L+D G L +AV + QM + PN V+ TL+ + + + +VL + +
Sbjct: 297 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 356
Query: 342 RGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADE 401
RG N Y+S I + E A+ L++ M +K + ++V ++ LI G CR K E
Sbjct: 357 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 416
Query: 402 AREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILIN 461
A YL EM++ YSS++ + + G +A ++ +MK C + + Y+ +++
Sbjct: 417 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH 476
Query: 462 GLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM-LCQEAE 520
+ K +A ++ +M + GI+ D +A S+++ F Q +F M L +E E
Sbjct: 477 AYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKG---GQPSNVFVLMDLMREKE 533
Query: 521 LQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
+ A + + +A RA+D++ +M DP + I L
Sbjct: 534 IPFTGAVFFEIFSACNTLQEWKRAIDLIQMM-----DPYLPSLSIGL 575
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 152/321 (47%), Gaps = 6/321 (1%)
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM 304
++N++I + + +A L M C P+ TY+ L++ R G+ A++L++ M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 305 VANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGK- 363
+ P+ T+ L++ G + V + + G G + + +++ +K G+
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNG-VGPDLVTHNIVLSAYKSGRQ 131
Query: 364 FEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGH--LPNSFTY 421
+ A+ ++ M P+T ++ +I L + G++ +A + M+ K P+ T+
Sbjct: 132 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 191
Query: 422 SSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLS 481
+S+M + G+ V++ M N V Y+ L+ +G A+ V +
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 251
Query: 482 RGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNI 541
GI DVV+Y+ +++ + ++ + ++F ++ ++ +P+V TYN L++A+ +
Sbjct: 252 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVF--LMMRKERRKPNVVTYNALIDAYGSNGFL 309
Query: 542 SRAMDVLNIMLDQGCDPDFIT 562
+ A+++ M G P+ ++
Sbjct: 310 AEAVEIFRQMEQDGIKPNVVS 330
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 160/394 (40%), Gaps = 37/394 (9%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
+S+ L+ S +E+ M++ERR + + AYG F +AV +F +
Sbjct: 259 VSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQ 318
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
ME + K V S ++L ++ +S I N +N I +
Sbjct: 319 MEQD-GIKPNVVSVCTLL-AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINA 376
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
+++A+ +++ + + DS T++ L+ G C+ + EA+S L EM+ V+
Sbjct: 377 AELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVY 436
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA 306
+ ++ A K+G + A + + M + GC P+ + Y +++ K KA L +M A
Sbjct: 437 SSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEA 496
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG--------- 357
N P+ + L+ F K G+ S+ ++ + E+ ++ + S
Sbjct: 497 NGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKR 556
Query: 358 -------------------------LF-KEGKFEHAMQLWKEMMEKGCEPNTVVYSALID 391
LF K GK E M+L+ +++ G N Y+ L++
Sbjct: 557 AIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLE 616
Query: 392 GLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
L G + E L M G P++ Y ++
Sbjct: 617 HLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDII 650
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 128/285 (44%), Gaps = 15/285 (5%)
Query: 307 NKCVPNDVTFGTLV-----HGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKE 361
N C ND+ + ++ H +V Q R + +++ + + Y +LI+ +
Sbjct: 6 NYCARNDI-YNMMIRLHARHNWVDQARG-----LFFEMQKWSCKPDAETYDALINAHGRA 59
Query: 362 GKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTY 421
G++ AM L +M+ P+ Y+ LI+ G EA E +M + G P+ T+
Sbjct: 60 GQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTH 119
Query: 422 SSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLS 481
+ ++ + KA+ ++ MK + ++I+I L K G+ +A+ ++ M
Sbjct: 120 NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 179
Query: 482 RGI--KLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQN 539
+ + DVV ++S++H + ++ +F M+ + L+P++ +YN L+ A+
Sbjct: 180 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEG--LKPNIVSYNALMGAYAVHG 237
Query: 540 NISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFL 584
A+ VL + G PD ++ L + + P + FL
Sbjct: 238 MSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL 282
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 24/186 (12%)
Query: 443 EMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQ 502
+++ N C N++ Y+++I ++ + +A ++ +M K D Y ++I+ A
Sbjct: 2 KIQKNYCARNDI-YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAG 60
Query: 503 LVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
M L + ML A + P +TYN L+NA N A++V M D G PD +T
Sbjct: 61 QWRWAMNLMDDML--RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVT 118
Query: 563 CDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIV 622
+I L + GR++ L E+M + P+ +T+ I+
Sbjct: 119 HNIVLSAYK-------SGRQYSKAL--------------SYFELMKGAKVRPDTTTFNII 157
Query: 623 VQQLCK 628
+ L K
Sbjct: 158 IYCLSK 163
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 142/546 (26%), Positives = 242/546 (44%), Gaps = 74/546 (13%)
Query: 140 FNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNG-LTFNLVIKALCKVGLVDQAV----E 194
NSVL++ E +A+ F SH+ P+G L F+ V K + +V Q +
Sbjct: 5 LNSVLSMASPESSPRKAVGFVSHI-------PSGFLHFSSVSKGVARVLASTQITLSPKD 57
Query: 195 VFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALC 254
I + PD + S D E + ++ S L+ + G PN L+ LC
Sbjct: 58 SAFTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLC 117
Query: 255 KKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDV 314
K L +A ++++ M G +P+ Y LV+ LC++G + A+ L+ +M + N V
Sbjct: 118 KANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTV 177
Query: 315 TFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEM 374
T+ LV G G + + L ++G N + YS L+ +KE + A++L E+
Sbjct: 178 TYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEI 237
Query: 375 MEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDC 434
+ KG EPN V Y+ L+ G C+EG+ D+A E+ KG N +Y+ L+R G
Sbjct: 238 IVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRW 297
Query: 435 HKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRG---IKLDVVAY 491
+A + EM + V Y+ILIN L +G+ +A+ V K+M S+G ++ +Y
Sbjct: 298 EEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM-SKGNHQFRVTATSY 356
Query: 492 SSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNIL----------LNAFY----- 536
+ +I C VD +K ++M+ + +P+ TYN + AFY
Sbjct: 357 NPVIARLCKEGKVDLVVKCLDEMIYRRC--KPNEGTYNAIGSLCEHNSKVQEAFYIIQSL 414
Query: 537 --------------------QQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL------ 570
++ N A +L M G DPD T ++ L
Sbjct: 415 SNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMF 474
Query: 571 ------------RDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEAST 618
+N P D + +++ L K +RT A ++ E+M+++ +P +T
Sbjct: 475 TGAMEVLSIMEESENCKPTVDN---FNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETT 531
Query: 619 WAIVVQ 624
+AI+V+
Sbjct: 532 YAILVE 537
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 185/419 (44%), Gaps = 74/419 (17%)
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRG 198
++ ++N + + G+ A++ + + N +T+N +++ LC +G ++Q+++
Sbjct: 143 AYTYLVNQLCKRGNVGYAMQLVEKM-EDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVER 201
Query: 199 IHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGD 258
+ + AP+++TYS L++ KE DEAV LLDE+ ++G PN +NVL++ CK+G
Sbjct: 202 LMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGR 261
Query: 259 LIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
A L + KG N V+YN L+ LC G+ +A SLL +M P+ VT+
Sbjct: 262 TDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNI 321
Query: 319 LVHGFVKQGRASDGASVLISLEERGH--RGNEYIYSSLISGLFKEGKFEHAMQLWKEMME 376
L++ GR VL + + H R Y+ +I+ L KEGK + ++ EM+
Sbjct: 322 LINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIY 381
Query: 377 KGCEPNTVVYSAL-----------------------------------IDGLCREGKADE 401
+ C+PN Y+A+ I LCR+G
Sbjct: 382 RRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFA 441
Query: 402 AREYLIEMKNKGHLPNSFTYSSLMRGFF----------------EAGDCHK--------- 436
A + L EM G P++ TYS+L+RG E+ +C
Sbjct: 442 AFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMI 501
Query: 437 -----------AILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGI 484
A+ V++ M NE Y+IL+ G+ +L A V ++ R +
Sbjct: 502 LGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKV 560
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 173/399 (43%), Gaps = 75/399 (18%)
Query: 120 AVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLV 179
A+ L +ME + TV ++N+++ + G +++L+F + + + PN T++ +
Sbjct: 160 AMQLVEKMEDHGYPSNTV-TYNALVRGLCMLGSLNQSLQFVERLMQK-GLAPNAFTYSFL 217
Query: 180 IKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGT 239
++A K D+AV++ I ++ P+ +Y+ L+ G CKEGR D+A++L E+ +G
Sbjct: 218 LEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGF 277
Query: 240 FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGL----------- 288
N +N+L+ LC G A L+ M P+ VTYN L++ L
Sbjct: 278 KANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQ 337
Query: 289 --------------------------CRKGKLNKAVSLLNQMVANKCVPNDVTFGTL--- 319
C++GK++ V L++M+ +C PN+ T+ +
Sbjct: 338 VLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSL 397
Query: 320 ------------------------VHGFVK--------QGRASDGASVLISLEERGHRGN 347
H F K +G +L + G +
Sbjct: 398 CEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPD 457
Query: 348 EYIYSSLISGLFKEGKFEHAMQLWKEMME-KGCEPNTVVYSALIDGLCREGKADEAREYL 406
+ YS+LI GL EG F AM++ M E + C+P ++A+I GLC+ + D A E
Sbjct: 458 AHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVF 517
Query: 407 IEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMK 445
M K +PN TY+ L+ G + A V E++
Sbjct: 518 EMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELR 556
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 157/312 (50%), Gaps = 7/312 (2%)
Query: 103 NFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSH 162
++ V+ + K + A+ LF + A+ K V S+N +L + +G + A +
Sbjct: 248 SYNVLLTGFCKEGRTDDAMALFRELPAKGF-KANVVSYNILLRCLCCDGRWEEANSLLAE 306
Query: 163 VCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRN--CAPDSYTYSTLMDGLCK 220
+ + P+ +T+N++I +L G +QA++V + + N + +Y+ ++ LCK
Sbjct: 307 M-DGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCK 365
Query: 221 EGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAA-KLVDNMSLKGCVPNEV 279
EG++D V LDEM PN +N I +LC+ ++ A ++ ++S K
Sbjct: 366 EGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHD 424
Query: 280 TYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISL 339
Y +++ LCRKG A LL +M P+ T+ L+ G +G + VL +
Sbjct: 425 FYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIM 484
Query: 340 EERGH-RGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGK 398
EE + + ++++I GL K + + AM++++ M+EK PN Y+ L++G+ E +
Sbjct: 485 EESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDE 544
Query: 399 ADEAREYLIEMK 410
+ A+E L E++
Sbjct: 545 LELAKEVLDELR 556
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 107/262 (40%), Gaps = 38/262 (14%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCK-SLNIQPNGLTF 176
E+A +L M+ V ++N ++N + G +AL+ + K + + ++
Sbjct: 298 EEANSLLAEMDGGDRAPSVV-TYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSY 356
Query: 177 NLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYS------------------------ 212
N VI LCK G VD V+ + R C P+ TY+
Sbjct: 357 NPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSN 416
Query: 213 -----------TLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIR 261
+++ LC++G A LL EM G P+ ++ LI LC +G
Sbjct: 417 KQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTG 476
Query: 262 AAKLVDNMS-LKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLV 320
A +++ M + C P +N ++ GLC+ + + A+ + MV K +PN+ T+ LV
Sbjct: 477 AMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILV 536
Query: 321 HGFVKQGRASDGASVLISLEER 342
G + VL L R
Sbjct: 537 EGIAHEDELELAKEVLDELRLR 558
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
Query: 176 FNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQ 235
+ VI +LC+ G A ++ + PD++TYS L+ GLC EG A+ +L M+
Sbjct: 426 YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIME 485
Query: 236 -IEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKL 294
E P FN +I LCK A ++ + M K +PNE TY LV+G+ + +L
Sbjct: 486 ESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDEL 545
Query: 295 NKAVSLLNQMVANKCV 310
A +L+++ K +
Sbjct: 546 ELAKEVLDELRLRKVI 561
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 168/335 (50%), Gaps = 5/335 (1%)
Query: 211 YSTLMDGLCKEGRIDEAVSLLDEMQ--IEGTFPNPFVFNVLISALCKKGDLIRAAKLVDN 268
+ + +D C+ ++D A+ D M+ I+G PN V+N +++ K GD+ +A +
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGK-PNVGVYNTVVNGYVKSGDMDKALRFYQR 218
Query: 269 MSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGR 328
M + P+ T+N L++G CR K + A+ L +M C PN V+F TL+ GF+ G+
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 329 ASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSA 388
+G + + E G R +E L+ GL +EG+ + A L +++ K P+ Y +
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGS 338
Query: 389 LIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNS 448
L++ LC E KA A E + E+ KG P ++L+ G ++G KA ++M N
Sbjct: 339 LVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAG 398
Query: 449 CNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGM 508
+ V +++L+ LC + +A + S+G + D Y ++ GF +G
Sbjct: 399 ILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGE 458
Query: 509 KLFNQMLCQEAELQPDVATYNILLNAFYQQNNISR 543
L N+ML + ++ PD+ TYN L++ SR
Sbjct: 459 VLVNEML--DKDMLPDIFTYNRLMDGLSCTGKFSR 491
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 165/339 (48%)
Query: 131 FHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVD 190
F C + F S ++ + AL + + + ++ +PN +N V+ K G +D
Sbjct: 151 FSCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMD 210
Query: 191 QAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLI 250
+A+ ++ + PD T++ L++G C+ + D A+ L EM+ +G PN FN LI
Sbjct: 211 KALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLI 270
Query: 251 SALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCV 310
G + K+ M GC +E T LVDGLCR+G+++ A L+ ++ + +
Sbjct: 271 RGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVL 330
Query: 311 PNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQL 370
P++ +G+LV + +A ++ L ++G ++L+ GL K G+ E A
Sbjct: 331 PSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGF 390
Query: 371 WKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFE 430
++MM G P++V ++ L+ LC + +A + +KG+ P+ TY L+ GF +
Sbjct: 391 MEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTK 450
Query: 431 AGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKL 469
G + ++ EM + + Y+ L++GL GK
Sbjct: 451 EGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKF 489
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 172/375 (45%), Gaps = 45/375 (12%)
Query: 68 SFYSLIEKLAASSDFASLEELLQQMKR-----ERRVF----IEKNFIVIFKAYGKAHFPE 118
SF + LAA+ F L LL + +F +E F AY +A +
Sbjct: 115 SFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPELEPIFRSAIDAYCRARKMD 174
Query: 119 KAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNL 178
A+ F M+ K V +N+V+N ++ G +AL FY + K +P+ TFN+
Sbjct: 175 YALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKE-RAKPDVCTFNI 233
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLM----------------------- 215
+I C+ D A+++FR + + C P+ +++TL+
Sbjct: 234 LINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELG 293
Query: 216 ------------DGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAA 263
DGLC+EGR+D+A L+ ++ + P+ F + L+ LC + +RA
Sbjct: 294 CRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAM 353
Query: 264 KLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGF 323
++++ + KG P + TLV+GL + G+ KA + +M+ +P+ VTF L+
Sbjct: 354 EMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDL 413
Query: 324 VKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNT 383
++D + + +G+ +E Y L+SG KEG+ + L EM++K P+
Sbjct: 414 CSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDI 473
Query: 384 VVYSALIDGLCREGK 398
Y+ L+DGL GK
Sbjct: 474 FTYNRLMDGLSCTGK 488
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 157/319 (49%), Gaps = 3/319 (0%)
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMS-LKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQ 303
+F I A C+ + A D M L PN YNT+V+G + G ++KA+ +
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQR 218
Query: 304 MVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGK 363
M + P+ TF L++G+ + + + ++E+G N +++LI G GK
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 364 FEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSS 423
E +++ EM+E GC + L+DGLCREG+ D+A ++++ NK LP+ F Y S
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGS 338
Query: 424 LMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRG 483
L+ +A+ + +E+ + + L+ GL K+G+ +A ++M++ G
Sbjct: 339 LVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAG 398
Query: 484 IKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISR 543
I D V ++ ++ C++ +L ++L +PD TY++L++ F ++
Sbjct: 399 ILPDSVTFNLLLRDLCSSDHSTDANRL--RLLASSKGYEPDETTYHVLVSGFTKEGRRKE 456
Query: 544 AMDVLNIMLDQGCDPDFIT 562
++N MLD+ PD T
Sbjct: 457 GEVLVNEMLDKDMLPDIFT 475
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 160/367 (43%), Gaps = 29/367 (7%)
Query: 274 CVPNEVTYNTLVDGLCRKGKLNKAV---SLLNQMVANKCVPNDVTFGTLVHGFVKQGRAS 330
C E + + +D CR K++ A+ + +++ K PN + T+V+G+VK G
Sbjct: 153 CPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGK--PNVGVYNTVVNGYVKSGDMD 210
Query: 331 DGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALI 390
+ + + + ++ LI+G + KF+ A+ L++EM EKGCEPN V ++ LI
Sbjct: 211 KALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLI 270
Query: 391 DGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCN 450
G GK +E + EM G + T L+ G G A + ++ N
Sbjct: 271 RGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVL 330
Query: 451 HNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKL 510
+E Y L+ LC K + AM + +++ +G +A ++++ G + ++
Sbjct: 331 PSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGF 390
Query: 511 FNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
+M+ A + PD T+N+LL ++ + A + + +G +PD T +
Sbjct: 391 MEKMM--NAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHV----- 443
Query: 571 RDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQL-CKP 629
LV K R ++ MLD+ +LP+ T+ ++ L C
Sbjct: 444 ----------------LVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTG 487
Query: 630 RNIRKAI 636
+ RK +
Sbjct: 488 KFSRKQV 494
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 126/297 (42%), Gaps = 37/297 (12%)
Query: 69 FYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRME 128
+ +++ S D Q+M +ER F ++ Y ++ + A++LF M+
Sbjct: 196 YNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMK 255
Query: 129 AEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGL 188
E C+ V SFN+++ + G ++ + + L + + T +++ LC+ G
Sbjct: 256 -EKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIE-LGCRFSEATCEILVDGLCREGR 313
Query: 189 VDQAVEVFRGIHLRNCAPDSYTY-----------------------------------ST 213
VD A + + + P + Y +T
Sbjct: 314 VDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTT 373
Query: 214 LMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKG 273
L++GL K GR ++A +++M G P+ FN+L+ LC A +L S KG
Sbjct: 374 LVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKG 433
Query: 274 CVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRAS 330
P+E TY+ LV G ++G+ + L+N+M+ +P+ T+ L+ G G+ S
Sbjct: 434 YEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFS 490
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 448 SCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGI--KLDVVAYSSMIHGFCNAQLVD 505
SC E + I+ C+ K+ A++ + M R I K +V Y+++++G+ + +D
Sbjct: 152 SCPELEPIFRSAIDAYCRARKMDYALLAFDTM-KRLIDGKPNVGVYNTVVNGYVKSGDMD 210
Query: 506 QGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDI 565
+ ++ + +M + A +PDV T+NIL+N + + + A+D+ M ++GC+P+ ++ +
Sbjct: 211 KALRFYQRMGKERA--KPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNT 268
Query: 566 FLKTLRDNMNPPQDGREFLDE---------------LVVRLVKRQRTIGASKIIEVMLDR 610
++ + ++G + E LV L + R A ++ +L++
Sbjct: 269 LIRGFLSS-GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNK 327
Query: 611 CLLPEASTWAIVVQQLCKPRNIRKA---ISECWSR 642
+LP + +V++LC +A + E W +
Sbjct: 328 RVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKK 362
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 177/348 (50%), Gaps = 2/348 (0%)
Query: 224 IDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNT 283
+ +A+ +LDEM G P+ +VF L+ ALCK G + AAKL ++M ++ V N + +
Sbjct: 199 VKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPV-NLRYFTS 257
Query: 284 LVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERG 343
L+ G CR GK+ +A +L QM P+ V + L+ G+ G+ +D +L + RG
Sbjct: 258 LLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG 317
Query: 344 HRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAR 403
N Y+ LI L K + E AM+++ EM CE + V Y+AL+ G C+ GK D+
Sbjct: 318 FEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCY 377
Query: 404 EYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGL 463
L +M KG +P+ TY +M + + + + ++M+ + + Y+++I
Sbjct: 378 IVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLA 437
Query: 464 CKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQP 523
CK G++ EA+ +W +M G+ V + MI+G + + + F +M+ +
Sbjct: 438 CKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVS 497
Query: 524 DVATYNILLNAFYQQNNISRAMDVLNIMLDQG-CDPDFITCDIFLKTL 570
T +LLN + + A DV + + +G C+ + ++ I++ L
Sbjct: 498 QYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHAL 545
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 132/263 (50%), Gaps = 3/263 (1%)
Query: 169 IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAV 228
+PN + ++I+ALCKV +++A++VF + C D TY+ L+ G CK G+ID+
Sbjct: 318 FEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCY 377
Query: 229 SLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGL 288
+LD+M +G P+ + ++ A KK +L++ M P+ YN ++
Sbjct: 378 IVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLA 437
Query: 289 CRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERG-HRGN 347
C+ G++ +AV L N+M N P TF +++G QG + + + RG +
Sbjct: 438 CKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVS 497
Query: 348 EY-IYSSLISGLFKEGKFEHAMQLWKEMMEKG-CEPNTVVYSALIDGLCREGKADEAREY 405
+Y L++ + K+ K E A +W + KG CE N + ++ I L +G EA Y
Sbjct: 498 QYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSY 557
Query: 406 LIEMKNKGHLPNSFTYSSLMRGF 428
IEM +P T++ LM+G
Sbjct: 558 CIEMIEMDFMPQPDTFAKLMKGL 580
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 125/300 (41%), Gaps = 46/300 (15%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKN---FIVIFKAYGKAHFPEKAVNL 123
+ + +L+ A + A +LL+ M RR E N + V+ +A K E+A+ +
Sbjct: 288 VDYTNLLSGYANAGKMADAYDLLRDM---RRRGFEPNANCYTVLIQALCKVDRMEEAMKV 344
Query: 124 FHRMEAEFHCKQTVKSFNS----------------VLNVIIQEG---------------- 151
F ME + C+ V ++ + VL+ +I++G
Sbjct: 345 FVEME-RYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHE 403
Query: 152 ---HFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDS 208
F LE + + + P+ +N+VI+ CK+G V +AV ++ + +P
Sbjct: 404 KKESFEECLELMEKM-RQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGV 462
Query: 209 YTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTF--PNPFVFNVLISALCKKGDLIRAAKLV 266
T+ +++GL +G + EA EM G F +L++ + K L A +
Sbjct: 463 DTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVW 522
Query: 267 DNMSLKG-CVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVK 325
++ KG C N +++ + L KG +A S +M+ +P TF L+ G K
Sbjct: 523 SCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKK 582
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 184/391 (47%), Gaps = 37/391 (9%)
Query: 165 KSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRI 224
KS N++ + TF ++I+ + GL +AV F + C PD +S ++ L ++ R
Sbjct: 178 KSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRA 237
Query: 225 DEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTL 284
EA S D ++ + P+ V+ L+ C+ G++ A K+ M L G PN TY+ +
Sbjct: 238 SEAQSFFDSLK-DRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIV 296
Query: 285 VDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGH 344
+D LCR G++++A + M+ + C PN +TF L+ VK GR
Sbjct: 297 IDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRT--------------- 341
Query: 345 RGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE 404
E +Q++ +M + GCEP+T+ Y+ LI+ CR+ + A +
Sbjct: 342 --------------------EKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVK 381
Query: 405 YLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLC 464
L M K N+ T++++ R + D + A ++ +M C N V Y+IL+
Sbjct: 382 VLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFV 441
Query: 465 KNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPD 524
+ + + K+M + ++ +V Y ++ FC + KLF +M+ +E L P
Sbjct: 442 GSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMV-EEKCLTPS 500
Query: 525 VATYNILLNAFYQQNNISRAMDVLNIMLDQG 555
++ Y ++L + + + +++ M+ +G
Sbjct: 501 LSLYEMVLAQLRRAGQLKKHEELVEKMIQKG 531
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 188/399 (47%), Gaps = 41/399 (10%)
Query: 88 LLQQMK-RERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNV 146
L+ MK R + IE F ++ + Y +A +AV+ F+RME ++ C +F+ V++
Sbjct: 173 LIDLMKSRNVEISIE-TFTILIRRYVRAGLASEAVHCFNRME-DYGCVPDKIAFSIVISN 230
Query: 147 IIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAP 206
+ ++ A F+ + +P+ + + +++ C+ G + +A +VF+ + L P
Sbjct: 231 LSRKRRASEAQSFFDSLKDRF--EPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEP 288
Query: 207 DSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV 266
+ YTYS ++D LC+ G+I A + +M G PN FN L+ K G + ++
Sbjct: 289 NVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVY 348
Query: 267 DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQ 326
+ M GC P+ +TYN L++ CR L AV +LN M+ KC N TF T+ ++++
Sbjct: 349 NQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFR-YIEK 407
Query: 327 GRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVY 386
R +GA HR ++ +MME CEPNTV Y
Sbjct: 408 KRDVNGA----------HR------------------------MYSKMMEAKCEPNTVTY 433
Query: 387 SALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKN 446
+ L+ D + EM +K PN TY L+ F G + A ++KEM
Sbjct: 434 NILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVE 493
Query: 447 NSCNHNEVC-YSILINGLCKNGKLMEAMMVWKQMLSRGI 484
C + Y +++ L + G+L + + ++M+ +G+
Sbjct: 494 EKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 171/367 (46%), Gaps = 41/367 (11%)
Query: 241 PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSL 300
P+P+ + +S ++ DL A L+D M + + T+ L+ R G ++AV
Sbjct: 151 PHPYNEMIDLSGKVRQFDL--AWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHC 208
Query: 301 LNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFK 360
N+M CVP+ + F ++ ++ RAS+ S SL++R + +Y++L+ G +
Sbjct: 209 FNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCR 267
Query: 361 EGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFT 420
G+ A +++KEM G EPN YS +ID LCR G+ A + +M + G PN+ T
Sbjct: 268 AGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAIT 327
Query: 421 YSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQML 480
+++LMR +AG K + V+ +MK C + + Y+ LI C++ L A+ V M+
Sbjct: 328 FNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMI 387
Query: 481 SRGIKLD-----------------------------------VVAYSSMIHGFCNAQLVD 505
+ +++ V Y+ ++ F ++ D
Sbjct: 388 KKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTD 447
Query: 506 QGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGC-DPDFITCD 564
+K+ +M + E++P+V TY +L+ F + + A + M+++ C P +
Sbjct: 448 MVLKMKKEM--DDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYE 505
Query: 565 IFLKTLR 571
+ L LR
Sbjct: 506 MVLAQLR 512
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 139/275 (50%), Gaps = 26/275 (9%)
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
++ LI + G A+ + M + GC P+ + +S +I L R+ +A EA+ + +K
Sbjct: 189 FTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK 248
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
++ P+ Y++L+RG+ AG+ +A V+KEMK N YSI+I+ LC+ G++
Sbjct: 249 DRFE-PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQIS 307
Query: 471 EAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNI 530
A V+ ML G + + +++++ A ++ ++++NQM ++ +PD TYN
Sbjct: 308 RAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQM--KKLGCEPDTITYNF 365
Query: 531 LLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVR 590
L+ A + N+ A+ VLN M+ + C+ + T + + R
Sbjct: 366 LIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNT----------------------IFR 403
Query: 591 LVKRQRTI-GASKIIEVMLDRCLLPEASTWAIVVQ 624
++++R + GA ++ M++ P T+ I+++
Sbjct: 404 YIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMR 438
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 130/251 (51%), Gaps = 24/251 (9%)
Query: 386 YSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMK 445
Y+ +ID + + D A + MK++ + T++ L+R + AG +A+ + M+
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 446 NNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVD 505
+ C +++ +SI+I+ L + + EA + + R + DV+ Y++++ G+C A +
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS 272
Query: 506 QGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDI 565
+ K+F +M + A ++P+V TY+I+++A + ISRA DV MLD GC P+ IT
Sbjct: 273 EAEKVFKEM--KLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAIT--- 327
Query: 566 FLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQ 625
F +R ++ + GR E V+++ + + +G P+ T+ +++
Sbjct: 328 FNNLMRVHV---KAGRT---EKVLQVYNQMKKLGCE------------PDTITYNFLIEA 369
Query: 626 LCKPRNIRKAI 636
C+ N+ A+
Sbjct: 370 HCRDENLENAV 380
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/543 (22%), Positives = 240/543 (44%), Gaps = 52/543 (9%)
Query: 101 EKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFY 160
E F+V+ ++YGKA +++V +F +M+ + ++T+KS+NS+ VI++ G + A ++
Sbjct: 185 EDMFVVLIESYGKAGIVQESVKIFQKMK-DLGVERTIKSYNSLFKVILRRGRYMMAKRYF 243
Query: 161 SHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCK 220
+ + S ++P T+NL++ ++ A+ F + R +PD T++T+++G C+
Sbjct: 244 NKMV-SEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCR 302
Query: 221 EGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVT 280
++DEA L EM+ P+ + +I + ++ + M G PN T
Sbjct: 303 FKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATT 362
Query: 281 YNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLE 340
Y+TL+ GLC GK+ +A ++L M+A P D + + V Q +A D A+ L+
Sbjct: 363 YSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSI--FLKLLVSQSKAGDMAAATEVLK 420
Query: 341 ---------ERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEK--------GCEPNT 383
E GH Y LI K + A++L ++EK E
Sbjct: 421 AMATLNVPAEAGH------YGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEP 474
Query: 384 VVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKE 443
Y+ +I+ LC G+ +A ++ +G + + ++L+RG + G+ + + K
Sbjct: 475 SAYNPIIEYLCNNGQTAKAEVLFRQLMKRG-VQDQDALNNLIRGHAKEGNPDSSYEILKI 533
Query: 444 MKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQL 503
M Y +LI G+ +A M+ G D + S+I
Sbjct: 534 MSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGR 593
Query: 504 VDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITC 563
V ++ M+ + ++ ++ +L A + ++ A+ ++++ G D
Sbjct: 594 VQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTAD---- 649
Query: 564 DIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVV 623
LD L+ L ++ +TI A K+++ L+R L E S++ V+
Sbjct: 650 --------------------LDSLLSVLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVL 689
Query: 624 QQL 626
L
Sbjct: 690 DAL 692
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 109/492 (22%), Positives = 209/492 (42%), Gaps = 28/492 (5%)
Query: 143 VLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLR 202
V NV+ AL+F+ +S I+ + T +IK L +V ++ A + + +
Sbjct: 120 VYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEK 179
Query: 203 NCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRA 262
D + L++ K G + E+V + +M+ G +N L + ++G + A
Sbjct: 180 GVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMA 239
Query: 263 AKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHG 322
+ + M +G P TYN ++ G +L A+ M P+D TF T+++G
Sbjct: 240 KRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMING 299
Query: 323 FVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPN 382
F + + + + + ++ + Y+++I G + + +++++EM G EPN
Sbjct: 300 FCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPN 359
Query: 383 TVVYSALIDGLCREGKADEAREYLIEMKNKGHLP-NSFTYSSLMRGFFEAGDCHKAILVW 441
YS L+ GLC GK EA+ L M K P ++ + L+ +AGD A V
Sbjct: 360 ATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVL 419
Query: 442 KEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGI--------KLDVVAYSS 493
K M + Y +LI CK A+ + ++ + I +++ AY+
Sbjct: 420 KAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNP 479
Query: 494 MIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLD 553
+I CN + LF Q++ + + D N L+ ++ N + ++L IM
Sbjct: 480 IIEYLCNNGQTAKAEVLFRQLMKRGVQ---DQDALNNLIRGHAKEGNPDSSYEILKIMSR 536
Query: 554 QGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELV---------------VRLVKRQRTI 598
+G + ++ +K+ P D + LD +V L + R
Sbjct: 537 RGVPRESNAYELLIKSYMSK-GEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQ 595
Query: 599 GASKIIEVMLDR 610
AS+++ +M+D+
Sbjct: 596 TASRVMMIMIDK 607
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 128/282 (45%), Gaps = 8/282 (2%)
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
+L ++P+ +N +I+ LC G +A +FR + ++ D + L+ G KEG D
Sbjct: 469 TLEMEPSA--YNPIIEYLCNNGQTAKAEVLFRQL-MKRGVQDQDALNNLIRGHAKEGNPD 525
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
+ +L M G + +LI + KG+ A +D+M G VP+ + +++
Sbjct: 526 SSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVI 585
Query: 286 DGLCRKGKLNKAVSLLNQMV-ANKCVPNDVTF-GTLVHGFVKQGRASDGASVLISLEERG 343
+ L G++ A ++ M+ N + +++ ++ + +G + + L + G
Sbjct: 586 ESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNG 645
Query: 344 HRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAR 403
H + SL+S L ++GK A++L +E+ Y ++D L GK A
Sbjct: 646 HTAD---LDSLLSVLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAY 702
Query: 404 EYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMK 445
L ++ KG + + L++ + G+ +A ++ + +K
Sbjct: 703 SVLCKIMEKGSSTDWKSSDELIKSLNQEGNTKQADVLSRMIK 744
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 202/440 (45%), Gaps = 11/440 (2%)
Query: 136 TVKSFNSVLNVIIQEGHFHRALEFYSHVCKSL----NIQPNGLTFNLVIKALCKVGLVDQ 191
T S++ ++NV +Q ++ + VC+ + + QP+ + FNL+I A + +
Sbjct: 137 THASWDDLINVSVQL-RLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKE 195
Query: 192 AVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPF---VFNV 248
A ++ + P TY+ L+ C G I+ A +L EMQ P V+N
Sbjct: 196 AESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNA 255
Query: 249 LISALCK-KGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVAN 307
I L K KG+ A + M C P TYN +++ + K + L +M ++
Sbjct: 256 YIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSH 315
Query: 308 KCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHA 367
+C PN T+ LV+ F ++G + L+E G + Y+Y++L+ + G A
Sbjct: 316 QCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGA 375
Query: 368 MQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRG 427
+++ M GCEP+ Y+ ++D R G +A EMK G P ++ L+
Sbjct: 376 AEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA 435
Query: 428 FFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLD 487
+ +A D K + KEM N + + ++N + G+ + + +M + D
Sbjct: 436 YSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTAD 495
Query: 488 VVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDV 547
+ Y+ +I+ + A +++ +LF ++ +E +PDV T+ + A+ ++ + ++V
Sbjct: 496 ISTYNILINIYGKAGFLERIEELFVEL--KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEV 553
Query: 548 LNIMLDQGCDPDFITCDIFL 567
M+D GC PD T + L
Sbjct: 554 FEEMIDSGCAPDGGTAKVLL 573
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 185/416 (44%), Gaps = 7/416 (1%)
Query: 140 FNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGI 199
FN +++ Q+ + A Y + +S + P T+ L+IKA C GL+++A V +
Sbjct: 180 FNLLIDAYGQKFQYKEAESLYVQLLESRYV-PTEDTYALLIKAYCMAGLIERAEVVLVEM 238
Query: 200 HLRNCAPDSY---TYSTLMDGLCK-EGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCK 255
+ +P + Y+ ++GL K +G +EA+ + M+ + P +N++I+ K
Sbjct: 239 QNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGK 298
Query: 256 KGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVT 315
+ KL M C PN TY LV+ R+G KA + Q+ + P+
Sbjct: 299 ASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYV 358
Query: 316 FGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM 375
+ L+ + + G A + ++ G + Y+ ++ + G A +++EM
Sbjct: 359 YNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 418
Query: 376 EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCH 435
G P + L+ + + + EM G P++F +S++ + G
Sbjct: 419 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFT 478
Query: 436 KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
K + EM+N C + Y+ILIN K G L ++ ++ + + DVV ++S I
Sbjct: 479 KMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRI 538
Query: 496 HGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIM 551
+ +L + +++F +M+ ++ PD T +LL+A + + + VL M
Sbjct: 539 GAYSRKKLYVKCLEVFEEMI--DSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 592
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/429 (20%), Positives = 198/429 (46%), Gaps = 5/429 (1%)
Query: 61 SYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKA 120
S++ + F LI+ + E L Q+ R V E + ++ KAY A E+A
Sbjct: 172 SFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERA 231
Query: 121 VNLFHRMEAEFHCKQT--VKSFNSVLNVIIQ-EGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+ M+ +T V +N+ + +++ +G+ A++ + + K +P T+N
Sbjct: 232 EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM-KRDRCKPTTETYN 290
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
L+I K + +++ + C P+ TY+ L++ +EG ++A + +++Q +
Sbjct: 291 LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 350
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G P+ +V+N L+ + + G AA++ M GC P+ +YN +VD R G + A
Sbjct: 351 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 410
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
++ +M P + L+ + K + +++ + E G + ++ +S+++
Sbjct: 411 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 470
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
+ G+F ++ EM C + Y+ LI+ + G + E +E+K K P+
Sbjct: 471 YGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPD 530
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
T++S + + K + V++EM ++ C + +L++ C + + +E +
Sbjct: 531 VVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA-CSSEEQVEQVTSVL 589
Query: 478 QMLSRGIKL 486
+ + +G+ +
Sbjct: 590 RTMHKGVTV 598
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 199/420 (47%), Gaps = 5/420 (1%)
Query: 158 EFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDG 217
E + ++ + F ++ ++C+ G + E+ + L + Y ++D
Sbjct: 257 ELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDS 316
Query: 218 LCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPN 277
LC+ R A ++ M+ +G P +N +I LCK G +RA +L++ S P+
Sbjct: 317 LCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPS 376
Query: 278 EVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLI 337
E TY L++ LC++ KA ++L M+ + + + G ++ +VL+
Sbjct: 377 EYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLV 436
Query: 338 SLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMME-KGCEPNTVVYSALIDGLCRE 396
S+ + R +EY +++I+GL K G+ + AM++ +MM K C P+ V + ++ GL +
Sbjct: 437 SMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQ 496
Query: 397 GKADEAREYLIEMKNKGHL-PNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVC 455
G+A+EA + L + + + P Y++++RG F+ +A+ V+ +++ S +
Sbjct: 497 GRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTT 556
Query: 456 YSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
Y+I+I+GLC K+ A W ++ + D Y++ + G C + + +
Sbjct: 557 YAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDL- 615
Query: 516 CQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMN 575
++ P+V YN ++ + A +L M G PD +T I L L D+M+
Sbjct: 616 -ADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRI-LDKLHDSMD 673
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 125/514 (24%), Positives = 219/514 (42%), Gaps = 75/514 (14%)
Query: 180 IKALCKVGL-VDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEA----------- 227
I ++C V D+A+ + G+ LR PDS S+++ LC GR DEA
Sbjct: 61 IHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASG 120
Query: 228 ---------------------VSLLDEMQIEGTFPNPFV-----FNVLISALCKKGDLIR 261
VS L + F FV +N L++ LC +I
Sbjct: 121 FIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVID 180
Query: 262 AAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVH 321
A KLV +M +G +P+ VT+ TL+ G C +L A + ++M PN +T L+
Sbjct: 181 AHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIG 240
Query: 322 GFVKQGRASDGASVLISLEERGHRGNEY-------IYSSLISGLFKEGKFEHAMQLWKEM 374
GF+K G ++ L E + NE +++L+ + +EG F ++ + M
Sbjct: 241 GFLKMRDVETGRKLMKELWE--YMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENM 298
Query: 375 MEKGCEPNTV--VYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAG 432
CE V Y +ID LCR + A + MK+KG P +Y++++ G + G
Sbjct: 299 --SLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDG 356
Query: 433 DCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYS 492
C +A + +E +E Y +L+ LCK +A V + ML + Y+
Sbjct: 357 GCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYN 416
Query: 493 SMIHGFCNAQLVDQGMKLFNQMLCQ-EAELQPDVATYNILLNAFYQQNNISRAMDVL-NI 550
+ G C ++D ++ N ++ + + +PD T N ++N + + AM VL ++
Sbjct: 417 IYLRGLC---VMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDM 473
Query: 551 MLDQGCDPDFIT-----------------CDIFLKTLRDNMNPPQDGREFLDELVVRLVK 593
M + C PD +T D+ + + +N P G + ++ L K
Sbjct: 474 MTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKP--GVVAYNAVIRGLFK 531
Query: 594 RQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLC 627
+ A + + + +++T+AI++ LC
Sbjct: 532 LHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLC 565
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+ A+ + M C + N+V+ ++ +G AL+ + V I+P + +N
Sbjct: 464 DDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYN 523
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
VI+ L K+ D+A+ VF + + DS TY+ ++DGLC ++D A D++
Sbjct: 524 AVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWP 583
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
+ FV+ + LC+ G L A + +++ G +PN V YNT++ R G +A
Sbjct: 584 SGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREA 643
Query: 298 VSLLNQMVANKCVPNDVTFGTL 319
+L +M N P+ VT+ L
Sbjct: 644 YQILEEMRKNGQAPDAVTWRIL 665
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 202/440 (45%), Gaps = 11/440 (2%)
Query: 136 TVKSFNSVLNVIIQEGHFHRALEFYSHVCKSL----NIQPNGLTFNLVIKALCKVGLVDQ 191
T S++ ++NV +Q ++ + VC+ + + QP+ + FNL+I A + +
Sbjct: 115 THASWDDLINVSVQL-RLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKE 173
Query: 192 AVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPF---VFNV 248
A ++ + P TY+ L+ C G I+ A +L EMQ P V+N
Sbjct: 174 AESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNA 233
Query: 249 LISALCK-KGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVAN 307
I L K KG+ A + M C P TYN +++ + K + L +M ++
Sbjct: 234 YIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSH 293
Query: 308 KCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHA 367
+C PN T+ LV+ F ++G + L+E G + Y+Y++L+ + G A
Sbjct: 294 QCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGA 353
Query: 368 MQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRG 427
+++ M GCEP+ Y+ ++D R G +A EMK G P ++ L+
Sbjct: 354 AEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA 413
Query: 428 FFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLD 487
+ +A D K + KEM N + + ++N + G+ + + +M + D
Sbjct: 414 YSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTAD 473
Query: 488 VVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDV 547
+ Y+ +I+ + A +++ +LF ++ +E +PDV T+ + A+ ++ + ++V
Sbjct: 474 ISTYNILINIYGKAGFLERIEELFVEL--KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEV 531
Query: 548 LNIMLDQGCDPDFITCDIFL 567
M+D GC PD T + L
Sbjct: 532 FEEMIDSGCAPDGGTAKVLL 551
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/429 (20%), Positives = 198/429 (46%), Gaps = 5/429 (1%)
Query: 61 SYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKA 120
S++ + F LI+ + E L Q+ R V E + ++ KAY A E+A
Sbjct: 150 SFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERA 209
Query: 121 VNLFHRMEAEFHCKQT--VKSFNSVLNVIIQ-EGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+ M+ +T V +N+ + +++ +G+ A++ + + K +P T+N
Sbjct: 210 EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM-KRDRCKPTTETYN 268
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
L+I K + +++ + C P+ TY+ L++ +EG ++A + +++Q +
Sbjct: 269 LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 328
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G P+ +V+N L+ + + G AA++ M GC P+ +YN +VD R G + A
Sbjct: 329 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 388
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
++ +M P + L+ + K + +++ + E G + ++ +S+++
Sbjct: 389 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 448
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
+ G+F ++ EM C + Y+ LI+ + G + E +E+K K P+
Sbjct: 449 YGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPD 508
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
T++S + + K + V++EM ++ C + +L++ C + + +E +
Sbjct: 509 VVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA-CSSEEQVEQVTSVL 567
Query: 478 QMLSRGIKL 486
+ + +G+ +
Sbjct: 568 RTMHKGVTV 576
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 178/395 (45%), Gaps = 49/395 (12%)
Query: 165 KSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRI 224
+ +NI + + +N+ AL K+G V++A E+ + + R PD Y+TL+DG C +G++
Sbjct: 380 RDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKV 439
Query: 225 DEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTL 284
+A+ L+DEM G P+ +NVL+S L + G ++ + M +G PN VT + +
Sbjct: 440 VDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVI 499
Query: 285 VDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLE---- 340
++GLC K+ +A + + KC N +F V G+ + G + + LE
Sbjct: 500 IEGLCFARKVKEAEDFFSSL-EQKCPENKASF---VKGYCEAGLSKKAYKAFVRLEYPLR 555
Query: 341 -----------------ERGH-----------RGNEYIYSSLISGLFKEGKFEHAMQLWK 372
E+ H + +I K A L+
Sbjct: 556 KSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFD 615
Query: 373 EMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAG 432
M+E+G P+ Y+ +I CR + +A +MK +G P+ TY+ L+ + +
Sbjct: 616 TMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLD 675
Query: 433 DCH-------------KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM 479
H KA V +E + VCY++LI+ CK L +A ++ +M
Sbjct: 676 PEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRM 735
Query: 480 LSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
+ G++ D+VAY+++I + +D + L ++
Sbjct: 736 IDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTEL 770
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/524 (23%), Positives = 228/524 (43%), Gaps = 93/524 (17%)
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG 238
++KA +G+ D+A +V +C D + LM+ + + G+I ++L +++ G
Sbjct: 152 LVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLG 211
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAK-LVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
N + + +++ ALC+KG+L AA L++N S+ G Y T ++GLC G+ KA
Sbjct: 212 LCANEYTYAIVVKALCRKGNLEEAAMLLIENESVFG-------YKTFINGLCVTGETEKA 264
Query: 298 VSLLNQMVANKCVPND---VTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSL 354
V+L+ +++ K + D G +V GF + + SV+I +EE G + Y ++
Sbjct: 265 VALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAV 324
Query: 355 ISGLFKEGKFEHAMQLWKEMMEKGCEPNTVV----------------------------- 385
I K A+ +M+ KG + N V+
Sbjct: 325 IDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNI 384
Query: 386 ------YSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAIL 439
Y+ D L + G+ +EA E L EMK++G +P+ Y++L+ G+ G A+
Sbjct: 385 FLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALD 444
Query: 440 VWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFC 499
+ EM N + + + Y++L++GL +NG E + ++++M + G K + V S +I G C
Sbjct: 445 LIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLC 504
Query: 500 NAQLVDQGMKLFNQM-------------------LCQEA-------ELQPDVATYNILLN 533
A+ V + F+ + L ++A E + Y L
Sbjct: 505 FARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFF 564
Query: 534 AFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVK 593
+ + + +A DVL M +P GR +++ K
Sbjct: 565 SLCIEGYLEKAHDVLKKMSAYRVEP---------------------GRSMCGKMIGAFCK 603
Query: 594 RQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAIS 637
A + + M++R L+P+ T+ I++ C+ ++KA S
Sbjct: 604 LNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAES 647
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 216/498 (43%), Gaps = 18/498 (3%)
Query: 72 LIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEF 131
L+ ++ L L +Q+K+ E + ++ KA + E+A L E+ F
Sbjct: 187 LMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENESVF 246
Query: 132 HCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGL--TFNLVIKALCKVGLV 189
+ + +N + G +A+ + + + L +V++ C +
Sbjct: 247 -------GYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKM 299
Query: 190 DQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVL 249
A V + D Y ++D CK + EA+ LD+M +G N + +++
Sbjct: 300 KAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLI 359
Query: 250 ISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC 309
+ CK + A + + V YN D L + G++ +A LL +M
Sbjct: 360 LQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGI 419
Query: 310 VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
VP+ + + TL+ G+ QG+ D ++ + G + Y+ L+SGL + G E ++
Sbjct: 420 VPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLE 479
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF 429
+++ M +G +PN V S +I+GLC K EA ++ ++ K P + +S ++G+
Sbjct: 480 IYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK--CPEN--KASFVKGYC 535
Query: 430 EAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVV 489
EAG KA +K + Y L LC G L +A V K+M + ++
Sbjct: 536 EAGLSKKA---YKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRS 592
Query: 490 AYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLN 549
MI FC V + LF+ M+ E L PD+ TY I+++ + + N + +A +
Sbjct: 593 MCGKMIGAFCKLNNVREAQVLFDTMV--ERGLIPDLFTYTIMIHTYCRLNELQKAESLFE 650
Query: 550 IMLDQGCDPDFITCDIFL 567
M +G PD +T + L
Sbjct: 651 DMKQRGIKPDVVTYTVLL 668
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 153/373 (41%), Gaps = 45/373 (12%)
Query: 87 ELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNV 146
ELLQ+MK V N+ + Y A++L M + ++N +++
Sbjct: 409 ELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLI-TYNVLVSG 467
Query: 147 IIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAP 206
+ + GH LE Y + K+ +PN +T +++I+ LC V +A + F + + C
Sbjct: 468 LARNGHEEEVLEIYERM-KAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLE-QKCPE 525
Query: 207 DSYT-----------------------------YSTLMDGLCKEGRIDEAVSLLDEMQIE 237
+ + Y L LC EG +++A +L +M
Sbjct: 526 NKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAY 585
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
P + +I A CK ++ A L D M +G +P+ TY ++ CR +L KA
Sbjct: 586 RVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKA 645
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVK-----------QGRASD--GASVLISLEERGH 344
SL M P+ VT+ L+ ++K QG + VL G
Sbjct: 646 ESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGI 705
Query: 345 RGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE 404
+ Y+ LI K E A +L+ M++ G EP+ V Y+ LI R+G D A
Sbjct: 706 GLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVT 765
Query: 405 YLIEMKNKGHLPN 417
+ E+ K ++P+
Sbjct: 766 LVTELSKKYNIPS 778
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 125/272 (45%), Gaps = 18/272 (6%)
Query: 109 KAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLN 168
K Y +A +KA F R+E +K F S + EG+ +A + + +
Sbjct: 532 KGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFS----LCIEGYLEKAHDVLKKM-SAYR 586
Query: 169 IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAV 228
++P +I A CK+ V +A +F + R PD +TY+ ++ C+ + +A
Sbjct: 587 VEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAE 646
Query: 229 SLLDEMQIEGTFPNPFVFNVLISALCK-----------KGDL--IRAAKLVDNMSLKGCV 275
SL ++M+ G P+ + VL+ K +G++ +A++++ S G
Sbjct: 647 SLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIG 706
Query: 276 PNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASV 335
+ V Y L+D C+ L +A L ++M+ + P+ V + TL+ + ++G ++
Sbjct: 707 LDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTL 766
Query: 336 LISLEERGHRGNEYIYSSLISGLFKEGKFEHA 367
+ L ++ + +E +++ S K +F++
Sbjct: 767 VTELSKKYNIPSESFEAAVKSAALKAKRFQYG 798
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 104/232 (44%), Gaps = 22/232 (9%)
Query: 96 RRVFIEKNFIVIFKAY-GKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFH 154
+ V+I+ F + + Y KAH K ++ + C + + +F + NV + F
Sbjct: 556 KSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFD 615
Query: 155 RALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTL 214
+E + P+ T+ ++I C++ + +A +F + R PD TY+ L
Sbjct: 616 TMVE--------RGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVL 667
Query: 215 MDGLCK-----------EGRIDE--AVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIR 261
+D K +G + + A +L E G + + VLI CK +L +
Sbjct: 668 LDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQ 727
Query: 262 AAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPND 313
AA+L D M G P+ V Y TL+ RKG ++ AV+L+ ++ +P++
Sbjct: 728 AAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSE 779
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 121/298 (40%), Gaps = 27/298 (9%)
Query: 295 NKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISL---EERGHRGNEYIY 351
N A+S L Q+ + PN + TLV G SVL+ L EERG + I
Sbjct: 71 NLALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFTVMDLI- 129
Query: 352 SSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKN 411
+I +E K + V AL+ G DEA + L + K
Sbjct: 130 -EVIGEQAEEKKRSFVL--------------IRVSGALVKAYVSLGMFDEATDVLFQSKR 174
Query: 412 KGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLME 471
+ + + LM E G + ++K++K NE Y+I++ LC+ G L E
Sbjct: 175 LDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEE 234
Query: 472 AMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDV-ATYNI 530
A M+ + S V Y + I+G C ++ + L +++ ++ D+ A +
Sbjct: 235 AAMLLIENES------VFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGM 288
Query: 531 LLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELV 588
++ F + + A V+ M + G D C + NMN P+ FLD+++
Sbjct: 289 VVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPE-ALGFLDKML 345
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 188/374 (50%), Gaps = 8/374 (2%)
Query: 123 LFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKS--LNIQPNGLTFNLVI 180
F E + H + +V++++ ++ + + + + + K LN++ TF +V+
Sbjct: 120 FFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVE----TFCIVM 175
Query: 181 KALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTF 240
+ + VD+A+ F + + P+ ++ L+ LCK + +A + + M+ T
Sbjct: 176 RKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFT- 234
Query: 241 PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSL 300
P+ +++L+ K+ +L +A ++ M GC P+ VTY+ +VD LC+ G++++A+ +
Sbjct: 235 PDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGI 294
Query: 301 LNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFK 360
+ M + C P + LVH + + R + + +E G + + +++SLI K
Sbjct: 295 VRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCK 354
Query: 361 EGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFT 420
+ ++ ++ KEM KG PN+ + ++ L G+ DEA + +M K P++ T
Sbjct: 355 ANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADT 413
Query: 421 YSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQML 480
Y+ +++ F E + A VWK M+ + +S+LINGLC+ +A ++ ++M+
Sbjct: 414 YTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMI 473
Query: 481 SRGIKLDVVAYSSM 494
GI+ V + +
Sbjct: 474 EMGIRPSGVTFGRL 487
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 162/322 (50%), Gaps = 4/322 (1%)
Query: 210 TYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNM 269
T+ +M + ++DEA+ + M+ PN FN L+SALCK ++ +A ++ +NM
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229
Query: 270 SLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRA 329
+ P+ TY+ L++G ++ L KA + +M+ C P+ VT+ +V K GR
Sbjct: 230 RDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288
Query: 330 SDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSAL 389
+ ++ S++ + +IYS L+ E + E A+ + EM G + + V+++L
Sbjct: 289 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 348
Query: 390 IDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSC 449
I C+ + L EMK+KG PNS + + ++R E G+ +A V+++M C
Sbjct: 349 IGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VC 407
Query: 450 NHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMK 509
+ Y+++I C+ ++ A VWK M +G+ + +S +I+G C + +
Sbjct: 408 EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACV 467
Query: 510 LFNQMLCQEAELQPDVATYNIL 531
L +M+ E ++P T+ L
Sbjct: 468 LLEEMI--EMGIRPSGVTFGRL 487
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 180/382 (47%), Gaps = 36/382 (9%)
Query: 52 FKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAY 111
F S K Y+ +++ +IE A + + +L+ M++++ + +E F ++ + Y
Sbjct: 120 FFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVE-TFCIVMRKY 178
Query: 112 GKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHV-------C 164
+A ++A+ F+ ME ++ + +FN +L+ + + + +A E + ++
Sbjct: 179 ARAQKVDEAIYAFNVME-KYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDS 237
Query: 165 KSLNI--------------------------QPNGLTFNLVIKALCKVGLVDQAVEVFRG 198
K+ +I P+ +T+++++ LCK G VD+A+ + R
Sbjct: 238 KTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRS 297
Query: 199 IHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGD 258
+ C P ++ YS L+ E R++EAV EM+ G + VFN LI A CK
Sbjct: 298 MDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANR 357
Query: 259 LIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
+ +++ M KG PN + N ++ L +G+ ++A + +M+ C P+ T+
Sbjct: 358 MKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTM 416
Query: 319 LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG 378
++ F ++ V + ++G + + +S LI+GL +E + A L +EM+E G
Sbjct: 417 VIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMG 476
Query: 379 CEPNTVVYSALIDGLCREGKAD 400
P+ V + L L +E + D
Sbjct: 477 IRPSGVTFGRLRQLLIKEERED 498
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 159/356 (44%), Gaps = 26/356 (7%)
Query: 280 TYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISL 339
Y+ +++ + + L+N M K + N TF ++ + + + + +
Sbjct: 136 AYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYAFNVM 194
Query: 340 EERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKA 399
E+ N ++ L+S L K A ++++ M ++ P++ YS L++G +E
Sbjct: 195 EKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFT-PDSKTYSILLEGWGKEPNL 253
Query: 400 DEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSIL 459
+ARE EM + G P+ TYS ++ +AG +A+ + + M + C YS+L
Sbjct: 254 PKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVL 313
Query: 460 INGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEA 519
++ +L EA+ + +M G+K DV ++S+I FC A + ++ +M +
Sbjct: 314 VHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM--KSK 371
Query: 520 ELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQD 579
+ P+ + NI+L ++ A DV M+ + C+PD T + +K
Sbjct: 372 GVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKM---------- 420
Query: 580 GREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKA 635
+++ A K+ + M + + P T+++++ LC+ R +KA
Sbjct: 421 -----------FCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKA 465
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 30/211 (14%)
Query: 428 FFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM--LSRGIK 485
F AG W E K H+ Y ++I K+ + ++W + + +
Sbjct: 110 FRNAGLLTYRFFQWSE-KQRHYEHSVRAYHMMIES---TAKIRQYKLMWDLINAMRKKKM 165
Query: 486 LDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAM 545
L+V + ++ + AQ VD+ + FN M ++ +L P++ +N LL+A + N+ +A
Sbjct: 166 LNVETFCIVMRKYARAQKVDEAIYAFNVM--EKYDLPPNLVAFNGLLSALCKSKNVRKAQ 223
Query: 546 DVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIE 605
+V M D+ PD T I L+ N P+ A ++
Sbjct: 224 EVFENMRDRFT-PDSKTYSILLEGWGKEPNLPK---------------------AREVFR 261
Query: 606 VMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
M+D P+ T++I+V LCK + +A+
Sbjct: 262 EMIDAGCHPDIVTYSIMVDILCKAGRVDEAL 292
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 146/279 (52%), Gaps = 3/279 (1%)
Query: 281 YNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLE 340
YN L+ L R G + + L +M+ + P+ TF TLV+G+ K G + + L
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 341 ERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
+ G + + Y+S I+G + + + A +++KEM + GC N V Y+ LI GL K D
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 401 EAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILI 460
EA L++MK+ PN TY+ L+ +G +A+ ++K+M + ++ Y++LI
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 461 NGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAE 520
C L EA + + ML G+ +V+ Y+++I GFC V + M L ++ML E
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKML--EQN 359
Query: 521 LQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
L PD+ TYN L+ N+ A +L++M + G P+
Sbjct: 360 LVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 141/274 (51%), Gaps = 1/274 (0%)
Query: 211 YSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMS 270
Y+ L+ L + G ++E L EM + P+ + FN L++ CK G ++ A + V +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 271 LKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRAS 330
GC P+ TY + + G CR+ +++ A + +M N C N+V++ L++G + +
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 331 DGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALI 390
+ S+L+ +++ N Y+ LI L G+ AM L+K+M E G +P+ +Y+ LI
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 391 DGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCN 450
C DEA L M G +PN TY++L++GF + + HKA+ + +M +
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKK-NVHKAMGLLSKMLEQNLV 361
Query: 451 HNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGI 484
+ + Y+ LI G C +G L A + M G+
Sbjct: 362 PDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGL 395
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 155/314 (49%), Gaps = 13/314 (4%)
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK 308
L++ LC + K+ M +K C N V V CR + + + ++ K
Sbjct: 66 LVTLLCSQEIPYEVPKITILM-IKSC--NSVRDALFVVDFCRTMRKGDSFEIKYKLTP-K 121
Query: 309 CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAM 368
C + L+ + G + + + E + Y +++L++G K G A
Sbjct: 122 C------YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAK 175
Query: 369 QLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGF 428
Q +++ GC+P+ Y++ I G CR + D A + EM G N +Y+ L+ G
Sbjct: 176 QYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGL 235
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
FEA +A+ + +MK+++C N Y++LI+ LC +G+ EAM ++KQM GIK D
Sbjct: 236 FEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDD 295
Query: 489 VAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL 548
Y+ +I FC+ +D+ L ML E L P+V TYN L+ F ++N + +AM +L
Sbjct: 296 CMYTVLIQSFCSGDTLDEASGLLEHML--ENGLMPNVITYNALIKGFCKKN-VHKAMGLL 352
Query: 549 NIMLDQGCDPDFIT 562
+ ML+Q PD IT
Sbjct: 353 SKMLEQNLVPDLIT 366
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 145/278 (52%), Gaps = 1/278 (0%)
Query: 176 FNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQ 235
+N ++ +L + GLV++ ++ + +PD YT++TL++G CK G + EA + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 236 IEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLN 295
G P+ F + I+ C++ ++ A K+ M+ GC NEV+Y L+ GL K++
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 296 KAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLI 355
+A+SLL +M + C PN T+ L+ G+ S+ ++ + E G + ++ +Y+ LI
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 356 SGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL 415
+ A L + M+E G PN + Y+ALI G C++ +A L +M + +
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLV 361
Query: 416 PNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNE 453
P+ TY++L+ G +G+ A + M+ + N+
Sbjct: 362 PDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQ 399
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 140/286 (48%), Gaps = 3/286 (1%)
Query: 242 NPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLL 301
P +N L+S+L + G + +L M P+ T+NTLV+G C+ G + +A +
Sbjct: 119 TPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYV 178
Query: 302 NQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKE 361
++ C P+ T+ + + G ++ V + + G NE Y+ LI GLF+
Sbjct: 179 TWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEA 238
Query: 362 GKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTY 421
K + A+ L +M + C PN Y+ LID LC G+ EA +M G P+ Y
Sbjct: 239 KKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMY 298
Query: 422 SSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLS 481
+ L++ F +A + + M N N + Y+ LI G CK + +AM + +ML
Sbjct: 299 TVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLE 357
Query: 482 RGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVAT 527
+ + D++ Y+++I G C++ +D +L + M +E+ L P+ T
Sbjct: 358 QNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLM--EESGLVPNQRT 401
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 162/359 (45%), Gaps = 34/359 (9%)
Query: 277 NEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVL 336
N +Y +LV LC + ++ V + ++ C N V V F + R D +
Sbjct: 59 NVTSYASLVTLLCSQ-EIPYEVPKITILMIKSC--NSVRDALFVVDFCRTMRKGDSFEIK 115
Query: 337 ISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCRE 396
L + Y++L+S L + G E +L+ EM+E P+ ++ L++G C+
Sbjct: 116 YKLTPK-------CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKL 168
Query: 397 GKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCY 456
G EA++Y+ + G P+ FTY+S + G + A V+KEM N C+ NEV Y
Sbjct: 169 GYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSY 228
Query: 457 SILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLC 516
+ LI GL + K+ EA+ + +M +V Y+ +I C + + M LF QM
Sbjct: 229 TQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQM-- 286
Query: 517 QEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNP 576
E+ ++PD Y +L+ +F + + A +L ML+ G P+ IT + +K
Sbjct: 287 SESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGF------ 340
Query: 577 PQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKA 635
++ A ++ ML++ L+P+ T+ ++ C N+ A
Sbjct: 341 ----------------CKKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSA 383
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 209/424 (49%), Gaps = 10/424 (2%)
Query: 117 PEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTF 176
P +A +F + AE + ++ S+ ++L + + + S V +S + + + F
Sbjct: 61 PHEAQTVFKTL-AETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQS-GTKLDSIFF 118
Query: 177 NLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQI 236
N VI A + G ++ AV+ + P + TY+TL+ G G+ + + LLD M
Sbjct: 119 NAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLE 178
Query: 237 EGTF---PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGK 293
EG PN FNVL+ A CKK + A ++V M G P+ VTYNT+ +KG+
Sbjct: 179 EGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGE 238
Query: 294 LNKAVS-LLNQMV-ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIY 351
+A S ++ +MV K PN T G +V G+ ++GR DG + ++E N ++
Sbjct: 239 TVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVF 298
Query: 352 SSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKN 411
+SLI+G + + ++ M E + + + YS +++ G ++A + EM
Sbjct: 299 NSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVK 358
Query: 412 KGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLME 471
G P++ YS L +G+ A + KA + + + S N V ++ +I+G C NG + +
Sbjct: 359 AGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDD 417
Query: 472 AMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNIL 531
AM V+ +M G+ ++ + +++ G+ + + ++ M + ++P+ +T+ +L
Sbjct: 418 AMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMM--RGCGVKPENSTFLLL 475
Query: 532 LNAF 535
A+
Sbjct: 476 AEAW 479
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 185/394 (46%), Gaps = 8/394 (2%)
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG 238
++ L + G +A VF+ + P +Y+TL+ + + + S++ E++ G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAV 298
T + FN +I+A + G++ A + + M G P TYNTL+ G GK ++
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 299 SLLNQMVANKCV---PNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLI 355
LL+ M+ V PN TF LV + K+ + + V+ +EE G R + Y+++
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 356 SGLFKEGKFEHAMQ--LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKG 413
+ ++G+ A + K +M++ +PN ++ G CREG+ + ++ MK
Sbjct: 231 TCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMR 290
Query: 414 HLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAM 473
N ++SL+ GF E D V MK + + + YS ++N G + +A
Sbjct: 291 VEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAA 350
Query: 474 MVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLN 533
V+K+M+ G+K D AYS + G+ A+ + +L ++ E +P+V + +++
Sbjct: 351 QVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI---VESRPNVVIFTTVIS 407
Query: 534 AFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
+ ++ AM V N M G P+ T + +
Sbjct: 408 GWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 441
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 200/417 (47%), Gaps = 17/417 (4%)
Query: 140 FNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGI 199
FN+V+N + G+ A++ + K L + P T+N +IK G +++ E+ +
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKM-KELGLNPTTSTYNTLIKGYGIAGKPERSSELL-DL 175
Query: 200 HLR----NCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCK 255
L + P+ T++ L+ CK+ +++EA ++ +M+ G P+ +N + + +
Sbjct: 176 MLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQ 235
Query: 256 KGDLIRA-AKLVDNMSLK-GCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPND 313
KG+ +RA +++V+ M +K PN T +V G CR+G++ + + +M + N
Sbjct: 236 KGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANL 295
Query: 314 VTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKE 373
V F +L++GFV+ VL ++E + + YS++++ G E A Q++KE
Sbjct: 296 VVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKE 355
Query: 374 MMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGD 433
M++ G +P+ YS L G R + +A E L+E PN +++++ G+ G
Sbjct: 356 MVKAGVKPDAHAYSILAKGYVRAKEPKKAEE-LLETLIVESRPNVVIFTTVISGWCSNGS 414
Query: 434 CHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSS 493
A+ V+ +M + N + L+ G + + +A V + M G+K + +
Sbjct: 415 MDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLL 474
Query: 494 MIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNI 550
+ + A L D+ K N + C++ E+ L YQ+ + + ++L I
Sbjct: 475 LAEAWRVAGLTDESNKAINALKCKDIEIAK--------LEKLYQKQSSGSSFNLLQI 523
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 167/347 (48%), Gaps = 10/347 (2%)
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK 308
L++ L ++G A + ++ G P+ ++Y TL+ + + + S+++++ +
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 309 CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAM 368
+ + F +++ F + G D L+ ++E G Y++LI G GK E +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 369 QLWKEMMEKG---CEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
+L M+E+G PN ++ L+ C++ K +EA E + +M+ G P++ TY+++
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 426 RGFFEAGDCHKA---ILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSR 482
+ + G+ +A ++ MK + + C I++ G C+ G++ + + ++M
Sbjct: 231 TCYVQKGETVRAESEVVEKMVMKEKAKPNGRTC-GIVVGGYCREGRVRDGLRFVRRMKEM 289
Query: 483 GIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNIS 542
++ ++V ++S+I+GF D ++ M +E ++ DV TY+ ++NA+ +
Sbjct: 290 RVEANLVVFNSLINGFVEVMDRDGIDEVLTLM--KECNVKADVITYSTVMNAWSSAGYME 347
Query: 543 RAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVV 589
+A V M+ G PD I K P+ E L+ L+V
Sbjct: 348 KAAQVFKEMVKAGVKPDAHAYSILAKGYV-RAKEPKKAEELLETLIV 393
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 103/221 (46%), Gaps = 7/221 (3%)
Query: 352 SSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKN 411
+ L++ L + G+ A ++K + E G P+ + Y+ L+ + + + + E++
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 412 KGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLME 471
G +S +++++ F E+G+ A+ +MK N Y+ LI G GK
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 472 AMMVWKQMLSRG---IKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATY 528
+ + ML G + ++ ++ ++ +C + V++ ++ +M +E ++PD TY
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKM--EECGVRPDTVTY 226
Query: 529 NILLNAFYQQNNISRAMD--VLNIMLDQGCDPDFITCDIFL 567
N + + Q+ RA V +++ + P+ TC I +
Sbjct: 227 NTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVV 267
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 172/342 (50%), Gaps = 3/342 (0%)
Query: 159 FYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGL 218
F+ + + + +++++++AL + L ++V +G+ PD + MD
Sbjct: 137 FFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSF 196
Query: 219 CKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVP-N 277
+ + A+ L +E + G + FN L+ LC++ + AAK V N KG +P +
Sbjct: 197 VRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSH-VSAAKSVFNAK-KGNIPFD 254
Query: 278 EVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLI 337
+YN ++ G + G++ + +L +MV + P+ +++ L+ G + GR +D +
Sbjct: 255 SCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFD 314
Query: 338 SLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREG 397
+++ +G+ + +Y+++I F+ +M+ ++ M+++ CEPN YS L+ GL +
Sbjct: 315 NIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGR 374
Query: 398 KADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYS 457
K +A E EM ++G LP + +S ++ G H A++++++ + C +E Y
Sbjct: 375 KVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYK 434
Query: 458 ILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFC 499
+L+ L + GK + VW +M G DV Y ++ G C
Sbjct: 435 LLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLC 476
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 161/349 (46%), Gaps = 3/349 (0%)
Query: 104 FIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHV 163
+ ++ + H+ +A+ LF E+ F K + +SFN++L + + H A ++
Sbjct: 189 LTIAMDSFVRVHYVRRAIELFEESES-FGVKCSTESFNALLRCLCERSHVSAAKSVFN-- 245
Query: 164 CKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGR 223
K NI + ++N++I K+G V++ +V + + PD +YS L++GL + GR
Sbjct: 246 AKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGR 305
Query: 224 IDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNT 283
I+++V + D ++ +G P+ V+N +I D + + M + C PN TY+
Sbjct: 306 INDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSK 365
Query: 284 LVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERG 343
LV GL + K++ A+ + +M++ +P + + G + + G
Sbjct: 366 LVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAG 425
Query: 344 HRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAR 403
R +E Y L+ L + GK + +W EM E G + VY ++DGLC G + A
Sbjct: 426 CRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAV 485
Query: 404 EYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHN 452
+ E KG PN F YS L + A ++ ++K N
Sbjct: 486 LVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATEN 534
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 176/396 (44%), Gaps = 6/396 (1%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALE-FYSHVCKSLNIQPNGLTF 176
E V F E + V S++ +L + + F ++ VC+ +N P+
Sbjct: 132 EAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVN--PDLECL 189
Query: 177 NLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQI 236
+ + + +V V +A+E+F + +++ L+ LC+ + A S+ + +
Sbjct: 190 TIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK- 248
Query: 237 EGTFP-NPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLN 295
G P + +N++IS K G++ K++ M G P+ ++Y+ L++GL R G++N
Sbjct: 249 -GNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRIN 307
Query: 296 KAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLI 355
+V + + + VP+ + ++ F+ + + + N YS L+
Sbjct: 308 DSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLV 367
Query: 356 SGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL 415
SGL K K A+++++EM+ +G P T + ++ + LC G A + + G
Sbjct: 368 SGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCR 427
Query: 416 PNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMV 475
+ Y L++ G C + VW EM+ + + Y +++GLC G L A++V
Sbjct: 428 ISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLV 487
Query: 476 WKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLF 511
++ + +G + YS + + + KLF
Sbjct: 488 MEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLF 523
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 184/411 (44%), Gaps = 40/411 (9%)
Query: 151 GHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLR--NCAPDS 208
G F + L+ S + KSL+ GL+ ++V L + L +A+ F +R D
Sbjct: 92 GVFLQKLKGKSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDV 151
Query: 209 YTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDN 268
+YS ++ L + + +L M EG P+ + + + + + RA +L +
Sbjct: 152 GSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEE 211
Query: 269 MSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGR 328
G + ++N L+ LC + ++ A S+ N N +P D
Sbjct: 212 SESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGN--IPFDSC------------- 256
Query: 329 ASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSA 388
Y+ +ISG K G+ E ++ KEM+E G P+ + YS
Sbjct: 257 ---------------------SYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSH 295
Query: 389 LIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNS 448
LI+GL R G+ +++ E +K+KG++P++ Y++++ F A D +++ ++ M +
Sbjct: 296 LIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEE 355
Query: 449 CNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGM 508
C N YS L++GL K K+ +A+ ++++MLSRG+ +S + C+ M
Sbjct: 356 CEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAM 415
Query: 509 KLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
++ + ++A + + Y +LL + ++V + M + G D
Sbjct: 416 VIYQK--SRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSD 464
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 118/277 (42%), Gaps = 24/277 (8%)
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
YS ++ L + F M + K M+ +G P+ + +D R A E E +
Sbjct: 154 YSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESE 213
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
+ G ++ ++++L+R E A V+ K N + Y+I+I+G K G++
Sbjct: 214 SFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGN-IPFDSCSYNIMISGWSKLGEVE 272
Query: 471 EAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNI 530
E V K+M+ G D ++YS +I G ++ +++F+ + + PD YN
Sbjct: 273 EMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNI--KHKGNVPDANVYNA 330
Query: 531 LLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVR 590
++ F + +M MLD+ C+P+ E +LV
Sbjct: 331 MICNFISARDFDESMRYYRRMLDEECEPNL---------------------ETYSKLVSG 369
Query: 591 LVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLC 627
L+K ++ A +I E ML R +LP ++ LC
Sbjct: 370 LIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLC 406
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 176/350 (50%), Gaps = 3/350 (0%)
Query: 167 LNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDE 226
L + P+ +T+N +IK + +D+A V R + PD TY++L+ G K ++
Sbjct: 42 LGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNR 101
Query: 227 AVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV-DNMSLKGCVPNEVTYNTLV 285
+ L DEM G P+ + +N L+S K G A K++ +++ L G VP TYN L+
Sbjct: 102 VLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILL 161
Query: 286 DGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR 345
D LC+ G + A+ L + ++ P +T+ L++G K R ++ L++ G+
Sbjct: 162 DALCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYT 220
Query: 346 GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREY 405
N Y++++ FK + E +QL+ +M ++G + A++ L + G+A+EA E
Sbjct: 221 PNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYEC 280
Query: 406 LIEMKNKGHLPNSF-TYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLC 464
+ E+ G +Y++L+ +F+ G+ + +E++ ++ ++I++NGL
Sbjct: 281 MHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLL 340
Query: 465 KNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
G A + G++ VV + +I G C A VD+ M+LF M
Sbjct: 341 NIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASM 390
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 169/333 (50%), Gaps = 7/333 (2%)
Query: 169 IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAV 228
I+P+ T+N +I K ++++ +++F + +PD ++Y+TLM K GR EA
Sbjct: 79 IEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAF 138
Query: 229 SLLDE-MQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDG 287
+L E + + G P +N+L+ ALCK G A +L ++ + P +TYN L++G
Sbjct: 139 KILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILING 197
Query: 288 LCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGN 347
LC+ ++ ++ ++ + PN VT+ T++ + K R G + + +++ G+ +
Sbjct: 198 LCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFD 257
Query: 348 EYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVV-YSALIDGLCREGKADEAREYL 406
+ +++S L K G+ E A + E++ G +V Y+ L++ ++G D + L
Sbjct: 258 GFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLL 317
Query: 407 IEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKN 466
E++ KG P+ +T++ ++ G G+ A + + V + LI+GLCK
Sbjct: 318 EEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKA 377
Query: 467 GKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFC 499
G + AM ++ M R D Y+S++H C
Sbjct: 378 GHVDRAMRLFASMEVR----DEFTYTSVVHNLC 406
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 189/398 (47%), Gaps = 9/398 (2%)
Query: 103 NFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSH 162
+ + K Y + ++A + RM E + V ++NS+++ + +R L+ +
Sbjct: 50 TYNTLIKGYTRFIGIDEAYAVTRRMR-EAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDE 108
Query: 163 VCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFR-GIHLRNCAPDSYTYSTLMDGLCKE 221
+ S + P+ ++N ++ K+G +A ++ IHL P TY+ L+D LCK
Sbjct: 109 MLHS-GLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKS 167
Query: 222 GRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTY 281
G D A+ L ++ P +N+LI+ LCK + ++ + G PN VTY
Sbjct: 168 GHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTY 226
Query: 282 NTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEE 341
T++ + ++ K + L +M + +V +K GRA + + L
Sbjct: 227 TTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVR 286
Query: 342 RGHRGNEYI-YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
G R + + Y++L++ FK+G + L +E+ KG +P+ ++ +++GL G
Sbjct: 287 SGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTG 346
Query: 401 EAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILI 460
A ++L + G P+ T + L+ G +AG +A+ ++ M+ +E Y+ ++
Sbjct: 347 GAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEV----RDEFTYTSVV 402
Query: 461 NGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGF 498
+ LCK+G+L+ A + ++G+K+ A +++ G
Sbjct: 403 HNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSGI 440
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 173/361 (47%), Gaps = 11/361 (3%)
Query: 215 MDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGC 274
++ LCK ++ A +LL + G P+ +N LI + + A + M G
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 275 VPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGAS 334
P+ TYN+L+ G + LN+ + L ++M+ + P+ ++ TL+ + K GR +
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 335 VLI-SLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGL 393
+L + G Y+ L+ L K G ++A++L+K + + +P + Y+ LI+GL
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGL 198
Query: 394 CREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNE 453
C+ + + E+K G+ PN+ TY+++++ +F+ K + ++ +MK +
Sbjct: 199 CKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDG 258
Query: 454 VCYSILINGLCKNGKLMEAMMVWKQMLSRGIK-LDVVAYSSMIHGFCNAQLVDQGMKLFN 512
+++ L K G+ EA +++ G + D+V+Y++++ N D + +
Sbjct: 259 FANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLL----NLYFKDGNLDAVD 314
Query: 513 QMLCQEAE---LQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKT 569
+L +E E L+PD T+ I++N N A L + + G P +TC+ +
Sbjct: 315 DLL-EEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDG 373
Query: 570 L 570
L
Sbjct: 374 L 374
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 177/394 (44%), Gaps = 26/394 (6%)
Query: 245 VFNVLISALCKKGDLIRAAKL-VDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQ 303
+ N+ +++LCK +L RA L +D + L G +P+ +TYNTL+ G R +++A ++ +
Sbjct: 15 LLNISVNSLCKFRNLERAETLLIDGIRL-GVLPDVITYNTLIKGYTRFIGIDEAYAVTRR 73
Query: 304 MVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGK 363
M P+ T+ +L+ G K + + + G + + Y++L+S FK G+
Sbjct: 74 MREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGR 133
Query: 364 FEHAMQLWKEMME-KGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYS 422
A ++ E + G P Y+ L+D LC+ G D A E +K++ P TY+
Sbjct: 134 HGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVK-PELMTYN 192
Query: 423 SLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSR 482
L+ G ++ + +E+K + N V Y+ ++ K ++ + + ++ +M
Sbjct: 193 ILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE 252
Query: 483 GIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNIS 542
G D A +++ ++ + ++ L + D+ +YN LLN +++ N+
Sbjct: 253 GYTFDGFANCAVVSALIKTGRAEEAYECMHE-LVRSGTRSQDIVSYNTLLNLYFKDGNLD 311
Query: 543 RAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASK 602
D+L + +G PD T I + L + N T GA K
Sbjct: 312 AVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGN---------------------TGGAEK 350
Query: 603 IIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
+ + + + P T ++ LCK ++ +A+
Sbjct: 351 HLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAM 384
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 136/310 (43%), Gaps = 42/310 (13%)
Query: 137 VKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVF 196
+ ++N +L+ + + GH A+E + H+ KS ++P +T+N++I LCK V +
Sbjct: 154 IDTYNILLDALCKSGHTDNAIELFKHL-KS-RVKPELMTYNILINGLCKSRRVGSVDWMM 211
Query: 197 RGIHLRNCAPDSYTYSTLM--------------------------DG---------LCKE 221
R + P++ TY+T++ DG L K
Sbjct: 212 RELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKT 271
Query: 222 GRIDEAVSLLDEMQIEGTFPNPFV-FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVT 280
GR +EA + E+ GT V +N L++ K G+L L++ + +KG P++ T
Sbjct: 272 GRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYT 331
Query: 281 YNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLE 340
+ +V+GL G A L + P+ VT L+ G K G + S+E
Sbjct: 332 HTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASME 391
Query: 341 ERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
R +E+ Y+S++ L K+G+ A +L KG + + A++ G+
Sbjct: 392 VR----DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSGIRETVSYQ 447
Query: 401 EAREYLIEMK 410
AR+ I++K
Sbjct: 448 AARKTHIKIK 457
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 151/338 (44%), Gaps = 46/338 (13%)
Query: 50 EIFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFK 109
E+FK H K +++ LI L S S++ +++++K+ + + K
Sbjct: 175 ELFK---HLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLK 231
Query: 110 AYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNI 169
Y K EK + LF +M+ E + +F+ N
Sbjct: 232 MYFKTKRIEKGLQLFLKMKKEGY------TFDGFANCA---------------------- 263
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNC-APDSYTYSTLMDGLCKEGRIDEAV 228
V+ AL K G ++A E + + D +Y+TL++ K+G +D
Sbjct: 264 ---------VVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVD 314
Query: 229 SLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGL 288
LL+E++++G P+ + ++++ L G+ A K + + G P+ VT N L+DGL
Sbjct: 315 DLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGL 374
Query: 289 CRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNE 348
C+ G +++A+ L M V ++ T+ ++VH K GR + +L+S +G +
Sbjct: 375 CKAGHVDRAMRLFASME----VRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPS 430
Query: 349 YIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVY 386
+++SG+ + ++ A + + ++ E NT++Y
Sbjct: 431 SARRAVLSGIRETVSYQAARKTHIK-IKAAIECNTLMY 467
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 217/442 (49%), Gaps = 28/442 (6%)
Query: 158 EFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNC-APDSYTYSTLMD 216
+F + + + +Q + V+K++ + +A+EVF ++LR+ +P++ + ++
Sbjct: 141 QFVADILDARLVQMTPTDYCFVVKSVGQESW-QRALEVFEWLNLRHWHSPNARMVAAILG 199
Query: 217 GLCKEGRIDEAVSLLDEMQIEGTFPNPF-VFNVLISALCKKGDLIRAAKLVDNMSLKGCV 275
L + + AV + + E T + V+N ++ + G +A +LVD M +GCV
Sbjct: 200 VLGRWNQESLAVEIF--TRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCV 257
Query: 276 PNEVTYNTLVDGLCRKGKL--NKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGA 333
P+ +++NTL++ + G L N AV LL+ + + P+ +T+ TL+ +
Sbjct: 258 PDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAV 317
Query: 334 SVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGL 393
V +E + + + Y+++IS + G A +L+ E+ KG P+ V Y++L+
Sbjct: 318 KVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAF 377
Query: 394 CREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSC-NHN 452
RE ++ +E +M+ G + TY++++ + + G A+ ++K+MK S N +
Sbjct: 378 ARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPD 437
Query: 453 EVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFN 512
+ Y++LI+ L K + +EA + +ML GIK + YS++I G+ A ++ F+
Sbjct: 438 AITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFS 497
Query: 513 QMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL----- 567
ML + +PD Y+++L+ + N +A + M+ G P + ++ +
Sbjct: 498 CML--RSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMK 555
Query: 568 --------KTLRD-----NMNP 576
KT+RD MNP
Sbjct: 556 ENRSDDIQKTIRDMEELCGMNP 577
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 169/339 (49%), Gaps = 12/339 (3%)
Query: 133 CKQTVKSFNSVLNVIIQEGHF--HRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVD 190
C + SFN+++N ++ G + A+E V S ++P+ +T+N ++ A + +D
Sbjct: 256 CVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNS-GLRPDAITYNTLLSACSRDSNLD 314
Query: 191 QAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLI 250
AV+VF + C PD +TY+ ++ + G EA L E++++G FP+ +N L+
Sbjct: 315 GAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLL 374
Query: 251 SALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA-NKC 309
A ++ + + ++ M G +E+TYNT++ ++G+L+ A+ L M +
Sbjct: 375 YAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGR 434
Query: 310 VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
P+ +T+ L+ K R + A+++ + + G + YS+LI G K GK E A
Sbjct: 435 NPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAED 494
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF 429
+ M+ G +P+ + YS ++D L R + +A +M + GH P+ Y ++ G
Sbjct: 495 TFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLM 554
Query: 430 E---AGDCHKAILVWKEMKNNSCNHNEV-CYSILINGLC 464
+ + D K I +E+ C N + S+L+ G C
Sbjct: 555 KENRSDDIQKTIRDMEEL----CGMNPLEISSVLVKGEC 589
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 136/598 (22%), Positives = 234/598 (39%), Gaps = 85/598 (14%)
Query: 103 NFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSH 162
+ + YG+ +A LF +E + V ++NS+L +E + + E Y
Sbjct: 334 TYNAMISVYGRCGLAAEAERLFMELELKGFFPDAV-TYNSLLYAFARERNTEKVKEVYQQ 392
Query: 163 VCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFR---GIHLRNCAPDSYTYSTLMDGLC 219
+ K + + +T+N +I K G +D A+++++ G+ RN PD+ TY+ L+D L
Sbjct: 393 MQK-MGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN--PDAITYTVLIDSLG 449
Query: 220 KEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEV 279
K R EA +L+ EM G P ++ LI K G A M G P+ +
Sbjct: 450 KANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNL 509
Query: 280 TYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISL 339
Y+ ++D L R + KA L M+++ P+ + ++ G +K+ R+ D + +
Sbjct: 510 AYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDM 569
Query: 340 EERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKA 399
EE I S L+ G F+ A + K + G E +++ G+
Sbjct: 570 EELCGMNPLEISSVLVKGEC----FDLAARQLKVAITNGYELENDTLLSILGSYSSSGRH 625
Query: 400 DEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNH-----NEV 454
EA E L +K +L+ + + A+ E + C H +
Sbjct: 626 SEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAAL---DEYFADPCVHGWCFGSST 682
Query: 455 CYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
Y L++ N EA V+ + G + SM+ +C + ++ NQ
Sbjct: 683 MYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQA 742
Query: 515 ------------------------LCQEAE----------LQPDVATYNILLNAFYQQNN 540
L Q+AE PD+ T+N L++A+ Q
Sbjct: 743 ETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGC 802
Query: 541 ISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIG- 599
RA + N M+ G P + +I L L DGR L+EL V +V+ + +G
Sbjct: 803 YERARAIFNTMMRDGPSPTVESINILLHAL------CVDGR--LEELYV-VVEELQDMGF 853
Query: 600 ----------------ASKIIEV------MLDRCLLPEASTWAIVVQQLCKPRNIRKA 635
A I EV M LP + ++++ LCK + +R A
Sbjct: 854 KISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 181/398 (45%), Gaps = 4/398 (1%)
Query: 191 QAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG-TFPNPFVFNVL 249
+A +VF + L C +++ CK G + A ++++ + +G F ++ +
Sbjct: 699 EASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDI 758
Query: 250 ISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC 309
I A K+ +A +V N+ G P+ T+N+L+ + G +A ++ N M+ +
Sbjct: 759 IEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGP 818
Query: 310 VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
P + L+H GR + V+ L++ G + ++ ++ + G +
Sbjct: 819 SPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKK 878
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF 429
++ M G P +Y +I+ LC+ + +A + EM+ ++S+++ +
Sbjct: 879 IYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYT 938
Query: 430 EAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVV 489
D K + V++ +K +E Y+ LI C++ + E ++ +QM + G+ +
Sbjct: 939 AIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLD 998
Query: 490 AYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLN 549
Y S+I F + ++Q +LF ++L + +L D + Y+ ++ + S+A +L
Sbjct: 999 TYKSLISAFGKQKCLEQAEQLFEELLSKGLKL--DRSFYHTMMKISRDSGSDSKAEKLLQ 1056
Query: 550 IMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDEL 587
+M + G +P T + + + + N PQ+ + L L
Sbjct: 1057 MMKNAGIEPTLATMHLLMVSYSSSGN-PQEAEKVLSNL 1093
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 174/393 (44%), Gaps = 2/393 (0%)
Query: 176 FNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQ 235
+ +I+A K L +A V + PD T+++LM + G + A ++ + M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 236 IEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLN 295
+G P N+L+ ALC G L +V+ + G ++ + ++D R G +
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 296 KAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLI 355
+ + + M A +P + ++ K R D ++ +EE + I++S++
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 356 SGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL 415
++ +Q+++ + E G EP+ Y+ LI CR+ + +E + +M+N G
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 416 PNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMV 475
P TY SL+ F + +A +++E+ + + Y ++ +G +A +
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKL 1054
Query: 476 WKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAF 535
+ M + GI+ + ++ + ++ + K+ + + E EL Y+ +++A+
Sbjct: 1055 LQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELT--TLPYSSVIDAY 1112
Query: 536 YQQNNISRAMDVLNIMLDQGCDPDFITCDIFLK 568
+ + + ++ L M +G +PD F++
Sbjct: 1113 LRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVR 1145
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 134/277 (48%), Gaps = 26/277 (9%)
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREG--KADEAREYLI 407
+Y++++ + GKF A +L M ++GC P+ + ++ LI+ + G + A E L
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 408 EMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNG 467
++N G P++ TY++L+ + A+ V+++M+ + C + Y+ +I+ + G
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 468 KLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVAT 527
EA ++ ++ +G D V Y+S+++ F + ++ +++ QM Q+ D T
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQM--QKMGFGKDEMT 404
Query: 528 YNILLNAFYQQNNISRAMDVLNIMLD-QGCDPDFITCDIFLKTLRDNMNPPQDGREFLDE 586
YN +++ + +Q + A+ + M G +PD IT + + +L
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLG--------------- 449
Query: 587 LVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVV 623
K RT+ A+ ++ MLD + P T++ ++
Sbjct: 450 ------KANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/423 (19%), Positives = 172/423 (40%), Gaps = 8/423 (1%)
Query: 69 FYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRME 128
+ +IE + E ++ +++ R K + + AY + E+A +F+ M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 129 AEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHV--CKSLNIQPNGLTFNLVIKALCKV 186
+ TV+S N +L+ + +G E Y V + + + + + L++ A +
Sbjct: 815 RD-GPSPTVESINILLHALCVDGRLE---ELYVVVEELQDMGFKISKSSILLMLDAFARA 870
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPF-V 245
G + + +++ + P Y +++ LCK R+ +A ++ EM+ E F +
Sbjct: 871 GNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEME-EANFKVELAI 929
Query: 246 FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
+N ++ D + ++ + G P+E TYNTL+ CR + + L+ QM
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE 365
P T+ +L+ F KQ + L +G + + Y +++ G
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDS 1049
Query: 366 HAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
A +L + M G EP L+ G EA + L +K+ + YSS++
Sbjct: 1050 KAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVI 1109
Query: 426 RGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIK 485
+ + D + I EMK + ++ + + + +E M++ K + G
Sbjct: 1110 DAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGFD 1169
Query: 486 LDV 488
L +
Sbjct: 1170 LPI 1172
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/475 (24%), Positives = 217/475 (45%), Gaps = 34/475 (7%)
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
+L P ++N VIK L + +++ + I + PD TY +++ LCK+ D
Sbjct: 505 NLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRD 564
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
A +++D M+ G P +++ +I +L K+G ++ A + M G P+E+ Y ++
Sbjct: 565 AAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMI 624
Query: 286 DGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR 345
+ R G++++A L+ ++V + P+ T+ L+ GFVK G G L + E G
Sbjct: 625 NTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLS 684
Query: 346 GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREY 405
N +Y++LI K+G F+ + L+ M E + + + Y L+ GL R + R+
Sbjct: 685 PNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQV 744
Query: 406 LIEMKNKG---HLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILING 462
++E + L + S+ G A+ V ++K S N ++ +I G
Sbjct: 745 IVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVK-KSIIPNLYLHNTIITG 803
Query: 463 LCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQ 522
C G+L EA + M GI ++V Y+ ++ A ++ + LF C +
Sbjct: 804 YCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTNC-----E 858
Query: 523 PDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGRE 582
PD Y+ LL + R +D L +ML+ + +NP +D E
Sbjct: 859 PDQVMYSTLLKGLC---DFKRPLDALALMLEMQ---------------KSGINPNKDSYE 900
Query: 583 FLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEA--STWAIVVQQLCKPRNIRKA 635
+L+ L + T+ A K+++ M + P + TW I + LC+ + +R+A
Sbjct: 901 ---KLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYI--LCEEKKLREA 950
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 134/588 (22%), Positives = 239/588 (40%), Gaps = 104/588 (17%)
Query: 83 ASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRM-EAEFHCKQTVKSFN 141
A E L M+ + + + + K Y K + A+ L+ RM E F + FN
Sbjct: 254 AEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCI--FN 311
Query: 142 SVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVF----- 196
++++ ++ G + +S + K +Q N T++++I + CK G VD A+ +F
Sbjct: 312 TLIHGFMKLGMLDKGRVMFSQMIKK-GVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTG 370
Query: 197 -----RGIH-------------------------LRN-CAPDSYTYSTLMDGLCKEGRID 225
R +H L N PD TY L+ L K +
Sbjct: 371 SEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELK 430
Query: 226 EAVSLLDEMQIEGTFPNPFVFN-----------------------------VLISALCKK 256
A+ +L + G NP V + V+ +ALC +
Sbjct: 431 YAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQ 490
Query: 257 GDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTF 316
+ I A ++ M GC P +YN+++ L ++ + SL+N + VP+ T+
Sbjct: 491 RNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTY 550
Query: 317 GTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMME 376
+V+ K+ +++ ++EE G R IYSS+I L K+G+ A + + +M+E
Sbjct: 551 LIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLE 610
Query: 377 KGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHK 436
G +P+ + Y +I+ R G+ DEA E + E+ P+SFTY+ L+ GF + G K
Sbjct: 611 SGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEK 670
Query: 437 AILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIH 496
+M + + N V Y+ LI K G + ++ M IK D +AY +++
Sbjct: 671 GCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLS 730
Query: 497 GFCNAQ--------LVDQGMKLFNQMLCQEAELQ-------------------------- 522
G A +V+ G + Q L + L
Sbjct: 731 GLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSI 790
Query: 523 -PDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKT 569
P++ +N ++ + + A + L M +G P+ +T I +K+
Sbjct: 791 IPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKS 838
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/496 (22%), Positives = 209/496 (42%), Gaps = 54/496 (10%)
Query: 171 PNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSL 230
P+ + +LV+ LC +A F + R + L GLC G ++EA+ +
Sbjct: 164 PSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGM 223
Query: 231 LDEMQIEGTFPNPF-VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
LD + P P ++ L CK+G A L D+M + G ++V Y L+ C
Sbjct: 224 LDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYC 283
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEY 349
+ + A+ L +MV + F TL+HGF+K G G + + ++G + N +
Sbjct: 284 KDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVF 343
Query: 350 IYSSLISGLFKEGKFEHAMQLW-KEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIE 408
Y +I KEG ++A++L+ + N Y+ LI G ++G D+A + L+
Sbjct: 344 TYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMR 403
Query: 409 MKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNE--------------- 453
M + G +P+ TY L++ + + A+++ + + +N C N
Sbjct: 404 MLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVES 463
Query: 454 --------------VCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFC 499
V +++ LC + A+ ++M++ G +Y+S+I
Sbjct: 464 LLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLF 523
Query: 500 NAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
+++ L N + QE + PDV TY I++N ++N+ A +++ M + G P
Sbjct: 524 QENIIEDLASLVN--IIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRP- 580
Query: 560 FITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTW 619
T I+ ++ L K+ R + A + ML+ + P+ +
Sbjct: 581 --TVAIY------------------SSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAY 620
Query: 620 AIVVQQLCKPRNIRKA 635
I++ + I +A
Sbjct: 621 MIMINTYARNGRIDEA 636
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 196/443 (44%), Gaps = 45/443 (10%)
Query: 81 DFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSF 140
D ASL ++Q++ V ++++ K + + A + ME E + TV +
Sbjct: 530 DLASLVNIIQELDFVPDV---DTYLIVVNELCKKNDRDAAFAIIDAME-ELGLRPTVAIY 585
Query: 141 NSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIH 200
+S++ + ++G A E ++ + +S IQP+ + + ++I + G +D+A E+ +
Sbjct: 586 SSIIGSLGKQGRVVEAEETFAKMLES-GIQPDEIAYMIMINTYARNGRIDEANELVEEVV 644
Query: 201 LRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLI 260
P S+TY+ L+ G K G +++ LD+M +G PN ++ LI KKGD
Sbjct: 645 KHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFK 704
Query: 261 RAAKLVDNMSLKGCVPNEVTYNTLVDGL----CRKGKLNKAVS-----LLNQMVANK--- 308
+ L M + + Y TL+ GL RK K V LL +++ K
Sbjct: 705 FSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLV 764
Query: 309 -------------------------CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERG 343
+PN T++ G+ GR + + L S+++ G
Sbjct: 765 SIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEG 824
Query: 344 HRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAR 403
N Y+ L+ + G E A+ L++ CEP+ V+YS L+ GLC + +A
Sbjct: 825 IVPNLVTYTILMKSHIEAGDIESAIDLFEG---TNCEPDQVMYSTLLKGLCDFKRPLDAL 881
Query: 404 EYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGL 463
++EM+ G PN +Y L++ + +A+ V K+M + ++ LI L
Sbjct: 882 ALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYIL 941
Query: 464 CKNGKLMEAMMVWKQMLSRGIKL 486
C+ KL EA ++ M+ G L
Sbjct: 942 CEEKKLREARALFAIMVQSGRSL 964
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 161/316 (50%), Gaps = 3/316 (0%)
Query: 224 IDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNT 283
+ +A+ + + E T N ++ N ++S L K G L KL D M G P+ VTYNT
Sbjct: 147 VSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNT 206
Query: 284 LVDGLCR-KGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER 342
L+ G + K KA+ L+ ++ N + V +GT++ GR+ + + + ++
Sbjct: 207 LLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVE 266
Query: 343 GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
GH N Y YSSL++ +G ++ A +L EM G PN V+ + L+ + G D +
Sbjct: 267 GHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRS 326
Query: 403 REYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILING 462
RE L E+++ G+ N Y LM G +AG +A ++ +MK + SI+I+
Sbjct: 327 RELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISA 386
Query: 463 LCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQ 522
LC++ + EA + + + K D+V ++M+ +C A ++ M++ +M E +
Sbjct: 387 LCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKM--DEQAVS 444
Query: 523 PDVATYNILLNAFYQQ 538
PD T++IL+ F ++
Sbjct: 445 PDYNTFHILIKYFIKE 460
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 189/418 (45%), Gaps = 51/418 (12%)
Query: 49 AEIFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIF 108
AE +S H SY L+ S I ++ SSDF L ++R V ++ VI
Sbjct: 57 AEAPRSKRHS-NSY----LARKSAISEVQRSSDF------LSSLQRLATVLKVQDLNVIL 105
Query: 109 KAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLN 168
+ +G + + + LF M+ H K +V +++S + + + +ALE Y + +
Sbjct: 106 RDFGISGRWQDLIQLFEWMQQ--HGKISVSTYSSCIK-FVGAKNVSKALEIYQSIPDE-S 161
Query: 169 IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCK-------- 220
+ N N ++ L K G +D +++F + PD TY+TL+ G K
Sbjct: 162 TKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKA 221
Query: 221 ----------------------------EGRIDEAVSLLDEMQIEGTFPNPFVFNVLISA 252
GR +EA + + +M++EG PN + ++ L+++
Sbjct: 222 IELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNS 281
Query: 253 LCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPN 312
KGD +A +L+ M G VPN+V TL+ + G +++ LL+++ + N
Sbjct: 282 YSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAEN 341
Query: 313 DVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWK 372
++ + L+ G K G+ + S+ ++ +G R + Y S +IS L + +F+ A +L +
Sbjct: 342 EMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSR 401
Query: 373 EMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFE 430
+ + + V+ + ++ CR G+ + + +M + P+ T+ L++ F +
Sbjct: 402 DSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIK 459
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 128/250 (51%)
Query: 165 KSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRI 224
K+ N +P ++N ++ +L V V++ + +PD TY+ L+ + G++
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 225 DEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTL 284
D L DEM +G P+ + +N+L+ L K + A +++M G P+ + Y TL
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 285 VDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGH 344
+DGL R G L L++MV C P+ V + ++ G+V G + + +G
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 345 RGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE 404
N + Y+S+I GL G+F A L KEM +GC PN VVYS L+ L + GK EAR+
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARK 450
Query: 405 YLIEMKNKGH 414
+ EM KGH
Sbjct: 451 VIREMVKKGH 460
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 165/350 (47%), Gaps = 36/350 (10%)
Query: 134 KQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAV 193
+ TV S++ ++ + + G + + + TFNL+I + + GL QAV
Sbjct: 146 RHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQD-GFPTTARTFNLLICSCGEAGLAKQAV 204
Query: 194 EVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISAL 253
F N P ++Y+ +++ SLL Q + LI +
Sbjct: 205 VQFMKSKTFNYRPFKHSYNAILN------------SLLGVKQYK-----------LIEWV 241
Query: 254 CKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPND 313
K+ M G P+ +TYN L+ R GK+++ L ++M + P+
Sbjct: 242 YKQ------------MLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDS 289
Query: 314 VTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKE 373
T+ L+H K + + L ++E G + Y++LI GL + G E E
Sbjct: 290 YTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDE 349
Query: 374 MMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGD 433
M++ GC P+ V Y+ +I G G+ D+A+E EM KG LPN FTY+S++RG AG+
Sbjct: 350 MVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGE 409
Query: 434 CHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRG 483
+A + KEM++ CN N V YS L++ L K GKL EA V ++M+ +G
Sbjct: 410 FREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 142/309 (45%), Gaps = 3/309 (0%)
Query: 280 TYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISL 339
+Y+ L+ G+ L+++MV + TF L+ + G A +
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 340 EERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKA 399
+ +R ++ Y+++++ L +++ ++K+M+E G P+ + Y+ L+ R GK
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 400 DEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSIL 459
D EM G P+S+TY+ L+ + A+ MK + + + Y+ L
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 460 INGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEA 519
I+GL + G L +M+ G + DVV Y+ MI G+ + +D+ ++F +M +
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVK-G 389
Query: 520 ELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQD 579
+L P+V TYN ++ A +L M +GC+P+F+ + LR +
Sbjct: 390 QL-PNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLR-KAGKLSE 447
Query: 580 GREFLDELV 588
R+ + E+V
Sbjct: 448 ARKVIREMV 456
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 126/316 (39%), Gaps = 66/316 (20%)
Query: 344 HRGNEYIYSSLISGLFKE-GKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
H N Y L+ +F E G+++ +L EM++ G ++ LI C G+A A
Sbjct: 147 HTVNSY---HLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLI---CSCGEAGLA 200
Query: 403 REYLIE-MKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILIN 461
++ +++ MK+K F +S Y+ ++N
Sbjct: 201 KQAVVQFMKSKTFNYRPFKHS---------------------------------YNAILN 227
Query: 462 GL--CKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEA 519
L K KL+E V+KQML G DV+ Y+ ++ +D+ +LF++M
Sbjct: 228 SLLGVKQYKLIE--WVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEM--ARD 283
Query: 520 ELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQD 579
PD TYNILL+ + N A+ LN M + G DP + + L N +
Sbjct: 284 GFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGN-LEA 342
Query: 580 GREFLDELV---------------VRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQ 624
+ FLDE+V V A ++ M + LP T+ +++
Sbjct: 343 CKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 402
Query: 625 QLCKPRNIRKAISECW 640
LC R+A CW
Sbjct: 403 GLCMAGEFREA---CW 415
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 133 CKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQA 192
C+ V + ++ + G +A E + + + PN T+N +I+ LC G +A
Sbjct: 355 CRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQL-PNVFTYNSMIRGLCMAGEFREA 413
Query: 193 VEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTF 240
+ + + R C P+ YSTL+ L K G++ EA ++ EM +G +
Sbjct: 414 CWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHY 461
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 212/449 (47%), Gaps = 35/449 (7%)
Query: 117 PEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTF 176
P +A +F + AE + ++ S+ ++L + + + S V +S + + + F
Sbjct: 61 PHEAQTVFKTL-AETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQS-GTKLDSIFF 118
Query: 177 NLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQI 236
N VI A + G ++ AV+ + P + TY+TL+ G G+ + + LLD M
Sbjct: 119 NAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLE 178
Query: 237 EGTF---PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGK 293
EG PN FNVL+ A CKK + A ++V M G P+ VTYNT+ +KG+
Sbjct: 179 EGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGE 238
Query: 294 LNKAVS-LLNQMV-ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIY 351
+A S ++ +MV K PN T G +V G+ ++GR DG + ++E N ++
Sbjct: 239 TVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVF 298
Query: 352 SSLISGL--------------------FKE-----GKFEHAMQLWKEMMEKGCEPNTVVY 386
+SLI+G F E G + +Q+ M E + + + Y
Sbjct: 299 NSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITY 358
Query: 387 SALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKN 446
S +++ G ++A + EM G P++ YS L +G+ A + KA + + +
Sbjct: 359 STVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIV 418
Query: 447 NSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQ 506
S N V ++ +I+G C NG + +AM V+ +M G+ ++ + +++ G+ + +
Sbjct: 419 ES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWK 477
Query: 507 GMKLFNQMLCQEAELQPDVATYNILLNAF 535
++ M + ++P+ +T+ +L A+
Sbjct: 478 AEEVLQMM--RGCGVKPENSTFLLLAEAW 504
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 187/419 (44%), Gaps = 33/419 (7%)
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG 238
++ L + G +A VF+ + P +Y+TL+ + + + S++ E++ G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAV 298
T + FN +I+A + G++ A + + M G P TYNTL+ G GK ++
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 299 SLLNQMVANKCV---PNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLI 355
LL+ M+ V PN TF LV + K+ + + V+ +EE G R + Y+++
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 356 SGLFKEGKFEHAMQ--LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKG 413
+ ++G+ A + K +M++ +PN ++ G CREG+ + ++ MK
Sbjct: 231 TCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMR 290
Query: 414 HLPNSFTYSSLMRGFFEA-------------------------GDCHKAILVWKEMKNNS 448
N ++SL+ GF E G+ + V MK +
Sbjct: 291 VEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECN 350
Query: 449 CNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGM 508
+ + YS ++N G + +A V+K+M+ G+K D AYS + G+ A+ +
Sbjct: 351 VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAE 410
Query: 509 KLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
+L ++ E +P+V + +++ + ++ AM V N M G P+ T + +
Sbjct: 411 ELLETLI---VESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 466
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 172/370 (46%), Gaps = 31/370 (8%)
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK 308
L++ L ++G A + ++ G P+ ++Y TL+ + + + S+++++ +
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 309 CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAM 368
+ + F +++ F + G D L+ ++E G Y++LI G GK E +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 369 QLWKEMMEKG---CEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
+L M+E+G PN ++ L+ C++ K +EA E + +M+ G P++ TY+++
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 426 RGFFEAGDCHKA---ILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSR 482
+ + G+ +A ++ MK + + C I++ G C+ G++ + + ++M
Sbjct: 231 TCYVQKGETVRAESEVVEKMVMKEKAKPNGRTC-GIVVGGYCREGRVRDGLRFVRRMKEM 289
Query: 483 GIKLDVVAYSSMIHGFCNA----------------------QLV-DQGMKLFNQMLCQEA 519
++ ++V ++S+I+GF +LV +Q MK+ L +E
Sbjct: 290 RVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKEC 349
Query: 520 ELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQD 579
++ DV TY+ ++NA+ + +A V M+ G PD I K P+
Sbjct: 350 NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYV-RAKEPKK 408
Query: 580 GREFLDELVV 589
E L+ L+V
Sbjct: 409 AEELLETLIV 418
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 181/442 (40%), Gaps = 75/442 (16%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
+S+ +L+ + + S+ ++ ++++ F + A+ ++ E AV +
Sbjct: 81 ISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLK 140
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQ--PNGLTFNLVIKALC 184
M+ E T ++N+++ G R+ E + + N+ PN TFN++++A C
Sbjct: 141 MK-ELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWC 199
Query: 185 KVGLVDQAVEVFRGIHLRNCAPDSYTYSTL------------------------------ 214
K V++A EV + + PD+ TY+T+
Sbjct: 200 KKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPN 259
Query: 215 -------MDGLCKEGRIDEA---VSLLDEMQIEGTFPNPFVFNVLISALCKKGD------ 258
+ G C+EGR+ + V + EM++E N VFN LI+ + D
Sbjct: 260 GRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA---NLVVFNSLINGFVEVMDRDGIDE 316
Query: 259 ---------LIRAAKLVDNMSLKGCV----------PNEVTYNTLVDGLCRKGKLNKAVS 299
+LV N +K V + +TY+T+++ G + KA
Sbjct: 317 VTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQ 376
Query: 300 LLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
+ +MV P+ + L G+V+ +L +L R N I++++ISG
Sbjct: 377 VFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE-SRPNVVIFTTVISGWC 435
Query: 360 KEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSF 419
G + AM+++ +M + G PN + L+ G + +A E L M+ G P +
Sbjct: 436 SNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENS 495
Query: 420 TYSSLMRGFFEAG---DCHKAI 438
T+ L + AG + +KAI
Sbjct: 496 TFLLLAEAWRVAGLTDESNKAI 517
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 141/278 (50%), Gaps = 10/278 (3%)
Query: 319 LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG 378
L++ +++GR + +V +L E GHR + Y++L++ + + ++ + E+ + G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 379 CEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKA- 437
+ +++ ++A+I+ G ++A + L++MK G P + TY++L++G+ AG ++
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 438 --ILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
+ + E N N +++L+ CK K+ EA V K+M G++ D V Y+++
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 496 HGFCN-AQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQ 554
+ + V ++ +M+ +E + +P+ T I++ + ++ + + + M +
Sbjct: 231 TCYVQKGETVRAESEVVEKMVMKE-KAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEM 289
Query: 555 GCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLV 592
+ + + + + + M+ R+ +DE+ + L+
Sbjct: 290 RVEANLVVFNSLINGFVEVMD-----RDGIDEVTLTLL 322
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 103/221 (46%), Gaps = 7/221 (3%)
Query: 352 SSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKN 411
+ L++ L + G+ A ++K + E G P+ + Y+ L+ + + + + E++
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 412 KGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLME 471
G +S +++++ F E+G+ A+ +MK N Y+ LI G GK
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 472 AMMVWKQMLSRG---IKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATY 528
+ + ML G + ++ ++ ++ +C + V++ ++ +M +E ++PD TY
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKM--EECGVRPDTVTY 226
Query: 529 NILLNAFYQQNNISRAMD--VLNIMLDQGCDPDFITCDIFL 567
N + + Q+ RA V +++ + P+ TC I +
Sbjct: 227 NTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVV 267
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 181/392 (46%), Gaps = 7/392 (1%)
Query: 156 ALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLM 215
+L F+ +C + + P ++ N++ AL G +A + F + P+ +
Sbjct: 96 SLWFFRWLCSNYDYTPGPVSLNILFGALLD-GKAVKAAKSF--LDTTGFKPEPTLLEQYV 152
Query: 216 DGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCV 275
L +EG ++EA+ + + ++ G + N ++ K L R +L M
Sbjct: 153 KCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFD 212
Query: 276 PNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASV 335
+ L+ LC G +++ LL Q + P + L+ GF + G + + V
Sbjct: 213 SERI--RCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEV 270
Query: 336 LISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCR 395
L ++ H + YIY +I GL K A ++K + +KG P+ VVY+ +I G C
Sbjct: 271 LHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCE 330
Query: 396 EGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVC 455
+G AR+ EM KG PN F Y+ ++ G F+ G+ + EM N +
Sbjct: 331 KGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLS 390
Query: 456 YSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
+ +I G C +GK EA ++K M G+ + + Y+++I GFC V++G+KL+ ++
Sbjct: 391 CNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKEL- 449
Query: 516 CQEAELQPDVATYNILLNAFYQQNNISRAMDV 547
+ L+P Y L+ ++++ ++++
Sbjct: 450 -KALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 148/309 (47%), Gaps = 4/309 (1%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
E+A+ +++ ++ + +V + NSVL ++ R E + + +S + +
Sbjct: 162 EEAIEVYNVLK-DMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVES---EFDSERIR 217
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
+I+ALC G V + E+ + + P Y Y+ L+ G C+ G +L M
Sbjct: 218 CLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAW 277
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
FP+ +++ +I LC + A + N+ KG P+ V Y T++ G C KG L A
Sbjct: 278 NHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSA 337
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
L +M+ PN+ + ++HG K+G S + + G+ G +++I G
Sbjct: 338 RKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKG 397
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
GK + A +++K M E G PN + Y+ALI G C+E K ++ + E+K G P+
Sbjct: 398 FCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPS 457
Query: 418 SFTYSSLMR 426
Y++L+R
Sbjct: 458 GMAYAALVR 466
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 155/374 (41%), Gaps = 52/374 (13%)
Query: 275 VPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVK----QGRAS 330
P V+ N L L GK KA K P TL+ +VK +G
Sbjct: 110 TPGPVSLNILFGALL-DGKAVKAAKSFLDTTGFKPEP------TLLEQYVKCLSEEGLVE 162
Query: 331 DGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALI 390
+ V L++ G + +S++ G K K + +L KEM+E E ++ LI
Sbjct: 163 EAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVES--EFDSERIRCLI 220
Query: 391 DGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGD--CHKAIL----VWKEM 444
LC G E E L + +G P + Y+ L+ GF E G+ C +L W
Sbjct: 221 RALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAW--- 277
Query: 445 KNNSCNH--NEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQ 502
NH + Y +I GLC N K +EA ++K + +G D V Y++MI GFC
Sbjct: 278 -----NHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKG 332
Query: 503 LVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
+ KL+ +M+ + ++P+ YN++++ +++ IS N ML G ++
Sbjct: 333 WLGSARKLWFEMI--KKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLS 390
Query: 563 CDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIV 622
C+ +K ++ A +I + M + + P A T+ +
Sbjct: 391 CNTMIKGF---------------------CSHGKSDEAFEIFKNMSETGVTPNAITYNAL 429
Query: 623 VQQLCKPRNIRKAI 636
++ CK + K +
Sbjct: 430 IKGFCKENKVEKGL 443
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/515 (21%), Positives = 222/515 (43%), Gaps = 62/515 (12%)
Query: 119 KAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQP------- 171
+A+ F ++ + + V ++ +L++++ F A++F +C+ + +
Sbjct: 95 RAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQF---LCELIELTSKKEEVDV 151
Query: 172 -------------NGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGL 218
+ + F++++K K+GLV++ VFR + + T + L++GL
Sbjct: 152 FRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGL 211
Query: 219 CKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNE 278
K +++ + M G PN + FN+L + C + ++ M +G P+
Sbjct: 212 LKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDL 271
Query: 279 VTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLIS 338
VTYNTLV CR+G+L +A L M + VP+ VT+ +L+ G K GR +
Sbjct: 272 VTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHR 331
Query: 339 LEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGK 398
+ +RG + + Y++LI KEG + + +L EM+ P+ +++G REG+
Sbjct: 332 MVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGR 391
Query: 399 ADEAREYLIEMKN------------------------------------KGHLPNSFTYS 422
A +++E++ +GH TY+
Sbjct: 392 LLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYN 451
Query: 423 SLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSR 482
+L+ +A+++ ++KN + + Y LI LC+ G+ EA + +M
Sbjct: 452 NLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDS 511
Query: 483 GIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQN-NI 541
+K D ++++G+C D+ +L + + P+ +YN L+ A +
Sbjct: 512 EVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPE--SYNSLVKAVCETGCGY 569
Query: 542 SRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNP 576
+A+++ M G P+ +TC ++ L P
Sbjct: 570 KKALELQERMQRLGFVPNRLTCKYLIQVLEQPSLP 604
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 90/190 (47%), Gaps = 23/190 (12%)
Query: 446 NNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVD 505
+ CN + V + +L+ G K G + E V++++L G + VV + +++G L++
Sbjct: 159 TDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLME 218
Query: 506 QGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDI 565
++++ M C+ + P+ T+NIL N F +N D L M ++G +PD +T
Sbjct: 219 DCWQVYSVM-CRVG-IHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVT--- 273
Query: 566 FLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQ 625
+ LV +R R A + ++M R ++P+ T+ +++
Sbjct: 274 ------------------YNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKG 315
Query: 626 LCKPRNIRKA 635
LCK +R+A
Sbjct: 316 LCKDGRVREA 325
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 125/250 (50%)
Query: 165 KSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRI 224
K+ N +P ++N ++ +L V V+ + PD TY+ +M + G+
Sbjct: 214 KTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKT 273
Query: 225 DEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTL 284
D LLDEM +G P+ + +N+L+ L + A L+++M G P + + TL
Sbjct: 274 DRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTL 333
Query: 285 VDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGH 344
+DGL R GKL +++ V C P+ V + ++ G++ G + + E+G
Sbjct: 334 IDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQ 393
Query: 345 RGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE 404
N + Y+S+I G GKF+ A L KEM +GC PN VVYS L++ L GK EA E
Sbjct: 394 LPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHE 453
Query: 405 YLIEMKNKGH 414
+ +M KGH
Sbjct: 454 VVKDMVEKGH 463
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 155/310 (50%), Gaps = 23/310 (7%)
Query: 181 KALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTF 240
KA+C+ L+D+ ++ G C T++ L +C G A ++++ TF
Sbjct: 169 KAMCR--LIDEMIK--DGYPTTAC-----TFNLL---ICTCGEAGLARDVVEQFIKSKTF 216
Query: 241 ---PNPFVFNVLISALCKKGDLIRAAKLVD----NMSLKGCVPNEVTYNTLVDGLCRKGK 293
P +N ++ +L ++ KL+D M G P+ +TYN ++ R GK
Sbjct: 217 NYRPYKHSYNAILHSLLG----VKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGK 272
Query: 294 LNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSS 353
++ LL++MV + P+ T+ L+H + ++L + E G +++
Sbjct: 273 TDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTT 332
Query: 354 LISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKG 413
LI GL + GK E E ++ GC P+ V Y+ +I G G+ ++A E EM KG
Sbjct: 333 LIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKG 392
Query: 414 HLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAM 473
LPN FTY+S++RGF AG +A + KEM++ CN N V YS L+N L GK++EA
Sbjct: 393 QLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAH 452
Query: 474 MVWKQMLSRG 483
V K M+ +G
Sbjct: 453 EVVKDMVEKG 462
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 131/292 (44%), Gaps = 2/292 (0%)
Query: 281 YNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLE 340
Y+ L+ G+ L+++M+ + TF L+ + G A D I +
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 341 ERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
+R ++ Y++++ L +++ ++++M+E G P+ + Y+ ++ R GK D
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTD 274
Query: 401 EAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILI 460
L EM G P+ +TY+ L+ A+ + M+ + ++ LI
Sbjct: 275 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLI 334
Query: 461 NGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAE 520
+GL + GKL + + G DVV Y+ MI G+ + +++ ++F +M E
Sbjct: 335 DGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEM--TEKG 392
Query: 521 LQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRD 572
P+V TYN ++ F A +L M +GC+P+F+ + L++
Sbjct: 393 QLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKN 444
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 9/179 (5%)
Query: 66 DLSFYS-LIEKLAASSDFASLEELLQQMKRERRVFIEK---NFIVIFKAYGKAHFPEKAV 121
DL Y+ L+ LA + + LL M R V +E +F + +A E A
Sbjct: 291 DLYTYNILLHHLATGNKPLAALNLLNHM---REVGVEPGVIHFTTLIDGLSRAGKLE-AC 346
Query: 122 NLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIK 181
F + C V + ++ I G +A E + + + + PN T+N +I+
Sbjct: 347 KYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQL-PNVFTYNSMIR 405
Query: 182 ALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTF 240
C G +A + + + R C P+ YSTL++ L G++ EA ++ +M +G +
Sbjct: 406 GFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHY 464
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 119/235 (50%)
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM 304
+ ++ LCK G+ I A L M KG PN +TYN ++D C G+ + A LL M
Sbjct: 12 ISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHM 71
Query: 305 VANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKF 364
+ + P+ VTF L++ FVK+ + S+ + + Y+S+I G K+ +
Sbjct: 72 IEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRV 131
Query: 365 EHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSL 424
+ A ++ M KGC P+ V +S LI+G C+ + D E EM +G + N+ TY++L
Sbjct: 132 DDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 191
Query: 425 MRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM 479
+ GF + GD A + EM + + + + ++ GLC +L +A + + +
Sbjct: 192 IHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 132/247 (53%)
Query: 207 DSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV 266
D + ++D LCK+G A +L EM +G FPN +N +I + C G A +L+
Sbjct: 9 DVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLL 68
Query: 267 DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQ 326
+M K P+ VT++ L++ ++ K+++A + +M+ P +T+ +++ GF KQ
Sbjct: 69 RHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQ 128
Query: 327 GRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVY 386
R D +L S+ +G + +S+LI+G K + ++ M+++ EM +G NTV Y
Sbjct: 129 DRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 188
Query: 387 SALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKN 446
+ LI G C+ G D A++ L EM + G P+ T+ ++ G + KA + ++++
Sbjct: 189 TTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Query: 447 NSCNHNE 453
+ +H E
Sbjct: 249 SEDHHLE 255
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 124/243 (51%)
Query: 168 NIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEA 227
+I+ + + ++ LCK G A +F +H + P+ TY+ ++D C GR +A
Sbjct: 5 HIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDA 64
Query: 228 VSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDG 287
LL M + P+ F+ LI+A K+ + A ++ M P +TYN+++DG
Sbjct: 65 DQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDG 124
Query: 288 LCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGN 347
C++ +++ A +L+ M + C P+ VTF TL++G+ K R +G + + RG N
Sbjct: 125 FCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 184
Query: 348 EYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLI 407
Y++LI G + G + A L EM+ G P+ + + ++ GLC + + +A L
Sbjct: 185 TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILE 244
Query: 408 EMK 410
+++
Sbjct: 245 DLQ 247
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 120/218 (55%), Gaps = 2/218 (0%)
Query: 345 RGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE 404
+ + I ++++ L K+G +A L+ EM EKG PN + Y+ +ID C G+ +A +
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 405 YLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLC 464
L M K P+ T+S+L+ F + +A ++KEM S + Y+ +I+G C
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 465 KNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPD 524
K ++ +A + M S+G DVV +S++I+G+C A+ VD GM++F +M + +
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM--HRRGIVAN 184
Query: 525 VATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
TY L++ F Q ++ A D+LN M+ G PD+IT
Sbjct: 185 TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT 222
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 121/236 (51%)
Query: 279 VTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLIS 338
V +VD LC+ G A +L +M PN +T+ ++ F GR SD +L
Sbjct: 11 VISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRH 70
Query: 339 LEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGK 398
+ E+ + +S+LI+ KE K A +++KEM+ P T+ Y+++IDG C++ +
Sbjct: 71 MIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDR 130
Query: 399 ADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSI 458
D+A+ L M +KG P+ T+S+L+ G+ +A + ++ EM N V Y+
Sbjct: 131 VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 190
Query: 459 LINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
LI+G C+ G L A + +M+S G+ D + + M+ G C+ + + + + +
Sbjct: 191 LIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 117/240 (48%), Gaps = 3/240 (1%)
Query: 310 VPNDVTFGT-LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAM 368
+ DV T +V K G + ++ + E+G N Y+ +I G++ A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 369 QLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGF 428
QL + M+EK P+ V +SALI+ +E K EA E EM P + TY+S++ GF
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
+ A + M + C+ + V +S LING CK ++ M ++ +M RGI +
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 489 VAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL 548
V Y+++IHGFC +D L N+M+ + PD T++ +L + + +A +L
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMI--SCGVAPDYITFHCMLAGLCSKKELRKAFAIL 243
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 124/243 (51%), Gaps = 1/243 (0%)
Query: 132 HCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQ 191
H K V ++++ + ++G+ A ++ + + I PN LT+N +I + C G
Sbjct: 5 HIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEK-GIFPNVLTYNCMIDSFCHSGRWSD 63
Query: 192 AVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLIS 251
A ++ R + + PD T+S L++ KE ++ EA + EM FP +N +I
Sbjct: 64 ADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMID 123
Query: 252 ALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVP 311
CK+ + A +++D+M+ KGC P+ VT++TL++G C+ +++ + + +M V
Sbjct: 124 GFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA 183
Query: 312 NDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLW 371
N VT+ TL+HGF + G +L + G + + +++GL + + A +
Sbjct: 184 NTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAIL 243
Query: 372 KEM 374
+++
Sbjct: 244 EDL 246
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 116/264 (43%), Gaps = 23/264 (8%)
Query: 374 MMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGD 433
M + + + V+ +A++D LC++G A+ EM KG PN TY+ ++ F +G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 434 CHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSS 493
A + + M N + V +S LIN K K+ EA ++K+ML I + Y+S
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 494 MIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLD 553
MI GFC VD ++ + M + PDV T++ L+N + + + M++ M
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGC--SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 178
Query: 554 QGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLL 613
+G + +T L+ + A ++ M+ +
Sbjct: 179 RGIVANTVT---------------------YTTLIHGFCQVGDLDAAQDLLNEMISCGVA 217
Query: 614 PEASTWAIVVQQLCKPRNIRKAIS 637
P+ T+ ++ LC + +RKA +
Sbjct: 218 PDYITFHCMLAGLCSKKELRKAFA 241
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 153/323 (47%), Gaps = 39/323 (12%)
Query: 136 TVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEV 195
T+ + + V+ + + G +++A++ + + KS ++ + + N ++ AL K ++ A EV
Sbjct: 202 TLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEV 261
Query: 196 FRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCK 255
F + PD+ T++ L+ G CK + D+A +++D M++ P+ + + A CK
Sbjct: 262 FLKL-FDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCK 320
Query: 256 KGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVT 315
+GD R ++++ M GC PN VTY ++ L + ++ +A+ + +M + CVP+
Sbjct: 321 EGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKF 380
Query: 316 FGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM 375
+ +L+H K GR D A + + +G R + +Y+++IS + E A++L K M
Sbjct: 381 YSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRME 440
Query: 376 E---KGCEPNTVVYSA-----------------------------------LIDGLCREG 397
+ + C PN Y+ LI GLC G
Sbjct: 441 DEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSG 500
Query: 398 KADEAREYLIEMKNKGHLPNSFT 420
K +EA + E KG +P T
Sbjct: 501 KVEEACLFFEEAVRKGMVPRDST 523
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 146/300 (48%), Gaps = 11/300 (3%)
Query: 270 SLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVAN---KCVPNDVTFGTLVHGFVKQ 326
S G V + TYN +VD L + + L+N+M N K V D T ++ K
Sbjct: 158 SQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLD-TMSKVMRRLAKS 216
Query: 327 GRASDGASVLISLEER-GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVV 385
G+ + + +E+ G + + +SL+ L KE EHA +++ ++ + +P+
Sbjct: 217 GKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDART 275
Query: 386 YSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMK 445
++ LI G C+ K D+AR + MK P+ TY+S + + + GD + + +EM+
Sbjct: 276 FNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMR 335
Query: 446 NNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVD 505
N CN N V Y+I+++ L K+ ++ EA+ V+++M G D YSS+IH
Sbjct: 336 ENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFK 395
Query: 506 QGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLD---QGCDPDFIT 562
++F M Q ++ DV YN +++A + A+ +L M D + C P+ T
Sbjct: 396 DAAEIFEDMTNQ--GVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVET 453
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 145/295 (49%), Gaps = 11/295 (3%)
Query: 245 VFNVLISAL--CKKGDLIRAAKLVDNMSLKGCVPNEVTYNTL---VDGLCRKGKLNKAVS 299
+N ++ L C+ DL+ +LV+ M+ K VT +T+ + L + GK NKAV
Sbjct: 168 TYNAMVDVLGKCRNFDLM--WELVNEMN-KNEESKLVTLDTMSKVMRRLAKSGKYNKAVD 224
Query: 300 LLNQMVANKCVPND-VTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGL 358
+M + V D + +L+ VK+ V + L + + + ++ LI G
Sbjct: 225 AFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGF 283
Query: 359 FKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNS 418
K KF+ A + M P+ V Y++ ++ C+EG E L EM+ G PN
Sbjct: 284 CKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNV 343
Query: 419 FTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQ 478
TY+ +M ++ +A+ V+++MK + C + YS LI+ L K G+ +A +++
Sbjct: 344 VTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFED 403
Query: 479 MLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAEL-QPDVATYNILL 532
M ++G++ DV+ Y++MI + + ++L +M +E E P+V TY LL
Sbjct: 404 MTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLL 458
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 157/338 (46%), Gaps = 15/338 (4%)
Query: 210 TYSTLMDGLCKEGRIDEAVSLLDEMQIE-GTFPNPFVFNVLISALCKKGDLIRA----AK 264
T S +M L K G+ ++AV EM+ G + N L+ AL K+ + A K
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK 264
Query: 265 LVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFV 324
L D + P+ T+N L+ G C+ K + A ++++ M + P+ VT+ + V +
Sbjct: 265 LFDTIK-----PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYC 319
Query: 325 KQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTV 384
K+G +L + E G N Y+ ++ L K + A+ ++++M E GC P+
Sbjct: 320 KEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAK 379
Query: 385 VYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEM 444
YS+LI L + G+ +A E +M N+G + Y++++ A+ + K M
Sbjct: 380 FYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRM 439
Query: 445 KNN---SCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNA 501
++ SC+ N Y+ L+ C K+ ++ M+ + +DV Y +I G C +
Sbjct: 440 EDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMS 499
Query: 502 QLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQN 539
V++ F + + + P +T +L++ ++N
Sbjct: 500 GKVEEACLFFEEAV--RKGMVPRDSTCKMLVDELEKKN 535
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 104/229 (45%), Gaps = 5/229 (2%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
+++ S +E DF + E+L++M+ + ++ + GK+ +A+ ++ +
Sbjct: 309 VTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEK 368
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
M+ E C K ++S+++++ + G F A E + + ++ + L +N +I A
Sbjct: 369 MK-EDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQ-GVRRDVLVYNTMISAALHH 426
Query: 187 GLVDQAVEVFRGIHL---RNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNP 243
+ A+ + + + +C+P+ TY+ L+ C + ++ LL M +
Sbjct: 427 SRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDV 486
Query: 244 FVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKG 292
+ +LI LC G + A + KG VP + T LVD L +K
Sbjct: 487 STYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKN 535
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 174/386 (45%), Gaps = 4/386 (1%)
Query: 176 FNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGR-IDEAVSLLDEM 234
+N I L D A EV+ + N PD+ T + L+ L K GR E + ++M
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 235 QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKL 294
+G + VF L+ + C +G A + M KG N + YNTL+D + +
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 295 NKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSL 354
+ L +M P+ T+ L+ + ++ + ++L +E+ G N Y+ L
Sbjct: 396 EEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCL 455
Query: 355 ISGLFKEGKF-EHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKG 413
IS + K + A + M + G +P++ Y+ALI G ++A EM +G
Sbjct: 456 ISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEG 515
Query: 414 HLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAM 473
P+ TY+S++ F +GD K + +WK M + Y+ L++G K G +EA
Sbjct: 516 IKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEAR 575
Query: 474 MVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLN 533
V + G++ V+ Y+ +++ + + +L +M L+PD TY+ ++
Sbjct: 576 DVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAA--LNLKPDSITYSTMIY 633
Query: 534 AFYQQNNISRAMDVLNIMLDQGCDPD 559
AF + + RA +M+ G PD
Sbjct: 634 AFVRVRDFKRAFFYHKMMVKSGQVPD 659
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 191/400 (47%), Gaps = 11/400 (2%)
Query: 137 VKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAV-EV 195
V+ +N+ ++ + + A E Y + K +N+ P+ +T ++I L K G + V E+
Sbjct: 273 VRLYNAAISGLSASQRYDDAWEVYEAMDK-INVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 196 FRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCK 255
F + + + L+ C EG +EA+ + EM+ +G N V+N L+ A K
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 256 KGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVT 315
+ L M KG P+ TYN L+D R+ + + +LL +M PN +
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 316 FGTLVHGFVKQGRASD-GASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEM 374
+ L+ + + + SD A + +++ G + + + Y++LI G E A ++EM
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511
Query: 375 MEKGCEPNTVVYSALIDGLCREG---KADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEA 431
++G +P+ Y++++D R G K E + ++ K KG TY++L+ GF +
Sbjct: 512 CKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKG---TRITYNTLLDGFAKQ 568
Query: 432 GDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAY 491
G +A V E + + Y++L+N + G+ + + K+M + +K D + Y
Sbjct: 569 GLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITY 628
Query: 492 SSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNIL 531
S+MI+ F + + +++M+ + ++ PD +Y L
Sbjct: 629 STMIYAFVRVRDFKRAF-FYHKMMVKSGQV-PDPRSYEKL 666
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 170/374 (45%), Gaps = 19/374 (5%)
Query: 194 EVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISAL 253
E FR + L N A + GL R D+A + + M +P+ +LI+ L
Sbjct: 268 EEFRDVRLYNAA---------ISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTL 318
Query: 254 CKKGDLIRAAKLV----DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC 309
K G R+AK V + MS KG ++ + LV C +G +A+ + +M
Sbjct: 319 RKAG---RSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGI 375
Query: 310 VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
N + + TL+ + K + + + ++G + + Y+ L+ + + +
Sbjct: 376 RSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVET 435
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGK-ADEAREYLIEMKNKGHLPNSFTYSSLMRGF 428
L +EM + G EPN Y+ LI R K +D A + + MK G P+S +Y++L+ +
Sbjct: 436 LLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAY 495
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
+G KA ++EM + Y+ +++ ++G + M +WK ML IK
Sbjct: 496 SVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTR 555
Query: 489 VAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL 548
+ Y++++ GF L + + ++ + LQP V TYN+L+NA+ + ++ +L
Sbjct: 556 ITYNTLLDGFAKQGLYIEARDVVSEF--SKMGLQPSVMTYNMLMNAYARGGQDAKLPQLL 613
Query: 549 NIMLDQGCDPDFIT 562
M PD IT
Sbjct: 614 KEMAALNLKPDSIT 627
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 163/362 (45%), Gaps = 12/362 (3%)
Query: 212 STLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSL 271
S L L +E D + LL + + F + ++N IS L A ++ + M
Sbjct: 242 SVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDK 301
Query: 272 KGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCV--PNDVTFGTLVHGFVKQGRA 329
P+ VT L+ L + G+ K V + + ++ K V DV FG LV F +G
Sbjct: 302 INVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDV-FGGLVKSFCDEGLK 360
Query: 330 SDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSAL 389
+ + +E++G R N +Y++L+ K E L+ EM +KG +P+ Y+ L
Sbjct: 361 EEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNIL 420
Query: 390 IDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHK----AILVWKEMK 445
+D R + D L EM++ G PN +Y+ L+ + G K A + MK
Sbjct: 421 MDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAY---GRTKKMSDMAADAFLRMK 477
Query: 446 NNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVD 505
+ Y+ LI+ +G +A +++M GIK V Y+S++ F +
Sbjct: 478 KVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTG 537
Query: 506 QGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDI 565
+ M+++ ML ++ ++ TYN LL+ F +Q A DV++ G P +T ++
Sbjct: 538 KLMEIWKLMLREK--IKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNM 595
Query: 566 FL 567
+
Sbjct: 596 LM 597
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 154/333 (46%), Gaps = 4/333 (1%)
Query: 237 EGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNK 296
E + +P +VL + L ++ L+ N+ K + YN + GL + +
Sbjct: 232 EPSLASPRACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDD 291
Query: 297 AVSLLNQMVANKCVPNDVTFGTLVHGFVKQGR-ASDGASVLISLEERGHRGNEYIYSSLI 355
A + M P++VT L+ K GR A + + + E+G + ++ ++ L+
Sbjct: 292 AWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLV 351
Query: 356 SGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL 415
EG E A+ + EM +KG NT+VY+ L+D + +E EM++KG
Sbjct: 352 KSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLK 411
Query: 416 PNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLME-AMM 474
P++ TY+ LM + + +EM++ N Y+ LI+ + K+ + A
Sbjct: 412 PSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAAD 471
Query: 475 VWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNA 534
+ +M G+K +Y+++IH + + ++ F +M C+E ++P V TY +L+A
Sbjct: 472 AFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM-CKEG-IKPSVETYTSVLDA 529
Query: 535 FYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
F + + + M++ +ML + IT + L
Sbjct: 530 FRRSGDTGKLMEIWKLMLREKIKGTRITYNTLL 562
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 146/339 (43%), Gaps = 3/339 (0%)
Query: 87 ELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNV 146
E+ ++M + + + F + K++ E+A+ + ME + T+ +N++++
Sbjct: 330 EIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTI-VYNTLMDA 388
Query: 147 IIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAP 206
+ H ++ + + ++P+ T+N+++ A + D + R + P
Sbjct: 389 YNKSNHIEEVEGLFTEM-RDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEP 447
Query: 207 DSYTYSTLMDGLCKEGRI-DEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKL 265
+ +Y+ L+ + ++ D A M+ G P+ + LI A G +A
Sbjct: 448 NVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYAS 507
Query: 266 VDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVK 325
+ M +G P+ TY +++D R G K + + M+ K +T+ TL+ GF K
Sbjct: 508 FEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAK 567
Query: 326 QGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVV 385
QG + V+ + G + + Y+ L++ + G+ QL KEM +P+++
Sbjct: 568 QGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSIT 627
Query: 386 YSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSL 424
YS +I R A Y M G +P+ +Y L
Sbjct: 628 YSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 85/191 (44%), Gaps = 3/191 (1%)
Query: 387 SALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKN 446
S L L RE AD L + +K + Y++ + G + A V++ M
Sbjct: 242 SVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDK 301
Query: 447 NSCNHNEVCYSILINGLCKNGK-LMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVD 505
+ + V +ILI L K G+ E ++++M +G+K + ++ FC+ L +
Sbjct: 302 INVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKE 361
Query: 506 QGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDI 565
+ + + +M ++ ++ + YN L++A+ + N+I + M D+G P T +I
Sbjct: 362 EALVIQTEM--EKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNI 419
Query: 566 FLKTLRDNMNP 576
+ M P
Sbjct: 420 LMDAYARRMQP 430
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 176/390 (45%), Gaps = 9/390 (2%)
Query: 51 IFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRE---RRVFIEKNFIVI 107
+FK K G + L F S++ L + +F L+ R + FIV+
Sbjct: 121 VFKWAEMKPG-FTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVL 179
Query: 108 FKAYGKAHFPEKAVNLFHRMEA-EFHCKQT--VKSFNSVLNVIIQEGHFHRALEFYSHVC 164
+ Y +A ++A+ F + E CK ++ +L+ + +EGH A + +
Sbjct: 180 IRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIG 239
Query: 165 KSL--NIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEG 222
++ N P+ FN+++ + + QA +++ + N P TY TL++G C+
Sbjct: 240 GTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMR 299
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
R+ A+ +L+EM++ N VFN +I L + G L A +++ + P VTYN
Sbjct: 300 RVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYN 359
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER 342
+LV C+ G L A +L M+ P T+ F K + +G ++ L E
Sbjct: 360 SLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEA 419
Query: 343 GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
GH + Y ++ L ++GK AMQ+ KEM +G +P+ + + LI LCR +EA
Sbjct: 420 GHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEA 479
Query: 403 REYLIEMKNKGHLPNSFTYSSLMRGFFEAG 432
E +G +P T+ + G G
Sbjct: 480 FEEFDNAVRRGIIPQYITFKMIDNGLRSKG 509
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 165/368 (44%), Gaps = 38/368 (10%)
Query: 175 TFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYT----YSTLMDGLCKEGRIDEAVSL 230
TF ++I+ + G+V QA+ F S T L+D LCKEG + EA
Sbjct: 175 TFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMY 234
Query: 231 LDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCR 290
L+ +I GT + +V +V I +N L++G R
Sbjct: 235 LE--RIGGTMDSNWVPSVRI------------------------------FNILLNGWFR 262
Query: 291 KGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYI 350
KL +A L +M A P VT+GTL+ G+ + R VL ++ N +
Sbjct: 263 SRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMV 322
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
++ +I GL + G+ A+ + + P V Y++L+ C+ G A + L M
Sbjct: 323 FNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMM 382
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
+G P + TY+ + F + + + ++ ++ + + + Y +++ LC++GKL
Sbjct: 383 TRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLS 442
Query: 471 EAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNI 530
AM V K+M +RGI D++ + +IH C +++++ + F+ + + + P T+ +
Sbjct: 443 LAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRR--GIIPQYITFKM 500
Query: 531 LLNAFYQQ 538
+ N +
Sbjct: 501 IDNGLRSK 508
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 153/342 (44%), Gaps = 18/342 (5%)
Query: 242 NPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNT---LVDGLCRKGKLNKAV 298
+P +F+ ++++LCK + A LV + N V+ +T L+ R G + +A+
Sbjct: 134 SPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAI 193
Query: 299 SLLNQMVANKCVPNDVT----FGTLVHGFVKQGRASDGASVLISLEERGHRGNE------ 348
+ + V T L+ K+G + + + LE G +
Sbjct: 194 RAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREAS---MYLERIGGTMDSNWVPSV 250
Query: 349 YIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIE 408
I++ L++G F+ K + A +LW+EM +P V Y LI+G CR + A E L E
Sbjct: 251 RIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEE 310
Query: 409 MKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGK 468
MK N ++ ++ G EAG +A+ + + V Y+ L+ CK G
Sbjct: 311 MKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGD 370
Query: 469 LMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATY 528
L A + K M++RG+ Y+ F ++GM L+ +++ EA PD TY
Sbjct: 371 LPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLI--EAGHSPDRLTY 428
Query: 529 NILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
+++L + +S AM V M ++G DPD +T + + L
Sbjct: 429 HLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLL 470
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 153/378 (40%), Gaps = 65/378 (17%)
Query: 250 ISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC 309
IS L + D++ + L + G P+ + L D L L +V +M
Sbjct: 73 ISNLLENTDVVPGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFT 132
Query: 310 VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSS----LISGLFKEGKFE 365
+ + F ++V+ K R + A L+ R G+ + + LI + G +
Sbjct: 133 LSPSL-FDSVVNSLCK-AREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQ 190
Query: 366 HAMQLWK--EMMEKGCEPNT--VVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTY 421
A++ ++ E C+ T + L+D LC+EG EA YL + G + +++
Sbjct: 191 QAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIG--GTMDSNWVP 248
Query: 422 SSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLS 481
S + ++IL+NG ++ KL +A +W++M +
Sbjct: 249 SVRI------------------------------FNILLNGWFRSRKLKQAEKLWEEMKA 278
Query: 482 RGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNI 541
+K VV Y ++I G+C + V M++ +M + AE++ + +N +++ + +
Sbjct: 279 MNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEM--KMAEMEINFMVFNPIIDGLGEAGRL 336
Query: 542 SRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGAS 601
S A+ ++ P +T + LV K GAS
Sbjct: 337 SEALGMMERFFVCESGPTIVT---------------------YNSLVKNFCKAGDLPGAS 375
Query: 602 KIIEVMLDRCLLPEASTW 619
KI+++M+ R + P +T+
Sbjct: 376 KILKMMMTRGVDPTTTTY 393
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 157/320 (49%), Gaps = 15/320 (4%)
Query: 103 NFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSH 162
F ++FK Y AH ++A++ + +++ +F+ + SF ++++ + + H A E
Sbjct: 119 TFRIVFKRYVTAHLVQEAIDAYDKLD-DFNLRDET-SFYNLVDALCEHKHVVEAEE---- 172
Query: 163 VCKSLNIQPNGLTF------NLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMD 216
+C N+ NG + NL+++ K+G + E ++ + D ++YS MD
Sbjct: 173 LCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMD 232
Query: 217 GLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVP 276
+CK G+ +AV L EM+ + +N +I A+ + ++ M +GC P
Sbjct: 233 IMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEP 292
Query: 277 NEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVL 336
N T+NT++ LC G++ A +L++M C P+ +T+ L F + + S+ S+
Sbjct: 293 NVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLF 349
Query: 337 ISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCRE 396
+ G R Y L+ + G + + +WK M E G P++ Y+A+ID L ++
Sbjct: 350 GRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQK 409
Query: 397 GKADEAREYLIEMKNKGHLP 416
G D AREY EM +G P
Sbjct: 410 GMLDMAREYEEEMIERGLSP 429
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 168/370 (45%), Gaps = 7/370 (1%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+KA+ F+ +E E + T ++FN V++++ + F + + + + PN +TF
Sbjct: 62 QKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFR 121
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
+V K LV +A++ + + N D ++ L+D LC+ + EA L +
Sbjct: 122 IVFKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEHKHVVEAEELCFGKNVI 180
Query: 238 G---TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKL 294
G + N + N+++ K G + + M +G + +Y+ +D +C+ GK
Sbjct: 181 GNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKP 240
Query: 295 NKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSL 354
KAV L +M + + + V + T++ G V + ERG N ++++
Sbjct: 241 WKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTI 300
Query: 355 ISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGH 414
I L ++G+ A ++ EM ++GC+P+++ Y L R K E M G
Sbjct: 301 IKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLFGRMIRSGV 357
Query: 415 LPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMM 474
P TY LMR F G + VWK MK + + Y+ +I+ L + G L A
Sbjct: 358 RPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMARE 417
Query: 475 VWKQMLSRGI 484
++M+ RG+
Sbjct: 418 YEEEMIERGL 427
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 162/378 (42%), Gaps = 59/378 (15%)
Query: 280 TYNTLVDGLCRKGKLNKAVSLLNQMVAN-KCVPNDVTFGTLVHGFVKQGRASDGASVLIS 338
T+N ++D L + + + +L+N+M+ N + VPN VTF + +V +
Sbjct: 83 TFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDK 142
Query: 339 LEERGHR-------------------------------------GNEYIYSSLISGLFKE 361
L++ R N I++ ++ G K
Sbjct: 143 LDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKL 202
Query: 362 GKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTY 421
G + + WK+M +G + YS +D +C+ GK +A + EMK++ + Y
Sbjct: 203 GWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAY 262
Query: 422 SSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLS 481
++++R + I V++EM+ C N ++ +I LC++G++ +A + +M
Sbjct: 263 NTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPK 322
Query: 482 RGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNI 541
RG + D + Y + F + + + LF +M+ + ++P + TY +L+ F + +
Sbjct: 323 RGCQPDSITYMCL---FSRLEKPSEILSLFGRMI--RSGVRPKMDTYVMLMRKFERWGFL 377
Query: 542 SRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDG-----REFLDELVVR-LVKRQ 595
+ V M + G PD + + L Q G RE+ +E++ R L R+
Sbjct: 378 QPVLYVWKTMKESGDTPDSAAYNAVIDAL------IQKGMLDMAREYEEEMIERGLSPRR 431
Query: 596 RTIGASKIIEVMLDRCLL 613
R +++E LD L+
Sbjct: 432 R----PELVEKSLDETLV 445
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 199/449 (44%), Gaps = 43/449 (9%)
Query: 147 IIQEGH-FHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCA 205
I GH + +A+E Y+ + S PN N+++ K+ +V+ A+E+F GI RN
Sbjct: 117 IFWRGHIYDKAIEVYTGM-SSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNF- 174
Query: 206 PDSYTYSTLMDGLCKEGRIDEAVSL---LDEMQIEGTFPNPFVFNVLISALCKKGDLIRA 262
+++ + C G + V + L M EG +PN F ++ C+ G + A
Sbjct: 175 ---FSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEA 231
Query: 263 AKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHG 322
++V M G + ++ LV G R G+ KAV L N+M+ C PN VT+ +L+ G
Sbjct: 232 FQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKG 291
Query: 323 FVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPN 382
FV G + +VL ++ G + + + +I + G+FE A +++ + ++ P+
Sbjct: 292 FVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPD 351
Query: 383 TVVYSALIDGLCREGKAD--------------------------------EAREYLIEMK 410
+++++ LC GK D A + L M
Sbjct: 352 QYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMS 411
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
K + +TY+ + G AI ++K + + + +S +I+ L + GK
Sbjct: 412 YKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYN 471
Query: 471 EAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNI 530
A+ ++K+ + LDVV+Y+ I G A+ +++ L M +E + P+ TY
Sbjct: 472 TAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDM--KEGGIYPNRRTYRT 529
Query: 531 LLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
+++ ++ + +L + +G + D
Sbjct: 530 IISGLCKEKETEKVRKILRECIQEGVELD 558
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/491 (21%), Positives = 222/491 (45%), Gaps = 47/491 (9%)
Query: 72 LIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEF 131
++EKL + ++ S++ +++++K + F+++ + + + H +KA+ ++ M + F
Sbjct: 81 VVEKL--TREYYSIDRIIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSS-F 137
Query: 132 HCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVG---- 187
++ N +++V + + ALE + + N +F++ + C G
Sbjct: 138 GFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFR-----NFFSFDIALSHFCSRGGRGD 192
Query: 188 LVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFN 247
LV + + R I P+ + ++ C+ G + EA ++ M G + V++
Sbjct: 193 LVGVKIVLKRMIG-EGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWS 251
Query: 248 VLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVAN 307
+L+S + G+ +A L + M GC PN VTY +L+ G G +++A ++L+++ +
Sbjct: 252 MLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSE 311
Query: 308 KCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE-- 365
P+ V ++H + + GR + V SLE+R ++Y ++S++S L GKF+
Sbjct: 312 GLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLV 371
Query: 366 ------------------------------HAMQLWKEMMEKGCEPNTVVYSALIDGLCR 395
+A+++ M K + Y+ + LCR
Sbjct: 372 PRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCR 431
Query: 396 EGKADEA-REYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEV 454
G A + Y I +K K HL F +S+++ E G + A+ ++K + V
Sbjct: 432 GGAPRAAIKMYKIIIKEKKHLDAHF-HSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVV 490
Query: 455 CYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
Y++ I GL + ++ EA + M GI + Y ++I G C + ++ K+ +
Sbjct: 491 SYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILREC 550
Query: 515 LCQEAELQPDV 525
+ + EL P+
Sbjct: 551 IQEGVELDPNT 561
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 184/429 (42%), Gaps = 30/429 (6%)
Query: 230 LLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
+++ ++I G P VF +L+ + +A ++ MS G VPN N ++D
Sbjct: 95 IIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNF 154
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEE---RGHRG 346
+ +N A+ + + N +F + F +G D V I L+ G
Sbjct: 155 KLNVVNGALEIFEGIRFR----NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYP 210
Query: 347 NEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYL 406
N + ++ + G A Q+ M+ G + V+S L+ G R G+ +A +
Sbjct: 211 NRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLF 270
Query: 407 IEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKN 466
+M G PN TY+SL++GF + G +A V ++++ + V +++I+ +
Sbjct: 271 NKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRL 330
Query: 467 GKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVA 526
G+ EA V+ + R + D ++S++ C + D ++ + + D+
Sbjct: 331 GRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI-----GTDFDLV 385
Query: 527 TYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDE 586
T N+L N F + S A+ VL+IM + D T ++L L P + + +
Sbjct: 386 TGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMY--K 443
Query: 587 LVVRLVKRQRTIGASKIIEVMLD------------RCLLP----EASTWAIVVQQLCKPR 630
++++ K S II+ +++ RC+L + ++ + ++ L + +
Sbjct: 444 IIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAK 503
Query: 631 NIRKAISEC 639
I +A S C
Sbjct: 504 RIEEAYSLC 512
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 43/255 (16%)
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRG 198
+F S+L+ + G F + + + + +T NL+ K+G A++V
Sbjct: 354 TFASILSSLCLSGKF----DLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSI 409
Query: 199 IHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGD 258
+ ++ A D YTY+ + LC+ G A+ +
Sbjct: 410 MSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYK-------------------------I 444
Query: 259 LIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
+I+ K +D ++ ++D L GK N AV L + + K + V++
Sbjct: 445 IIKEKKHLDAH----------FHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTV 494
Query: 319 LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG 378
+ G V+ R + S+ ++E G N Y ++ISGL KE + E ++ +E +++G
Sbjct: 495 AIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEG 554
Query: 379 CE--PNT--VVYSAL 389
E PNT VYS L
Sbjct: 555 VELDPNTKFQVYSLL 569
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 163/373 (43%), Gaps = 38/373 (10%)
Query: 61 SYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKA 120
SY + + L + LA+ + S+ ++L+QMK + I + YGK
Sbjct: 106 SYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGK------- 158
Query: 121 VNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVI 180
GH +A+E ++ V K+L Q +N ++
Sbjct: 159 -----------------------------NGHVDQAVELFNGVPKTLGCQQTVDVYNSLL 189
Query: 181 KALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTF 240
ALC V + A + R + + PD TY+ L++G C G++ EA LDEM G
Sbjct: 190 HALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFN 249
Query: 241 PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSL 300
P ++LI L G L A ++V M+ G VP+ T+N L++ + + G++ + +
Sbjct: 250 PPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEM 309
Query: 301 LNQMVA-NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
CV D T+ TL+ K G+ + +L + E GH+ +Y+ +I G+
Sbjct: 310 YYTACKLGLCVDID-TYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMC 368
Query: 360 KEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSF 419
+ G F+ A + +M K PN VY+ LI R GK +A YL+EM G +P S
Sbjct: 369 RNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISR 428
Query: 420 TYSSLMRGFFEAG 432
+ + G G
Sbjct: 429 CFDMVTDGLKNGG 441
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 140/347 (40%), Gaps = 36/347 (10%)
Query: 165 KSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGI-HLRNCAPDSYTYSTLMDGLCKEGR 223
K L++ +G T +I+ K G VDQAVE+F G+ C Y++L+ LC
Sbjct: 138 KDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKM 197
Query: 224 IDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNT 283
A +L+ M +G P+ + +L++ C G + A + +D MS +G P +
Sbjct: 198 FHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDL 257
Query: 284 LVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERG 343
L++GL G L A ++++M VP+ TF L
Sbjct: 258 LIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNIL------------------------ 293
Query: 344 HRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAR 403
I + K G+ E ++++ + G + Y LI + + GK DEA
Sbjct: 294 -----------IEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAF 342
Query: 404 EYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGL 463
L GH P Y+ +++G G A + +MK + N Y++LI
Sbjct: 343 RLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMC 402
Query: 464 CKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKL 510
+ GK ++A +M G+ + + G N D M++
Sbjct: 403 GRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 129/320 (40%), Gaps = 11/320 (3%)
Query: 244 FVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQ 303
FVF VL + D +R S P + Y L L K +L Q
Sbjct: 79 FVFRVLRATSRSSNDSLRFFNWA--RSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQ 136
Query: 304 MVANKCVPNDVTFGTL---VHGFVKQGRASDGASVLISLEER-GHRGNEYIYSSLISGLF 359
M K + D++ TL + + K G + + + G + +Y+SL+ L
Sbjct: 137 M---KDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALC 193
Query: 360 KEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSF 419
F A L + M+ KG +P+ Y+ L++G C GK EA+E+L EM +G P +
Sbjct: 194 DVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPAR 253
Query: 420 TYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM 479
L+ G AG A + +M + ++ILI + K+G++ + ++
Sbjct: 254 GRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTA 313
Query: 480 LSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQN 539
G+ +D+ Y ++I +D+ +L N C E +P + Y ++ +
Sbjct: 314 CKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNN--CVEDGHKPFPSLYAPIIKGMCRNG 371
Query: 540 NISRAMDVLNIMLDQGCDPD 559
A + M + P+
Sbjct: 372 MFDDAFSFFSDMKVKAHPPN 391
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 9/218 (4%)
Query: 130 EFHCKQTVKSFNS-------VLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKA 182
EF + + + FN ++ ++ G+ A E S + K P+ TFN++I+A
Sbjct: 238 EFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKG-GFVPDIQTFNILIEA 296
Query: 183 LCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPN 242
+ K G V+ +E++ D TY TL+ + K G+IDEA LL+ +G P
Sbjct: 297 ISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPF 356
Query: 243 PFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLN 302
P ++ +I +C+ G A +M +K PN Y L+ R GK A + L
Sbjct: 357 PSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLV 416
Query: 303 QMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLE 340
+M VP F + G +K G D A + LE
Sbjct: 417 EMTEMGLVPISRCFDMVTDG-LKNGGKHDLAMRIEQLE 453
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 117/281 (41%), Gaps = 13/281 (4%)
Query: 284 LVDGLCRKGKLNKAVSLLNQMVAN-KCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER 342
+++ + G +++AV L N + C + +L+H +++ + +
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK 211
Query: 343 GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
G + ++ Y+ L++G GK + A + EM +G P LI+GL G + A
Sbjct: 212 GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESA 271
Query: 403 REYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVC-----YS 457
+E + +M G +P+ T++ L+ ++G+ I EM +C +C Y
Sbjct: 272 KEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCI----EMYYTACKLG-LCVDIDTYK 326
Query: 458 ILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQ 517
LI + K GK+ EA + + G K Y+ +I G C + D F+ M +
Sbjct: 327 TLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVK 386
Query: 518 EAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDP 558
P+ Y +L+ + A + L M + G P
Sbjct: 387 AH--PPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVP 425
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 94/230 (40%), Gaps = 24/230 (10%)
Query: 400 DEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSIL 459
D R + N + P S Y L + + K+MK+ S + + +
Sbjct: 93 DSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFI 152
Query: 460 INGLCKNGKLMEAMMVWKQML-SRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQE 518
I KNG + +A+ ++ + + G + V Y+S++H C+ ++ L +M+
Sbjct: 153 IEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMI--R 210
Query: 519 AELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQ 578
L+PD TY IL+N + + A + L+ M +G NPP
Sbjct: 211 KGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRG------------------FNPPA 252
Query: 579 DGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCK 628
GR+ L E L+ A +++ M +P+ T+ I+++ + K
Sbjct: 253 RGRDLLIE---GLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISK 299
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 174/365 (47%), Gaps = 11/365 (3%)
Query: 138 KSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGL----TFNLVIKALCKVGLVDQAV 193
+++NS+++++ + R E V + + + GL TF + +KA +AV
Sbjct: 196 RTYNSMMSILAKT----RQFETMVSVLEEMGTK--GLLTMETFTIAMKAFAAAKERKKAV 249
Query: 194 EVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISAL 253
+F + T + L+D L + EA L D+++ T PN + VL++
Sbjct: 250 GIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFT-PNMMTYTVLLNGW 308
Query: 254 CKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPND 313
C+ +LI AA++ ++M +G P+ V +N +++GL R K + A+ L + M + PN
Sbjct: 309 CRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNV 368
Query: 314 VTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKE 373
++ ++ F KQ + + G + + +Y+ LI+G + K + +L KE
Sbjct: 369 RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKE 428
Query: 374 MMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGD 433
M EKG P+ Y+ALI + + + A +M P+ T++ +M+ +F A +
Sbjct: 429 MQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARN 488
Query: 434 CHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSS 493
VW+EM ++ Y++LI GL GK EA ++ML +G+K ++ Y+
Sbjct: 489 YEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNK 548
Query: 494 MIHGF 498
F
Sbjct: 549 FAADF 553
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 174/378 (46%), Gaps = 8/378 (2%)
Query: 59 WGSYKLG----DLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKA 114
W + + G ++ S++ LA + F ++ +L++M + + +E F + KA+ A
Sbjct: 184 WAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAA 242
Query: 115 HFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGL 174
+KAV +F M+ ++ K V++ N +L+ + + A + + + PN +
Sbjct: 243 KERKKAVGIFELMK-KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFT--PNMM 299
Query: 175 TFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEM 234
T+ +++ C+V + +A ++ + + PD ++ +++GL + + +A+ L M
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVM 359
Query: 235 QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKL 294
+ +G PN + ++I CK+ + A + D+M G P+ Y L+ G + KL
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 295 NKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSL 354
+ LL +M P+ T+ L+ Q + + + + + ++ +
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMI 479
Query: 355 ISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGH 414
+ F +E +W+EM++KG P+ Y+ LI GL EGK+ EA YL EM +KG
Sbjct: 480 MKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539
Query: 415 LPNSFTYSSLMRGFFEAG 432
Y+ F G
Sbjct: 540 KTPLIDYNKFAADFHRGG 557
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 167/366 (45%), Gaps = 39/366 (10%)
Query: 205 APDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAK 264
A DS TY+++M L K + + VS+L+EM +G F + + A + +A
Sbjct: 192 AHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVG 250
Query: 265 LVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFV 324
+ + M T N L+D L R KL K +L + + PN +T+ L++G+
Sbjct: 251 IFELMKKYKFKIGVETINCLLDSLGR-AKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWC 309
Query: 325 KQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTV 384
+ +LI A ++W +M+++G +P+ V
Sbjct: 310 R-------------------------VRNLI----------EAARIWNDMIDQGLKPDIV 334
Query: 385 VYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEM 444
++ +++GL R K +A + MK+KG PN +Y+ ++R F + AI + +M
Sbjct: 335 AHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 445 KNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLV 504
++ + Y+ LI G KL + K+M +G D Y+++I N ++
Sbjct: 395 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 454
Query: 505 DQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCD 564
+ +++N+M+ + E++P + T+N+++ +++ N V M+ +G PD +
Sbjct: 455 EHATRIYNKMI--QNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYT 512
Query: 565 IFLKTL 570
+ ++ L
Sbjct: 513 VLIRGL 518
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 151/311 (48%), Gaps = 28/311 (9%)
Query: 340 EERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGC---EPNTVVYSALIDGLCRE 396
E +G + Y+S++S L K +FE + + +EM KG E T+ A R+
Sbjct: 187 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERK 246
Query: 397 GKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCY 456
KA E + + K K + T + L+ A +A +++ ++K N + Y
Sbjct: 247 -KAVGIFELMKKYKFKIGVE---TINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTY 301
Query: 457 SILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLC 516
++L+NG C+ L+EA +W M+ +G+K D+VA++ M+ G ++ +KLF+ M
Sbjct: 302 TVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKS 361
Query: 517 QEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD--FITCDI--------- 565
+ P+V +Y I++ F +Q+++ A++ + M+D G PD TC I
Sbjct: 362 KGP--CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 566 -----FLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWA 620
LK +++ +PP DG+ + + L+ + ++ A++I M+ + P T+
Sbjct: 420 DTVYELLKEMQEKGHPP-DGKTY-NALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFN 477
Query: 621 IVVQQLCKPRN 631
++++ RN
Sbjct: 478 MIMKSYFMARN 488
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 150/306 (49%), Gaps = 9/306 (2%)
Query: 280 TYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISL 339
TY T+V L R + LL++MV + C PN VT+ L+H + + ++ +V +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 340 EERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKA 399
+E G + + Y +LI K G + AM +++ M G P+T YS +I+ L + G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 400 DEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSIL 459
A + EM ++G PN TY+ +M +A + A+ ++++M+N ++V YSI+
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 460 INGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEA 519
+ L G L EA V+ +M + D Y ++ + A V++ + + ML A
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML--HA 603
Query: 520 ELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQD 579
L+P+V T N LL+ F + N I+ A ++L ML G P T + L D
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCC-------TD 656
Query: 580 GREFLD 585
GR LD
Sbjct: 657 GRSKLD 662
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 141/289 (48%), Gaps = 2/289 (0%)
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM 304
+ ++ L + KL+D M GC PN VTYN L+ R LN+A+++ NQM
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 305 VANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKF 364
C P+ VT+ TL+ K G + ++ G + + YS +I+ L K G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 365 EHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSL 424
A +L+ EM+++GC PN V Y+ ++D + A + +M+N G P+ TYS +
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 425 MRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGI 484
M G +A V+ EM+ + +E Y +L++ K G + +A ++ ML G+
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Query: 485 KLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLN 533
+ +V +S++ F + + +L ML L+P + TY +LL+
Sbjct: 606 RPNVPTCNSLLSTFLRVNKIAEAYELLQNMLA--LGLRPSLQTYTLLLS 652
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 167/376 (44%), Gaps = 35/376 (9%)
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVS 229
QPN +T+N +I + + +++A+ VF + C PD TY TL+D K G +D A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 230 LLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
+ MQ G P+ F ++V+I+ L K G L A KL M +GC PN VTYN ++D
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEY 349
+ A+ L M P+ VT+ ++ G + +V ++++ +E
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
+Y L+ K G E A Q ++ M+ G PN ++L+ R K EA E L M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 410 KNKGHLPNSFTYSSLM------RGFFEAGDC--------HKAILVWKEM----------K 445
G P+ TY+ L+ R + G C H A + +M +
Sbjct: 636 LALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVR 695
Query: 446 NNSCNHNEVCYS-----------ILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSM 494
N++ N ++ +S +++ L K+G+ EA VW+ + + D + S
Sbjct: 696 NHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSC 755
Query: 495 IHGFCNAQLVDQGMKL 510
+ N ++ +G +
Sbjct: 756 SYWLINLHVMSEGTAV 771
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 160/373 (42%), Gaps = 46/373 (12%)
Query: 146 VIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCA 205
V+ Q + AL F+ + + + +G T+ ++ L + ++ + C
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396
Query: 206 PDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKL 265
P++ TY+ L+ + ++EA+++ ++MQ G P+ + LI K G L A +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 266 VDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVK 325
M G P+ TY+ +++ L + G L A L +MV C PN VT+
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY--------- 507
Query: 326 QGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVV 385
++++ L + +++A++L+++M G EP+ V
Sbjct: 508 --------NIMMDLHAKAR------------------NYQNALKLYRDMQNAGFEPDKVT 541
Query: 386 YSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMK 445
YS +++ L G +EA EM+ K +P+ Y L+ + +AG+ KA ++ M
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 446 NNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIH--------- 496
+ N + L++ + K+ EA + + ML+ G++ + Y+ ++
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKL 661
Query: 497 --GFCNAQLVDQG 507
GFC + G
Sbjct: 662 DMGFCGQLMASTG 674
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 204/448 (45%), Gaps = 27/448 (6%)
Query: 62 YKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAV 121
+K ++ +++ L + F ++ +LL +M R+ + + +YG+A++ +A+
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAM 419
Query: 122 NLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIK 181
N+F++M+ E CK ++ +++++ + G A++ Y + ++ + P+ T++++I
Sbjct: 420 NVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QAGGLSPDTFTYSVIIN 477
Query: 182 ALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFP 241
L K G + A ++F + + C P+ TY+ +MD K A+ L +MQ G P
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 242 NPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLL 301
+ +++++ L G L A + M K +P+E Y LVD + G + KA
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 302 NQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKE 361
M+ PN T +L+ F++ + ++ +L ++ G R + Y+ L+S +
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTD 656
Query: 362 GKFEHAMQLWKEMMEKGCEPNTV----VYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
G+ + M ++M P + + +A DG E + A +L M ++
Sbjct: 657 GRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDG---ENVRNHANNFLDLMHSEDRESK 713
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWK----------EMKNNSCNHNEVCYSILINGLCKNG 467
+++ ++G +A VW+ ++ SC++ + ++ G
Sbjct: 714 RGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTA 773
Query: 468 KLMEAMMVW--KQMLSRGI---KLDVVA 490
+ + W KQML+ G ++D+V
Sbjct: 774 --LSRTLAWFRKQMLASGTCPSRIDIVT 799
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 2/219 (0%)
Query: 341 ERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
+ G + + + Y++++ L + +F +L EM+ GC+PNTV Y+ LI R +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 401 EAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILI 460
EA +M+ G P+ TY +L+ +AG A+ +++ M+ + + YS++I
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 461 NGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAE 520
N L K G L A ++ +M+ +G ++V Y+ M+ A+ +KL+ M Q A
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM--QNAG 534
Query: 521 LQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
+PD TY+I++ + A V M + PD
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 150/306 (49%), Gaps = 9/306 (2%)
Query: 280 TYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISL 339
TY T+V L R + LL++MV + C PN VT+ L+H + + ++ +V +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 340 EERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKA 399
+E G + + Y +LI K G + AM +++ M G P+T YS +I+ L + G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 400 DEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSIL 459
A + EM ++G PN TY+ +M +A + A+ ++++M+N ++V YSI+
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 460 INGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEA 519
+ L G L EA V+ +M + D Y ++ + A V++ + + ML A
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML--HA 603
Query: 520 ELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQD 579
L+P+V T N LL+ F + N I+ A ++L ML G P T + L D
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCC-------TD 656
Query: 580 GREFLD 585
GR LD
Sbjct: 657 GRSKLD 662
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 141/289 (48%), Gaps = 2/289 (0%)
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM 304
+ ++ L + KL+D M GC PN VTYN L+ R LN+A+++ NQM
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 305 VANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKF 364
C P+ VT+ TL+ K G + ++ G + + YS +I+ L K G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 365 EHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSL 424
A +L+ EM+++GC PN V Y+ ++D + A + +M+N G P+ TYS +
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 425 MRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGI 484
M G +A V+ EM+ + +E Y +L++ K G + +A ++ ML G+
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Query: 485 KLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLN 533
+ +V +S++ F + + +L ML L+P + TY +LL+
Sbjct: 606 RPNVPTCNSLLSTFLRVNKIAEAYELLQNMLA--LGLRPSLQTYTLLLS 652
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 167/376 (44%), Gaps = 35/376 (9%)
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVS 229
QPN +T+N +I + + +++A+ VF + C PD TY TL+D K G +D A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 230 LLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
+ MQ G P+ F ++V+I+ L K G L A KL M +GC PN VTYN ++D
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEY 349
+ A+ L M P+ VT+ ++ G + +V ++++ +E
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
+Y L+ K G E A Q ++ M+ G PN ++L+ R K EA E L M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 410 KNKGHLPNSFTYSSLM------RGFFEAGDC--------HKAILVWKEM----------K 445
G P+ TY+ L+ R + G C H A + +M +
Sbjct: 636 LALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVR 695
Query: 446 NNSCNHNEVCYS-----------ILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSM 494
N++ N ++ +S +++ L K+G+ EA VW+ + + D + S
Sbjct: 696 NHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSC 755
Query: 495 IHGFCNAQLVDQGMKL 510
+ N ++ +G +
Sbjct: 756 SYWLINLHVMSEGTAV 771
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 160/373 (42%), Gaps = 46/373 (12%)
Query: 146 VIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCA 205
V+ Q + AL F+ + + + +G T+ ++ L + ++ + C
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396
Query: 206 PDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKL 265
P++ TY+ L+ + ++EA+++ ++MQ G P+ + LI K G L A +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 266 VDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVK 325
M G P+ TY+ +++ L + G L A L +MV C PN VT+
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY--------- 507
Query: 326 QGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVV 385
++++ L + +++A++L+++M G EP+ V
Sbjct: 508 --------NIMMDLHAKAR------------------NYQNALKLYRDMQNAGFEPDKVT 541
Query: 386 YSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMK 445
YS +++ L G +EA EM+ K +P+ Y L+ + +AG+ KA ++ M
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 446 NNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIH--------- 496
+ N + L++ + K+ EA + + ML+ G++ + Y+ ++
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKL 661
Query: 497 --GFCNAQLVDQG 507
GFC + G
Sbjct: 662 DMGFCGQLMASTG 674
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 204/448 (45%), Gaps = 27/448 (6%)
Query: 62 YKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAV 121
+K ++ +++ L + F ++ +LL +M R+ + + +YG+A++ +A+
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAM 419
Query: 122 NLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIK 181
N+F++M+ E CK ++ +++++ + G A++ Y + ++ + P+ T++++I
Sbjct: 420 NVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QAGGLSPDTFTYSVIIN 477
Query: 182 ALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFP 241
L K G + A ++F + + C P+ TY+ +MD K A+ L +MQ G P
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 242 NPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLL 301
+ +++++ L G L A + M K +P+E Y LVD + G + KA
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 302 NQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKE 361
M+ PN T +L+ F++ + ++ +L ++ G R + Y+ L+S +
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTD 656
Query: 362 GKFEHAMQLWKEMMEKGCEPNTV----VYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
G+ + M ++M P + + +A DG E + A +L M ++
Sbjct: 657 GRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDG---ENVRNHANNFLDLMHSEDRESK 713
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWK----------EMKNNSCNHNEVCYSILINGLCKNG 467
+++ ++G +A VW+ ++ SC++ + ++ G
Sbjct: 714 RGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTA 773
Query: 468 KLMEAMMVW--KQMLSRGI---KLDVVA 490
+ + W KQML+ G ++D+V
Sbjct: 774 --LSRTLAWFRKQMLASGTCPSRIDIVT 799
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 2/219 (0%)
Query: 341 ERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
+ G + + + Y++++ L + +F +L EM+ GC+PNTV Y+ LI R +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 401 EAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILI 460
EA +M+ G P+ TY +L+ +AG A+ +++ M+ + + YS++I
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 461 NGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAE 520
N L K G L A ++ +M+ +G ++V Y+ M+ A+ +KL+ M Q A
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM--QNAG 534
Query: 521 LQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
+PD TY+I++ + A V M + PD
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 150/306 (49%), Gaps = 9/306 (2%)
Query: 280 TYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISL 339
TY T+V L R + LL++MV + C PN VT+ L+H + + ++ +V +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 340 EERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKA 399
+E G + + Y +LI K G + AM +++ M G P+T YS +I+ L + G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 400 DEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSIL 459
A + EM ++G PN TY+ +M +A + A+ ++++M+N ++V YSI+
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 460 INGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEA 519
+ L G L EA V+ +M + D Y ++ + A V++ + + ML A
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML--HA 603
Query: 520 ELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQD 579
L+P+V T N LL+ F + N I+ A ++L ML G P T + L D
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCC-------TD 656
Query: 580 GREFLD 585
GR LD
Sbjct: 657 GRSKLD 662
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 141/289 (48%), Gaps = 2/289 (0%)
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM 304
+ ++ L + KL+D M GC PN VTYN L+ R LN+A+++ NQM
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 305 VANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKF 364
C P+ VT+ TL+ K G + ++ G + + YS +I+ L K G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 365 EHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSL 424
A +L+ EM+++GC PN V Y+ ++D + A + +M+N G P+ TYS +
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 425 MRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGI 484
M G +A V+ EM+ + +E Y +L++ K G + +A ++ ML G+
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Query: 485 KLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLN 533
+ +V +S++ F + + +L ML L+P + TY +LL+
Sbjct: 606 RPNVPTCNSLLSTFLRVNKIAEAYELLQNMLA--LGLRPSLQTYTLLLS 652
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 167/376 (44%), Gaps = 35/376 (9%)
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVS 229
QPN +T+N +I + + +++A+ VF + C PD TY TL+D K G +D A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 230 LLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
+ MQ G P+ F ++V+I+ L K G L A KL M +GC PN VTYN ++D
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEY 349
+ A+ L M P+ VT+ ++ G + +V ++++ +E
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
+Y L+ K G E A Q ++ M+ G PN ++L+ R K EA E L M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 410 KNKGHLPNSFTYSSLM------RGFFEAGDC--------HKAILVWKEM----------K 445
G P+ TY+ L+ R + G C H A + +M +
Sbjct: 636 LALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVR 695
Query: 446 NNSCNHNEVCYS-----------ILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSM 494
N++ N ++ +S +++ L K+G+ EA VW+ + + D + S
Sbjct: 696 NHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSC 755
Query: 495 IHGFCNAQLVDQGMKL 510
+ N ++ +G +
Sbjct: 756 SYWLINLHVMSEGTAV 771
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 160/373 (42%), Gaps = 46/373 (12%)
Query: 146 VIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCA 205
V+ Q + AL F+ + + + +G T+ ++ L + ++ + C
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396
Query: 206 PDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKL 265
P++ TY+ L+ + ++EA+++ ++MQ G P+ + LI K G L A +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 266 VDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVK 325
M G P+ TY+ +++ L + G L A L +MV C PN VT+
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY--------- 507
Query: 326 QGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVV 385
++++ L + +++A++L+++M G EP+ V
Sbjct: 508 --------NIMMDLHAKAR------------------NYQNALKLYRDMQNAGFEPDKVT 541
Query: 386 YSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMK 445
YS +++ L G +EA EM+ K +P+ Y L+ + +AG+ KA ++ M
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 446 NNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIH--------- 496
+ N + L++ + K+ EA + + ML+ G++ + Y+ ++
Sbjct: 602 HAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKL 661
Query: 497 --GFCNAQLVDQG 507
GFC + G
Sbjct: 662 DMGFCGQLMASTG 674
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 204/448 (45%), Gaps = 27/448 (6%)
Query: 62 YKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAV 121
+K ++ +++ L + F ++ +LL +M R+ + + +YG+A++ +A+
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAM 419
Query: 122 NLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIK 181
N+F++M+ E CK ++ +++++ + G A++ Y + ++ + P+ T++++I
Sbjct: 420 NVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QAGGLSPDTFTYSVIIN 477
Query: 182 ALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFP 241
L K G + A ++F + + C P+ TY+ +MD K A+ L +MQ G P
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 242 NPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLL 301
+ +++++ L G L A + M K +P+E Y LVD + G + KA
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 302 NQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKE 361
M+ PN T +L+ F++ + ++ +L ++ G R + Y+ L+S +
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTD 656
Query: 362 GKFEHAMQLWKEMMEKGCEPNTV----VYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
G+ + M ++M P + + +A DG E + A +L M ++
Sbjct: 657 GRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDG---ENVRNHANNFLDLMHSEDRESK 713
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWK----------EMKNNSCNHNEVCYSILINGLCKNG 467
+++ ++G +A VW+ ++ SC++ + ++ G
Sbjct: 714 RGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTA 773
Query: 468 KLMEAMMVW--KQMLSRGI---KLDVVA 490
+ + W KQML+ G ++D+V
Sbjct: 774 --LSRTLAWFRKQMLASGTCPSRIDIVT 799
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 2/219 (0%)
Query: 341 ERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
+ G + + + Y++++ L + +F +L EM+ GC+PNTV Y+ LI R +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 401 EAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILI 460
EA +M+ G P+ TY +L+ +AG A+ +++ M+ + + YS++I
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 461 NGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAE 520
N L K G L A ++ +M+ +G ++V Y+ M+ A+ +KL+ M Q A
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM--QNAG 534
Query: 521 LQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
+PD TY+I++ + A V M + PD
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 122/542 (22%), Positives = 228/542 (42%), Gaps = 89/542 (16%)
Query: 101 EKNFIVIFKAYGKAHFPEKAVNLFHRME-----AEFHCKQTVKSFNSVLN---------- 145
EKN F+A K +++ L H ++ A H Q K S+L+
Sbjct: 64 EKNTTSSFQALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYKDRQLSIR 123
Query: 146 ----VIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHL 201
++ +E + R+L V + P+ +N+V++ + + D A +F +
Sbjct: 124 FMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQ 183
Query: 202 RNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQ--------------IE---------- 237
R APD YTYSTL+ KEG D A+S L +M+ IE
Sbjct: 184 RALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSK 243
Query: 238 -----------GTFPNPFVFNVLISALCKKGDLIRAAK-LVDNMSLKGCVPNEVTYNTLV 285
G P+ +N +I+ + K L R A+ L+ M+ G +PN V+Y+TL+
Sbjct: 244 AISIFSRLKRSGITPDLVAYNSMIN-VYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLL 302
Query: 286 DGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR 345
K +A+S+ +M C + T ++ + + + + SL +
Sbjct: 303 SVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIE 362
Query: 346 GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREY 405
N Y++++ + F A+ L++ M K E N V Y+ +I + + ++A
Sbjct: 363 PNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNL 422
Query: 406 LIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILING--- 462
+ EM+++G PN+ TYS+++ + +AG +A ++++++++ ++V Y +I
Sbjct: 423 VQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYER 482
Query: 463 ----------------------------LCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSM 494
L K G+ EA V++Q G D+ + M
Sbjct: 483 VGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCM 542
Query: 495 IHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQ 554
I+ + Q +++F +M + A PD ++LNA+ +Q +A V M ++
Sbjct: 543 INLYSRNQRYVNVIEVFEKM--RTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEE 600
Query: 555 GC 556
GC
Sbjct: 601 GC 602
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 191/464 (41%), Gaps = 48/464 (10%)
Query: 218 LCKEGRIDEAVSLLDEMQIEGTF-PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVP 276
L +E +++LLD + E + P+ F +NV++ + + A L D M + P
Sbjct: 129 LSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAP 188
Query: 277 NEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVL 336
+ TY+TL+ ++G + A+S L +M ++ + V + L+ + S S+
Sbjct: 189 DRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIF 248
Query: 337 ISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCRE 396
L+ G + Y+S+I+ K F A L KEM E G PNTV YS L+
Sbjct: 249 SRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVEN 308
Query: 397 GKADEAREYLIEMKN----------------KGHL-------------------PNSFTY 421
K EA EMK G L PN +Y
Sbjct: 309 HKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSY 368
Query: 422 SSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLS 481
++++R + EA +AI +++ M+ N V Y+ +I K + +A + ++M S
Sbjct: 369 NTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQS 428
Query: 482 RGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNI 541
RGI+ + + YS++I + A +D+ LF ++ E+ D Y ++ A+ + +
Sbjct: 429 RGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEI--DQVLYQTMIVAYERVGLM 486
Query: 542 SRAMDVLNIMLDQGCDPDFITCDIFLKTLRDN-----MNPPQDGREFLDELV----VRLV 592
A +L+ + P I K R + E D V + L
Sbjct: 487 GHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLY 546
Query: 593 KR-QRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKA 635
R QR + ++ E M P+++ A+V+ K R KA
Sbjct: 547 SRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKA 590
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/455 (19%), Positives = 200/455 (43%), Gaps = 40/455 (8%)
Query: 65 GDLSFYS-LIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNL 123
GDL YS LIE D++ + ++KR + + YGKA +A L
Sbjct: 223 GDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLL 282
Query: 124 FHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHV-------------------- 163
M TV S++++L+V ++ F AL ++ +
Sbjct: 283 IKEMNEAGVLPNTV-SYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYG 341
Query: 164 --------------CKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSY 209
+ ++I+PN +++N +++ + L +A+ +FR + ++ +
Sbjct: 342 QLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVV 401
Query: 210 TYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNM 269
TY+T++ K ++A +L+ EMQ G PN ++ +IS K G L RAA L +
Sbjct: 402 TYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL 461
Query: 270 SLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRA 329
G ++V Y T++ R G + A LL+++ +P+++ T + K GR
Sbjct: 462 RSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL----KLPDNIPRETAITILAKAGRT 517
Query: 330 SDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSAL 389
+ V E G + ++ +I+ + ++ + ++++++M G P++ V + +
Sbjct: 518 EEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMV 577
Query: 390 IDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSC 449
++ ++ + ++A EM+ +G + + ++ + D +++ ++++
Sbjct: 578 LNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPN 637
Query: 450 NHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGI 484
+++ + ++ + KL +A V +M RGI
Sbjct: 638 VNSKELHLVVAALYERADKLNDASRVMNRMRERGI 672
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 197/421 (46%), Gaps = 43/421 (10%)
Query: 134 KQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAV 193
K + +++ ++++ + + R EF + + N T +++ G ++AV
Sbjct: 118 KHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLN--TVAKIMRRFAGAGEWEEAV 175
Query: 194 EVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISAL 253
+F + ++ + + L+D LCKE R+++A +L +++ T PN FN+ I
Sbjct: 176 GIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHIT-PNAHTFNIFIHGW 234
Query: 254 CKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPND 313
CK + A + M G P ++Y T++ C++ + K +L++M AN PN
Sbjct: 235 CKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNS 294
Query: 314 VTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKE 373
+T Y++++S L + +FE A+++
Sbjct: 295 IT-----------------------------------YTTIMSSLNAQKEFEEALRVATR 319
Query: 374 MMEKGCEPNTVVYSALIDGLCREGKADEA-REYLIEMKNKGHLPNSFTYSSLMRGFFEAG 432
M GC+P+++ Y+ LI L R G+ +EA R + +EM G N+ TY+S++ +
Sbjct: 320 MKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHD 379
Query: 433 DCHKAILVWKEMKN-NSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSR-GIKLDVVA 490
+ KAI + KEM++ N CN + Y L+ K G ++E + K+M+++ + LD
Sbjct: 380 EEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDEST 439
Query: 491 YSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNI 550
Y+ +I C A + + LF +M+ Q ++ P T +LL ++N A + +I
Sbjct: 440 YTFLIQRLCRANMCEWAYCLFEEMISQ--DITPRHRTCLLLLEEVKKKNMHESAERIEHI 497
Query: 551 M 551
M
Sbjct: 498 M 498
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 153/352 (43%), Gaps = 47/352 (13%)
Query: 208 SYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVD 267
S Y +D L K + D ++ M+ + V ++ G+ A + D
Sbjct: 121 SDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIM-RRFAGAGEWEEAVGIFD 179
Query: 268 NMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQG 327
+ G N + N L+D LC++ ++ +A +L Q+ ++ PN TF +HG+ K
Sbjct: 180 RLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKAN 238
Query: 328 RASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYS 387
R E A+ +EM G P + Y+
Sbjct: 239 RV-----------------------------------EEALWTIQEMKGHGFRPCVISYT 263
Query: 388 ALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNN 447
+I C++ + + E L EM+ G PNS TY+++M + +A+ V MK +
Sbjct: 264 TIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRS 323
Query: 448 SCNHNEVCYSILINGLCKNGKLMEAMMVWK-QMLSRGIKLDVVAYSSMIHGFCNAQLVDQ 506
C + + Y+ LI+ L + G+L EA V++ +M G+ ++ Y+SMI +C+ D+
Sbjct: 324 GCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDK 383
Query: 507 GMKLFNQM----LCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQ 554
++L +M LC PDV TY LL + +++ ++ +L M+ +
Sbjct: 384 AIELLKEMESSNLC-----NPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTK 430
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 101/216 (46%), Gaps = 5/216 (2%)
Query: 103 NFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSH 162
++ I + Y + K + MEA ++ ++ ++++ + + F AL +
Sbjct: 261 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSI-TYTTIMSSLNAQKEFEEALRVATR 319
Query: 163 VCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFR-GIHLRNCAPDSYTYSTLMDGLCKE 221
+ +S +P+ L +N +I L + G +++A VFR + + ++ TY++++ C
Sbjct: 320 MKRS-GCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHH 378
Query: 222 GRIDEAVSLLDEMQIEGTF-PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVP-NEV 279
D+A+ LL EM+ P+ + L+ + K+GD++ KL+ M K + +E
Sbjct: 379 DEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDES 438
Query: 280 TYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVT 315
TY L+ LCR A L +M++ P T
Sbjct: 439 TYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT 474
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 106/231 (45%), Gaps = 44/231 (19%)
Query: 345 RGNEYIYSSLISGLFKE----GKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
RG++ + + ++ + + G++E A+ ++ + E G E NT + L+D LC+E + +
Sbjct: 148 RGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVE 207
Query: 401 EAREYLIEMKNKGHL-PNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSIL 459
+AR L+++K+ H+ PN+ T++ I
Sbjct: 208 QARVVLLQLKS--HITPNAHTFN-----------------------------------IF 230
Query: 460 INGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEA 519
I+G CK ++ EA+ ++M G + V++Y+++I +C + ++ ++M +
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 520 ELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
P+ TY ++++ Q A+ V M GC PD + + + TL
Sbjct: 291 --PPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 93/228 (40%), Gaps = 3/228 (1%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
+S+ ++I +F + E+L +M+ + I + E+A+ + R
Sbjct: 260 ISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATR 319
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
M+ CK +N +++ + + G A + L + N T+N +I C
Sbjct: 320 MKRS-GCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHH 378
Query: 187 GLVDQAVEVFRGIHLRN-CAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFP-NPF 244
D+A+E+ + + N C PD +TY L+ K G + E LL EM + +
Sbjct: 379 DEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDES 438
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKG 292
+ LI LC+ A L + M + P T L++ + +K
Sbjct: 439 TYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKN 486
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 197/421 (46%), Gaps = 43/421 (10%)
Query: 134 KQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAV 193
K + +++ ++++ + + R EF + + N T +++ G ++AV
Sbjct: 118 KHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLN--TVAKIMRRFAGAGEWEEAV 175
Query: 194 EVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISAL 253
+F + ++ + + L+D LCKE R+++A +L +++ T PN FN+ I
Sbjct: 176 GIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHIT-PNAHTFNIFIHGW 234
Query: 254 CKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPND 313
CK + A + M G P ++Y T++ C++ + K +L++M AN PN
Sbjct: 235 CKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNS 294
Query: 314 VTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKE 373
+T Y++++S L + +FE A+++
Sbjct: 295 IT-----------------------------------YTTIMSSLNAQKEFEEALRVATR 319
Query: 374 MMEKGCEPNTVVYSALIDGLCREGKADEA-REYLIEMKNKGHLPNSFTYSSLMRGFFEAG 432
M GC+P+++ Y+ LI L R G+ +EA R + +EM G N+ TY+S++ +
Sbjct: 320 MKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHD 379
Query: 433 DCHKAILVWKEMKN-NSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSR-GIKLDVVA 490
+ KAI + KEM++ N CN + Y L+ K G ++E + K+M+++ + LD
Sbjct: 380 EEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDEST 439
Query: 491 YSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNI 550
Y+ +I C A + + LF +M+ Q ++ P T +LL ++N A + +I
Sbjct: 440 YTFLIQRLCRANMCEWAYCLFEEMISQ--DITPRHRTCLLLLEEVKKKNMHESAERIEHI 497
Query: 551 M 551
M
Sbjct: 498 M 498
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 153/352 (43%), Gaps = 47/352 (13%)
Query: 208 SYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVD 267
S Y +D L K + D ++ M+ + V ++ G+ A + D
Sbjct: 121 SDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIM-RRFAGAGEWEEAVGIFD 179
Query: 268 NMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQG 327
+ G N + N L+D LC++ ++ +A +L Q+ ++ PN TF +HG+ K
Sbjct: 180 RLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKAN 238
Query: 328 RASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYS 387
R E A+ +EM G P + Y+
Sbjct: 239 RV-----------------------------------EEALWTIQEMKGHGFRPCVISYT 263
Query: 388 ALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNN 447
+I C++ + + E L EM+ G PNS TY+++M + +A+ V MK +
Sbjct: 264 TIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRS 323
Query: 448 SCNHNEVCYSILINGLCKNGKLMEAMMVWK-QMLSRGIKLDVVAYSSMIHGFCNAQLVDQ 506
C + + Y+ LI+ L + G+L EA V++ +M G+ ++ Y+SMI +C+ D+
Sbjct: 324 GCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDK 383
Query: 507 GMKLFNQM----LCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQ 554
++L +M LC PDV TY LL + +++ ++ +L M+ +
Sbjct: 384 AIELLKEMESSNLC-----NPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTK 430
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 101/216 (46%), Gaps = 5/216 (2%)
Query: 103 NFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSH 162
++ I + Y + K + MEA ++ ++ ++++ + + F AL +
Sbjct: 261 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSI-TYTTIMSSLNAQKEFEEALRVATR 319
Query: 163 VCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFR-GIHLRNCAPDSYTYSTLMDGLCKE 221
+ +S +P+ L +N +I L + G +++A VFR + + ++ TY++++ C
Sbjct: 320 MKRS-GCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHH 378
Query: 222 GRIDEAVSLLDEMQIEGTF-PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVP-NEV 279
D+A+ LL EM+ P+ + L+ + K+GD++ KL+ M K + +E
Sbjct: 379 DEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDES 438
Query: 280 TYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVT 315
TY L+ LCR A L +M++ P T
Sbjct: 439 TYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT 474
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 106/231 (45%), Gaps = 44/231 (19%)
Query: 345 RGNEYIYSSLISGLFKE----GKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
RG++ + + ++ + + G++E A+ ++ + E G E NT + L+D LC+E + +
Sbjct: 148 RGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVE 207
Query: 401 EAREYLIEMKNKGHL-PNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSIL 459
+AR L+++K+ H+ PN+ T++ I
Sbjct: 208 QARVVLLQLKS--HITPNAHTFN-----------------------------------IF 230
Query: 460 INGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEA 519
I+G CK ++ EA+ ++M G + V++Y+++I +C + ++ ++M +
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 520 ELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
P+ TY ++++ Q A+ V M GC PD + + + TL
Sbjct: 291 --PPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 93/228 (40%), Gaps = 3/228 (1%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
+S+ ++I +F + E+L +M+ + I + E+A+ + R
Sbjct: 260 ISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATR 319
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
M+ CK +N +++ + + G A + L + N T+N +I C
Sbjct: 320 MKRS-GCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHH 378
Query: 187 GLVDQAVEVFRGIHLRN-CAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFP-NPF 244
D+A+E+ + + N C PD +TY L+ K G + E LL EM + +
Sbjct: 379 DEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDES 438
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKG 292
+ LI LC+ A L + M + P T L++ + +K
Sbjct: 439 TYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKN 486
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 145/311 (46%), Gaps = 35/311 (11%)
Query: 169 IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAV 228
I PN +T ++I+ LCK G + + V++ I + C P ++L+ + +E RI+E++
Sbjct: 230 IYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESM 289
Query: 229 SLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGL 288
SLL + ++ + +++++ A K+GDL+ A K+ D M +G N Y V
Sbjct: 290 SLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVC 349
Query: 289 CRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGA--------------- 333
C KG + +A LL++M + P D TF L+ GF + G G
Sbjct: 350 CEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSC 409
Query: 334 --------------------SVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKE 373
+L ++G +E+ YS LI G + + A++L+ E
Sbjct: 410 SAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYE 469
Query: 374 MMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGD 433
M + P V+ +LI GLC GK + +YL MK + PN+ Y +L++ F + GD
Sbjct: 470 MEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGD 529
Query: 434 CHKAILVWKEM 444
A V+ EM
Sbjct: 530 KTNADRVYNEM 540
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 181/380 (47%), Gaps = 4/380 (1%)
Query: 174 LTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDE 233
L F+L+++ K+ ++ +VF+ + T +TL+ K +ID+ V + E
Sbjct: 165 LVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSK-SKIDDLVWRIYE 223
Query: 234 MQIEG-TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKG 292
I+ +PN ++I LCK+G L L+D + K C+P+ + +LV + +
Sbjct: 224 CAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEM 283
Query: 293 KLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYS 352
++ +++SLL +++ V + + + +V+ K+G V + +RG N ++Y+
Sbjct: 284 RIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYT 343
Query: 353 SLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK 412
+ ++G + A +L EM E G P ++ LI G R G ++ EY M +
Sbjct: 344 VFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTR 403
Query: 413 GHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEA 472
G +P+ ++ +++ + + ++A + + + +E YS LI G + + +A
Sbjct: 404 GLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQA 463
Query: 473 MMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILL 532
+ ++ +M R + + S+I G C V+ G K M ++ ++P+ Y+ L+
Sbjct: 464 LKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIM--KKRLIEPNADIYDALI 521
Query: 533 NAFYQQNNISRAMDVLNIML 552
AF + + + A V N M+
Sbjct: 522 KAFQKIGDKTNADRVYNEMI 541
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/492 (21%), Positives = 197/492 (40%), Gaps = 78/492 (15%)
Query: 155 RALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTL 214
+AL F+ + N++ ++ L I L K L+ A + L N PDS
Sbjct: 95 QALSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDARALIES-SLLNSPPDS------ 147
Query: 215 MDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGC 274
D SLLD +I + P VF++L+ K L + + G
Sbjct: 148 ----------DLVDSLLDTYEISSS--TPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGF 195
Query: 275 VPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCV-PNDVTFGTLVHGFVKQGRASDGA 333
+ +T NTL+ K K++ V + + +K + PN++T ++ K+GR +
Sbjct: 196 TLSVITLNTLIH-YSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVV 254
Query: 334 SVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGL 393
+L + + + + +SL+ + +E + E +M L K ++ K +T+ YS ++
Sbjct: 255 DLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAK 314
Query: 394 CREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNE 453
+EG AR+ EM L RGF + N
Sbjct: 315 AKEGDLVSARKVFDEM--------------LQRGF---------------------SANS 339
Query: 454 VCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQ 513
Y++ + C+ G + EA + +M G+ ++ +I GF ++G++
Sbjct: 340 FVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEV 399
Query: 514 MLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD----------FI-- 561
M+ + L P + +N ++ + + N++RA ++L +D+G PD FI
Sbjct: 400 MVTRG--LMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEG 457
Query: 562 -----TCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEA 616
+F + M+P G E L+V L + K +++M R + P A
Sbjct: 458 NDIDQALKLFYEMEYRKMSP---GFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNA 514
Query: 617 STWAIVVQQLCK 628
+ +++ K
Sbjct: 515 DIYDALIKAFQK 526
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 160/354 (45%), Gaps = 8/354 (2%)
Query: 69 FYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRME 128
+ +++ L F ++ +M + EK + V+ Y AH ++AV +F R
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFER-R 204
Query: 129 AEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGL 188
EF + +F+ +L + + H A + + + N+++ C +G
Sbjct: 205 KEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAM--NMILNGWCVLGN 262
Query: 189 VDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNV 248
V +A ++ I C PD +Y T+++ L K+G++ +A+ L M P+ + N
Sbjct: 263 VHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNN 322
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM--VA 306
+I ALC K + A ++ +S KG PN VTYN+L+ LC+ + K L+ +M
Sbjct: 323 VIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEH 366
C PNDVTF L+ R+ D VL + + +Y+ + + K E
Sbjct: 383 GSCSPNDVTFSYLLK---YSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEK 439
Query: 367 AMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFT 420
++W EM G P+ Y+ I GL +GK EA Y EM +KG +P T
Sbjct: 440 VREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 171/355 (48%), Gaps = 8/355 (2%)
Query: 172 NGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLL 231
+ + +N ++ L K+ ++ +VF + R+ + TY L++ ++DEAV +
Sbjct: 142 SSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVF 201
Query: 232 DEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLK-GCVPNEVTYNTLVDGLCR 290
+ + G + F+ L+ LC+ + A L + + GC + N +++G C
Sbjct: 202 ERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC--DIKAMNMILNGWCV 259
Query: 291 KGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYI 350
G +++A ++A+KC P+ V++GT+++ K+G+ + ++ + + I
Sbjct: 260 LGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKI 319
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
+++I L + + A+++++E+ EKG +PN V Y++L+ LC+ + ++ E + EM+
Sbjct: 320 CNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEME 379
Query: 411 NKGH--LPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGK 468
KG PN T+S L++ + D +V + M N C Y+++ + K
Sbjct: 380 LKGGSCSPNDVTFSYLLKYSQRSKDVD---IVLERMAKNKCEMTSDLYNLMFRLYVQWDK 436
Query: 469 LMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQP 523
+ +W +M G+ D Y+ IHG + + + F +M+ + +P
Sbjct: 437 EEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEP 491
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 165/370 (44%), Gaps = 30/370 (8%)
Query: 281 YNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLE 340
YN ++D L + + + + ++M N+ T+ L++ + + + V +
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 341 ERGHRGNEYIYSSLISGLFKEGKFEHAMQLW-KEMMEKGCEPNTVVYSALIDGLCREGKA 399
E G + + L+ L + E A L+ E GC+ + + +++G C G
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAM--NMILNGWCVLGNV 263
Query: 400 DEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHN-EVCYSI 458
EA+ + ++ P+ +Y +++ + G KA+ +++ M + N + ++C ++
Sbjct: 264 HEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNV 323
Query: 459 LINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQE 518
I+ LC ++ EA+ V++++ +G +VV Y+S++ C + ++ +L +M +
Sbjct: 324 -IDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Query: 519 AELQPDVATYNILLNAFYQQNNISRAMD-VLNIMLDQGCDPDFITCDIF--LKTLRDNMN 575
P+ T++ LL Y Q S+ +D VL M C+ +T D++ + L +
Sbjct: 383 GSCSPNDVTFSYLLK--YSQR--SKDVDIVLERMAKNKCE---MTSDLYNLMFRLYVQWD 435
Query: 576 PPQDGREFLDELVVR-LVKRQRT-------------IG-ASKIIEVMLDRCLLPEASTWA 620
+ RE E+ L QRT IG A + M+ + ++PE T
Sbjct: 436 KEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEM 495
Query: 621 IVVQQLCKPR 630
++ Q KPR
Sbjct: 496 LLNQNKTKPR 505
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 114/256 (44%), Gaps = 8/256 (3%)
Query: 319 LVHGFVKQGRASDGASVLIS---LEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM 375
LV V + R+ + ++S +++ H + +Y+ ++ L K +FE Q++ EM
Sbjct: 111 LVLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMS 170
Query: 376 EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCH 435
++ N Y L++ K DEA K G + + L+
Sbjct: 171 KRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVE 230
Query: 436 KA-ILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSM 494
A L + C+ + ++++NG C G + EA WK +++ + DVV+Y +M
Sbjct: 231 FAETLFCSRRREFGCDIKAM--NMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTM 288
Query: 495 IHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQ 554
I+ + + M+L+ M + PDV N +++A + I A++V + ++
Sbjct: 289 INALTKKGKLGKAMELYRAMW--DTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEK 346
Query: 555 GCDPDFITCDIFLKTL 570
G DP+ +T + LK L
Sbjct: 347 GPDPNVVTYNSLLKHL 362
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 194/434 (44%), Gaps = 38/434 (8%)
Query: 82 FASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFN 141
F + ++L + M + R EK F ++ + + + ++ +M+ +F K V +N
Sbjct: 174 FRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMK-KFGFKPRVFLYN 232
Query: 142 SVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHL 201
+++ +++ G+F AL Y K + TF +++K LCK G +++ +E+ + +
Sbjct: 233 RIMDALVKNGYFDLALAVYEDF-KEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRE 291
Query: 202 RNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIR 261
C PD + Y+ ++ L EG +D ++ + DEM+ + P+ + L+ LCK G + R
Sbjct: 292 NLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVER 351
Query: 262 AAKLVDNMSLK-----------------------------------GCVPNEVTYNTLVD 286
+L M K G + + YN ++
Sbjct: 352 GYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIK 411
Query: 287 GLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRG 346
GLC +++KA L + + P+ T ++ +V R SD ++VL + E G+
Sbjct: 412 GLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPV 471
Query: 347 NEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYL 406
++Y+ E K A+ ++ + KG + VY+ L++ L + G ++
Sbjct: 472 SDYLTQFFKLLCADEEKNAMALDVFYILKTKG-HGSVSVYNILMEALYKMGDIQKSLSLF 530
Query: 407 IEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKN 466
EM+ G P+S +YS + F E GD A +++ SC + Y L GLC+
Sbjct: 531 YEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQI 590
Query: 467 GKLMEAMMVWKQML 480
G++ M++ ++ L
Sbjct: 591 GEIDAVMLLVRECL 604
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 186/426 (43%), Gaps = 37/426 (8%)
Query: 165 KSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRI 224
K +P +N ++ AL K G D A+ V+ +S T+ L+ GLCK GRI
Sbjct: 220 KKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRI 279
Query: 225 DEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTL 284
+E + +L M+ P+ F + +I L +G+L + ++ D M P+ + Y TL
Sbjct: 280 EEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTL 339
Query: 285 VDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGH 344
V GLC+ G++ + L +M + + + + L+ GFV G+ ++ L + G+
Sbjct: 340 VVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGY 399
Query: 345 RGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALI-------------D 391
+ IY+++I GL + + A +L++ +E+ EP+ S ++ +
Sbjct: 400 IADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSN 459
Query: 392 GLCREGK-----------------ADE-----AREYLIEMKNKGHLPNSFTYSSLMRGFF 429
L R G+ ADE A + +K KGH S Y+ LM +
Sbjct: 460 VLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVS-VYNILMEALY 518
Query: 430 EAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVV 489
+ GD K++ ++ EM+ + YSI I + G + A ++++ +
Sbjct: 519 KMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIA 578
Query: 490 AYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLN 549
AY S+ G C +D M L + L E P Y + + + +N + M V++
Sbjct: 579 AYLSLTKGLCQIGEIDAVMLLVRECLGN-VESGPMEFKYALTVCHVCKGSNAEKVMKVVD 637
Query: 550 IMLDQG 555
M +G
Sbjct: 638 EMNQEG 643
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 166/385 (43%), Gaps = 32/385 (8%)
Query: 207 DSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV 266
D Y+ L + G A L + M +G P+ F +LI +R +
Sbjct: 157 DFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVY 216
Query: 267 DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQ 326
+ M G P YN ++D L + G + A+++ + V TF LV G K
Sbjct: 217 EKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKA 276
Query: 327 GRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVY 386
GR + +L + E + + + Y+++I L EG + ++++W EM +P+ + Y
Sbjct: 277 GRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAY 336
Query: 387 SALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKN 446
L+ GLC++G+ + E +EMK K L + Y L+ GF G A +W+++ +
Sbjct: 337 GTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVD 396
Query: 447 NSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLD-------VVAYSSM--IHG 497
+ + Y+ +I GLC ++ +A +++ + ++ D +VAY M +
Sbjct: 397 SGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSD 456
Query: 498 FCN--------AQLVDQGMKLFNQMLCQEAELQP---------------DVATYNILLNA 534
F N V + F ++LC + E V+ YNIL+ A
Sbjct: 457 FSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEA 516
Query: 535 FYQQNNISRAMDVLNIMLDQGCDPD 559
Y+ +I +++ + M G +PD
Sbjct: 517 LYKMGDIQKSLSLFYEMRKLGFEPD 541
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 197/444 (44%), Gaps = 14/444 (3%)
Query: 120 AVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLV 179
A FH + K ++N+ + + GHF RA + + S P+ F ++
Sbjct: 141 AAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHF-RAADQLPELMDSQGRPPSEKQFEIL 199
Query: 180 IK--ALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
I+ A + GL + V+ + P + Y+ +MD L K G D A+++ ++ + +
Sbjct: 200 IRMHADNRRGL--RVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKED 257
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G F +L+ LCK G + +++ M C P+ Y ++ L +G L+ +
Sbjct: 258 GLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDAS 317
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
+ + ++M ++ P+ + +GTLV G K GR G + + ++ + + IY LI G
Sbjct: 318 LRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEG 377
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
+GK A LW+++++ G + +Y+A+I GLC + D+A + + P+
Sbjct: 378 FVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPD 437
Query: 418 SFTYSSLMRGFF---EAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMM 474
T S +M + D + E+ ++ + +L KN ++
Sbjct: 438 FETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFY 497
Query: 475 VWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNA 534
+ K ++G V Y+ ++ + + + LF +M ++ +PD ++Y+I +
Sbjct: 498 ILK---TKG-HGSVSVYNILMEALYKMGDIQKSLSLFYEM--RKLGFEPDSSSYSIAICC 551
Query: 535 FYQQNNISRAMDVLNIMLDQGCDP 558
F ++ ++ A +++ C P
Sbjct: 552 FVEKGDVKAACSFHEKIIEMSCVP 575
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 132/291 (45%), Gaps = 2/291 (0%)
Query: 272 KGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASD 331
KG + YN L R G A L M + P++ F L+ R
Sbjct: 152 KGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLR 211
Query: 332 GASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALID 391
V +++ G + ++Y+ ++ L K G F+ A+ ++++ E G + + L+
Sbjct: 212 VYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVK 271
Query: 392 GLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNH 451
GLC+ G+ +E E L M+ P+ F Y+++++ G+ ++ VW EM+ +
Sbjct: 272 GLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKP 331
Query: 452 NEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLF 511
+ + Y L+ GLCK+G++ ++ +M + I +D Y +I GF V L+
Sbjct: 332 DVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLW 391
Query: 512 NQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
++ ++ D+ YN ++ N + +A + + +++ +PDF T
Sbjct: 392 EDLV--DSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFET 440
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 138/338 (40%), Gaps = 53/338 (15%)
Query: 118 EKAVNLFHRMEAEFHCKQTV---KSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGL 174
E+ LF M+ KQ + + + ++ + +G A + + S I G+
Sbjct: 350 ERGYELFMEMKG----KQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGI 405
Query: 175 TFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEM 234
+N VIK LC V VD+A ++F+ PD T S +M R+ + ++L+ +
Sbjct: 406 -YNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERI 464
Query: 235 QIEGTFPNPF----------------------------------VFNVLISALCKKGDLI 260
G + + V+N+L+ AL K GD+
Sbjct: 465 GELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQ 524
Query: 261 RAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLV 320
++ L M G P+ +Y+ + KG + A S +++ CVP+ + +L
Sbjct: 525 KSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLT 584
Query: 321 HGFVKQGRASDGASVLISLEERGHRGN------EYIYSSLISGLFKEGKFEHAMQLWKEM 374
G + G D +L+ R GN E+ Y+ + + K E M++ EM
Sbjct: 585 KGLCQIGEI-DAVMLLV----RECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEM 639
Query: 375 MEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK 412
++G N V+Y A+I G+ + G ARE E+K +
Sbjct: 640 NQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKR 677
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 97/194 (50%), Gaps = 3/194 (1%)
Query: 210 TYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNM 269
Y+ LM+ L K G I +++SL EM+ G P+ +++ I +KGD+ A + +
Sbjct: 509 VYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKI 568
Query: 270 SLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVAN-KCVPNDVTFGTLVHGFVKQGR 328
CVP+ Y +L GLC+ G+++ + L+ + + N + P + + V K
Sbjct: 569 IEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSN 628
Query: 329 ASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG--CEPNTVVY 386
A V+ + + G NE IY ++ISG+ K G + A +++ E+ ++ E + VVY
Sbjct: 629 AEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVY 688
Query: 387 SALIDGLCREGKAD 400
++ ++ AD
Sbjct: 689 EEMLIEQTKKKTAD 702
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 171/365 (46%), Gaps = 11/365 (3%)
Query: 138 KSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGL----TFNLVIKALCKVGLVDQAV 193
+++NS+++++ + R E V + + + GL TF + +KA +AV
Sbjct: 195 RTYNSMMSILAKT----RQFETMVSVLEEMGTK--GLLTMETFTIAMKAFAAAKERKKAV 248
Query: 194 EVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISAL 253
+F + T + L+D L + EA L D+++ T PN + VL++
Sbjct: 249 GIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFT-PNMMTYTVLLNGW 307
Query: 254 CKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPND 313
C+ +LI AA++ ++M G P+ V +N +++GL R K + A+ L + M + PN
Sbjct: 308 CRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNV 367
Query: 314 VTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKE 373
++ ++ F KQ + + G + + +Y+ LI+G + K + +L KE
Sbjct: 368 RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKE 427
Query: 374 MMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGD 433
M EKG P+ Y+ALI + + + +M P+ T++ +M+ +F A +
Sbjct: 428 MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARN 487
Query: 434 CHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSS 493
VW EM ++ Y++LI GL GK EA ++ML +G+K ++ Y+
Sbjct: 488 YEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNK 547
Query: 494 MIHGF 498
F
Sbjct: 548 FAADF 552
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 173/378 (45%), Gaps = 8/378 (2%)
Query: 59 WGSYKLG----DLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKA 114
W + + G ++ S++ LA + F ++ +L++M + + +E F + KA+ A
Sbjct: 183 WAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAA 241
Query: 115 HFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGL 174
+KAV +F M+ ++ K V++ N +L+ + + A + + + PN +
Sbjct: 242 KERKKAVGIFELMK-KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFT--PNMM 298
Query: 175 TFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEM 234
T+ +++ C+V + +A ++ + PD ++ +++GL + + +A+ L M
Sbjct: 299 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 358
Query: 235 QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKL 294
+ +G PN + ++I CK+ + A + D+M G P+ Y L+ G + KL
Sbjct: 359 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 418
Query: 295 NKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSL 354
+ LL +M P+ T+ L+ Q G + + + + + ++ +
Sbjct: 419 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 478
Query: 355 ISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGH 414
+ F +E +W EM++KG P+ Y+ LI GL EGK+ EA YL EM +KG
Sbjct: 479 MKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 538
Query: 415 LPNSFTYSSLMRGFFEAG 432
Y+ F G
Sbjct: 539 KTPLIDYNKFAADFHRGG 556
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 168/366 (45%), Gaps = 39/366 (10%)
Query: 205 APDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAK 264
A DS TY+++M L K + + VS+L+EM +G F + + A + +A
Sbjct: 191 AHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVG 249
Query: 265 LVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFV 324
+ + M T N L+D L R KL K +L + + PN +T+ L++G+
Sbjct: 250 IFELMKKYKFKIGVETINCLLDSLGR-AKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWC 308
Query: 325 KQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTV 384
+ +LI A ++W +M++ G +P+ V
Sbjct: 309 R-------------------------VRNLI----------EAARIWNDMIDHGLKPDIV 333
Query: 385 VYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEM 444
++ +++GL R K +A + MK+KG PN +Y+ ++R F + AI + +M
Sbjct: 334 AHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 393
Query: 445 KNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLV 504
++ + Y+ LI G KL + K+M +G D Y+++I N ++
Sbjct: 394 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 453
Query: 505 DQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCD 564
+ G +++N+M+ + E++P + T+N+++ +++ N V + M+ +G PD +
Sbjct: 454 EHGTRIYNKMI--QNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYT 511
Query: 565 IFLKTL 570
+ ++ L
Sbjct: 512 VLIRGL 517
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 155/356 (43%), Gaps = 64/356 (17%)
Query: 340 EERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGC---EPNTVVYSA-------- 388
E +G + Y+S++S L K +FE + + +EM KG E T+ A
Sbjct: 186 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERK 245
Query: 389 -----------------------LIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
L+D L R EA+ ++K + PN TY+ L+
Sbjct: 246 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLL 304
Query: 426 RGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIK 485
G+ + +A +W +M ++ + V +++++ GL ++ K +A+ ++ M S+G
Sbjct: 305 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 364
Query: 486 LDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAM 545
+V +Y+ MI FC ++ ++ F+ M+ ++ LQPD A Y L+ F Q +
Sbjct: 365 PNVRSYTIMIRDFCKQSSMETAIEYFDDMV--DSGLQPDAAVYTCLITGFGTQKKLDTVY 422
Query: 546 DVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVR--------------- 590
++L M ++G PD T + +K L N P+ G ++++
Sbjct: 423 ELLKEMQEKGHPPDGKTYNALIK-LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKS 481
Query: 591 -LVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAISECWSRLCC 645
V R +G + + + M+ + + P+ +++ ++ IR ISE SR C
Sbjct: 482 YFVARNYEMGRA-VWDEMIKKGICPDDNSYTVL---------IRGLISEGKSREAC 527
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 171/365 (46%), Gaps = 11/365 (3%)
Query: 138 KSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGL----TFNLVIKALCKVGLVDQAV 193
+++NS+++++ + R E V + + + GL TF + +KA +AV
Sbjct: 196 RTYNSMMSILAKT----RQFETMVSVLEEMGTK--GLLTMETFTIAMKAFAAAKERKKAV 249
Query: 194 EVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISAL 253
+F + T + L+D L + EA L D+++ T PN + VL++
Sbjct: 250 GIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFT-PNMMTYTVLLNGW 308
Query: 254 CKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPND 313
C+ +LI AA++ ++M G P+ V +N +++GL R K + A+ L + M + PN
Sbjct: 309 CRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNV 368
Query: 314 VTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKE 373
++ ++ F KQ + + G + + +Y+ LI+G + K + +L KE
Sbjct: 369 RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKE 428
Query: 374 MMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGD 433
M EKG P+ Y+ALI + + + +M P+ T++ +M+ +F A +
Sbjct: 429 MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARN 488
Query: 434 CHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSS 493
VW EM ++ Y++LI GL GK EA ++ML +G+K ++ Y+
Sbjct: 489 YEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNK 548
Query: 494 MIHGF 498
F
Sbjct: 549 FAADF 553
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 173/378 (45%), Gaps = 8/378 (2%)
Query: 59 WGSYKLG----DLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKA 114
W + + G ++ S++ LA + F ++ +L++M + + +E F + KA+ A
Sbjct: 184 WAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAA 242
Query: 115 HFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGL 174
+KAV +F M+ ++ K V++ N +L+ + + A + + + PN +
Sbjct: 243 KERKKAVGIFELMK-KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFT--PNMM 299
Query: 175 TFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEM 234
T+ +++ C+V + +A ++ + PD ++ +++GL + + +A+ L M
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 359
Query: 235 QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKL 294
+ +G PN + ++I CK+ + A + D+M G P+ Y L+ G + KL
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 295 NKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSL 354
+ LL +M P+ T+ L+ Q G + + + + + ++ +
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 479
Query: 355 ISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGH 414
+ F +E +W EM++KG P+ Y+ LI GL EGK+ EA YL EM +KG
Sbjct: 480 MKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539
Query: 415 LPNSFTYSSLMRGFFEAG 432
Y+ F G
Sbjct: 540 KTPLIDYNKFAADFHRGG 557
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 167/366 (45%), Gaps = 39/366 (10%)
Query: 205 APDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAK 264
A S TY+++M L K + + VS+L+EM +G F + + A + +A
Sbjct: 192 AHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVG 250
Query: 265 LVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFV 324
+ + M T N L+D L R KL K +L + + PN +T+ L++G+
Sbjct: 251 IFELMKKYKFKIGVETINCLLDSLGR-AKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWC 309
Query: 325 KQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTV 384
+ +LI A ++W +M++ G +P+ V
Sbjct: 310 R-------------------------VRNLI----------EAARIWNDMIDHGLKPDIV 334
Query: 385 VYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEM 444
++ +++GL R K +A + MK+KG PN +Y+ ++R F + AI + +M
Sbjct: 335 AHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 445 KNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLV 504
++ + Y+ LI G KL + K+M +G D Y+++I N ++
Sbjct: 395 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 454
Query: 505 DQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCD 564
+ G +++N+M+ + E++P + T+N+++ +++ N V + M+ +G PD +
Sbjct: 455 EHGTRIYNKMI--QNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYT 512
Query: 565 IFLKTL 570
+ ++ L
Sbjct: 513 VLIRGL 518
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 154/356 (43%), Gaps = 64/356 (17%)
Query: 340 EERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGC---EPNTVVYSA-------- 388
E +G Y+S++S L K +FE + + +EM KG E T+ A
Sbjct: 187 ERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERK 246
Query: 389 -----------------------LIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
L+D L R EA+ ++K + PN TY+ L+
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLL 305
Query: 426 RGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIK 485
G+ + +A +W +M ++ + V +++++ GL ++ K +A+ ++ M S+G
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 365
Query: 486 LDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAM 545
+V +Y+ MI FC ++ ++ F+ M+ ++ LQPD A Y L+ F Q +
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMV--DSGLQPDAAVYTCLITGFGTQKKLDTVY 423
Query: 546 DVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVR--------------- 590
++L M ++G PD T + +K L N P+ G ++++
Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIK-LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKS 482
Query: 591 -LVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAISECWSRLCC 645
V R +G + + + M+ + + P+ +++ ++ IR ISE SR C
Sbjct: 483 YFVARNYEMGRA-VWDEMIKKGICPDDNSYTVL---------IRGLISEGKSREAC 528
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 200/465 (43%), Gaps = 7/465 (1%)
Query: 96 RRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHR 155
R+ + F + YGKA A NLF M TV +FN++++ GH
Sbjct: 300 RKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTV-TFNTMIHTCGTHGHLSE 358
Query: 156 ALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLM 215
A + + I P+ T+N+++ G ++ A+E +R I PD+ T+ ++
Sbjct: 359 AESLLKKM-EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVL 417
Query: 216 DGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCV 275
LC+ + E +++ EM + V++ +G +++A L + L CV
Sbjct: 418 HILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLD-CV 476
Query: 276 PNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDV-TFGTLVHGFVKQGRASDGAS 334
+ T ++D KG +A ++ NDV + ++ + K S
Sbjct: 477 LSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALS 536
Query: 335 VLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLC 394
+ ++ +G +E Y+SL L + A ++ EM++ GC+P Y+A+I
Sbjct: 537 LFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYV 596
Query: 395 REGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEV 454
R G +A + M+ G PN Y SL+ GF E+G +AI ++ M+ + N +
Sbjct: 597 RLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHI 656
Query: 455 CYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
+ LI K G L EA V+ +M DV A +SM+ + +V + +FN +
Sbjct: 657 VLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNAL 716
Query: 515 LCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
+ DV ++ ++ + + A++V M + G D
Sbjct: 717 ---REKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSD 758
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/540 (21%), Positives = 229/540 (42%), Gaps = 41/540 (7%)
Query: 52 FKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAY 111
F SGS +F +LI+ + L +M + F +
Sbjct: 291 FASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTC 350
Query: 112 GKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQP 171
G +A +L +ME E K++N +L++ G ALE+Y + K + + P
Sbjct: 351 GTHGHLSEAESLLKKME-EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRK-VGLFP 408
Query: 172 NGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLL 231
+ +T V+ LC+ +V + V + + D ++ +M EG + +A +L
Sbjct: 409 DTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALF 468
Query: 232 DEMQIE-----------------------------------GTFPNPFVFNVLISALCKK 256
+ Q++ G + +NV+I A K
Sbjct: 469 ERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKA 528
Query: 257 GDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTF 316
+A L M +G P+E TYN+L L +++A +L +M+ + C P T+
Sbjct: 529 KLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTY 588
Query: 317 GTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMME 376
++ +V+ G SD + ++E+ G + NE +Y SLI+G + G E A+Q ++ M E
Sbjct: 589 AAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEE 648
Query: 377 KGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHK 436
G + N +V ++LI + G +EAR +MK+ P+ +S++ + G +
Sbjct: 649 HGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSE 708
Query: 437 AILVWKEMK-NNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
A ++ ++ +C + + ++ ++ G L EA+ V ++M G+ D +++ ++
Sbjct: 709 AESIFNALREKGTC--DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVM 766
Query: 496 HGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQG 555
+ + + +LF++ML E +L D T+ L + S A+ L ++
Sbjct: 767 ACYAADGQLSECCELFHEMLV-ERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEA 825
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/467 (22%), Positives = 194/467 (41%), Gaps = 61/467 (13%)
Query: 149 QEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDS 208
++ + R L + + PN + +N+V++AL + G D+ + + P +
Sbjct: 121 EQTRWERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTN 180
Query: 209 YTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKL--- 265
TY L+D K G + EA+ + M FP+ ++ G+ RA +
Sbjct: 181 NTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKG 240
Query: 266 ------------VDNMSLKGCVPNEV---------------------------------- 279
+D+ G + V
Sbjct: 241 WCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPR 300
Query: 280 ------TYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGA 333
T+NTL+D + G+LN A +L ++M+ + + VTF T++H G S+
Sbjct: 301 KPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAE 360
Query: 334 SVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGL 393
S+L +EE+G + Y+ L+S G E A++ ++++ + G P+TV + A++ L
Sbjct: 361 SLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHIL 420
Query: 394 CREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNE 453
C+ E + EM + + +M+ + G +A +++ + + C +
Sbjct: 421 CQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLD-CVLSS 479
Query: 454 VCYSILINGLCKNGKLMEAMMVW--KQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLF 511
+ +I+ + G +EA V+ K+ +S G + DV+ Y+ MI + A+L ++ + LF
Sbjct: 480 TTLAAVIDVYAEKGLWVEAETVFYGKRNMS-GQRNDVLEYNVMIKAYGKAKLHEKALSLF 538
Query: 512 NQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDP 558
M Q PD TYN L + + A +L MLD GC P
Sbjct: 539 KGMKNQGT--WPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKP 583
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 129/306 (42%), Gaps = 27/306 (8%)
Query: 270 SLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRA 329
S + VPN + YN ++ L R GK ++ +M N +P + T+G LV + K G
Sbjct: 137 SHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLV 196
Query: 330 SDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSAL 389
+ + + +R H +E ++++ G+F+ A + +K
Sbjct: 197 KEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFK----------------- 239
Query: 390 IDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMR-GFFEAG--DCHKAILVWKEMKN 446
G C GK D + + + G + + F+ G + + L + +
Sbjct: 240 --GWC-AGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSD 296
Query: 447 NSCNHNEVC--YSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLV 504
+S + ++ LI+ K G+L +A ++ +ML G+ +D V +++MIH +
Sbjct: 297 SSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHL 356
Query: 505 DQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCD 564
+ L +M +E + PD TYNILL+ +I A++ + G PD +T
Sbjct: 357 SEAESLLKKM--EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHR 414
Query: 565 IFLKTL 570
L L
Sbjct: 415 AVLHIL 420
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/377 (20%), Positives = 153/377 (40%), Gaps = 37/377 (9%)
Query: 102 KNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYS 161
K + + +Y + AV+L+ ME + K + S++N + G A++++
Sbjct: 586 KTYAAMIASYVRLGLLSDAVDLYEAME-KTGVKPNEVVYGSLINGFAESGMVEEAIQYF- 643
Query: 162 HVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKE 221
+ + +Q N + +IKA KVG +++A V+ + PD ++++
Sbjct: 644 RMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADL 703
Query: 222 GRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTY 281
G + EA S+ + ++ +GT + F ++ G L A ++ + M G + + ++
Sbjct: 704 GIVSEAESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSF 762
Query: 282 NTLVDGLCRKGKLNKAVSLLNQM-VANKCVPNDVTFGTLVHGFVKQGRASDGASVL---- 336
N ++ G+L++ L ++M V K + + TF TL K G S+ S L
Sbjct: 763 NQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAY 822
Query: 337 -----------------------ISLEE-----RGHRGNE-YIYSSLISGLFKEGKFEHA 367
+LE G E + Y+++I G + A
Sbjct: 823 NEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMA 882
Query: 368 MQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRG 427
++ + M EKG EP+ V + L+ + G + + + P+ + ++
Sbjct: 883 LKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDA 942
Query: 428 FFEAGDCHKAILVWKEM 444
+ A A +V KEM
Sbjct: 943 YVSANRQDLADVVKKEM 959
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 145/293 (49%), Gaps = 2/293 (0%)
Query: 280 TYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISL 339
TY T+V L R + + LL++MV + C PN VT+ L+H + + + +V +
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 340 EERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKA 399
+E G + Y +LI K G + AM +++ M E G P+T YS +I+ L + G
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 400 DEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSIL 459
A EM +G PN T++ ++ +A + A+ ++++M+N ++V YSI+
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIV 540
Query: 460 INGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEA 519
+ L G L EA V+ +M + D Y ++ + A VD+ + + ML +A
Sbjct: 541 MEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAML--QA 598
Query: 520 ELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRD 572
L+P+V T N LL+ F + + +S A ++L ML G P T + L D
Sbjct: 599 GLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTD 651
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 138/289 (47%), Gaps = 2/289 (0%)
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM 304
+ ++ L + KL+D M GC PN VTYN L+ R L +A+++ NQM
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 305 VANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKF 364
C P+ VT+ TL+ K G + ++E G + + YS +I+ L K G
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 365 EHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSL 424
A +L+ EM+ +GC PN V ++ +I + + A + +M+N G P+ TYS +
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIV 540
Query: 425 MRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGI 484
M G +A V+ EM+ + +E Y +L++ K G + +A ++ ML G+
Sbjct: 541 MEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGL 600
Query: 485 KLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLN 533
+ +V +S++ F + + L ML L P + TY +LL+
Sbjct: 601 RPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLA--LGLHPSLQTYTLLLS 647
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 165/375 (44%), Gaps = 35/375 (9%)
Query: 99 FIEKNFIVIFKAYGKAHFPEKAV-NLFHRMEAEFHCKQTVKSFNSVLNVI---------- 147
++ +N I + + H E+A+ N RM+A + Q +K ++ N +
Sbjct: 295 YVVENVSSILRRFKWGHAAEEALHNFGFRMDA-YQANQVLKQMDNYANALGFFYWLKRQP 353
Query: 148 --IQEGHFH--------RALEFYSHVCKSLN------IQPNGLTFNLVIKALCKVGLVDQ 191
+GH + RA +F + K L+ +PN +T+N +I + + + +
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQF-GEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKE 412
Query: 192 AVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLIS 251
A+ VF + C PD TY TL+D K G +D A+ + MQ G P+ F ++V+I+
Sbjct: 413 AMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIIN 472
Query: 252 ALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVP 311
L K G L A +L M +GC PN VT+N ++ + A+ L M P
Sbjct: 473 CLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQP 532
Query: 312 NDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLW 371
+ VT+ ++ G + V ++ + +E +Y L+ K G + A Q +
Sbjct: 533 DKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWY 592
Query: 372 KEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM------ 425
+ M++ G PN ++L+ R + EA L M G P+ TY+ L+
Sbjct: 593 QAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDA 652
Query: 426 RGFFEAGDCHKAILV 440
R F+ G C + + V
Sbjct: 653 RSNFDMGFCGQLMAV 667
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 37/265 (13%)
Query: 341 ERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
+ G + + + Y++++ L + +F +L EM+ GC+PNTV Y+ LI R
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 401 EAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILI 460
EA +M+ G P+ TY +L+ +AG A+ +++ M+ + + YS++I
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 461 NGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAE 520
N L K G L A ++ +M+ +G ++V ++ MI A+ + +KL+ M Q A
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDM--QNAG 529
Query: 521 LQPDVATYNI-----------------------------------LLNAFYQQNNISRAM 545
QPD TY+I L++ + + N+ +A
Sbjct: 530 FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAW 589
Query: 546 DVLNIMLDQGCDPDFITCDIFLKTL 570
ML G P+ TC+ L T
Sbjct: 590 QWYQAMLQAGLRPNVPTCNSLLSTF 614
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 451 HNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKL 510
H+ Y+ ++ L + + E + +M+ G K + V Y+ +IH + A + + M +
Sbjct: 357 HDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNV 416
Query: 511 FNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
FNQM QEA +PD TY L++ + + AMD+ M + G PD T + + L
Sbjct: 417 FNQM--QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCL 474
Query: 571 RDNMNPPQDGREFLD-------------ELVVRLVKRQRTI-GASKIIEVMLDRCLLPEA 616
+ P R F + +++ L + R A K+ M + P+
Sbjct: 475 GKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDK 534
Query: 617 STWAIVVQQL 626
T++IV++ L
Sbjct: 535 VTYSIVMEVL 544
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 147/296 (49%), Gaps = 3/296 (1%)
Query: 175 TFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLC-KEGR-IDEAVSLLD 232
T+ ++I + GL + A+ F+ + P S T+ L+ LC K+GR ++EA
Sbjct: 715 TWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFR 774
Query: 233 EMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKG 292
EM G P+ + + LC+ G+ A +D++ G P V Y+ + LCR G
Sbjct: 775 EMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIG-FPVTVAYSIYIRALCRIG 833
Query: 293 KLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYS 352
KL +A+S L + + + T+G++VHG +++G + S++E G + ++Y+
Sbjct: 834 KLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYT 893
Query: 353 SLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK 412
SLI FKE + E ++ ++M + CEP+ V Y+A+I G GK +EA M+ +
Sbjct: 894 SLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEER 953
Query: 413 GHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGK 468
G P+ TYS + +A A+ + EM + + + + + GL + GK
Sbjct: 954 GTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGK 1009
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 171/373 (45%), Gaps = 8/373 (2%)
Query: 52 FKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAY 111
F S K YK ++ I+ DF + L +M+R+ + + + ++ Y
Sbjct: 664 FFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQY 723
Query: 112 GKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEG--HFHRALEFYSHVCKSLNI 169
G+ A+ F M+ + + +F ++ V+ ++ + A + + +S
Sbjct: 724 GRTGLTNIAIRTFKEMK-DMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRS-GF 781
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVS 229
P+ + LC+VG A + + P + YS + LC+ G+++EA+S
Sbjct: 782 VPDRELVQDYLGCLCEVGNTKDAKSCLDSLG-KIGFPVTVAYSIYIRALCRIGKLEEALS 840
Query: 230 LLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
L + E + + + + ++ L ++GDL +A V++M G P Y +L+
Sbjct: 841 ELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFF 900
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEY 349
++ +L K + +M C P+ VT+ ++ G++ G+ + + ++EERG +
Sbjct: 901 KEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFK 960
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
YS I+ L + K E A++L EM++KG P+T+ + + GL REGK D AR I +
Sbjct: 961 TYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLAR---IAL 1017
Query: 410 KNKGHLPNSFTYS 422
+ K L T S
Sbjct: 1018 QKKSALVAQRTVS 1030
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 160/336 (47%), Gaps = 2/336 (0%)
Query: 133 CKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQA 192
C + ++++ +++V + + L + + KS + + +N++I++LC G D A
Sbjct: 220 CDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKS-GFELDATAYNIMIRSLCIAGRGDLA 278
Query: 193 VEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISA 252
+E ++ + + TY L+D + K ++D S+ D+M F L+ +
Sbjct: 279 LEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKS 338
Query: 253 LCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPN 312
C G + A +L+ + K + + LV GLCR ++ A+ +++ M K +
Sbjct: 339 FCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDS 398
Query: 313 DVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWK 372
+V +G ++ G+++Q S +++ G Y+ ++ LFK +FE L+
Sbjct: 399 NV-YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFN 457
Query: 373 EMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAG 432
EM+E G EP++V +A++ G + + EA + M+ KG P +YS ++ +
Sbjct: 458 EMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSS 517
Query: 433 DCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGK 468
+ I ++ +M + + +S +I+ + KNG+
Sbjct: 518 RYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGE 553
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 152/344 (44%), Gaps = 3/344 (0%)
Query: 157 LEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMD 216
L F+S V K + N +N+ IK Q +F + + C T++ ++
Sbjct: 662 LRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIM 721
Query: 217 GLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALC-KKG-DLIRAAKLVDNMSLKGC 274
+ G + A+ EM+ G P+ F LI+ LC KKG ++ A + M G
Sbjct: 722 QYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGF 781
Query: 275 VPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGAS 334
VP+ + LC G A S L+ + P V + + + G+ + S
Sbjct: 782 VPDRELVQDYLGCLCEVGNTKDAKSCLDSL-GKIGFPVTVAYSIYIRALCRIGKLEEALS 840
Query: 335 VLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLC 394
L S E ++Y Y S++ GL + G + A+ M E G +P VY++LI
Sbjct: 841 ELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFF 900
Query: 395 REGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEV 454
+E + ++ E +M+ + P+ TY++++ G+ G +A ++ M+ + +
Sbjct: 901 KEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFK 960
Query: 455 CYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGF 498
YS IN LC+ K +A+ + +ML +GI + + ++ +G
Sbjct: 961 TYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGL 1004
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 170/379 (44%), Gaps = 5/379 (1%)
Query: 154 HRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYST 213
H A+ F++ V + +N ++ + +D E+ + C D T++
Sbjct: 170 HLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTI 229
Query: 214 LMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALC--KKGDLIRAAKLVDNMSL 271
L+ K +I + + + ++M+ G + +N++I +LC +GDL A + M
Sbjct: 230 LISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDL--ALEFYKEMME 287
Query: 272 KGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASD 331
KG TY L+D + + K++ S+ + MV + FG L+ F G+ +
Sbjct: 288 KGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKE 347
Query: 332 GASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALID 391
++ L+ + + + L+ GL + + A+++ ++M++ ++ VY +I
Sbjct: 348 ALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIV-DIMKRRKLDDSNVYGIIIS 406
Query: 392 GLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNH 451
G R+ +A E +K G P TY+ +M+ F+ K ++ EM N
Sbjct: 407 GYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEP 466
Query: 452 NEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLF 511
+ V + ++ G ++ EA V+ M +GIK +YS + C + D+ +K+F
Sbjct: 467 DSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIF 526
Query: 512 NQMLCQEAELQPDVATYNI 530
NQM + ++ D+ ++ I
Sbjct: 527 NQMHASKIVIRDDIFSWVI 545
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 154/348 (44%), Gaps = 24/348 (6%)
Query: 281 YNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLE 340
YNT++ L+ L+++M N C + T+ L+ + K + G V +
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 341 ERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
+ G + Y+ +I L G+ + A++ +KEMMEKG Y L+D + + K D
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD 311
Query: 401 EAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILI 460
+ +M + + L++ F +G +A+ + +E+KN + + IL+
Sbjct: 312 VVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILV 371
Query: 461 NGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAE 520
GLC+ ++++A+ + M R + D Y +I G+ V + ++ F + +++
Sbjct: 372 KGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIISGYLRQNDVSKALEQFE--VIKKSG 428
Query: 521 LQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDG 580
P V+TY ++ ++ + ++ N M++ G +PD +
Sbjct: 429 RPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVA------------------ 470
Query: 581 REFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCK 628
+ +V + + R A K+ M ++ + P +++I V++LC+
Sbjct: 471 ---ITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCR 515
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 136/322 (42%), Gaps = 5/322 (1%)
Query: 242 NPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLL 301
N +N+ I D + L M +GC+ + T+ ++ R G N A+
Sbjct: 677 NSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTF 736
Query: 302 NQMVANKCVPNDVTFGTLVHGFV-KQGRASDGAS-VLISLEERGHRGNEYIYSSLISGLF 359
+M +P+ TF L+ K+GR + A+ + G + + + L
Sbjct: 737 KEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLC 796
Query: 360 KEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSF 419
+ G + A + + G P TV YS I LCR GK +EA L + + L + +
Sbjct: 797 EVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQY 855
Query: 420 TYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM 479
TY S++ G + GD KA+ MK Y+ LI K +L + + ++M
Sbjct: 856 TYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKM 915
Query: 480 LSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQN 539
+ VV Y++MI G+ + V++ F M +E PD TY+ +N Q
Sbjct: 916 EGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNM--EERGTSPDFKTYSKFINCLCQAC 973
Query: 540 NISRAMDVLNIMLDQGCDPDFI 561
A+ +L+ MLD+G P I
Sbjct: 974 KSEDALKLLSEMLDKGIAPSTI 995
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/387 (19%), Positives = 166/387 (42%), Gaps = 57/387 (14%)
Query: 56 SHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAH 115
SH+ G Y +++ + + ++EL+ +M++ + + ++ YGKA
Sbjct: 186 SHRVGIYN-------TMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAK 238
Query: 116 FPEKAVNLFHRM-EAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGL 174
K + +F +M ++ F T ++N ++ + G ALEFY + G+
Sbjct: 239 KIGKGLLVFEKMRKSGFELDAT--AYNIMIRSLCIAGRGDLALEFYKE------MMEKGI 290
Query: 175 TFNL----------------------------------------VIKALCKVGLVDQAVE 194
TF L ++K+ C G + +A+E
Sbjct: 291 TFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALE 350
Query: 195 VFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALC 254
+ R + + D+ + L+ GLC+ R+ +A+ ++D M+ + V+ ++IS
Sbjct: 351 LIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMK-RRKLDDSNVYGIIISGYL 409
Query: 255 KKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDV 314
++ D+ +A + + + G P TY ++ L + + K +L N+M+ N P+ V
Sbjct: 410 RQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSV 469
Query: 315 TFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEM 374
+V G + Q R ++ V S+EE+G + YS + L + +++ ++++ +M
Sbjct: 470 AITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQM 529
Query: 375 MEKGCEPNTVVYSALIDGLCREGKADE 401
++S +I + + G+ ++
Sbjct: 530 HASKIVIRDDIFSWVISSMEKNGEKEK 556
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 157/343 (45%), Gaps = 36/343 (10%)
Query: 73 IEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFH 132
+ +LAA+ F +EE+L++ + + E I YG+ E A +F M E +
Sbjct: 78 VRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEM-PERN 136
Query: 133 CKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQA 192
CK+T SFN++LN + F + + L+I+P
Sbjct: 137 CKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEP--------------------- 175
Query: 193 VEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISA 252
D +Y+TL+ GLC +G EAV+L+DE++ +G P+ FN+L+
Sbjct: 176 --------------DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHE 221
Query: 253 LCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPN 312
KG ++ M K + +YN + GL + K + VSL +++ N+ P+
Sbjct: 222 SYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPD 281
Query: 313 DVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWK 372
TF ++ GFV +G+ + + +E+ G R +++++SL+ + K G E A +L K
Sbjct: 282 VFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCK 341
Query: 373 EMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL 415
E+ K + V ++D L + K DEA E + K +L
Sbjct: 342 EIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVELAKTNDYL 384
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 128/263 (48%), Gaps = 1/263 (0%)
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK 308
+I+ + G A K+ D M + C +++N L++ K + + ++
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 309 CVPNDV-TFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHA 367
+ DV ++ TL+ G +G ++ +++ +E +G + + ++ L+ + +GKFE
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 368 MQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRG 427
Q+W M+EK + + Y+A + GL E K++E ++K P+ FT++++++G
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKG 291
Query: 428 FFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLD 487
F G +AI +KE++ N C + ++ L+ +CK G L A + K++ ++ + +D
Sbjct: 292 FVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVD 351
Query: 488 VVAYSSMIHGFCNAQLVDQGMKL 510
++ D+ ++
Sbjct: 352 EAVLQEVVDALVKGSKQDEAEEI 374
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 125/255 (49%), Gaps = 7/255 (2%)
Query: 222 GRIDEAVSLLDEMQIEGTFPNPFVFNVLISAL--CKKGDLIRA--AKLVDNMSLKGCVPN 277
G + A + DEM FN L++A KK DL+ +L +S++ P+
Sbjct: 120 GMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIE---PD 176
Query: 278 EVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLI 337
+YNTL+ GLC KG +AV+L++++ P+ +TF L+H +G+ +G +
Sbjct: 177 VASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWA 236
Query: 338 SLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREG 397
+ E+ + + Y++ + GL E K E + L+ ++ +P+ ++A+I G EG
Sbjct: 237 RMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEG 296
Query: 398 KADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYS 457
K DEA + E++ G P F ++SL+ +AGD A + KE+ +E
Sbjct: 297 KLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQ 356
Query: 458 ILINGLCKNGKLMEA 472
+++ L K K EA
Sbjct: 357 EVVDALVKGSKQDEA 371
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 109/230 (47%), Gaps = 3/230 (1%)
Query: 319 LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEK- 377
+++ + + G + V + ER + +++L++ KF+ ++KE+ K
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 378 GCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKA 437
EP+ Y+ LI GLC +G EA + E++NKG P+ T++ L+ + G +
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 438 ILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHG 497
+W M + + Y+ + GL K E + ++ ++ +K DV +++MI G
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKG 291
Query: 498 FCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDV 547
F + +D+ + + ++ ++ +P +N LL A + ++ A ++
Sbjct: 292 FVSEGKLDEAITWYKEI--EKNGCRPLKFVFNSLLPAICKAGDLESAYEL 339
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 193/439 (43%), Gaps = 62/439 (14%)
Query: 155 RALEFYSHVCKSL--NIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYS 212
+ L+F+ C SL + + ++ + + +C+ GL+ + ++ + D
Sbjct: 73 KKLDFF-RWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAK 131
Query: 213 TLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV------ 266
L+D L + G+ + A+ +LD M+ G NP V++ ++ AL KK +L A ++
Sbjct: 132 ILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEA 191
Query: 267 -DNMS--------LKGCVPNEVTYNTLVDGLCRK-------------------------- 291
DN S + +P V N L+ GL R
Sbjct: 192 SDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSY 251
Query: 292 ----------GKLNKAVSLLNQMVANKCV------PNDVTFGTLVHGFVKQGRASDGASV 335
G L+ A+SL +M V P+ T+ +L+H G+A D V
Sbjct: 252 NICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIV 311
Query: 336 LISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCR 395
L+ GH + Y LI G K + + AM+++ EM G P+T+VY+ L+DG +
Sbjct: 312 WDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLK 371
Query: 396 EGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVC 455
K EA + +M +G + +TY+ L+ G F G ++ ++K + +
Sbjct: 372 ARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAIT 431
Query: 456 YSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
+SI+ LC+ GKL A+ + ++M +RG +D+V SS++ GF D KL +
Sbjct: 432 FSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHI- 490
Query: 516 CQEAELQPDVATYNILLNA 534
+E L P+V +N + A
Sbjct: 491 -REGNLVPNVLRWNAGVEA 508
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 132/566 (23%), Positives = 238/566 (42%), Gaps = 82/566 (14%)
Query: 80 SDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQT--- 136
S+F + E L+ MKR + F ++ + +G + A++LF M+ +
Sbjct: 229 SEFKRVFEKLKGMKRFK--FDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFG 286
Query: 137 --VKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVE 194
+ ++NS+++V+ G AL + + K +P+ T+ ++I+ CK +D A+
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDEL-KVSGHEPDNSTYRILIQGCCKSYRMDDAMR 345
Query: 195 VFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISAL- 253
++ + PD+ Y+ L+DG K ++ EA L ++M EG + + +N+LI L
Sbjct: 346 IYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLF 405
Query: 254 ----------------------------------CKKGDLIRAAKLVDNMSLKGCVPNEV 279
C++G L A KLV+ M +G + V
Sbjct: 406 RNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLV 465
Query: 280 TYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVK--QGRASDGASVLI 337
T ++L+ G ++G+ + L+ + VPN + + V +K Q + D +
Sbjct: 466 TISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFP 525
Query: 338 S----LEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGL 393
S L+ G+E +S E + ++ + +P + L G
Sbjct: 526 SKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLF--GLARGQ 583
Query: 394 CREGKADEAREYLIEMKN--------KGHLP-----------------NSFTYSSLMRGF 428
E K D + ++M N KG L S+TY+S+M F
Sbjct: 584 RVEAKPDS---FDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSF 640
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
+ G A V +M N C + Y+++I GL K G+ A V ++ +G LD+
Sbjct: 641 VKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDI 700
Query: 489 VAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL 548
V Y+++I+ A +D+ +LF+ M + + PDV +YN ++ + + A L
Sbjct: 701 VMYNTLINALGKATRLDEATQLFDHM--KSNGINPDVVSYNTMIEVNSKAGKLKEAYKYL 758
Query: 549 NIMLDQGCDPDFITCDIFLKTLRDNM 574
MLD GC P+ +T D L L M
Sbjct: 759 KAMLDAGCLPNHVT-DTILDYLGKEM 783
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 156/368 (42%), Gaps = 38/368 (10%)
Query: 279 VTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLIS 338
Y+ + +CR G L + LL M + + L+ ++ G+ VL
Sbjct: 93 TAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDY 152
Query: 339 LEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCE---------------PNT 383
+EE G N +Y S++ L K+ + A+ + +++E P T
Sbjct: 153 MEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGT 212
Query: 384 VVYSALIDGLCREGKADEAREYLIEMKNKGHLP-NSFTYSSLMRGFFEAGDCHKAILVWK 442
V + L+ GL R E + ++K ++++Y+ + GF GD A+ ++K
Sbjct: 213 VAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFK 272
Query: 443 EMKNNSCNHN-----EVC-YSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIH 496
EMK S + ++C Y+ LI+ LC GK +A++VW ++ G + D Y +I
Sbjct: 273 EMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQ 332
Query: 497 GFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGC 556
G C + +D M+++ +M Q PD YN LL+ + ++ A + M+ +G
Sbjct: 333 GCCKSYRMDDAMRIYGEM--QYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGV 390
Query: 557 DPDFITCDIFLKTLRDNMNPP---------QDGREFLDELVVRLVKRQ-----RTIGASK 602
T +I + L N + +F+D + +V Q + GA K
Sbjct: 391 RASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVK 450
Query: 603 IIEVMLDR 610
++E M R
Sbjct: 451 LVEEMETR 458
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 20/246 (8%)
Query: 343 GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
G++ + YS + + + G L M E G + + L+D L R GK + A
Sbjct: 87 GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESA 146
Query: 403 REYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNE--------- 453
L M+ G N Y S++ + + A+ + ++ S NH++
Sbjct: 147 LGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIV 206
Query: 454 ------VCYSILINGLCKNGKLMEAMMVWKQMLS-RGIKLDVVAYSSMIHGFCNAQLVDQ 506
V + L+ GL + E V++++ + K D +Y+ IHGF +D
Sbjct: 207 SYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDA 266
Query: 507 GMKLFNQMLCQE----AELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
+ LF +M + + PD+ TYN L++ A+ V + + G +PD T
Sbjct: 267 ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNST 326
Query: 563 CDIFLK 568
I ++
Sbjct: 327 YRILIQ 332
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 182/393 (46%), Gaps = 40/393 (10%)
Query: 51 IFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKA 110
+FK ++ G +K ++ +LIE L F + L+ MK +++ ++ F +I +
Sbjct: 114 VFKWAENQKG-FKHTTSNYNALIESLGKIKQFKLIWSLVDDMK-AKKLLSKETFALISRR 171
Query: 111 YGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVI---------------IQEGHFHR 155
Y +A ++A+ FH+ME EF K FN +L+ + +++ F
Sbjct: 172 YARARKVKEAIGAFHKME-EFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEP 230
Query: 156 ALEFYSHVC----KSLNI---------------QPNGLTFNLVIKALCKVGLVDQAVEVF 196
++ Y+ + + LN+ +P+ + + ++I A CK ++A+ F
Sbjct: 231 DIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFF 290
Query: 197 RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
+ RNC P + + +L++GL E ++++A+ + + G +N L+ A C
Sbjct: 291 NEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWS 350
Query: 257 GDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTF 316
+ A K VD M LKG PN TY+ ++ L R + +A + M C P T+
Sbjct: 351 QRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTY 407
Query: 317 GTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMME 376
+V F + R + ++ +G +++SSLI+ L E K + A + + EM++
Sbjct: 408 EIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLD 467
Query: 377 KGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
G P ++S L L EG+ D+ + +++M
Sbjct: 468 VGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 142/306 (46%), Gaps = 3/306 (0%)
Query: 210 TYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNM 269
T++ + + ++ EA+ +M+ G FN ++ L K ++ A K+ D M
Sbjct: 164 TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM 223
Query: 270 SLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRA 329
K P+ +Y L++G ++ L + + +M P+ V +G +++ K +
Sbjct: 224 KKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKY 283
Query: 330 SDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSAL 389
+ +E+R + + +I+ SLI+GL E K A++ ++ G Y+AL
Sbjct: 284 EEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNAL 343
Query: 390 IDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSC 449
+ C + ++A + + EM+ KG PN+ TY ++ +A V++ M SC
Sbjct: 344 VGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SC 400
Query: 450 NHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMK 509
Y I++ C +L A+ +W +M +G+ + +SS+I C+ +D+ +
Sbjct: 401 EPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACE 460
Query: 510 LFNQML 515
FN+ML
Sbjct: 461 YFNEML 466
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 145/335 (43%), Gaps = 8/335 (2%)
Query: 175 TFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEM 234
TF L+ + + V +A+ F + +S ++ ++D L K + +A + D+M
Sbjct: 164 TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM 223
Query: 235 QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKL 294
+ + P+ + +L+ ++ +L+R ++ M +G P+ V Y +++ C+ K
Sbjct: 224 KKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKY 283
Query: 295 NKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSL 354
+A+ N+M C P+ F +L++G + + +D + G Y++L
Sbjct: 284 EEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNAL 343
Query: 355 ISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGH 414
+ + E A + EM KG PN Y ++ L R ++ EA E M +
Sbjct: 344 VGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE-- 401
Query: 415 LPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMM 474
P TY ++R F AI +W EMK +S LI LC KL EA
Sbjct: 402 -PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACE 460
Query: 475 VWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMK 509
+ +ML GI+ +S + L+D+G K
Sbjct: 461 YFNEMLDVGIRPPGHMFSRL-----KQTLLDEGRK 490
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 158/364 (43%), Gaps = 27/364 (7%)
Query: 272 KGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASD 331
KG YN L++ L + + SL++ M A K + + TF + + + + +
Sbjct: 122 KGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-TFALISRRYARARKVKE 180
Query: 332 GASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALID 391
+EE G + ++ ++ L K A +++ +M +K EP+ Y+ L++
Sbjct: 181 AIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLE 240
Query: 392 GLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNH 451
G +E E EMK++G P+ Y ++ +A +AI + EM+ +C
Sbjct: 241 GWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKP 300
Query: 452 NEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLF 511
+ + LINGL KL +A+ +++ S G L+ Y++++ +C +Q ++ K
Sbjct: 301 SPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTV 360
Query: 512 NQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLR 571
++M + + P+ TY+I+L+ + A +V M C+P T +I
Sbjct: 361 DEMRLK--GVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEI------ 409
Query: 572 DNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRN 631
+V ++R A KI + M + +LP ++ ++ LC
Sbjct: 410 ---------------MVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENK 454
Query: 632 IRKA 635
+ +A
Sbjct: 455 LDEA 458
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 5/273 (1%)
Query: 68 SFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRM 127
S+ L+E + ++E+ ++MK E + +I A+ KA E+A+ F+ M
Sbjct: 234 SYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEM 293
Query: 128 EAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVG 187
E +CK + F S++N + E + ALEF+ KS T+N ++ A C
Sbjct: 294 EQR-NCKPSPHIFCSLINGLGSEKKLNDALEFFER-SKSSGFPLEAPTYNALVGAYCWSQ 351
Query: 188 LVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFN 247
++ A + + L+ P++ TY ++ L + R EA + M E P +
Sbjct: 352 RMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE---PTVSTYE 408
Query: 248 VLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVAN 307
+++ C K L A K+ D M KG +P +++L+ LC + KL++A N+M+
Sbjct: 409 IMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDV 468
Query: 308 KCVPNDVTFGTLVHGFVKQGRASDGASVLISLE 340
P F L + +GR +++ ++
Sbjct: 469 GIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMD 501
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 197/407 (48%), Gaps = 20/407 (4%)
Query: 123 LFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKA 182
L+ R +C+ T+ + N+VL +++ + L+ + + ++ I PN +T+NL+ +A
Sbjct: 116 LYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQA-GIAPNIITYNLIFQA 174
Query: 183 LCKVGLVDQAVEVFRGIHLRNCA--PDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTF 240
V + A+E ++ + + N P T+ L+ GL +++A+ + ++M ++G
Sbjct: 175 YLDVRKPEIALEHYK-LFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFV 233
Query: 241 PNPFVFNVLISALCKKGDLIRAAKLVDNM--SLKGCVPNEVTYNTLVDGLCRKGKLNKAV 298
+P V++ L+ K D KL + L G V + V Y L+ G K +A+
Sbjct: 234 VDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAM 293
Query: 299 SLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDG----ASVLISLEERGHRGNEYI---- 350
+ V + V + + +V + + +G A L ++ H ++
Sbjct: 294 ECYEEAVGEN---SKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNL 350
Query: 351 --YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIE 408
++ +++G GKFE AM+++++M + C P+T+ ++ L++ LC EA + E
Sbjct: 351 GTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGE 410
Query: 409 MKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGK 468
M+ K P+ +TY LM F+ G + +K M ++ N Y+ L + L K GK
Sbjct: 411 MEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGK 470
Query: 469 LMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
L +A + M+S+ +K+D AY ++ A +D+ +K+ ++ML
Sbjct: 471 LDDAKSFFDMMVSK-LKMDDEAYKFIMRALSEAGRLDEMLKIVDEML 516
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 163/382 (42%), Gaps = 48/382 (12%)
Query: 156 ALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLM 215
ALE Y + + P+ TF +++K L +++A+E+ + ++ D YS LM
Sbjct: 184 ALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLM 243
Query: 216 DGLCKEGRIDEAVSLLDEMQ----------------IEGTFP------------------ 241
G K D + L E++ ++G F
Sbjct: 244 MGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGEN 303
Query: 242 -----NPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEV-----TYNTLVDGLCRK 291
+ +N ++ AL + G A KL D + + P + T+N +V+G C
Sbjct: 304 SKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAG 363
Query: 292 GKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIY 351
GK +A+ + QM KC P+ ++F L++ ++ + +EE+ + +EY Y
Sbjct: 364 GKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTY 423
Query: 352 SSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKN 411
L+ FKEGK + +K M+E PN VY+ L D L + GK D+A+ + M +
Sbjct: 424 GLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVS 483
Query: 412 KGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEM-KNNSCNHNEVCYSILINGLCKNGKL- 469
K + + Y +MR EAG + + + EM +++ +E + L K G+
Sbjct: 484 KLKMDDE-AYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRKGGREG 542
Query: 470 -MEAMMVWKQMLSRGIKLDVVA 490
+E +M K+ L K +A
Sbjct: 543 DLEKLMEEKERLKAEAKAKELA 564
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 177/400 (44%), Gaps = 50/400 (12%)
Query: 203 NCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISAL--CKKGDL- 259
NC P +T +T++ ++ + + L + G PN +N++ A +K ++
Sbjct: 125 NCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIA 184
Query: 260 IRAAKL-VDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
+ KL +DN L P+ T+ LV GL L KA+ + M V + V +
Sbjct: 185 LEHYKLFIDNAPLN---PSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSY 241
Query: 319 LVHGFVKQGRASDGASVLISLEER--GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMME 376
L+ G VK A + L+E+ G + +Y L+ G F + + AM+ ++E +
Sbjct: 242 LMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVG 301
Query: 377 KGCEP--NTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDC 434
+ + + + Y+ +++ L GK DEA + +K + + P
Sbjct: 302 ENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPR----------------- 344
Query: 435 HKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSM 494
H A+ N +++++NG C GK EAM V++QM D ++++++
Sbjct: 345 HLAV-------------NLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNL 391
Query: 495 IHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQ 554
++ C+ +L+ + KL+ +M +E ++PD TY +L++ +++ I M++
Sbjct: 392 MNQLCDNELLAEAEKLYGEM--EEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVES 449
Query: 555 GCDPDFITCDIFLKTLRDNM---NPPQDGREFLDELVVRL 591
P+ + L+D + D + F D +V +L
Sbjct: 450 NLRPNLAVYN----RLQDQLIKAGKLDDAKSFFDMMVSKL 485
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 133/339 (39%), Gaps = 57/339 (16%)
Query: 250 ISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC 309
I L ++ DL AA + C P T NT++ R+ K + L +
Sbjct: 102 ILKLIRENDLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGI 161
Query: 310 VPNDVTFGTLVHGFVKQGRAS----------DGASVLISLEERGHRGNEYIYSSLISGLF 359
PN +T+ + ++ + D A + S+ + L+ GL
Sbjct: 162 APNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIA---------TFRILVKGLV 212
Query: 360 KEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK--GHLPN 417
E AM++ ++M KG + VVYS L+ G + AD + E+K K G + +
Sbjct: 213 SNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDD 272
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
Y LM+G+F KEM+ + CY + +N K
Sbjct: 273 GVVYGQLMKGYF-----------MKEMEKEAME----CYE---EAVGENSK--------- 305
Query: 478 QMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQE---AELQPDVATYNILLNA 534
+++ +AY+ ++ D+ +KLF+ + + L ++ T+N+++N
Sbjct: 306 ------VRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNG 359
Query: 535 FYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDN 573
+ AM+V M D C PD ++ + + L DN
Sbjct: 360 YCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDN 398
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 145/284 (51%), Gaps = 8/284 (2%)
Query: 120 AVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKS-LNIQPNGLTFNL 178
A +LF+ + A +K NSVL + ++ + H+ KS N +P TF +
Sbjct: 68 AKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLI 127
Query: 179 VIKALCKVGLVDQAVE-VFRGIHL---RNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEM 234
++ C+ D ++ V R ++L PD T + LC+ GR+DEA L+ E+
Sbjct: 128 LLSHACRAP--DSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKEL 185
Query: 235 QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCV-PNEVTYNTLVDGLCRKGK 293
+ + P+ + +N L+ LCK DL + VD M V P+ V++ L+D +C
Sbjct: 186 TEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKN 245
Query: 294 LNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSS 353
L +A+ L++++ P+ + T++ GF + S+ V ++E G ++ Y++
Sbjct: 246 LREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNT 305
Query: 354 LISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREG 397
LI GL K G+ E A K M++ G EP+T Y++L++G+CR+G
Sbjct: 306 LIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 109/227 (48%), Gaps = 3/227 (1%)
Query: 276 PNEVTYNTLVDGLCR--KGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGA 333
P T+ L+ CR ++ +LN MV N P+ VT V + GR +
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 334 SVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEK-GCEPNTVVYSALIDG 392
++ L E+ + Y Y+ L+ L K + EM + +P+ V ++ LID
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 393 LCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHN 452
+C EA + ++ N G P+ F Y+++M+GF +A+ V+K+MK +
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 453 EVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFC 499
++ Y+ LI GL K G++ EA M K M+ G + D Y+S+++G C
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 131/279 (46%), Gaps = 8/279 (2%)
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTF-GTLVHGFVKQGRASDGASVL--ISLEERGHRG 346
+ L+ A SL N + A +P D+ F +++ + +D + I + R
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 347 NEYIYSSLISGLFK--EGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE 404
+ L+S + + + ++ M+ G EP+ V + LC G+ DEA++
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 405 YLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNN-SCNHNEVCYSILINGL 463
+ E+ K P+++TY+ L++ + D H EM+++ + V ++ILI+ +
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 464 CKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQP 523
C + L EAM + ++ + G K D Y++++ GFC + + ++ +M +E ++P
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM--KEEGVEP 298
Query: 524 DVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
D TYN L+ + + A L M+D G +PD T
Sbjct: 299 DQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTAT 337
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 128/296 (43%), Gaps = 40/296 (13%)
Query: 177 NLVIKALCKVGLVDQAVEVFRGI--HLRNCAPDSYTYSTLMDGLCK--EGRIDEAVSLLD 232
N V+++ + +V+ V++F+ I N P T+ L+ C+ + I +L+
Sbjct: 89 NSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLN 148
Query: 233 EMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKG 292
M G P+ ++ + +LC+ G + A L+ ++ K P+ TYN L+ LC+
Sbjct: 149 LMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCK 208
Query: 293 KLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRAS-DGASVLISLEERGHRGNEYIY 351
L+ +V+ FV + R D L+S +
Sbjct: 209 DLH-----------------------VVYEFVDEMRDDFDVKPDLVS------------F 233
Query: 352 SSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKN 411
+ LI + AM L ++ G +P+ +Y+ ++ G C K EA +MK
Sbjct: 234 TILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE 293
Query: 412 KGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNG 467
+G P+ TY++L+ G +AG +A + K M + + Y+ L+NG+C+ G
Sbjct: 294 EGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 85/167 (50%), Gaps = 24/167 (14%)
Query: 465 KNGKLMEAMMVWKQMLSRG-IKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQP 523
K+ L +A ++ + + I LD+ ++S++ + + +V+ +KLF +L + +P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 524 DVATYNILLNAF--YQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGR 581
+T+ ILL+ ++IS VLN+M++ G +PD +T DI +++L + GR
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCET------GR 174
Query: 582 EFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCK 628
+DE A +++ + ++ P+ T+ +++ LCK
Sbjct: 175 --VDE-------------AKDLMKELTEKHSPPDTYTYNFLLKHLCK 206
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 90/206 (43%), Gaps = 21/206 (10%)
Query: 440 VWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFC 499
V M NN ++V I + LC+ G++ EA + K++ + D Y+ ++ C
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 500 NAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
+ + + ++M + +++PD+ ++ IL++ N+ AM +++ + + G PD
Sbjct: 206 KCKDLHVVYEFVDEMR-DDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
Query: 560 ----------FITCD-------IFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASK 602
F T ++ K + + P Q + L+ L K R A
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQIT---YNTLIFGLSKAGRVEEARM 321
Query: 603 IIEVMLDRCLLPEASTWAIVVQQLCK 628
++ M+D P+ +T+ ++ +C+
Sbjct: 322 YLKTMVDAGYEPDTATYTSLMNGMCR 347
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 144/312 (46%), Gaps = 16/312 (5%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
+KA+ F +E F + + ++ + F +F V + N + T +
Sbjct: 108 QKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTAS 167
Query: 178 L--VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQ 235
+ ++K L + G V +A+ F + +C PD Y Y+T+++ LC+ G +A LLD+MQ
Sbjct: 168 ITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQ 227
Query: 236 IEG--TFPNPFVFNVLISALCKKG-----------DLIRAAKLVDNMSLKGCVPNEVTYN 282
+ G P+ + + +LIS+ C+ G + A ++ M +G VP+ VTYN
Sbjct: 228 LPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYN 287
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER 342
L+DG C+ ++ +A+ L M CVPN VT+ + + + ++ ++++
Sbjct: 288 CLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKL 347
Query: 343 GHR-GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADE 401
GH Y+ LI L + + A L EM+E G P Y + D L EG A
Sbjct: 348 GHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLAST 407
Query: 402 AREYLIEMKNKG 413
E L + +G
Sbjct: 408 LDEELHKRMREG 419
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 14/233 (6%)
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM--VA 306
L+ L ++G + A M C P+ YNT+++ LCR G KA LL+QM
Sbjct: 171 LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPG 230
Query: 307 NKCVPNDVTFGTLVHGFVKQG-----------RASDGASVLISLEERGHRGNEYIYSSLI 355
+ P+ T+ L+ + + G R + + + RG + Y+ LI
Sbjct: 231 FRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLI 290
Query: 356 SGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGH- 414
G K + A++L+++M KGC PN V Y++ I + + A E + MK GH
Sbjct: 291 DGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHG 350
Query: 415 LPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNG 467
+P S TY+ L+ E +A + EM E Y ++ + L G
Sbjct: 351 VPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 121/283 (42%), Gaps = 46/283 (16%)
Query: 404 EYLIEMKNKGHLPNSFTYSS---LMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILI 460
++L ++ + + N T +S LM+ E G +A+ + MK C + Y+ +I
Sbjct: 148 DFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTII 207
Query: 461 NGLCKNGKLMEAMMVWKQMLSRGIKL--DVVAYSSMIHGFCNAQLVD-----------QG 507
N LC+ G +A + QM G + D Y+ +I +C + +
Sbjct: 208 NALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEA 267
Query: 508 MKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIF- 566
++F +ML + PDV TYN L++ + N I RA+++ M +GC P+ +T + F
Sbjct: 268 NRMFREMLFRG--FVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFI 325
Query: 567 ---------------LKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRC 611
++T++ + G L+ LV+ +R A ++ M++
Sbjct: 326 RYYSVTNEIEGAIEMMRTMK-KLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAG 384
Query: 612 LLPEASTWAIVVQQLCKP-----------RNIRKAISECWSRL 643
L+P T+ +V L + +R+ I + +SR+
Sbjct: 385 LVPREYTYKLVCDALSSEGLASTLDEELHKRMREGIQQRYSRV 427
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 162/336 (48%), Gaps = 10/336 (2%)
Query: 140 FNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGI 199
N ++ + + G A + +S + PN T+ L ++ALCK +D A V +
Sbjct: 234 LNELIALFGKLGKSKAAFDVFSKT-EEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKM 292
Query: 200 HLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQI-EGTFPNPFVFNVLISALCKK-G 257
+ ++ CKEG+ +EA S+ + + E + P FV LI+ALCK G
Sbjct: 293 LKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFV-ATLITALCKNDG 351
Query: 258 DLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFG 317
+ A +++ ++S + ++ ++ LCR + A +LL M++ P + F
Sbjct: 352 TITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFN 411
Query: 318 TLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEK 377
+VH K G + VL +E RG + + Y Y+ +ISG K G + A ++ E +K
Sbjct: 412 LVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKK 471
Query: 378 GCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGF-FEAGDCHK 436
+ + V Y ALI G C+ + DEA + L EM G PN+ Y+ L++ F +A D K
Sbjct: 472 HKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEK 531
Query: 437 AILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEA 472
A ++++EMK + N + GL + K ME+
Sbjct: 532 AEVLFEEMKQKGLHLNAIS-----QGLIRAVKEMES 562
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 139/296 (46%), Gaps = 11/296 (3%)
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM 304
+ N LI+ K G A + G PN TY ++ LC++ ++ A S+ +M
Sbjct: 233 ILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKM 292
Query: 305 VANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFK-EGK 363
+ + + G ++ F K+G+A + SV + + ++LI+ L K +G
Sbjct: 293 LKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGT 352
Query: 364 FEHAMQ----LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSF 419
A + L E +G +P +S +I LCR +A+ L++M +KG P +
Sbjct: 353 ITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNA 408
Query: 420 TYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM 479
++ ++ + GD +A V K M++ + Y+++I+G K G + EA + +
Sbjct: 409 VFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEA 468
Query: 480 LSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAF 535
+ KL V Y ++I G+C + D+ +KL N+M +QP+ YN L+ +F
Sbjct: 469 KKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEM--DRFGVQPNADEYNKLIQSF 522
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 131/298 (43%), Gaps = 4/298 (1%)
Query: 220 KEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEV 279
K G+ A + + + G PN + + + ALCK+ + A + + M G +
Sbjct: 243 KLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGE 302
Query: 280 TYNTLVDGLCRKGKLNKAVSLLN-QMVANKCVPNDVTFGTLVHGFVK-QGRASDGASVLI 337
++ C++GK +A S+ K +P TL+ K G + +L
Sbjct: 303 QMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFV-ATLITALCKNDGTITFAQEMLG 361
Query: 338 SLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREG 397
L R +S +I L + + A L +M+ KG P V++ ++ + G
Sbjct: 362 DLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTG 421
Query: 398 KADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYS 457
DEA+E L M+++G P+ +TY+ ++ G+ + G +A + E K + V Y
Sbjct: 422 DLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYH 481
Query: 458 ILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQL-VDQGMKLFNQM 514
LI G CK + EA+ + +M G++ + Y+ +I FC L ++ LF +M
Sbjct: 482 ALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEM 539
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 3/222 (1%)
Query: 347 NEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYL 406
N I + LI+ K GK + A ++ + E G PN Y ++ LC+ D A
Sbjct: 230 NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVC 289
Query: 407 IEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKN 466
+M G L +++ F + G +A V++ K + + LI LCKN
Sbjct: 290 EKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKN 349
Query: 467 -GKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDV 525
G + A + + + + +S +IH C + V L M+ + P
Sbjct: 350 DGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGP--APGN 407
Query: 526 ATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
A +N++++A + ++ A +VL +M +G PD T + +
Sbjct: 408 AVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVII 449
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 97/231 (41%), Gaps = 3/231 (1%)
Query: 319 LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG 378
L+ F K G++ V EE G N Y + L K + A + ++M++ G
Sbjct: 237 LIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSG 296
Query: 379 CEPNTVVYSALIDGLCREGKADEARE-YLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKA 437
+I C+EGKA+EA Y + + LP F + + G A
Sbjct: 297 VLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFA 356
Query: 438 ILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHG 497
+ ++ + +S +I+ LC+ + +A + M+S+G ++ ++H
Sbjct: 357 QEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHA 416
Query: 498 FCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL 548
+D+ ++ M + L+PDV TY ++++ + + + A ++L
Sbjct: 417 CSKTGDLDEAKEVLKLM--ESRGLKPDVYTYTVIISGYAKGGMMDEAQEIL 465
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 164/353 (46%), Gaps = 6/353 (1%)
Query: 224 IDEAVSLLDEMQIEGTF-PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVT-- 280
+D A+SL + + + P+ + VL L + D + L + M +++
Sbjct: 185 VDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFN 244
Query: 281 -YNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISL 339
YN ++ L + KL A + + C + T+ L+ F+ +G + S+
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 340 EERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKA 399
E+ + Y +I L K G+ + A +L+++M E+ P+ V+S+L+D + + G+
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 400 DEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSIL 459
D + + +EM+ GH P++ + SL+ + +AG A+ +W EMK + N Y+++
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 460 INGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEA 519
I K+GKL AM V+K M G YS ++ + VD MK++N M A
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSM--TNA 482
Query: 520 ELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRD 572
L+P +++Y LL + + A +L M G D D+ + ++D
Sbjct: 483 GLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYIKD 535
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 3/306 (0%)
Query: 210 TYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNM 269
Y+ ++ L K +++ A + Q G + +N L+ KG +A ++ ++M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 270 SLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRA 329
+ + TY ++ L + G+L+ A L QM K P+ F +LV K GR
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 330 SDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSAL 389
V + ++ GHR + ++ SLI K GK + A++LW EM + G PN +Y+ +
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 390 IDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSC 449
I+ + GK + A +M+ G LP TYS L+ +G A+ ++ M N
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Query: 450 NHNEVCYSILINGLCKNGKLME-AMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGM 508
Y L+ L N +L++ A + +M + G +DV A S ++ + VD +
Sbjct: 485 RPGLSSYISLLT-LLANKRLVDVAGKILLEMKAMGYSVDVCA-SDVLMIYIKDASVDLAL 542
Query: 509 KLFNQM 514
K M
Sbjct: 543 KWLRFM 548
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 148/338 (43%), Gaps = 1/338 (0%)
Query: 175 TFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEM 234
T+N ++ GL +A E++ + + D TY ++ L K GR+D A L +M
Sbjct: 280 TYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQM 339
Query: 235 QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKL 294
+ P+ VF+ L+ ++ K G L + K+ M G P+ + +L+D + GKL
Sbjct: 340 KERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKL 399
Query: 295 NKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSL 354
+ A+ L ++M + PN + ++ K G+ +V +E+ G YS L
Sbjct: 400 DTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCL 459
Query: 355 ISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGH 414
+ G+ + AM+++ M G P Y +L+ L + D A + L+EMK G+
Sbjct: 460 LEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGY 519
Query: 415 LPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMM 474
+ LM + + A+ + M ++ N L KNG A
Sbjct: 520 SVDVCASDVLMI-YIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARP 578
Query: 475 VWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFN 512
+ + ++ K+D+V Y+S++ Q D+ +L +
Sbjct: 579 LLETLVHSAGKVDLVLYTSILAHLVRCQDEDKERQLMS 616
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/498 (21%), Positives = 206/498 (41%), Gaps = 92/498 (18%)
Query: 62 YKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIV---IFKAYGKAHFPE 118
Y D + L + L DF ++ L ++M ++ + +F + + KA E
Sbjct: 201 YLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLE 260
Query: 119 KAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNL 178
A F + + E CK +++N+++ + + +G ++A E Y + K+ ++ +G T+ L
Sbjct: 261 VAFCCFKKAQ-ESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLL-DGSTYEL 318
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDE------------ 226
+I +L K G +D A ++F+ + R P +S+L+D + K GR+D
Sbjct: 319 IIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFG 378
Query: 227 -----------------------AVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAA 263
A+ L DEM+ G PN ++ ++I + K G L A
Sbjct: 379 HRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAM 438
Query: 264 KLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVH-- 321
+ +M G +P TY+ L++ G+++ A+ + N M P ++ +L+
Sbjct: 439 TVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLL 498
Query: 322 -------------------GFVKQGRASD-------GASVLISLE------ERGHRGNEY 349
G+ ASD ASV ++L+ G + N +
Sbjct: 499 ANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNF 558
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
I L K G ++ A L + ++ + + V+Y++++ L R D+ R+ + +
Sbjct: 559 IIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDKERQLMSIL 618
Query: 410 KNKGHLPNSFTYSSLMRGFFEAGDCHK-AILVW---------KEMKNNSCNHNEVCYSIL 459
H ++F M G F + K +L + E++ + + ++L
Sbjct: 619 SATKHKAHAF-----MCGLFTGPEQRKQPVLTFVREFYQGIDYELEEGAARY---FVNVL 670
Query: 460 INGLCKNGKLMEAMMVWK 477
+N L G++ A VWK
Sbjct: 671 LNYLVLMGQINRARCVWK 688
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 136/570 (23%), Positives = 246/570 (43%), Gaps = 93/570 (16%)
Query: 118 EKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQ-----EGHFHRALEFYSHVCKSLNIQPN 172
EKAV LF M+ K+++S + ++Q EG F + + +V + L ++ N
Sbjct: 71 EKAVELFREMQF-----SGAKAYDSTMVKLLQVCSNKEG-FAEGRQIHGYVLR-LGLESN 123
Query: 173 GLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLD 232
N +I + G ++ + +VF + RN + ++++++ K G +D+A+ LLD
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLS----SWNSILSSYTKLGYVDDAIGLLD 179
Query: 233 EMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKG 292
EM+I G P+ +N L+S KG A ++ M + G P+ + ++L+ + G
Sbjct: 180 EMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPG 239
Query: 293 --KLNKAV-----------------SLLNQMVANKCVP------------NDVTFGTLVH 321
KL KA+ +L++ + +P N V + +LV
Sbjct: 240 HLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVS 299
Query: 322 GFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEP 381
G D +++I +E+ G + + ++SL SG GK E A+ + +M EKG P
Sbjct: 300 GLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAP 359
Query: 382 NTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVW 441
N V ++A+ G + G A + I+M+ +G PN+ T S+L++ C +
Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL----GCLSLLHSG 415
Query: 442 KEMKNNSCNHNEVC----YSILINGLCKNGKLMEAMMV-WKQMLSRGIK-LDVVAYSSMI 495
KE+ N +C + L++ K+G L A+ + W GIK + +++ M+
Sbjct: 416 KEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFW------GIKNKSLASWNCML 469
Query: 496 HGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQ- 554
G+ ++G+ F+ ML EA ++PD T+ +L+ + ++M +
Sbjct: 470 MGYAMFGRGEEGIAAFSVML--EAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRY 527
Query: 555 GCDPDFITCDIFLKTLRDNMNPPQDGRE-FLDELVVRLVKRQRTIGASKIIEVMLDRCLL 613
G P C + L GR +LDE A I+ M L
Sbjct: 528 GIIPTIEHCSCMVDLL---------GRSGYLDE-------------AWDFIQTM---SLK 562
Query: 614 PEASTWAIVVQQLCKPRNIRKAISECWSRL 643
P+A+ W + CK + W RL
Sbjct: 563 PDATIWGAFLSS-CKIHRDLELAEIAWKRL 591
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 148/349 (42%), Gaps = 49/349 (14%)
Query: 262 AAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTF----- 316
A KL D M + +++ +N +V R G KAV L +M + D T
Sbjct: 42 ANKLFDEMPKR----DDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQ 97
Query: 317 ----------GTLVHGFV--------------------KQGRASDGASVLISLEERGHRG 346
G +HG+V + G+ V S+++R
Sbjct: 98 VCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR---- 153
Query: 347 NEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYL 406
N ++S++S K G + A+ L EM G +P+ V +++L+ G +G + +A L
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 407 IEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKN 466
M+ G P++ + SSL++ E G + + N ++ + LI+ K
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKT 273
Query: 467 GKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVA 526
G L A MV+ M ++ ++VA++S++ G A L+ L +M ++ ++PD
Sbjct: 274 GYLPYARMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRM--EKEGIKPDAI 327
Query: 527 TYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMN 575
T+N L + + +A+DV+ M ++G P+ ++ N N
Sbjct: 328 TWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGN 376
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 140/259 (54%), Gaps = 5/259 (1%)
Query: 68 SFYSL-IEKLAASSDFASLEELLQQMKRERRV-FIEKNFIVIFKAYGK-AHFPEKAVNLF 124
S Y+L I K + + +EE+++ +K E+R F E+ F + + YG A +A+ +
Sbjct: 96 SLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEIL 155
Query: 125 HRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALC 184
M +F C + KSFN +LN+++ F + + K L ++ + N++IK LC
Sbjct: 156 FGM-PDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPK-LGVEIDACCLNILIKGLC 213
Query: 185 KVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPF 244
+ G ++ A+++ + P+ T+S L+ G C +G+ +EA LL+ M+ E P+
Sbjct: 214 ESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTI 273
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM 304
FN+LIS L KKG + L++ M +KGC PN TY ++ GL K + +A +++QM
Sbjct: 274 TFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQM 333
Query: 305 VANKCVPNDVTFGTLVHGF 323
++ P+ +++ +V G
Sbjct: 334 ISWGMRPSFLSYKKMVLGL 352
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 140/309 (45%), Gaps = 2/309 (0%)
Query: 141 NSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIH 200
N VL + L Y H K + QP + L+I + + D+ EV R I
Sbjct: 63 NEVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIK 122
Query: 201 L-RNCAPDSYTYSTLMDGLCK-EGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGD 258
L + C + LM GRI+ A+ +L M G +P+ FN +++ L
Sbjct: 123 LEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKL 182
Query: 259 LIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
K+ + G + N L+ GLC G L A+ LL++ K PN +TF
Sbjct: 183 FDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSP 242
Query: 319 LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG 378
L+ GF +G+ + +L +E+ + ++ LISGL K+G+ E + L + M KG
Sbjct: 243 LIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKG 302
Query: 379 CEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAI 438
CEPN Y ++ GL + + EA+E + +M + G P+ +Y ++ G E +
Sbjct: 303 CEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMD 362
Query: 439 LVWKEMKNN 447
V ++M N+
Sbjct: 363 WVLRQMVNH 371
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 115/236 (48%)
Query: 186 VGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFV 245
G +++A+E+ G+ C P S +++ +++ L DE + G +
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACC 204
Query: 246 FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
N+LI LC+ G+L A +L+D + PN +T++ L+ G C KGK +A LL +M
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE 365
+ P+ +TF L+ G K+GR +G +L ++ +G N Y ++ GL + +
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNL 324
Query: 366 HAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTY 421
A ++ +M+ G P+ + Y ++ GLC E L +M N G +P + +
Sbjct: 325 EAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 145/309 (46%), Gaps = 2/309 (0%)
Query: 93 KRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQ-EG 151
KR+ E + ++ +G+A ++ + ++ E C+ + + F +++ + G
Sbjct: 87 KRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAG 146
Query: 152 HFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTY 211
+RA+E + P+ +FN ++ L L D+ ++F D+
Sbjct: 147 RINRAIEILFGM-PDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 212 STLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSL 271
+ L+ GLC+ G ++ A+ LLDE + + PN F+ LI C KG A KL++ M
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 272 KGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASD 331
+ P+ +T+N L+ GL +KG++ + + LL +M C PN T+ +++G + + R +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 332 GASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALID 391
++ + G R + Y ++ GL + + ++M+ G P T+++ ++
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
Query: 392 GLCREGKAD 400
+ + D
Sbjct: 386 CVVSKNNDD 394
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 111/224 (49%)
Query: 292 GKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIY 351
G++N+A+ +L M C P+ +F +++ V + + +S + G +
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 352 SSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKN 411
+ LI GL + G E A+QL E ++ PN + +S LI G C +GK +EA + L M+
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 412 KGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLME 471
+ P++ T++ L+ G + G + I + + MK C N Y ++ GL + +E
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 472 AMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
A + QM+S G++ ++Y M+ G C + V + + QM+
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMV 369
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 134/316 (42%), Gaps = 25/316 (7%)
Query: 311 PNDVTFGTLVHGFVKQGRASDGASVL--ISLEERGHRGNEYIYSSLISGLFKEGKFEHAM 368
P + + +++ F + + V+ I LE+R E+ Y+ + G+ A+
Sbjct: 93 PTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAI 152
Query: 369 QLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGF 428
++ M + GC P++ ++ +++ L DE + + G ++ + L++G
Sbjct: 153 EILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGL 212
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
E+G+ A+ + E N + +S LI G C GK EA + ++M I+ D
Sbjct: 213 CESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDT 272
Query: 489 VAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL 548
+ ++ +I G V++G+ L +M + E P+ TY +L + A +++
Sbjct: 273 ITFNILISGLRKKGRVEEGIDLLERMKVKGCE--PNPGTYQEVLYGLLDKKRNLEAKEMM 330
Query: 549 NIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVML 608
+ M+ G P F++ ++V+ L + + + ++ M+
Sbjct: 331 SQMISWGMRPSFLS---------------------YKKMVLGLCETKSVVEMDWVLRQMV 369
Query: 609 DRCLLPEASTWAIVVQ 624
+ +P+ W VVQ
Sbjct: 370 NHGFVPKTLMWWKVVQ 385
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 132/293 (45%), Gaps = 4/293 (1%)
Query: 206 PDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKL 265
P+ ++ L+D LCK G + E +LL M+ P+ FNVL C+ D +A KL
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMR-HRVKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 266 VDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCV---PNDVTFGTLVHG 322
++ M G P TY +D C+ G +++A L + M+ P TF ++
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 323 FVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPN 382
K +A + ++ + G + Y +I G+ K + A + EM KG P+
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPD 410
Query: 383 TVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWK 442
V Y+ + LC K DEA + M P+ TY+ L+ FFE D A W
Sbjct: 411 IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWT 470
Query: 443 EMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
EM C + Y +INGL + EA + ++++++G+KL + S +
Sbjct: 471 EMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFL 523
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 138/289 (47%), Gaps = 8/289 (2%)
Query: 169 IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAV 228
++P+ TFN++ C+V +A+++ + P+++TY +D C+ G +DEA
Sbjct: 264 VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAA 323
Query: 229 SLLDEMQIEGTF---PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
L D M +G+ P F ++I AL K +L+ M GC+P+ TY ++
Sbjct: 324 DLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVI 383
Query: 286 DGLCRKGKLNKAVSLLNQMVANKCVPND-VTFGTLVHGFVKQGRASDGASVLISLEERGH 344
+G+C K+++A L++M +NK P D VT+ + + + + + + E
Sbjct: 384 EGMCMAEKVDEAYKFLDEM-SNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRC 442
Query: 345 RGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE 404
+ Y+ LIS F+ + A W EM ++ C + Y A+I+GL +A EA
Sbjct: 443 APSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACF 502
Query: 405 YLIEMKNKG-HLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHN 452
L E+ NKG LP S LMR E G+ KAI E NH+
Sbjct: 503 LLEEVVNKGLKLPYRVFDSFLMR-LSEVGNL-KAIHKVSEHMKKFYNHS 549
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 139/337 (41%), Gaps = 41/337 (12%)
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAV 298
T P FN+L+ ALCK G + L+ M + P+ T+N L G CR KA+
Sbjct: 230 TQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAM 288
Query: 299 SLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR---GNEYIYSSLI 355
LL +M+ P + T+ + F + G + A + + +G ++ +I
Sbjct: 289 KLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMI 348
Query: 356 SGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL 415
L K K E +L M+ GC P+ Y +I+G+C K DEA ++L EM NKG+
Sbjct: 349 VALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYP 408
Query: 416 PNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMV 475
P+ TY+ +R LC+N K EA+ +
Sbjct: 409 PDIVTYNCFLRV-----------------------------------LCENRKTDEALKL 433
Query: 476 WKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAF 535
+ +M+ V Y+ +I F D + +M + + DV TY ++N
Sbjct: 434 YGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEM--DKRDCVQDVETYCAMINGL 491
Query: 536 YQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRD 572
+ + A +L ++++G + D FL L +
Sbjct: 492 FDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSE 528
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 11/223 (4%)
Query: 357 GLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLP 416
GL KEG+ L + M + +P+ ++ L G CR +A + L EM GH P
Sbjct: 248 GLVKEGE-----ALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKP 301
Query: 417 NSFTYSSLMRGFFEAGDCHKAILVWKEM--KNNSCNHNEV-CYSILINGLCKNGKLMEAM 473
+FTY + + F +AG +A ++ M K ++ + ++++I L KN K E
Sbjct: 302 ENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECF 361
Query: 474 MVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLN 533
+ +M+S G DV Y +I G C A+ VD+ K ++M PD+ TYN L
Sbjct: 362 ELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEM--SNKGYPPDIVTYNCFLR 419
Query: 534 AFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNP 576
+ A+ + M++ C P T ++ + + +P
Sbjct: 420 VLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDP 462
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 6/197 (3%)
Query: 380 EPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAIL 439
+P ++ L+D LC+ G E L M+++ P++ T++ L G+ D KA+
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVK-PDANTFNVLFFGWCRVRDPKKAMK 289
Query: 440 VWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVA---YSSMIH 496
+ +EM Y I+ C+ G + EA ++ M+++G + ++ MI
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 497 GFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGC 556
++ +L +M+ PDV+TY ++ + A L+ M ++G
Sbjct: 350 ALAKNDKAEECFELIGRMI--STGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGY 407
Query: 557 DPDFITCDIFLKTLRDN 573
PD +T + FL+ L +N
Sbjct: 408 PPDIVTYNCFLRVLCEN 424
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 456 YSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
+++L++ LCK G + E + ++M R +K D ++ + G+C + + MKL +M+
Sbjct: 237 FNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMI 295
Query: 516 CQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMN 575
EA +P+ TY ++ F Q + A D+ + M+ +G T F
Sbjct: 296 --EAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFAL------- 346
Query: 576 PPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKA 635
++V L K + ++I M+ LP+ ST+ V++ +C + +A
Sbjct: 347 -----------MIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEA 395
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 149/340 (43%), Gaps = 36/340 (10%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
+F + +LA + +E+LL+ K + E + I YGKA ++A++ F
Sbjct: 72 FAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYGKAGMTKQALDTFFN 131
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
M+ + CK++VKSFN+ L V+ H EF I + ++FN+ IK+ C++
Sbjct: 132 MDL-YGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCEL 190
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
G+ +D A + EM+ G P+ +
Sbjct: 191 GI-----------------------------------LDGAYMAMREMEKSGLTPDVVTY 215
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA 306
LISAL K + L + M LKGC PN T+N + L + + A LL M
Sbjct: 216 TTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPK 275
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEH 366
+ P+ +T+ ++ GF V ++ +G++ N IY ++I L K G F+
Sbjct: 276 LQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDL 335
Query: 367 AMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYL 406
A + K+ M K PN L+ GL ++G+ D+A+ +
Sbjct: 336 AYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIM 375
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 130/325 (40%), Gaps = 8/325 (2%)
Query: 117 PEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTF 176
PEK NLF + +F ++ + G L+F + + P G
Sbjct: 51 PEKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGR----LDFIEDLLEHQKTLPQGRRE 106
Query: 177 NLVIKALC---KVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLL-D 232
+++ + K G+ QA++ F + L C +++ + L + L D
Sbjct: 107 GFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHD 166
Query: 233 EMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKG 292
G + FN+ I + C+ G L A + M G P+ VTY TL+ L +
Sbjct: 167 APSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHE 226
Query: 293 KLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYS 352
+ L N MV C PN TF + V + RA D +L+ + + + Y+
Sbjct: 227 RCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYN 286
Query: 353 SLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK 412
+I G F + A +++ M KG +PN +Y +I LC+ G D A + K
Sbjct: 287 MVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRK 346
Query: 413 GHLPNSFTYSSLMRGFFEAGDCHKA 437
PN T L++G + G +A
Sbjct: 347 KWYPNLDTVEMLLKGLVKKGQLDQA 371
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 125/306 (40%), Gaps = 9/306 (2%)
Query: 207 DSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNP----FVFNVLISALCKKGDLIRA 262
+ + + + L GR+D LL+ + T P F+ + I K G +A
Sbjct: 70 NRFAFEDTVSRLAGAGRLDFIEDLLEH---QKTLPQGRREGFIVRI-IMLYGKAGMTKQA 125
Query: 263 AKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPND-VTFGTLVH 321
NM L GC + ++N + L L+ L+ + + D V+F +
Sbjct: 126 LDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIK 185
Query: 322 GFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEP 381
F + G + +E+ G + Y++LIS L+K + LW M+ KGC+P
Sbjct: 186 SFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKP 245
Query: 382 NTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVW 441
N ++ I L +A +A + L+ M P+S TY+ +++GFF A A V+
Sbjct: 246 NLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVY 305
Query: 442 KEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNA 501
M N Y +I+ LCK G A + K + + ++ ++ G
Sbjct: 306 TAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKK 365
Query: 502 QLVDQG 507
+DQ
Sbjct: 366 GQLDQA 371
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 133 CKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQA 192
CK + +FN + ++ A + + K L ++P+ +T+N+VIK D A
Sbjct: 243 CKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPK-LQVEPDSITYNMVIKGFFLARFPDMA 301
Query: 193 VEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISA 252
V+ +H + P+ Y T++ LCK G D A ++ + + +PN +L+
Sbjct: 302 ERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKG 361
Query: 253 LCKKGDLIRAAKLVD 267
L KKG L +A +++
Sbjct: 362 LVKKGQLDQAKSIME 376
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 81/193 (41%), Gaps = 2/193 (1%)
Query: 378 GCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKA 437
G + + V ++ I C G D A + EM+ G P+ TY++L+ ++ C
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 438 ILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHG 497
+W M C N +++ I L + +A + M ++ D + Y+ +I G
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 498 FCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCD 557
F A+ D +++ M +P++ Y +++ + N A + + +
Sbjct: 292 FFLARFPDMAERVYTAM--HGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWY 349
Query: 558 PDFITCDIFLKTL 570
P+ T ++ LK L
Sbjct: 350 PNLDTVEMLLKGL 362
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 146/304 (48%), Gaps = 37/304 (12%)
Query: 69 FYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRME 128
+ + I +L + F++++E+LQ K+ + E I I YG + E A LF M
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEM- 148
Query: 129 AEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGL 188
E +C++TVKSFN++L+ + A++ + + + L I P+ +T+N +IKALC+ G
Sbjct: 149 PELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGS 208
Query: 189 VDQAVEVFRGIHLRNCAPDSYTYSTLMD-------------------------------- 216
+D + +F + PD +++TL++
Sbjct: 209 MDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNS 268
Query: 217 ---GLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKG 273
GL + + +A++L+D M+ EG P+ +N LI+A +L K + M KG
Sbjct: 269 RVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKG 328
Query: 274 CVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGA 333
P+ VTY L+ LC+KG L++AV + + + +K + + +V + G+ D A
Sbjct: 329 LTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKI-DEA 387
Query: 334 SVLI 337
+ L+
Sbjct: 388 TQLV 391
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 118/257 (45%), Gaps = 1/257 (0%)
Query: 222 GRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLK-GCVPNEVT 280
G + A L DEM FN L+SA L A K + K G P+ VT
Sbjct: 136 GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVT 195
Query: 281 YNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLE 340
YNT++ LCRKG ++ +S+ ++ N P+ ++F TL+ F ++ +G + ++
Sbjct: 196 YNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMK 255
Query: 341 ERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
+ N Y+S + GL + KF A+ L M +G P+ Y+ALI + +
Sbjct: 256 SKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLE 315
Query: 401 EAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILI 460
E + EMK KG P++ TY L+ + GD +A+ V +E + Y ++
Sbjct: 316 EVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVV 375
Query: 461 NGLCKNGKLMEAMMVWK 477
L GK+ EA + K
Sbjct: 376 ERLMGAGKIDEATQLVK 392
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 107/198 (54%), Gaps = 3/198 (1%)
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEK-GCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
+++L+S K + AM+ +KE+ EK G P+ V Y+ +I LCR+G D+ E+
Sbjct: 160 FNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEEL 219
Query: 410 KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKL 469
+ G P+ ++++L+ F+ + +W MK+ + + N Y+ + GL +N K
Sbjct: 220 EKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKF 279
Query: 470 MEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYN 529
+A+ + M + GI DV Y+++I + +++ MK +N+M +E L PD TY
Sbjct: 280 TDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEM--KEKGLTPDTVTYC 337
Query: 530 ILLNAFYQQNNISRAMDV 547
+L+ ++ ++ RA++V
Sbjct: 338 MLIPLLCKKGDLDRAVEV 355
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 121/260 (46%), Gaps = 1/260 (0%)
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE-GTFPNPFV 245
G+ + A ++F + NC +++ L+ ++DEA+ E+ + G P+
Sbjct: 136 GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVT 195
Query: 246 FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
+N +I ALC+KG + + + + G P+ +++NTL++ R+ + + + M
Sbjct: 196 YNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMK 255
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE 365
+ PN ++ + V G + + +D +++ ++ G + + Y++LI+ + E
Sbjct: 256 SKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLE 315
Query: 366 HAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
M+ + EM EKG P+TV Y LI LC++G D A E E L Y ++
Sbjct: 316 EVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVV 375
Query: 426 RGFFEAGDCHKAILVWKEMK 445
AG +A + K K
Sbjct: 376 ERLMGAGKIDEATQLVKNGK 395
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 97/202 (48%), Gaps = 3/202 (1%)
Query: 362 GKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK-GHLPNSFT 420
G EHA +L+ EM E CE ++AL+ K DEA + E+ K G P+ T
Sbjct: 136 GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVT 195
Query: 421 YSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQML 480
Y+++++ G + +++E++ N + + ++ L+ + +E +W M
Sbjct: 196 YNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMK 255
Query: 481 SRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNN 540
S+ + ++ +Y+S + G + + L + M + + PDV TYN L+ A+ NN
Sbjct: 256 SKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEG--ISPDVHTYNALITAYRVDNN 313
Query: 541 ISRAMDVLNIMLDQGCDPDFIT 562
+ M N M ++G PD +T
Sbjct: 314 LEEVMKCYNEMKEKGLTPDTVT 335
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 141/327 (43%), Gaps = 12/327 (3%)
Query: 191 QAVEVFRGIHLRNCAPDSY-TYSTLMDGLCKEGRIDEAVSLLDE-MQIEGTFPN----PF 244
Q VE F+ R+C +S+ L + R + S +DE +Q + F + F
Sbjct: 69 QKVEKFK----RSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDF 124
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM 304
V +++ G A KL D M C ++N L+ KL++A+ ++
Sbjct: 125 VIRIML-LYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKEL 183
Query: 305 VAN-KCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGK 363
P+ VT+ T++ ++G D S+ LE+ G + +++L+ ++
Sbjct: 184 PEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRREL 243
Query: 364 FEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSS 423
F ++W M K PN Y++ + GL R K +A + MK +G P+ TY++
Sbjct: 244 FVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNA 303
Query: 424 LMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRG 483
L+ + + + + + EMK + V Y +LI LCK G L A+ V ++ +
Sbjct: 304 LITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHK 363
Query: 484 IKLDVVAYSSMIHGFCNAQLVDQGMKL 510
+ Y ++ A +D+ +L
Sbjct: 364 LLSRPNMYKPVVERLMGAGKIDEATQL 390
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 152/331 (45%), Gaps = 2/331 (0%)
Query: 167 LNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDE 226
L + P TFN+++ ++ A V R + D Y+TL+ K G++D
Sbjct: 461 LILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDA 520
Query: 227 AVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVD 286
+ +M G N F LI + G + +A + K P+ V +N L+
Sbjct: 521 MFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALIS 580
Query: 287 GLCRKGKLNKAVSLLNQMVA--NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGH 344
+ G +++A +L +M A + P+ ++ G L+ G+ V + + G
Sbjct: 581 ACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGI 640
Query: 345 RGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE 404
RG +Y+ ++ K G ++ A ++K+M EK P+ V +SALID DEA
Sbjct: 641 RGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFG 700
Query: 405 YLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLC 464
L + K++G + +YSSLM A D KA+ +++++K+ + LI LC
Sbjct: 701 ILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALC 760
Query: 465 KNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
+ +L +AM ++ + G+K + + YS ++
Sbjct: 761 EGNQLPKAMEYLDEIKTLGLKPNTITYSMLM 791
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 184/415 (44%), Gaps = 38/415 (9%)
Query: 189 VDQAVEVF--RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQ----------- 235
+D+++ F R L N S S + L ++GRI + +SLL+++
Sbjct: 379 IDESMPQFPARNFELHNSNGRSPETSDAYNRLLRDGRIKDCISLLEDLDQRDLLDMDKIY 438
Query: 236 -------------IEGTF--------PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGC 274
++ F P FN+L+S D+ A ++ + G
Sbjct: 439 HASFFKACKKQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGM 498
Query: 275 VPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGAS 334
+ Y TL+ + GK++ + +QM + N TFG L+ G + G+ +
Sbjct: 499 TADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFG 558
Query: 335 VLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG--CEPNTVVYSALIDG 392
L + + + ++++LIS + G + A + EM + +P+ + AL+
Sbjct: 559 AYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKA 618
Query: 393 LCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHN 452
C G+ + A+E + G Y+ + ++GD A ++K+MK +
Sbjct: 619 CCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPD 678
Query: 453 EVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFN 512
EV +S LI+ L EA + + S+GI+L ++YSS++ CNA+ + ++L+
Sbjct: 679 EVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYE 738
Query: 513 QMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
++ + +L+P ++T N L+ A + N + +AM+ L+ + G P+ IT + +
Sbjct: 739 KI--KSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLM 791
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 165/406 (40%), Gaps = 52/406 (12%)
Query: 68 SFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRM 127
+F L+ A+S D +L+ ++ K + + + K+ + +FH+M
Sbjct: 469 TFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQM 528
Query: 128 -----EAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKA 182
EA H +F ++++ + G +A Y + +S N++P+ + FN +I A
Sbjct: 529 SNSGVEANLH------TFGALIDGCARAGQVAKAFGAYG-ILRSKNVKPDRVVFNALISA 581
Query: 183 LCKVGLVDQAVEVFRGIHLRN--CAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTF 240
+ G VD+A +V + PD + LM C G+++ A + + G
Sbjct: 582 CGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIR 641
Query: 241 PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSL 300
P V+ + +++ K GD A + +M K P+EV ++ L+D
Sbjct: 642 GTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID-------------- 687
Query: 301 LNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFK 360
VA D FG +L + +G R YSSL+
Sbjct: 688 ----VAGHAKMLDEAFG-----------------ILQDAKSQGIRLGTISYSSLMGACCN 726
Query: 361 EGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFT 420
++ A++L++++ P +ALI LC + +A EYL E+K G PN+ T
Sbjct: 727 AKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTIT 786
Query: 421 YSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEV-CYSILINGLCK 465
YS LM D + + + K + + N + C I LCK
Sbjct: 787 YSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCR--CITSLCK 830
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 131/246 (53%), Gaps = 5/246 (2%)
Query: 205 APDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE---GTFPNPFVFNVLISALCKKGDLIR 261
APDS Y+TLM G K GR+ + +L+ M+ + + P+ + ++SA G + R
Sbjct: 411 APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 262 AAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCV-PNDVTFGTLV 320
A +++ M+ G N +TYN L+ G C++ ++++A LL +M + + P+ V++ ++
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 321 HGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM-EKGC 379
G + ++ + + RG + Y++L+ G+ + A +++ EMM +
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRV 590
Query: 380 EPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAIL 439
+ + + ++ L++G CR G ++A+ + MK G PN TY SL G +A A+L
Sbjct: 591 KVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALL 650
Query: 440 VWKEMK 445
+WKE+K
Sbjct: 651 LWKEIK 656
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 138/307 (44%), Gaps = 22/307 (7%)
Query: 275 VPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVAN---KCVPNDVTFGTLVHGFVKQGRASD 331
P+ Y TL+ G + G++ +L M P++VT+ T+V FV G
Sbjct: 411 APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 332 GASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEK-GCEPNTVVYSALI 390
VL + G N Y+ L+ G K+ + + A L +EM E G EP+ V Y+ +I
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 391 DGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNS-C 449
DG + A + EM+ +G P +Y++LM+ F +G A V+ EM N+
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRV 590
Query: 450 NHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMK 509
+ + +++L+ G C+ G + +A V +M G +V Y S+ +G A+ +
Sbjct: 591 KVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALL 650
Query: 510 LFNQM--LC----QEAE-----------LQPDVATYNILLNAFYQQNNISRAMDVLNIML 552
L+ ++ C +EA L+PD + L + + +A++++ M
Sbjct: 651 LWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACME 710
Query: 553 DQGCDPD 559
+ G P+
Sbjct: 711 ENGIPPN 717
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 2/212 (0%)
Query: 168 NIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEA 227
N P+ +T+ V+ A GL+D+A +V + + TY+ L+ G CK+ +ID A
Sbjct: 447 NSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRA 506
Query: 228 VSLLDEM-QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVD 286
LL EM + G P+ +N++I D A + M +G P +++Y TL+
Sbjct: 507 EDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMK 566
Query: 287 GLCRKGKLNKAVSLLNQMVANKCVPND-VTFGTLVHGFVKQGRASDGASVLISLEERGHR 345
G+ A + ++M+ + V D + + LV G+ + G D V+ ++E G
Sbjct: 567 AFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFY 626
Query: 346 GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEK 377
N Y SL +G+ + K A+ LWKE+ E+
Sbjct: 627 PNVATYGSLANGVSQARKPGDALLLWKEIKER 658
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 110/247 (44%), Gaps = 5/247 (2%)
Query: 171 PNGLTFNLVIKALCKVGLV-DQA--VEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEA 227
P+ + ++K K G V D A +E R RN PD TY+T++ G +D A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 228 VSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLK-GCVPNEVTYNTLVD 286
+L EM G N +NVL+ CK+ + RA L+ M+ G P+ V+YN ++D
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 287 GLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRG 346
G A++ N+M P +++ TL+ F G+ V +
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVK 591
Query: 347 NEYI-YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREY 405
+ I ++ L+ G + G E A ++ M E G PN Y +L +G+ + K +A
Sbjct: 592 VDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLL 651
Query: 406 LIEMKNK 412
E+K +
Sbjct: 652 WKEIKER 658
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/451 (20%), Positives = 180/451 (39%), Gaps = 60/451 (13%)
Query: 175 TFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGR--IDEAVSLL- 231
+ L+ A K G AV V + + P ++ + L G +E++ L
Sbjct: 155 SLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEESIKLFI 214
Query: 232 ----------DEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTY 281
D+ + + P+ FN +++A GD + KL + MS C P+ +TY
Sbjct: 215 AITRRVKRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTY 274
Query: 282 NTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEE 341
N ++ R G+ V +L +++ T +LV +V G ++ ++ E
Sbjct: 275 NVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMRE 334
Query: 342 R-------------------------------------GHRGNEYIYSSLISGLFKEGKF 364
+ G+ + + + +FK+
Sbjct: 335 KRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKK-LL 393
Query: 365 EHAMQLWKE--MMEKGCEPNTVVYSALIDGLCREGK-ADEAR--EYLIEMKNKGHLPNSF 419
+++ E ++ K P++ +Y+ L+ G + G+ AD AR E + ++ P+
Sbjct: 394 PNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEV 453
Query: 420 TYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM 479
TY++++ F AG +A V EM N + Y++L+ G CK ++ A + ++M
Sbjct: 454 TYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREM 513
Query: 480 L-SRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQ 538
GI+ DVV+Y+ +I G + FN+M + + P +Y L+ AF
Sbjct: 514 TEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTR--GIAPTKISYTTLMKAFAMS 571
Query: 539 NNISRAMDVLNIML-DQGCDPDFITCDIFLK 568
A V + M+ D D I ++ ++
Sbjct: 572 GQPKLANRVFDEMMNDPRVKVDLIAWNMLVE 602
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 134/327 (40%), Gaps = 31/327 (9%)
Query: 69 FYSLIEKLAASSDFASLEELLQQMKRE--RRVFI-EKNFIVIFKAYGKAHFPEKAVNLFH 125
+ +L++ + A +L+ M+R+ R E + + A+ A ++A +
Sbjct: 417 YTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLA 476
Query: 126 RMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCK 185
M A ++N +L ++ RA + + + I+P+ +++N++I
Sbjct: 477 EM-ARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCIL 535
Query: 186 VGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFV 245
+ A+ F + R AP +Y+TLM G+ A + DEM + +
Sbjct: 536 IDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLI 595
Query: 246 -FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM 304
+N+L+ C+ G + A ++V M G PN TY +L +G+ + K A+ L ++
Sbjct: 596 AWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEI 655
Query: 305 -----VANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
V K P+D + SD A ++ + +E + +L
Sbjct: 656 KERCAVKKKEAPSDSS--------------SDPAPPML-------KPDEGLLDTLADICV 694
Query: 360 KEGKFEHAMQLWKEMMEKGCEPNTVVY 386
+ F+ A+++ M E G PN Y
Sbjct: 695 RAAFFKKALEIIACMEENGIPPNKTKY 721
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 162/353 (45%), Gaps = 11/353 (3%)
Query: 69 FYSLIEKLAASSDFASLEELLQQMKRERRVFI-EKNFIVIFKAYGKAHFPEKAVNLFHRM 127
++S+I L F + L+ +M++ + + +++ + Y H KA+N FH
Sbjct: 164 YHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAY 223
Query: 128 EAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV- 186
+ F + + F S+L+ + + + A C + +FN+V+ C V
Sbjct: 224 K-RFKLEMGIDDFQSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSFNIVLNGWCNVI 280
Query: 187 GLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
G +A V+ + D +YS+++ K G +++ + L D M+ E P+ V+
Sbjct: 281 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVY 340
Query: 247 NVLISALCKKGDLIRAAKLVDNMSL-KGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
N ++ AL K + A L+ M KG PN VTYN+L+ LC+ K +A + ++M+
Sbjct: 341 NAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEML 400
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGA-SVLISLEERGHRGNEYIYSSLISGLFKEGKF 364
P T+ H F++ R + +L + + G Y LI L + F
Sbjct: 401 EKGLFPTIRTY----HAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDF 456
Query: 365 EHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
++ + LW EM EK P+ Y +I GL GK +EA Y EMK+KG PN
Sbjct: 457 DNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 173/374 (46%), Gaps = 6/374 (1%)
Query: 135 QTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVE 194
++V+ ++S+++++ + F A + K N T ++I+ C V V +A+
Sbjct: 159 RSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAIN 218
Query: 195 VFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALC 254
F + +L+ LC+ + +A L+ + + F + FN++++ C
Sbjct: 219 TFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPF-DAKSFNIVLNGWC 277
Query: 255 KK-GDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPND 313
G A ++ M G + V+Y++++ + G LNK + L ++M P+
Sbjct: 278 NVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDR 337
Query: 314 VTFGTLVHGFVKQGRASDGASVLISLEE-RGHRGNEYIYSSLISGLFKEGKFEHAMQLWK 372
+ +VH K S+ +++ ++EE +G N Y+SLI L K K E A Q++
Sbjct: 338 KVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFD 397
Query: 373 EMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAG 432
EM+EKG P Y A + + R G +E E L +M+ G P TY L+R
Sbjct: 398 EMLEKGLFPTIRTYHAFMR-ILRTG--EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWR 454
Query: 433 DCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYS 492
D +L+W EMK + + Y ++I+GL NGK+ EA +K+M +G++ +
Sbjct: 455 DFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVED 514
Query: 493 SMIHGFCNAQLVDQ 506
+ F Q +Q
Sbjct: 515 MIQSWFSGKQYAEQ 528
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 138/298 (46%), Gaps = 10/298 (3%)
Query: 57 HKWGSYKL--GDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKA 114
H + +KL G F SL+ L + + L+ +++ F K+F ++ +
Sbjct: 221 HAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIF-CNKDKYPFDAKSFNIVLNGWCNV 279
Query: 115 -HFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNG 173
P +A ++ M K V S++S+++ + G ++ L+ + + K I+P+
Sbjct: 280 IGSPREAERVWMEM-GNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKEC-IEPDR 337
Query: 174 LTFNLVIKALCKVGLVDQAVEVFRGIHL-RNCAPDSYTYSTLMDGLCKEGRIDEAVSLLD 232
+N V+ AL K V +A + + + + P+ TY++L+ LCK + +EA + D
Sbjct: 338 KVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFD 397
Query: 233 EMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKG 292
EM +G FP ++ + L + G+ + +L+ M GC P TY L+ LCR
Sbjct: 398 EMLEKGLFPTIRTYHAFMRIL-RTGEEV--FELLAKMRKMGCEPTVETYIMLIRKLCRWR 454
Query: 293 KLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYI 350
+ + L ++M P+ ++ ++HG G+ + ++++G R NE +
Sbjct: 455 DFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENV 512
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 153/353 (43%), Gaps = 11/353 (3%)
Query: 211 YSTLMDGLCKEGRIDEAVSLLDEM-QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNM 269
Y +++ L K + D A +L+DEM + + N ++I C D+ +A
Sbjct: 164 YHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAY 223
Query: 270 SLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDV-TFGTLVHGFVKQ-G 327
+ +L+ LCR ++ A L+ P D +F +++G+ G
Sbjct: 224 KRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSFNIVLNGWCNVIG 281
Query: 328 RASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYS 387
+ V + + G + + YSS+IS K G ++L+ M ++ EP+ VY+
Sbjct: 282 SPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYN 341
Query: 388 ALIDGLCREGKADEAREYLIEMKN-KGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKN 446
A++ L + EAR + M+ KG PN TY+SL++ +A +A V+ EM
Sbjct: 342 AVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLE 401
Query: 447 NSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQ 506
Y + L ++ E + ++M G + V Y +I C + D
Sbjct: 402 KGLFPTIRTYHAFMRILRTGEEVFELLAKMRKM---GCEPTVETYIMLIRKLCRWRDFDN 458
Query: 507 GMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
+ L+++M +E + PD+++Y ++++ + I A M D+G P+
Sbjct: 459 VLLLWDEM--KEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 29/248 (11%)
Query: 386 YSALIDGLCREGKADEAREYLIEMKNKGHLP-NSFTYSSLMRGFFEA-GDCHKAILVWKE 443
+ +L+ LCR +A + NK P ++ +++ ++ G+ G +A VW E
Sbjct: 235 FQSLLSALCRYKNVSDAGHLIF--CNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWME 292
Query: 444 MKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQL 503
M N H+ V YS +I+ K G L + + ++ +M I+ D Y++++H A
Sbjct: 293 MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASF 352
Query: 504 VDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITC 563
V + L M +E ++P+V TYN L+ + A V + ML++G P T
Sbjct: 353 VSEARNLMKTME-EEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTY 411
Query: 564 DIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVV 623
F++ LR E V L+ + R +G P T+ +++
Sbjct: 412 HAFMRILRTG------------EEVFELLAKMRKMGCE------------PTVETYIMLI 447
Query: 624 QQLCKPRN 631
++LC+ R+
Sbjct: 448 RKLCRWRD 455
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 93/221 (42%), Gaps = 31/221 (14%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
+S+ S+I + + +L +MK+E K + + A KA F +A NL
Sbjct: 303 VSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKT 362
Query: 127 MEAEFHCKQTVKSFNS----------------VLNVIIQEGHFHRALEFYSHV------- 163
ME E + V ++NS V + ++++G F +++ +
Sbjct: 363 MEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGE 422
Query: 164 --------CKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLM 215
+ + +P T+ ++I+ LC+ D + ++ + + PD +Y ++
Sbjct: 423 EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMI 482
Query: 216 DGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
GL G+I+EA EM+ +G PN V +++ S K
Sbjct: 483 HGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGK 523
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 191/438 (43%), Gaps = 16/438 (3%)
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRG 198
++ ++++V + G AL + + K + +QP+ +T +V++ K +A E F+
Sbjct: 224 TYGTLIDVYSKGGLKVHALCWLGKMSK-IGMQPDEVTTGIVLQMYKKAREFQKAEEFFKK 282
Query: 199 IHLRNCAPDS------YTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISA 252
DS YTY+T++D K G+I EA M EG P FN +I
Sbjct: 283 WSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHI 342
Query: 253 LCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPN 312
G L L+ M L C P+ TYN L+ + + +A + +M + P+
Sbjct: 343 YGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPD 401
Query: 313 DVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWK 372
V++ TL++ F + + ++ +++ +EY S+L + ++ E + W
Sbjct: 402 PVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSAL-TRMYVEAEMLEKSWSWF 460
Query: 373 EMMEKGCEPNTVVYSALIDGLCREGKADEAREYLI--EMKNKGHLPNSFTYSSLMRGFFE 430
+ ++ YSA ID G EA I + NK + Y+ +++ +
Sbjct: 461 KRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTV---IEYNVMIKAYGI 517
Query: 431 AGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVA 490
+ C KA +++ M + ++ Y+ L+ L + ++M G D +
Sbjct: 518 SKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIP 577
Query: 491 YSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNI 550
Y ++I F ++ +++ +M+ E ++PDV Y +L+NAF N+ +AM +
Sbjct: 578 YCAVISSFVKLGQLNMAEEVYKEMV--EYNIEPDVVVYGVLINAFADTGNVQQAMSYVEA 635
Query: 551 MLDQGCDPDFITCDIFLK 568
M + G + + + +K
Sbjct: 636 MKEAGIPGNSVIYNSLIK 653
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/506 (20%), Positives = 213/506 (42%), Gaps = 25/506 (4%)
Query: 64 LGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNL 123
L ++ ++I+ S E ++M E V F + YG + +L
Sbjct: 296 LSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSL 355
Query: 124 FHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKAL 183
M+ HC +++N ++++ + RA ++ + K ++P+ +++ ++ A
Sbjct: 356 MKTMK--LHCAPDTRTYNILISLHTKNNDIERAGAYFKEM-KDDGLKPDPVSYRTLLYAF 412
Query: 184 CKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNP 243
+V++A + + N D YT S L + ++++ S + G +
Sbjct: 413 SIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSE 472
Query: 244 FVFNVLISALCKKGDLIRAAKL------VDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
++ I A ++G L A ++ V+ ++ + YN ++ KA
Sbjct: 473 G-YSANIDAYGERGYLSEAERVFICCQEVNKRTV-------IEYNVMIKAYGISKSCEKA 524
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
L M++ P+ T+ TLV G L + E G+ + Y ++IS
Sbjct: 525 CELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISS 584
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
K G+ A +++KEM+E EP+ VVY LI+ G +A Y+ MK G N
Sbjct: 585 FVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGN 644
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNE----VCYSILINGLCKNGKLMEAM 473
S Y+SL++ + + G +A +++++ SCN + + +IN + + +A
Sbjct: 645 SVIYNSLIKLYTKVGYLDEAEAIYRKLL-QSCNKTQYPDVYTSNCMINLYSERSMVRKAE 703
Query: 474 MVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLN 533
++ M RG + + ++ M+ + ++ ++ QM +E ++ D +YN +L
Sbjct: 704 AIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQM--REMKILTDPLSYNSVLG 760
Query: 534 AFYQQNNISRAMDVLNIMLDQGCDPD 559
F A++ M+ G PD
Sbjct: 761 LFALDGRFKEAVETFKEMVSSGIQPD 786
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/471 (20%), Positives = 197/471 (41%), Gaps = 30/471 (6%)
Query: 190 DQAVEVFRGIHLRNCAP-DSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNV 248
++AVE+F + C + Y+ ++ L K + SL DEM +G P +
Sbjct: 168 ERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGT 227
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLL------- 301
LI K G + A + MS G P+EVT ++ + + KA
Sbjct: 228 LIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDE 287
Query: 302 NQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKE 361
N+ ++ C+ + T+ T++ + K G+ + + + E G ++++I
Sbjct: 288 NKADSHVCL-SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNN 346
Query: 362 GKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTY 421
G+ L K M+ C P+T Y+ LI + + A Y EMK+ G P+ +Y
Sbjct: 347 GQLGEVTSLMK-TMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSY 405
Query: 422 SSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLS 481
+L+ F +A + EM +++ +E S L + +++E W +
Sbjct: 406 RTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTR-MYVEAEMLEKSWSWFKRFH 464
Query: 482 RGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNI 541
+ YS+ I + + + ++F + CQE + V YN+++ A+ +
Sbjct: 465 VAGNMSSEGYSANIDAYGERGYLSEAERVF--ICCQEVN-KRTVIEYNVMIKAYGISKSC 521
Query: 542 SRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDEL-------------- 587
+A ++ M+ G PD T + ++ L + + P GR +L+++
Sbjct: 522 EKACELFESMMSYGVTPDKCTYNTLVQILA-SADMPHKGRCYLEKMRETGYVSDCIPYCA 580
Query: 588 -VVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAIS 637
+ VK + A ++ + M++ + P+ + +++ N+++A+S
Sbjct: 581 VISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMS 631
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 158/344 (45%), Gaps = 12/344 (3%)
Query: 96 RRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHR 155
+R IE N V+ KAYG + EKA LF M + + ++N+++ ++ H+
Sbjct: 502 KRTVIEYN--VMIKAYGISKSCEKACELFESMMS-YGVTPDKCTYNTLVQILASADMPHK 558
Query: 156 ALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLM 215
Y + + + + VI + K+G ++ A EV++ + N PD Y L+
Sbjct: 559 G-RCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLI 617
Query: 216 DGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGC- 274
+ G + +A+S ++ M+ G N ++N LI K G L A + + L+ C
Sbjct: 618 NAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKL-LQSCN 676
Query: 275 ---VPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASD 331
P+ T N +++ + + KA ++ + M + N+ TF ++ + K GR +
Sbjct: 677 KTQYPDVYTSNCMINLYSERSMVRKAEAIFDSM-KQRGEANEFTFAMMLCMYKKNGRFEE 735
Query: 332 GASVLISLEERGHRGNEYIYSSLISGLFK-EGKFEHAMQLWKEMMEKGCEPNTVVYSALI 390
+ + E + Y+S++ GLF +G+F+ A++ +KEM+ G +P+ + +L
Sbjct: 736 ATQIAKQMREMKILTDPLSYNSVL-GLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLG 794
Query: 391 DGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDC 434
L + G + +A + E++ K + S + GDC
Sbjct: 795 TILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIGDC 838
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 146/315 (46%), Gaps = 5/315 (1%)
Query: 134 KQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAV 193
K+TV +N ++ +A E + + S + P+ T+N +++ L + +
Sbjct: 502 KRTVIEYNVMIKAYGISKSCEKACELFESMM-SYGVTPDKCTYNTLVQILASADMPHKGR 560
Query: 194 EVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISAL 253
+ D Y ++ K G+++ A + EM P+ V+ VLI+A
Sbjct: 561 CYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAF 620
Query: 254 CKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA--NKC-V 310
G++ +A V+ M G N V YN+L+ + G L++A ++ +++ NK
Sbjct: 621 ADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQY 680
Query: 311 PNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQL 370
P+ T +++ + ++ ++ S+++RG NE+ ++ ++ K G+FE A Q+
Sbjct: 681 PDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGE-ANEFTFAMMLCMYKKNGRFEEATQI 739
Query: 371 WKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFE 430
K+M E + + Y++++ +G+ EA E EM + G P+ T+ SL +
Sbjct: 740 AKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMK 799
Query: 431 AGDCHKAILVWKEMK 445
G KA+ +E++
Sbjct: 800 LGMSKKAVRKIEEIR 814
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/438 (20%), Positives = 191/438 (43%), Gaps = 16/438 (3%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
+S+ +L+ + E L+ +M + E + + Y +A EK+ + F R
Sbjct: 403 VSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKR 462
Query: 127 MEAEFHCKQTVKS--FNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALC 184
FH + S +++ ++ + G+ A + C+ +N + + +N++IKA
Sbjct: 463 ----FHVAGNMSSEGYSANIDAYGERGYLSEAERVFI-CCQEVN-KRTVIEYNVMIKAYG 516
Query: 185 KVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPF 244
++A E+F + PD TY+TL+ L + L++M+ G +
Sbjct: 517 ISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCI 576
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM 304
+ +IS+ K G L A ++ M P+ V Y L++ G + +A+S + M
Sbjct: 577 PYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAM 636
Query: 305 VANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEE---RGHRGNEYIYSSLISGLFKE 361
N V + +L+ + K G + ++ L + + + Y + +I+ +
Sbjct: 637 KEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSER 696
Query: 362 GKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTY 421
A ++ M ++G E N ++ ++ + G+ +EA + +M+ L + +Y
Sbjct: 697 SMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSY 755
Query: 422 SSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMM----VWK 477
+S++ F G +A+ +KEM ++ ++ + L L K G +A+ + K
Sbjct: 756 NSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRK 815
Query: 478 QMLSRGIKLDVVAYSSMI 495
+ + RG++L + SS++
Sbjct: 816 KEIKRGLELWISTLSSLV 833
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 158/354 (44%), Gaps = 43/354 (12%)
Query: 63 KLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNF----IVIFKAYGKAHFPE 118
++ ++F + +E LA F+++ LL R + F IV+ Y +A+ +
Sbjct: 77 RIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVL---YAQANMLD 133
Query: 119 KAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNL 178
++ +F +E +F +TVKS N++L + + A Y + K I+P+ T+N
Sbjct: 134 HSLRVFRDLE-KFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNR 192
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG 238
+IK C+ G + + + + P+S ++ ++ G E + DE +L M+ G
Sbjct: 193 MIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRG 252
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAV 298
+N+ I +LCK+ A L+D M G PN VTY+ L+ G C + +A
Sbjct: 253 VNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAK 312
Query: 299 SLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGL 358
L MV C P+ + TL++ L
Sbjct: 313 KLFKIMVNRGCKPDSECYFTLIY-----------------------------------YL 337
Query: 359 FKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK 412
K G FE A+ L KE MEK P+ + +L++GL ++ K +EA+E + ++K K
Sbjct: 338 CKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 126/261 (48%), Gaps = 9/261 (3%)
Query: 231 LDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMS-LKGCVPNEVTYNTLVDGLC 289
L++ +I T + N L+ A D A ++ M + G P+ TYN ++ C
Sbjct: 142 LEKFEISRTVKS---LNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFC 198
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEY 349
G + + S++ +M PN +FG ++ GF + ++ + VL +++RG
Sbjct: 199 ESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVS 258
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
Y+ I L K K + A L M+ G +PNTV YS LI G C E +EA++ M
Sbjct: 259 TYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIM 318
Query: 410 KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKE-MKNNSCNHNEVCYSILINGLCKNGK 468
N+G P+S Y +L+ + GD A+ + KE M+ N + S L+NGL K+ K
Sbjct: 319 VNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKS-LVNGLAKDSK 377
Query: 469 LMEAMMVW---KQMLSRGIKL 486
+ EA + K+ +R ++L
Sbjct: 378 VEEAKELIGQVKEKFTRNVEL 398
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 141/312 (45%), Gaps = 23/312 (7%)
Query: 258 DLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFG 317
++ RAA L + C + + ++ V+ L K + +LL+ + N+ P+ +
Sbjct: 65 EICRAASLTPD-----CRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENR--PDLKSER 117
Query: 318 TLVHGFVKQGRAS---DGASVLISLEE----RGHRG-NEYIYSSLISGLFKEGKFEHAMQ 369
H V +A+ V LE+ R + N +++ L++ +KE K +
Sbjct: 118 FAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAK-----R 172
Query: 370 LWKEMMEK-GCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGF 428
++ EM + G EP+ Y+ +I C G A + + EM+ KG PNS ++ ++ GF
Sbjct: 173 VYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGF 232
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
+ + V MK+ N Y+I I LCK K EA + MLS G+K +
Sbjct: 233 YAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNT 292
Query: 489 VAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL 548
V YS +IHGFCN ++ KLF M+ + +PD Y L+ + + A+ +
Sbjct: 293 VTYSHLIHGFCNEDDFEEAKKLFKIMVNRGC--KPDSECYFTLIYYLCKGGDFETALSLC 350
Query: 549 NIMLDQGCDPDF 560
+++ P F
Sbjct: 351 KESMEKNWVPSF 362
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%)
Query: 311 PNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQL 370
P+ T+ ++ F + G AS S++ +E +G + N + +ISG + E K + ++
Sbjct: 185 PDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKV 244
Query: 371 WKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFE 430
M ++G Y+ I LC+ K+ EA+ L M + G PN+ TYS L+ GF
Sbjct: 245 LAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCN 304
Query: 431 AGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVA 490
D +A ++K M N C + CY LI LCK G A+ + K+ + +
Sbjct: 305 EDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSI 364
Query: 491 YSSMIHGFCNAQLVDQGMKLFNQM 514
S+++G V++ +L Q+
Sbjct: 365 MKSLVNGLAKDSKVEEAKELIGQV 388
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 179/390 (45%), Gaps = 9/390 (2%)
Query: 132 HCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQ 191
+C+ T +++ V+ + + H+ S F VI A G +++
Sbjct: 67 NCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEE 126
Query: 192 AVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE----GTFPNPFVFN 247
A+EVF I C P +YT + L+ L ++ +++ L+ E+ ++ G F
Sbjct: 127 AIEVFFKIPNFRCVPSAYTLNALLLVLVRKR---QSLELVPEILVKACRMGVRLEESTFG 183
Query: 248 VLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLN--KAVSLLNQMV 305
+LI ALC+ G++ A +LV MS + + Y+ L+ +C+ + + L +
Sbjct: 184 ILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLR 243
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE 365
+ P + ++ V+ GR + SVL ++ + Y+ ++ G+ + +
Sbjct: 244 KTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYP 303
Query: 366 HAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
A +L+ E++ G P+ Y+ I+GLC++ + A + + M G PN TY+ L+
Sbjct: 304 KADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILI 363
Query: 426 RGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIK 485
+ +AGD +A +WKEM+ N N N + I+I+ + +++ A + ++ + +
Sbjct: 364 KALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVF 423
Query: 486 LDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
+ +I C L+DQ ++L ++
Sbjct: 424 VKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 161/344 (46%), Gaps = 8/344 (2%)
Query: 229 SLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNM--SLKGCVPNEVTYNTLVD 286
+LL Q+ P P + +I L K L + ++ ++ S K P E + ++
Sbjct: 58 TLLSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTP-ESIFRDVIA 116
Query: 287 GLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASD-GASVLISLEERGHR 345
G++ +A+ + ++ +CVP+ T L+ V++ ++ + +L+ G R
Sbjct: 117 AYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVR 176
Query: 346 GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD--EAR 403
E + LI L + G+ + A +L + M + + +YS L+ +C+ + +
Sbjct: 177 LEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVI 236
Query: 404 EYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGL 463
YL +++ P Y+ +MR E G + + V +MK + + VCY+I++ G+
Sbjct: 237 GYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGV 296
Query: 464 CKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQP 523
+ +A ++ ++L G+ DV Y+ I+G C ++ +K+ + M + +P
Sbjct: 297 IADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSM--NKLGSEP 354
Query: 524 DVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
+V TYNIL+ A + ++SRA + M G + + T DI +
Sbjct: 355 NVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMI 398
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 144/315 (45%), Gaps = 16/315 (5%)
Query: 265 LVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM-VANKCVPNDVTFGTLVHGF 323
L+ + L C P Y ++ L + +L S+L + V+ K + F ++ +
Sbjct: 59 LLSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAY 118
Query: 324 VKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGC---- 379
GR + V + + Y ++L+ L ++ +++L E++ K C
Sbjct: 119 GFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRK---RQSLELVPEILVKACRMGV 175
Query: 380 --EPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGD--CH 435
E +T + LID LCR G+ D A E + M + + YS L+ + D C
Sbjct: 176 RLEEST--FGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCF 233
Query: 436 KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
I ++++ + Y++++ L + G+ E + V QM ++ D+V Y+ ++
Sbjct: 234 DVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVL 293
Query: 496 HGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQG 555
G + + KLF+++ L PDV TYN+ +N +QN+I A+ +++ M G
Sbjct: 294 QGVIADEDYPKADKLFDEL--LLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLG 351
Query: 556 CDPDFITCDIFLKTL 570
+P+ +T +I +K L
Sbjct: 352 SEPNVVTYNILIKAL 366
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 181/395 (45%), Gaps = 12/395 (3%)
Query: 132 HCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQ 191
+ + TV + N+++ + + + ++ + + K NI PN +++N +I A C G VD+
Sbjct: 175 NTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDE 234
Query: 192 AVEVFRGIHLRNC--APDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVL 249
A+EV+R I L N AP S TY L GL + GRI +A SLL EM +G + V+N L
Sbjct: 235 ALEVYRHI-LANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNL 293
Query: 250 ISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC 309
I GD +A + D + K V + + T ++ KG +A+ ++ K
Sbjct: 294 IRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKF 353
Query: 310 VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGL-----FKEGKF 364
+ T L+ F+K G+ + ++ + + N +S G+ FK G+F
Sbjct: 354 RMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEF 413
Query: 365 EHAMQLWKEMMEKGCEPNTVV----YSALIDGLCREGKADEAREYLIEMKNKGHLPNSFT 420
A+ +K++ K V+ Y ++ C +G EA + E ++ ++ +
Sbjct: 414 SEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPS 473
Query: 421 YSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQML 480
+ +++ + +A A+ + M + + + + L KNGKL E+ V +M
Sbjct: 474 HRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMG 533
Query: 481 SRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
R K D Y ++ G C+ +DQ + +M+
Sbjct: 534 EREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMI 568
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 199/430 (46%), Gaps = 52/430 (12%)
Query: 218 LCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSL------ 271
L + +D A L + T P F N +I+A+ RA + +++SL
Sbjct: 155 LIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAM------YRAKRYSESISLFQYFFK 208
Query: 272 -KGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC-VPNDVTFGTLVHGFVKQGRA 329
VPN V+YN +++ C +G +++A+ + ++AN P+ VT+ L G V+ GR
Sbjct: 209 QSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRI 268
Query: 330 SDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSAL 389
D AS+L + +G + +Y++LI G G F+ A++ + E+ K + +V +
Sbjct: 269 GDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATF 328
Query: 390 IDGLCREGKADEAREY---LIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKN 446
++ +G EA E L++ K + H P T + L+ F + G +A ++ EM +
Sbjct: 329 MEYWFEKGNDKEAMESYRSLLDKKFRMHPP---TGNVLLEVFLKFGKKDEAWALFNEMLD 385
Query: 447 NSCNHN-----EVCYSILINGLCKNGKLMEAMMVWKQM----LSRGIKLDVVAYSSMIHG 497
N N I++N K G+ EA+ +K++ S+ +D + Y +++
Sbjct: 386 NHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTR 445
Query: 498 FCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCD 557
FC ++ + + F + + + L D ++ +++A+ + I A+ +L+ M+D
Sbjct: 446 FCEQGMLTEAERFFAEGVSRS--LPADAPSHRAMIDAYLKAERIDDAVKMLDRMVD---- 499
Query: 558 PDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEAS 617
+ L+ + D F + L+K + +++++ M +R P+ S
Sbjct: 500 -------VNLRVVAD----------FGARVFGELIKNGKLTESAEVLTKMGEREPKPDPS 542
Query: 618 TWAIVVQQLC 627
+ +VV+ LC
Sbjct: 543 IYDVVVRGLC 552
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 138/305 (45%), Gaps = 12/305 (3%)
Query: 251 SALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCV 310
SA K D A +L D+ S V + + V L R L+ A L Q V +
Sbjct: 121 SAPPPKRD-PNAPRLPDSTS--ALVGQRLNLHNRVQSLIRASDLDAASKLARQSVFSNTR 177
Query: 311 PNDVTFGTLVHGFVKQGRASDGASVLISLEERGH-RGNEYIYSSLISGLFKEGKFEHAMQ 369
P T ++ + R S+ S+ ++ + N Y+ +I+ EG + A++
Sbjct: 178 PTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALE 237
Query: 370 LWKEMMEKGC-EPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGF 428
+++ ++ P++V Y L GL + G+ +A L EM +KG +S Y++L+RG+
Sbjct: 238 VYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGY 297
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
+ GD KA+ + E+K+ ++ + + + + G EAM ++ +L + ++
Sbjct: 298 LDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHP 357
Query: 489 VAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYN-----ILLNAFYQQNNISR 543
+ ++ F D+ LFN+ML A P++ + N I++N ++ S
Sbjct: 358 PTGNVLLEVFLKFGKKDEAWALFNEMLDNHAP--PNILSVNSDTVGIMVNECFKMGEFSE 415
Query: 544 AMDVL 548
A++
Sbjct: 416 AINTF 420
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 153/328 (46%), Gaps = 3/328 (0%)
Query: 211 YSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMS 270
Y+ M K ++++ L DEM G P+ F +IS + G RA + + MS
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 271 LKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRAS 330
GC P+ VT ++D R G ++ A+SL ++ K + VTF TL+ + G
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 331 DGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALI 390
++ ++ G + N IY+ LI + + + A ++K+++ G PN Y+AL+
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALV 357
Query: 391 DGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKN-NSC 449
R D+A EMK KG Y++L+ + +A ++++MKN +C
Sbjct: 358 RAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETC 417
Query: 450 NHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMK 509
+ + +S LI +G++ EA QM G + + +S+I + A+ VD ++
Sbjct: 418 DPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVR 477
Query: 510 LFNQMLCQEAELQPDVATYNILLNAFYQ 537
F+Q+L E + PD LLN Q
Sbjct: 478 TFDQVL--ELGITPDDRFCGCLLNVMTQ 503
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 146/316 (46%), Gaps = 2/316 (0%)
Query: 117 PEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTF 176
PE A + + + + V +N + V + ++ + + + + I+P+ TF
Sbjct: 155 PETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLER-GIKPDNATF 213
Query: 177 NLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQI 236
+I + G+ +AVE F + C PD+ T + ++D + G +D A+SL D +
Sbjct: 214 TTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRART 273
Query: 237 EGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNK 296
E + F+ LI G+ + + M G PN V YN L+D + R + +
Sbjct: 274 EKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQ 333
Query: 297 AVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLIS 356
A + ++ N PN T+ LV + + D ++ ++E+G +Y++L+S
Sbjct: 334 AKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLS 393
Query: 357 GLFKEGKFEHAMQLWKEMME-KGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL 415
+ A +++++M + C+P++ +S+LI G+ EA L++M+ G
Sbjct: 394 MCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFE 453
Query: 416 PNSFTYSSLMRGFFEA 431
P F +S+++ + +A
Sbjct: 454 PTLFVLTSVIQCYGKA 469
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 149/328 (45%), Gaps = 3/328 (0%)
Query: 244 FVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQ 303
++NV + K DL ++ KL D M +G P+ T+ T++ + G +AV +
Sbjct: 176 ILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEK 235
Query: 304 MVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGK 363
M + C P++VT ++ + + G S+ R + +S+LI G
Sbjct: 236 MSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGN 295
Query: 364 FEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSS 423
++ + +++EM G +PN V+Y+ LID + R + +A+ ++ G PN TY++
Sbjct: 296 YDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAA 355
Query: 424 LMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLS-R 482
L+R + A A+ +++EMK + + Y+ L++ N + EA +++ M +
Sbjct: 356 LVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCE 415
Query: 483 GIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNIS 542
D +SS+I + + V + QM +EA +P + ++ + + +
Sbjct: 416 TCDPDSWTFSSLITVYACSGRVSEAEAALLQM--REAGFEPTLFVLTSVIQCYGKAKQVD 473
Query: 543 RAMDVLNIMLDQGCDPDFITCDIFLKTL 570
+ + +L+ G PD C L +
Sbjct: 474 DVVRTFDQVLELGITPDDRFCGCLLNVM 501
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 138/308 (44%), Gaps = 17/308 (5%)
Query: 270 SLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVP--------------NDVT 315
SL C PNE ++ G K AV LN M + P +
Sbjct: 118 SLDACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVIL 177
Query: 316 FGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM 375
+ + F K + + ERG + + ++++IS + G + A++ +++M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 376 EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCH 435
GCEP+ V +A+ID R G D A + + ++ T+S+L+R + +G+
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 436 KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
+ +++EMK N V Y+ LI+ + + + +A +++K +++ G + Y++++
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALV 357
Query: 496 HGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLD-Q 554
+ A+ D + ++ +M +E L V YN LL+ + A ++ M + +
Sbjct: 358 RAYGRARYGDDALAIYREM--KEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCE 415
Query: 555 GCDPDFIT 562
CDPD T
Sbjct: 416 TCDPDSWT 423
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 156/352 (44%), Gaps = 37/352 (10%)
Query: 62 YKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIV-IFKAYGKAHFPEKA 120
Y + + F + LA F ++ +LL + + ++F V YG+A+ +++
Sbjct: 71 YHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRANMLDRS 130
Query: 121 VNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVI 180
+ F +E ++ +TVKS N++L + + A Y + K I+P+ T+N +I
Sbjct: 131 IQTFRNLE-QYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMI 189
Query: 181 KALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTF 240
+ LC+ G + + + + P + ++ ++DG KE + DE ++ M G
Sbjct: 190 RVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVH 249
Query: 241 PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSL 300
+N++I LCK+ A L+D + PN VTY+ L+ G C + L++A++L
Sbjct: 250 VGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNL 309
Query: 301 LNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFK 360
MV N P+ + TL+H L K
Sbjct: 310 FEVMVCNGYKPDSECYFTLIH-----------------------------------CLCK 334
Query: 361 EGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK 412
G FE A+ L +E MEK P+ V L++GL K DEA+E + +K K
Sbjct: 335 GGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEK 386
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 163/372 (43%), Gaps = 30/372 (8%)
Query: 136 TVKSFNS-------VLNVIIQEGHFHRALEFYSHVCKSLNIQPN----GLTFNLVIKALC 184
T+KS S L+++ E + R LE +C+S ++ P+ + F++ + L
Sbjct: 31 TLKSLTSKQKKSRDTLSLLKSENNPDRILE----ICRSTSLSPDYHVDRIIFSVAVVTLA 86
Query: 185 KVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGR---IDEAVSL---LDEMQIEG 238
+ ++ G ++N PD + S + + GR +D ++ L++ +I
Sbjct: 87 REKHFVAVSQLLDGF-IQN-QPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPR 144
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKLVDNMS-LKGCVPNEVTYNTLVDGLCRKGKLNKA 297
T + N L+ A D A ++ M + G P+ TYN ++ LC G + +
Sbjct: 145 TVKS---LNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSS 201
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
S++ +M P +FG ++ GF K+ + + V+ ++E G Y+ +I
Sbjct: 202 YSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQC 261
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
L K K A L +M PN+V YS LI G C E DEA M G+ P+
Sbjct: 262 LCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPD 321
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEA---MM 474
S Y +L+ + GD A+++ +E + + L+NGL K+ EA +
Sbjct: 322 SECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIA 381
Query: 475 VWKQMLSRGIKL 486
V K+ +R + L
Sbjct: 382 VVKEKFTRNVDL 393
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 127/288 (44%), Gaps = 8/288 (2%)
Query: 277 NEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRAS---DGA 333
+ + ++ V L R+ LL+ + N+ P +F V + GRA+
Sbjct: 74 DRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFA--VRAIILYGRANMLDRSI 131
Query: 334 SVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEK-GCEPNTVVYSALIDG 392
+LE+ ++L+ ++ A +++ EM + G EP+ Y+ +I
Sbjct: 132 QTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRV 191
Query: 393 LCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHN 452
LC G + + EM+ K P + ++ ++ GF++ + V + M +
Sbjct: 192 LCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVG 251
Query: 453 EVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFN 512
Y+I+I LCK K EA + ++S ++ + V YS +IHGFC+ + +D+ M LF
Sbjct: 252 VATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFE 311
Query: 513 QMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDF 560
M+C +PD Y L++ + + A+ + +++ P F
Sbjct: 312 VMVCN--GYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSF 357
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 151/317 (47%), Gaps = 8/317 (2%)
Query: 102 KNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYS 161
K ++ Y A+ +A+ F M+ +F ++F +L + + GH +A EF
Sbjct: 190 KAMFLMMDRYAAANDTSQAIRTFDIMD-KFKHTPYDEAFQGLLCALCRHGHIEKAEEFML 248
Query: 162 HVCKSLNIQPNGLTFNLVIKALCKVGL-VDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCK 220
K + G FN+++ C + V +A ++R + P+ +YS ++ K
Sbjct: 249 ASKKLFPVDVEG--FNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSK 306
Query: 221 EGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVT 280
G + +++ L DEM+ G P V+N L+ L ++ A KL+ ++ +G P+ VT
Sbjct: 307 VGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVT 366
Query: 281 YNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLE 340
YN+++ LC GKL+ A ++L M++ P TF H F++ VL ++
Sbjct: 367 YNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTF----HAFLEAVNFEKTLEVLGQMK 422
Query: 341 ERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
E + ++ LFK + E+A+++W EM N +Y A I GL G +
Sbjct: 423 ISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLE 482
Query: 401 EAREYLIEMKNKGHLPN 417
+ARE EMK+KG + N
Sbjct: 483 KAREIYSEMKSKGFVGN 499
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 146/304 (48%), Gaps = 10/304 (3%)
Query: 214 LMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKG 273
+MD +A+ D M P F L+ ALC+ G + +A + + ++ K
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM--LASKK 252
Query: 274 CVPNEVT-YNTLVDGLCR-KGKLNKAVSLLNQMVANKCV-PNDVTFGTLVHGFVKQGRAS 330
P +V +N +++G C + +A + +M N C+ PN ++ ++ F K G
Sbjct: 253 LFPVDVEGFNVILNGWCNIWTDVTEAKRIWREM-GNYCITPNKDSYSHMISCFSKVGNLF 311
Query: 331 DGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALI 390
D + +++RG +Y+SL+ L +E F+ AM+L K++ E+G +P++V Y+++I
Sbjct: 312 DSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMI 371
Query: 391 DGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCN 450
LC GK D AR L M ++ P T+ F EA + K + V +MK +
Sbjct: 372 RPLCEAGKLDVARNVLATMISENLSPTVDTF----HAFLEAVNFEKTLEVLGQMKISDLG 427
Query: 451 HNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKL 510
E + +++ L K + A+ +W +M I + Y + I G + +++ ++
Sbjct: 428 PTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREI 487
Query: 511 FNQM 514
+++M
Sbjct: 488 YSEM 491
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 4/191 (2%)
Query: 381 PNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEA-GDCHKAIL 439
P + L+ LCR G ++A E+++ K K + ++ ++ G+ D +A
Sbjct: 222 PYDEAFQGLLCALCRHGHIEKAEEFMLASK-KLFPVDVEGFNVILNGWCNIWTDVTEAKR 280
Query: 440 VWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFC 499
+W+EM N N+ YS +I+ K G L +++ ++ +M RG+ + Y+S+++
Sbjct: 281 IWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLT 340
Query: 500 NAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
D+ MKL ++ E L+PD TYN ++ + + A +VL M+ + P
Sbjct: 341 REDCFDEAMKLMKKL--NEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPT 398
Query: 560 FITCDIFLKTL 570
T FL+ +
Sbjct: 399 VDTFHAFLEAV 409
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 10/235 (4%)
Query: 344 HRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVV-YSALIDGLCR-EGKADE 401
H + + L+ L + G E A + + K P V ++ +++G C E
Sbjct: 220 HTPYDEAFQGLLCALCRHGHIEKAEEF--MLASKKLFPVDVEGFNVILNGWCNIWTDVTE 277
Query: 402 AREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILIN 461
A+ EM N PN +YS ++ F + G+ ++ ++ EMK Y+ L+
Sbjct: 278 AKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVY 337
Query: 462 GLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAEL 521
L + EAM + K++ G+K D V Y+SMI C A +D + M+ + L
Sbjct: 338 VLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISE--NL 395
Query: 522 QPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNP 576
P V T+ +AF + N + ++VL M P T + L L P
Sbjct: 396 SPTVDTF----HAFLEAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQP 446
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 196/466 (42%), Gaps = 12/466 (2%)
Query: 55 GSHKWGSYKLG----DLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKA 110
G W + + G +S++S+ + L+ S F++++ L +Q+K + + + +
Sbjct: 67 GFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDT 126
Query: 111 YGKAHFPEKAVNLFHRMEAEFHCKQTVKS--FNSVLNVIIQEGHFHRALEFYSHVCKSLN 168
KA + F +E F Q + N +L + +G + A + + + +
Sbjct: 127 LV---LGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKM-RHKG 182
Query: 169 IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTL-MDGLCKEGRIDEA 227
+ N L F + I C+ +Q + + + N + + L + LCK R +A
Sbjct: 183 VSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDA 242
Query: 228 VSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDG 287
+L+E++ P+ + V+ A G+L ++ G P Y +
Sbjct: 243 FYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILD 302
Query: 288 LCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGN 347
L +L +A + +V+ K P D + G V L+ + G
Sbjct: 303 LISAKRLTEAKEVAEVIVSGK-FPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPA 361
Query: 348 EYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLI 407
S L L + K +H ++ ++ + KG YS +I LC+ G+ E+ L
Sbjct: 362 IRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQ 421
Query: 408 EMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNG 467
EMK +G P+ Y++L+ +A A +W EM C N Y++LI L + G
Sbjct: 422 EMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEG 481
Query: 468 KLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQ 513
+ E++ ++ +ML RGI+ D Y S+I G C ++ M++F +
Sbjct: 482 EAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRK 527
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/443 (20%), Positives = 178/443 (40%), Gaps = 37/443 (8%)
Query: 152 HFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTY 211
H AL F++ + + ++++ + K+L +F+ + DS Y
Sbjct: 61 HHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVY 120
Query: 212 STLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSL 271
+L+D L + A +L+E G +P V N L++ L G A KL M
Sbjct: 121 RSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRH 180
Query: 272 KGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV-ANKCVPNDVTFGTLVHGFVKQGRAS 330
KG N + + + CR + N+ + L++++ AN + + ++H K R
Sbjct: 181 KGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREM 240
Query: 331 DGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALI 390
D +L L + + Y + G + K+ + G P + Y A I
Sbjct: 241 DAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFI 300
Query: 391 DGLCREGKADEARE----------------------------------YLIEMKNKGHLP 416
L + EA+E +L+ M + G LP
Sbjct: 301 LDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLP 360
Query: 417 NSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVW 476
T S L + I ++ + + YS++I+ LCK G++ E+
Sbjct: 361 AIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTAL 420
Query: 477 KQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFY 536
++M G+ DV Y+++I C A+++ KL+++M + ++ ++ TYN+L+
Sbjct: 421 QEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKM--NLTTYNVLIRKLS 478
Query: 537 QQNNISRAMDVLNIMLDQGCDPD 559
++ ++ + + ML++G +PD
Sbjct: 479 EEGEAEESLRLFDKMLERGIEPD 501
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 4/279 (1%)
Query: 190 DQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVL 249
D AVE + P T S L LC+ + D + + + +G F ++++
Sbjct: 344 DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLM 403
Query: 250 ISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKC 309
IS LCK G + + + M +G P+ YN L++ C+ + A L ++M C
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGC 463
Query: 310 VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
N T+ L+ ++G A + + + ERG +E IY SLI GL KE K E AM+
Sbjct: 464 KMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAME 523
Query: 370 LWKEMMEKGCEPNT-VVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGF 428
++++ ME+ + T V S + LC G + EA + L + + HL ++ + L++
Sbjct: 524 VFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLL---REREHLEHTGAHVVLLKCV 580
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNG 467
+A + I + +K S + S L+ C +
Sbjct: 581 ADAKEVEIGIRHMQWIKEVSPSLVHTISSDLLASFCSSS 619
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 4/220 (1%)
Query: 156 ALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLM 215
A+EF ++ + + P T + + K LC+ D ++ + + + + +YS ++
Sbjct: 346 AVEFLVYMVSTGKL-PAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMI 404
Query: 216 DGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAA-KLVDNMSLKGC 274
LCK GR+ E+ + L EM+ EG P+ ++N LI A C K ++IR A KL D M ++GC
Sbjct: 405 SFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACC-KAEMIRPAKKLWDEMFVEGC 463
Query: 275 VPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGAS 334
N TYN L+ L +G+ +++ L ++M+ P++ + +L+ G K+ +
Sbjct: 464 KMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAME 523
Query: 335 VLISLEERGHRG-NEYIYSSLISGLFKEGKFEHAMQLWKE 373
V ER H+ + S + L G A QL +E
Sbjct: 524 VFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLRE 563
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 200/464 (43%), Gaps = 81/464 (17%)
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRG 198
++ +L I G H L H L +P+ ++ K G + A +VF
Sbjct: 83 TYLKLLESCIDSGSIH--LGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDS 140
Query: 199 IHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGD 258
+ RN +T+S ++ +E R E L M +G P+ F+F ++ GD
Sbjct: 141 MRERNL----FTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGD 196
Query: 259 LIRAAKLVDNMSLK----GC--VPNE--------------------------VTYNTLVD 286
+ A K++ ++ +K C V N + +N+++
Sbjct: 197 -VEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLL 255
Query: 287 GLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRG 346
C+ GK +AV L+ +M P VT+ L+ G+ + G+ ++ +E G
Sbjct: 256 AYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITA 315
Query: 347 NEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTV---------------------- 384
+ + ++++ISGL G A+ ++++M G PN V
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 385 -------------VYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEA 431
V ++L+D + GK ++AR+ +KNK + +T++S++ G+ +A
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQA 431
Query: 432 GDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRG-IKLDVVA 490
G C KA ++ M++ + N + ++ +I+G KNG EAM ++++M G ++ +
Sbjct: 432 GYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTAT 491
Query: 491 YSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNA 534
++ +I G+ D+ ++LF +M Q + P+ T LL A
Sbjct: 492 WNLIIAGYIQNGKKDEALELFRKM--QFSRFMPNSVTILSLLPA 533
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 117/515 (22%), Positives = 218/515 (42%), Gaps = 65/515 (12%)
Query: 119 KAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNL 178
+A + H + + ++ NS+L V + G A +F+ + + + + +N
Sbjct: 198 EAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRM-----RERDVIAWNS 252
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG 238
V+ A C+ G ++AVE+ + + +P T++ L+ G + G+ D A+ L+ +M+ G
Sbjct: 253 VLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFG 312
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTY----------------- 281
+ F + +IS L G +A + M L G VPN VT
Sbjct: 313 ITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGS 372
Query: 282 ------------------NTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGF 323
N+LVD + GKL A + + V NK V T+ +++ G+
Sbjct: 373 EVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDS-VKNKDV---YTWNSMITGY 428
Query: 324 VKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG-CEPN 382
+ G + +++ R N ++++ISG K G AM L++ M + G + N
Sbjct: 429 CQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRN 488
Query: 383 TVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMR------GFFEAGDCHK 436
T ++ +I G + GK DEA E +M+ +PNS T SL+ G + H
Sbjct: 489 TATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHG 548
Query: 437 AILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIH 496
+L +N H + L + K+G + + ++ M ++ D++ ++S+I
Sbjct: 549 CVL----RRNLDAIH--AVKNALTDTYAKSGDIEYSRTIFLGMETK----DIITWNSLIG 598
Query: 497 GFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL-NIMLDQG 555
G+ + LFNQM Q + P+ T + ++ A N+ V +I D
Sbjct: 599 GYVLHGSYGPALALFNQMKTQ--GITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYH 656
Query: 556 CDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVR 590
P C + L N ++ +F+ E+ ++
Sbjct: 657 IIPALEHCSAMV-YLYGRANRLEEALQFIQEMNIQ 690
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 130/300 (43%), Gaps = 15/300 (5%)
Query: 107 IFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKS 166
+ Y +A + KA LF RM+ + + + + ++N++++ I+ G A++ + + K
Sbjct: 424 MITGYCQAGYCGKAYELFTRMQ-DANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKD 482
Query: 167 LNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDG---LCKEGR 223
+Q N T+NL+I + G D+A+E+FR + P+S T +L+ L
Sbjct: 483 GKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKM 542
Query: 224 IDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNT 283
+ E + ++ V N L K GD+ + + M K + +T+N+
Sbjct: 543 VREIHGCVLRRNLDAIHA---VKNALTDTYAKSGDIEYSRTIFLGMETK----DIITWNS 595
Query: 284 LVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERG 343
L+ G G A++L NQM PN T +++ G +G V S+
Sbjct: 596 LIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDY 655
Query: 344 HRGNEYIYSSLISGLF-KEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
H + S + L+ + + E A+Q +EM + T ++ + + G G D A
Sbjct: 656 HIIPALEHCSAMVYLYGRANRLEEALQFIQEM---NIQSETPIWESFLTGCRIHGDIDMA 712
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 140/334 (41%), Gaps = 23/334 (6%)
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAV 298
+FP F+ N A + + N+S + + D LCR G L +A
Sbjct: 8 SFPKTFL-NYQTPAKVENSPELHPKSRKKNLSFTKKKEPNIIPDEQFDYLCRNGSLLEAE 66
Query: 299 SLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGL 358
L+ + T+ L+ + G G +L + + ++ + L+S
Sbjct: 67 KALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLG-RILHARFGLFTEPDVFVETKLLSMY 125
Query: 359 FKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNS 418
K G A +++ M E+ N +SA+I RE + E + M G LP+
Sbjct: 126 AKCGCIADARKVFDSMRER----NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDD 181
Query: 419 FTYSSLMRGFFEAGDCHKAILVWK---EMKNNSCNHNEVCYSILINGLCKNGKLMEAMMV 475
F + +++G GD ++ ++ +SC V SIL K G+L A
Sbjct: 182 FLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLR--VSNSILAV-YAKCGELDFATKF 238
Query: 476 WKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAF 535
+++M R DV+A++S++ +C ++ ++L +M ++ + P + T+NIL+ +
Sbjct: 239 FRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEM--EKEGISPGLVTWNILIGGY 292
Query: 536 YQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKT 569
Q AMD++ M G IT D+F T
Sbjct: 293 NQLGKCDAAMDLMQKMETFG-----ITADVFTWT 321
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 119/538 (22%), Positives = 240/538 (44%), Gaps = 36/538 (6%)
Query: 69 FYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRME 128
F SLI A D ASL + Q+ R R V + + P+ ++++F E
Sbjct: 32 FISLIH---ACKDTASLRHVHAQILR-RGVLSSRVAAQLVSCSSLLKSPDYSLSIFRNSE 87
Query: 129 AEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGL 188
++ N+++ + + F ++ + + + L ++P+ LTF V+K+ K+G
Sbjct: 88 -----ERNPFVLNALIRGLTENARFESSVRHFILMLR-LGVKPDRLTFPFVLKSNSKLGF 141
Query: 189 --VDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
+ +A+ + +C DS+ +L+D K G++ A + +E + ++
Sbjct: 142 RWLGRALHAATLKNFVDC--DSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIW 199
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA 306
NVLI+ C+ D+ A L +M + N +++TL+ G G+LN+A L M
Sbjct: 200 NVLINGYCRAKDMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFELMPE 255
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEH 366
N V++ TL++GF + G S + E+G + NEY ++++S K G
Sbjct: 256 K----NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGS 311
Query: 367 AMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMR 426
+++ +++ G + + + +AL+D + G+ D A M +K + +++++++
Sbjct: 312 GIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK----DILSWTAMIQ 367
Query: 427 GFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKL 486
G+ G H+AI +++M + +EV + ++ + ++ + + M +L
Sbjct: 368 GWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSM-----RL 422
Query: 487 DVVAYSSMIHGFCNAQLVDQGMKLFN-QMLCQEAELQPDVATYNILLNAFYQQNNISRAM 545
D ++ H L+ + KL L + + PD+ T+ L A RA
Sbjct: 423 DYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAE 482
Query: 546 DVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKI 603
V +L+ DP+ IFL + QD + L R+ ++R++G S I
Sbjct: 483 SVSQNLLE--LDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRI--KERSLGWSYI 536
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 154/309 (49%), Gaps = 8/309 (2%)
Query: 246 FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
F +LI+A K G+ A +++ +S G PN ++Y L++ R GK N A ++ +M
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGH---RGNEYIYSSLISGLFKEG 362
++ P+ +T+ ++ FV+ + + V +L + + ++ +Y +I K G
Sbjct: 209 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 268
Query: 363 KFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYS 422
+E A +++ M+ KG +TV Y++L + E E + +M+ P+ +Y+
Sbjct: 269 NYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYA 325
Query: 423 SLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSR 482
L++ + A +A+ V++EM + Y+IL++ +G + +A V+K M
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 385
Query: 483 GIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNIS 542
I D+ +Y++M+ + NA ++ K F ++ E P++ TY L+ + + N++
Sbjct: 386 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE--PNIVTYGTLIKGYAKANDVE 443
Query: 543 RAMDVLNIM 551
+ M+V M
Sbjct: 444 KMMEVYEKM 452
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 161/343 (46%), Gaps = 13/343 (3%)
Query: 151 GHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYT 210
G+F+ A S + K + PN +++ ++++ + G + A +FR + P + T
Sbjct: 160 GNFNGAERVLSVLSK-MGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAIT 218
Query: 211 YSTLMDGLCKEGRIDEAV----SLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV 266
Y ++ + + EA +LLDE + P+ +++++I K G+ +A K+
Sbjct: 219 YQIILKTFVEGDKFKEAEEVFETLLDEKK-SPLKPDQKMYHMMIYMYKKAGNYEKARKVF 277
Query: 267 DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQ 326
+M KG + VTYN+L+ +++K + +QM + P+ V++ L+ + +
Sbjct: 278 SSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRA 334
Query: 327 GRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVY 386
R + SV + + G R Y+ L+ G E A ++K M P+ Y
Sbjct: 335 RREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSY 394
Query: 387 SALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKN 446
+ ++ + A ++ +K G PN TY +L++G+ +A D K + V+++M+
Sbjct: 395 TTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRL 454
Query: 447 NSCNHNEVCYSILIN--GLCKNGKLMEAMMVWKQMLSRGIKLD 487
+ N+ + +++ G CKN A+ +K+M S G+ D
Sbjct: 455 SGIKANQTILTTIMDASGRCKN--FGSALGWYKEMESCGVPPD 495
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 133/278 (47%), Gaps = 14/278 (5%)
Query: 297 AVSLLNQMV--ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGN--EYIYS 352
AV +L Q ++ +P D+ GTLV KQ + + S ++ + N E +
Sbjct: 93 AVPVLRQYKTDGDQGLPRDLVLGTLVR--FKQLKKWNLVSEILEWLRYQNWWNFSEIDFL 150
Query: 353 SLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK 412
LI+ K G F A ++ + + G PN + Y+AL++ R GK + A M++
Sbjct: 151 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 210
Query: 413 GHLPNSFTYSSLMRGFFEAGDCHKAILVWKEM---KNNSCNHNEVCYSILINGLCKNGKL 469
G P++ TY +++ F E +A V++ + K + ++ Y ++I K G
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 470 MEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYN 529
+A V+ M+ +G+ V Y+S++ + + V K+++QM Q +++QPDV +Y
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQM--QRSDIQPDVVSYA 325
Query: 530 ILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
+L+ A+ + A+ V MLD G P +I L
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 363
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/380 (20%), Positives = 161/380 (42%), Gaps = 14/380 (3%)
Query: 99 FIEKNFIVIFKAYGK-AHF--PEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHR 155
F E +F+++ AYGK +F E+ +++ +M V S+ +++ + G +
Sbjct: 144 FSEIDFLMLITAYGKLGNFNGAERVLSVLSKM----GSTPNVISYTALMESYGRGGKCNN 199
Query: 156 ALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGI---HLRNCAPDSYTYS 212
A + + +S +P+ +T+ +++K + +A EVF + PD Y
Sbjct: 200 AEAIFRRM-QSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYH 258
Query: 213 TLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLK 272
++ K G ++A + M +G + +N L+S ++ +K+ D M
Sbjct: 259 MMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEV---SKIYDQMQRS 315
Query: 273 GCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDG 332
P+ V+Y L+ R + +A+S+ +M+ P + L+ F G
Sbjct: 316 DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA 375
Query: 333 ASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDG 392
+V S+ + + Y++++S E A + +K + G EPN V Y LI G
Sbjct: 376 KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG 435
Query: 393 LCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHN 452
+ ++ E +M+ G N +++M + A+ +KEM++ +
Sbjct: 436 YAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPD 495
Query: 453 EVCYSILINGLCKNGKLMEA 472
+ ++L++ +L EA
Sbjct: 496 QKAKNVLLSLASTQDELEEA 515
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 116/259 (44%), Gaps = 8/259 (3%)
Query: 312 NDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLW 371
+++ F L+ + K G + VL L + G N Y++L+ + GK +A ++
Sbjct: 145 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 204
Query: 372 KEMMEKGCEPNTVVYSALIDGLCREGK---ADEAREYLIEMKNKGHLPNSFTYSSLMRGF 428
+ M G EP+ + Y ++ K A+E E L++ K P+ Y ++ +
Sbjct: 205 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 264
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
+AG+ KA V+ M + V Y+ L + E ++ QM I+ DV
Sbjct: 265 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDV 321
Query: 489 VAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL 548
V+Y+ +I + A+ ++ + +F +ML +A ++P YNILL+AF + +A V
Sbjct: 322 VSYALLIKAYGRARREEEALSVFEEML--DAGVRPTHKAYNILLDAFAISGMVEQAKTVF 379
Query: 549 NIMLDQGCDPDFITCDIFL 567
M PD + L
Sbjct: 380 KSMRRDRIFPDLWSYTTML 398
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/377 (18%), Positives = 152/377 (40%), Gaps = 35/377 (9%)
Query: 62 YKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAV 121
+ ++ F LI +F E +L + + ++ + ++YG+ A
Sbjct: 142 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 201
Query: 122 NLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVC--KSLNIQPNGLTFNLV 179
+F RM++ + + ++ +L ++ F A E + + K ++P+ ++++
Sbjct: 202 AIFRRMQSS-GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMM 260
Query: 180 IKALCKVGLVDQAVEVF-----RGI---------------------------HLRNCAPD 207
I K G ++A +VF +G+ + PD
Sbjct: 261 IYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPD 320
Query: 208 SYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVD 267
+Y+ L+ + R +EA+S+ +EM G P +N+L+ A G + +A +
Sbjct: 321 VVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFK 380
Query: 268 NMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQG 327
+M P+ +Y T++ + A ++ + PN VT+GTL+ G+ K
Sbjct: 381 SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAN 440
Query: 328 RASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYS 387
V + G + N+ I ++++ + F A+ +KEM G P+ +
Sbjct: 441 DVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKN 500
Query: 388 ALIDGLCREGKADEARE 404
L+ + + +EA+E
Sbjct: 501 VLLSLASTQDELEEAKE 517
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 156/309 (50%), Gaps = 8/309 (2%)
Query: 246 FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
F +LI+A K G+ A +++ +S G PN ++Y L++ R GK N A ++ +M
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISL-EERGH--RGNEYIYSSLISGLFKEG 362
++ P+ +T+ ++ FV+ + + V +L +E+ + ++ +Y +I K G
Sbjct: 202 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 261
Query: 363 KFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYS 422
+E A +++ M+ KG +TV Y++L + E E + +M+ P+ +Y+
Sbjct: 262 NYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYA 318
Query: 423 SLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSR 482
L++ + A +A+ V++EM + Y+IL++ +G + +A V+K M
Sbjct: 319 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 378
Query: 483 GIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNIS 542
I D+ +Y++M+ + NA ++ K F ++ E P++ TY L+ + + N++
Sbjct: 379 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE--PNIVTYGTLIKGYAKANDVE 436
Query: 543 RAMDVLNIM 551
+ M+V M
Sbjct: 437 KMMEVYEKM 445
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 161/343 (46%), Gaps = 13/343 (3%)
Query: 151 GHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYT 210
G+F+ A S + K + PN +++ ++++ + G + A +FR + P + T
Sbjct: 153 GNFNGAERVLSVLSK-MGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAIT 211
Query: 211 YSTLMDGLCKEGRIDEAV----SLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV 266
Y ++ + + EA +LLDE + P+ +++++I K G+ +A K+
Sbjct: 212 YQIILKTFVEGDKFKEAEEVFETLLDEKK-SPLKPDQKMYHMMIYMYKKAGNYEKARKVF 270
Query: 267 DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQ 326
+M KG + VTYN+L+ +++K + +QM + P+ V++ L+ + +
Sbjct: 271 SSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRA 327
Query: 327 GRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVY 386
R + SV + + G R Y+ L+ G E A ++K M P+ Y
Sbjct: 328 RREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSY 387
Query: 387 SALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKN 446
+ ++ + A ++ +K G PN TY +L++G+ +A D K + V+++M+
Sbjct: 388 TTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRL 447
Query: 447 NSCNHNEVCYSILIN--GLCKNGKLMEAMMVWKQMLSRGIKLD 487
+ N+ + +++ G CKN A+ +K+M S G+ D
Sbjct: 448 SGIKANQTILTTIMDASGRCKN--FGSALGWYKEMESCGVPPD 488
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 133/278 (47%), Gaps = 14/278 (5%)
Query: 297 AVSLLNQMV--ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGN--EYIYS 352
AV +L Q ++ +P D+ GTLV KQ + + S ++ + N E +
Sbjct: 86 AVPVLRQYKTDGDQGLPRDLVLGTLVR--FKQLKKWNLVSEILEWLRYQNWWNFSEIDFL 143
Query: 353 SLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK 412
LI+ K G F A ++ + + G PN + Y+AL++ R GK + A M++
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203
Query: 413 GHLPNSFTYSSLMRGFFEAGDCHKAILVWKEM---KNNSCNHNEVCYSILINGLCKNGKL 469
G P++ TY +++ F E +A V++ + K + ++ Y ++I K G
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 470 MEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYN 529
+A V+ M+ +G+ V Y+S++ + + V K+++QM Q +++QPDV +Y
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQM--QRSDIQPDVVSYA 318
Query: 530 ILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
+L+ A+ + A+ V MLD G P +I L
Sbjct: 319 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 356
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/380 (20%), Positives = 161/380 (42%), Gaps = 14/380 (3%)
Query: 99 FIEKNFIVIFKAYGK-AHF--PEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHR 155
F E +F+++ AYGK +F E+ +++ +M V S+ +++ + G +
Sbjct: 137 FSEIDFLMLITAYGKLGNFNGAERVLSVLSKM----GSTPNVISYTALMESYGRGGKCNN 192
Query: 156 ALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGI---HLRNCAPDSYTYS 212
A + + +S +P+ +T+ +++K + +A EVF + PD Y
Sbjct: 193 AEAIFRRM-QSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYH 251
Query: 213 TLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLK 272
++ K G ++A + M +G + +N L+S ++ +K+ D M
Sbjct: 252 MMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEV---SKIYDQMQRS 308
Query: 273 GCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDG 332
P+ V+Y L+ R + +A+S+ +M+ P + L+ F G
Sbjct: 309 DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA 368
Query: 333 ASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDG 392
+V S+ + + Y++++S E A + +K + G EPN V Y LI G
Sbjct: 369 KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG 428
Query: 393 LCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHN 452
+ ++ E +M+ G N +++M + A+ +KEM++ +
Sbjct: 429 YAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPD 488
Query: 453 EVCYSILINGLCKNGKLMEA 472
+ ++L++ +L EA
Sbjct: 489 QKAKNVLLSLASTQDELEEA 508
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 116/259 (44%), Gaps = 8/259 (3%)
Query: 312 NDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLW 371
+++ F L+ + K G + VL L + G N Y++L+ + GK +A ++
Sbjct: 138 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 197
Query: 372 KEMMEKGCEPNTVVYSALIDGLCREGK---ADEAREYLIEMKNKGHLPNSFTYSSLMRGF 428
+ M G EP+ + Y ++ K A+E E L++ K P+ Y ++ +
Sbjct: 198 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 257
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
+AG+ KA V+ M + V Y+ L + E ++ QM I+ DV
Sbjct: 258 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDV 314
Query: 489 VAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL 548
V+Y+ +I + A+ ++ + +F +ML +A ++P YNILL+AF + +A V
Sbjct: 315 VSYALLIKAYGRARREEEALSVFEEML--DAGVRPTHKAYNILLDAFAISGMVEQAKTVF 372
Query: 549 NIMLDQGCDPDFITCDIFL 567
M PD + L
Sbjct: 373 KSMRRDRIFPDLWSYTTML 391
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/377 (18%), Positives = 152/377 (40%), Gaps = 35/377 (9%)
Query: 62 YKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAV 121
+ ++ F LI +F E +L + + ++ + ++YG+ A
Sbjct: 135 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 194
Query: 122 NLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVC--KSLNIQPNGLTFNLV 179
+F RM++ + + ++ +L ++ F A E + + K ++P+ ++++
Sbjct: 195 AIFRRMQSS-GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMM 253
Query: 180 IKALCKVGLVDQAVEVF-----RGI---------------------------HLRNCAPD 207
I K G ++A +VF +G+ + PD
Sbjct: 254 IYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPD 313
Query: 208 SYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVD 267
+Y+ L+ + R +EA+S+ +EM G P +N+L+ A G + +A +
Sbjct: 314 VVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFK 373
Query: 268 NMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQG 327
+M P+ +Y T++ + A ++ + PN VT+GTL+ G+ K
Sbjct: 374 SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAN 433
Query: 328 RASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYS 387
V + G + N+ I ++++ + F A+ +KEM G P+ +
Sbjct: 434 DVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKN 493
Query: 388 ALIDGLCREGKADEARE 404
L+ + + +EA+E
Sbjct: 494 VLLSLASTQDELEEAKE 510
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 116/515 (22%), Positives = 212/515 (41%), Gaps = 25/515 (4%)
Query: 140 FNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGI 199
++ +LN +++E F + + S+ +T ++++K CK G +D+A + R +
Sbjct: 220 YHVLLNALVEEKCFDSFDVIFDQI--SVRGFVCAVTHSILVKKFCKQGKLDEAEDYLRAL 277
Query: 200 HLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDL 259
+ A L+D LC + + EA LLDE+++ GT +N+ I AL K G L
Sbjct: 278 LPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFL 337
Query: 260 IRAAKLVDNMS-LKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
A + +S L+GC YN++V L ++ L+ +L +M+ PN T
Sbjct: 338 NNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNA 397
Query: 319 LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG 378
+ F K G + + S E G Y+ LI L E A + K +++G
Sbjct: 398 ALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRG 457
Query: 379 CEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAI 438
+S L + LC +GK D ARE +I + LP ++ + G A+
Sbjct: 458 HFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDAL 517
Query: 439 LVWKEMKNNSCNHNEVCYSILING--LCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIH 496
++ + + + + ++ LI G G + +++ +M +G Y ++I
Sbjct: 518 MINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLII--RMQEKGYTPTRSLYRNVIQ 575
Query: 497 GFCNAQLVDQGMKLFNQMLC--QEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQ 554
C ++ G K F L Q + + V YN+ + A V ++M
Sbjct: 576 CVCE---MESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRD 632
Query: 555 GCDPDFITCDIFLKT------LRDNMNPPQDGRE-------FLDELVVRLVKRQRTIGAS 601
G P + + L++ + D ++ D RE ++V L K + A
Sbjct: 633 GITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRLYQVMIVGLCKANKLDDAM 692
Query: 602 KIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAI 636
+E M L P + + +Q+LC +A+
Sbjct: 693 HFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAV 727
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 191/466 (40%), Gaps = 16/466 (3%)
Query: 175 TFNLVIKALCKVGLVDQAVEVFRGIH-LRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDE 233
+N+ I+AL K G ++ + + I L C + + Y++++ L KE +D +L E
Sbjct: 323 AYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTE 382
Query: 234 MQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGK 293
M + G PN N + CK G + A +L + S G P ++YN L+ LC
Sbjct: 383 MMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANES 442
Query: 294 LNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSS 353
+ +A +L + TF TL + +G+ ++I+ ER
Sbjct: 443 VEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCK 502
Query: 354 LISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKG 413
+IS L GK E A+ + + + G + + ++++LI G + D A + +I M+ KG
Sbjct: 503 IISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKG 562
Query: 414 HLPNSFTYSSLMRGFFEAGDCHKAIL-VWKEMKNNSCNHNEVCYSILINGLCKNGKLMEA 472
+ P Y ++++ E K + + + H Y++ I G GK A
Sbjct: 563 YTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLA 622
Query: 473 MMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILL 532
+V+ M GI V + M+ + + + + F+ + Q + Y +++
Sbjct: 623 RLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQG---KTKKRLYQVMI 679
Query: 533 NAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLV 592
+ N + AM L M +G P ++ ++ L + E DE V LV
Sbjct: 680 VGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNE--------EKYDE-AVGLV 730
Query: 593 KRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAISE 638
R G + I + LL A V + + RNI I E
Sbjct: 731 NEFRKSG--RRITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDKIPE 774
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 168/414 (40%), Gaps = 6/414 (1%)
Query: 138 KSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFR 197
+++N + +I+ G + +F + + +N ++ L K +D ++
Sbjct: 322 RAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILT 381
Query: 198 GIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKG 257
+ +R +P+ T + + CK G +DEA+ L G P +N LI LC
Sbjct: 382 EMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANE 441
Query: 258 DLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFG 317
+ +A ++ +G T++TL + LC KGK + A L+ +P +
Sbjct: 442 SVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGC 501
Query: 318 TLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEK 377
++ G+ D + + G + +++SLI G + + A +L M EK
Sbjct: 502 KIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEK 561
Query: 378 GCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL--PNSFTYSSLMRGFFEAGDCH 435
G P +Y +I +C E ++ E + +K + L Y+ + G AG
Sbjct: 562 GYTPTRSLYRNVIQCVC-EMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPK 620
Query: 436 KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
A LV+ M + +++ KN K+ +A+ + + +G K Y MI
Sbjct: 621 LARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQG-KTKKRLYQVMI 679
Query: 496 HGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLN 549
G C A +D M +M + LQP + Y + + + A+ ++N
Sbjct: 680 VGLCKANKLDDAMHFLEEM--KGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVN 731
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 7/175 (4%)
Query: 176 FNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQ 235
+ ++I LCK +D A+ + P Y + LC E + DEAV L++E +
Sbjct: 675 YQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFR 734
Query: 236 IEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLN 295
G F+ NVL+ K + A + N+ K +P + L+ GL G+++
Sbjct: 735 KSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDK--IPEMKSLGELI-GLF-SGRID 790
Query: 296 KAVSL--LNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNE 348
V L L++++ KC P D+ ++ + +A D ++ + RG+ NE
Sbjct: 791 MEVELKRLDEVI-EKCYPLDMYTYNMLLRMIVMNQAEDAYEMVERIARRGYVPNE 844
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 173/383 (45%), Gaps = 2/383 (0%)
Query: 138 KSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFR 197
K+ L+ I+E + AL+ ++ + K +P T+ + K L DQA +F
Sbjct: 109 KAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFE 168
Query: 198 GIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQ-IEGTFPNPFVFNVLISALCKK 256
+ P Y++L+ K +D+A S L+ M+ + P+ F F VLIS CK
Sbjct: 169 VMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKL 228
Query: 257 GDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVAN-KCVPNDVT 315
G +V MS G + VTYNT++DG + G + S+L M+ + +P+ T
Sbjct: 229 GRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCT 288
Query: 316 FGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM 375
+++ + S + G + + ++ LI K G ++ + M
Sbjct: 289 LNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFME 348
Query: 376 EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCH 435
++ TV Y+ +I+ + G+ ++ + +MK +G PNS TY SL+ + +AG
Sbjct: 349 KRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVV 408
Query: 436 KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
K V +++ N+ + ++ +IN + G L ++ QM R K D + +++MI
Sbjct: 409 KIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMI 468
Query: 496 HGFCNAQLVDQGMKLFNQMLCQE 518
+ + D +L QM+ +
Sbjct: 469 KTYTAHGIFDAVQELEKQMISSD 491
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 182/402 (45%), Gaps = 23/402 (5%)
Query: 181 KALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTL--------MDGLCKEGRIDEAVSLLD 232
K L ++ D AV +GI + +S Y TL +D KE R A+ + +
Sbjct: 79 KELSRILRTDAAV---KGIERK---ANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFN 132
Query: 233 EMQIEGTF-PNPFVFNVLISAL--CKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
++ + + P + L L CK+ D +A+ L + M +G P Y +L+
Sbjct: 133 LLRKQHWYEPRCKTYTKLFKVLGNCKQPD--QASLLFEVMLSEGLKPTIDVYTSLISVYG 190
Query: 290 RKGKLNKAVSLLNQMVA-NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNE 348
+ L+KA S L M + + C P+ TF L+ K GR S+++ + G +
Sbjct: 191 KSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCST 250
Query: 349 YIYSSLISGLFKEGKFEHAMQLWKEMMEKGCE-PNTVVYSALIDGLCREGKADEAREYLI 407
Y+++I G K G FE + +M+E G P+ +++I + +
Sbjct: 251 VTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYS 310
Query: 408 EMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNG 467
+ G P+ T++ L+ F +AG K V M+ + V Y+I+I K G
Sbjct: 311 RFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAG 370
Query: 468 KLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVAT 527
++ + V+++M +G+K + + Y S+++ + A LV + + Q++ + L D
Sbjct: 371 RIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVL--DTPF 428
Query: 528 YNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKT 569
+N ++NA+ Q +++ ++ M ++ C PD IT +KT
Sbjct: 429 FNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKT 470
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 102/222 (45%), Gaps = 1/222 (0%)
Query: 106 VIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCK 165
I YGKA E+ ++ M + V + NS++ G R +E + +
Sbjct: 255 TIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSY-GNGRNMRKMESWYSRFQ 313
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
+ +QP+ TFN++I + K G+ + V + R + + TY+ +++ K GRI+
Sbjct: 314 LMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIE 373
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
+ + +M+ +G PN + L++A K G +++ ++ + V + +N ++
Sbjct: 374 KMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCII 433
Query: 286 DGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQG 327
+ + G L L QM KC P+ +TF T++ + G
Sbjct: 434 NAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHG 475
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 152/347 (43%), Gaps = 39/347 (11%)
Query: 145 NVIIQEGHFHRALEFYSHVCKSL---NIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHL 201
NV ++ F R + + + ++ + +T++ +I + L ++A+E F ++
Sbjct: 190 NVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYK 249
Query: 202 RNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIR 261
PD TYS ++D K G+++E +SL + G P+ F+VL + GD
Sbjct: 250 TGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDG 309
Query: 262 AAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVH 321
++ M PN V YNTL++ + R GK A SL N+M+ PN+ T LV
Sbjct: 310 IRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVK 369
Query: 322 GFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEP 381
+ K A D A+QLW+EM K
Sbjct: 370 IYGKARWARD-----------------------------------ALQLWEEMKAKKWPM 394
Query: 382 NTVVYSALIDGLCREGKADEAREYLIEMKNKGH-LPNSFTYSSLMRGFFEAGDCHKAILV 440
+ ++Y+ L++ G +EA +MK P++F+Y++++ + G KA+ +
Sbjct: 395 DFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMEL 454
Query: 441 WKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLD 487
++EM N + + L+ L K ++ + + V+ + RG+K D
Sbjct: 455 FEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 162/341 (47%), Gaps = 20/341 (5%)
Query: 240 FPNPFVF-NVLISALCKKGDLIRAAKLVDNMSLK----GCVPNEVTYNTLVDGLCRKGKL 294
FP +F NV + +L R +L++ M+L+ G + +TY+T++ R
Sbjct: 182 FPMETIFYNVTMKSL----RFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLY 237
Query: 295 NKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER----GHRGNEYI 350
NKA+ +M +P++VT+ ++ + K G+ + ++SL ER G + +
Sbjct: 238 NKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEE----VLSLYERAVATGWKPDAIA 293
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
+S L + G ++ + +EM +PN VVY+ L++ + R GK AR EM
Sbjct: 294 FSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEML 353
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
G PN T ++L++ + +A A+ +W+EMK + + Y+ L+N G
Sbjct: 354 EAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEE 413
Query: 471 EAMMVWKQML-SRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYN 529
EA ++ M S + D +Y++M++ + + ++ M+LF +ML +A +Q +V
Sbjct: 414 EAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEML--KAGVQVNVMGCT 471
Query: 530 ILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
L+ + I + V ++ + +G PD C L +
Sbjct: 472 CLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVM 512
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 120/272 (44%), Gaps = 5/272 (1%)
Query: 87 ELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNV 146
E ++M + + E + I Y K+ E+ ++L+ R A K +F SVL
Sbjct: 242 EWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVAT-GWKPDAIAF-SVLGK 299
Query: 147 IIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAP 206
+ E + + + KS++++PN + +N +++A+ + G A +F + P
Sbjct: 300 MFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTP 359
Query: 207 DSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFV-FNVLISALCKKGDLIRAAKL 265
+ T + L+ K +A+ L +EM+ + +P F+ +N L++ G A +L
Sbjct: 360 NEKTLTALVKIYGKARWARDALQLWEEMKAK-KWPMDFILYNTLLNMCADIGLEEEAERL 418
Query: 266 VDNMSLK-GCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFV 324
++M C P+ +Y +++ GK KA+ L +M+ N + LV
Sbjct: 419 FNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLG 478
Query: 325 KQGRASDGASVLISLEERGHRGNEYIYSSLIS 356
K R D V +RG + ++ + L+S
Sbjct: 479 KAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLS 510
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 114/214 (53%), Gaps = 13/214 (6%)
Query: 195 VFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALC 254
+F+ + N D+ Y+ ++ GLCK G+ DEA ++ + I G P+ +N++I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 255 KKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDV 314
+ L RA KL M +G VP+ +TYN+++ GLC++ KL +A + V+ C
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA-----RKVSKSCS---- 107
Query: 315 TFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEM 374
TF TL++G+ K R DG ++ + RG N Y++LI G + G F A+ +++EM
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 375 MEKGCEPNTVVYSALIDGLCREGKADEAREYLIE 408
+ G +++ + ++ LC + +A L++
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQ 201
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 105/209 (50%), Gaps = 16/209 (7%)
Query: 281 YNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLE 340
YN ++ GLC+ GK ++A ++ ++ + P+ T+ ++ F GRA + +I
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGRAEKLYAEMI--- 72
Query: 341 ERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
RG + Y+S+I GL K+ K A ++ K C ++ LI+G C+ +
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKV-----SKSCS----TFNTLINGYCKATRVK 123
Query: 401 EAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILI 460
+ EM +G + N TY++L+ GF + GD + A+ +++EM +N + + + ++
Sbjct: 124 DGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDIL 183
Query: 461 NGLCKNGKLMEAMMVWKQ---MLSRGIKL 486
LC +L +A+ + Q M+S + L
Sbjct: 184 PQLCSRKELRKAVAMLLQKSSMVSNNVTL 212
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF 429
++K M E + +T Y+ +I GLC+ GK DEA + G P+ TY+ ++R F
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FS 59
Query: 430 EAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVV 489
G K ++ EM + + Y+ +I+GLCK KL +A R +
Sbjct: 60 SLGRAEK---LYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCS 107
Query: 490 AYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLN 549
++++I+G+C A V GM LF +M + +V TY L++ F Q + + A+D+
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMY--RRGIVANVITYTTLIHGFRQVGDFNTALDIFQ 165
Query: 550 IMLDQGCDPDFIT 562
M+ G IT
Sbjct: 166 EMVSNGVYSSSIT 178
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 86/165 (52%), Gaps = 13/165 (7%)
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
Y+ +I GL K GKF+ A ++ ++ G +P+ Y+ +I R A + EM
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMI 72
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
+G +P++ TY+S++ G C + L + SC+ ++ LING CK ++
Sbjct: 73 RRGLVPDTITYNSMIHGL-----CKQNKLAQARKVSKSCS----TFNTLINGYCKATRVK 123
Query: 471 EAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
+ M ++ +M RGI +V+ Y+++IHGF + + +F +M+
Sbjct: 124 DGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMV 168
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 12/172 (6%)
Query: 145 NVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNC 204
N++I+ RA + Y+ + + + P+ +T+N +I LCK + QA R
Sbjct: 53 NMMIRFSSLGRAEKLYAEMIRR-GLVPDTITYNSMIHGLCKQNKLAQA---------RKV 102
Query: 205 APDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAK 264
+ T++TL++G CK R+ + ++L EM G N + LI + GD A
Sbjct: 103 SKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALD 162
Query: 265 LVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTF 316
+ M G + +T+ ++ LC + +L KAV++L Q + V N+VT
Sbjct: 163 IFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQ--KSSMVSNNVTL 212
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 31/213 (14%)
Query: 440 VWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFC 499
++K M+ ++ + + Y+I+I+GLCK GK EA ++ +L G++ DV Y+ MI F
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FS 59
Query: 500 NAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
+ + + KL+ +M+ L PD TYN +++ +QN +++A V + C
Sbjct: 60 S---LGRAEKLYAEMI--RRGLVPDTITYNSMIHGLCKQNKLAQARKV-----SKSCSTF 109
Query: 560 FITCDIFLKTLRDNMNPPQDGREFLDELVVR-----------LVKRQRTIG----ASKII 604
+ + K R +DG E+ R L+ R +G A I
Sbjct: 110 NTLINGYCKATR-----VKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIF 164
Query: 605 EVMLDRCLLPEASTWAIVVQQLCKPRNIRKAIS 637
+ M+ + + T+ ++ QLC + +RKA++
Sbjct: 165 QEMVSNGVYSSSITFRDILPQLCSRKELRKAVA 197
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 199/415 (47%), Gaps = 45/415 (10%)
Query: 153 FHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYS 212
F+ YS + QP L I LCKVG + +A ++F G+ R D T++
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEWL-----IGELCKVGKIAEARKLFDGLPER----DVVTWT 81
Query: 213 TLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLK 272
++ G K G + EA L D + + N + ++S + L A L M +
Sbjct: 82 HVITGYIKLGDMREARELFDRVD---SRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER 138
Query: 273 GCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDG 332
N V++NT++DG + G+++KA+ L ++M N V++ ++V V++GR +
Sbjct: 139 ----NVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEA 190
Query: 333 ASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDG 392
++L ER R + +++++ GL K GK + A +L+ M E+ N + ++A+I G
Sbjct: 191 ----MNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITG 242
Query: 393 LCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHN 452
+ + DEA + M + ++++++ GF + +KA ++ M N
Sbjct: 243 YAQNNRIDEADQLFQVMPERDFA----SWNTMITGFIRNREMNKACGLFDRMPEK----N 294
Query: 453 EVCYSILINGLCKNGKLMEAMMVWKQMLSRG-IKLDVVAYSSMIHGFCNAQLVDQGMKLF 511
+ ++ +I G +N + EA+ V+ +ML G +K +V Y S++ + + +G ++
Sbjct: 295 VISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQI- 353
Query: 512 NQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQG--CDPDFITCD 564
+Q++ + + ++ T + LLN + + + A M D G C D I+ +
Sbjct: 354 HQLISKSVHQKNEIVT-SALLNMYSKSGELIAARK----MFDNGLVCQRDLISWN 403
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 175/348 (50%), Gaps = 35/348 (10%)
Query: 190 DQAVEVF---RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVF 246
D++V++F R I+ + P L+ LCK G+I EA L D + + +
Sbjct: 25 DRSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTW 80
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA 306
+I+ K GD+ A +L D + + N VT+ +V G R +L+ A L +M
Sbjct: 81 THVITGYIKLGDMREARELFDRVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPE 137
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEH 366
N V++ T++ G+ + GR + + ER N ++S++ L + G+ +
Sbjct: 138 R----NVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDE 189
Query: 367 AMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMR 426
AM L++ M + + V ++A++DGL + GK DEAR M + N ++++++
Sbjct: 190 AMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMIT 241
Query: 427 GFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKL 486
G+ + +A +++ M + ++ +I G +N ++ +A ++ +M +
Sbjct: 242 GYAQNNRIDEADQLFQVMP----ERDFASWNTMITGFIRNREMNKACGLFDRMPEK---- 293
Query: 487 DVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNA 534
+V+++++MI G+ + ++ + +F++ML ++ ++P+V TY +L+A
Sbjct: 294 NVISWTTMITGYVENKENEEALNVFSKML-RDGSVKPNVGTYVSILSA 340
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/497 (21%), Positives = 204/497 (41%), Gaps = 109/497 (21%)
Query: 134 KQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAV 193
++ V ++ V+ I+ G A E + V N+ +T+ ++ + + A
Sbjct: 74 ERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNV----VTWTAMVSGYLRSKQLSIAE 129
Query: 194 EVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISAL 253
+F+ + RN +++T++DG + GRID+A+ L DEM N +N ++ AL
Sbjct: 130 MLFQEMPERNVV----SWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKAL 181
Query: 254 CKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVP-- 311
++G + A L + M + V ++ +VDGL + GK+++A L + C+P
Sbjct: 182 VQRGRIDEAMNLFERMPRRDVV----SWTAMVDGLAKNGKVDEARRLFD------CMPER 231
Query: 312 NDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLW 371
N +++ ++ G+ + R + + + ER ++++I+G + + A L+
Sbjct: 232 NIISWNAMITGYAQNNRIDEADQLFQVMPERDFAS----WNTMITGFIRNREMNKACGLF 287
Query: 372 KEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL-PNSFTYSSLMR---- 426
M EK N + ++ +I G + +EA +M G + PN TY S++
Sbjct: 288 DRMPEK----NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSD 343
Query: 427 --GFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM-------------- 470
G E H+ I + NE+ S L+N K+G+L+
Sbjct: 344 LAGLVEGQQIHQLI------SKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQR 397
Query: 471 -------------------EAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLF 511
EA+ ++ QM G K V Y +++ +A LV++GM+ F
Sbjct: 398 DLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFF 457
Query: 512 NQM------------------LCQEAELQPDVAT-------------YNILLNAFYQQNN 540
+ LC A DV Y +L+A N
Sbjct: 458 KDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNE 517
Query: 541 ISRAMDVLNIMLDQGCD 557
+S A +V+ +L+ G D
Sbjct: 518 VSIAKEVVKKVLETGSD 534
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 101/494 (20%), Positives = 196/494 (39%), Gaps = 132/494 (26%)
Query: 97 RVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRA 156
RV KN +V + A + K +++ + E + V S+N++++ Q G +A
Sbjct: 102 RVDSRKN-VVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVV-SWNTMIDGYAQSGRIDKA 159
Query: 157 LEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMD 216
LE + + + N +++N ++KAL + G +D+A+ +F + R D +++ ++D
Sbjct: 160 LELFDEMP-----ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVD 210
Query: 217 GLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVP 276
GL K G++DEA L D M N +N +I+ + + A +L M +
Sbjct: 211 GLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNNRIDEADQLFQVMPER---- 262
Query: 277 NEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVL 336
+ ++NT++ G R ++NKA L ++M N +++ T++ G+V+ + +V
Sbjct: 263 DFASWNTMITGFIRNREMNKACGLFDRMPEK----NVISWTTMITGYVENKENEEALNVF 318
Query: 337 ISLEERG------------------------------------HRGNEYIYSSLISGLFK 360
+ G H+ NE + S+L++ K
Sbjct: 319 SKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSK 378
Query: 361 EGKFEHAMQLWKEMMEKG--CEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNS 418
G+ A ++M + G C+ + + ++++I G EA E +M+ G P++
Sbjct: 379 SGELIAA----RKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSA 434
Query: 419 FTYSSLMRGFFEAGDCHKAILVWKEMKNN------------------------------- 447
TY +L+ AG K + +K++ +
Sbjct: 435 VTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFIN 494
Query: 448 ----------------SCN-HNEV-------------------CYSILINGLCKNGKLME 471
+CN HNEV Y ++ N NGK E
Sbjct: 495 CDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREE 554
Query: 472 AMMVWKQMLSRGIK 485
A + +M +G+K
Sbjct: 555 AAEMRMKMKEKGLK 568
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 152/352 (43%), Gaps = 24/352 (6%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
+S+ ++I A ++ ++L Q M R F N ++ + + KA LF R
Sbjct: 234 ISWNAMITGYAQNNRIDEADQLFQVMPE--RDFASWNTMIT--GFIRNREMNKACGLFDR 289
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKV 186
M ++ V S+ +++ ++ AL +S + + +++PN T+ ++ A +
Sbjct: 290 MP-----EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDL 344
Query: 187 -GLVD-QAVE--VFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPN 242
GLV+ Q + + + +H +N S L++ K G + A + D + +
Sbjct: 345 AGLVEGQQIHQLISKSVHQKN----EIVTSALLNMYSKSGELIAARKMFDNGLV--CQRD 398
Query: 243 PFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLN 302
+N +I+ G A ++ + M G P+ VTY L+ G + K +
Sbjct: 399 LISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFK 458
Query: 303 QMVANKCVP-NDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKE 361
+V ++ +P + + LV + GR D + + + R R Y +++S
Sbjct: 459 DLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRS---FYGAILSACNVH 515
Query: 362 GKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKG 413
+ A ++ K+++E G + + Y + + GK +EA E ++MK KG
Sbjct: 516 NEVSIAKEVVKKVLETGSD-DAGTYVLMSNIYAANGKREEAAEMRMKMKEKG 566
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 141/287 (49%), Gaps = 7/287 (2%)
Query: 51 IFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKA 110
I+KS S+ S + +++LA S F+ +E L++ K ++ E + ++
Sbjct: 52 IYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRS 111
Query: 111 YGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLN-I 169
YG+A + A+ +F M+ + +TV SFN++L + F R + + + N I
Sbjct: 112 YGRASMFDHAMKMFEEMD-KLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNI 170
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVS 229
P+ +++ ++IK+ C G ++A+E+ R + ++ ++T++ L K G +DEA S
Sbjct: 171 TPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAES 230
Query: 230 LLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
L EM +G + V+NV + K+ R +L++ MS G P+ V+YN L+ C
Sbjct: 231 LWIEMVNKGCDLDNTVYNVRLMNAAKESPE-RVKELMEEMSSVGLKPDTVSYNYLMTAYC 289
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVL 336
KG +++A + + PN TF TL+ G G +V
Sbjct: 290 VKGMMSEAKKVYEGLEQ----PNAATFRTLIFHLCINGLYDQGLTVF 332
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 140/331 (42%), Gaps = 9/331 (2%)
Query: 152 HFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTY 211
F R + + P +T + L KV D+A+ +++ + + +P S Y
Sbjct: 9 RFLRRFSTATGIDSQTTAYPGAITMSKAKSKLRKVQDPDKALAIYKSVSNNSTSPLSSRY 68
Query: 212 ST--LMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNM 269
+ + L K R + +L++ + + LI + + A K+ + M
Sbjct: 69 AMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEM 128
Query: 270 SLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA--NKCVPNDVTFGTLVHGFVKQG 327
G V++N L+ + L ++ N P+ +++G L+ + G
Sbjct: 129 DKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSG 188
Query: 328 RASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYS 387
+ ++ +E +G +++++ L+K G + A LW EM+ KGC+ + VY+
Sbjct: 189 KPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYN 248
Query: 388 ALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNN 447
+ +E + +E + EM + G P++ +Y+ LM + G +A V++ ++
Sbjct: 249 VRLMNAAKES-PERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLE-- 305
Query: 448 SCNHNEVCYSILINGLCKNGKLMEAMMVWKQ 478
N + LI LC NG + + V+K+
Sbjct: 306 --QPNAATFRTLIFHLCINGLYDQGLTVFKK 334
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 148/355 (41%), Gaps = 44/355 (12%)
Query: 276 PNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT--LVHGFVKQGRASDGA 333
P +T + L + +KA+++ + N P + V K R SD
Sbjct: 28 PGAITMSKAKSKLRKVQDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIE 87
Query: 334 SVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGL 393
+++ S + E S+LI + F+HAM++++EM + G V ++AL+
Sbjct: 88 ALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAAC 147
Query: 394 CREGKADEAREYLIEMKNKGH--LPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNH 451
+ + E + + P+ +Y L++ + ++G KA+ + ++M+
Sbjct: 148 LHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEV 207
Query: 452 NEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLF 511
+ ++ ++ L KNG + EA +W +M+++G LD Y+ + + ++ +L
Sbjct: 208 TIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAK-ESPERVKELM 266
Query: 512 NQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDV--------------------LNIM 551
+M L+PD +YN L+ A+ + +S A V +N +
Sbjct: 267 EEM--SSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQPNAATFRTLIFHLCINGL 324
Query: 552 LDQGCD-----------PDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQ 595
DQG PDF TC + L N N +D R V R+VK++
Sbjct: 325 YDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKN-NRMEDARG-----VARIVKKK 373
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 163/345 (47%), Gaps = 12/345 (3%)
Query: 138 KSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFR 197
KS S++N E + R +E + C+S + N ++ ++ L + E+
Sbjct: 42 KSLTSLVN---GERNPKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILE 98
Query: 198 -GIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISA--LC 254
R+ + + + + ++ K G + A + +EM + FN L+SA L
Sbjct: 99 EQKKYRDMSKEGFA-ARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLS 157
Query: 255 KKGDLIRAA--KLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPN 312
KK D++ +L +S+K P+ V+YNTL+ LC K L +AV+LL+++ P+
Sbjct: 158 KKFDVVEELFNELPGKLSIK---PDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPD 214
Query: 313 DVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWK 372
VTF TL+ +G+ G + + E+ + Y++ + GL E K + + L+
Sbjct: 215 IVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFG 274
Query: 373 EMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAG 432
E+ G +P+ ++A+I G EGK DEA + E+ G+ P+ T++ L+ +AG
Sbjct: 275 ELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAG 334
Query: 433 DCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
D AI ++KE + + L++ L K K EA + K
Sbjct: 335 DFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVK 379
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 128/299 (42%), Gaps = 36/299 (12%)
Query: 73 IEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFH 132
+ +L A+ +EE+L++ K+ R + E I YGKA E A +F M
Sbjct: 81 VRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNR-D 139
Query: 133 CKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQA 192
CK++V SFN++L+ F E ++ + L+I+P+ +++N +IKALC+ + +A
Sbjct: 140 CKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEA 199
Query: 193 VEVFRGIHLRNCAPDSYTYSTL-----------------------------------MDG 217
V + I + PD T++TL + G
Sbjct: 200 VALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLG 259
Query: 218 LCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPN 277
L E + E V+L E++ G P+ F FN +I +G + A + G P+
Sbjct: 260 LANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPD 319
Query: 278 EVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVL 336
+ T+ L+ +C+ G A+ L + + + + T LV VK + + ++
Sbjct: 320 KATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIV 378
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 144/332 (43%), Gaps = 2/332 (0%)
Query: 117 PEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTF 176
P++ V F + + + ++ + ++ H E K ++ G
Sbjct: 54 PKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAA 113
Query: 177 NLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQI 236
+I K G+ + A +VF + R+C +++ L+ + D L +E+
Sbjct: 114 R-IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPG 172
Query: 237 EGTF-PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLN 295
+ + P+ +N LI ALC+K L A L+D + KG P+ VT+NTL+ KG+
Sbjct: 173 KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFE 232
Query: 296 KAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLI 355
+ +MV + T+ + G + ++ + ++ L+ G + + + ++++I
Sbjct: 233 LGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMI 292
Query: 356 SGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL 415
G EGK + A +KE+++ G P+ ++ L+ +C+ G + A E E +K +L
Sbjct: 293 RGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYL 352
Query: 416 PNSFTYSSLMRGFFEAGDCHKAILVWKEMKNN 447
T L+ + +A + K K N
Sbjct: 353 VGQTTLQQLVDELVKGSKREEAEEIVKIAKTN 384
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 128/278 (46%), Gaps = 13/278 (4%)
Query: 277 NEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVL 336
N Y+ V L +L+ +L + + + + ++ + K G + V
Sbjct: 73 NIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVF 132
Query: 337 ISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEK-GCEPNTVVYSALIDGLCR 395
+ R + + +++L+S KF+ +L+ E+ K +P+ V Y+ LI LC
Sbjct: 133 EEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCE 192
Query: 396 EGKADEAREYLIEMKNKGHLPNSFTY-----SSLMRGFFEAGDCHKAILVWKEMKNNSCN 450
+ EA L E++NKG P+ T+ SS ++G FE G+ +W +M +
Sbjct: 193 KDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEE-----IWAKMVEKNVA 247
Query: 451 HNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKL 510
+ Y+ + GL K E + ++ ++ + G+K DV ++++MI G N +D+
Sbjct: 248 IDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAW 307
Query: 511 FNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL 548
+ +++ +PD AT+ +LL A + + A+++
Sbjct: 308 YKEIVKH--GYRPDKATFALLLPAMCKAGDFESAIELF 343
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 111/234 (47%), Gaps = 5/234 (2%)
Query: 340 EERGHR--GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREG 397
E++ +R E + +IS K G FE+A ++++EM + C+ + + ++AL+
Sbjct: 99 EQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSK 158
Query: 398 KADEAREYLIEMKNKGHL-PNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCY 456
K D E E+ K + P+ +Y++L++ E +A+ + E++N + V +
Sbjct: 159 KFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTF 218
Query: 457 SILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLC 516
+ L+ G+ +W +M+ + + +D+ Y++ + G N + + LF ++
Sbjct: 219 NTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGEL-- 276
Query: 517 QEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
+ + L+PDV ++N ++ + + A ++ G PD T + L +
Sbjct: 277 KASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAM 330
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/269 (17%), Positives = 106/269 (39%), Gaps = 34/269 (12%)
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK 308
+IS K G A K+ + M + C + +++N L+ K + L N++
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 309 CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAM 368
+ D+ Y++LI L ++ A+
Sbjct: 175 SIKPDIV----------------------------------SYNTLIKALCEKDSLPEAV 200
Query: 369 QLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGF 428
L E+ KG +P+ V ++ L+ +G+ + E +M K + TY++ + G
Sbjct: 201 ALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGL 260
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
+ + ++ E+K + + ++ +I G GK+ EA +K+++ G + D
Sbjct: 261 ANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDK 320
Query: 489 VAYSSMIHGFCNAQLVDQGMKLFNQMLCQ 517
++ ++ C A + ++LF + +
Sbjct: 321 ATFALLLPAMCKAGDFESAIELFKETFSK 349
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 76/151 (50%), Gaps = 1/151 (0%)
Query: 417 NSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVW 476
N Y +R A H + +E K E + +I+ K G A V+
Sbjct: 73 NIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVF 132
Query: 477 KQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFY 536
++M +R K V+++++++ + ++ D +LFN+ L + ++PD+ +YN L+ A
Sbjct: 133 EEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNE-LPGKLSIKPDIVSYNTLIKALC 191
Query: 537 QQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
+++++ A+ +L+ + ++G PD +T + L
Sbjct: 192 EKDSLPEAVALLDEIENKGLKPDIVTFNTLL 222
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 86/196 (43%), Gaps = 8/196 (4%)
Query: 373 EMMEKGCEP-----NTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRG 427
E +K CE N VY + L + E L E K + + ++
Sbjct: 59 EKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISL 118
Query: 428 FFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSR-GIKL 486
+ +AG A V++EM N C + + ++ L++ + K ++ ++ + IK
Sbjct: 119 YGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKP 178
Query: 487 DVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMD 546
D+V+Y+++I C + + + L +++ + L+PD+ T+N LL + Y + +
Sbjct: 179 DIVSYNTLIKALCEKDSLPEAVALLDEI--ENKGLKPDIVTFNTLLLSSYLKGQFELGEE 236
Query: 547 VLNIMLDQGCDPDFIT 562
+ M+++ D T
Sbjct: 237 IWAKMVEKNVAIDIRT 252
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 127/256 (49%), Gaps = 10/256 (3%)
Query: 68 SFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRM 127
S++ I KL A+ + +++++ Q+ R + E + I + KA +AVN+F M
Sbjct: 174 SYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHM 233
Query: 128 --EAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSL-------NIQPNGLTFNL 178
C+ T+++++ + ++ G+ Y +SL I+P+ N
Sbjct: 234 VTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNC 293
Query: 179 VIKALCKVGLVDQAVEVFRGIHL-RNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
++K V+ A+ +F + + +C P+S+TY L+ GLC +GR A LL EM+ +
Sbjct: 294 LVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGK 353
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G PN +N L++A G++ A K + M G V + ++Y TLVD CRKGK ++A
Sbjct: 354 GFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEA 413
Query: 298 VSLLNQMVANKCVPND 313
LL + + V D
Sbjct: 414 TRLLEMLREKQLVDRD 429
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 109/225 (48%), Gaps = 17/225 (7%)
Query: 275 VPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK---CVPNDVTFGTLVHGFVKQGRAS- 330
+ NE YN+++ + GKL +AV++ MV +K C P T+ L + +G S
Sbjct: 204 IGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSY 263
Query: 331 -------DGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEM-MEKGCEPN 382
S+ + + G + + + L+ G A++++ +M + CEPN
Sbjct: 264 INHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPN 323
Query: 383 TVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWK 442
+ Y LI GLC +G+ ARE L EMK KG +PN +Y+SL+ F +G+ A+
Sbjct: 324 SFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLW 383
Query: 443 EMKNNSCNHNEVCYSILINGLCKNGKLMEA-----MMVWKQMLSR 482
EM N + + Y L++ C+ GK EA M+ KQ++ R
Sbjct: 384 EMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDR 428
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 12/214 (5%)
Query: 176 FNLVIKALCKVGLVDQAVEVFRG-IHLRN--CAPDSYTYSTLMDGLCKEGR--------I 224
+N +I K G + +AV +FR + +N C P TY L L G +
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 225 DEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSL-KGCVPNEVTYNT 283
+ SL +M G P+ F N L+ + A ++ MS+ C PN TY+
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDY 329
Query: 284 LVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERG 343
L+ GLC +G+ A LL++M VPN ++ +LV+ F G D L + E G
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
Query: 344 HRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEK 377
+ Y +L+ ++GK++ A +L + + EK
Sbjct: 390 RVVDFISYRTLVDESCRKGKYDEATRLLEMLREK 423
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 100/223 (44%), Gaps = 14/223 (6%)
Query: 344 HRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG---CEPNTVVYSALIDGLCREGK-- 398
H GNE +Y+S+I K GK A+ +++ M+ C P Y L L G
Sbjct: 203 HIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNS 262
Query: 399 ------ADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKN-NSCNH 451
+ R +M + G P+ F + L++G+ + + A+ ++ +M C
Sbjct: 263 YINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEP 322
Query: 452 NEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLF 511
N Y LI+GLC G+ + A + +M +G + +Y+S+++ F + +D +K
Sbjct: 323 NSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCL 382
Query: 512 NQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQ 554
+M+ E D +Y L++ ++ A +L ++ ++
Sbjct: 383 WEMI--ENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREK 423
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 183/388 (47%), Gaps = 8/388 (2%)
Query: 153 FHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVF---RGIHLRNCAPDSY 209
+ ++ + + +S+ ++P+ + +++A K+G + VE+F + L A +S
Sbjct: 189 YSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESG 248
Query: 210 T-YSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDN 268
+ Y+ + L K GR EA+ +L+EM+ +G + ++++LI A + +++ KL
Sbjct: 249 SIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKE 308
Query: 269 MSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGR 328
K + + +V R+G + + ++ M + D +V+GF KQ
Sbjct: 309 AGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRG 368
Query: 329 ASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSA 388
++ V + + Y+ I+ + K+ A L+ EM++KG + V YS
Sbjct: 369 FAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSN 428
Query: 389 LIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNS 448
++D + + +A + +MK +G PN + Y+SL+ A D +A +WKEMK
Sbjct: 429 IMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAK 488
Query: 449 CNHNEVCYSILINGLCKNGKLMEAMMVWKQM-LSRGIKLDVVAYSSMIHGFCNAQLVDQG 507
++V Y+ +I+ ++ +L + ++++ ++RG K+D M+ F +D+
Sbjct: 489 VLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRG-KIDRAMAGIMVGVFSKTSRIDEL 547
Query: 508 MKLFNQMLCQEAELQPDVATYNILLNAF 535
M+L M + L D Y+ LNA
Sbjct: 548 MRLLQDMKVEGTRL--DARLYSSALNAL 573
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 90/192 (46%), Gaps = 8/192 (4%)
Query: 385 VYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEM 444
+Y+ + L + G+A EA E L EMK+KG +S YS L+R F EA + ++KE
Sbjct: 250 IYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEA 309
Query: 445 KNNSC-NHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQL 503
E+C +++ + G + + V M +K+ ++++GF +
Sbjct: 310 GGKKLLKDPEMCLKVVLM-YVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRG 368
Query: 504 VDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT- 562
+ +K++ + +E E TY I +NA+ + ++A + + M+ +G D +
Sbjct: 369 FAEAVKVYEWAMKEECE--AGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAY 426
Query: 563 ---CDIFLKTLR 571
D++ KT R
Sbjct: 427 SNIMDMYGKTRR 438
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 165/378 (43%), Gaps = 23/378 (6%)
Query: 119 KAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNL 178
KA+ F T SF L+++ + +F +A + V K PN L+F
Sbjct: 85 KALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAWALMAEVRKDY---PNLLSFKS 141
Query: 179 VIKALCKV---GLVDQAVEVF----RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLL 231
+ LCK+ G ++ +E F + I + D + + L+ C E + EA S+
Sbjct: 142 MSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEF--NILLRAFCTEREMKEARSIF 199
Query: 232 DEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRK 291
+++ P+ N+L+ + GD+ M +G PN VTY +DG C+K
Sbjct: 200 EKLHSRFN-PDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKK 258
Query: 292 GKLNKAVSLLNQMVANKCVPNDVT---FGTLVHGFVKQGRASDGASVLISLEERGHRGNE 348
+A+ L M + D+T TL+HG + + +RG +
Sbjct: 259 RNFGEALRLFEDM---DRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDC 315
Query: 349 YIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGL--CREGKADEAREYL 406
Y++L+S L K G A+++ KEM EKG EP++V + ++ G+ +E + EY
Sbjct: 316 GAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYY 375
Query: 407 IEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEM-KNNSCNHNEVCYSILINGLCK 465
+MK + +P + T LM+ F G+ + + +WK M + C H +L LC
Sbjct: 376 QKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHAL-ELLTTALCA 434
Query: 466 NGKLMEAMMVWKQMLSRG 483
+ +A Q + RG
Sbjct: 435 RRRANDAFECSWQTVERG 452
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 122/290 (42%), Gaps = 5/290 (1%)
Query: 118 EKAVNLFHRMEAE-FHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTF 176
E+ + F +ME E F K V FN +L E A + + N P+ T
Sbjct: 156 EETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSRFN--PDVKTM 213
Query: 177 NLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQI 236
N+++ + G V + + R P+S TY +DG CK+ EA+ L ++M
Sbjct: 214 NILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDR 273
Query: 237 EGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNK 296
+ LI + I+A +L D +S +G P+ YN L+ L + G ++
Sbjct: 274 LDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSG 333
Query: 297 AVSLLNQMVANKCVPNDVTFGTLVHGFVKQGR-ASDGA-SVLISLEERGHRGNEYIYSSL 354
A+ ++ +M P+ VTF ++ G +K +G ++ER L
Sbjct: 334 AIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVML 393
Query: 355 ISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE 404
+ G+ + LWK M+EKG P+ L LC +A++A E
Sbjct: 394 MKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFE 443
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 107/213 (50%), Gaps = 5/213 (2%)
Query: 352 SSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVV--YSALIDGLCREGKADEAREYLIEM 409
S L+ + K G +E ++ + +M ++ V ++ L+ C E + EAR ++
Sbjct: 143 SILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKL 202
Query: 410 KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKL 469
++ + P+ T + L+ GF EAGD L + EM N V Y I I+G CK
Sbjct: 203 HSRFN-PDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNF 261
Query: 470 MEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYN 529
EA+ +++ M + V +++IHG A+ + +LF+++ + L PD YN
Sbjct: 262 GEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEI--SKRGLTPDCGAYN 319
Query: 530 ILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
L+++ + ++S A+ V+ M ++G +PD +T
Sbjct: 320 ALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVT 352
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 136/334 (40%), Gaps = 45/334 (13%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQ-MKRERRVFIEK----NFIVIFKAYGKAHFPEKAV 121
LSF S+ L + F S EE L+ +K E+ +F +K F ++ +A+ ++A
Sbjct: 137 LSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEAR 196
Query: 122 NLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIK 181
++F ++ + F+ VK+ N +L + G A E + H +PN +T+ + I
Sbjct: 197 SIFEKLHSRFN--PDVKTMNILLLGFKEAGDV-TATELFYHEMVKRGFKPNSVTYGIRID 253
Query: 182 ALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFP 241
CK +A+ +F + + +TL+ G +A L DE+ G P
Sbjct: 254 GFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTP 313
Query: 242 NPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGL------------- 288
+ +N L+S+L K GD+ A K++ M KG P+ VT++++ G+
Sbjct: 314 DCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCE 373
Query: 289 ------------------------CRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFV 324
C G++N + L M+ P+ L
Sbjct: 374 YYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALC 433
Query: 325 KQGRASDGASVLISLEERGHRGNEYIYSSLISGL 358
+ RA+D ERG +E +Y L + L
Sbjct: 434 ARRRANDAFECSWQTVERGRCVSEPVYRMLETSL 467
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 131/301 (43%), Gaps = 14/301 (4%)
Query: 224 IDEAVSLLDEMQIEGTFPNPFVFNVLISALCK-------KGDLIRAAKLVDNMSLKGCVP 276
D+A +L+ E++ + +PN F + LCK + L K+ + K
Sbjct: 119 FDQAWALMAEVRKD--YPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGV 176
Query: 277 NEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVL 336
+E +N L+ C + ++ +A S+ ++ ++ P+ T L+ GF + G +
Sbjct: 177 DE--FNILLRAFCTEREMKEARSIFEKL-HSRFNPDVKTMNILLLGFKEAGDVTATELFY 233
Query: 337 ISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCRE 396
+ +RG + N Y I G K+ F A++L+++M + + + LI G
Sbjct: 234 HEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVA 293
Query: 397 GKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCY 456
+AR+ E+ +G P+ Y++LM + GD AI V KEM+ + V +
Sbjct: 294 RNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTF 353
Query: 457 SILINGLCKNGK--LMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
+ G+ K+ + +++M R + ++ FC+ V+ G+ L+ M
Sbjct: 354 HSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYM 413
Query: 515 L 515
L
Sbjct: 414 L 414
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 172/399 (43%), Gaps = 47/399 (11%)
Query: 107 IFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKS 166
I K K + + + + E C VK+ VL + Q AL
Sbjct: 104 ILKIRAKPDLIKYVIESYRKEE----CFVNVKTMRIVLTLCNQANLADEALWVLRKF-PE 158
Query: 167 LNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDE 226
N+ + + +NLVI+ G ++ A + + + PD TY+++++G C G+ID+
Sbjct: 159 FNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDD 218
Query: 227 AVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLK---GCV-PNEVTYN 282
A L EM N ++ ++ +CK GD+ RA +L+ M + G + PN VTY
Sbjct: 219 AWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYT 278
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLIS-LEE 341
++ C K ++ +A+ +L++M C+PN VT L+ G ++ S LI L +
Sbjct: 279 LVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVK 338
Query: 342 RGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADE 401
G +SS L + ++E A ++++ M+ +G P+ + S + LC
Sbjct: 339 LGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELC------- 391
Query: 402 AREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEM--KNNSCNHNEVCYSIL 459
L+ + DC L+++E+ K+ + +++L
Sbjct: 392 ----------------------LLERYL---DC---FLLYQEIEKKDVKSTIDSDIHAVL 423
Query: 460 INGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGF 498
+ GLC+ G EA + K ML + ++L V +I
Sbjct: 424 LLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEAL 462
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 160/354 (45%), Gaps = 9/354 (2%)
Query: 208 SYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV- 266
+Y Y+ D L + D +++ + E F N ++++ LC + +L A V
Sbjct: 95 AYMYTKACDILKIRAKPDLIKYVIESYRKEECFVNVKTMRIVLT-LCNQANLADEALWVL 153
Query: 267 DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQ 326
+ V YN ++ KG LN A L+ +M P+ +T+ ++++G+
Sbjct: 154 RKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNA 213
Query: 327 GRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG----CEPN 382
G+ D + + + N YS ++ G+ K G E A++L EM ++ PN
Sbjct: 214 GKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPN 273
Query: 383 TVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAI--LV 440
V Y+ +I C + + +EA L M N+G +PN T L++G E + KA+ L+
Sbjct: 274 AVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLI 333
Query: 441 WKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCN 500
K +K + +E C+S L + + EA +++ ML RG++ D +A S + C
Sbjct: 334 DKLVKLGGVSLSE-CFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCL 392
Query: 501 AQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQ 554
+ L+ ++ ++ + D + +LL QQ N A + MLD+
Sbjct: 393 LERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDK 446
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 185/418 (44%), Gaps = 57/418 (13%)
Query: 240 FPNPFVFNVLISALCKKGDLIRAAKLVDNMS--------LKGCVPNE----VTYNTLVDG 287
PN + ++ +L + I A + + +S L+GC N + N +D
Sbjct: 1 MPNSLISRLVSPSLRSQPSKISALRFLTTVSAAERLYGQLQGCTSNLEKELASANVQLDS 60
Query: 288 LCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGN 347
C +N+ V +C PN F + + F+ G S HR +
Sbjct: 61 SC-----------INE-VLRRCDPNQ--FQSGLRFFIWAGTLS------------SHRHS 94
Query: 348 EYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGK-ADEAREYL 406
Y+Y+ L K + + + ++ C N V ++ LC + ADEA L
Sbjct: 95 AYMYTKACDILKIRAKPDLIKYVIESYRKEECFVN-VKTMRIVLTLCNQANLADEALWVL 153
Query: 407 IEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKN 466
+ ++ Y+ ++R F + GD + A ++ KEM + + Y+ +ING C
Sbjct: 154 RKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNA 213
Query: 467 GKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAE--LQPD 524
GK+ +A + K+M L+ V YS ++ G C + +++ ++L +M ++ + P+
Sbjct: 214 GKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPN 273
Query: 525 VATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFL 584
TY +++ AF ++ + A+ VL+ M ++GC P+ +T + ++ + +N + + +
Sbjct: 274 AVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLI 333
Query: 585 DELV---------------VRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLC 627
D+LV V L++ +R A KI +ML R + P+ + V ++LC
Sbjct: 334 DKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELC 391
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 123/246 (50%), Gaps = 5/246 (2%)
Query: 169 IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLR-NCAPDSYTYSTLMDGLCKEGRIDEA 227
I+PN TFN ++ + + G + ++R + C+P+ Y+Y+ LM+ C G + EA
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 228 VSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDG 287
+ +EM++ G + +N +I LC ++++A +L +M LKG +TY LV+G
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNG 360
Query: 288 LCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFV--KQG-RASDGASVLI-SLEERG 343
C+ G ++ + + +M + +T LV G + G R + A ++ ++ E
Sbjct: 361 YCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAM 420
Query: 344 HRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAR 403
+ Y L+ L ++GK + A+ + EM+ KG +P+ Y A IDG G + +
Sbjct: 421 FYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSA 480
Query: 404 EYLIEM 409
IEM
Sbjct: 481 LLAIEM 486
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 120/247 (48%), Gaps = 5/247 (2%)
Query: 206 PDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE-GTFPNPFVFNVLISALCKKGDLIRAAK 264
P++ T++++M +EG + + EM+ E G PN + +NVL+ A C +G + A K
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 265 LVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFV 324
+ + M ++G V + V YNT++ GLC ++ KA L M +T+ LV+G+
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Query: 325 KQGRASDGASVLISLEERGHRGNEYIYSSLISGLF--KEGK--FEHAMQLWKEMMEKGCE 380
K G G V ++ +G + +L+ GL ++G+ E A + + E
Sbjct: 363 KAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFY 422
Query: 381 PNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILV 440
P+ Y L+ LC +GK D A EM KG P+ TY + + G+ GD + L+
Sbjct: 423 PSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALL 482
Query: 441 WKEMKNN 447
EM +
Sbjct: 483 AIEMAES 489
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 144/309 (46%), Gaps = 45/309 (14%)
Query: 349 YIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKA--------- 399
+++ LI + + A+ + +++ +G +ALI + R A
Sbjct: 163 FVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYRE 222
Query: 400 ---------DEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNN-SC 449
DEA++ + ++K PN+ T++S+M F+ G+ +W+EM+ C
Sbjct: 223 VFGLDDVSVDEAKKMIGKIK-----PNATTFNSMMVSFYREGETEMVERIWREMEEEVGC 277
Query: 450 NHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMK 509
+ N Y++L+ C G + EA VW++M RG+ D+VAY++MI G C+ V + +
Sbjct: 278 SPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKE 337
Query: 510 LFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKT 569
LF M + E TY L+N + + ++ + V M +G + D +T + ++
Sbjct: 338 LFRDMGLKGIECT--CLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEG 395
Query: 570 LRDNMNPPQDGREFLDELVVRLVKRQRTIGASKII-EVMLDRCLLPEASTWAIVVQQLCK 628
L D+ +DG QR + A+ I+ + + + P + + ++V++LC+
Sbjct: 396 LCDD----RDG--------------QRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCE 437
Query: 629 PRNIRKAIS 637
+ +A++
Sbjct: 438 DGKMDRALN 446
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 130/309 (42%), Gaps = 53/309 (17%)
Query: 243 PFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKG------KLNK 296
PFVF++LI + ++ A ++ + +G T N L+ + R+ K+ +
Sbjct: 162 PFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYR 221
Query: 297 AVSLLNQMVAN-------KCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER-GHRGNE 348
V L+ + + K PN TF +++ F ++G + +EE G N
Sbjct: 222 EVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNV 281
Query: 349 YIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIE 408
Y Y+ L+ G A ++W+EM +G + V Y+ +I GLC + +A+E +
Sbjct: 282 YSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRD 341
Query: 409 MKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNS---------------CNHNE 453
M KG TY L+ G+ +AGD ++V++EMK C+ +
Sbjct: 342 MGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRD 401
Query: 454 V------------------------CYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVV 489
CY +L+ LC++GK+ A+ + +M+ +G K
Sbjct: 402 GQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQE 461
Query: 490 AYSSMIHGF 498
Y + I G+
Sbjct: 462 TYRAFIDGY 470
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/486 (22%), Positives = 209/486 (43%), Gaps = 84/486 (17%)
Query: 136 TVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEV 195
T+ SF+S++ + + F +++ +S + S + P+ + V+ L KV A +V
Sbjct: 80 TIYSFSSLIYALTKAKLFTQSIGVFSRMF-SHGLIPD----SHVLPNLFKVCAELSAFKV 134
Query: 196 FRGIHLRNCAP----DSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLIS 251
+ IH +C D++ ++ + GR+ +A + D M + + + L+
Sbjct: 135 GKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK----DVVTCSALLC 190
Query: 252 ALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVP 311
A +KG L +++ M G N V++N ++ G R G +AV + ++ P
Sbjct: 191 AYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCP 250
Query: 312 NDVT---------------FGTLVHGFV-KQGRASDGASVLISLEERGHRGNEYIYSSL- 354
+ VT G L+HG+V KQG D + ++ G G+ Y SL
Sbjct: 251 DQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLF 310
Query: 355 --------------ISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD 400
I+GL + G + A+++++ E+ E N V ++++I G + GK
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 401 EAREYLIEMKNKGHLPNSFTYSSLMRG--------------------------------- 427
EA E EM+ G PN T S++
Sbjct: 371 EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALI 430
Query: 428 --FFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIK 485
+ + G + + +V+ M N VC++ L+NG +GK E M +++ ++ +K
Sbjct: 431 DMYAKCGRINLSQIVFNMMPTK----NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLK 486
Query: 486 LDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAM 545
D ++++S++ L D+G K F +M+ +E ++P + Y+ ++N + + A
Sbjct: 487 PDFISFTSLLSACGQVGLTDEGWKYF-KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAY 545
Query: 546 DVLNIM 551
D++ M
Sbjct: 546 DLIKEM 551
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 181/438 (41%), Gaps = 71/438 (16%)
Query: 171 PNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKE------GRI 224
P +F+ +I AL K L Q++ VF + PDS+ L +C E G+
Sbjct: 79 PTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFK-VCAELSAFKVGKQ 137
Query: 225 DEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTL 284
VS + + ++ FV + + G + A K+ D MS K + VT + L
Sbjct: 138 IHCVSCVSGLDMDA-----FVQGSMFHMYMRCGRMGDARKVFDRMSDK----DVVTCSAL 188
Query: 285 VDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGH 344
+ RKG L + V +L++M ++ N V++ ++ GF + G + + + G
Sbjct: 189 LCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGF 248
Query: 345 RGNEYIYSSLI-----SGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKA 399
++ SS++ S + G+ H + + +++ C V SA+ID + G
Sbjct: 249 CPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKC-----VISAMIDMYGKSGHV 303
Query: 400 DEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSIL 459
+I + N+ + + ++ + G G KA+ +++ K + N V ++ +
Sbjct: 304 ----YGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSI 359
Query: 460 INGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI---------------HGFC----- 499
I G +NGK +EA+ ++++M G+K + V SM+ HGF
Sbjct: 360 IAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419
Query: 500 ------NAQLVDQGMK---------LFNQMLCQEAELQPDVATYNILLNAFYQQNNISRA 544
+ L+D K +FN M + ++ +N L+N F
Sbjct: 420 LDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK------NLVCWNSLMNGFSMHGKAKEV 473
Query: 545 MDVLNIMLDQGCDPDFIT 562
M + ++ PDFI+
Sbjct: 474 MSIFESLMRTRLKPDFIS 491
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 129/259 (49%), Gaps = 8/259 (3%)
Query: 50 EIFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFK 109
EIF S + +++ S LI KL F ++++L + + + F + K
Sbjct: 69 EIFDYASQQ-PNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIK 127
Query: 110 AYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVII-QEGHFHRALEFYSHVCKSLN 168
Y +A PEK ++ F++M EF+ K N +L+V++ G+ +A E + +
Sbjct: 128 VYAEAKLPEKVLSTFYKM-LEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKS-SRLHG 185
Query: 169 IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAV 228
+ PN ++NL+++A C + A ++F + R+ PD +Y L+ G C++G+++ A+
Sbjct: 186 VMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAM 245
Query: 229 SLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGL 288
LLD+M +G P+ LI LC +G K ++ M KG P+ N LV G
Sbjct: 246 ELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGF 301
Query: 289 CRKGKLNKAVSLLNQMVAN 307
C GK+ +A ++ ++ N
Sbjct: 302 CSFGKVEEACDVVEVVMKN 320
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 111/236 (47%), Gaps = 5/236 (2%)
Query: 172 NGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCK-EGRIDEAVSL 230
G F +IK + L ++ + F + N P + ++D L G + +A L
Sbjct: 118 TGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFEL 177
Query: 231 LDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCR 290
++ G PN +N+L+ A C DL A +L M + VP+ +Y L+ G CR
Sbjct: 178 FKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCR 237
Query: 291 KGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYI 350
KG++N A+ LL+ M+ VP+ TL+ G QG +G L + +G + +
Sbjct: 238 KGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSV 293
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYL 406
+ L+ G GK E A + + +M+ G ++ + +I +C E ++++ + +L
Sbjct: 294 SNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFL 349
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 127/279 (45%), Gaps = 20/279 (7%)
Query: 344 HRGNEY-----IYSSLISGLFKEGKF-EHAMQLWKEMMEKGCEPNTVVYSALIDGLC-RE 396
HR + Y I++ LI ++ E K E + + +M+E P + ++D L
Sbjct: 110 HRSSGYPLTGEIFTYLIK-VYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHR 168
Query: 397 GKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCY 456
G +A E + G +PN+ +Y+ LM+ F D A ++ +M + Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 457 SILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLC 516
ILI G C+ G++ AM + ML++G V ++I G C+ + D+G K +M+
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGF----VPDRTLIGGLCDQGMFDEGKKYLEEMIS 284
Query: 517 QEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNP 576
+ P + N L+ F + A DV+ +++ G T ++ + L N +
Sbjct: 285 K--GFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIP-LICNEDE 341
Query: 577 PQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPE 615
+ + FL++ V ++ G ++I++V ++ +PE
Sbjct: 342 SEKIKLFLEDAV-----KEEITGDTRIVDVGIENKKMPE 375
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 109/229 (47%), Gaps = 33/229 (14%)
Query: 419 FTYSSLMRGFFEAGDCHKAI-LVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
FTY L++ + EA K + +K ++ N + IL + G L +A ++K
Sbjct: 122 FTY--LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFK 179
Query: 478 QMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQ 537
G+ + +Y+ ++ FC + +LF +ML E ++ PDV +Y IL+ F +
Sbjct: 180 SSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML--ERDVVPDVDSYKILIQGFCR 237
Query: 538 QNNISRAMDVLNIMLDQGCDPDFIT----CDIFLKTLRDNMNPPQDGREFLDELVVR--- 590
+ ++ AM++L+ ML++G PD CD + + D +G+++L+E++ +
Sbjct: 238 KGQVNGAMELLDDMLNKGFVPDRTLIGGLCD---QGMFD------EGKKYLEEMISKGFS 288
Query: 591 --------LVKRQRTIG----ASKIIEVMLDRCLLPEASTWAIVVQQLC 627
LVK + G A ++EV++ + TW +V+ +C
Sbjct: 289 PHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 337
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 147/319 (46%), Gaps = 2/319 (0%)
Query: 87 ELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNV 146
EL Q+M E V + + + AY ++ + A L RM++ +C+ V +++ ++
Sbjct: 171 ELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKS 230
Query: 147 IIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGL-VDQAVEVFRGIHLRNCA 205
+Q F + + S + + I+PN +T+N +I A K + V+ + + + +C
Sbjct: 231 FLQVFAFDKVQDLLSDMRRQ-GIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCK 289
Query: 206 PDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKL 265
PDS+T ++ + G+I+ + ++ Q G PN FN+L+ + K G+ + + +
Sbjct: 290 PDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAV 349
Query: 266 VDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVK 325
++ M VTYN ++D R G L + L M + + P+ VT +LV + +
Sbjct: 350 MEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGR 409
Query: 326 QGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVV 385
+A VL +E R + ++ L+ + KF + + M +KG +P+ +
Sbjct: 410 ASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKIT 469
Query: 386 YSALIDGLCREGKADEARE 404
Y ++ G +E
Sbjct: 470 YRTMVKAYRISGMTTHVKE 488
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 169/391 (43%), Gaps = 12/391 (3%)
Query: 119 KAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHR--------ALEFYSHVCKSLNIQ 170
KA+++ R EA + K +L + E R A++ + + + L +
Sbjct: 88 KAISIILRREATKSIIEKKKGSKKLLPRTVLESLHERITALRWESAIQVFELLREQLWYK 147
Query: 171 PNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSL 230
PN + +I L K ++A E+F+ + C + Y+ L+ + GR D A +L
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207
Query: 231 LDEMQIEGT-FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
L+ M+ P+ +++LI + + + L+ +M +G PN +TYNTL+D
Sbjct: 208 LERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYG 267
Query: 290 RKGKLNKAVSLLNQMVA-NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNE 348
+ + S L QM+ + C P+ T + + F G+ + + G N
Sbjct: 268 KAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNI 327
Query: 349 YIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIE 408
++ L+ K G ++ + + M + V Y+ +ID R G + EYL
Sbjct: 328 RTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQM-EYLFR 386
Query: 409 -MKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNG 467
M+++ P+ T SL+R + A K V + ++N+ + V ++ L++ +
Sbjct: 387 LMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRME 446
Query: 468 KLMEAMMVWKQMLSRGIKLDVVAYSSMIHGF 498
K E V + M +G K D + Y +M+ +
Sbjct: 447 KFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 152/335 (45%), Gaps = 8/335 (2%)
Query: 241 PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSL 300
PN ++ LI L K +A +L M +GCV N Y LV R G+ + A +L
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207
Query: 301 LNQM-VANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
L +M ++ C P+ T+ L+ F++ +L + +G R N Y++LI
Sbjct: 208 LERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYG 267
Query: 360 KEGKF-EHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNS 418
K F E L + + E C+P++ ++ + G+ + + ++ G PN
Sbjct: 268 KAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNI 327
Query: 419 FTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQ 478
T++ L+ + ++G+ K V + M+ + V Y+++I+ + G L + +++
Sbjct: 328 RTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRL 387
Query: 479 MLSRGIKLDVVAYSSMIHGFCNAQLVDQ--GMKLFNQMLCQEAELQPDVATYNILLNAFY 536
M S I V S++ + A D+ G+ F + ++++ D+ +N L++A+
Sbjct: 388 MQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRF----IENSDIRLDLVFFNCLVDAYG 443
Query: 537 QQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLR 571
+ + VL +M +G PD IT +K R
Sbjct: 444 RMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYR 478
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 186/399 (46%), Gaps = 19/399 (4%)
Query: 141 NSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIH 200
NS L+ +++ G +A + + K N+ G T++L++KA+ +V + A+ +FR +
Sbjct: 146 NSFLSCLLRNGDIQKAFTVFEFMRKKENV--TGHTYSLMLKAVAEVKGCESALRMFRELE 203
Query: 201 L---RNCAPDSYTYSTLMDGLCKEGRID---EAVSLLDEMQIEGTFPNPFVFNVLISALC 254
R D Y+T + LC GRI+ E + M+ +G +++L+S
Sbjct: 204 REPKRRSCFDVVLYNTAI-SLC--GRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFV 260
Query: 255 KKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDV 314
+ G A + D M E ++ ++ K + A+ + M+ PN V
Sbjct: 261 RCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLV 320
Query: 315 TFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEM 374
TL++ K G+ V L+ GH+ +EY +++L++ L+K ++E +QL+ +
Sbjct: 321 ACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMI 380
Query: 375 M-EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGD 433
E C N +Y+ + + G ++A + L EM+ G ++ +Y+ ++ ++
Sbjct: 381 RSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRK 440
Query: 434 CHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSS 493
A+LV++ M C N Y L+ C G L + + + + + ++ DV Y++
Sbjct: 441 SKVALLVYEHMAQRDCKPNTFTYLSLVRS-CIWGSLWDEV----EDILKKVEPDVSLYNA 495
Query: 494 MIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILL 532
IHG C + +L+ +M +E L+PD T ++L
Sbjct: 496 AIHGMCLRREFKFAKELYVKM--REMGLEPDGKTRAMML 532
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 176/437 (40%), Gaps = 80/437 (18%)
Query: 210 TYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNM 269
T S + L + ++ A+ L D M+ G PN N +S L + GD+ +A + + M
Sbjct: 109 TLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFM 168
Query: 270 -------------------SLKGCVP------------------NEVTYNTLVDGLCRKG 292
+KGC + V YNT + R
Sbjct: 169 RKKENVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRIN 228
Query: 293 KLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYS 352
+ + + M + + ++T+ LV FV+ GR+ V + E
Sbjct: 229 NVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMY 288
Query: 353 SLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK 412
++IS KE K++ A+++++ M++KG +PN V + LI+ L + GK + +K+
Sbjct: 289 AMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSL 348
Query: 413 GHLPNSFTYSSLMRGFFEA------------------------------------GDCHK 436
GH P+ +T+++L+ ++A G K
Sbjct: 349 GHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEK 408
Query: 437 AILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIH 496
A+ + EM+ + + Y+++I+ K+ K A++V++ M R K + Y S++
Sbjct: 409 AVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVR 468
Query: 497 GFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGC 556
L D+ + + ++PDV+ YN ++ + A ++ M + G
Sbjct: 469 SCIWGSLWDEVEDILKK-------VEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGL 521
Query: 557 DPDFITCDIFLKTLRDN 573
+PD T + L+ L+ +
Sbjct: 522 EPDGKTRAMMLQNLKKH 538
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 125/280 (44%), Gaps = 15/280 (5%)
Query: 277 NEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVL 336
NE T + + L R K+ A+ L + M PN + + ++ G +V
Sbjct: 106 NEETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVF 165
Query: 337 ISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEP------NTVVYSALI 390
+ ++ + + YS ++ + + E A+++++E+ EP + V+Y+ I
Sbjct: 166 EFMRKKENVTG-HTYSLMLKAVAEVKGCESALRMFRELER---EPKRRSCFDVVLYNTAI 221
Query: 391 DGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCN 450
R E MK GH+ TYS L+ F G A+ V+ EM NN +
Sbjct: 222 SLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKIS 281
Query: 451 HNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKL 510
E +I+ K K A+ +++ ML +G+K ++VA +++I+ A V K+
Sbjct: 282 LREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKV 341
Query: 511 FNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNI 550
++ + + +PD T+N LL A Y+ N R DVL +
Sbjct: 342 YSVL--KSLGHKPDEYTWNALLTALYKAN---RYEDVLQL 376
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 194/445 (43%), Gaps = 35/445 (7%)
Query: 90 QQMKRERRVFIEKN------FIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSV 143
+ + R+VF E + + I ++Y K P+ A+ +F RM EF C+ + +V
Sbjct: 176 RSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNV 235
Query: 144 LNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRN 203
L G + + S IQ N N ++ K G++D+A VF + ++
Sbjct: 236 LPPCASLGTHSLGKQLHCFAVTSEMIQ-NMFVGNCLVDMYAKCGMMDEANTVFSNMSVK- 293
Query: 204 CAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAA 263
D +++ ++ G + GR ++AV L ++MQ E + ++ IS ++G A
Sbjct: 294 ---DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEAL 350
Query: 264 KLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNK-------AVSLLNQMVANKCVPNDVTF 316
+ M G PNEVT +++ G G L A+ + N ++
Sbjct: 351 GVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI 410
Query: 317 GTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMME 376
L+ + K + ++ SL + + ++ +I G + G A++L EM E
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPK--ERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468
Query: 377 KGCE--PNTVVYS-ALID----GLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF 429
+ C+ PN S AL+ R GK A ++N+ + F + L+ +
Sbjct: 469 EDCQTRPNAFTISCALVACASLAALRIGKQIHA----YALRNQQNAVPLFVSNCLIDMYA 524
Query: 430 EAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVV 489
+ G A LV+ M NEV ++ L+ G +G EA+ ++ +M G KLD V
Sbjct: 525 KCGSISDARLVFDNMMAK----NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGV 580
Query: 490 AYSSMIHGFCNAQLVDQGMKLFNQM 514
+++ ++ ++DQGM+ FN+M
Sbjct: 581 TLLVVLYACSHSGMIDQGMEYFNRM 605
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 90/426 (21%), Positives = 179/426 (42%), Gaps = 94/426 (22%)
Query: 176 FNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKE------GRIDEAVS 229
+N +I++ G ++ + +F +H + PD+YT+ + C E G A+S
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKA-CGEISSVRCGESAHALS 153
Query: 230 LLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
L + G N FV N L++ + L A K+ D MS V + V++N++++
Sbjct: 154 L-----VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMS----VWDVVSWNSIIESYA 204
Query: 290 RKGKLNKAVSLLNQMVAN-KCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNE 348
+ GK A+ + ++M C P+++T ++ G S
Sbjct: 205 KLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHS------------------ 246
Query: 349 YIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIE 408
GK H + EM++ N V + L+D + G DEA
Sbjct: 247 ------------LGKQLHCFAVTSEMIQ-----NMFVGNCLVDMYAKCGMMDEANTVFSN 289
Query: 409 MKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGK 468
M K + ++++++ G+ + G A+ ++++M+ + V +S I+G + G
Sbjct: 290 MSVK----DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345
Query: 469 LMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKL------------------ 510
EA+ V +QMLS GIK + V S++ G + + G ++
Sbjct: 346 GYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGD 405
Query: 511 ----FNQML-----CQEAE--------LQP---DVATYNILLNAFYQQNNISRAMDVLNI 550
NQ++ C++ + L P DV T+ +++ + Q + ++A+++L+
Sbjct: 406 ENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSE 465
Query: 551 MLDQGC 556
M ++ C
Sbjct: 466 MFEEDC 471
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 177/431 (41%), Gaps = 38/431 (8%)
Query: 82 FASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFN 141
FA E++Q M F+ + Y K ++A +F M + V S+N
Sbjct: 254 FAVTSEMIQNM------FVGNCLV---DMYAKCGMMDEANTVFSNMSV-----KDVVSWN 299
Query: 142 SVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHL 201
+++ Q G F A+ + + + I+ + +T++ I + GL +A+ V R +
Sbjct: 300 AMVAGYSQIGRFEDAVRLFEKM-QEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358
Query: 202 RNCAPDSYTYSTLMDGLCKEGRIDE-------AVSLLDEMQIEGTFPNPFVFNVLIS--A 252
P+ T +++ G G + A+ +++ G V N LI A
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYA 418
Query: 253 LCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCV-- 310
CKK D RA + D++S K + VT+ ++ G + G NKA+ LL++M C
Sbjct: 419 KCKKVDTARA--MFDSLSPKE--RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTR 474
Query: 311 PNDVTFGTLVHGFVKQGRASDGASV-LISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
PN T + G + +L + + ++ + LI K G A
Sbjct: 475 PNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARL 534
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF 429
++ MM K N V +++L+ G G +EA EM+ G + T ++
Sbjct: 535 VFDNMMAK----NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACS 590
Query: 430 EAGDCHKAILVWKEMKNN-SCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
+G + + + MK + Y+ L++ L + G+L A+ + ++M +
Sbjct: 591 HSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVW 650
Query: 489 VAYSS--MIHG 497
VA+ S IHG
Sbjct: 651 VAFLSCCRIHG 661
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 156/343 (45%), Gaps = 6/343 (1%)
Query: 178 LVIKALCKVGLVDQAVEVFRGIH-LRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQI 236
L+ + L K Q +EVFR + R PD+ YS L+ + K+G+ A+ L EM+
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 237 EGTFPNPFVFNVLISALCKKGDLIRAAKLV----DNMS-LKGCVPNEVTYNTLVDGLCRK 291
G P+ V+N LI+A D +A + V D M ++ C PN VTYN L+ +
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQS 221
Query: 292 GKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIY 351
GK+++ +L + + P+ TF ++ + K G + +VL + + + +
Sbjct: 222 GKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281
Query: 352 SSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKN 411
+ LI K+ +FE Q +K +M +P ++++I + D+A +M +
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMND 341
Query: 412 KGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLME 471
++P+ TY ++ + G +A +++E+ + + ++ C+NG +E
Sbjct: 342 MNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIE 401
Query: 472 AMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
A ++ + + D Y + + A + +Q L +M
Sbjct: 402 ADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKM 444
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 159/366 (43%), Gaps = 15/366 (4%)
Query: 72 LIEKLAASSDFASLEELLQQMKRERRVFIEKN--FIVIFKAYGKAHFPEKAVNLFHRMEA 129
L E+L S + E+ + M+++R +I N + + GK A+ LF M+
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQR-WYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 130 EFHCKQTVKSFNSVLNVIIQEGHFHRALE-FYSHVCKSLNI---QPNGLTFNLVIKALCK 185
C+ +N+++ + +ALE ++ K I QPN +T+N++++A +
Sbjct: 162 S-GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQ 220
Query: 186 VGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFV 245
G VDQ +F+ + + +PD YT++ +MD K G I E ++L M+ P+
Sbjct: 221 SGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIIT 280
Query: 246 FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
FNVLI + KK + + + ++ P T+N+++ + ++KA + +M
Sbjct: 281 FNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMN 340
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE 365
+P+ +T+ ++ + G S + + E ++++ + G +
Sbjct: 341 DMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYI 400
Query: 366 HAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
A +L+ P+ Y L + ++ + + +M+ G +PN
Sbjct: 401 EADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNK------- 453
Query: 426 RGFFEA 431
R F EA
Sbjct: 454 RFFLEA 459
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 116/228 (50%), Gaps = 7/228 (3%)
Query: 340 EERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDG-LCREGK 398
++R + + +YS LIS + K+G+ AM L+ EM GC P+ VY+ALI L K
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 399 A---DEAREYLIEMKNKGH-LPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEV 454
A ++ R YL +MK PN TY+ L+R F ++G + ++K++ + + +
Sbjct: 185 AKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY 244
Query: 455 CYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
++ +++ KNG + E V +M S K D++ ++ +I + Q ++ + F +
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL 304
Query: 515 LCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
+ ++ +P + T+N ++ + + I +A V M D P FIT
Sbjct: 305 M--RSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 350
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 8/183 (4%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
++F LI+ +F +E+ + + R + F + YGKA +KA +F +
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGH---FHRALEFYSHVCKSLNIQPNGLTFNLVIKAL 183
M + + SF + +I+ G+ RA E + V +S + T N +++
Sbjct: 339 M----NDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVL-KASTLNAMLEVY 393
Query: 184 CKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNP 243
C+ GL +A ++F PD+ TY L K ++ L+ +M+ +G PN
Sbjct: 394 CRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNK 453
Query: 244 FVF 246
F
Sbjct: 454 RFF 456
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 156/343 (45%), Gaps = 6/343 (1%)
Query: 178 LVIKALCKVGLVDQAVEVFRGIH-LRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQI 236
L+ + L K Q +EVFR + R PD+ YS L+ + K+G+ A+ L EM+
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 237 EGTFPNPFVFNVLISALCKKGDLIRAAKLV----DNMS-LKGCVPNEVTYNTLVDGLCRK 291
G P+ V+N LI+A D +A + V D M ++ C PN VTYN L+ +
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQS 221
Query: 292 GKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIY 351
GK+++ +L + + P+ TF ++ + K G + +VL + + + +
Sbjct: 222 GKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281
Query: 352 SSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKN 411
+ LI K+ +FE Q +K +M +P ++++I + D+A +M +
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMND 341
Query: 412 KGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLME 471
++P+ TY ++ + G +A +++E+ + + ++ C+NG +E
Sbjct: 342 MNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIE 401
Query: 472 AMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
A ++ + + D Y + + A + +Q L +M
Sbjct: 402 ADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKM 444
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 159/366 (43%), Gaps = 15/366 (4%)
Query: 72 LIEKLAASSDFASLEELLQQMKRERRVFIEKN--FIVIFKAYGKAHFPEKAVNLFHRMEA 129
L E+L S + E+ + M+++R +I N + + GK A+ LF M+
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQR-WYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 130 EFHCKQTVKSFNSVLNVIIQEGHFHRALE-FYSHVCKSLNI---QPNGLTFNLVIKALCK 185
C+ +N+++ + +ALE ++ K I QPN +T+N++++A +
Sbjct: 162 S-GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQ 220
Query: 186 VGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFV 245
G VDQ +F+ + + +PD YT++ +MD K G I E ++L M+ P+
Sbjct: 221 SGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIIT 280
Query: 246 FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
FNVLI + KK + + + ++ P T+N+++ + ++KA + +M
Sbjct: 281 FNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMN 340
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE 365
+P+ +T+ ++ + G S + + E ++++ + G +
Sbjct: 341 DMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYI 400
Query: 366 HAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
A +L+ P+ Y L + ++ + + +M+ G +PN
Sbjct: 401 EADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNK------- 453
Query: 426 RGFFEA 431
R F EA
Sbjct: 454 RFFLEA 459
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 116/228 (50%), Gaps = 7/228 (3%)
Query: 340 EERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDG-LCREGK 398
++R + + +YS LIS + K+G+ AM L+ EM GC P+ VY+ALI L K
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 399 A---DEAREYLIEMKNKGH-LPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEV 454
A ++ R YL +MK PN TY+ L+R F ++G + ++K++ + + +
Sbjct: 185 AKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY 244
Query: 455 CYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
++ +++ KNG + E V +M S K D++ ++ +I + Q ++ + F +
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL 304
Query: 515 LCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
+ ++ +P + T+N ++ + + I +A V M D P FIT
Sbjct: 305 M--RSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 350
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 8/183 (4%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
++F LI+ +F +E+ + + R + F + YGKA +KA +F +
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQEGH---FHRALEFYSHVCKSLNIQPNGLTFNLVIKAL 183
M + + SF + +I+ G+ RA E + V +S + T N +++
Sbjct: 339 M----NDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVL-KASTLNAMLEVY 393
Query: 184 CKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNP 243
C+ GL +A ++F PD+ TY L K ++ L+ +M+ +G PN
Sbjct: 394 CRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNK 453
Query: 244 FVF 246
F
Sbjct: 454 RFF 456
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 118/553 (21%), Positives = 238/553 (43%), Gaps = 99/553 (17%)
Query: 71 SLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAE 130
SL++ S+F ++ +MK ER V + + Y + ++ + LF RM+ E
Sbjct: 133 SLVDTYMKGSNFKDGRKVFDEMK-ERNVV---TWTTLISGYARNSMNDEVLTLFMRMQNE 188
Query: 131 FHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGL-----TFNLVIKALCK 185
+ +F + L V+ +EG R L+ ++ V K NGL N +I K
Sbjct: 189 -GTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK------NGLDKTIPVSNSLINLYLK 241
Query: 186 VGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQI------EGT 239
G V +A +F +++ T+++++ G G EA+ + M++ E +
Sbjct: 242 CGNVRKARILFDKTEVKSVV----TWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESS 297
Query: 240 FPN------------------------PFVFN-----VLISALCKKGDLIRAAKLVDNMS 270
F + F+F+ L+ A K ++ A +L +
Sbjct: 298 FASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI- 356
Query: 271 LKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRAS 330
GCV N V++ ++ G + +AV L ++M PN+ T+ ++ +
Sbjct: 357 --GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE 414
Query: 331 DGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALI 390
A V+ + ER + + ++L+ K GK E A +++ + +K + V +SA++
Sbjct: 415 VHAQVVKTNYER----SSTVGTALLDAYVKLGKVEEAAKVFSGIDDK----DIVAWSAML 466
Query: 391 DGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM----------------RGF-----F 429
G + G+ + A + E+ G PN FT+SS++ GF
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRL 526
Query: 430 EAGDCHKAILVWKEMKNNSCNHNE-----------VCYSILINGLCKNGKLMEAMMVWKQ 478
++ C + L+ K + E V ++ +I+G ++G+ M+A+ V+K+
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKE 586
Query: 479 MLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQ 538
M R +K+D V + + +A LV++G K F+ M+ ++ ++ P + +++ + +
Sbjct: 587 MKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMV-RDCKIAPTKEHNSCMVDLYSRA 645
Query: 539 NNISRAMDVLNIM 551
+ +AM V+ M
Sbjct: 646 GQLEKAMKVIENM 658
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/460 (19%), Positives = 184/460 (40%), Gaps = 58/460 (12%)
Query: 63 KLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVN 122
+L + SF S+I+ A + E+L + + +F + + AY K A+
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 123 LFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKA 182
LF E C V S+ ++++ +Q A++ +S + K ++PN T+++++ A
Sbjct: 352 LFK----EIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM-KRKGVRPNEFTYSVILTA 406
Query: 183 L-------------------------------CKVGLVDQAVEVFRGIHLRNCAPDSYTY 211
L K+G V++A +VF GI + D +
Sbjct: 407 LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK----DIVAW 462
Query: 212 STLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSL 271
S ++ G + G + A+ + E+ G PN F F+ +++ + K ++
Sbjct: 463 SAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAI 522
Query: 272 KGCVPNEV-TYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRAS 330
K + + + + L+ +KG + A + + V++ +++ G+ + G+A
Sbjct: 523 KSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDL----VSWNSMISGYAQHGQAM 578
Query: 331 DGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCE--PNTVVYSA 388
V +++R + + + + + G E + + ++M + C+ P S
Sbjct: 579 KALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYF-DIMVRDCKIAPTKEHNSC 637
Query: 389 LIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNS 448
++D R G+ ++A MK ++PN S++ R A HK + +
Sbjct: 638 MVDLYSRAGQLEKA------MKVIENMPNP-AGSTIWRTILAACRVHKKTELGRLAAEKI 690
Query: 449 CN---HNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIK 485
+ Y +L N ++G E V K M R +K
Sbjct: 691 IAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVK 730
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 125/322 (38%), Gaps = 92/322 (28%)
Query: 352 SSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKN 411
+SL+ K F+ +++ EM E+ N V ++ LI G R DE + M+N
Sbjct: 132 TSLVDTYMKGSNFKDGRKVFDEMKER----NVVTWTTLISGYARNSMNDEVLTLFMRMQN 187
Query: 412 KGHLPNSFTYS-----------------------------------SLMRGFFEAGDCHK 436
+G PNSFT++ SL+ + + G+ K
Sbjct: 188 EGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRK 247
Query: 437 AILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI- 495
A +++ + + S V ++ +I+G NG +EA+ ++ M ++L +++S+I
Sbjct: 248 ARILFDKTEVKSV----VTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIK 303
Query: 496 --------------------HGF----------------CNAQLVDQGMKLFNQMLCQEA 519
+GF C A L ++LF ++ C
Sbjct: 304 LCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAML--DALRLFKEIGC--- 358
Query: 520 ELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQD 579
+V ++ +++ F Q + A+D+ + M +G P+ T + L L P
Sbjct: 359 --VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL-----PVIS 411
Query: 580 GREFLDELVVRLVKRQRTIGAS 601
E ++V +R T+G +
Sbjct: 412 PSEVHAQVVKTNYERSSTVGTA 433
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 142/305 (46%), Gaps = 36/305 (11%)
Query: 73 IEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFH 132
+ +LA F+ +E L++ K + ++ E + + ++YG+A A+ F +M+ ++
Sbjct: 74 VRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMD-QYG 132
Query: 133 CKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLN-IQPNGLTFNLVIKALCKVGLVDQ 191
++ SFN++LN + +F + + + + + N I P+ +++ ++IK+ C G ++
Sbjct: 133 TPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEK 192
Query: 192 AVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEA------------------------ 227
A+E+ R + + + ++T++ L K+G ++ A
Sbjct: 193 AIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIM 252
Query: 228 ----------VSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPN 277
L++EM G P+ +N L++A C++G L A K+ + + C PN
Sbjct: 253 SAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPN 312
Query: 278 EVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLI 337
T+ TL+ LC + ++ + V +P+ T LV G V+ + D ++
Sbjct: 313 AATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIR 372
Query: 338 SLEER 342
+++++
Sbjct: 373 TVKKK 377
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 140/293 (47%), Gaps = 5/293 (1%)
Query: 190 DQAVEVFRGIHLRNCAPDSYTYST--LMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFN 247
D+A++++ + + +P S Y+ + L K R + +L++ + + ++
Sbjct: 47 DKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYS 106
Query: 248 VLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA- 306
LI + + A + + M G + V++N L++ +K L +++
Sbjct: 107 TLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQR 166
Query: 307 -NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE 365
NK +P+ +++G L+ + G ++ ++ +G +++++S L+K+G+ E
Sbjct: 167 YNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELE 226
Query: 366 HAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
A LW EM++KGCE + Y+ I +E + +E + EM + G P++ +Y+ LM
Sbjct: 227 VADNLWNEMVKKGCELDNAAYNVRIMSAQKES-PERVKELIEEMSSMGLKPDTISYNYLM 285
Query: 426 RGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQ 478
+ E G +A V++ ++ N+C N + LI LC + + ++K+
Sbjct: 286 TAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKK 338
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 117/245 (47%), Gaps = 5/245 (2%)
Query: 320 VHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGC 379
V K R SD +++ S + E YS+LI + F HAM+ +++M + G
Sbjct: 74 VRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGT 133
Query: 380 EPNTVVYSALIDGLCREGKADEAREYLIEMKNKGH--LPNSFTYSSLMRGFFEAGDCHKA 437
+ V ++AL++ D+ + E+ + + +P+ +Y L++ + ++G KA
Sbjct: 134 PRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKA 193
Query: 438 ILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHG 497
I + ++M+ + ++ +++ L K G+L A +W +M+ +G +LD AY+ I
Sbjct: 194 IEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMS 253
Query: 498 FCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCD 557
+ ++ +L +M L+PD +YN L+ A+ ++ + A V + C
Sbjct: 254 -AQKESPERVKELIEEM--SSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCA 310
Query: 558 PDFIT 562
P+ T
Sbjct: 311 PNAAT 315
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 168/382 (43%), Gaps = 23/382 (6%)
Query: 156 ALEFYSHVCK-SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTL 214
AL+ Y VC SL + PN TF V+K+ K + ++ + C D Y +++L
Sbjct: 118 ALKLY--VCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSL 175
Query: 215 MDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGC 274
+ + GR+++A + D + + + LI +G + A KL D + +K
Sbjct: 176 ISMYVQNGRLEDAHKVFD----KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK-- 229
Query: 275 VPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGAS 334
+ V++N ++ G G +A+ L M+ P++ T T+V + G G
Sbjct: 230 --DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 287
Query: 335 VLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLC 394
V + +++ G N I ++LI K G+ E A L++ + K + + ++ LI G
Sbjct: 288 VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK----DVISWNTLIGGYT 343
Query: 395 REGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAG--DCHKAILVWKEMKNNSCNHN 452
EA EM G PN T S++ G D + I V+ + + +
Sbjct: 344 HMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNA 403
Query: 453 EVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFN 512
+ LI+ K G + A V+ +L + + ++++MI GF D LF+
Sbjct: 404 SSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS----SWNAMIFGFAMHGRADASFDLFS 459
Query: 513 QMLCQEAELQPDVATYNILLNA 534
+M ++ +QPD T+ LL+A
Sbjct: 460 RM--RKIGIQPDDITFVGLLSA 479
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 129/287 (44%), Gaps = 14/287 (4%)
Query: 276 PNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASV 335
PN + +NT+ G A+ L M++ +PN TF ++ K +G +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 336 LISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCR 395
+ + G + Y+++SLIS + G+ E A +++ +K + V Y+ALI G
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF----DKSPHRDVVSYTALIKGYAS 212
Query: 396 EGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVC 455
G + A++ E+ K + ++++++ G+ E G+ +A+ ++K+M + +E
Sbjct: 213 RGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDEST 268
Query: 456 YSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
+++ ++G + V + G ++ +++I + ++ LF ++
Sbjct: 269 MVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP 328
Query: 516 CQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
+ DV ++N L+ + N A+ + ML G P+ +T
Sbjct: 329 YK------DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 103/226 (45%), Gaps = 29/226 (12%)
Query: 343 GHRGNEYIYSSLISGLFKEGKFE---HAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKA 399
G Y S LI FE +A+ ++K + E PN ++++ + G
Sbjct: 60 GLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE----PNLLIWNTMFRGHALSSDP 115
Query: 400 DEAREYLIEMKNKGHLPNSFTYSSLM------RGFFEAGDCHKAILVWKEMKNNSCNHNE 453
A + + M + G LPNS+T+ ++ + F E H +L C+ +
Sbjct: 116 VSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL------KLGCDLDL 169
Query: 454 VCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQ 513
++ LI+ +NG+L +A V+ + R DVV+Y+++I G+ + ++ KLF++
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHR----DVVSYTALIKGYASRGYIENAQKLFDE 225
Query: 514 MLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
+ + DV ++N +++ + + N A+++ M+ PD
Sbjct: 226 IPVK------DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/404 (18%), Positives = 161/404 (39%), Gaps = 51/404 (12%)
Query: 192 AVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLIS 251
A+ VF+ I P+ ++T+ G A+ L M G PN + F ++
Sbjct: 87 AISVFKTIQ----EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLK 142
Query: 252 ALCKKGDLIRAAKLVDNMSLK-GCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCV 310
+ C K + + + LK GC + + +L+ + G+L A V +K
Sbjct: 143 S-CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDA-----HKVFDKSP 196
Query: 311 PND-VTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
D V++ L+ G+ +G + + + + + ++++ISG + G ++ A++
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALE 252
Query: 370 LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFF 429
L+K+MM+ P+ ++ + G + R+ + + + G N ++L+ +
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 430 EAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRG------ 483
+ G+ A +++ + + ++ LI G EA++++++ML G
Sbjct: 313 KCGELETACGLFERLPYKDV----ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDV 368
Query: 484 ---------IKLDVVAYSSMIHGFCNAQL--VDQGMKLFNQML-----CQEAE------- 520
L + IH + + +L V L ++ C + E
Sbjct: 369 TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN 428
Query: 521 --LQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
L ++++N ++ F + D+ + M G PD IT
Sbjct: 429 SILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDIT 472
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 146/392 (37%), Gaps = 61/392 (15%)
Query: 49 AEIFKSGSHKWGS-YKLG-DLSFY---SLIEKLAASSDFASLEELLQQMKRERRVFIEKN 103
++ FK G G KLG DL Y SLI + ++ + V +
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVV----S 202
Query: 104 FIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHV 163
+ + K Y + E A LF + + V S+N++++ + G++ ALE + +
Sbjct: 203 YTALIKGYASRGYIENAQKLFDEIPV-----KDVVSWNAMISGYAETGNYKEALELFKDM 257
Query: 164 CKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHL---------------------- 201
K+ N++P+ T V+ A + G ++E+ R +HL
Sbjct: 258 MKT-NVRPDESTMVTVVSACAQSG----SIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 202 -------------RNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNV 248
R D +++TL+ G EA+ L EM G PN
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 372
Query: 249 LISALCKKG--DLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA 306
++ A G D+ R + + LKG +L+D + G + A + N ++
Sbjct: 373 ILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILH 432
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEH 366
++ ++ GF GRA + + + G + ++ + L+S G +
Sbjct: 433 KSLS----SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDL 488
Query: 367 AMQLWKEMMEK-GCEPNTVVYSALIDGLCREG 397
+++ M + P Y +ID L G
Sbjct: 489 GRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG 520
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 182/421 (43%), Gaps = 48/421 (11%)
Query: 169 IQPNGLTFNLVIKALCKVGLVDQAV----EVFRGIHLRNCAPDSYT-------------- 210
I P+ +F +VIK+ + G++ QA+ F+ ++RN D Y
Sbjct: 102 IMPDAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQ 161
Query: 211 --------YSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRA 262
++ ++ G K G +EA L D M + V+I+ K DL A
Sbjct: 162 ISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVS----WTVMITGFAKVKDLENA 217
Query: 263 AKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHG 322
K D M K V ++N ++ G + G A+ L N M+ PN+ T+ ++
Sbjct: 218 RKYFDRMPEKSVV----SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISA 273
Query: 323 FVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPN 382
+ S S++ ++E+ R N ++ ++L+ K + A +++ E+ G + N
Sbjct: 274 CSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRN 330
Query: 383 TVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWK 442
V ++A+I G R G AR+ M + N +++SL+ G+ G AI ++
Sbjct: 331 LVTWNAMISGYTRIGDMSSARQLFDTMPKR----NVVSWNSLIAGYAHNGQAALAIEFFE 386
Query: 443 EMKN-NSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNA 501
+M + +EV +++ L + + IKL+ Y S+I +
Sbjct: 387 DMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARG 446
Query: 502 QLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFI 561
+ + ++F++M + DV +YN L AF + +++L+ M D+G +PD +
Sbjct: 447 GNLWEAKRVFDEMK------ERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRV 500
Query: 562 T 562
T
Sbjct: 501 T 501
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 157/354 (44%), Gaps = 26/354 (7%)
Query: 103 NFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSH 162
++ V+ + K E A F RM +++V S+N++L+ Q G AL ++
Sbjct: 200 SWTVMITGFAKVKDLENARKYFDRMP-----EKSVVSWNAMLSGYAQNGFTEDALRLFND 254
Query: 163 VCKSLNIQPNGLTFNLVIKA---LCKVGLVDQAVEVFRGIHLR-NCAPDSYTYSTLMDGL 218
+ + L ++PN T+ +VI A L V++ +R NC + + L+D
Sbjct: 255 MLR-LGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNC----FVKTALLDMH 309
Query: 219 CKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNE 278
K I A + +E+ GT N +N +IS + GD+ A +L D M + N
Sbjct: 310 AKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKR----NV 362
Query: 279 VTYNTLVDGLCRKGKLNKAVSLLNQMV-ANKCVPNDVTFGTLVHGFVKQGRASDGASVLI 337
V++N+L+ G G+ A+ M+ P++VT +++ G ++
Sbjct: 363 VSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVD 422
Query: 338 SLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREG 397
+ + + N+ Y SLI + G A +++ EM E+ + V Y+ L G
Sbjct: 423 YIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTAFAANG 478
Query: 398 KADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNH 451
E L +MK++G P+ TY+S++ AG + ++K ++N +H
Sbjct: 479 DGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRNPLADH 532
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 167/381 (43%), Gaps = 17/381 (4%)
Query: 50 EIFKSGSHKWGSYKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIE-KNFIVIF 108
E ++ S G Y S +++ L + F + ELL + KR+ R I + V+
Sbjct: 93 EFYRYASAIRGFYH-SSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVL 151
Query: 109 KAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLN 168
K + V F + + FN++L + QE A Y H K
Sbjct: 152 GRVAKLCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVY-HSLKH-Q 209
Query: 169 IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAV 228
QP+ TFN+++ + E +G L+ PD TY++L+D CK+ I++A
Sbjct: 210 FQPDLQTFNILLSGWKSSEEAEAFFEEMKGKGLK---PDVVTYNSLIDVYCKDREIEKAY 266
Query: 229 SLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGL 288
L+D+M+ E P+ + +I L G +A +++ M GC P+ YN +
Sbjct: 267 KLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNF 326
Query: 289 CRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNE 348
C +L A L+++MV PN T+ + + + GNE
Sbjct: 327 CIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRM-----LGNE 381
Query: 349 YIYSS-----LISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAR 403
+ ++ LI + K + AM+LW++M+ KG ++V L+D LC K +EA
Sbjct: 382 CLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAE 441
Query: 404 EYLIEMKNKGHLPNSFTYSSL 424
+ L+EM KGH P++ ++ +
Sbjct: 442 KCLLEMVEKGHRPSNVSFKRI 462
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 151/349 (43%), Gaps = 57/349 (16%)
Query: 138 KSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFR 197
+ F+ + ++I+ R+L I P T +V+ + K+ V Q VE F
Sbjct: 122 RKFDQIWELLIETKRKDRSL-----------ISPR--TMQVVLGRVAKLCSVRQTVESF- 167
Query: 198 GIHLRNCAPDSYT---YSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALC 254
+ PD + ++ L+ LC+E + +A ++ ++ + P+ FN+L+S
Sbjct: 168 -WKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQ-PDLQTFNILLSGW- 224
Query: 255 KKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDV 314
A + M KG P+ VTYN+L+D C+ ++ KA L+++M + P+ +
Sbjct: 225 --KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVI 282
Query: 315 TFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEM 374
T Y+++I GL G+ + A ++ KEM
Sbjct: 283 T-----------------------------------YTTVIGGLGLIGQPDKAREVLKEM 307
Query: 375 MEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDC 434
E GC P+ Y+A I C + +A + + EM KG PN+ TY+ R A D
Sbjct: 308 KEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDL 367
Query: 435 HKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRG 483
++ ++ M N C N LI ++ K+ AM +W+ M+ +G
Sbjct: 368 GRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 2/182 (1%)
Query: 374 MMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGD 433
M KG +P+ V Y++LID C++ + ++A + + +M+ + P+ TY++++ G G
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 434 CHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSS 493
KA V KEMK C + Y+ I C +L +A + +M+ +G+ + Y+
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 494 MIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLD 553
A + + +L+ +ML E P+ + L+ F + + AM + M+
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNEC--LPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVV 414
Query: 554 QG 555
+G
Sbjct: 415 KG 416
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 119/603 (19%), Positives = 246/603 (40%), Gaps = 65/603 (10%)
Query: 69 FYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAY--GKAHFP------EKA 120
F SLI + + D + LL +M R + ++F V+ ++ +AH EK
Sbjct: 531 FNSLIVRASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKW 590
Query: 121 VNLFHRMEAEFHCKQTVKSFNSVLNVIIQE---GHFHRALEFYSHVCKSLNIQPNGLTFN 177
L ++++ E LN ++QE F R + H ++ + +T+
Sbjct: 591 PKLAYQLDGE------------TLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYT 638
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
+I+ CK ++ + V+ N PD L + L ++G ++E V L + + I
Sbjct: 639 SLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFIS 698
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
+ + L G A +V + +GC+ + YN L+ GLC + K + A
Sbjct: 699 YPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAA 758
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
++L++M+ K +P + G+ + + RA+ + E+ + Y++ +LI G
Sbjct: 759 FAILDEMLDKKHIP---SLGSCLMLIPRLCRANKAGTAFNLAEQ---IDSSYVHYALIKG 812
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
L GK A + M+ G +Y+ + G C+ + E L M K + +
Sbjct: 813 LSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICS 872
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEV-CYSILINGLCKNGKLMEAMMVW 476
+Y +R AI + + + N V Y++LI + + +E V
Sbjct: 873 VKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVL 932
Query: 477 KQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFY 536
+M RG+ D ++ ++HG+ ++ ++ + M+ + ++P+ + + ++
Sbjct: 933 LEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISK--GMKPNNRSLRAVTSSLC 990
Query: 537 QQNNISRAMDVLNIMLDQGCD-----------------------PDFITCDIFLKTLRDN 573
++ +A+D+ +M +G + DF+T + R+
Sbjct: 991 DNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLT-----RVTRNG 1045
Query: 574 MNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIR 633
M P D ++ +L R A ++ ML +P +S++ V+ L + +
Sbjct: 1046 MMAPN-----YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLD 1100
Query: 634 KAI 636
KA+
Sbjct: 1101 KAM 1103
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/504 (21%), Positives = 206/504 (40%), Gaps = 59/504 (11%)
Query: 97 RVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRA 156
R+F+EK ++ F AH ++ R+E E C + +N ++ + E A
Sbjct: 708 RIFVEKLTVLGFSCI--AH------SVVKRLEGE-GCIVEQEVYNHLIKGLCTEKKDSAA 758
Query: 157 LEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMD 216
+ +I G ++I LC+ A + I SY + L+
Sbjct: 759 FAILDEMLDKKHIPSLGSCL-MLIPRLCRANKAGTAFNLAEQI------DSSYVHYALIK 811
Query: 217 GLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVP 276
GL G++ +A + L M G ++NV+ CK + ++ +++ M K +
Sbjct: 812 GLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIIC 871
Query: 277 NEVTYNTLVDGLCRKGKLNKAVSL------------------------------------ 300
+ +Y V +C + + A+SL
Sbjct: 872 SVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKV 931
Query: 301 LNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFK 360
L +M +P++ TF LVHG+ S L ++ +G + N ++ S L
Sbjct: 932 LLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCD 991
Query: 361 EGKFEHAMQLWKEMMEKGCE-PNTVVYSALIDGLCREGKADEAREYLIEMKNKGHL-PNS 418
G + A+ LW+ M KG ++VV + +++ L +G+ +A ++L + G + PN
Sbjct: 992 NGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPN- 1050
Query: 419 FTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQ 478
Y ++++ + G+ A+ + M N Y +INGL + +L +AM +
Sbjct: 1051 --YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTE 1108
Query: 479 MLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQ 538
M+ G+ + +S ++H FC A V + +L M+ P + +++ F +
Sbjct: 1109 MVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGE--SPSQEMFKTVIDRFRVE 1166
Query: 539 NNISRAMDVLNIMLDQGCDPDFIT 562
N +A +++ +M G + DF T
Sbjct: 1167 KNTVKASEMMEMMQKCGYEVDFET 1190
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/471 (21%), Positives = 180/471 (38%), Gaps = 77/471 (16%)
Query: 218 LCKEGRIDEAVSLLDEMQIEG-TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVP 276
L +EG + E LL EM+ G T N +F LI D +A L D M KG VP
Sbjct: 157 LIREGMVKEVELLLMEMERHGDTMVNEGIFCDLIGKYVDDFDSRKAVMLFDWMRRKGLVP 216
Query: 277 NEVTYNTLVDGL--------------------------------------CRKGKLNKAV 298
Y L+D L C K+ +A
Sbjct: 217 LTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVIELLCLDQKVQEAR 276
Query: 299 SLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGL 358
L ++VA C+ N + + G+ ++ D +L + E + + ++ + ++ L
Sbjct: 277 VLARKLVALGCILNSSIYSKITIGYNEK---QDFEDLLSFIGEVKYEPDVFVGNRILHSL 333
Query: 359 FKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNS 418
+ E A +E+ G + + V + LI C EG A YL E+ +KG+ P+
Sbjct: 334 CRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDV 393
Query: 419 FTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQ 478
++Y++++ G F G + EMK N + + I++ G CK + EA + +
Sbjct: 394 YSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNK 453
Query: 479 MLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLF--NQMLCQEAELQPDVATYNILLNAFY 536
M G+ + F ++L N +AE D+ N Y
Sbjct: 454 MFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEFFDDLG------NGLY 507
Query: 537 QQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQR 596
++ +N++LD+ P+F + L+VR +
Sbjct: 508 LHTDLDAYEQRVNMVLDRSVLPEF------------------------NSLIVRASEDGD 543
Query: 597 TIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPR-NIRKAIS--ECWSRLC 644
A ++++ M ++A++++ LC R ++R +IS E W +L
Sbjct: 544 LQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLA 594
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/471 (19%), Positives = 188/471 (39%), Gaps = 53/471 (11%)
Query: 206 PDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKL 265
PD + + ++ LC+ + A ++E++ G + F +LI C +GD+ RA
Sbjct: 321 PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLY 380
Query: 266 VDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLV----- 320
+ + KG P+ +YN ++ GL RKG +L++M N + + TF +V
Sbjct: 381 LSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCK 440
Query: 321 ----------------HGFVKQGRASDGASVLIS------LEERGHRGNEYIYS------ 352
+G ++ + D S S L R R N+ +S
Sbjct: 441 ARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEFFD 500
Query: 353 SLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNK 412
L +GL+ + Q ++++ P +++LI +G A L EM
Sbjct: 501 DLGNGLYLHTDLDAYEQRVNMVLDRSVLPE---FNSLIVRASEDGDLQTALRLLDEMARW 557
Query: 413 GHLPNSFTYSSLMRGFFEA-GDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLME 471
G + +++ LMR + +I + ++ + + + L+ CK G
Sbjct: 558 GQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFSRH 617
Query: 472 AMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNIL 531
+ +++ +M+ +D V Y+S+I FC + ++ + ++ Q PD+ L
Sbjct: 618 SKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGA--AQNDNWLPDLNDCGDL 675
Query: 532 LNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLR--------DNMNPPQDG--- 580
N ++ + + + + C IF++ L ++ +G
Sbjct: 676 WNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEGC 735
Query: 581 ---REFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCK 628
+E + L+ L ++ A I++ MLD+ +P + +++ +LC+
Sbjct: 736 IVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCR 786
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 116/278 (41%), Gaps = 3/278 (1%)
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
E +L EMQ G P+ FN L+ D + + + M KG PN + +
Sbjct: 927 EVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVT 986
Query: 286 DGLCRKGKLNKAVSLLNQMVANKC-VPNDVTFGTLVHGFVKQGRASDGASVLISLEERGH 344
LC G + KA+ L M + + + V +V + +G L + G
Sbjct: 987 SSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGM 1046
Query: 345 RGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE 404
Y ++I L G + A+ L M++ P + Y ++I+GL R + D+A +
Sbjct: 1047 MAPNY--DNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMD 1104
Query: 405 YLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLC 464
+ EM G P+ T+S L+ F EA ++ + K M + ++ + +I+
Sbjct: 1105 FHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFR 1164
Query: 465 KNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQ 502
++A + + M G ++D + S+I +++
Sbjct: 1165 VEKNTVKASEMMEMMQKCGYEVDFETHWSLISNMSSSK 1202
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 121/260 (46%), Gaps = 10/260 (3%)
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYST-LMDGLCKEGRI 224
S ++PN + V +LC G V +A+++++ + + S T +++ L +G I
Sbjct: 972 SKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEI 1031
Query: 225 DEAVSLLDEMQIEGTF-PNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNT 283
+A L + G PN ++ +I L +G+L A L++ M +P +Y++
Sbjct: 1032 PKAEDFLTRVTRNGMMAPN---YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDS 1088
Query: 284 LVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERG 343
+++GL R +L+KA+ +MV P+ T+ LVH F + + + ++ S+ G
Sbjct: 1089 VINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLG 1148
Query: 344 HRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGL--CREGKADE 401
++ ++ ++I E A ++ + M + G E + + +LI + +E K
Sbjct: 1149 ESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWSLISNMSSSKEKKTTT 1208
Query: 402 AREYLIEMKNKGHLPNSFTY 421
A E + G N FT+
Sbjct: 1209 AGEGFLSRLLSG---NGFTW 1225
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 179/386 (46%), Gaps = 35/386 (9%)
Query: 98 VFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRAL 157
V+++ + ++ G +KA + + K TV S+NS+L+ ++ G A
Sbjct: 139 VYVQTGLVGLYSRLGYIELAKKAFD-------DIAEKNTV-SWNSLLHGYLESGELDEAR 190
Query: 158 EFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDG 217
+ + + + +++NL+I + K G + A +F + L++ A +++ L+ G
Sbjct: 191 RVFDKIP-----EKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPA----SWNILIGG 241
Query: 218 L--CKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCV 275
C+E ++ A + D M + N + +IS K GD+ A +L MS K
Sbjct: 242 YVNCREMKL--ARTYFDAMPQK----NGVSWITMISGYTKLGDVQSAEELFRLMSKK--- 292
Query: 276 PNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCV--PNDVTFGTLVHGFVKQGRASDGA 333
+++ Y+ ++ + GK A+ L QM+ P+++T ++V + G S G
Sbjct: 293 -DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGT 351
Query: 334 SVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGL 393
V + E G + ++ + +SLI K G F A +++ + +K +TV YSA+I G
Sbjct: 352 WVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKK----DTVSYSAMIMGC 407
Query: 394 CREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNE 453
G A EA M K PN T++ L+ + +G + + MK+++ +
Sbjct: 408 GINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSA 467
Query: 454 VCYSILINGLCKNGKLMEAMMVWKQM 479
Y I+++ L + G+L EA + K M
Sbjct: 468 DHYGIMVDMLGRAGRLEEAYELIKSM 493
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 162/424 (38%), Gaps = 98/424 (23%)
Query: 207 DSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV 266
DS+++ L+ L + + E V + +M G P+ ++ A C K + + K +
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRA-CGKMENMVDGKPI 126
Query: 267 DNMSLK----GCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHG 322
+LK GCV LV R G + A + +A K N V++ +L+HG
Sbjct: 127 HAQALKNGLCGCV---YVQTGLVGLYSRLGYIELAKKAFDD-IAEK---NTVSWNSLLHG 179
Query: 323 FVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPN 382
+++ G + V + E+ + ++ +IS K+G +A L+ M K
Sbjct: 180 YLESGELDEARRVFDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASW 235
Query: 383 TVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWK 442
++ ++ CRE K AR Y M K N ++ +++ G+ + GD A +++
Sbjct: 236 NILIGGYVN--CREMKL--ARTYFDAMPQK----NGVSWITMISGYTKLGDVQSAEELFR 287
Query: 443 EMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSR-------------------- 482
M +++ Y +I +NGK +A+ ++ QML R
Sbjct: 288 LMSKK----DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQ 343
Query: 483 -----------------GIKLDV-------------------------------VAYSSM 494
GIK+D V+YS+M
Sbjct: 344 LGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAM 403
Query: 495 IHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQ 554
I G + + LF M+ E ++ P+V T+ LL+A+ + N M D
Sbjct: 404 IMGCGINGMATEANSLFTAMI--EKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDH 461
Query: 555 GCDP 558
+P
Sbjct: 462 NLEP 465
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 91/157 (57%), Gaps = 11/157 (7%)
Query: 404 EYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGL 463
E EM +G + N+ TY++L++G F+AGDC A ++KEM ++ + + Y+IL++GL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 464 CKNGKLMEAMMVWK---------QMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
CKNGKL +A++ K + +G+K +VV Y++MI GFC ++ LF +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 515 LCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIM 551
+E PD TYN L+ A + + + + +++ M
Sbjct: 122 --KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 10/184 (5%)
Query: 193 VEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISA 252
+E+FR + R ++ TY+TL+ GL + G D A + EM +G P+ +N+L+
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 253 LCKKGDL---IRAAKLVD------NMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQ 303
LCK G L + A K+ D ++SLKG PN VTY T++ G C+KG +A +L +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 304 MVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGK 363
M + +P+ T+ TL+ ++ G + A ++ + G+ Y L++ + +G+
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGR 179
Query: 364 FEHA 367
+
Sbjct: 180 LDKG 183
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 26/195 (13%)
Query: 228 VSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDG 287
+ L EM G N + LI L + GD A ++ M G P+ +TYN L+DG
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 288 LCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGN 347
LC+ GKL KA +VA G+ DG + SL +G + N
Sbjct: 61 LCKNGKLEKA------LVA--------------------GKVEDGWDLFCSLSLKGVKPN 94
Query: 348 EYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLI 407
Y+++ISG K+G E A L+++M E G P++ Y+ LI R+G + E +
Sbjct: 95 VVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIK 154
Query: 408 EMKNKGHLPNSFTYS 422
EM++ ++ TY
Sbjct: 155 EMRSCRFAGDASTYG 169
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 12/170 (7%)
Query: 339 LEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGK 398
+ +RG GN Y++LI GLF+ G + A +++KEM+ G P+ + Y+ L+DGLC+ GK
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 399 ADEAR---------EYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSC 449
++A + + KG PN TY++++ GF + G +A ++++MK +
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 450 NHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAY---SSMIH 496
+ Y+ LI ++G + + K+M S D Y + M+H
Sbjct: 127 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLH 176
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 94/186 (50%), Gaps = 12/186 (6%)
Query: 121 VNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVI 180
+ LF M TV ++ +++ + Q G A E + + S + P+ +T+N+++
Sbjct: 1 MELFREMSQRGLVGNTV-TYTTLIQGLFQAGDCDMAQEIFKEMV-SDGVPPDIMTYNILL 58
Query: 181 KALCKVGLVDQAV---------EVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLL 231
LCK G +++A+ ++F + L+ P+ TY+T++ G CK+G +EA +L
Sbjct: 59 DGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLF 118
Query: 232 DEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRK 291
+M+ +G P+ +N LI A + GD +A+L+ M + TY + D +
Sbjct: 119 RKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHD 177
Query: 292 GKLNKA 297
G+L+K
Sbjct: 178 GRLDKG 183
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 368 MQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRG 427
M+L++EM ++G NTV Y+ LI GL + G D A+E EM + G P+ TY+ L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 428 FFEAGDCHKAILVWK---------EMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQ 478
+ G KA++ K + N V Y+ +I+G CK G EA ++++
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 479 MLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQ 537
M G D Y+++I +L +M + D +TY ++ + +
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM--RSCRFAGDASTYGLVTDMLHD 177
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 440 VWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFC 499
+++EM N V Y+ LI GL + G A ++K+M+S G+ D++ Y+ ++ G C
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 500 -NAQL--------VDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNI 550
N +L V+ G LF + + ++P+V TY +++ F ++ A +
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKG--VKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 551 MLDQGCDPDFITCDIFLKT-LRDN 573
M + G PD T + ++ LRD
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDG 144
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 115/216 (53%), Gaps = 7/216 (3%)
Query: 112 GKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQ- 170
G+ +A +++++M K ++++ +L+ +++ + Y H +SL Q
Sbjct: 155 GRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQM 214
Query: 171 ------PNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRI 224
P+ N++IKA K VD+A+ VF+ + L P++YTYS L+ G+C++GR+
Sbjct: 215 KSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRV 274
Query: 225 DEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTL 284
+ + EMQ++G PN + VLI +L + L A ++V +M P+ +TYNT+
Sbjct: 275 GQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTV 334
Query: 285 VDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLV 320
+ LCR G+ ++A+ ++ + V + + TL+
Sbjct: 335 LTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLM 370
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 119/236 (50%), Gaps = 9/236 (3%)
Query: 133 CKQTVKSFNSVLNVII-QEGHFHRALEFYSHVCKSLNIQPNGLTFNLVI----KALCKVG 187
C+ +V +N ++ ++ F+RA + Y+ + +S + +P+ T+ L++ K K+
Sbjct: 139 CEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLN 198
Query: 188 LVDQAVEVFRGIHLR----NCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNP 243
+ + R + + PD++ + ++ K +DEA+ + EM + G+ PN
Sbjct: 199 VCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNA 258
Query: 244 FVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQ 303
+ ++ L+ +C+KG + + M +KG VPN Y L+ L + +L++AV ++
Sbjct: 259 YTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYD 318
Query: 304 MVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
M+AN P+ +T+ T++ + GR S+ ++ ++R E Y +L+ ++
Sbjct: 319 MLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMDEVY 374
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 45/260 (17%)
Query: 176 FNLVIKALC-KVGLVDQAVEVF-RGIHLRNCAPDSYTYSTLMDGLCKEGR--------ID 225
+N +I+ C + L ++A +V+ + + + PD TY+ L+ L K +
Sbjct: 146 YNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLH 205
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
SL +M+ G P+ FV N++I A K ++ A ++ M+L G PN TY+ LV
Sbjct: 206 AVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLV 265
Query: 286 DGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR 345
G+C KG++ + + +M VPN G+ ++
Sbjct: 266 KGVCEKGRVGQGLGFYKEMQVKGMVPN-------------------GSCYMV-------- 298
Query: 346 GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREY 405
LI L E + + A+++ +M+ P+ + Y+ ++ LCR G+ EA E
Sbjct: 299 --------LICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEM 350
Query: 406 LIEMKNKGHLPNSFTYSSLM 425
+ E K + + Y +LM
Sbjct: 351 VEEWKKRDPVMGERNYRTLM 370
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 130/305 (42%), Gaps = 12/305 (3%)
Query: 168 NIQPNGLTFNLVIKALCKVGLVDQAVEVFR-GIHLRNCAPDSYTYSTLMDGLCKEGRIDE 226
N++P G T + V+ AL D A+++FR R + Y T++ R +
Sbjct: 68 NLKP-GFTNSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNF 126
Query: 227 AVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKG--CVPNEVTYNTL 284
+L++E+ + ++N +I C + L A V N L+ P+ TY L
Sbjct: 127 VETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLL 186
Query: 285 VDGLCRK-GKLN-------KAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVL 336
+ L ++ KLN SL QM +N +P+ ++ + K + V
Sbjct: 187 LSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVF 246
Query: 337 ISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCRE 396
+ G N Y YS L+ G+ ++G+ + +KEM KG PN Y LI L E
Sbjct: 247 KEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSME 306
Query: 397 GKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCY 456
+ DEA E + +M P+ TY++++ G +A+ + +E K E Y
Sbjct: 307 RRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNY 366
Query: 457 SILIN 461
L++
Sbjct: 367 RTLMD 371
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 1/151 (0%)
Query: 364 FEHAMQ-LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYS 422
+ HA++ L K+M G P+T V + +I + + DEA EM G PN++TYS
Sbjct: 203 YLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYS 262
Query: 423 SLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSR 482
L++G E G + + +KEM+ N CY +LI L +L EA+ V ML+
Sbjct: 263 YLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLAN 322
Query: 483 GIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQ 513
+ D++ Y++++ C + +++ +
Sbjct: 323 SLSPDMLTYNTVLTELCRGGRGSEALEMVEE 353
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 110/227 (48%), Gaps = 13/227 (5%)
Query: 265 LVDNMSLKGCVPNEVTYNTLVDGLC-RKGKLNKAVSLLNQMV-ANKCVPNDVTFGTLVHG 322
L++ + C + YN ++ C RK N+A + N+M+ ++ P+ T+ L+
Sbjct: 130 LIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSS 189
Query: 323 FVKQGRASDGASVLI--------SLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEM 374
+K+ + V + ++ G + ++ + +I K + + A++++KEM
Sbjct: 190 LLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEM 249
Query: 375 MEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDC 434
G EPN YS L+ G+C +G+ + + EM+ KG +PN Y L+
Sbjct: 250 ALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRL 309
Query: 435 HKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAM-MV--WKQ 478
+A+ V +M NS + + + Y+ ++ LC+ G+ EA+ MV WK+
Sbjct: 310 DEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKK 356
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 408 EMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNG 467
+MK+ G +P++F + +++ + + + +AI V+KEM N YS L+ G+C+ G
Sbjct: 213 QMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKG 272
Query: 468 KLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVAT 527
++ + + +K+M +G+ + Y +I + +D+ +++ ML L PD+ T
Sbjct: 273 RVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLAN--SLSPDMLT 330
Query: 528 YNILLNAFYQQNNISRAMDVL 548
YN +L + S A++++
Sbjct: 331 YNTVLTELCRGGRGSEALEMV 351
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 179/365 (49%), Gaps = 9/365 (2%)
Query: 120 AVNLF-HRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNL 178
AV ++ H+ME++ + S +++++ G F A + Y ++ KS + + + F++
Sbjct: 542 AVKIYNHKMESDEEINLHITS--TMIDIYTVMGEFSEAEKLYLNL-KSSGVVLDRIGFSI 598
Query: 179 VIKALCKVGLVDQAVEVFRGI-HLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
V++ K G +++A V + ++ PD Y + ++ K D+ L ++
Sbjct: 599 VVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKS 658
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G N ++N +I+ + L + + M G PN VT+N L+D + K KL K
Sbjct: 659 GIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLD-VYGKAKLFKK 717
Query: 298 VSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
V+ L + V + +++ T++ + K ++ +S + +++ G + Y++L+
Sbjct: 718 VNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDA 777
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
K+ + E + K M + P+ Y+ +I+ +G DE + L E+K G P+
Sbjct: 778 YGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPD 837
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMM--V 475
+Y++L++ + G +A+ + KEM+ + ++V Y+ L+ L +N + +EA+ +
Sbjct: 838 LCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSL 897
Query: 476 W-KQM 479
W KQM
Sbjct: 898 WMKQM 902
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 185/395 (46%), Gaps = 5/395 (1%)
Query: 156 ALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSY-TYSTL 214
A++F+ + + + N + ++L+++ L + D+A ++ + + + SY ++T+
Sbjct: 157 AIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTV 216
Query: 215 MDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGC 274
+ K+G + A M G PN +L+ K ++ A +M G
Sbjct: 217 IYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGI 276
Query: 275 VPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGAS 334
V E Y++++ R +KA +++ M ++ + +++ + +QG+ S
Sbjct: 277 VC-ESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAES 335
Query: 335 VLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLC 394
+L+S+E G N Y++LI+G K K E A L+ + G EP+ Y ++I+G
Sbjct: 336 ILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWG 395
Query: 395 REGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEV 454
R +EA+ Y E+K G+ PNSF +L+ + GD AI ++M C ++ +
Sbjct: 396 RADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSI 455
Query: 455 CYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
I++ K GK+ V K I+L+ ++SS++ + +VD + L +
Sbjct: 456 L-GIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREK 514
Query: 515 LCQEAELQPDVATYNILLNAFYQQNNISRAMDVLN 549
+++ + + Y++L+ + + ++ A+ + N
Sbjct: 515 KWRDSAFESHL--YHLLICSCKESGQLTDAVKIYN 547
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 116/539 (21%), Positives = 240/539 (44%), Gaps = 33/539 (6%)
Query: 101 EKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFN--SVLNVIIQEGHFHRALE 158
E ++ + + +G+A E+A + + ++ C SFN +++N+ + G A++
Sbjct: 384 ETSYRSMIEGWGRADNYEEAKHYYQELK---RCGYKPNSFNLFTLINLQAKYGDRDGAIK 440
Query: 159 FYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGL 218
+ + Q + + ++++A KVG +D V +G + + ++S+L+
Sbjct: 441 TIEDMT-GIGCQYSSI-LGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAY 498
Query: 219 CKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNE 278
K G +D+ + LL E + + ++++LI + + G L A K+ ++ N
Sbjct: 499 VKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINL 558
Query: 279 VTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVL-I 337
+T++D G+ ++A L + ++ V + + F +V +VK G + SVL I
Sbjct: 559 HITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEI 618
Query: 338 SLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ-LWKEMMEKGCEPNTVVYSALIDGLCRE 396
E++ + Y++ ++ ++++ + +Q L+ + + G N +Y+ +I+ R
Sbjct: 619 MDEQKDIVPDVYLFRDMLR-IYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARA 677
Query: 397 GKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCY 456
DE EM G PN+ T++ L+ + +A K ++ K + + + Y
Sbjct: 678 LPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISY 736
Query: 457 SILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML- 515
+ +I KN K M G + + AY++++ + D+ M+ F +L
Sbjct: 737 NTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGK----DKQMEKFRSILK 792
Query: 516 -CQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNM 574
+++ PD TYNI++N + +Q I DVL + + G PD + + +K
Sbjct: 793 RMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAY---- 848
Query: 575 NPPQDGREFLDELVVRLVK--RQRTIGASKIIEVMLDRCL-----LPEASTWAIVVQQL 626
G + E V LVK R R I K+ L L EA W++ ++Q+
Sbjct: 849 -----GIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQM 902
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/536 (19%), Positives = 221/536 (41%), Gaps = 58/536 (10%)
Query: 94 RERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHF 153
R+ + E + + Y + +KA + M+ + + ++++ +LN Q+G
Sbjct: 272 RKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQD-RVRLKLENWLVMLNAYSQQGKM 330
Query: 154 HRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYST 213
A + ++ PN + +N +I K+ ++ A +F + PD +Y +
Sbjct: 331 ELAESILVSM-EAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRS 389
Query: 214 LMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKG 273
+++G + +EA E++ G PN F LI+ K GD A K +++M+ G
Sbjct: 390 MIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIG 449
Query: 274 CVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGA 333
C + + ++ + GK++ +L N N +F +LV +VK G D
Sbjct: 450 CQYSSIL-GIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCL 508
Query: 334 SVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGL 393
+L + R ++Y LI + G+ A++++ ME E N + S +ID
Sbjct: 509 GLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIY 568
Query: 394 CREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKA---------------- 437
G+ EA + + +K+ G + + +S ++R + +AG +A
Sbjct: 569 TVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPD 628
Query: 438 ILVWKEM--------------------KNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
+ ++++M + + + N+ Y+ +IN + L E ++
Sbjct: 629 VYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFE 688
Query: 478 QMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAF-- 535
+M+ G + V ++ ++ + A+L + +LF L + DV +YN ++ A+
Sbjct: 689 EMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELF---LLAKRHGVVDVISYNTIIAAYGK 745
Query: 536 -------------YQQNNISRAMDVLNIMLDQ-GCDPDFITCDIFLKTLRDNMNPP 577
Q + S +++ N +LD G D LK ++ + + P
Sbjct: 746 NKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGP 801
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 148/343 (43%), Gaps = 2/343 (0%)
Query: 71 SLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAE 130
++I+ +F+ E+L +K V F ++ + Y KA E+A ++ M+ +
Sbjct: 563 TMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQ 622
Query: 131 FHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVD 190
V F +L I Q+ L+ + + I N +N VI + +D
Sbjct: 623 KDIVPDVYLFRDMLR-IYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLD 681
Query: 191 QAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLI 250
+ F + P++ T++ L+D K + L + G + +N +I
Sbjct: 682 ELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTII 740
Query: 251 SALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCV 310
+A K D + + NM G + YNTL+D + ++ K S+L +M +
Sbjct: 741 AAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSG 800
Query: 311 PNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQL 370
P+ T+ +++ + +QG + A VL L+E G + Y++LI G E A+ L
Sbjct: 801 PDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGL 860
Query: 371 WKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKG 413
KEM + P+ V Y+ L+ L R + EA ++ + MK G
Sbjct: 861 VKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMG 903
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 183/417 (43%), Gaps = 65/417 (15%)
Query: 140 FNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVF--- 196
+N++ + H R+LE Y + + ++ P+ T++ ++KA ++++
Sbjct: 839 YNALFKGFVTCSHPIRSLELYVRMLRD-SVSPSSYTYSSLVKASSFASRFGESLQAHIWK 897
Query: 197 --RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALC 254
G H++ +TL+D GRI EA + DEM + + ++SA
Sbjct: 898 FGFGFHVK-------IQTTLIDFYSATGRIREARKVFDEMPER----DDIAWTTMVSAYR 946
Query: 255 KKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDV 314
+ D+ A L + MS K NE T N L++G G L +A SL NQM V + +
Sbjct: 947 RVLDMDSANSLANQMSEK----NEATSNCLINGYMGLGNLEQAESLFNQM----PVKDII 998
Query: 315 TFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEM 374
++ T++ G+ + R + A+ ++ +M
Sbjct: 999 SWTTMIKGYSQNKR-----------------------------------YREAIAVFYKM 1023
Query: 375 MEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDC 434
ME+G P+ V S +I G + +E + G + + + S+L+ + + G
Sbjct: 1024 MEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSL 1083
Query: 435 HKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSM 494
+A+LV+ + N C++ +I GL +G EA+ ++ +M +K + V + S+
Sbjct: 1084 ERALLVFFNLPKK----NLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSV 1139
Query: 495 IHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIM 551
+A LVD+G +++ M+ + + +V Y +++ F + I A++++ M
Sbjct: 1140 FTACTHAGLVDEGRRIYRSMI-DDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNM 1195
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 40/258 (15%)
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVS 229
+ N T N +I +G ++QA +F + ++ D +++T++ G + R EA++
Sbjct: 963 EKNEATSNCLINGYMGLGNLEQAESLFNQMPVK----DIISWTTMIKGYSQNKRYREAIA 1018
Query: 230 LLDEMQIEGTFPNPFVFNVLISALCKKG-------------------DLIRAAKLVDNMS 270
+ +M EG P+ + +ISA G D+ + LVD S
Sbjct: 1019 VFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYS 1078
Query: 271 LKGCVP------------NEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
G + N +N++++GL G +A+ + +M PN VTF +
Sbjct: 1079 KCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVS 1138
Query: 319 LVHGFVKQGRASDGASVLISL-EERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEK 377
+ G +G + S+ ++ N Y ++ K G A++L M
Sbjct: 1139 VFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNM--- 1195
Query: 378 GCEPNTVVYSALIDGLCR 395
EPN V++ AL+DG CR
Sbjct: 1196 EFEPNAVIWGALLDG-CR 1212
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 161/378 (42%), Gaps = 59/378 (15%)
Query: 177 NLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQI 236
N +I + G VD A VF G+ L+ D ++ ++ GL K EA+ L +M +
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLK----DHSSWVAMISGLSKNECEAEAIRLFCDMYV 281
Query: 237 EGTFPNPFVFNVLISALCKK------------------------------------GDLI 260
G P P+ F+ ++SA CKK G+LI
Sbjct: 282 LGIMPTPYAFSSVLSA-CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLI 340
Query: 261 RAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLV 320
A + NMS + + VTYNTL++GL + G KA+ L +M + P+ T +LV
Sbjct: 341 SAEHIFSNMSQR----DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 396
Query: 321 HGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCE 380
G G + + G N I +L++ K E A+ + +E E
Sbjct: 397 VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF---LETEVE 453
Query: 381 PNTVVYSALIDGLCREGKADEAR---EYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKA 437
N V+++ + L G D+ R +M+ + +PN +TY S+++ GD
Sbjct: 454 -NVVLWNVM---LVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509
Query: 438 ILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHG 497
+ ++ + N S+LI+ K GKL A W +L R DVV++++MI G
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA---W-DILIRFAGKDVVSWTTMIAG 565
Query: 498 FCNAQLVDQGMKLFNQML 515
+ D+ + F QML
Sbjct: 566 YTQYNFDDKALTTFRQML 583
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/494 (17%), Positives = 199/494 (40%), Gaps = 97/494 (19%)
Query: 141 NSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIH 200
N+++++ G+ A +S++ Q + +T+N +I L + G ++A+E+F+ +H
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMS-----QRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 201 LRNCAPDSYTYSTLM-----DGLCKEGR------------------------------ID 225
L PDS T ++L+ DG G+ I+
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 441
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
A+ E ++E N ++NV++ A DL + ++ M ++ VPN+ TY +++
Sbjct: 442 TALDYFLETEVE----NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 497
Query: 286 DGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR 345
R G L + +Q++ N L+ + K G+ +LI
Sbjct: 498 KTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA----- 552
Query: 346 GNEYI-YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTV-------------------- 384
G + + ++++I+G + + A+ +++M+++G + V
Sbjct: 553 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ 612
Query: 385 ---------------VYSALIDGLCREGKADEAREYL-IEMKNKGHLPNSFTYSSLMRGF 428
+AL+ R GK +E+ YL E G ++ +++L+ GF
Sbjct: 613 IHAQACVSGFSSDLPFQNALVTLYSRCGKIEES--YLAFEQTEAG---DNIAWNALVSGF 667
Query: 429 FEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV 488
++G+ +A+ V+ M ++N + + + + + V + G +
Sbjct: 668 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 727
Query: 489 VAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVL 548
+++I + + K F ++ + + ++N ++NA+ + S A+D
Sbjct: 728 EVCNALISMYAKCGSISDAEKQFLEVSTK------NEVSWNAIINAYSKHGFGSEALDSF 781
Query: 549 NIMLDQGCDPDFIT 562
+ M+ P+ +T
Sbjct: 782 DQMIHSNVRPNHVT 795
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 97/463 (20%), Positives = 183/463 (39%), Gaps = 50/463 (10%)
Query: 106 VIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCK 165
V+ AYG + +F +M+ E ++ S+L I+ G + +S + K
Sbjct: 460 VMLVAYGLLDDLRNSFRIFRQMQIE-EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 518
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
+ N Q N +++I K+G +D A ++ +R D +++T++ G + D
Sbjct: 519 T-NFQLNAYVCSVLIDMYAKLGKLDTAWDIL----IRFAGKDVVSWTTMIAGYTQYNFDD 573
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALC-----KKGDLIRAAKLVDNMSLKGCVPN--- 277
+A++ +M G + +SA K+G I A V S N
Sbjct: 574 KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 633
Query: 278 -----------------------EVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDV 314
+ +N LV G + G +A+ + +M N+
Sbjct: 634 TLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNF 693
Query: 315 TFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEM 374
TFG+ V + G V + + G+ + ++LIS K G A + + E+
Sbjct: 694 TFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV 753
Query: 375 MEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDC 434
K N V ++A+I+ + G EA + +M + PN T ++ G
Sbjct: 754 STK----NEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLV 809
Query: 435 HKAILVWKEMKNN-SCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSS 493
K I ++ M + + Y +++ L + G L A ++M IK D + + +
Sbjct: 810 DKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEM---PIKPDALVWRT 866
Query: 494 MIHGFCNAQLVDQGMKLFNQMLCQEAELQP-DVATYNILLNAF 535
++ +A +V + M++ EL+P D ATY +L N +
Sbjct: 867 LL----SACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 905
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 91/456 (19%), Positives = 178/456 (39%), Gaps = 87/456 (19%)
Query: 174 LTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRI--DEAVSLL 231
T+N +IK L L+ + +F + N P+ T+S +++ C+ G + D +
Sbjct: 152 FTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA-CRGGSVAFDVVEQIH 210
Query: 232 DEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRK 291
+ +G + V N LI + G + A ++ D + LK + ++ ++ GL +
Sbjct: 211 ARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK----DHSSWVAMISGLSKN 266
Query: 292 GKLNKAVSLLNQMVANKCVPNDVTF---------------GTLVHGFV-KQGRASDG--A 333
+A+ L M +P F G +HG V K G +SD
Sbjct: 267 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 326
Query: 334 SVLISLEERGHRGN----EYI-----------YSSLISGLFKEGKFEHAMQLWKEMMEKG 378
+ L+SL H GN E+I Y++LI+GL + G E AM+L+K M G
Sbjct: 327 NALVSL--YFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG 384
Query: 379 CEPNTVVYSALI-----DGLCREGKA------------------------------DEAR 403
EP++ ++L+ DG G+ + A
Sbjct: 385 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 444
Query: 404 EYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGL 463
+Y +E + + N ++ ++ + D + ++++M+ N+ Y ++
Sbjct: 445 DYFLETE----VENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 464 CKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQP 523
+ G L + Q++ +L+ S +I + +D + + +
Sbjct: 501 IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK------ 554
Query: 524 DVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
DV ++ ++ + Q N +A+ MLD+G D
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 142/328 (43%), Gaps = 43/328 (13%)
Query: 202 RNCAPDSYTYSTLMDGLCK-EGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLI 260
R P+ T L++G K G +DE L ++ G N + L KGDL
Sbjct: 78 RGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLY 137
Query: 261 RAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTF---- 316
A K+ D M + T+N ++ L + + + L +MV+ PN+ TF
Sbjct: 138 GAFKVFDEMPERTI----FTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 317 -----GTLVHGFVKQGRA-------SDGASV---LISLEER------------GHRGNEY 349
G++ V+Q A D V LI L R G R ++
Sbjct: 194 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 350 -IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIE 408
+ ++ISGL K A++L+ +M G P +S+++ C++ ++ E E L
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSA-CKKIESLEIGEQLHG 312
Query: 409 MKNK-GHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNG 467
+ K G +++ ++L+ +F G+ A + + +N + V Y+ LINGL + G
Sbjct: 313 LVLKLGFSSDTYVCNALVSLYFHLGNLISA----EHIFSNMSQRDAVTYNTLINGLSQCG 368
Query: 468 KLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
+AM ++K+M G++ D +S++
Sbjct: 369 YGEKAMELFKRMHLDGLEPDSNTLASLV 396
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/473 (20%), Positives = 209/473 (44%), Gaps = 25/473 (5%)
Query: 107 IFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEG-HFHRALEFYSHVCK 165
+ K + K + V L+ M E + +F +LN + ++G + + HV K
Sbjct: 105 MIKGWSKVDCDGEGVRLYLNMLKEGVTPDS-HTFPFLLNGLKRDGGALACGKKLHCHVVK 163
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
+ N N ++K GL+D A RG+ R C D ++++ ++ G + +
Sbjct: 164 -FGLGSNLYVQNALVKMYSLCGLMDMA----RGVFDRRCKEDVFSWNLMISGYNRMKEYE 218
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
E++ LL EM+ P +++SA K D ++ + +S P+ N LV
Sbjct: 219 ESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALV 278
Query: 286 DGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR 345
+ G+++ AV + M A +++ ++V G+V++G + + R
Sbjct: 279 NAYAACGEMDIAVRIFRSMKARDV----ISWTSIVKGYVERGNLKLARTYFDQMPVR--- 331
Query: 346 GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREY 405
+ ++ +I G + G F ++++++EM G P+ +++ C + E E+
Sbjct: 332 -DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTA-CAHLGSLEIGEW 389
Query: 406 LIEMKNKGHLPNSFTY-SSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLC 464
+ +K + N ++L+ +F+ G KA V+ +M ++ ++ ++ GL
Sbjct: 390 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD----QRDKFTWTAMVVGLA 445
Query: 465 KNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPD 524
NG+ EA+ V+ QM I+ D + Y ++ ++ +VDQ K F +M + ++P
Sbjct: 446 NNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMR-SDHRIEPS 504
Query: 525 VATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPP 577
+ Y +++ + + A ++L M +P+ I L R + + P
Sbjct: 505 LVHYGCMVDMLGRAGLVKEAYEILRKM---PMNPNSIVWGALLGASRLHNDEP 554
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 75/124 (60%)
Query: 367 AMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMR 426
A+ M E G +P+ + Y+ LIDG G+ D+A+E EM KG LPN FTY+S++R
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 427 GFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKL 486
G AG+ +A + KEM++ CN N V YS L+ L K GKL EA V K+M+ +G +
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHYV 827
Query: 487 DVVA 490
+V+
Sbjct: 828 HLVS 831
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
Query: 292 GKLNK---AVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNE 348
GK NK A++ LN M P+ + + TL+ G+V G + + +G N
Sbjct: 700 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNV 759
Query: 349 YIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIE 408
+ Y+S+I GL G+F A L KEM +GC PN VVYS L+ L + GK EAR+ + E
Sbjct: 760 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKE 819
Query: 409 MKNKGH 414
M KGH
Sbjct: 820 MVKKGH 825
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%)
Query: 206 PDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKL 265
P Y+TL+DG G +D+A + EM ++G PN F +N +I LC G+ A L
Sbjct: 722 PSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWL 781
Query: 266 VDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
+ M +GC PN V Y+TLV L + GKL++A ++ +MV
Sbjct: 782 LKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMV 821
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 6/134 (4%)
Query: 227 AVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVD 286
A++ L+ M+ G P+ + LI G+L +A ++ M++KG +PN TYN+++
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 287 GLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRG 346
GLC G+ +A LL +M + C PN V + TLV K G+ S+ V+ + ++GH
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGH-- 825
Query: 347 NEYIYSSLISGLFK 360
Y L+S + K
Sbjct: 826 ----YVHLVSKMMK 835
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 156 ALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLM 215
AL +H+ K + I P+ L + +I G +D+A E+FR + ++ P+ +TY++++
Sbjct: 708 ALTTLNHM-KEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 766
Query: 216 DGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKG 273
GLC G EA LL EM+ G PN V++ L+ L K G L A K++ M KG
Sbjct: 767 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 63/119 (52%)
Query: 260 IRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTL 319
+ A +++M G P+ + Y TL+DG G+L+KA + +M +PN T+ ++
Sbjct: 706 LAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSM 765
Query: 320 VHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG 378
+ G G + +L +E RG N +YS+L+ L K GK A ++ KEM++KG
Sbjct: 766 IRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%)
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
Y++LI G G+ + A ++++EM KG PN Y+++I GLC G+ EA L EM+
Sbjct: 727 YTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEME 786
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEM 444
++G PN YS+L+ +AG +A V KEM
Sbjct: 787 SRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 402 AREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILIN 461
A L MK G P+ Y++L+ G+ +G+ KA +++EM N Y+ +I
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 462 GLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
GLC G+ EA + K+M SRG + V YS+++ A + + K+ +M+
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMV 821
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 2/129 (1%)
Query: 112 GKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQP 171
GK + P A+ + M+ E +V + ++++ + G +A E + + + P
Sbjct: 700 GKGNKPLAALTTLNHMK-EVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQL-P 757
Query: 172 NGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLL 231
N T+N +I+ LC G +A + + + R C P+ YSTL+ L K G++ EA ++
Sbjct: 758 NVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVI 817
Query: 232 DEMQIEGTF 240
EM +G +
Sbjct: 818 KEMVKKGHY 826
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 207/492 (42%), Gaps = 80/492 (16%)
Query: 58 KWGSYKLGDLSFYSLIEKLAASSDF---ASLEELLQQMKRERRVFIEKNFIVIFKAYGKA 114
K Y + D +F SL+ AAS D + ++ + K + +F+ + Y K
Sbjct: 420 KSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALV---DMYAKC 476
Query: 115 HFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLN---IQP 171
E A +F RM C + ++N+++ +Q+ + A + + K +N I
Sbjct: 477 GALEDARQIFERM-----CDRDNVTWNTIIGSYVQDENESEAFDLF----KRMNLCGIVS 527
Query: 172 NGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLL 231
+G +KA V + Q +V D +T S+L+D K G I +A
Sbjct: 528 DGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA---- 583
Query: 232 DEMQIEGTFPNPFV--FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
++ + P V N LI+ + +L A L M +G P+E+T+ T+V+ C
Sbjct: 584 --RKVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEA-C 639
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHG-FVKQGRASDGASVLISL--------- 339
K P +T GT HG K+G +S+G + ISL
Sbjct: 640 HK-------------------PESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRG 680
Query: 340 --------EERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALID 391
E + +++ ++SG + G +E A++ +KEM G P+ + ++
Sbjct: 681 MTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLR 740
Query: 392 GLC------REGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMK 445
+C REG+A + + + H + T ++L+ + + GD + V+ EM+
Sbjct: 741 -VCSVLSSLREGRAIHSLIFHL-----AHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMR 794
Query: 446 NNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVD 505
S N V ++ LING KNG +A+ ++ M I D + + ++ +A V
Sbjct: 795 RRS---NVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVS 851
Query: 506 QGMKLFNQMLCQ 517
G K+F M+ Q
Sbjct: 852 DGRKIFEMMIGQ 863
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 105/473 (22%), Positives = 197/473 (41%), Gaps = 62/473 (13%)
Query: 96 RRVF---IEKN---FIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQ 149
RRVF ++ N + +F Y KA PE+AV +F RM E H + +F +V+N I+
Sbjct: 215 RRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHL-AFVTVINTYIR 273
Query: 150 EGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSY 209
G A + + P+ + +N++I K G A+E F + +
Sbjct: 274 LGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRS 328
Query: 210 TYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNM 269
T +++ + +D + + E G N +V + L+S K + AAK+ + +
Sbjct: 329 TLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEAL 388
Query: 270 SLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRA 329
K N+V +N ++ G G+ +K + L M ++ +D TF +L+
Sbjct: 389 EEK----NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDL 444
Query: 330 SDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSAL 389
G+ + ++ N ++ ++L+ K G E A Q+++ M C+ + V ++ +
Sbjct: 445 EMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM----CDRDNVTWNTI 500
Query: 390 IDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSC 449
I ++ EA + M + G G C + L +C
Sbjct: 501 IGSYVQDENESEAFDLFKRMN--------------LCGIVSDGACLASTL-------KAC 539
Query: 450 NHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMK 509
H ++GL + GK + + V G+ D+ SS+I + ++ K
Sbjct: 540 TH--------VHGLYQ-GKQVHCLSV-----KCGLDRDLHTGSSLIDMYSKCGIIKDARK 585
Query: 510 LFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
+F+ + + V + N L+ A Y QNN+ A+ + ML +G +P IT
Sbjct: 586 VFSSL------PEWSVVSMNALI-AGYSQNNLEEAVVLFQEMLTRGVNPSEIT 631
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/447 (19%), Positives = 181/447 (40%), Gaps = 58/447 (12%)
Query: 167 LNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDE 226
L I G N ++ K V A + F + A +S ++ + K G++
Sbjct: 89 LGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKDVTAWNSML--SMYSSIGKPGKVLR 146
Query: 227 AVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVD 286
+ L E QI FPN F F++++S ++ ++ ++ +M G N LVD
Sbjct: 147 SFVSLFENQI---FPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVD 203
Query: 287 GLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRG 346
+ +++ A + +V PN V + L G+VK G + V + + GHR
Sbjct: 204 MYAKCDRISDARRVFEWIVD----PNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRP 259
Query: 347 NEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYL 406
+ + ++I+ + GK + A L+ EM P+ V ++ +I G + G A EY
Sbjct: 260 DHLAFVTVINTYIRLGKLKDARLLFGEM----SSPDVVAWNVMISGHGKRGCETVAIEYF 315
Query: 407 IEMKNK-----------------------------------GHLPNSFTYSSLMRGFFEA 431
M+ G N + SSL+ + +
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375
Query: 432 GDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAY 491
A V++ ++ N+V ++ +I G NG+ + M ++ M S G +D +
Sbjct: 376 EKMEAAAKVFEALEEK----NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 492 SSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIM 551
+S++ + ++ G + F+ ++ ++ +L ++ N L++ + + + A + M
Sbjct: 432 TSLLSTCAASHDLEMGSQ-FHSIIIKK-KLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 552 LDQGCDPDFITCDIFLKTLRDNMNPPQ 578
CD D +T + + + + N +
Sbjct: 490 ----CDRDNVTWNTIIGSYVQDENESE 512
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 121/255 (47%), Gaps = 27/255 (10%)
Query: 259 LIRAAKLVDNM----SLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVAN------- 307
L ++ K+ D M +L + V +L+ G+ +G+L A+ L A
Sbjct: 58 LFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQ 117
Query: 308 -KCVPNDVT-FGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFE 365
+ DVT + +++ + G+ +SL E N++ +S ++S +E E
Sbjct: 118 FDFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVE 177
Query: 366 HAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAR---EYLIEMKNKGHLPNSFTYS 422
Q+ M++ G E N+ AL+D + + +AR E++++ PN+ ++
Sbjct: 178 FGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVD-------PNTVCWT 230
Query: 423 SLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSR 482
L G+ +AG +A+LV++ M++ + + + +IN + GKL +A +++ +M S
Sbjct: 231 CLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSP 290
Query: 483 GIKLDVVAYSSMIHG 497
DVVA++ MI G
Sbjct: 291 ----DVVAWNVMISG 301
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 178/431 (41%), Gaps = 99/431 (22%)
Query: 87 ELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNV 146
EL Q++ + R + +K F ++ K A +K VN FH M F + NV
Sbjct: 133 ELAQEIGK-RGLVNDKTFRIVLKTLASARELKKCVNYFHLMNG----------FGYLYNV 181
Query: 147 IIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRN-CA 205
T N ++ LCK LV++A VF I L+
Sbjct: 182 ---------------------------ETMNRGVETLCKEKLVEEAKFVF--IKLKEFIK 212
Query: 206 PDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKL 265
PD TY T++ G C G + EA L + M EG + ++ L KK A+K+
Sbjct: 213 PDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKV 272
Query: 266 VDNM-SLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFV 324
M S +G + Y ++D LC+ G+++ A + ++M +++T+ +L++G +
Sbjct: 273 FYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLL 332
Query: 325 KQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTV 384
+ R + ++ +E + IY LI GL K + A +++++M+++GCEP
Sbjct: 333 VKRRVVEAYGLVEGVEN----PDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMH 388
Query: 385 VYSALIDG-LCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKE 443
Y L+ G L R G+ KG P
Sbjct: 389 TYLMLLQGHLGRRGR-------------KGPDP--------------------------- 408
Query: 444 MKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQL 503
N + +I + G+ K GK +E ++ L RG+++ YS +H + N
Sbjct: 409 ----LVNFD----TIFVGGMIKAGKRLETTKYIERTLKRGLEVPRFDYSKFLHYYSN--- 457
Query: 504 VDQGMKLFNQM 514
++G+ +F +M
Sbjct: 458 -EEGVVMFEEM 467
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 11/183 (6%)
Query: 452 NEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLF 511
+E+ Y +I G C G L+EA +W M+ G +D+ A ++ D+ K+F
Sbjct: 214 DEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVF 273
Query: 512 NQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLR 571
M+ + D Y ++++ + I A V + M ++G D +T + L
Sbjct: 274 YVMVSKRGG-DLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLL 332
Query: 572 DNMNPPQ-----DGREFLD-----ELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAI 621
+ +G E D L+ LVK +R A+++ M+ R P T+ +
Sbjct: 333 VKRRVVEAYGLVEGVENPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLM 392
Query: 622 VVQ 624
++Q
Sbjct: 393 LLQ 395
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/437 (20%), Positives = 190/437 (43%), Gaps = 34/437 (7%)
Query: 169 IQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAV 228
I PN +N ++ A+ G +A ++ + + P+ TY+TLM +EG +A+
Sbjct: 183 IGPNLFIYNSLLGAMRGFG---EAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKAL 239
Query: 229 SLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGC---VPNEVTYN--- 282
+LD + +G PNP ++ + + D + A + + K + N+V Y+
Sbjct: 240 GILDLTKEKGFEPNPITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEF 299
Query: 283 ------TLVDGLCRK----------GKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQ 326
+ +C + + + LLN M + P+ L+ ++
Sbjct: 300 EFVKLENFIGRICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTRE 359
Query: 327 GRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVY 386
G + + ER + + + LI + K K+ A++++++++++G EPN + Y
Sbjct: 360 EHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSY 419
Query: 387 -------SALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAIL 439
+ L+ + G L +M++KG P +++++ +A + AI
Sbjct: 420 ELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQ 479
Query: 440 VWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFC 499
++K M +N + Y L++ L K EA VW M+ GI+ ++ AY++M
Sbjct: 480 IFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLT 539
Query: 500 NAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
Q + L +M + ++P V T+N +++ + A + + M + +P+
Sbjct: 540 GQQKFNLLDTLLKEMASK--GIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPN 597
Query: 560 FITCDIFLKTLRDNMNP 576
IT ++ ++ L ++ P
Sbjct: 598 EITYEMLIEALANDAKP 614
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 115/276 (41%), Gaps = 42/276 (15%)
Query: 227 AVSLLDEMQIEGTFPNPFV-------FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEV 279
A+ + +++ EG PN FN+L+SA K+G +L++ M KG P
Sbjct: 400 ALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRR 459
Query: 280 TYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISL 339
+N ++ + + A+ + MV N P +++G
Sbjct: 460 HWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYG---------------------- 497
Query: 340 EERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKA 399
+L+S L K ++ A ++W M++ G EPN Y+ + L + K
Sbjct: 498 -------------ALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKF 544
Query: 400 DEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSIL 459
+ L EM +KG P+ T+++++ G G A + MK+ + NE+ Y +L
Sbjct: 545 NLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEML 604
Query: 460 INGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMI 495
I L + K A + + + G+KL Y +++
Sbjct: 605 IEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVV 640
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 111/243 (45%), Gaps = 9/243 (3%)
Query: 192 AVEVFRGIHLRNCAPDSYTY-------STLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPF 244
A+E++ + P++ +Y + L+ K G V LL++M+ +G P
Sbjct: 400 ALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRR 459
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKL-NKAVSLLNQ 303
+N ++ A K + A ++ M G P ++Y L+ L KGKL ++A + N
Sbjct: 460 HWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSAL-EKGKLYDEAFRVWNH 518
Query: 304 MVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGK 363
M+ PN + T+ Q + + ++L + +G + ++++ISG + G
Sbjct: 519 MIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGL 578
Query: 364 FEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSS 423
A + + M + EPN + Y LI+ L + K A E ++ +N+G +S Y +
Sbjct: 579 SGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDA 638
Query: 424 LMR 426
+++
Sbjct: 639 VVK 641
>AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11605156-11610651 FORWARD
LENGTH=843
Length = 843
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 146/289 (50%), Gaps = 17/289 (5%)
Query: 200 HLRNCAPDS--------YTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLIS 251
LR+C D ++Y+T + E I + L +E+ I P+ + L+S
Sbjct: 345 ELRDCRKDGVETVSNLIFSYATCIPNSTVEDAIFKFNKLHEELDI---VPSSTSYENLVS 401
Query: 252 ALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCV- 310
LC +++ A +V+NM G V + ++L+ + + + N V + +++NK V
Sbjct: 402 YLCGSNEVVTALDIVENMCEAGLVISANILHSLLQAIEQILEFN-LVQRIYSIMSNKSVK 460
Query: 311 PNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQL 370
PN TF ++ ++ ++L +L+ N +Y+S+++G F+E K A+++
Sbjct: 461 PNSETFRKSINLCIRIKDFEGAYNMLGNLKNFNLAPNSSMYNSIMAGYFREKKVNSALKV 520
Query: 371 WKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFE 430
KEM E +P++V +S LI+ C G+ +Y EMK G N Y SL++ +
Sbjct: 521 LKEMKEADVKPDSVTFSYLIN-YC--GEEATIAKYYKEMKQAGVEVNKHVYMSLVKAYAS 577
Query: 431 AGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM 479
G KA V +++ + +HNE+ S+LI+ L NG + EA+ ++++M
Sbjct: 578 CGQFEKAKQVLMDLEVPAKDHNEL-KSVLISALASNGNITEALSIYEEM 625
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 102/248 (41%), Gaps = 42/248 (16%)
Query: 140 FNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGI 199
+S+L I Q F+ YS + + +++PN TF I ++ + A + +
Sbjct: 431 LHSLLQAIEQILEFNLVQRIYS-IMSNKSVKPNSETFRKSINLCIRIKDFEGAYNMLGNL 489
Query: 200 HLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDL 259
N AP+S Y+++M G +E +++ A+ +L EM+ P+ F+ LI+ C G+
Sbjct: 490 KNFNLAPNSSMYNSIMAGYFREKKVNSALKVLKEMKEADVKPDSVTFSYLIN-YC--GEE 546
Query: 260 IRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTL 319
AK M G N+ Y +LV G+ KA
Sbjct: 547 ATIAKYYKEMKQAGVEVNKHVYMSLVKAYASCGQFEKA---------------------- 584
Query: 320 VHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGC 379
KQ VL+ LE NE + S LIS L G A+ +++EM + C
Sbjct: 585 -----KQ--------VLMDLEVPAKDHNE-LKSVLISALASNGNITEALSIYEEMKKLRC 630
Query: 380 --EPNTVV 385
EP ++
Sbjct: 631 PVEPKAIL 638
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/464 (20%), Positives = 208/464 (44%), Gaps = 43/464 (9%)
Query: 111 YGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQ 170
YGK + A +F + + ++N+++ +Q G A+ +S + K ++
Sbjct: 218 YGKCGVLDDASKVFDEIP-----DRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQ-GVE 271
Query: 171 PNGLTFNLVIKALCKVGLVDQ-----AVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
P +T + + A +G V++ A+ + G+ L D+ ++L++ CK G I+
Sbjct: 272 PTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMEL-----DNILGTSLLNFYCKVGLIE 326
Query: 226 EAVSLLDEMQIEGTFPNPFV-FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTL 284
A + D M F V +N++IS ++G + A + M L+ + VT TL
Sbjct: 327 YAEMVFDRM-----FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATL 381
Query: 285 VDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGH 344
+ R L + + + + V T++ + K G D V S E+
Sbjct: 382 MSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK-- 439
Query: 345 RGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE 404
+ ++++L++ + G A++L+ M +G PN + ++ +I L R G+ DEA++
Sbjct: 440 --DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKD 497
Query: 405 YLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLC 464
++M++ G +PN +++++M G + G +AIL ++M+ + N ++ ++ C
Sbjct: 498 MFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSA-C 556
Query: 465 KN------GKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQE 518
+ G+ + ++ S + ++ +S++ + +++ K+F L E
Sbjct: 557 AHLASLHIGRTIHGYIIRNLQHSSLVSIE----TSLVDMYAKCGDINKAEKVFGSKLYSE 612
Query: 519 AELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
L N +++A+ N+ A+ + + G PD IT
Sbjct: 613 LPLS------NAMISAYALYGNLKEAIALYRSLEGVGLKPDNIT 650
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 188/429 (43%), Gaps = 37/429 (8%)
Query: 156 ALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLM 215
ALE + L ++ N ++ +I C++GL + A+ F + PD++ +
Sbjct: 122 ALEIAEVLFSKLRVR-NVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVC 180
Query: 216 D--GLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKG 273
G K R V + G FV + L K G L A+K+ D + +
Sbjct: 181 KACGALKWSRFGRGVH--GYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR- 237
Query: 274 CVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVH-----GFVKQGR 328
N V +N L+ G + GK +A+ L + M P VT T + G V++G+
Sbjct: 238 ---NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGK 294
Query: 329 ASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSA 388
S +++ +E G +SL++ K G E+A ++ M EK + V ++
Sbjct: 295 QSHAIAIVNGMELDNILG-----TSLLNFYCKVGLIEYAEMVFDRMFEK----DVVTWNL 345
Query: 389 LIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMK--- 445
+I G ++G ++A M+ + + T ++LM A + + + KE++
Sbjct: 346 IISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLM----SAAARTENLKLGKEVQCYC 401
Query: 446 -NNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLV 504
+S + V S +++ K G +++A K++ ++ D++ +++++ + + L
Sbjct: 402 IRHSFESDIVLASTVMDMYAKCGSIVDA----KKVFDSTVEKDLILWNTLLAAYAESGLS 457
Query: 505 DQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCD 564
+ ++LF M Q + P+V T+N+++ + + + A D+ M G P+ I+
Sbjct: 458 GEALRLFYGM--QLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWT 515
Query: 565 IFLKTLRDN 573
+ + N
Sbjct: 516 TMMNGMVQN 524
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 155/397 (39%), Gaps = 85/397 (21%)
Query: 205 APDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISA------------ 252
+P S +Y + LCK G I EA+SL+ EM P ++ ++
Sbjct: 32 SPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQ 91
Query: 253 ----LCKKGDLIR-----------------AAKLVDNMSLKGCVPNEVTYNTLVDGLCRK 291
+ K GD A ++ + + K V N ++ ++ CR
Sbjct: 92 IHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRI 151
Query: 292 GKLNKAVSLLNQMVANKCVPNDVT---------------FGTLVHGFVKQGRASDGASVL 336
G A+ +M+ N+ P++ FG VHG+V + D
Sbjct: 152 GLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCV--- 208
Query: 337 ISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCRE 396
++ SSL K G + A +++ E+ ++ N V ++AL+ G +
Sbjct: 209 ------------FVASSLADMYGKCGVLDDASKVFDEIPDR----NAVAWNALMVGYVQN 252
Query: 397 GKADEAREYLIEMKNKGHLPNSFTYSSL------MRGFFEAGDCHKAILVWKEMKNNSCN 450
GK +EA +M+ +G P T S+ M G E H +V N
Sbjct: 253 GKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIV------NGME 306
Query: 451 HNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKL 510
+ + + L+N CK G + A MV+ +M + DVV ++ +I G+ LV+ + +
Sbjct: 307 LDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK----DVVTWNLIISGYVQQGLVEDAIYM 362
Query: 511 FNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDV 547
M + +L+ D T L++A + N+ +V
Sbjct: 363 CQLMRLE--KLKYDCVTLATLMSAAARTENLKLGKEV 397
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/362 (19%), Positives = 152/362 (41%), Gaps = 55/362 (15%)
Query: 96 RRVF---IEKNFIV---IFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQ 149
++VF +EK+ I+ + AY ++ +A+ LF+ M+ E V ++N ++ +++
Sbjct: 430 KKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLE-GVPPNVITWNLIILSLLR 488
Query: 150 EGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSY 209
G A + + + +S I PN +++ ++ + + G ++A+ R + P+++
Sbjct: 489 NGQVDEAKDMFLQM-QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAF 547
Query: 210 TYS------------------------------------TLMDGLCKEGRIDEAVSLLDE 233
+ + +L+D K G I++A +
Sbjct: 548 SITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGS 607
Query: 234 MQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGK 293
++ P + N +ISA G+L A L ++ G P+ +T ++ G
Sbjct: 608 -KLYSELP---LSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGD 663
Query: 294 LNKAVSLLNQMVANKCV-PNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYS 352
+N+A+ + +V+ + + P +G +V G + +EE + + +
Sbjct: 664 INQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRL---IEEMPFKPDARMIQ 720
Query: 353 SLISGLFKEGKFEHAMQLWKEMMEKGCEP-NTVVYSALIDGLCREGKADEAREYLIEMKN 411
SL++ K+ K E L ++++E EP N+ Y + + EG DE + MK
Sbjct: 721 SLVASCNKQRKTELVDYLSRKLLES--EPENSGNYVTISNAYAVEGSWDEVVKMREMMKA 778
Query: 412 KG 413
KG
Sbjct: 779 KG 780
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/379 (19%), Positives = 144/379 (37%), Gaps = 63/379 (16%)
Query: 276 PNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASV 335
P+ +Y V LC+ G++ +A+SL+ +M +G ++ G V + S G +
Sbjct: 33 PSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQI 92
Query: 336 LISLEERG--HRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGL 393
+ + G + NEYI + L+ K E A L+ ++ + N ++A+I
Sbjct: 93 HARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVR----NVFSWAAIIGVK 148
Query: 394 CREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNE 453
CR G + A +EM P++F ++ + C L W
Sbjct: 149 CRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKA------C--GALKWSRFGRG------ 194
Query: 454 VCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQ 513
V ++ G++ V SS+ + ++D K+F++
Sbjct: 195 ---------------------VHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDE 233
Query: 514 MLCQEAELQPD--VATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLR 571
+ PD +N L+ + Q A+ + + M QG +P +T L +
Sbjct: 234 I--------PDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCL-SAS 284
Query: 572 DNMNPPQDGREFLDELVVRLVKRQRTIGAS-----------KIIEVMLDRCLLPEASTWA 620
NM ++G++ +V ++ +G S + E++ DR + TW
Sbjct: 285 ANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWN 344
Query: 621 IVVQQLCKPRNIRKAISEC 639
+++ + + AI C
Sbjct: 345 LIISGYVQQGLVEDAIYMC 363
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 160/352 (45%), Gaps = 15/352 (4%)
Query: 62 YKLGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAV 121
Y+ +++ + + LA + A ++ +MK +I + + + K+ + V
Sbjct: 259 YQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETV 318
Query: 122 NLF-HRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLT---FN 177
L+ + M+ F K +++ + +L + G + L+ V + L+ ++
Sbjct: 319 KLYEYMMDGPF--KPSIQDCSLLLRYL--SGSPNPDLDLVFRVSRKYESTGKSLSKAVYD 374
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
+ ++L VG D+A E+ + + PD+ TYS L+ GLCK R++EA +LD+M+ +
Sbjct: 375 GIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQ 434
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G FP+ + +LI CK +L +A NM KG + + L+DG K A
Sbjct: 435 GCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGA 494
Query: 298 VSLLNQMVANKCV-PNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLIS 356
L +MV N V P T+ L+ +K ++ + +L ++++ + Y+
Sbjct: 495 SIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPA----YAEAFD 550
Query: 357 G-LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLI 407
G L K G E A + + K P+ Y +I+ REG+ +A+ L
Sbjct: 551 GYLAKFGTLEDAKKFLDVLSSKDS-PSFAAYFHVIEAFYREGRLTDAKNLLF 601
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 5/210 (2%)
Query: 378 GCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKA 437
G + VY + L G+ DEA E M+N G+ P++ TYS L+ G +A +A
Sbjct: 365 GKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEA 424
Query: 438 ILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHG 497
V +M+ C + ++ILI G CKN +L +A+ + ML +G +D +I G
Sbjct: 425 RGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDG 484
Query: 498 FCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCD 557
F +G +F + + A ++P +TY +L++ + A+D+L +M Q
Sbjct: 485 FVIHNKF-EGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYP 543
Query: 558 PDFITCDIFLKTLRDNMNPPQDGREFLDEL 587
D +L +D ++FLD L
Sbjct: 544 AYAEAFDGYLA----KFGTLEDAKKFLDVL 569
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 173/431 (40%), Gaps = 48/431 (11%)
Query: 127 MEAEFHCKQTVKSFNSVLNVIIQ-EGHFHRALEFYSHVCKSLN---IQPNGLTFNLVIKA 182
+E E + V S N V+ V+ + H +AL F+ V + Q + +T+N ++
Sbjct: 213 VERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRV 272
Query: 183 LCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTF-P 241
L + V + V + D TY + K + E V L + M ++G F P
Sbjct: 273 LARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYM-MDGPFKP 331
Query: 242 NPFVFNVLISALC--KKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVS 299
+ ++L+ L DL ++ G ++ Y+ + L G+ ++A
Sbjct: 332 SIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEE 391
Query: 300 LLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
+ M P+++T+ LV G K R + VL +E +G + ++ LI G
Sbjct: 392 ITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHC 451
Query: 360 KEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSF 419
K + + A+ + M+EKG + ++ + LIDG K + A +L+EM
Sbjct: 452 KNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEM---------- 501
Query: 420 TYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM 479
+KN + + Y +LI+ L K K EA+ +
Sbjct: 502 ------------------------VKNANVKPWQSTYKLLIDKLLKIKKSEEAL----DL 533
Query: 480 LSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQN 539
L K + AY+ G+ + K F +L + P A Y ++ AFY++
Sbjct: 534 LQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKD--SPSFAAYFHVIEAFYREG 591
Query: 540 NISRAMDVLNI 550
++ A ++L I
Sbjct: 592 RLTDAKNLLFI 602
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 185/428 (43%), Gaps = 44/428 (10%)
Query: 172 NGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLL 231
N ++ +I A + G++D+AV +F G+ P S Y+TL+ L +D +
Sbjct: 148 NAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIH 207
Query: 232 DEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRK 291
+ G N + +++ K G L+ A ++ D M++K V L+ G +
Sbjct: 208 AHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVK----KPVACTGLMVGYTQA 263
Query: 292 GKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIY 351
G+ A+ L +V + F ++ + G + + + G +
Sbjct: 264 GRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVG 323
Query: 352 SSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKN 411
+ L+ K FE A + ++E+ EPN V +SA+I G C+ + +EA + +++
Sbjct: 324 TPLVDFYIKCSSFESACRAFQEIR----EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRS 379
Query: 412 K-GHLPNSFTYSSLMRGFFEAGDCH----------KAILVWKEMKNNSC----------- 449
K + NSFTY+S+ + DC+ K L+ + ++
Sbjct: 380 KNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLD 439
Query: 450 ----------NHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFC 499
N + V ++ I+G G EA+ ++++M+S G+K + V + +++
Sbjct: 440 DANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACS 499
Query: 500 NAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPD 559
+A LV+QG + ML ++ + P + Y+ +++ + + + A L M + +PD
Sbjct: 500 HAGLVEQGKHCLDTML-RKYNVAPTIDHYDCMIDIYARSGLLDEA---LKFMKNMPFEPD 555
Query: 560 FITCDIFL 567
++ FL
Sbjct: 556 AMSWKCFL 563
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 90/457 (19%), Positives = 181/457 (39%), Gaps = 79/457 (17%)
Query: 172 NGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGR-IDEAVSL 230
G NL + +L K +++A E + + + SY+Y L + C+E R + L
Sbjct: 47 QGQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEA-CRELRSLSHGRLL 105
Query: 231 LDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCR 290
D M++ P+ + N ++ C+ L A KL D MS N V+ T++
Sbjct: 106 HDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMS----ELNAVSRTTMISAYAE 161
Query: 291 KGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYI 350
+G L+KAV L + M+A+ P + TL+ V G + + G N I
Sbjct: 162 QGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSI 221
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
+ +++ K G A +++ +M K V + L+ G + G+A +A + +++
Sbjct: 222 ETGIVNMYVKCGWLVGAKRVFDQMAVK----KPVACTGLMVGYTQAGRARDALKLFVDLV 277
Query: 411 NKGHLPNSFTYSSLMRG-----------------------------------FFEAGDCH 435
+G +SF +S +++ + +
Sbjct: 278 TEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFE 337
Query: 436 KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIK-LDVVAYSSM 494
A ++E++ N+V +S +I+G C+ + EA+ +K + S+ L+ Y+S+
Sbjct: 338 SACRAFQEIREP----NDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSI 393
Query: 495 -----------IHGFCNAQLVDQGM-----------KLFNQMLCQ-------EAELQPDV 525
I G +A + + + ++++ C E+ PD+
Sbjct: 394 FQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDI 453
Query: 526 ATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
+ ++ N S A+ + M+ G P+ +T
Sbjct: 454 VAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVT 490
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 134/328 (40%), Gaps = 65/328 (19%)
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAP-DSYTYSTLMDGLCKEGRIDEAV 228
+PN ++++ +I C++ ++AV+ F+ + +N + +S+TY+++ +A
Sbjct: 348 EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIF----------QAC 397
Query: 229 SLLDEMQIEGT----------FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNE 278
S+L + I G + + + LI+ K G L A ++ ++M P+
Sbjct: 398 SVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMD----NPDI 453
Query: 279 VTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLIS 338
V + + G G ++A+ L +MV+ PN VTF +VL +
Sbjct: 454 VAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTF----------------IAVLTA 497
Query: 339 LEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEK-GCEPNTVVYSALIDGLCREG 397
+GL ++GK H + M+ K P Y +ID R G
Sbjct: 498 CSH--------------AGLVEQGK--HCLDT---MLRKYNVAPTIDHYDCMIDIYARSG 538
Query: 398 KADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYS 457
DEA ++ MKN P++ ++ + G + + + +E++ + Y
Sbjct: 539 LLDEALKF---MKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLD-PEDTAGYV 594
Query: 458 ILINGLCKNGKLMEAMMVWKQMLSRGIK 485
+ N GK EA + K M R +K
Sbjct: 595 LPFNLYTWAGKWEEAAEMMKLMNERMLK 622
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/437 (19%), Positives = 193/437 (44%), Gaps = 7/437 (1%)
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRG 198
SF + V+ ++ + + +F+S + L+ +P+ + + +V++ +VG + A E F
Sbjct: 154 SFRDMCVVLKEQRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLE 213
Query: 199 IHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGD 258
+ C PD+ T++ + GR ++ +Q + V+N ++S+L KK
Sbjct: 214 MLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSF 273
Query: 259 LIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
+ L M +G PNE TY +V ++G +A+ +M + VP +VT+ +
Sbjct: 274 HGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSS 333
Query: 319 LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG 378
++ VK G + + +G + Y ++++S +K + A+ L+ +M
Sbjct: 334 VISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNK 393
Query: 379 CEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAI 438
+ V+ +I + G +A+ E + L + TY ++ + +G+ KA+
Sbjct: 394 IPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKAL 453
Query: 439 LVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGF 498
V + MK + Y +++ K + A ++ + G+ D + + M++ +
Sbjct: 454 DVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGLP-DASSCNDMLNLY 512
Query: 499 CNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDP 558
L ++ Q++ + D+ Y + + ++ ++ A D++ M +
Sbjct: 513 TRLNLGEKAKGFIKQIMVDQVHF--DIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVK 570
Query: 559 DFITCDIFLKTLRDNMN 575
D + F++TL ++M+
Sbjct: 571 D----NRFVQTLAESMH 583
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 151/354 (42%), Gaps = 39/354 (11%)
Query: 107 IFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKS 166
+ AY + + E A LF AE C + + ++N + G HR E S C
Sbjct: 710 MIDAYVRCGWLEDAYGLFME-SAEKGCDPGAVTISILVNALTNRGK-HREAEHISRTCLE 767
Query: 167 LNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDE 226
NI+ + + +N +IKA+ + G + A E++ +H TY+T++ + ++D+
Sbjct: 768 KNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDK 827
Query: 227 AVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVD 286
A+ + + G + + ++ +I K G + A L M KG P +YN +V
Sbjct: 828 AIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK 887
Query: 287 GLCRKGKLNKAVS-LLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR 345
+C +L+ V LL M N + T+ TL+ + + + ++ + ++E+G
Sbjct: 888 -ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIP 946
Query: 346 GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREY 405
+ +SSL+S L K G E A + + +M E G P D C+
Sbjct: 947 LSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISP---------DSACKR--------- 988
Query: 406 LIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSIL 459
++++G+ GD K IL +++M +S + S++
Sbjct: 989 -----------------TILKGYMTCGDAEKGILFYEKMIRSSVEDDRFVSSVV 1025
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 162/382 (42%), Gaps = 2/382 (0%)
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRG 198
+ N V++ ++EG +A E + + L ++ T +I + + +A ++
Sbjct: 637 AVNRVISSFVREGDVSKA-EMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLA 695
Query: 199 IHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGD 258
+ P +++D + G +++A L E +G P ++L++AL +G
Sbjct: 696 AG-ESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGK 754
Query: 259 LIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
A + K + V YNTL+ + GKL A + +M + + T+ T
Sbjct: 755 HREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNT 814
Query: 319 LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG 378
++ + + + + + G +E IY+++I K GK A+ L+ EM +KG
Sbjct: 815 MISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKG 874
Query: 379 CEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAI 438
+P T Y+ ++ E E L M+ G + TY +L++ + E+ +A
Sbjct: 875 IKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAE 934
Query: 439 LVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGF 498
+K + +S L++ L K G + EA + +M GI D +++ G+
Sbjct: 935 KTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGY 994
Query: 499 CNAQLVDQGMKLFNQMLCQEAE 520
++G+ + +M+ E
Sbjct: 995 MTCGDAEKGILFYEKMIRSSVE 1016
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/514 (15%), Positives = 200/514 (38%), Gaps = 68/514 (13%)
Query: 120 AVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFH-RALEFYSHVCKSLNIQPNGLTFNL 178
A+ F++ E + +N +L+ + Q+ FH + ++ + + + + PN T+ L
Sbjct: 241 AMLTFYKAVQERRILLSTSVYNFMLSSL-QKKSFHGKVIDLWLEMVEE-GVPPNEFTYTL 298
Query: 179 VIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEG 238
V+ + K G ++A++ F + P+ TYS+++ K G ++A+ L ++M+ +G
Sbjct: 299 VVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQG 358
Query: 239 TFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAV 298
P+ + ++S K + +A L +M +EV ++ + G + A
Sbjct: 359 IVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQ 418
Query: 299 SLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGL 358
S+ + + ++ T+ + + G V+ ++ R + + Y ++
Sbjct: 419 SMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCY 478
Query: 359 FK-------EGKF---------------------------EHAMQLWKEMMEKGCEPNTV 384
K E F E A K++M +
Sbjct: 479 AKIQNVDCAEEAFRALSKTGLPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIE 538
Query: 385 VYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRG--FFEAGDCHKAILVWK 442
+Y + C+EG EA++ +++M + + ++ +L D H+A+L
Sbjct: 539 LYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVS 598
Query: 443 EM-------------KNNSCNHNEVCYSIL-------------INGLCKNGKLMEAMMVW 476
++ K + N + +++ I+ + G + +A M+
Sbjct: 599 QLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVNRVISSFVREGDVSKAEMIA 658
Query: 477 KQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFY 536
++ G++++ +++I + + + +L+ L P + +++A+
Sbjct: 659 DIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLY---LAAGESKTPGKSVIRSMIDAYV 715
Query: 537 QQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
+ + A + ++GCDP +T I + L
Sbjct: 716 RCGWLEDAYGLFMESAEKGCDPGAVTISILVNAL 749
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 87/205 (42%), Gaps = 2/205 (0%)
Query: 381 PNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILV 440
P+ VVY+ ++ + GK A E +EM G P++ +++ + G +
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245
Query: 441 WKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCN 500
+K ++ + Y+ +++ L K + + +W +M+ G+ + Y+ ++ +
Sbjct: 246 YKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAK 305
Query: 501 AQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDF 560
++ +K F +M + P+ TY+ +++ + + +A+ + M QG P
Sbjct: 306 QGFKEEALKAFGEM--KSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSN 363
Query: 561 ITCDIFLKTLRDNMNPPQDGREFLD 585
TC L N P+ F D
Sbjct: 364 YTCATMLSLYYKTENYPKALSLFAD 388
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 174/374 (46%), Gaps = 28/374 (7%)
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVS 229
+ + + +I K G V A +VF + D ++ ++ G + DEA++
Sbjct: 149 ESDAFIVSSLIDMYSKFGEVGNARKVFSDL----GEQDLVVFNAMISGYANNSQADEALN 204
Query: 230 LLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
L+ +M++ G P+ +N LIS + + +++++ M L G P+ V++ +++ GL
Sbjct: 205 LVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLV 264
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTFGTLVH-----GFVKQGRASDGASVLISLEERGH 344
+ KA QM+ + PN T TL+ ++K G+ G SV+ LE+ G
Sbjct: 265 HNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHG- 323
Query: 345 RGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE 404
++ S+L+ K G AM L+++ +K TV ++++I G AD+A E
Sbjct: 324 ----FVRSALLDMYGKCGFISEAMILFRKTPKK----TTVTFNSMIFCYANHGLADKAVE 375
Query: 405 YLIEMKNKGHLPNSFTYSSLMRGFFEAG--DCHKAILVWKEMKNNSCNHNEVCYSILING 462
+M+ G + T+++++ AG D + + + + K E Y+ +++
Sbjct: 376 LFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLE-HYACMVDL 434
Query: 463 LCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQ 522
L + GKL+EA + K M ++ D+ + +++ N M+L AEL+
Sbjct: 435 LGRAGKLVEAYEMIKAM---RMEPDLFVWGALLAACRN----HGNMELARIAAKHLAELE 487
Query: 523 PDVATYNILLNAFY 536
P+ + +LL + Y
Sbjct: 488 PENSGNGLLLTSLY 501
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/340 (19%), Positives = 142/340 (41%), Gaps = 19/340 (5%)
Query: 88 LLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVI 147
L+ + E FI + I ++ +G+ K + +Q + FN++++
Sbjct: 142 LVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDL--------GEQDLVVFNAMISGY 193
Query: 148 IQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPD 207
AL + K L I+P+ +T+N +I + ++ E+ + L PD
Sbjct: 194 ANNSQADEALNLVKDM-KLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPD 252
Query: 208 SYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVD 267
++++++ GL + ++A +M G +PN L+ A C ++ K +
Sbjct: 253 VVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPA-CTTLAYMKHGKEIH 311
Query: 268 NMS-LKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQ 326
S + G + + L+D + G +++A+ L + VTF +++ +
Sbjct: 312 GYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKK----TTVTFNSMIFCYANH 367
Query: 327 GRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEK-GCEPNTVV 385
G A + +E G + + ++++++ G + L+ M K P
Sbjct: 368 GLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEH 427
Query: 386 YSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
Y+ ++D L R GK EA E + M+ + P+ F + +L+
Sbjct: 428 YACMVDLLGRAGKLVEAYEMIKAMRME---PDLFVWGALL 464
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 104/249 (41%), Gaps = 10/249 (4%)
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
I + L++ + GK A +++ EM ++ V +I R G E+ ++ EM
Sbjct: 53 IAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVV----MIGACARNGYYQESLDFFREM 108
Query: 410 KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKL 469
G ++F SL++ D ++ + S + S LI+ K G++
Sbjct: 109 YKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEV 168
Query: 470 MEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYN 529
A V+ + + D+V +++MI G+ N D+ + L M + ++PDV T+N
Sbjct: 169 GNARKVFSDLGEQ----DLVVFNAMISGYANNSQADEALNLVKDM--KLLGIKPDVITWN 222
Query: 530 ILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLDELVV 589
L++ F N + ++L +M G PD ++ + L N + F L
Sbjct: 223 ALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTH 282
Query: 590 RLVKRQRTI 598
L TI
Sbjct: 283 GLYPNSATI 291
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 74/137 (54%)
Query: 168 NIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEA 227
+I P +T+N +I CK VD A + + + C+PD T+STL++G CK R+D
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 228 VSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDG 287
+ + EM G N + LI C+ GDL A L++ M G P+ +T++ ++ G
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 288 LCRKGKLNKAVSLLNQM 304
LC K +L KA ++L +
Sbjct: 125 LCSKKELRKAFAILEDL 141
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 75/135 (55%)
Query: 276 PNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASV 335
P +TYN+++DG C++ +++ A +L+ M + C P+ VTF TL++G+ K R +G +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 336 LISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCR 395
+ RG N Y++LI G + G + A L EM+ G P+ + + ++ GLC
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 396 EGKADEAREYLIEMK 410
+ + +A L +++
Sbjct: 128 KKELRKAFAILEDLQ 142
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 76/136 (55%)
Query: 206 PDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKL 265
P + TY++++DG CK+ R+D+A +LD M +G P+ F+ LI+ CK + ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 266 VDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVK 325
M +G V N VTY TL+ G C+ G L+ A LLN+M++ P+ +TF ++ G
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 326 QGRASDGASVLISLEE 341
+ ++L L++
Sbjct: 128 KKELRKAFAILEDLQK 143
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 78/143 (54%)
Query: 311 PNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQL 370
P +T+ +++ GF KQ R D +L S+ +G + +S+LI+G K + ++ M++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 371 WKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFE 430
+ EM +G NTV Y+ LI G C+ G D A++ L EM + G P+ T+ ++ G
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 431 AGDCHKAILVWKEMKNNSCNHNE 453
+ KA + ++++ + +H E
Sbjct: 128 KKELRKAFAILEDLQKSEDHHLE 150
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 73/134 (54%)
Query: 381 PNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILV 440
P T+ Y+++IDG C++ + D+A+ L M +KG P+ T+S+L+ G+ +A + +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 441 WKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCN 500
+ EM N V Y+ LI+G C+ G L A + +M+S G+ D + + M+ G C+
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 501 AQLVDQGMKLFNQM 514
+ + + + +
Sbjct: 128 KKELRKAFAILEDL 141
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 69/129 (53%)
Query: 351 YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMK 410
Y+S+I G K+ + + A ++ M KGC P+ V +S LI+G C+ + D E EM
Sbjct: 13 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 72
Query: 411 NKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLM 470
+G + N+ TY++L+ GF + GD A + EM + + + + ++ GLC +L
Sbjct: 73 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR 132
Query: 471 EAMMVWKQM 479
+A + + +
Sbjct: 133 KAFAILEDL 141
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 65/109 (59%), Gaps = 2/109 (1%)
Query: 454 VCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQ 513
+ Y+ +I+G CK ++ +A + M S+G DVV +S++I+G+C A+ VD GM++F +
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70
Query: 514 MLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
M + + TY L++ F Q ++ A D+LN M+ G PD+IT
Sbjct: 71 M--HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT 117
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 415 LPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMM 474
P + TY+S++ GF + A + M + C+ + V +S LING CK ++ M
Sbjct: 7 FPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGME 66
Query: 475 VWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNA 534
++ +M RGI + V Y+++IHGFC +D L N+M+ + PD T++ +L
Sbjct: 67 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI--SCGVAPDYITFHCMLAG 124
Query: 535 FYQQNNISRAMDVL 548
+ + +A +L
Sbjct: 125 LCSKKELRKAFAIL 138
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 72/135 (53%)
Query: 240 FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVS 299
FP +N +I CK+ + A +++D+M+ KGC P+ VT++TL++G C+ +++ +
Sbjct: 7 FPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGME 66
Query: 300 LLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
+ +M V N VT+ TL+HGF + G +L + G + + +++GL
Sbjct: 67 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Query: 360 KEGKFEHAMQLWKEM 374
+ + A + +++
Sbjct: 127 SKKELRKAFAILEDL 141
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
Query: 136 TVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEV 195
T ++NS+++ ++ A + S P+ +TF+ +I CK VD +E+
Sbjct: 9 TTITYNSMIDGFCKQDRVDDAKRMLDSM-ASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 196 FRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCK 255
F +H R ++ TY+TL+ G C+ G +D A LL+EM G P+ F+ +++ LC
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 256 KGDLIRAAKLVDNM 269
K +L +A +++++
Sbjct: 128 KKELRKAFAILEDL 141
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 143/305 (46%), Gaps = 6/305 (1%)
Query: 140 FNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGI 199
+N++LN + + +A+ + + ++PNG T+ L ++ + + G D+ + FR +
Sbjct: 344 YNAILNACVPTLQW-KAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKM 402
Query: 200 HLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDL 259
AP + TY L+ L +EG+I+EAV + +M+ +G V+ L LC G
Sbjct: 403 KSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRW 462
Query: 260 IRAAKLVDNMS-LKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
A V M L+ C P E+T+ L+ G ++ +++ Q + +KC PN T
Sbjct: 463 CDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIF-QYMKDKCDPNIGTANM 521
Query: 319 LVHGFVKQGRASDGASV---LISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM 375
++ + + S+ + ++S +E NEY YS ++ + ++E+ +++ M+
Sbjct: 522 MLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTMV 581
Query: 376 EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCH 435
G + + +++++ R GK + G +P+ ++ L+ GD
Sbjct: 582 LSGYQMDQTKHASMLIEASRAGKWSLLEHAFDAVLEDGEIPHPLFFTELLCHATAKGDFQ 641
Query: 436 KAILV 440
+AI +
Sbjct: 642 RAITL 646
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 145/338 (42%), Gaps = 28/338 (8%)
Query: 200 HLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGT-FPNPFVFNVLISALCKKGD 258
HLR+ + Y+ L+ L R EA+ + ++M + +P+ ++ + L + G
Sbjct: 251 HLRS----RFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGL 306
Query: 259 LIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
L K+++ M K P ++T N R+ + + P+ V +
Sbjct: 307 LKELLKVIERMRQK---PTKLTKN------LRQKNWDPVLE-----------PDLVVYNA 346
Query: 319 LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKG 378
+++ V + + V + L + G R N Y + + + GKF+ +++M G
Sbjct: 347 ILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSG 406
Query: 379 CEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAI 438
P + Y L+ L REGK +EA E + +M+ KG + Y L G A+
Sbjct: 407 EAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAM 466
Query: 439 LVWKEMKN-NSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHG 497
L MK +C E+ ++ LI G + + M +++ M + ++ + M+
Sbjct: 467 LEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYMKDK-CDPNIGTANMMLKV 525
Query: 498 FCNAQLVDQGMKLFNQMLC-QEAELQPDVATYNILLNA 534
+ + + +LF +++ +E L P+ TY+ +L A
Sbjct: 526 YGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEA 563
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 131/313 (41%), Gaps = 20/313 (6%)
Query: 202 RNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTF---------------PNPFVF 246
R PD Y + L + G + E + +++ M+ + T P+ V+
Sbjct: 285 RQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVY 344
Query: 247 NVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA 306
N +++A + + + G PN TY ++ + GK ++ +M +
Sbjct: 345 NAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKS 404
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEH 366
+ P +T+ LV ++G+ + + +E++G G +Y L L G++
Sbjct: 405 SGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCD 464
Query: 367 AM-QLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLM 425
AM ++ + + C P + ++ LI G D+ MK+K PN T + ++
Sbjct: 465 AMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYMKDKCD-PNIGTANMML 523
Query: 426 RGFFEAGDCHKAILVWKEMKNNSCNH---NEVCYSILINGLCKNGKLMEAMMVWKQMLSR 482
+ + +A +++E+ + H NE YS ++ ++ + V++ M+
Sbjct: 524 KVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLS 583
Query: 483 GIKLDVVAYSSMI 495
G ++D ++SM+
Sbjct: 584 GYQMDQTKHASML 596
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 93/201 (46%), Gaps = 6/201 (2%)
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
+Y+++++ +++ ++ E+ + G PN Y ++ + GK D ++ +M
Sbjct: 343 VYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKM 402
Query: 410 KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKL 469
K+ G P + TY L+R + G +A+ ++M+ Y L LC NG+
Sbjct: 403 KSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRW 462
Query: 470 MEAMMVWKQM--LSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVAT 527
+AM+ +M L L++ ++ +I N VD M +F M + + P++ T
Sbjct: 463 CDAMLEVGRMKRLENCRPLEIT-FTGLIAASLNGGHVDDCMAIFQYM---KDKCDPNIGT 518
Query: 528 YNILLNAFYQQNNISRAMDVL 548
N++L + + + S A ++
Sbjct: 519 ANMMLKVYGRNDMFSEAKELF 539
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 131/309 (42%), Gaps = 43/309 (13%)
Query: 138 KSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFR 197
K FN VL V+ ++ H A++ + N + TF++V + L KVG + A+ +F+
Sbjct: 104 KEFNYVLRVLAEKKD-HTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFK 162
Query: 198 GIHLRNCAPDSYTYSTLMDGLCKEGRID-------------------------------- 225
+ +C D +T + ++ LC G +
Sbjct: 163 ILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQR 222
Query: 226 ---EAVSLLDEMQIEGTFPNPFVFNVLISALCKK-------GDLIRAAKLVDNMSLKGCV 275
EA ++ +M+ G P+ F FN L++ LC++ G + A ++ M
Sbjct: 223 NVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQ 282
Query: 276 PNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASV 335
P ++YN L+ L R ++ ++ +L QM + C P+ ++ +V GR G +
Sbjct: 283 PTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQI 342
Query: 336 LISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCR 395
+ + ERG R Y LI L + A+QL+++M VY LI LC+
Sbjct: 343 VDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCK 402
Query: 396 EGKADEARE 404
G ++ RE
Sbjct: 403 GGNFEKGRE 411
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 121/281 (43%), Gaps = 17/281 (6%)
Query: 246 FNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMV 305
FN ++ L +K D L+ ++ + ++ T++ + + L + GK A+ + +
Sbjct: 106 FNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILD 165
Query: 306 ANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR----GNEY-IYSSLISGLFK 360
C + T ++ +G V+ H+ GNE +Y SL+ G
Sbjct: 166 KFSCPQDGFTVTAIISALCSRGHVKRALGVM-----HHHKDVISGNELSVYRSLLFGWSV 220
Query: 361 EGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCRE-------GKADEAREYLIEMKNKG 413
+ + A ++ ++M G P+ +++L+ LC G EA ++EM++
Sbjct: 221 QRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYK 280
Query: 414 HLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAM 473
P S +Y+ L+ ++ + ++MK + C+ + Y ++ L G+ +
Sbjct: 281 IQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGN 340
Query: 474 MVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
+ +M+ RG + + Y +I C + V+ ++LF +M
Sbjct: 341 QIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKM 381
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 130/306 (42%), Gaps = 27/306 (8%)
Query: 358 LFKEGKFEHAMQ-LWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLP 416
+ E K AMQ L ++ ++ + +S + + L + GK ++A + ++ +K P
Sbjct: 112 VLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIG-IFKILDKFSCP 170
Query: 417 -NSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMV 475
+ FT ++++ G +A+ V K+ + Y L+ G + EA V
Sbjct: 171 QDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRV 230
Query: 476 WKQMLSRGIKLDVVAYSSMIHGFCN-------AQLVDQGMKLFNQMLCQEAELQPDVATY 528
+ M S GI D+ ++S++ C + LV + + + +M + ++QP +Y
Sbjct: 231 IQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEM--RSYKIQPTSMSY 288
Query: 529 NILLNAFYQQNNISRAMDVLNIMLDQGCDPD-----FITCDIFLKTLRDNMNPPQD---- 579
NILL+ + + + +L M GCDPD F+ ++L N D
Sbjct: 289 NILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIE 348
Query: 580 -----GREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRK 634
R+F +L+ L +R A ++ E M + + +++ +LCK N K
Sbjct: 349 RGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEK 408
Query: 635 AISECW 640
E W
Sbjct: 409 G-RELW 413
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 63/142 (44%)
Query: 165 KSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRI 224
+S IQP +++N+++ L + V ++ ++ + C PD+ +Y ++ L GR
Sbjct: 277 RSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRF 336
Query: 225 DEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTL 284
+ ++DEM G P + LI LC + A +L + M Y+ L
Sbjct: 337 GKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLL 396
Query: 285 VDGLCRKGKLNKAVSLLNQMVA 306
+ LC+ G K L + ++
Sbjct: 397 IPKLCKGGNFEKGRELWEEALS 418
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 118/519 (22%), Positives = 220/519 (42%), Gaps = 66/519 (12%)
Query: 106 VIFKAYGKAHFPEKAVNLFHRMEAE-----------FHCKQTVKSFNSVLNVIIQEGH-- 152
++ AY KA F + A+NLF M + C+ + ++ + +EGH
Sbjct: 89 ILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSR----LHREGHEL 144
Query: 153 ----FHRALEFYSHVCKS------------LNIQPNGLTFNLVIKALCKVGLVDQAVEVF 196
F L+ + + K+ L N +I A G VD A VF
Sbjct: 145 NPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVF 204
Query: 197 RGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKK 256
GI + D ++ ++ + G ++++ LL M++ G PN + F+ + A
Sbjct: 205 EGILCK----DIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGL 260
Query: 257 GDLIRAAKLVDNMSLKGC-VPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVT 315
G AK V LK C V + L+ + G ++ A + N+M N VP
Sbjct: 261 GAF-DFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVP---- 315
Query: 316 FGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM 375
+ ++ F + G ++ + I + E NE+ SS+++G QL ++
Sbjct: 316 WSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVV 375
Query: 376 EKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCH 435
+ G + + V +ALID + K D A + E+ +K N ++++++ G+ G+
Sbjct: 376 KVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK----NEVSWNTVIVGYENLGEGG 431
Query: 436 KAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLD----VVAY 491
KA +++E N + EV +S + G C + + +M + Q+ IK + V
Sbjct: 432 KAFSMFREALRNQVSVTEVTFSSAL-GACAS---LASMDLGVQVHGLAIKTNNAKKVAVS 487
Query: 492 SSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIM 551
+S+I + + +FN+M DVA++N L++ + +A+ +L+IM
Sbjct: 488 NSLIDMYAKCGDIKFAQSVFNEME------TIDVASWNALISGYSTHGLGRQALRILDIM 541
Query: 552 LDQGCDPDFITCDIFLKTLR--DNMNPPQDGREFLDELV 588
D+ C P+ +T FL L N G+E + ++
Sbjct: 542 KDRDCKPNGLT---FLGVLSGCSNAGLIDQGQECFESMI 577
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/424 (21%), Positives = 180/424 (42%), Gaps = 31/424 (7%)
Query: 133 CKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQA 192
CK V + +++ ++ G+F +L+ S + + PN TF+ +KA +G D A
Sbjct: 209 CKDIV-VWAGIVSCYVENGYFEDSLKLLSCM-RMAGFMPNNYTFDTALKASIGLGAFDFA 266
Query: 193 VEVFRGIH---LRNC-APDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNV 248
+G+H L+ C D L+ + G + +A + +EM P F
Sbjct: 267 ----KGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSF---- 318
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK 308
+I+ C+ G A L M VPNE T +++++G C GK + L+ +V
Sbjct: 319 MIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNG-CAIGKCSGLGEQLHGLVVKV 377
Query: 309 CVPNDVTFG-TLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHA 367
D+ L+ + K + + L + NE ++++I G G+ A
Sbjct: 378 GFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK----NEVSWNTVIVGYENLGEGGKA 433
Query: 368 MQLWKEMMEKGCEPNTVVYSALIDGLCREGKAD---EAREYLIEMKNKGHLPNSFTYSSL 424
+++E + V +S+ + D + I+ N + S +SL
Sbjct: 434 FSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVS---NSL 490
Query: 425 MRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGI 484
+ + + GD A V+ EM+ + ++ LI+G +G +A+ + M R
Sbjct: 491 IDMYAKCGDIKFAQSVFNEMET----IDVASWNALISGYSTHGLGRQALRILDIMKDRDC 546
Query: 485 KLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRA 544
K + + + ++ G NA L+DQG + F M+ ++ ++P + Y ++ + + +A
Sbjct: 547 KPNGLTFLGVLSGCSNAGLIDQGQECFESMI-RDHGIEPCLEHYTCMVRLLGRSGQLDKA 605
Query: 545 MDVL 548
M ++
Sbjct: 606 MKLI 609
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 149/341 (43%), Gaps = 44/341 (12%)
Query: 207 DSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV 266
DS+ Y ++ ++ A ++ ++ +G+ + F N+L++A K G A L
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 267 DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQ 326
D M + N V++ TL G + L +++ N F + + FV
Sbjct: 108 DEMPER----NNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSL 159
Query: 327 GRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVY 386
+A + + + G+ N ++ ++LI+ G + A +++ ++ K + VV+
Sbjct: 160 DKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCK----DIVVW 215
Query: 387 SALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMR-----GFFE-AGDCHKAILV 440
+ ++ G +++ + L M+ G +PN++T+ + ++ G F+ A H IL
Sbjct: 216 AGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQIL- 274
Query: 441 WKEMKNNSCNHNEVCYSI-------LINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSS 493
+ CY + L+ + G + +A V+ +M K DVV +S
Sbjct: 275 ------------KTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEM----PKNDVVPWSF 318
Query: 494 MIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNA 534
MI FC ++ + LF +M +EA + P+ T + +LN
Sbjct: 319 MIARFCQNGFCNEAVDLFIRM--REAFVVPNEFTLSSILNG 357
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 132/275 (48%), Gaps = 4/275 (1%)
Query: 173 GLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLD 232
G FN +I G + VEVF + D T + + L + +++ A
Sbjct: 139 GRFFNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFS 198
Query: 233 EMQIEGT-FPNPFVFNVLISALCKKGDLIRAAKLVDNMSL-KGCVPNEVTYNTLVDGLCR 290
M G + V+++ LC G++ RA +LV+ M L KG N VT+ +++ G C
Sbjct: 199 LMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCV 257
Query: 291 KGKLNKAVSLLNQMVANKCVPNDV-TFGTLVHGFVKQGRASDGASVLISLEERGHRGNEY 349
K + + L+ +++ + V D+ ++ L+ GF G+ + +++ + ++ R Y
Sbjct: 258 KRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESY 317
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
+Y+ +++G + G E ++L+ EM +G PN Y L++GLC+ GK EA +L E+
Sbjct: 318 LYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNEL 377
Query: 410 KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEM 444
+ + YS+L + G K++ V EM
Sbjct: 378 RVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEM 412
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 129/300 (43%)
Query: 69 FYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRME 128
F S+I + + F+ + E+ + MK EK + + E A + F M
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMV 201
Query: 129 AEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGL 188
TV S V+ V+ G RA E + ++ N +TF +I K
Sbjct: 202 ESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWD 261
Query: 189 VDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNV 248
++ V + + + D +Y L+DG G+++EA L+ M + +++N+
Sbjct: 262 FEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNL 321
Query: 249 LISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANK 308
+++ + G + + +L MS +G PN+ TY L++GLC+ GK+ +A+S LN++ N+
Sbjct: 322 IMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNE 381
Query: 309 CVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAM 368
++ + TL + G V+ + G I L LF+ + E M
Sbjct: 382 FEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNRKEAQM 441
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 84/174 (48%)
Query: 342 RGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADE 401
+G + N + S+I K FE + K M ++ + Y LIDG GK +E
Sbjct: 240 KGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEE 299
Query: 402 AREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILIN 461
A ++ M +K S+ Y+ +M G+ G K I ++ EM + N+ Y +L+N
Sbjct: 300 AERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMN 359
Query: 462 GLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQML 515
GLCK GK+ EAM ++ ++D YS++ ++D+ +++ +M+
Sbjct: 360 GLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMI 413
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 135/316 (42%), Gaps = 13/316 (4%)
Query: 133 CKQTV--KSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVD 190
C++ V + FNS++ V G F +E + ++ K+ ++ + T L + L + ++
Sbjct: 133 CEKKVVGRFFNSMIMVYSDNGKFSEVVEVFEYM-KNNEVKIDEKTCTLHLLNLKRCDQME 191
Query: 191 QAVEVFR-----GIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQ-IEGTFPNPF 244
A + F GI + Y+ + ++ LC G I A L++EM ++G N
Sbjct: 192 LARDFFSLMVESGIDVVTV----YSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIV 247
Query: 245 VFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM 304
F +I K+ D ++ M + + + +Y L+DG GK+ +A L+ M
Sbjct: 248 TFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMM 307
Query: 305 VANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKF 364
K + +++G+ + G + + RG N+ Y L++GL K GK
Sbjct: 308 HDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKV 367
Query: 365 EHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSL 424
AM E+ E + +YS L + R G D++ E + EM G +P + L
Sbjct: 368 CEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERL 427
Query: 425 MRGFFEAGDCHKAILV 440
FE +L+
Sbjct: 428 ADSLFEVNRKEAQMLI 443
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 1/205 (0%)
Query: 280 TYNTLVDGLCRKGKLNKAVSLLNQMVANKCV-PNDVTFGTLVHGFVKQGRASDGASVLIS 338
+ +V LC G++ +A L+ +M K V N VTF +++ VK+ + VL
Sbjct: 212 SLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKL 271
Query: 339 LEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGK 398
+E+ + Y LI G GK E A +L M +K + +Y+ +++G R G
Sbjct: 272 MEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGL 331
Query: 399 ADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSI 458
++ E EM ++G PN TY LM G +AG +A+ E++ N +E YS
Sbjct: 332 VEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYST 391
Query: 459 LINGLCKNGKLMEAMMVWKQMLSRG 483
L + G + +++ V +M+ G
Sbjct: 392 LSEECYRVGMIDKSLEVVAEMIRDG 416
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 155/364 (42%), Gaps = 25/364 (6%)
Query: 206 PDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKL 265
PD T+ +L + E R A LL + I+ PF NV++S++ +
Sbjct: 82 PDLRTHLSLTFRVLSERRFSYAKELLKPVAIDDILRYPF--NVIVSSVIDEC-------- 131
Query: 266 VDNMSLKGCVPNEVT--YNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGF 323
GC V +N+++ GK ++ V + M N+ V D TL
Sbjct: 132 -------GCEKKVVGRFFNSMIMVYSDNGKFSEVVEVFEYMKNNE-VKIDEKTCTLHLLN 183
Query: 324 VKQGRASDGASVLISLEERGHRGNEYIYS--SLISGLFKEGKFEHAMQLWKEM-MEKGCE 380
+K+ + A SL +YS +++ L G+ A +L +EM + KG +
Sbjct: 184 LKRCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVK 243
Query: 381 PNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILV 440
N V + ++I + +E L M+ + + + +Y L+ GF G +A +
Sbjct: 244 ANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERL 303
Query: 441 WKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCN 500
M + Y++++NG + G + + + ++ +M SRG+ + Y +++G C
Sbjct: 304 VLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCK 363
Query: 501 AQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDF 560
A V + M N++ E E+ D Y+ L Y+ I ++++V+ M+ G P
Sbjct: 364 AGKVCEAMSFLNELRVNEFEI--DEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGA 421
Query: 561 ITCD 564
C+
Sbjct: 422 TICE 425
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 115/533 (21%), Positives = 206/533 (38%), Gaps = 131/533 (24%)
Query: 166 SLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRID 225
+ QP N +I CK ++ A ++F I PD +T++ G C G I
Sbjct: 42 TFGFQPRAHILNRLIDVYCKSSELNYARQLFDEI----SEPDKIARTTMVSGYCASGDIT 97
Query: 226 EAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLV 285
A + ++ + + ++N +I+ D A L M +G P+ T+ +++
Sbjct: 98 LARGVFEKAPV--CMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155
Query: 286 DGLCR----------------KGKLNKAVSLLNQMVA--NKCVP---------------- 311
GL K S+ N +V+ +KC
Sbjct: 156 AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEIL 215
Query: 312 --NDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQ 369
++ ++ T++ G+VK G G +L +++ Y+++ISG G ++ A++
Sbjct: 216 EKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNM---KLVAYNAMISGYVNRGFYQEALE 272
Query: 370 LWKEMMEKGCEPNTVVYSALIDG-----------------LCRE---------------- 396
+ + M+ G E + Y ++I L RE
Sbjct: 273 MVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYK 332
Query: 397 -GKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVC 455
GK DEAR +M K + ++++L+ G+ +G +A L++KEMK N +
Sbjct: 333 CGKFDEARAIFEKMPAK----DLVSWNALLSGYVSSGHIGEAKLIFKEMKEK----NILS 384
Query: 456 YSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIH------GFCNAQ------- 502
+ I+I+GL +NG E + ++ M G + A+S I +CN Q
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL 444
Query: 503 ----------------------LVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNN 540
+V++ ++F M C D ++N L+ A Q +
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCL------DSVSWNALIAALGQHGH 498
Query: 541 ISRAMDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQDGREFLD--ELVVRL 591
+ A+DV ML +G PD IT L T + GR++ D E V R+
Sbjct: 499 GAEAVDVYEEMLKKGIRPDRITLLTVL-TACSHAGLVDQGRKYFDSMETVYRI 550
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 112/241 (46%), Gaps = 20/241 (8%)
Query: 111 YGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQ 170
Y K E+A +F M C +V S+N+++ + Q GH A++ Y + K I+
Sbjct: 462 YAKCGVVEEARQVFRTMP----CLDSV-SWNALIAALGQHGHGAEAVDVYEEMLKK-GIR 515
Query: 171 PNGLTFNLVIKALCKVGLVDQAVEVFRGIH-LRNCAPDSYTYSTLMDGLCKEGRIDEAVS 229
P+ +T V+ A GLVDQ + F + + P + Y+ L+D LC+ G+ +A S
Sbjct: 516 PDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAES 575
Query: 230 LLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVP-NEVTYNTLVDGL 288
+++ + + P ++ L+S G++ D L G +P ++ TY L +
Sbjct: 576 VIESLPFK---PTAEIWEALLSGCRVHGNMELGIIAADK--LFGLIPEHDGTYMLLSNMH 630
Query: 289 CRKGKLNKAVSLLNQMVANKCVPNDVT-----FGTLVHGF-VKQGRASDGASVLISLEER 342
G+ + V+ + +++ ++ V +V T VH F V + +V I L++
Sbjct: 631 AATGQWEE-VARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDL 689
Query: 343 G 343
G
Sbjct: 690 G 690
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 88/431 (20%), Positives = 164/431 (38%), Gaps = 85/431 (19%)
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRG 198
++N++++ + G + ALE + S I+ + T+ VI+A GL+ +V
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSS-GIELDEFTYPSVIRACATAGLLQLGKQVHAY 311
Query: 199 IHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGD 258
+ LR + ++L+ K G+ DEA ++ ++M + + +N L+S G
Sbjct: 312 V-LRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK----DLVSWNALLSGYVSSGH 366
Query: 259 LIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGT 318
+ A + M K N +++ ++ GL G + + L + M P D F
Sbjct: 367 IGEAKLIFKEMKEK----NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSG 422
Query: 319 LVHGFVKQGRASDG----ASVL-ISLEERGHRGNEYI----------------------- 350
+ G +G A +L I + GN I
Sbjct: 423 AIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLD 482
Query: 351 ---YSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVV---------------------- 385
+++LI+ L + G A+ +++EM++KG P+ +
Sbjct: 483 SVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFD 542
Query: 386 --------------YSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEA 431
Y+ LID LCR GK +A + + K P + + +L+ G
Sbjct: 543 SMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFK---PTAEIWEALLSGCRVH 599
Query: 432 GDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDV--- 488
G+ I+ ++ H+ Y +L N G+ E V K M RG+K +V
Sbjct: 600 GNMELGIIAADKLFGLIPEHDGT-YMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACS 658
Query: 489 -VAYSSMIHGF 498
+ + +H F
Sbjct: 659 WIEMETQVHTF 669
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 103/504 (20%), Positives = 208/504 (41%), Gaps = 77/504 (15%)
Query: 95 ERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFH 154
+R V I + + G F E+A LF M + + S+N++++ +
Sbjct: 99 KRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPS-----RDSFSWNTMISGYAKNRRIG 153
Query: 155 RALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTL 214
AL + + + N ++++ +I C+ G VD AV +FR + +++ +P L
Sbjct: 154 EALLLFEKMP-----ERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCAL 204
Query: 215 MDGLCKEGRIDEAVSLLDEMQ--IEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMS-- 270
+ GL K R+ EA +L + + G + +N LI ++G + A L D +
Sbjct: 205 VAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDL 264
Query: 271 ---------LKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVH 321
+ N V++N+++ + G + A L +QM + +++ T++
Sbjct: 265 CGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMID 320
Query: 322 GFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEP 381
G+V R D ++ + R + + ++ ++SG G E A + EK E
Sbjct: 321 GYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVGNVELA----RHYFEKTPEK 372
Query: 382 NTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRG-------------- 427
+TV ++++I + EA + I M +G P+ T +SL+
Sbjct: 373 HTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMH 432
Query: 428 --------------------FFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNG 467
+ G+ ++ ++ EMK + ++ +I G +G
Sbjct: 433 QIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMK---LKREVITWNAMIGGYAFHG 489
Query: 468 KLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVAT 527
EA+ ++ M S GI + + S+++ +A LVD+ F M+ +++P +
Sbjct: 490 NASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSV-YKIEPQMEH 548
Query: 528 YNILLNAFYQQNNISRAMDVLNIM 551
Y+ L+N Q AM ++ M
Sbjct: 549 YSSLVNVTSGQGQFEEAMYIITSM 572
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 165/365 (45%), Gaps = 35/365 (9%)
Query: 67 LSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHR 126
+S+ S+I+ D S L QMK + ++ + Y E A LF
Sbjct: 282 VSWNSMIKAYLKVGDVVSARLLFDQMKDRDTI----SWNTMIDGYVHVSRMEDAFALFSE 337
Query: 127 M-EAEFHC-KQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALC 184
M + H V + SV NV + +F + E ++ +++N +I A
Sbjct: 338 MPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHT------------VSWNSIIAAYE 385
Query: 185 KVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSL-LDEMQIEGTFPNP 243
K +AV++F +++ PD +T ++L+ G ++ + + + ++ ++ P+
Sbjct: 386 KNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLS--ASTGLVNLRLGMQMHQIVVKTVIPDV 443
Query: 244 FVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQ 303
V N LI+ + G+++ + ++ D M LK V +T+N ++ G G ++A++L
Sbjct: 444 PVHNALITMYSRCGEIMESRRIFDEMKLKREV---ITWNAMIGGYAFHGNASEALNLFGS 500
Query: 304 MVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEE--RGHRGNEYIYSSLISGLFKE 361
M +N P+ +TF ++++ G + + +S+ + E+ YSSL++ +
Sbjct: 501 MKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEH-YSSLVNVTSGQ 559
Query: 362 GKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCR----EGKADEAREYLIEMKNKGHLPN 417
G+FE AM + M EP+ V+ AL+D CR G A A E + ++ + P
Sbjct: 560 GQFEEAMYIITSM---PFEPDKTVWGALLDA-CRIYNNVGLAHVAAEAMSRLEPESSTPY 615
Query: 418 SFTYS 422
Y+
Sbjct: 616 VLLYN 620
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 140/315 (44%), Gaps = 69/315 (21%)
Query: 277 NEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQG--RASDGAS 334
N VT+NT++ G ++ ++N+A L + M VT+ T++ G+V G R + A
Sbjct: 70 NTVTWNTMISGYVKRREMNQARKLFDVMPKRDV----VTWNTMISGYVSCGGIRFLEEAR 125
Query: 335 VLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLC 394
L +E R + + ++++ISG K + A+ L+++M E+ N V +SA+I G C
Sbjct: 126 KL--FDEMPSR-DSFSWNTMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMITGFC 178
Query: 395 REGKADEAREYLIEMKNKGHLP----------NS-----------------------FTY 421
+ G+ D A +M K P N + Y
Sbjct: 179 QNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAY 238
Query: 422 SSLMRGFFEAGDCHKAILVWK------------EMKNNSCNHNEVCYSILINGLCKNGKL 469
++L+ G+ + G A ++ E + C N V ++ +I K G +
Sbjct: 239 NTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCK-NVVSWNSMIKAYLKVGDV 297
Query: 470 MEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYN 529
+ A +++ QM R D +++++MI G+ + ++ LF++M ++A ++N
Sbjct: 298 VSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAH------SWN 347
Query: 530 ILLNAFYQQNNISRA 544
++++ + N+ A
Sbjct: 348 MMVSGYASVGNVELA 362
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 132/289 (45%), Gaps = 65/289 (22%)
Query: 324 VKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNT 383
++ G ++ + LE R N ++++ISG K + A +L+ M ++ +
Sbjct: 51 IRSGYIAEARDIFEKLEAR----NTVTWNTMISGYVKRREMNQARKLFDVMPKR----DV 102
Query: 384 VVYSALIDGLCREGKA---DEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILV 440
V ++ +I G G +EAR+ EM ++ +SF++++++ G+ + +A+L+
Sbjct: 103 VTWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIGEALLL 158
Query: 441 WKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM--------------------- 479
+++M N V +S +I G C+NG++ A++++++M
Sbjct: 159 FEKMPE----RNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERL 214
Query: 480 ------------LSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM--LCQE---AELQ 522
L G + V AY+++I G+ V+ LF+Q+ LC + E +
Sbjct: 215 SEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFR 274
Query: 523 ----PDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
+V ++N ++ A+ + ++ A ++ DQ D D I+ + +
Sbjct: 275 ERFCKNVVSWNSMIKAYLKVGDVVSA----RLLFDQMKDRDTISWNTMI 319
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 168/361 (46%), Gaps = 28/361 (7%)
Query: 200 HLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDL 259
H ++ + + ++++ ++ L + GR+ EA +M + G PN F L+S GD
Sbjct: 28 HNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGC---GDF 84
Query: 260 IRAAK----LVDNMSLK-GCVPNEVTYNTLVDGL-CRKGKLNKAVSLLNQMVANKCVPND 313
++ L+ + K G N V T + G+ ++G+ KA + + M N
Sbjct: 85 TSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDK----NS 140
Query: 314 VTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKE 373
VT+ T++ G+++ G+ + A + + ER + ++++I+G K+G E A+ ++E
Sbjct: 141 VTWNTMIDGYMRSGQVDNAAKMFDKMPER----DLISWTAMINGFVKKGYQEEALLWFRE 196
Query: 374 MMEKGCEPNTVVYSALIDGLCREGKAD---EAREYLIEMKNKGHLPNSFTYSSLMRGFFE 430
M G +P+ V A ++ G Y++ K ++ S +SL+ +
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVS---NSLIDLYCR 253
Query: 431 AGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVA 490
G A V+ M+ + V ++ +I G NG E+++ +++M +G K D V
Sbjct: 254 CGCVEFARQVFYNMEKRTV----VSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVT 309
Query: 491 YSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNI 550
++ + + LV++G++ F M C + + P + Y L++ + + + A+ ++
Sbjct: 310 FTGALTACSHVGLVEEGLRYFQIMKC-DYRISPRIEHYGCLVDLYSRAGRLEDALKLVQS 368
Query: 551 M 551
M
Sbjct: 369 M 369
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 32/212 (15%)
Query: 64 LGDLSFYSLIEKLAASSDFASLEELLQQMKRERRVFIEKNFIVIFKAYGKAHFPEKAVNL 123
LG LSF + + S DF + V + + I ++ G F A +
Sbjct: 219 LGALSFGLWVHRYVLSQDF------------KNNVRVSNSLIDLYCRCGCVEF---ARQV 263
Query: 124 FHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKAL 183
F+ ME K+TV S+NSV+ G+ H +L ++ + + +P+ +TF + A
Sbjct: 264 FYNME-----KRTVVSWNSVIVGFAANGNAHESLVYFRKM-QEKGFKPDAVTFTGALTAC 317
Query: 184 CKVGLVDQAVEVFRGIHLRNC----APDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGT 239
VGLV++ + F+ + C +P Y L+D + GR+++A+ L+ M ++
Sbjct: 318 SHVGLVEEGLRYFQ---IMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK-- 372
Query: 240 FPNPFVFNVLISALCKKG-DLIRAAKLVDNMS 270
PN V L++A G +++ A +L+ +++
Sbjct: 373 -PNEVVIGSLLAACSNHGNNIVLAERLMKHLT 403
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 194/427 (45%), Gaps = 36/427 (8%)
Query: 120 AVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLV 179
A+ +FH M A K T+ ++NS+L I ++ R +E +H +P+ ++N++
Sbjct: 80 ALRVFHGMRA----KNTI-TWNSLLIGISKDPS--RMME--AHQLFDEIPEPDTFSYNIM 130
Query: 180 IKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGT 239
+ + ++A F + ++ A +++T++ G + G +++A L M +
Sbjct: 131 LSCYVRNVNFEKAQSFFDRMPFKDAA----SWNTMITGYARRGEMEKARELFYSMMEK-- 184
Query: 240 FPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVS 299
N +N +IS + GDL +A+ ++G V + ++ G + K+ A +
Sbjct: 185 --NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVV----AWTAMITGYMKAKKVELAEA 238
Query: 300 LLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLF 359
+ M NK N VT+ ++ G+V+ R DG + ++ E G R N SS + G
Sbjct: 239 MFKDMTVNK---NLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCS 295
Query: 360 KEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSF 419
+ + Q+ + + + + ++LI C+ G+ +A + MK K +
Sbjct: 296 ELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK----DVV 351
Query: 420 TYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQM 479
+++++ G+ + G+ KA+ +++EM +N + + + ++ C + L+ M + +
Sbjct: 352 AWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLA-CNHAGLVNIGMAYFES 410
Query: 480 LSRGIKLDVVA--YSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQ 537
+ R K++ Y+ M+ A +++ +KL M +P A + LL A
Sbjct: 411 MVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM-----PFRPHAAVFGTLLGACRV 465
Query: 538 QNNISRA 544
N+ A
Sbjct: 466 HKNVELA 472
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 156/355 (43%), Gaps = 65/355 (18%)
Query: 244 FVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCR-KGKLNKAVSLLN 302
F N +I+ + GD+ A ++ M K N +T+N+L+ G+ + ++ +A L +
Sbjct: 62 FPLNKIIARCVRSGDIDGALRVFHGMRAK----NTITWNSLLIGISKDPSRMMEAHQLFD 117
Query: 303 QMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEG 362
++ P+ ++ ++ +V+ S +R + ++++I+G + G
Sbjct: 118 EIPE----PDTFSYNIMLSCYVRNVNFEKAQSFF----DRMPFKDAASWNTMITGYARRG 169
Query: 363 KFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYS 422
+ E A +L+ MMEK N V ++A+I G G ++A + +G + ++
Sbjct: 170 EMEKARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVV----AWT 221
Query: 423 SLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSR 482
+++ G+ +A A ++K+M + N N V ++ +I+G +N + + + +++ ML
Sbjct: 222 AMITGYMKAKKVELAEAMFKDM---TVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEE 278
Query: 483 GIKL-----------------------------------DVVAYSSMIHGFCNAQLVDQG 507
GI+ DV A +S+I +C +
Sbjct: 279 GIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDA 338
Query: 508 MKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFIT 562
KLF M + DV +N +++ + Q N +A+ + M+D PD+IT
Sbjct: 339 WKLFEVMK------KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWIT 387
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 125/285 (43%), Gaps = 10/285 (3%)
Query: 138 KSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFR 197
K+ S ++ +++ G + +F+ + ++ + + LV+K LC+ G A ++ +
Sbjct: 176 KTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVK 235
Query: 198 GIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLIS---ALC 254
PD L+ G C ++DEA L EM G +N+++ LC
Sbjct: 236 NTA-NEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLC 294
Query: 255 KKGDLIR----AAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCV 310
+K D + K++ M +G N T+N L++ LC+ + +A++L +M C
Sbjct: 295 RKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQ 354
Query: 311 PNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRG--NEYIYSSLISGLFKEGKFEHAM 368
P+ T+ L+ + R +G ++ ++ G+ N+ Y + L + EHAM
Sbjct: 355 PDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAM 414
Query: 369 QLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKG 413
++K M GC+P Y L+ +C + A E KG
Sbjct: 415 SVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKG 459
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 128/292 (43%), Gaps = 11/292 (3%)
Query: 210 TYSTLMDGLCKEGRIDEAVSLLDEMQIE-GTFPNPFVFNVLISALCKKGDLIRAAKLVDN 268
T + +D L + GR + ++M+ + G + +++ LC+KG A K+V N
Sbjct: 177 TLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKN 236
Query: 269 MSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGR 328
+ P+E + L+ G C KL++A L +M + ++ K R
Sbjct: 237 TA-NEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCR 295
Query: 329 ASDG-------ASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEP 381
D VL+ +E RG N ++ LI+ L K + E AM L+ M E GC+P
Sbjct: 296 KKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQP 355
Query: 382 NTVVYSALIDGLCREGKADEAREYLIEMKNKGH--LPNSFTYSSLMRGFFEAGDCHKAIL 439
+ Y LI L + + E E + +MK+ G+ L N Y ++ A+
Sbjct: 356 DAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMS 415
Query: 440 VWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAY 491
V+K MK N C Y +L+ +C N +L A ++K+ +GI + Y
Sbjct: 416 VFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEY 467
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 109/289 (37%), Gaps = 30/289 (10%)
Query: 280 TYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLV-HGFVKQGRASDGASVLIS 338
T + +D L R G+ + +M + + D TLV ++G AS A ++
Sbjct: 177 TLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASI-AEKMVK 235
Query: 339 LEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGK 398
+E I LISG K + A +L EM G E T Y+ ++D +C+
Sbjct: 236 NTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCK--- 292
Query: 399 ADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSI 458
L K+ L + K +L EM+ N +++
Sbjct: 293 -------LCRKKDPFKL---------------QPEVEKVLL---EMEFRGVPRNTETFNV 327
Query: 459 LINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQE 518
LIN LCK + EAM ++ +M G + D Y +I A + +G ++ ++M
Sbjct: 328 LINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAG 387
Query: 519 AELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFL 567
+ Y L + AM V M GC P T D+ +
Sbjct: 388 YGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLM 436
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 172/413 (41%), Gaps = 67/413 (16%)
Query: 156 ALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLR-NCAPDSYTYSTL 214
A+ + + ++PN TF V+KA K G + + ++ G+ L+ D + S L
Sbjct: 111 AITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQI-HGLALKYGFGGDEFVMSNL 169
Query: 215 -----MDGLCKEGRI--------DEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIR 261
M G K+ R+ + V + D + +G ++NV+I + GD
Sbjct: 170 VRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEI---VLWNVMIDGYMRLGDCKA 226
Query: 262 AAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVH 321
A L D M + V++NT++ G G AV + +M PN VT +++
Sbjct: 227 ARMLFDKMRQRSV----VSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLP 282
Query: 322 GFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEP 381
+ G G + + E+ G R ++ + S+LI K G E A+ +++ + +
Sbjct: 283 AISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE---- 338
Query: 382 NTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVW 441
N + +SA+I+G G+A +A + +M+ G P+ Y +L+
Sbjct: 339 NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLL---------------- 382
Query: 442 KEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLS-RGIKLDVVAYSSMIHGFCN 500
+C+H GL + G+ + QM+S G++ + Y M+
Sbjct: 383 -----TACSH---------GGLVEEGR-----RYFSQMVSVDGLEPRIEHYGCMVDLLGR 423
Query: 501 AQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLD 553
+ L+D+ + M ++PD + LL A Q N+ V NI++D
Sbjct: 424 SGLLDEAEEFILNM-----PIKPDDVIWKALLGACRMQGNVEMGKRVANILMD 471
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 162/391 (41%), Gaps = 22/391 (5%)
Query: 170 QPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVS 229
+PN L N +I K G A +VF +HLRN Y+++ ++ G K G + A
Sbjct: 79 RPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNL----YSWNNMVSGYVKSGMLVRARV 134
Query: 230 LLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLC 289
+ D M +N ++ + G+L A G NE ++ L+
Sbjct: 135 VFDSMPERDVVS----WNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACV 190
Query: 290 RKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEY 349
+ +L Q++ + N V +++ + K G+ + + + +
Sbjct: 191 KSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK----DIH 246
Query: 350 IYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEM 409
I+++LISG K G E A +L+ EM EK N V ++ALI G R+G + A + +M
Sbjct: 247 IWTTLISGYAKLGDMEAAEKLFCEMPEK----NPVSWTALIAGYVRQGSGNRALDLFRKM 302
Query: 410 KNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKL 469
G P FT+SS + + M + N + S LI+ K+G L
Sbjct: 303 IALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSL 362
Query: 470 MEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYN 529
+ V++ K D V +++MI L + +++ + M+ + +QP+ T
Sbjct: 363 EASERVFRICDD---KHDCVFWNTMISALAQHGLGHKALRMLDDMI--KFRVQPNRTTLV 417
Query: 530 ILLNAFYQQNNISRAMDVLNIMLDQ-GCDPD 559
++LNA + + M Q G PD
Sbjct: 418 VILNACSHSGLVEEGLRWFESMTVQHGIVPD 448
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 163/395 (41%), Gaps = 52/395 (13%)
Query: 172 NGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLL 231
N ++N ++ K G++ +A VF + R D +++T++ G ++G + EA+
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPER----DVVSWNTMVIGYAQDGNLHEALWFY 167
Query: 232 DEMQIEGTFPNPFVFNVLISALCKKGDL---------IRAAKLVDNM------------- 269
E + G N F F L++A K L + A + N+
Sbjct: 168 KEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKC 227
Query: 270 ----SLKGCVPNEVT------YNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTL 319
S K C +E+T + TL+ G + G + A L +M N V++ L
Sbjct: 228 GQMESAKRCF-DEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEK----NPVSWTAL 282
Query: 320 VHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGC 379
+ G+V+QG + + + G + ++ +SS + H ++ M+
Sbjct: 283 IAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNV 342
Query: 380 EPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAIL 439
PN +V S+LID + G EA E + + + H + +++++ + G HKA+
Sbjct: 343 RPNAIVISSLIDMYSKSGSL-EASERVFRICDDKH--DCVFWNTMISALAQHGLGHKALR 399
Query: 440 VWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLS--RGIKLDVVAYSSMIHG 497
+ +M N +++N C + L+E + W + ++ GI D Y+ +I
Sbjct: 400 MLDDMIKFRVQPNRTTLVVILNA-CSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDL 458
Query: 498 FCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILL 532
A + M+ +M +PD +N +L
Sbjct: 459 LGRAGCFKELMRKIEEM-----PFEPDKHIWNAIL 488
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 101/245 (41%), Gaps = 37/245 (15%)
Query: 345 RGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEARE 404
R N + + LI K GK A +++ +M + N ++ ++ G + G AR
Sbjct: 79 RPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR----NLYSWNNMVSGYVKSGMLVRARV 134
Query: 405 YLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLC 464
M + + ++++++ G+ + G+ H+A+ +KE + + NE ++ L+
Sbjct: 135 VFDSMPER----DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACV 190
Query: 465 KNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM---------- 514
K+ +L Q+L G +VV S+I + ++ + F++M
Sbjct: 191 KSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTT 250
Query: 515 -----------------LCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCD 557
C+ E P ++ L+ + +Q + +RA+D+ M+ G
Sbjct: 251 LISGYAKLGDMEAAEKLFCEMPEKNP--VSWTALIAGYVRQGSGNRALDLFRKMIALGVK 308
Query: 558 PDFIT 562
P+ T
Sbjct: 309 PEQFT 313
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 180/430 (41%), Gaps = 60/430 (13%)
Query: 183 LCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPN 242
LC + +A++ + DS TYS L+ + E + + G P
Sbjct: 36 LCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM 95
Query: 243 PFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLN 302
F+ NVLI+ K L A +L D M + N +++ T++ + KA+ LL
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQR----NVISWTTMISAYSKCKIHQKALELLV 151
Query: 303 QMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLE----ERGHRGNEYIYSSLISGL 358
M+ + PN T+ +++ R+ +G S + L + G + ++ S+LI
Sbjct: 152 LMLRDNVRPNVYTYSSVL-------RSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVF 204
Query: 359 FKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNS 418
K G+ E A+ ++ EM+ + +V++++I G + ++D A E MK G +
Sbjct: 205 AKLGEPEDALSVFDEMVTG----DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQ 260
Query: 419 FTYSSLMRG---------------------------------FFEAGDCHKAILVWKEMK 445
T +S++R + + G A+ V+ +MK
Sbjct: 261 ATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK 320
Query: 446 NNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVD 505
+ + +S +I+GL +NG EA+ ++++M S G K + + ++ +A L++
Sbjct: 321 ER----DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLE 376
Query: 506 QGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDI 565
G F M + + P Y +++ + + A+ +LN M C+PD +T
Sbjct: 377 DGWYYFRSMK-KLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM---ECEPDAVTWRT 432
Query: 566 FLKTLRDNMN 575
L R N
Sbjct: 433 LLGACRVQRN 442
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 142/323 (43%), Gaps = 19/323 (5%)
Query: 103 NFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSH 162
+I + K YGK EKA LF RM E + VK+++ +L V + A +F+
Sbjct: 146 TWIEMIKGYGKRIEIEKARELFERMPFEL---KNVKAWSVMLGVYVNNRKMEDARKFFED 202
Query: 163 VCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEG 222
+ + N ++L++ ++G V +A R I R A D ++TL+ G + G
Sbjct: 203 IP-----EKNAFVWSLMMSGYFRIGDVHEA----RAIFYRVFARDLVIWNTLIAGYAQNG 253
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
D+A+ MQ EG P+ + ++SA + G L ++ ++ +G N+ N
Sbjct: 254 YSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSN 313
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEER 342
L+D + G L A S+ + V + +++ G+ + + ++E
Sbjct: 314 ALIDMYAKCGDLENATSVFESI----SVRSVACCNSMISCLAIHGKGKEALEMFSTMESL 369
Query: 343 GHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEA 402
+ +E + ++++ G ++++ EM + +PN + LI L R GK EA
Sbjct: 370 DLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEA 429
Query: 403 REYLIEMKNKGHLPNSFTYSSLM 425
+ EM K PN +L+
Sbjct: 430 YRLVKEMHVK---PNDTVLGALL 449
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 166/374 (44%), Gaps = 46/374 (12%)
Query: 207 DSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV 266
D S+L+ K G + A + DEM N +N +I GD + A+ L
Sbjct: 80 DVMVGSSLISMYGKCGCVVSARKVFDEMPER----NVATWNAMIGGYMSNGDAVLASGLF 135
Query: 267 DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM-----------------VANKC 309
+ +S+ N VT+ ++ G ++ ++ KA L +M V N+
Sbjct: 136 EEISV---CRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRK 192
Query: 310 ----------VP--NDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISG 357
+P N + ++ G+ + G + ++ + R + I+++LI+G
Sbjct: 193 MEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFAR----DLVIWNTLIAG 248
Query: 358 LFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPN 417
+ G + A+ + M +G EP+ V S+++ + G+ D RE + ++G N
Sbjct: 249 YAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELN 308
Query: 418 SFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWK 477
F ++L+ + + GD A V++ + S C + +I+ L +GK EA+ ++
Sbjct: 309 QFVSNALIDMYAKCGDLENATSVFESISVRSV----ACCNSMISCLAIHGKGKEALEMFS 364
Query: 478 QMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQ 537
M S +K D + + +++ + + +G+K+F++M Q +++P+V + L++ +
Sbjct: 365 TMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ--DVKPNVKHFGCLIHLLGR 422
Query: 538 QNNISRAMDVLNIM 551
+ A ++ M
Sbjct: 423 SGKLKEAYRLVKEM 436
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 128/304 (42%), Gaps = 25/304 (8%)
Query: 315 TFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEM 374
T+ T++ F + GR SV ++E+G + Y+SLI + G + AM+LW+EM
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 375 MEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDC 434
+ GCEP V Y+A + L +G+ +EA E EM PN TY+ LM G C
Sbjct: 184 RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKC 243
Query: 435 HKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSM 494
+A+ ++ +M+ ++ +ILI K G+ V M G+ L +
Sbjct: 244 EEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVLRYPIFVEA 303
Query: 495 IHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQ 554
+ A D ++ N + E+ D+ + ++ SR + + +M
Sbjct: 304 LETLKAAGESDDLLREVNSHISVESLCSSDIDETPTAEVNDTKNSDDSRVISSVLLM--- 360
Query: 555 GCDPDFITCDIFLKTLRD-NMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLL 613
+ + DI L +RD N+ LD VV S IIE DRC
Sbjct: 361 --KQNLVAVDILLNQMRDRNIK--------LDSFVV-----------SAIIETNCDRCRT 399
Query: 614 PEAS 617
AS
Sbjct: 400 EGAS 403
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 206/452 (45%), Gaps = 37/452 (8%)
Query: 103 NFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSH 162
+ + +G+A + ++FH M+ + TV ++ S+++ + G A+ +
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTV-TYTSLIHWVSSSGDVDGAMRLWEE 182
Query: 163 VCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEG 222
+ + +P +++ +K L G V++A EV++ + +P+ +TY+ LM+ L G
Sbjct: 183 M-RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATG 241
Query: 223 RIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYN 282
+ +EA+ + +MQ G P+ N+LI+ K G+ +++ M G V +
Sbjct: 242 KCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVLRYPIFV 301
Query: 283 TLVDGLCRKGKLNKAVSLLNQMVANKCV-PNDVTFGTLVHGFVKQGRASDGASVLISLEE 341
++ L G+ + + +N ++ + + +D+ V + SD + V+ S+
Sbjct: 302 EALETLKAAGESDDLLREVNSHISVESLCSSDIDETPTAE--VNDTKNSDDSRVISSV-- 357
Query: 342 RGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALID---GLCREGK 398
L + L +M ++ + ++ V SA+I+ CR
Sbjct: 358 ----------------LLMKQNLVAVDILLNQMRDRNIKLDSFVVSAIIETNCDRCRTEG 401
Query: 399 ADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCY-- 456
A A +Y +EM HL S Y +L+ F + + K I V KEM H+ CY
Sbjct: 402 ASLAFDYSLEMGI--HLKKS-AYLALIGNFLRSNELPKVIEVVKEMVK--AQHSLGCYQG 456
Query: 457 SILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLC 516
++LI+ L + A V+ +L K V AY++++ + +A ++ MK+ +M
Sbjct: 457 AMLIHRLGFGRRPRLAADVF-DLLPDDQK-GVAAYTALMDVYISAGSPEKAMKILREM-- 512
Query: 517 QEAELQPDVATYNILLNAFYQQNNISRAMDVL 548
+E E+ P + TY++LL+ + ++ + + +L
Sbjct: 513 REREIMPSLGTYDVLLSGLEKTSDFQKEVALL 544
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 169/416 (40%), Gaps = 57/416 (13%)
Query: 207 DSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLV 266
D +TY+T++D + GRI S+ M+ +G + + LI + GD+ A +L
Sbjct: 121 DHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLW 180
Query: 267 DNMSLKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQ 326
+ M GC P V+Y + L G++ +A + +M+ ++ PN T+ L+ V
Sbjct: 181 EEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVAT 240
Query: 327 GRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVY 386
G+ + + ++E G + ++ + LI+ K G+ ++ M E G ++
Sbjct: 241 GKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVLRYPIF 300
Query: 387 SALIDGLCREGKADE-AREY------------------LIEMKNKGHLPNSFTYSS--LM 425
++ L G++D+ RE E+ + + +S SS LM
Sbjct: 301 VEALETLKAAGESDDLLREVNSHISVESLCSSDIDETPTAEVNDTKNSDDSRVISSVLLM 360
Query: 426 RGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIK 485
+ A D ++ +M++ + + S +I C + A + + L GI
Sbjct: 361 KQNLVAVD-----ILLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGASLAFDYSLEMGIH 415
Query: 486 LDVVAYSSMIHGFCNAQLVDQGMKLFNQML-------CQEA------------------- 519
L AY ++I F + + + +++ +M+ C +
Sbjct: 416 LKKSAYLALIGNFLRSNELPKVIEVVKEMVKAQHSLGCYQGAMLIHRLGFGRRPRLAADV 475
Query: 520 -ELQPD----VATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLKTL 570
+L PD VA Y L++ + + +AM +L M ++ P T D+ L L
Sbjct: 476 FDLLPDDQKGVAAYTALMDVYISAGSPEKAMKILREMREREIMPSLGTYDVLLSGL 531
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/440 (19%), Positives = 170/440 (38%), Gaps = 48/440 (10%)
Query: 235 QIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKL 294
QI+G + F + ++ + G + + M KG + + VTY +L+ + G +
Sbjct: 114 QIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDV 173
Query: 295 NKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSL 354
+ A+ L +M N C P V++ + GR + V + N + Y+ L
Sbjct: 174 DGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVL 233
Query: 355 ISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGH 414
+ L GK E A+ ++ +M E G +P+ + LI + G+ L+ MK G
Sbjct: 234 MEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGV 293
Query: 415 LPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYS----------------- 457
+ + + AG+ + +E+ N+ + +C S
Sbjct: 294 VLRYPIFVEALETLKAAGESDDLL---REV-NSHISVESLCSSDIDETPTAEVNDTKNSD 349
Query: 458 ---ILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQM 514
++ + L L+ ++ QM R IKLD S++I C+ + F+
Sbjct: 350 DSRVISSVLLMKQNLVAVDILLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGASLAFDYS 409
Query: 515 LCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQ----GC-------------D 557
L E + + Y L+ F + N + + ++V+ M+ GC
Sbjct: 410 L--EMGIHLKKSAYLALIGNFLRSNELPKVIEVVKEMVKAQHSLGCYQGAMLIHRLGFGR 467
Query: 558 PDFITCDIFLKTLRDNMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMLDRCLLPEAS 617
+ D+F D + Q G L+ + A KI+ M +R ++P
Sbjct: 468 RPRLAADVF-----DLLPDDQKGVAAYTALMDVYISAGSPEKAMKILREMREREIMPSLG 522
Query: 618 TWAIVVQQLCKPRNIRKAIS 637
T+ +++ L K + +K ++
Sbjct: 523 TYDVLLSGLEKTSDFQKEVA 542
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/414 (20%), Positives = 169/414 (40%), Gaps = 4/414 (0%)
Query: 95 ERRVFIEKNFIVIFKAYGKAHFPEKAVNLFHRMEAEFHCKQTVKSFNSVLNVIIQEGHFH 154
++R++ + F I + + P K N+ +++ V + L+ +I + +
Sbjct: 48 KKRLWKDGEFPGITEPVNQRRTPIK--NVKKKLDRRSKANGWVNTVTETLSDLIAKKQWL 105
Query: 155 RALEFYSHVCKSLNIQPNGLTFNLVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTL 214
+ALE + + + QP T+ ++ L K G ++A ++F + P Y+ L
Sbjct: 106 QALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTAL 165
Query: 215 MDGLCKEGRIDEAVSLLDEMQ-IEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKG 273
+ + ID+A S+LD+M+ P+ F ++ L+ A L M +
Sbjct: 166 LAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERL 225
Query: 274 CVPNEVTYNTLVDGLCRKGKLNKAVSLLNQM-VANKCVPNDVTFGTLVHGFVKQGRASDG 332
PN VT N ++ G R G+ ++ +L+ M V+ C P+ T ++ F G+
Sbjct: 226 ITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMM 285
Query: 333 ASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDG 392
S G ++ LI K+ ++ + + M + T Y+ +I+
Sbjct: 286 ESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEA 345
Query: 393 LCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHN 452
G A +M+++G ++ T+ L+ G+ AG HK I + N
Sbjct: 346 FADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPEN 405
Query: 453 EVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQ 506
Y+ +I+ K L+E V+ +M R D + M+ + + D+
Sbjct: 406 TAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDK 459
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 166/368 (45%), Gaps = 9/368 (2%)
Query: 213 TLMDGLCKEGRIDEAVSLLDEMQIEGTF--PNPFVFNVLISALCKKGDLIRAAKLVDNMS 270
TL D + K+ + +A+ + D ++ E TF P + L+ L K G RA KL D M
Sbjct: 94 TLSDLIAKKQWL-QALEVFDMLR-EQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEML 151
Query: 271 LKGCVPNEVTYNTLVDGLCRKGKLNKAVSLLNQMVA-NKCVPNDVTFGTLVHGFVKQGRA 329
+G P Y L+ R ++ A S+L++M + +C P+ T+ TL+ V +
Sbjct: 152 EEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQF 211
Query: 330 SDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEHAMQLWKEMM-EKGCEPNTVVYSA 388
S+ ++ER N + ++SG + G+F+ ++ +M+ C+P+ +
Sbjct: 212 DLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNI 271
Query: 389 LIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNS 448
++ GK D + + +N G P + T++ L+ + + K V + M+
Sbjct: 272 ILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLE 331
Query: 449 CNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGM 508
Y+ +I G + + QM S G+K D + +I+G+ NA L + +
Sbjct: 332 FPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVI 391
Query: 509 KLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRAMDVLNIMLDQGCDPDFITCDIFLK 568
+ L + E+ + A YN +++A + +++ V M ++ C D T +I ++
Sbjct: 392 S--SVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVE 449
Query: 569 TL-RDNMN 575
++ MN
Sbjct: 450 AYEKEGMN 457
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 130/593 (21%), Positives = 238/593 (40%), Gaps = 54/593 (9%)
Query: 70 YSLIEKLAASSDFASLEELLQQMKRERRVFIEKN------FIVIFKAYGKAHFPEKAVNL 123
+ L+E L ++ SL + R++F E + + V+ A+ K+ A++L
Sbjct: 52 FGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSL 111
Query: 124 FHRMEA------EFHCKQTVKSFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTFN 177
F M A EF V+S L I G H + V K+ + N + +
Sbjct: 112 FEEMMASGTHPNEFTFSSVVRSCAG-LRDISYGGRVHGS------VIKT-GFEGNSVVGS 163
Query: 178 LVIKALCKVGLVDQAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIE 237
+ K G +A E+F L+N D+ +++ ++ L + EA+ EM
Sbjct: 164 SLSDLYSKCGQFKEACELFSS--LQNA--DTISWTMMISSLVGARKWREALQFYSEMVKA 219
Query: 238 GTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLKGCVPNEVTYNTLVDGLCRKGKLNKA 297
G PN F F L+ A G L + N+ ++G N V +LVD + K+ A
Sbjct: 220 GVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDA 278
Query: 298 VSLLNQMVANKCVPNDVTFGT-LVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLIS 356
V +LN DV T +V GFV+ RA + + + G + N + YS+++S
Sbjct: 279 VRVLNS-----SGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS 333
Query: 357 GLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGL--CREGKADEAREYLIEMKNKGH 414
+ Q+ + ++ G E +T V +AL+D C + + +R + +
Sbjct: 334 LCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVS---- 389
Query: 415 LPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMM 474
PN ++++L+ G + G + EM N V S ++ K + +
Sbjct: 390 -PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLE 448
Query: 475 VWKQMLSRGIKLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNA 534
+ +L R + ++V +S++ + +++ VD + M + D TY L+
Sbjct: 449 IHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSM------KRRDNITYTSLVTR 502
Query: 535 FYQQNNISRAMDVLNIM------LDQGCDPDFITCDIFLKTLRDNMN----PPQDGREFL 584
F + A+ V+N M +DQ P FI+ L L + + G
Sbjct: 503 FNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGA 562
Query: 585 DELVVRLVKRQRTIGASKIIEVMLDRCLLPEASTWAIVVQQLCKPRNIRKAIS 637
++ LV G+ + + + + P+ +W +V L I A+S
Sbjct: 563 ASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALS 615
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 101/464 (21%), Positives = 196/464 (42%), Gaps = 85/464 (18%)
Query: 139 SFNSVLNVIIQEGHFHRALEFYSHVCKSLNIQPNGLTF--------------------NL 178
S+ +++ ++ + AL+FYS + K+ + PN TF N+
Sbjct: 192 SWTMMISSLVGARKWREALQFYSEMVKA-GVPPNEFTFVKLLGASSFLGLEFGKTIHSNI 250
Query: 179 VIKAL-----CKVGLVD---QAVEVFRGIHLRNCA--PDSYTYSTLMDGLCKEGRIDEAV 228
+++ + K LVD Q ++ + + N + D + +++++ G + R EAV
Sbjct: 251 IVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAV 310
Query: 229 SLLDEMQIEGTFPNPFVFNVLISALCKKGDLIRAAKLVDNMSLK-GCVPNEVTYNTLVDG 287
EM+ G PN F ++ ++S LC + K + + ++K G + N LVD
Sbjct: 311 GTFLEMRSLGLQPNNFTYSAILS-LCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDM 369
Query: 288 L--CRKGKLNKAVSLLNQMVANKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHR 345
C ++ +A + MV+ PN V++ TL+ G V G D +L+ + +R
Sbjct: 370 YMKCSASEV-EASRVFGAMVS----PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVE 424
Query: 346 GNEYIYSSLISGLFKEGKFEHAMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREY 405
N S ++ K +++ ++ + + VV ++L+D K D A
Sbjct: 425 PNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNV 484
Query: 406 LIEMKNKGHLPNSFTYSSLMRGFFEAGDCHKAILVWKEMKNNSCNHNEV----------- 454
+ MK + ++ TY+SL+ F E G A+ V M + +++
Sbjct: 485 IRSMKRR----DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASAN 540
Query: 455 -----------CYSI-------------LINGLCKNGKLMEAMMVWKQMLSRGIKLDVVA 490
CYS+ L++ K G L +A V++++ + DVV+
Sbjct: 541 LGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATP----DVVS 596
Query: 491 YSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNA 534
++ ++ G + + + F +M +E E PD T+ ILL+A
Sbjct: 597 WNGLVSGLASNGFISSALSAFEEMRMKETE--PDSVTFLILLSA 638
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 99/454 (21%), Positives = 184/454 (40%), Gaps = 62/454 (13%)
Query: 165 KSLNIQPNGLTFNLVIKALC-----------------KVGLVD----------------- 190
+SL +QPN T++ ++ +LC KVG D
Sbjct: 317 RSLGLQPNNFTYSAIL-SLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSA 375
Query: 191 ---QAVEVFRGIHLRNCAPDSYTYSTLMDGLCKEGRIDEAVSLLDEMQIEGTFPNPFVFN 247
+A VF + +P+ +++TL+ GL G + + LL EM PN +
Sbjct: 376 SEVEASRVFGAM----VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLS 431
Query: 248 VLISALCKKGDLIRAAKLVDNMSLKGCVPNE-VTYNTLVDGLCRKGKLNKAVSLLNQMVA 306
++ A C K +R + L+ V E V N+LVD K++ A +++ M
Sbjct: 432 GVLRA-CSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKR 490
Query: 307 NKCVPNDVTFGTLVHGFVKQGRASDGASVLISLEERGHRGNEYIYSSLISGLFKEGKFEH 366
+++T+ +LV F + G+ SV+ + G R ++ IS G E
Sbjct: 491 R----DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALET 546
Query: 367 AMQLWKEMMEKGCEPNTVVYSALIDGLCREGKADEAREYLIEMKNKGHLPNSFTYSSLMR 426
L ++ G V ++L+D + G ++A++ E+ P+ +++ L+
Sbjct: 547 GKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT----PDVVSWNGLVS 602
Query: 427 GFFEAGDCHKAILVWKEMKNNSCNHNEVCYSILINGLCKNGKLMEAMMVWKQMLSR--GI 484
G G A+ ++EM+ + V + IL++ C NG+L + + + Q++ + I
Sbjct: 603 GLASNGFISSALSAFEEMRMKETEPDSVTFLILLSA-CSNGRLTDLGLEYFQVMKKIYNI 661
Query: 485 KLDVVAYSSMIHGFCNAQLVDQGMKLFNQMLCQEAELQPDVATYNILLNAFYQQNNISRA 544
+ V Y ++ A +++ + M L+P+ + LL A + N+S
Sbjct: 662 EPQVEHYVHLVGILGRAGRLEEATGVVETM-----HLKPNAMIFKTLLRACRYRGNLSLG 716
Query: 545 MDVLNIMLDQGCDPDFITCDIFLKTLRDNMNPPQ 578
D+ N L P I L L D P+
Sbjct: 717 EDMANKGL--ALAPSDPALYILLADLYDESGKPE 748