Miyakogusa Predicted Gene
- Lj6g3v1392450.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1392450.1 Non Chatacterized Hit- tr|I1MGT9|I1MGT9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,79.91,0,seg,NULL;
TPR-like,NULL; PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; DYW_deaminase,CUFF.59449.1
(867 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 1133 0.0
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 585 e-167
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 570 e-162
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 551 e-157
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 543 e-154
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 542 e-154
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 542 e-154
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 534 e-152
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 533 e-151
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 533 e-151
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 524 e-148
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 520 e-147
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 517 e-146
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 507 e-143
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 506 e-143
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 497 e-140
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 493 e-139
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 493 e-139
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 493 e-139
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 491 e-138
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 490 e-138
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 487 e-137
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 484 e-136
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 482 e-136
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 476 e-134
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 474 e-133
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 473 e-133
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 472 e-133
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 471 e-133
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 468 e-132
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 466 e-131
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 459 e-129
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 452 e-127
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 449 e-126
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 449 e-126
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 449 e-126
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 448 e-126
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 445 e-125
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 445 e-125
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 444 e-124
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 443 e-124
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 442 e-124
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 440 e-123
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 438 e-123
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 438 e-123
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 435 e-122
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 433 e-121
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 433 e-121
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 432 e-121
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 431 e-121
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 426 e-119
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 424 e-118
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 424 e-118
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 424 e-118
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 424 e-118
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 421 e-118
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 420 e-117
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 420 e-117
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 418 e-117
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 416 e-116
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 416 e-116
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 416 e-116
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 415 e-116
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 414 e-115
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 411 e-114
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 410 e-114
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 409 e-114
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 407 e-113
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 405 e-113
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 404 e-112
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 404 e-112
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 403 e-112
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 402 e-112
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 401 e-112
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 401 e-112
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 401 e-112
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 400 e-111
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 400 e-111
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 399 e-111
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 393 e-109
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 393 e-109
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 392 e-109
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 389 e-108
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 388 e-107
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-106
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 384 e-106
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-106
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 383 e-106
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 381 e-105
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 378 e-105
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 376 e-104
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-103
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 373 e-103
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 368 e-101
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 363 e-100
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 360 2e-99
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 3e-98
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 356 5e-98
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 355 8e-98
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 354 2e-97
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 352 8e-97
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 351 1e-96
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 2e-96
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 3e-96
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 350 3e-96
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 8e-96
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 6e-95
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 9e-95
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 341 2e-93
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 3e-93
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 339 4e-93
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 1e-91
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 8e-91
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 326 4e-89
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 3e-88
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 322 6e-88
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 322 7e-88
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 321 2e-87
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 1e-86
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 315 7e-86
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 8e-86
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 4e-85
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 312 5e-85
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 311 2e-84
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 309 5e-84
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 8e-84
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 1e-83
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 6e-83
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 2e-81
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 299 5e-81
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 298 1e-80
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 3e-80
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 3e-79
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 291 1e-78
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 289 5e-78
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 1e-77
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 7e-77
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 283 3e-76
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 7e-76
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 280 2e-75
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 280 2e-75
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 3e-75
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 1e-73
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 275 1e-73
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 2e-73
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 2e-73
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 4e-73
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 6e-73
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 8e-73
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 5e-72
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 269 8e-72
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 267 3e-71
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 6e-71
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 265 1e-70
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 7e-70
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 2e-69
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 260 3e-69
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 4e-69
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 5e-69
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 7e-68
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 1e-67
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 3e-67
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 5e-67
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 5e-67
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 3e-65
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 2e-64
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 2e-64
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 4e-64
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 9e-64
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 1e-63
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 241 2e-63
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 3e-62
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 3e-62
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 7e-62
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 1e-61
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 4e-61
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 4e-61
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 4e-60
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 8e-59
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 5e-58
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 2e-57
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 3e-57
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 7e-57
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 7e-57
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 4e-56
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 6e-55
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 4e-54
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 202 1e-51
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 3e-50
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 7e-45
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 3e-39
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 4e-39
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 4e-38
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 124 4e-28
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 1e-26
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 9e-24
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 107 3e-23
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 4e-23
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 5e-23
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 7e-22
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 102 2e-21
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 5e-21
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 100 5e-21
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 6e-21
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 2e-20
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 3e-20
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 5e-20
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 5e-20
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 6e-20
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 7e-20
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 94 3e-19
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 5e-19
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 6e-19
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 92 1e-18
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 5e-18
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 5e-18
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 9e-18
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 2e-17
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 2e-17
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 3e-17
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 6e-17
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 85 3e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-16
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 5e-16
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-16
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 6e-16
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 8e-16
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 4e-15
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 4e-15
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 6e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 7e-15
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 80 8e-15
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 9e-15
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 79 1e-14
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-14
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-14
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-14
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 78 2e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 78 2e-14
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 77 5e-14
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 8e-14
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 9e-14
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 1e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 1e-13
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 3e-13
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 6e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 74 6e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 73 8e-13
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 1e-12
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 1e-12
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 2e-12
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 72 2e-12
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 71 3e-12
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 3e-12
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 4e-12
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 4e-12
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 4e-12
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 3e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 3e-11
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 7e-11
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 8e-11
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 1e-10
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 3e-10
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 64 5e-10
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-09
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 61 3e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 4e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 4e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 7e-09
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 8e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 8e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 8e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 8e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 59 2e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 59 2e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 59 2e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 4e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 4e-08
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 7e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 7e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 7e-08
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 8e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 8e-08
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 8e-08
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 8e-08
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 55 2e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 55 2e-07
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-06
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-06
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 52 2e-06
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 4e-06
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 50 5e-06
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 1133 bits (2931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/836 (62%), Positives = 649/836 (77%), Gaps = 7/836 (0%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
RSP WID LR + +S+ +A+ TY +M+ G+ PDN+AFPA+LKA A + D+ LGKQI
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
H HV+KFGY SV VAN+LVN+Y KCGD + VFDRIS+R+ VSWNS+I++ C F
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLR--DGLSLGKQVHAYTFRNGDWRTFTN 211
NV+P+SFTLVS+ ACSNL +GL +GKQVHAY R G+ +F
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII 239
Query: 212 NALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVR 271
N LV MY KLG++ +K L G F +DLV+WNTV+SSL QN++ EAL +L M+ GV
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 272 PDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRW 331
PD T++S LPACSHLEMLRTGKE+H YAL+N L +NSFVGSALVDMYCNCK+ GR
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCK 391
VFDG+ R + +WNAMIAGY++NE D EA+ LFI M + NSTT++ ++PACVR
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Query: 392 AFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMIT 451
AF KE IHG+VVKRG ++D++VQN LMDMYSR+G+I+I+ IFG M+ RD+V+WNTMIT
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 479
Query: 452 GYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEI 511
GYV H+DAL LLH MQ + + + LKPNS+TLMT+LP C EI
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 512 HAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKG 571
HAYA+K LATD+AVGSAL+DMYAKCGCL +SR VFDQ+P +NVITWNV+IMAYGMHG G
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599
Query: 572 EEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSS 631
+EA++L R M+ + ++PNEVT+I++FAACSHSGMVDEGL +F+ MK ++G+EPSS
Sbjct: 600 QEAIDLLRMMMVQG-----VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 654
Query: 632 DHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLL 691
DHYAC+VDLLGR+GR++EAY+L+ MP + K AWSSLLGA +IH NLE+GEIAA+ L+
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLI 714
Query: 692 VLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGD 751
LEPNVASHYVLL+NIYSSAGLWD+A ++R+ MKE GVRKEPGCSWIEH DEVHKF+AGD
Sbjct: 715 QLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGD 774
Query: 752 ASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLN 811
+SHPQS++L YLE L +RMRKEGYVPDTSCVLH+V+++EKE +LCGHSE+LAIAFG+LN
Sbjct: 775 SSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILN 834
Query: 812 TPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
T PGT IRV KNLRVCNDCH+ATKFISKIVDREIILRDVRRFH F+NGTCSCGDYW
Sbjct: 835 TSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 585 bits (1508), Expect = e-167, Method: Compositional matrix adjust.
Identities = 308/805 (38%), Positives = 470/805 (58%), Gaps = 30/805 (3%)
Query: 67 VPPDNFAFPA--VLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLA 124
+P + + PA +L+ + + +L +QI VFK G LV+++ + G +
Sbjct: 31 IPANVYEHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHF-FQTKLVSLFCRYGSVD 86
Query: 125 GAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACS 184
A VF+ I + +V +++M+ + +V+P + + C
Sbjct: 87 EAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCG 146
Query: 185 NLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWN 243
+ + L +GK++H ++G F L MYAK +++EA+ +F ++DLVSWN
Sbjct: 147 DEAE-LRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWN 205
Query: 244 TVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRN 303
T+++ SQN AL + M + ++P +T+ S LPA S L ++ GKEIHGYA+R+
Sbjct: 206 TIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS 265
Query: 304 T-DLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIK 362
D + N + +ALVDMY C + R +FDG+L R V WN+MI Y +NE EA+
Sbjct: 266 GFDSLVN--ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAML 323
Query: 363 LFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMY 422
+F +M+ E P ++ L AC IH V+ G +++ V N+L+ MY
Sbjct: 324 IFQKMLDEG-VKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMY 382
Query: 423 SRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDES 482
+ ++ + S+FG + R +VSWN MI G+ GR DALN M+ S
Sbjct: 383 CKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR-----------S 431
Query: 483 IPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNL 542
+KP++ T ++V+ IH ++ L ++ V +AL+DMYAKCG + +
Sbjct: 432 RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMI 491
Query: 543 SRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIF 602
+R++FD M R+V TWN +I YG HG G+ ALELF M I+PN VT++++
Sbjct: 492 ARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM-----QKGTIKPNGVTFLSVI 546
Query: 603 AACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMK 662
+ACSHSG+V+ GL F+ MK N+ IE S DHY +VDLLGR+GR+ EA+ I MP
Sbjct: 547 SACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVK-P 605
Query: 663 KVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRK 722
V+ + ++LGAC+IH+N+ E AA++L L P+ ++VLL+NIY +A +W++ +R
Sbjct: 606 AVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRV 665
Query: 723 KMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSC 782
M G+RK PGCS +E ++EVH F +G +HP SK+++ +LE L+ +++ GYVPDT+
Sbjct: 666 SMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNL 725
Query: 783 VLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVD 842
VL V+++ KE +L HSE+LAI+FGLLNT GTTI V KNLRVC DCH ATK+IS +
Sbjct: 726 VL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTG 784
Query: 843 REIILRDVRRFHHFRNGTCSCGDYW 867
REI++RD++RFHHF+NG CSCGDYW
Sbjct: 785 REIVVRDMQRFHHFKNGACSCGDYW 809
Score = 265 bits (677), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 165/513 (32%), Positives = 265/513 (51%), Gaps = 19/513 (3%)
Query: 47 AQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTS 106
A+ S +A+ + M V P + F +LK +L +GK+IHG + K G+ S
Sbjct: 111 AKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF-SLD 169
Query: 107 VAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXX 166
+ L NMY KC + A VFDR+ +RD VSWN+++A +
Sbjct: 170 LFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCE 229
Query: 167 XNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRID 225
N+ P+ T+VS+ A S LR +S+GK++H Y R+G D + ALV MYAK G ++
Sbjct: 230 ENLKPSFITIVSVLPAVSALRL-ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLE 288
Query: 226 EAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACS 285
A+ LF ++++VSWN++I + QN+ +EA+L ML GV+P V++ AL AC+
Sbjct: 289 TARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACA 348
Query: 286 HLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWN 345
L L G+ IH ++ L N V ++L+ MYC CK+ D +F + RT+ WN
Sbjct: 349 DLGDLERGRFIHKLSVE-LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWN 407
Query: 346 AMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVK 405
AMI G+A+N +A+ F +M + P++ T S++ A + IHG V++
Sbjct: 408 AMILGFAQNGRPIDALNYFSQMRSRT-VKPDTFTYVSVITAIAELSITHHAKWIHGVVMR 466
Query: 406 RGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNL 465
+K+ +V AL+DMY++ G I I++ IF M R + +WN MI GY G AL L
Sbjct: 467 SCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALEL 526
Query: 466 LHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIA 525
+MQ+G +KPN VT ++V+ C + Y +K+ + +++
Sbjct: 527 FEEMQKGT-----------IKPNGVTFLSVISACSHSGLVEAGLKCF-YMMKENYSIELS 574
Query: 526 VG--SALIDMYAKCGCLNLSRIVFDQMPTRNVI 556
+ A++D+ + G LN + QMP + +
Sbjct: 575 MDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 570 bits (1469), Expect = e-162, Method: Compositional matrix adjust.
Identities = 305/822 (37%), Positives = 470/822 (57%), Gaps = 28/822 (3%)
Query: 54 QAISTYANMVAAG-VPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANS 112
+ + T+ M++ + PD+F +P V+KA AG++D+ +G +HG V K G V V N+
Sbjct: 169 EVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVE-DVFVGNA 227
Query: 113 LVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD-- 170
LV+ YG G + A +FD + +R+ VSWNSMI N D
Sbjct: 228 LVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGA 287
Query: 171 --PTSFTLVSIAHACSNLRDGLSLGKQVHAYTFR-NGDWRTFTNNALVTMYAKLGRIDEA 227
P TLV++ C+ R+ + LGK VH + + D NNAL+ MY+K G I A
Sbjct: 288 FMPDVATLVTVLPVCARERE-IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA 346
Query: 228 KALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSG--VRPDGVTLASALPACS 285
+ +F + ++K++VSWNT++ S L ML G V+ D VT+ +A+P C
Sbjct: 347 QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCF 406
Query: 286 HLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWN 345
H L + KE+H Y+L+ + + N V +A V Y C + VF GI +TV WN
Sbjct: 407 HESFLPSLKELHCYSLKQ-EFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWN 465
Query: 346 AMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVK 405
A+I G+A++ ++ ++M S P+S T+ SLL AC + K+ + +HG++++
Sbjct: 466 ALIGGHAQSNDPRLSLDAHLQMKI-SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR 524
Query: 406 RGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNL 465
E+D +V +++ +Y G + +++F +M+ + +VSWNT+ITGY+ G D AL +
Sbjct: 525 NWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGV 584
Query: 466 LHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIA 525
M ++ +++M V C E HAYALK L D
Sbjct: 585 FRQMVL-----------YGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAF 633
Query: 526 VGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEK 585
+ +LIDMYAK G + S VF+ + ++ +WN +IM YG+HG +EA++LF M
Sbjct: 634 IACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTG 693
Query: 586 DSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSG 645
+ P+++T++ + AC+HSG++ EGL MK++ G++P+ HYAC++D+LGR+G
Sbjct: 694 HN-----PDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAG 748
Query: 646 RVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLS 705
++++A +++ S V W SLL +C+IHQNLE+GE A +L LEP +YVLLS
Sbjct: 749 QLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLS 808
Query: 706 NIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLE 765
N+Y+ G W+ +R++M EM +RK+ GCSWIE +V F+ G+ +E+
Sbjct: 809 NLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWS 868
Query: 766 NLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLR 825
L ++ K GY PDT V HD+ +EEK L GHSE+LA+ +GL+ T GTTIRV KNLR
Sbjct: 869 ILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLR 928
Query: 826 VCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
+C DCH A K ISK+++REI++RD +RFHHF+NG CSCGDYW
Sbjct: 929 ICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 148/615 (24%), Positives = 280/615 (45%), Gaps = 34/615 (5%)
Query: 73 AFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDR 132
A +L+A+ D+ +G++IH V + ++ MY CG + VFD
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDA 145
Query: 133 ISDRDHVSWNSMIAAACRFXXX-XXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLS 191
+ ++ WN++I++ R ++ P FT + AC+ + D +
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSD-VG 204
Query: 192 LGKQVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLS 250
+G VH + G F NALV+ Y G + +A LF + +++LVSWN++I S
Sbjct: 205 IGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFS 264
Query: 251 QNDRFEEALLFLYHMLQ----SGVRPDGVTLASALPACSHLEMLRTGKEIHGYALR---N 303
N EE+ L L M++ PD TL + LP C+ + GK +HG+A++ +
Sbjct: 265 DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD 324
Query: 304 TDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKL 363
+L+ N +AL+DMY C + +F + V WN M+ G++ +
Sbjct: 325 KELVLN----NALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDV 380
Query: 364 FIEMVYES-DFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMY 422
+M+ D + T+ + +P C + +H Y +K+ F ++ V NA + Y
Sbjct: 381 LRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 440
Query: 423 SRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDES 482
++ G + ++ +F + + + SWN +I G+ +D L+L D + +
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHA--QSNDPRLSL---------DAHLQMKI 489
Query: 483 IPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNL 542
L P+S T+ ++L C E+H + ++ L D+ V +++ +Y CG L
Sbjct: 490 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 549
Query: 543 SRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIF 602
+ +FD M +++++WN +I Y +G + AL +FR+MV I+ ++ + +F
Sbjct: 550 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG-----IQLCGISMMPVF 604
Query: 603 AACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMK 662
ACS + G H H +E + L+D+ ++G + ++ K+ + K
Sbjct: 605 GACSLLPSLRLGREA-HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE--K 661
Query: 663 KVDAWSSLLGACKIH 677
+W++++ IH
Sbjct: 662 STASWNAMIMGYGIH 676
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 133/279 (47%), Gaps = 10/279 (3%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
++ ++W + AQS+ ++ + M +G+ PD+F ++L A + + L LGK++
Sbjct: 459 KTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEV 518
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
HG + + + + V S++++Y CG+L +FD + D+ VSWN++I +
Sbjct: 519 HGFIIR-NWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGF 577
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRN-GDWRTFTNN 212
+ +++ + ACS L L LG++ HAY ++ + F
Sbjct: 578 PDRALGVFRQMVLYGIQLCGISMMPVFGACS-LLPSLRLGREAHAYALKHLLEDDAFIAC 636
Query: 213 ALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRP 272
+L+ MYAK G I ++ +F +K SWN +I + +EA+ M ++G P
Sbjct: 637 SLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNP 696
Query: 273 DGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSF 311
D +T L AC+H ++ G LR D + +SF
Sbjct: 697 DDLTFLGVLTACNHSGLIHEG-------LRYLDQMKSSF 728
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 551 bits (1421), Expect = e-157, Method: Compositional matrix adjust.
Identities = 302/839 (35%), Positives = 465/839 (55%), Gaps = 36/839 (4%)
Query: 37 SAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGH 96
S+W+ + +++ +AI + +M G+ P +AF +VL A + L +G+Q+HG
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 97 VFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXX 156
V K G++S + V N+LV++Y G+L A H+F +S RD V++N++I +
Sbjct: 314 VLKLGFSSDTY-VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEK 372
Query: 157 XXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDG-LSLGKQVHAYTFRNGDWRTFTNN--- 212
++P S TL S+ ACS DG L G+Q+HAYT + G F +N
Sbjct: 373 AMELFKRMHLDGLEPDSNTLASLVVACS--ADGTLFRGQQLHAYTTKLG----FASNNKI 426
Query: 213 --ALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGV 270
AL+ +YAK I+ A F + +++V WN ++ + D + M +
Sbjct: 427 EGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEI 486
Query: 271 RPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGR 330
P+ T S L C L L G++IH ++ T+ N++V S L+DMY K D
Sbjct: 487 VPNQYTYPSILKTCIRLGDLELGEQIHSQIIK-TNFQLNAYVCSVLIDMYAKLGKLDTAW 545
Query: 331 WVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRC 390
+ + V W MIAGY + FDD+A+ F +M+ + + L++ + AC
Sbjct: 546 DILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML-DRGIRSDEVGLTNAVSACAGL 604
Query: 391 KAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMI 450
+A + + IH GF D QNAL+ +YSR G+IE S F + D ++WN ++
Sbjct: 605 QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALV 664
Query: 451 TGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXE 510
+G+ G +++AL + M R D N+ T + + +
Sbjct: 665 SGFQQSGNNEEALRVFVRMNREGIDN-----------NNFTFGSAVKAASETANMKQGKQ 713
Query: 511 IHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGK 570
+HA K ++ V +ALI MYAKCG ++ + F ++ T+N ++WN +I AY HG
Sbjct: 714 VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGF 773
Query: 571 GEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPS 630
G EAL+ F +M+ + +RPN VT + + +ACSH G+VD+G+ F +M + +G+ P
Sbjct: 774 GSEALDSFDQMI-----HSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 828
Query: 631 SDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDA--WSSLLGACKIHQNLEVGEIAAK 688
+HY C+VD+L R+G + A + I+ MP K DA W +LL AC +H+N+E+GE AA
Sbjct: 829 PEHYVCVVDMLTRAGLLSRAKEFIQEMPI---KPDALVWRTLLSACVVHKNMEIGEFAAH 885
Query: 689 QLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFL 748
LL LEP ++ YVLLSN+Y+ + WD R+KMKE GV+KEPG SWIE ++ +H F
Sbjct: 886 HLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFY 945
Query: 749 AGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFG 808
GD +HP + E+HEY ++L +R + GYV D +L+++ E+K+ ++ HSE+LAI+FG
Sbjct: 946 VGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFG 1005
Query: 809 LLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
LL+ P I V KNLRVCNDCH KF+SK+ +REII+RD RFHHF G CSC DYW
Sbjct: 1006 LLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 157/588 (26%), Positives = 266/588 (45%), Gaps = 22/588 (3%)
Query: 66 GVPPDNFAFPAVLKAAAGVN-DLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLA 124
G+ P++ +L+ N L+ G+++H + K G S ++ L + Y GDL
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNG-CLSEKLFDFYLFKGDLY 137
Query: 125 GAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACS 184
GA VFD + +R +WN MI NV P T + AC
Sbjct: 138 GAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR 197
Query: 185 NLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWN 243
+ +Q+HA G T N L+ +Y++ G +D A+ +F KD SW
Sbjct: 198 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 244 TVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRN 303
+IS LS+N+ EA+ M G+ P +S L AC +E L G+++HG L+
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK- 316
Query: 304 TDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKL 363
+++V +ALV +Y + +F + +R +N +I G ++ + ++A++L
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 364 FIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYS 423
F M + P+S TL+SL+ AC + +H Y K GF + ++ AL+++Y+
Sbjct: 377 FKRM-HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 435
Query: 424 RMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESI 483
+ IE + F + ++V WN M+ Y G DD N ++ Q +E
Sbjct: 436 KCADIETALDYFLETEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEE------- 485
Query: 484 PLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLS 543
+ PN T ++L C +IH+ +K + V S LIDMYAK G L+ +
Sbjct: 486 -IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 544
Query: 544 RIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFA 603
+ + ++V++W +I Y + ++AL FR+M+ ++ IR +EV +
Sbjct: 545 WDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML-----DRGIRSDEVGLTNAVS 599
Query: 604 ACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAY 651
AC+ + EG + H G LV L R G++EE+Y
Sbjct: 600 ACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 646
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 123/306 (40%), Gaps = 27/306 (8%)
Query: 365 IEMVYESDFTPNSTTLSSLLPACVRCKAFLDK-EGIHGYVVKRGFEKDKYVQNALMDMYS 423
I+ V PN TL LL C++ LD+ +H ++K G + + + L D Y
Sbjct: 72 IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 131
Query: 424 RMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESI 483
G + + +F M R I +WN MI + L M S
Sbjct: 132 FKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMV-----------SE 180
Query: 484 PLKPNSVTLMTVLPGCXXXXXXXXXXE-IHAYALKQKLATDIAVGSALIDMYAKCGCLNL 542
+ PN T VL C E IHA L Q L V + LID+Y++ G ++L
Sbjct: 181 NVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDL 240
Query: 543 SRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIF 602
+R VFD + ++ +W +I + EA+ LF M I P + ++
Sbjct: 241 ARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLG-----IMPTPYAFSSVL 295
Query: 603 AACSHSGMVDEGLNLFHTMKANHGIEPSSDHYAC--LVDLLGRSGRVEEAYKLIKTMPSN 660
+AC ++ G L H + G SSD Y C LV L G + A + SN
Sbjct: 296 SACKKIESLEIGEQL-HGLVLKLGF--SSDTYVCNALVSLYFHLGNLISAEHIF----SN 348
Query: 661 MKKVDA 666
M + DA
Sbjct: 349 MSQRDA 354
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 102/246 (41%), Gaps = 39/246 (15%)
Query: 473 QDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXX-XXXEIHAYALKQKLATDIAVGSALI 531
Q+ + E+ ++PN TL +L GC ++H+ LK L ++ + L
Sbjct: 68 QEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLF 127
Query: 532 DMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEI 591
D Y G L + VFD+MP R + TWN +I E LF RMV+E +
Sbjct: 128 DFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSEN-----V 182
Query: 592 RPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAY 651
PNE T+ + AC + + + H G+ S+ L+DL R+G V+ A
Sbjct: 183 TPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLAR 242
Query: 652 KLIK-----------TMPSNMKKVD----------------------AWSSLLGACKIHQ 678
++ M S + K + A+SS+L ACK +
Sbjct: 243 RVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 302
Query: 679 NLEVGE 684
+LE+GE
Sbjct: 303 SLEIGE 308
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 543 bits (1398), Expect = e-154, Method: Compositional matrix adjust.
Identities = 280/793 (35%), Positives = 451/793 (56%), Gaps = 21/793 (2%)
Query: 76 AVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISD 135
+VL+ A L GK++ + G+ S + + L MY CGDL A VFD +
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGFVIDS-NLGSKLSLMYTNCGDLKEASRVFDEVKI 157
Query: 136 RDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQ 195
+ WN ++ + V+ S+T ++ + S+LR + G+Q
Sbjct: 158 EKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS-VHGGEQ 216
Query: 196 VHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDR 254
+H + ++G R N+LV Y K R+D A+ +F ++D++SWN++I+ N
Sbjct: 217 LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGL 276
Query: 255 FEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGS 314
E+ L ML SG+ D T+ S C+ ++ G+ +H ++ ++ F +
Sbjct: 277 AEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNT 336
Query: 315 ALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFT 374
L+DMY C D + VF + R+V + +MIAGYAR EA+KLF EM E +
Sbjct: 337 -LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM-EEEGIS 394
Query: 375 PNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSI 434
P+ T++++L C R + + + +H ++ + D +V NALMDMY++ G ++ ++ +
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 435 FGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMT 494
F M +DI+SWNT+I GY ++AL+L + + E P+ T+
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL----------EEKRFSPDERTVAC 504
Query: 495 VLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRN 554
VLP C EIH Y ++ +D V ++L+DMYAKCG L L+ ++FD + +++
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD 564
Query: 555 VITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEG 614
+++W V+I YGMHG G+EA+ LF +M I +E++++++ ACSHSG+VDEG
Sbjct: 565 LVSWTVMIAGYGMHGFGKEAIALFNQM-----RQAGIEADEISFVSLLYACSHSGLVDEG 619
Query: 615 LNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGAC 674
F+ M+ IEP+ +HYAC+VD+L R+G + +AY+ I+ MP W +LL C
Sbjct: 620 WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIP-PDATIWGALLCGC 678
Query: 675 KIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPG 734
+IH ++++ E A+++ LEP +YVL++NIY+ A W+Q +RK++ + G+RK PG
Sbjct: 679 RIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPG 738
Query: 735 CSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKET 794
CSWIE + V+ F+AGD+S+P+++ + +L + RM +EGY P T L D ++ EKE
Sbjct: 739 CSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEE 798
Query: 795 MLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFH 854
LCGHSE+LA+A G++++ G IRVTKNLRVC DCH KF+SK+ REI+LRD RFH
Sbjct: 799 ALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFH 858
Query: 855 HFRNGTCSCGDYW 867
F++G CSC +W
Sbjct: 859 QFKDGHCSCRGFW 871
Score = 242 bits (618), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 154/563 (27%), Positives = 280/563 (49%), Gaps = 30/563 (5%)
Query: 47 AQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTS 106
A+S F +I + M+++GV D++ F V K+ + + ++ G+Q+HG + K G+ +
Sbjct: 171 AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERN 230
Query: 107 VAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXX 166
+V NSLV Y K + A VFD +++RD +SWNS+I
Sbjct: 231 -SVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLV 289
Query: 167 XNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRT--FTNNALVTMYAKLGRI 224
++ T+VS+ C++ R +SLG+ VH+ + R F N L+ MY+K G +
Sbjct: 290 SGIEIDLATIVSVFAGCADSRL-ISLGRAVHSIGVKACFSREDRFCNT-LLDMYSKCGDL 347
Query: 225 DEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPAC 284
D AKA+F D+ +VS+ ++I+ ++ EA+ M + G+ PD T+ + L C
Sbjct: 348 DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCC 407
Query: 285 SHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVW 344
+ +L GK +H + ++ DL + FV +AL+DMY C + VF + + + W
Sbjct: 408 ARYRLLDEGKRVHEW-IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISW 466
Query: 345 NAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVV 404
N +I GY++N + +EA+ LF ++ E F+P+ T++ +LPAC AF IHGY++
Sbjct: 467 NTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIM 526
Query: 405 KRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALN 464
+ G+ D++V N+L+DMY++ G + ++ +F + +D+VSW MI GY + G +A+
Sbjct: 527 RNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIA 586
Query: 465 LLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQ-KLATD 523
L + M++ ++ + ++ +++L C + K+
Sbjct: 587 LFNQMRQA-----------GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPT 635
Query: 524 IAVGSALIDMYAKCGCLNLSRIVFDQMPT-RNVITWNVLIMAYGMHGKGEEALELFRRMV 582
+ + ++DM A+ G L + + MP + W L+ +H + +
Sbjct: 636 VEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVK---------L 686
Query: 583 AEKDSNK--EIRPNEVTYIAIFA 603
AEK + K E+ P Y + A
Sbjct: 687 AEKVAEKVFELEPENTGYYVLMA 709
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 210/440 (47%), Gaps = 27/440 (6%)
Query: 236 DKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKE 295
D+ + NT + ++ E A+ L + + P TL S L C+ + L+ GKE
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKE 115
Query: 296 IHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNE 355
+ + +R + +S +GS L MY NC + VFD + WN ++ A++
Sbjct: 116 VDNF-IRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG 174
Query: 356 FDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQ 415
+I LF +M+ S +S T S + + ++ E +HG+++K GF + V
Sbjct: 175 DFSGSIGLFKKMM-SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG 233
Query: 416 NALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDD 475
N+L+ Y + R++ ++ +F M RD++SWN++I GYV G + L++ M
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVS--- 290
Query: 476 EYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYA 535
++ + T+++V GC +H+ +K + + + L+DMY+
Sbjct: 291 --------GIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 342
Query: 536 KCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNE 595
KCG L+ ++ VF +M R+V+++ +I Y G EA++LF M E I P+
Sbjct: 343 KCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG-----ISPDV 397
Query: 596 VTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYA--CLVDLLGRSGRVEEAYKL 653
T A+ C+ ++DEG + +K N + D + L+D+ + G ++EA +
Sbjct: 398 YTVTAVLNCCARYRLLDEGKRVHEWIKEN---DLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 654 IKTMPSNMKKVDAWSSLLGA 673
M +K + +W++++G
Sbjct: 455 FSEM--RVKDIISWNTIIGG 472
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 542 bits (1396), Expect = e-154, Method: Compositional matrix adjust.
Identities = 304/825 (36%), Positives = 448/825 (54%), Gaps = 67/825 (8%)
Query: 91 KQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRI--SDRDHVSWNSMIAAA 148
K IH + FG ++ + + L++ Y G L+ A + R SD WNS+I +
Sbjct: 45 KLIHQKLLSFGI--LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSY 102
Query: 149 CRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDW-R 207
+ P ++T + AC + + G+ HA + G
Sbjct: 103 GDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEI-SSVRCGESAHALSLVTGFISN 161
Query: 208 TFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHML- 266
F NALV MY++ + +A+ +F D+VSWN++I S ++ + + AL M
Sbjct: 162 VFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTN 221
Query: 267 QSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKA 326
+ G RPD +TL + LP C+ L GK++H +A+ +++I N FVG+ LVDMY C
Sbjct: 222 EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAV-TSEMIQNMFVGNCLVDMYAKCGMM 280
Query: 327 DKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYE---------------- 370
D+ VF + + V WNAM+AGY++ ++A++LF +M E
Sbjct: 281 DEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGY 340
Query: 371 ------------------SDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVV-------K 405
S PN TL S+L C A + + IH Y + K
Sbjct: 341 AQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRK 400
Query: 406 RGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD--RRDIVSWNTMITGYVVCGRHDDAL 463
G + V N L+DMY++ +++ ++++F S+ RD+V+W MI GY G + AL
Sbjct: 401 NGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKAL 460
Query: 464 NLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALK-QKLAT 522
LL +M +E+D +PN+ T+ L C +IHAYAL+ Q+ A
Sbjct: 461 ELLSEM-------FEED--CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV 511
Query: 523 DIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMV 582
+ V + LIDMYAKCG ++ +R+VFD M +N +TW L+ YGMHG GEEAL +F M
Sbjct: 512 PLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM- 570
Query: 583 AEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLG 642
+ + VT + + ACSHSGM+D+G+ F+ MK G+ P +HYACLVDLLG
Sbjct: 571 ----RRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLG 626
Query: 643 RSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYV 702
R+GR+ A +LI+ MP V W + L C+IH +E+GE AA+++ L N Y
Sbjct: 627 RAGRLNAALRLIEEMPMEPPPV-VWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYT 685
Query: 703 LLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHE 762
LLSN+Y++AG W IR M+ GV+K PGCSW+E F GD +HP +KE+++
Sbjct: 686 LLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQ 745
Query: 763 YLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTK 822
L + +QR++ GYVP+T LHDVDDEEK+ +L HSE+LA+A+G+L TP G IR+TK
Sbjct: 746 VLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITK 805
Query: 823 NLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
NLRVC DCH A ++S+I+D +IILRD RFHHF+NG+CSC YW
Sbjct: 806 NLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 245 bits (625), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 179/581 (30%), Positives = 270/581 (46%), Gaps = 71/581 (12%)
Query: 69 PDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHH 128
PDN+ FP V KA ++ + G+ H G+ S +V V N+LV MY +C L+ A
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFIS-NVFVGNALVAMYSRCRSLSDARK 183
Query: 129 VFDRISDRDHVSWNSMIAAACRF-XXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLR 187
VFD +S D VSWNS+I + + P + TLV++ C++L
Sbjct: 184 VFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Query: 188 DGLSLGKQVHAYTFRNGDWRT-FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVI 246
SLGKQ+H + + + F N LV MYAK G +DEA +F KD+VSWN ++
Sbjct: 244 TH-SLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302
Query: 247 SSLSQNDRFE-----------------------------------EALLFLYHMLQSGVR 271
+ SQ RFE EAL ML SG++
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 272 PDGVTLASALPACSHLEMLRTGKEIHGYA------LRNTDLIDNSFVGSALVDMYCNCKK 325
P+ VTL S L C+ + L GKEIH YA LR D + V + L+DMY CKK
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 326 ADKGRWVFDGI--LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFT-PNSTTLSS 382
D R +FD + R V W MI GY+++ ++A++L EM E T PN+ T+S
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482
Query: 383 LLPACVRCKAFLDKEGIHGYVVKRGFEK-DKYVQNALMDMYSRMGRIEISKSIFGSMDRR 441
L AC A + IH Y ++ +V N L+DMY++ G I ++ +F +M +
Sbjct: 483 ALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK 542
Query: 442 DIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXX 501
+ V+W +++TGY + G ++AL + +M+R I K + VTL+ VL C
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFDEMRR-----------IGFKLDGVTLLVVLYACSH 591
Query: 502 XXXXXXXXEIHAYALKQKLATDIAVG----SALIDMYAKCGCLNLSRIVFDQMPTR-NVI 556
E Y + K ++ G + L+D+ + G LN + + ++MP +
Sbjct: 592 SGMIDQGME---YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPV 648
Query: 557 TWNVLIMAYGMHGK---GEEALELFRRMVAEKDSNKEIRPN 594
W + +HGK GE A E + + D + + N
Sbjct: 649 VWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSN 689
Score = 218 bits (555), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 167/591 (28%), Positives = 259/591 (43%), Gaps = 49/591 (8%)
Query: 181 HACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLF--DDKD 238
H C + S K +H G + L++ Y +G + A +L F D
Sbjct: 36 HKCKTI----SQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAG 91
Query: 239 LVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHG 298
+ WN++I S N + L M PD T AC + +R G+ H
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 299 YALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDD 358
+L T I N FVG+ALV MY C+ R VFD + V WN++I YA+
Sbjct: 152 LSLV-TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPK 210
Query: 359 EAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNAL 418
A+++F M E P++ TL ++LP C + +H + V ++ +V N L
Sbjct: 211 VALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCL 270
Query: 419 MDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDM--------- 469
+DMY++ G ++ + ++F +M +D+VSWN M+ GY GR +DA+ L M
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 470 -----------QRGQDDEY----EDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAY 514
QRG E S +KPN VTL++VL GC EIH Y
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 515 ALKQKL-------ATDIAVGSALIDMYAKCGCLNLSRIVFDQMPT--RNVITWNVLIMAY 565
A+K + + V + LIDMYAKC ++ +R +FD + R+V+TW V+I Y
Sbjct: 391 AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGY 450
Query: 566 GMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANH 625
HG +ALEL M E + + RPN T AC+ + G + N
Sbjct: 451 SQHGDANKALELLSEMFEE---DCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ 507
Query: 626 GIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLE--VG 683
CL+D+ + G + +A + M + K W+SL+ +H E +G
Sbjct: 508 QNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMA--KNEVTWTSLMTGYGMHGYGEEALG 565
Query: 684 EIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEM-GVRKEP 733
+ + + + + V+L S +G+ DQ M+ +MK + GV P
Sbjct: 566 IFDEMRRIGFKLDGVTLLVVLYAC-SHSGMIDQGMEYFNRMKTVFGVSPGP 615
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 128/270 (47%), Gaps = 15/270 (5%)
Query: 39 WIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVF 98
W + AQ +A+ M+++G+ P+ +VL A V L GK+IH +
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392
Query: 99 KF-------GYASTSVAVANSLVNMYGKCGDLAGAHHVFDRIS--DRDHVSWNSMIAAAC 149
K+ G+ ++ V N L++MY KC + A +FD +S +RD V+W MI
Sbjct: 393 KYPIDLRKNGHGDENM-VINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 451
Query: 150 RFXXXXXXXXXXXXXXXXNVD--PTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWR 207
+ + P +FT+ AC++L L +GKQ+HAY RN
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLA-ALRIGKQIHAYALRNQQNA 510
Query: 208 T--FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHM 265
F +N L+ MYAK G I +A+ +F K+ V+W ++++ + EEAL M
Sbjct: 511 VPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
Query: 266 LQSGVRPDGVTLASALPACSHLEMLRTGKE 295
+ G + DGVTL L ACSH M+ G E
Sbjct: 571 RRIGFKLDGVTLLVVLYACSHSGMIDQGME 600
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 542 bits (1396), Expect = e-154, Method: Compositional matrix adjust.
Identities = 319/834 (38%), Positives = 475/834 (56%), Gaps = 30/834 (3%)
Query: 39 WIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVF 98
W +R +++ F +A+ Y + + V PD + FP+V+KA AG+ D +G ++ +
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 99 KFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXX 158
G+ S + V N+LV+MY + G L A VFD + RD VSWNS+I+
Sbjct: 134 DMGFES-DLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192
Query: 159 XXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNA-LVTM 217
+ P SFT+ S+ A NL + G+ +H + ++G N LV M
Sbjct: 193 EIYHELKNSWIVPDSFTVSSVLPAFGNLL-VVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251
Query: 218 YAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEAL-LFLYHMLQSGVRPDGVT 276
Y K R +A+ +F D +D VS+NT+I + + EE++ +FL ++ Q +PD +T
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ--FKPDLLT 309
Query: 277 LASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI 336
++S L AC HL L K I+ Y L+ +++++ V + L+D+Y C R VF+ +
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST-VRNILIDVYAKCGDMITARDVFNSM 368
Query: 337 LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDK 396
+ WN++I+GY ++ EA+KLF M+ + + T L L+ R
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLM-LISVSTRLADLKFG 427
Query: 397 EGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVC 456
+G+H +K G D V NAL+DMY++ G + S IF SM D V+WNT+I+ V
Sbjct: 428 KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRF 487
Query: 457 GRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYAL 516
G L + M++ + + P+ T + LP C EIH L
Sbjct: 488 GDFATGLQVTTQMRKSE-----------VVPDMATFLVTLPMCASLAAKRLGKEIHCCLL 536
Query: 517 KQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALE 576
+ +++ +G+ALI+MY+KCGCL S VF++M R+V+TW +I AYGM+G+GE+ALE
Sbjct: 537 RFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALE 596
Query: 577 LFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYAC 636
F M EK I P+ V +IAI ACSHSG+VDEGL F MK ++ I+P +HYAC
Sbjct: 597 TFADM--EKSG---IVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYAC 651
Query: 637 LVDLLGRSGRVEEAYKLIKTMPSNMKKVDA--WSSLLGACKIHQNLEVGEIAAKQLLVLE 694
+VDLL RS ++ +A + I+ MP K DA W+S+L AC+ ++E E +++++ L
Sbjct: 652 VVDLLSRSQKISKAEEFIQAMPI---KPDASIWASVLRACRTSGDMETAERVSRRIIELN 708
Query: 695 PNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASH 754
P+ + +L SN Y++ WD+ IRK +K+ + K PG SWIE VH F +GD S
Sbjct: 709 PDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSA 768
Query: 755 PQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEE-KETMLCGHSERLAIAFGLLNTP 813
PQS+ +++ LE L M KEGY+PD V ++++EE K ++CGHSERLAIAFGLLNT
Sbjct: 769 PQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTE 828
Query: 814 PGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
PGT ++V KNLRVC DCH TK ISKIV REI++RD RFH F++GTCSC D W
Sbjct: 829 PGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 251/515 (48%), Gaps = 26/515 (5%)
Query: 194 KQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDD-KDLVSWNTVISSLSQ 251
+++HA G D F + L+ Y+ + ++F K++ WN++I + S+
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 252 NDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSF 311
N F EAL F + +S V PD T S + AC+ L G ++ L + + F
Sbjct: 84 NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL-DMGFESDLF 142
Query: 312 VGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYES 371
VG+ALVDMY + R VFD + R + WN++I+GY+ + + +EA++++ E+ S
Sbjct: 143 VGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL-KNS 201
Query: 372 DFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEIS 431
P+S T+SS+LPA +G+HG+ +K G V N L+ MY + R +
Sbjct: 202 WIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDA 261
Query: 432 KSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVT 491
+ +F MD RD VS+NTMI GY+ ++++ + + D++ KP+ +T
Sbjct: 262 RRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE----NLDQF--------KPDLLT 309
Query: 492 LMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMP 551
+ +VL C I+ Y LK + V + LID+YAKCG + +R VF+ M
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME 369
Query: 552 TRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMV 611
++ ++WN +I Y G EA++LF+ M+ ++ + + +TY+ + + + +
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-----QADHITYLMLISVSTRLADL 424
Query: 612 DEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLL 671
G L H+ GI L+D+ + G V ++ K+ +M + W++++
Sbjct: 425 KFGKGL-HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG--DTVTWNTVI 481
Query: 672 GACKIHQNLEVGEIAAKQLLVLE--PNVASHYVLL 704
AC + G Q+ E P++A+ V L
Sbjct: 482 SACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTL 516
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 534 bits (1376), Expect = e-152, Method: Compositional matrix adjust.
Identities = 287/818 (35%), Positives = 459/818 (56%), Gaps = 29/818 (3%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+A + N+ G+ D F +VLK +A + D G+Q+H KFG+ V+V SL
Sbjct: 76 EAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLD-DVSVGTSL 134
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
V+ Y K + VFD + +R+ V+W ++I+ R P S
Sbjct: 135 VDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNS 194
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTF-TNNALVTMYAKLGRIDEAKALFG 232
FT + + G G QVH +NG +T +N+L+ +Y K G + +A+ LF
Sbjct: 195 FTFAAALGVLAEEGVG-GRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFD 253
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRT 292
+ K +V+WN++IS + N EAL Y M + VR + AS + C++L+ LR
Sbjct: 254 KTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRF 313
Query: 293 GKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI-LRRTVAVWNAMIAGY 351
+++H ++ L D + + +AL+ Y C +F I V W AMI+G+
Sbjct: 314 TEQLHCSVVKYGFLFDQN-IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGF 372
Query: 352 ARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKD 411
+N+ +EA+ LF EM PN T S +L A + +H VVK +E+
Sbjct: 373 LQNDGKEEAVDLFSEM-KRKGVRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERS 427
Query: 412 KYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQR 471
V AL+D Y ++G++E + +F +D +DIV+W+ M+ GY G + A+ + ++ +
Sbjct: 428 STVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTK 487
Query: 472 GQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXX-XEIHAYALKQKLATDIAVGSAL 530
G +KPN T ++L C + H +A+K +L + + V SAL
Sbjct: 488 G-----------GIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSAL 536
Query: 531 IDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKE 590
+ MYAK G + + VF + +++++WN +I Y HG+ +AL++F+ M ++
Sbjct: 537 LTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM-----KKRK 591
Query: 591 IRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEA 650
++ + VT+I +FAAC+H+G+V+EG F M + I P+ +H +C+VDL R+G++E+A
Sbjct: 592 VKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 651
Query: 651 YKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSS 710
K+I+ MP N W ++L AC++H+ E+G +AA++++ ++P ++ YVLLSN+Y+
Sbjct: 652 MKVIENMP-NPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAE 710
Query: 711 AGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQR 770
+G W + +RK M E V+KEPG SWIE +++ + FLAGD SHP +++ LE+L R
Sbjct: 711 SGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTR 770
Query: 771 MRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDC 830
++ GY PDTS VL D+DDE KE +L HSERLAIAFGL+ TP G+ + + KNLRVC DC
Sbjct: 771 LKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDC 830
Query: 831 HVATKFISKIVDREIILRDVRRFHHF-RNGTCSCGDYW 867
H+ K I+KI +REI++RD RFHHF +G CSCGD+W
Sbjct: 831 HLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 212 bits (540), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 161/562 (28%), Positives = 265/562 (47%), Gaps = 39/562 (6%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+ W + A++S + ++ + M G P++F F A L A G Q+
Sbjct: 157 RNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQV 216
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
H V K G T + V+NSL+N+Y KCG++ A +FD+ + V+WNSMI+
Sbjct: 217 HTVVVKNGLDKT-IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNN- 212
V + + S+ C+NL++ L +Q+H + G F N
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKE-LRFTEQLHCSVVKYG--FLFDQNI 332
Query: 213 --ALVTMYAKLGRIDEAKALFGLFD-DKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSG 269
AL+ Y+K + +A LF ++VSW +IS QND EEA+ M + G
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 270 VRPDGVT---LASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKA 326
VRP+ T + +ALP S E+H ++ T+ +S VG+AL+D Y K
Sbjct: 393 VRPNEFTYSVILTALPVISP-------SEVHAQVVK-TNYERSSTVGTALLDAYVKLGKV 444
Query: 327 DKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPA 386
++ VF GI + + W+AM+AGYA+ + AIK+F E+ + PN T SS+L
Sbjct: 445 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELT-KGGIKPNEFTFSSILNV 503
Query: 387 CVRCKAFLDK-EGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVS 445
C A + + + HG+ +K + V +AL+ MY++ G IE ++ +F +D+VS
Sbjct: 504 CAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS 563
Query: 446 WNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXX 505
WN+MI+GY G+ AL++ +M++ + +K + VT + V C
Sbjct: 564 WNSMISGYAQHGQAMKALDVFKEMKKRK-----------VKMDGVTFIGVFAACTHAGLV 612
Query: 506 XXXXEIHAYALKQ-KLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVIT-WNVLIM 563
+ ++ K+A S ++D+Y++ G L + V + MP T W ++
Sbjct: 613 EEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILA 672
Query: 564 AYGMHGKGEEALELFRRMVAEK 585
A +H K E R+ AEK
Sbjct: 673 ACRVHKKTE-----LGRLAAEK 689
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/561 (24%), Positives = 255/561 (45%), Gaps = 35/561 (6%)
Query: 123 LAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHA 182
L AH++FD+ RD S+ S++ R ++ S+
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 183 CSNLRDGLSLGKQVHAYTFRNGDWRTFT-NNALVTMYAKLGRIDEAKALFGLFDDKDLVS 241
+ L D L G+Q+H + G + +LV Y K + + +F ++++V+
Sbjct: 103 SATLCDEL-FGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 242 WNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYAL 301
W T+IS ++N +E L M G +P+ T A+AL + + G ++H +
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221
Query: 302 RNTDLIDNSF-VGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEA 360
+N +D + V ++L+++Y C K R +FD ++V WN+MI+GYA N D EA
Sbjct: 222 KNG--LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA 279
Query: 361 IKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMD 420
+ +F M + ++ +S++ C K E +H VVK GF D+ ++ ALM
Sbjct: 280 LGMFYSMRLNY-VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV 338
Query: 421 MYSRMGRIEISKSIFGSMD-RRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYED 479
YS+ + + +F + ++VSW MI+G++ ++A++L +M+R
Sbjct: 339 AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK------- 391
Query: 480 DESIPLKPNSVT---LMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAK 536
++PN T ++T LP E+HA +K VG+AL+D Y K
Sbjct: 392 ----GVRPNEFTYSVILTALP-------VISPSEVHAQVVKTNYERSSTVGTALLDAYVK 440
Query: 537 CGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEV 596
G + + VF + ++++ W+ ++ Y G+ E A+++F + + I+PNE
Sbjct: 441 LGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGEL-----TKGGIKPNEF 495
Query: 597 TYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKT 656
T+ +I C+ + FH ++ S + L+ + + G +E A ++ K
Sbjct: 496 TFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKR 555
Query: 657 MPSNMKKVDAWSSLLGACKIH 677
K + +W+S++ H
Sbjct: 556 QRE--KDLVSWNSMISGYAQH 574
Score = 163 bits (412), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 215/459 (46%), Gaps = 40/459 (8%)
Query: 223 RIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALP 282
R+ A LF +D S+ +++ S++ R +EA ++ + G+ D +S L
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 283 ACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVA 342
+ L G+++H ++ +D+ VG++LVD Y GR VFD + R V
Sbjct: 102 VSATLCDELFGRQLHCQCIK-FGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVV 160
Query: 343 VWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEG---- 398
W +I+GYARN +DE + LF+ M E PNS T ++ L L +EG
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGT-QPNSFTFAAAL-------GVLAEEGVGGR 212
Query: 399 ---IHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVV 455
+H VVK G +K V N+L+++Y + G + ++ +F + + +V+WN+MI+GY
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 456 CGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYA 515
G +AL + + M+ ++ + + +V+ C ++H
Sbjct: 273 NGLDLEALGMFYSMRLNY-----------VRLSESSFASVIKLCANLKELRFTEQLHCSV 321
Query: 516 LKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMP-TRNVITWNVLIMAYGMHGKGEEA 574
+K D + +AL+ Y+KC + + +F ++ NV++W +I + + EEA
Sbjct: 322 VKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEA 381
Query: 575 LELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHY 634
++LF M K +RPNE TY I A ++ +K N+ E SS
Sbjct: 382 VDLFSEM-----KRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNY--ERSSTVG 431
Query: 635 ACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGA 673
L+D + G+VEEA K+ + K + AWS++L
Sbjct: 432 TALLDAYVKLGKVEEAAKVFSGIDD--KDIVAWSAMLAG 468
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 533 bits (1374), Expect = e-151, Method: Compositional matrix adjust.
Identities = 270/719 (37%), Positives = 421/719 (58%), Gaps = 67/719 (9%)
Query: 191 SLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLS 250
S KQ+HA R + + ++++Y L + EA LF +++W +VI +
Sbjct: 22 SQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFT 81
Query: 251 QNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALR---NTDLI 307
F +AL M SG PD S L +C+ + LR G+ +HG+ +R + DL
Sbjct: 82 DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL- 140
Query: 308 DNSFVGSALVDMYCNC------------------KKADKG------------------RW 331
+ G+AL++MY + ++ G R
Sbjct: 141 ---YTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRR 197
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCK 391
VF+ + R+ V +N +IAGYA++ ++A+++ EM +D P+S TLSS+LP
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM-GTTDLKPDSFTLSSVLPIFSEYV 256
Query: 392 AFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMIT 451
+ + IHGYV+++G + D Y+ ++L+DMY++ RIE S+ +F + RD +SWN+++
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 452 GYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEI 511
GYV GR+++AL L M + +KP +V +V+P C ++
Sbjct: 317 GYVQNGRYNEALRLFRQMVTAK-----------VKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 512 HAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKG 571
H Y L+ ++I + SAL+DMY+KCG + +R +FD+M + ++W +IM + +HG G
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHG 425
Query: 572 EEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSS 631
EA+ LF M + ++PN+V ++A+ ACSH G+VDE F++M +G+
Sbjct: 426 HEAVSLFEEM-----KRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQEL 480
Query: 632 DHYACLVDLLGRSGRVEEAYKLIKTM---PSNMKKVDAWSSLLGACKIHQNLEVGEIAAK 688
+HYA + DLLGR+G++EEAY I M P+ WS+LL +C +H+NLE+ E A+
Sbjct: 481 EHYAAVADLLGRAGKLEEAYNFISKMCVEPTG----SVWSTLLSSCSVHKNLELAEKVAE 536
Query: 689 QLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFL 748
++ ++ YVL+ N+Y+S G W + +R +M++ G+RK+P CSWIE +++ H F+
Sbjct: 537 KIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFV 596
Query: 749 AGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFG 808
+GD SHP +++E+L+ ++++M KEGYV DTS VLHDVD+E K +L GHSERLA+AFG
Sbjct: 597 SGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFG 656
Query: 809 LLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
++NT PGTTIRVTKN+R+C DCHVA KFISKI +REII+RD RFHHF G CSCGDYW
Sbjct: 657 IINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 195 bits (496), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 215/469 (45%), Gaps = 48/469 (10%)
Query: 34 RSPS--AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGK 91
+SP AW +R S F +A++++ M A+G PD+ FP+VLK+ + DL G+
Sbjct: 66 KSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE 125
Query: 92 QIHGHVFKFGYASTSVAVANSLVNMYGKC---GDLAGAHHVFDRISDR------------ 136
+HG + + G + N+L+NMY K G +VFD + R
Sbjct: 126 SVHGFIVRLG-MDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAE 184
Query: 137 ---------------------DHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFT 175
D VS+N++IA + ++ P SFT
Sbjct: 185 TCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFT 244
Query: 176 LVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLF 234
L S+ S D + GK++H Y R G D + ++LV MYAK RI++++ +F
Sbjct: 245 LSSVLPIFSEYVDVIK-GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL 303
Query: 235 DDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGK 294
+D +SWN++++ QN R+ EAL M+ + V+P V +S +PAC+HL L GK
Sbjct: 304 YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGK 363
Query: 295 EIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARN 354
++HGY LR N F+ SALVDMY C R +FD + W A+I G+A +
Sbjct: 364 QLHGYVLRG-GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALH 422
Query: 355 EFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVK-RGFEKDKY 413
EA+ LF EM + PN ++L AC + G + K G ++
Sbjct: 423 GHGHEAVSLFEEMKRQG-VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELE 481
Query: 414 VQNALMDMYSRMGRIEISKSIFGSMDRRDIVS-WNTMITGYVVCGRHDD 461
A+ D+ R G++E + + M S W+T+++ C H +
Sbjct: 482 HYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSS---CSVHKN 527
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 134/298 (44%), Gaps = 41/298 (13%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R +W + Q+ + +A+ + MV A V P AF +V+ A A + L+LGKQ+
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
HG+V + G+ S ++ +A++LV+MY KCG++ A +FDR++ D VSW ++I
Sbjct: 366 HGYVLRGGFGS-NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGH 424
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNA 213
V P V++ ACS++ GL + W F N+
Sbjct: 425 GHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHV--GLV-----------DEAWGYF--NS 469
Query: 214 LVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPD 273
+ +Y GL +++L + V L + + EEA F+ M V P
Sbjct: 470 MTKVY-------------GL--NQELEHYAAVADLLGRAGKLEEAYNFISKMC---VEPT 511
Query: 274 GVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRW 331
G ++ L +CS + L +++ +D+ +G+ + + CN A GRW
Sbjct: 512 GSVWSTLLSSCSVHKNLELAEKV----AEKIFTVDSENMGAYV--LMCNM-YASNGRW 562
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 533 bits (1373), Expect = e-151, Method: Compositional matrix adjust.
Identities = 298/828 (35%), Positives = 461/828 (55%), Gaps = 37/828 (4%)
Query: 55 AISTYANMVAAGVPP-DNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
A+S M G+ P D+ F ++LK+ D LGK +H + +F SV + NSL
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSV-LYNSL 103
Query: 114 VNMYGKCGDLAGAHHVFD---RISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD 170
+++Y K GD A A VF+ R RD VSW++M+A +
Sbjct: 104 ISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV 163
Query: 171 PTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRT--FTNNALVTMYAK-LGRIDEA 227
P + ++ ACSN D + +G+ + + G + + +L+ M+ K + A
Sbjct: 164 PNDYCYTAVIRACSN-SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222
Query: 228 KALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHL 287
+F + ++V+W +I+ Q EA+ F M+ SG D TL+S AC+ L
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282
Query: 288 EMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCK---KADKGRWVFDGILRRTVAVW 344
E L GK++H +A+R + L+D+ V +LVDMY C D R VFD + +V W
Sbjct: 283 ENLSLGKQLHSWAIR-SGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 345 NAMIAGYARN-EFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYV 403
A+I GY +N EAI LF EM+ + PN T SS AC + + G
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 399
Query: 404 VKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDAL 463
KRG + V N+++ M+ + R+E ++ F S+ +++VS+NT + G + A
Sbjct: 400 FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAF 459
Query: 464 NLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATD 523
LL ++ + L ++ T ++L G +IH+ +K L+ +
Sbjct: 460 KLLSEITERE-----------LGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCN 508
Query: 524 IAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVA 583
V +ALI MY+KCG ++ + VF+ M RNVI+W +I + HG LE F +M+
Sbjct: 509 QPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIE 568
Query: 584 EKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGR 643
E ++PNEVTY+AI +ACSH G+V EG F++M +H I+P +HYAC+VDLL R
Sbjct: 569 EG-----VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCR 623
Query: 644 SGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVL 703
+G + +A++ I TMP V W + LGAC++H N E+G++AA+++L L+PN + Y+
Sbjct: 624 AGLLTDAFEFINTMPFQ-ADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQ 682
Query: 704 LSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEY 763
LSNIY+ AG W+++ ++R+KMKE + KE GCSWIE D++HKF GD +HP + ++++
Sbjct: 683 LSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDE 742
Query: 764 LENLLQRMRKEGYVPDTSCVLHDVDDEEKET----MLCGHSERLAIAFGLLNTPPGTTIR 819
L+ L+ +++ GYVPDT VLH +++E E +L HSE++A+AFGL++T +R
Sbjct: 743 LDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVR 802
Query: 820 VTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
V KNLRVC DCH A K+IS + REI+LRD+ RFHHF++G CSC DYW
Sbjct: 803 VFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 165/340 (48%), Gaps = 12/340 (3%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+AI + +MV +G D F +V A A + +L+LGKQ+H + G V SL
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD---VECSL 308
Query: 114 VNMYGKC---GDLAGAHHVFDRISDRDHVSWNSMIAAACR--FXXXXXXXXXXXXXXXXN 168
V+MY KC G + VFDR+ D +SW ++I + +
Sbjct: 309 VDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH 368
Query: 169 VDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEA 227
V+P FT S AC NL D +GKQV F+ G + N++++M+ K R+++A
Sbjct: 369 VEPNHFTFSSAFKACGNLSDP-RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDA 427
Query: 228 KALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHL 287
+ F +K+LVS+NT + +N FE+A L + + + T AS L +++
Sbjct: 428 QRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANV 487
Query: 288 EMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAM 347
+R G++IH ++ L N V +AL+ MY C D VF+ + R V W +M
Sbjct: 488 GSIRKGEQIHSQVVK-LGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSM 546
Query: 348 IAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
I G+A++ F ++ F +M+ E PN T ++L AC
Sbjct: 547 ITGFAKHGFAIRVLETFNQMI-EEGVKPNEVTYVAILSAC 585
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Query: 51 SFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVA 110
+F QA + + + F F ++L A V + G+QIH V K G S + V
Sbjct: 454 NFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL-SCNQPVC 512
Query: 111 NSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD 170
N+L++MY KCG + A VF+ + +R+ +SW SMI + V
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572
Query: 171 PTSFTLVSIAHACSNL 186
P T V+I ACS++
Sbjct: 573 PNEVTYVAILSACSHV 588
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 524 bits (1349), Expect = e-148, Method: Compositional matrix adjust.
Identities = 292/817 (35%), Positives = 453/817 (55%), Gaps = 25/817 (3%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+ I Y M GV + + V+ + + D +LG+QI G V K G S +AV NSL
Sbjct: 143 EVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES-KLAVENSL 201
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
++M G G++ A+++FD++S+RD +SWNS+ AA + + + S
Sbjct: 202 ISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNS 261
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFG 232
T+ ++ ++ D G+ +H + G D N L+ MYA GR EA +F
Sbjct: 262 TTVSTLLSVLGHV-DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFK 320
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRT 292
KDL+SWN++++S + R +AL L M+ SG + VT SAL AC +
Sbjct: 321 QMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEK 380
Query: 293 GKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYA 352
G+ +HG + + L N +G+ALV MY + + R V + RR V WNA+I GYA
Sbjct: 381 GRILHGLVVV-SGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 439
Query: 353 RNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDK-EGIHGYVVKRGFEKD 411
+E D+A+ F M E + N T+ S+L AC+ L++ + +H Y+V GFE D
Sbjct: 440 EDEDPDKALAAFQTMRVEG-VSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 498
Query: 412 KYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQR 471
++V+N+L+ MY++ G + S+ +F +D R+I++WN M+ G ++ L L+ M+
Sbjct: 499 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR- 557
Query: 472 GQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALI 531
S + + + L ++H A+K D + +A
Sbjct: 558 ----------SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAA 607
Query: 532 DMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEI 591
DMY+KCG + + R++ +WN+LI A G HG EE F M+ I
Sbjct: 608 DMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML-----EMGI 662
Query: 592 RPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAY 651
+P VT++++ ACSH G+VD+GL + + + G+EP+ +H C++DLLGRSGR+ EA
Sbjct: 663 KPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAE 722
Query: 652 KLIKTMPSNMKKVD-AWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSS 710
I MP MK D W SLL +CKIH NL+ G AA+ L LEP S YVL SN++++
Sbjct: 723 TFISKMP--MKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFAT 780
Query: 711 AGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQR 770
G W+ ++RK+M ++K+ CSW++ +D+V F GD +HPQ+ E++ LE++ +
Sbjct: 781 TGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKL 840
Query: 771 MRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDC 830
+++ GYV DTS L D D+E+KE L HSERLA+A+ L++TP G+T+R+ KNLR+C+DC
Sbjct: 841 IKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDC 900
Query: 831 HVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
H KF+S+++ R I+LRD RFHHF G CSC DYW
Sbjct: 901 HSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 234 bits (598), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 171/691 (24%), Positives = 321/691 (46%), Gaps = 31/691 (4%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDL-NLGKQ 92
R+ +W + + +L+ + + M G+ P +F +++ A + G Q
Sbjct: 21 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 80
Query: 93 IHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFX 152
+HG V K G S V V+ +++++YG G ++ + VF+ + DR+ VSW S++
Sbjct: 81 VHGFVAKSGLLS-DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 139
Query: 153 XXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTN 211
V ++ + +C L+D SLG+Q+ ++G + +
Sbjct: 140 EPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDE-SLGRQIIGQVVKSGLESKLAVE 198
Query: 212 NALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVR 271
N+L++M +G +D A +F ++D +SWN++ ++ +QN EE+ M +
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 258
Query: 272 PDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRW 331
+ T+++ L H++ + G+ IHG ++ V + L+ MY ++ +
Sbjct: 259 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK-MGFDSVVCVCNTLLRMYAGAGRSVEANL 317
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCK 391
VF + + + WN+++A + + +A+ L M+ S + N T +S L AC
Sbjct: 318 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI-SSGKSVNYVTFTSALAACFTPD 376
Query: 392 AFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMIT 451
F +HG VV G ++ + NAL+ MY ++G + S+ + M RRD+V+WN +I
Sbjct: 377 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG 436
Query: 452 GYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXE- 510
GY D AL M+ + N +T+++VL C +
Sbjct: 437 GYAEDEDPDKALAAFQTMRVE-----------GVSSNYITVVSVLSACLLPGDLLERGKP 485
Query: 511 IHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGK 570
+HAY + +D V ++LI MYAKCG L+ S+ +F+ + RN+ITWN ++ A HG
Sbjct: 486 LHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGH 545
Query: 571 GEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPS 630
GEE L+L +M + + ++ ++ +A + +++EG L H + G E
Sbjct: 546 GEEVLKLVSKM-----RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL-HGLAVKLGFEHD 599
Query: 631 SDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQL 690
S + D+ + G + E K++ PS + + +W+ L+ A H E E+ A
Sbjct: 600 SFIFNAAADMYSKCGEIGEVVKMLP--PSVNRSLPSWNILISALGRHGYFE--EVCATFH 655
Query: 691 LVLEPNVASHYVLLSNIY---SSAGLWDQAM 718
+LE + +V ++ S GL D+ +
Sbjct: 656 EMLEMGIKPGHVTFVSLLTACSHGGLVDKGL 686
Score = 210 bits (535), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 159/599 (26%), Positives = 269/599 (44%), Gaps = 28/599 (4%)
Query: 116 MYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFT 175
MY K G + A H+FD + R+ VSWN+M++ R + P+SF
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 176 LVSIAHACSNLRDGLSLGKQVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDEAKALFGLF 234
+ S+ AC G QVH + ++G + + A++ +Y G + ++ +F
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 235 DDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGK 294
D+++VSW +++ S EE + M GV + +++ + +C L+ G+
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 295 EIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARN 354
+I G ++ + L V ++L+ M + D ++FD + R WN++ A YA+N
Sbjct: 181 QIIGQVVK-SGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 355 EFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYV 414
+E+ ++F M D NSTT+S+LL GIHG VVK GF+ V
Sbjct: 240 GHIEESFRIFSLMRRFHD-EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298
Query: 415 QNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQD 474
N L+ MY+ GR + +F M +D++SWN+++ +V GR DAL LL M
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM----- 353
Query: 475 DEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMY 534
+S+ N VT + L C +H + L + +G+AL+ MY
Sbjct: 354 --ISSGKSV----NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMY 407
Query: 535 AKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPN 594
K G ++ SR V QMP R+V+ WN LI Y ++AL F+ M E + N
Sbjct: 408 GKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG-----VSSN 462
Query: 595 EVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLI 654
+T +++ +AC G + E H + G E L+ + + G + + L
Sbjct: 463 YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 522
Query: 655 KTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGL 713
+ + + + W+++L A H + E ++L L + S V L S GL
Sbjct: 523 NGLDN--RNIITWNAMLAANAHHGHGE-------EVLKLVSKMRSFGVSLDQFSFSEGL 572
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 520 bits (1340), Expect = e-147, Method: Compositional matrix adjust.
Identities = 257/677 (37%), Positives = 401/677 (59%), Gaps = 23/677 (3%)
Query: 194 KQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQN 252
KQ+HA G + F L+ + G I A+ +F + WN +I S+N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 253 DRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFV 312
+ F++ALL +M + V PD T L ACS L L+ G+ +H R + FV
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFR-LGFDADVFV 156
Query: 313 GSALVDMYCNCKKADKGRWVFDGIL--RRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYE 370
+ L+ +Y C++ R VF+G+ RT+ W A+++ YA+N EA+++F +M +
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM-RK 215
Query: 371 SDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEI 430
D P+ L S+L A + IH VVK G E + + +L MY++ G++
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 431 SKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSV 490
+K +F M +++ WN MI+GY G +A+++ H+M ++P+++
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD-----------VRPDTI 324
Query: 491 TLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQM 550
++ + + C ++ Y + D+ + SALIDM+AKCG + +R+VFD+
Sbjct: 325 SITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRT 384
Query: 551 PTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGM 610
R+V+ W+ +I+ YG+HG+ EA+ L+R M + PN+VT++ + AC+HSGM
Sbjct: 385 LDRDVVVWSAMIVGYGLHGRAREAISLYRAM-----ERGGVHPNDVTFLGLLMACNHSGM 439
Query: 611 VDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSL 670
V EG F+ M A+H I P HYAC++DLLGR+G +++AY++IK MP V W +L
Sbjct: 440 VREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ-PGVTVWGAL 497
Query: 671 LGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVR 730
L ACK H+++E+GE AA+QL ++P+ HYV LSN+Y++A LWD+ ++R +MKE G+
Sbjct: 498 LSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLN 557
Query: 731 KEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDE 790
K+ GCSW+E R + F GD SHP+ +E+ +E + R+++ G+V + LHD++DE
Sbjct: 558 KDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDE 617
Query: 791 EKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDV 850
E E LC HSER+AIA+GL++TP GT +R+TKNLR C +CH ATK ISK+VDREI++RD
Sbjct: 618 EAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDT 677
Query: 851 RRFHHFRNGTCSCGDYW 867
RFHHF++G CSCGDYW
Sbjct: 678 NRFHHFKDGVCSCGDYW 694
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 145/508 (28%), Positives = 240/508 (47%), Gaps = 23/508 (4%)
Query: 65 AGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLA 124
+G+ D+F + +++ +A L KQIH + G + + L++ GD+
Sbjct: 16 SGIHSDSF-YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITK-LIHASSSFGDIT 70
Query: 125 GAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACS 184
A VFD + WN++I R V P SFT + ACS
Sbjct: 71 FARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 130
Query: 185 NLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALF-GL-FDDKDLVS 241
L L +G+ VHA FR G D F N L+ +YAK R+ A+ +F GL ++ +VS
Sbjct: 131 GLSH-LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVS 189
Query: 242 WNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYAL 301
W ++S+ +QN EAL M + V+PD V L S L A + L+ L+ G+ IH +
Sbjct: 190 WTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249
Query: 302 RNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAI 361
+ I+ + S L MY C + + +FD + + +WNAMI+GYA+N + EAI
Sbjct: 250 KMGLEIEPDLLIS-LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAI 308
Query: 362 KLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDM 421
+F EM+ D P++ +++S + AC + + ++ YV + + D ++ +AL+DM
Sbjct: 309 DMFHEMI-NKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDM 367
Query: 422 YSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDE 481
+++ G +E ++ +F RD+V W+ MI GY + GR +A++L M+RG
Sbjct: 368 FAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG-------- 419
Query: 482 SIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLN 541
+ PN VT + +L C K+ + +ID+ + G L+
Sbjct: 420 ---VHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLD 476
Query: 542 LSRIVFDQMPTR-NVITWNVLIMAYGMH 568
+ V MP + V W L+ A H
Sbjct: 477 QAYEVIKCMPVQPGVTVWGALLSACKKH 504
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 208/425 (48%), Gaps = 11/425 (2%)
Query: 39 WIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVF 98
W +R ++++ F A+ Y+NM A V PD+F FP +LKA +G++ L +G+ +H VF
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 99 KFGYASTSVAVANSLVNMYGKCGDLAGAHHVFD--RISDRDHVSWNSMIAAACRFXXXXX 156
+ G+ V V N L+ +Y KC L A VF+ + +R VSW ++++A +
Sbjct: 147 RLGF-DADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205
Query: 157 XXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALV 215
+V P LVS+ +A + L+D L G+ +HA + G + +L
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQD-LKQGRSIHASVVKMGLEIEPDLLISLN 264
Query: 216 TMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGV 275
TMYAK G++ AK LF +L+ WN +IS ++N EA+ + M+ VRPD +
Sbjct: 265 TMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTI 324
Query: 276 TLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDG 335
++ SA+ AC+ + L + ++ Y R +D D+ F+ SAL+DM+ C + R VFD
Sbjct: 325 SITSAISACAQVGSLEQARSMYEYVGR-SDYRDDVFISSALIDMFAKCGSVEGARLVFDR 383
Query: 336 ILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLD 395
L R V VW+AMI GY + EAI L+ M PN T LL AC +
Sbjct: 384 TLDRDVVVWSAMIVGYGLHGRAREAISLYRAM-ERGGVHPNDVTFLGLLMACNHSGMVRE 442
Query: 396 KEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVS-WNTMITGYV 454
+ + ++D+ R G ++ + + M + V+ W +++
Sbjct: 443 GWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA-- 500
Query: 455 VCGRH 459
C +H
Sbjct: 501 -CKKH 504
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 127/262 (48%), Gaps = 5/262 (1%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+ +W + AQ+ ++A+ ++ M V PD A +VL A + DL G+ I
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
H V K G + SL MY KCG +A A +FD++ + + WN+MI+ +
Sbjct: 245 HASVVKMGL-EIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 303
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWR--TFTN 211
+V P + ++ S AC+ + L + ++ Y R+ D+R F +
Sbjct: 304 AREAIDMFHEMINKDVRPDTISITSAISACAQV-GSLEQARSMYEYVGRS-DYRDDVFIS 361
Query: 212 NALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVR 271
+AL+ M+AK G ++ A+ +F D+D+V W+ +I + R EA+ M + GV
Sbjct: 362 SALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVH 421
Query: 272 PDGVTLASALPACSHLEMLRTG 293
P+ VT L AC+H M+R G
Sbjct: 422 PNDVTFLGLLMACNHSGMVREG 443
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 517 bits (1332), Expect = e-146, Method: Compositional matrix adjust.
Identities = 285/766 (37%), Positives = 431/766 (56%), Gaps = 31/766 (4%)
Query: 106 SVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXX-XXXXX 164
+V ++ LVN+Y G++A A H FD I +RD +WN MI+ R
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 165 XXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGR 223
+ P T S+ AC + DG ++H + G W + +L+ +Y++
Sbjct: 145 LSSGLTPDYRTFPSVLKACRTVIDG----NKIHCLALKFGFMWDVYVAASLIHLYSRYKA 200
Query: 224 IDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRP-DGVTLASALP 282
+ A+ LF +D+ SWN +IS Q+ +EAL L +G+R D VT+ S L
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL-----TLSNGLRAMDSVTVVSLLS 255
Query: 283 ACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVA 342
AC+ G IH Y++++ L FV + L+D+Y + + VFD + R +
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKH-GLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLI 314
Query: 343 VWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGY 402
WN++I Y NE AI LF EM S P+ TL SL + + G+
Sbjct: 315 SWNSIIKAYELNEQPLRAISLFQEMRL-SRIQPDCLTLISLASILSQLGDIRACRSVQGF 373
Query: 403 VVKRG-FEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDD 461
+++G F +D + NA++ MY+++G ++ ++++F + D++SWNT+I+GY G +
Sbjct: 374 TLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASE 433
Query: 462 ALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLA 521
A+ + + M+ E + N T ++VLP C ++H LK L
Sbjct: 434 AIEMYNIME----------EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLY 483
Query: 522 TDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRM 581
D+ V ++L DMY KCG L + +F Q+P N + WN LI +G HG GE+A+ LF+ M
Sbjct: 484 LDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM 543
Query: 582 VAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLL 641
+ E ++P+ +T++ + +ACSHSG+VDEG F M+ ++GI PS HY C+VD+
Sbjct: 544 LDEG-----VKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMY 598
Query: 642 GRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHY 701
GR+G++E A K IK+M S W +LL AC++H N+++G+IA++ L +EP ++
Sbjct: 599 GRAGQLETALKFIKSM-SLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYH 657
Query: 702 VLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELH 761
VLLSN+Y+SAG W+ +IR G+RK PG S +E ++V F G+ +HP +E++
Sbjct: 658 VLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMY 717
Query: 762 EYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVT 821
L L +++ GYVPD VL DV+D+EKE +L HSERLAIAF L+ TP TTIR+
Sbjct: 718 RELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIF 777
Query: 822 KNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
KNLRVC DCH TKFISKI +REII+RD RFHHF+NG CSCGDYW
Sbjct: 778 KNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 239 bits (609), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 178/634 (28%), Positives = 295/634 (46%), Gaps = 80/634 (12%)
Query: 47 AQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTS 106
SS ++ S + M+++G+ PD FP+VLKA V D G +IH KFG+
Sbjct: 131 GNSSEVIRCFSLF--MLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFM-WD 184
Query: 107 VAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXX 166
V VA SL+++Y + + A +FD + RD SWN+MI+ C+
Sbjct: 185 VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA 244
Query: 167 XNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRID 225
+ S T+VS+ AC+ D + G +H+Y+ ++G + F +N L+ +YA+ GR+
Sbjct: 245 MD----SVTVVSLLSACTEAGD-FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 226 EAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACS 285
+ + +F +DL+SWN++I + N++ A+ M S ++PD +TL S S
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 286 HLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWN 345
L +R + + G+ LR +++ +G+A+V MY D R VF+ + V WN
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWN 419
Query: 346 AMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVK 405
+I+GYA+N F EAI+++ M E + N T S+LPAC + A +HG ++K
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK 479
Query: 406 RGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNL 465
G D +V +L DMY + GR+E + S+F + R + V WNT+I + G + A+ L
Sbjct: 480 NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVML 539
Query: 466 LHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIA 525
+M DE + KP+ +T +T+L C
Sbjct: 540 FKEML---------DEGV--KPDHITFVTLLSACSH------------------------ 564
Query: 526 VGSALIDMYAKCGCLNLSRIVFDQMPTRNVIT-----WNVLIMAYGMHGKGEEALELFRR 580
S L+D C F+ M T IT + ++ YG G+ E AL+ +
Sbjct: 565 --SGLVDEGQWC---------FEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKS 613
Query: 581 MVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDH--YACLV 638
M ++P+ + A+ +AC G VD G + + H E +H Y L+
Sbjct: 614 M--------SLQPDASIWGALLSACRVHGNVDLG-----KIASEHLFEVEPEHVGYHVLL 660
Query: 639 DLLGRSGRVEEAYKLIKTMP--SNMKKVDAWSSL 670
+ S E I+++ ++K WSS+
Sbjct: 661 SNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSM 694
Score = 160 bits (406), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 217/452 (48%), Gaps = 48/452 (10%)
Query: 290 LRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIA 349
L++ K +H L + I N + + LV++YC R FD I R V WN MI+
Sbjct: 67 LQSAKCLHA-RLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 350 GYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFE 409
GY R E I+ F + S TP+ T S+L A C+ +D IH +K GF
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKA---CRTVIDGNKIHCLALKFGFM 182
Query: 410 KDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDM 469
D YV +L+ +YSR + ++ +F M RD+ SWN MI+GY G +AL L + +
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 470 QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSA 529
R D SVT++++L C IH+Y++K L +++ V +
Sbjct: 243 -RAMD--------------SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNK 287
Query: 530 LIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNK 589
LID+YA+ G L + VFD+M R++I+WN +I AY ++ + A+ LF+ M +
Sbjct: 288 LIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR---- 343
Query: 590 EIRPNEVTYIAIFAACSHSGMVDEGLNL-FHTMKANHGIEPSSDHYACLVDLLGRSGRVE 648
I+P+ +T I++ + S G + ++ T++ +E + A +V + + G V+
Sbjct: 344 -IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVV-MYAKLGLVD 401
Query: 649 EAYKLIKTMPSNMKKVDAWSSLLG----------ACKIHQNL-EVGEIAAKQLLVLEPNV 697
A + +P+ V +W++++ A +++ + E GEIAA Q
Sbjct: 402 SARAVFNWLPNT--DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQ-------- 451
Query: 698 ASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGV 729
+V + S AG Q M + ++ + G+
Sbjct: 452 -GTWVSVLPACSQAGALRQGMKLHGRLLKNGL 482
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 507 bits (1305), Expect = e-143, Method: Compositional matrix adjust.
Identities = 286/809 (35%), Positives = 447/809 (55%), Gaps = 25/809 (3%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+ I Y M GV + + V+ + + D +LG+QI G V K G S +AV NSL
Sbjct: 126 EVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES-KLAVENSL 184
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
++M G G++ A+++FD++S+RD +SWNS+ AA + + + S
Sbjct: 185 ISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNS 244
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFG 232
T+ ++ ++ D G+ +H + G D N L+ MYA GR EA +F
Sbjct: 245 TTVSTLLSVLGHV-DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFK 303
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRT 292
KDL+SWN++++S + R +AL L M+ SG + VT SAL AC +
Sbjct: 304 QMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEK 363
Query: 293 GKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYA 352
G+ +HG + + L N +G+ALV MY + + R V + RR V WNA+I GYA
Sbjct: 364 GRILHGLVVV-SGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 422
Query: 353 RNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDK-EGIHGYVVKRGFEKD 411
+E D+A+ F M E + N T+ S+L AC+ L++ + +H Y+V GFE D
Sbjct: 423 EDEDPDKALAAFQTMRVEG-VSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 481
Query: 412 KYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQR 471
++V+N+L+ MY++ G + S+ +F +D R+I++WN M+ G ++ L L+ M+
Sbjct: 482 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR- 540
Query: 472 GQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALI 531
S + + + L ++H A+K D + +A
Sbjct: 541 ----------SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAA 590
Query: 532 DMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEI 591
DMY+KCG + + R++ +WN+LI A G HG EE F M+ I
Sbjct: 591 DMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML-----EMGI 645
Query: 592 RPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAY 651
+P VT++++ ACSH G+VD+GL + + + G+EP+ +H C++DLLGRSGR+ EA
Sbjct: 646 KPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAE 705
Query: 652 KLIKTMPSNMKKVD-AWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSS 710
I MP MK D W SLL +CKIH NL+ G AA+ L LEP S YVL SN++++
Sbjct: 706 TFISKMP--MKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFAT 763
Query: 711 AGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQR 770
G W+ ++RK+M ++K+ CSW++ +D+V F GD +HPQ+ E++ LE++ +
Sbjct: 764 TGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKL 823
Query: 771 MRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDC 830
+++ GYV DTS L D D+E+KE L HSERLA+A+ L++TP G+T+R+ KNLR+C+DC
Sbjct: 824 IKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDC 883
Query: 831 HVATKFISKIVDREIILRDVRRFHHFRNG 859
H KF+S+++ R I+LRD RFHHF G
Sbjct: 884 HSVYKFVSRVIGRRIVLRDQYRFHHFERG 912
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 171/691 (24%), Positives = 321/691 (46%), Gaps = 31/691 (4%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDL-NLGKQ 92
R+ +W + + +L+ + + M G+ P +F +++ A + G Q
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63
Query: 93 IHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFX 152
+HG V K G S V V+ +++++YG G ++ + VF+ + DR+ VSW S++
Sbjct: 64 VHGFVAKSGLLS-DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 122
Query: 153 XXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTN 211
V ++ + +C L+D SLG+Q+ ++G + +
Sbjct: 123 EPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDE-SLGRQIIGQVVKSGLESKLAVE 181
Query: 212 NALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVR 271
N+L++M +G +D A +F ++D +SWN++ ++ +QN EE+ M +
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241
Query: 272 PDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRW 331
+ T+++ L H++ + G+ IHG ++ V + L+ MY ++ +
Sbjct: 242 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK-MGFDSVVCVCNTLLRMYAGAGRSVEANL 300
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCK 391
VF + + + WN+++A + + +A+ L M+ S + N T +S L AC
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI-SSGKSVNYVTFTSALAACFTPD 359
Query: 392 AFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMIT 451
F +HG VV G ++ + NAL+ MY ++G + S+ + M RRD+V+WN +I
Sbjct: 360 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG 419
Query: 452 GYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXE- 510
GY D AL M+ + N +T+++VL C +
Sbjct: 420 GYAEDEDPDKALAAFQTMRVE-----------GVSSNYITVVSVLSACLLPGDLLERGKP 468
Query: 511 IHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGK 570
+HAY + +D V ++LI MYAKCG L+ S+ +F+ + RN+ITWN ++ A HG
Sbjct: 469 LHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGH 528
Query: 571 GEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPS 630
GEE L+L +M + + ++ ++ +A + +++EG L H + G E
Sbjct: 529 GEEVLKLVSKM-----RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL-HGLAVKLGFEHD 582
Query: 631 SDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQL 690
S + D+ + G + E K++ PS + + +W+ L+ A H E E+ A
Sbjct: 583 SFIFNAAADMYSKCGEIGEVVKMLP--PSVNRSLPSWNILISALGRHGYFE--EVCATFH 638
Query: 691 LVLEPNVASHYVLLSNIY---SSAGLWDQAM 718
+LE + +V ++ S GL D+ +
Sbjct: 639 EMLEMGIKPGHVTFVSLLTACSHGGLVDKGL 669
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 118/248 (47%), Gaps = 26/248 (10%)
Query: 438 MDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLP 497
M R+ VSWNTM++G V G + + + M + +KP+S + +++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC-----------DLGIKPSSFVIASLVT 49
Query: 498 GCXXXXXX-XXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVI 556
C ++H + K L +D+ V +A++ +Y G ++ SR VF++MP RNV+
Sbjct: 50 ACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVV 109
Query: 557 TWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLN 616
+W L++ Y G+ EE +++++ M E + NE + + ++C + DE L
Sbjct: 110 SWTSLMVGYSDKGEPEEVIDIYKGMRGEG-----VGCNENSMSLVISSCGL--LKDESLG 162
Query: 617 ---LFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGA 673
+ +K+ G+E L+ +LG G V+ A + M + +W+S+ A
Sbjct: 163 RQIIGQVVKS--GLESKLAVENSLISMLGSMGNVDYANYIFDQMSE--RDTISWNSIAAA 218
Query: 674 CKIHQNLE 681
+ ++E
Sbjct: 219 YAQNGHIE 226
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 506 bits (1302), Expect = e-143, Method: Compositional matrix adjust.
Identities = 267/702 (38%), Positives = 397/702 (56%), Gaps = 25/702 (3%)
Query: 168 NVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDE 226
++ P S T A S RD + G+ +H +G D + +V MY K R+++
Sbjct: 114 DLKPNSSTYAFAISAASGFRDDRA-GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVED 172
Query: 227 AKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHML-QSGVRPDGVTLASALPACS 285
A+ +F +KD + WNT+IS +N+ + E++ ++ +S R D TL LPA +
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA 232
Query: 286 HLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWN 345
L+ LR G +IH A + T + +V + + +Y C K G +F + + +N
Sbjct: 233 ELQELRLGMQIHSLATK-TGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYN 291
Query: 346 AMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVK 405
AMI GY N + ++ LF E++ S S+TL SL+P IHGY +K
Sbjct: 292 AMIHGYTSNGETELSLSLFKELML-SGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLK 347
Query: 406 RGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNL 465
F V AL +YS++ IE ++ +F + + SWN MI+GY G +DA++L
Sbjct: 348 SNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISL 407
Query: 466 LHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIA 525
+MQ+ + PN VT+ +L C +H + I
Sbjct: 408 FREMQKSE-----------FSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIY 456
Query: 526 VGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEK 585
V +ALI MYAKCG + +R +FD M +N +TWN +I YG+HG+G+EAL +F M+
Sbjct: 457 VSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEML--- 513
Query: 586 DSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSG 645
N I P VT++ + ACSH+G+V EG +F++M +G EPS HYAC+VD+LGR+G
Sbjct: 514 --NSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAG 571
Query: 646 RVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLS 705
++ A + I+ M S W +LLGAC+IH++ + +++L L+P+ ++VLLS
Sbjct: 572 HLQRALQFIEAM-SIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLS 630
Query: 706 NIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLE 765
NI+S+ + QA +R+ K+ + K PG + IE + H F +GD SHPQ KE++E LE
Sbjct: 631 NIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLE 690
Query: 766 NLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLR 825
L +MR+ GY P+T LHDV++EE+E M+ HSERLAIAFGL+ T PGT IR+ KNLR
Sbjct: 691 KLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLR 750
Query: 826 VCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
VC DCH TK ISKI +R I++RD RFHHF++G CSCGDYW
Sbjct: 751 VCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 214 bits (544), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 154/557 (27%), Positives = 269/557 (48%), Gaps = 46/557 (8%)
Query: 55 AISTYANM-VAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
++S +A++ + + P++ + + AA+G D G+ IHG G + + + +++
Sbjct: 102 SLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDG-CDSELLLGSNI 160
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACR---FXXXXXXXXXXXXXXXXNVD 170
V MY K + A VFDR+ ++D + WN+MI+ + + +D
Sbjct: 161 VKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLD 220
Query: 171 PTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDW-RTFTNNALVTMYAKLGRIDEAKA 229
T TL+ I A + L++ L LG Q+H+ + G + + +++Y+K G+I A
Sbjct: 221 TT--TLLDILPAVAELQE-LRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 230 LFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEM 289
LF F D+V++N +I + N E +L ++ SG R TL S +P HL +
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLML 337
Query: 290 LRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIA 349
+ IHGY L+ ++ + ++ V +AL +Y + + R +FD +++ WNAMI+
Sbjct: 338 IYA---IHGYCLK-SNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMIS 393
Query: 350 GYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFE 409
GY +N ++AI LF EM +S+F+PN T++ +L AC + A + +H V FE
Sbjct: 394 GYTQNGLTEDAISLFREM-QKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFE 452
Query: 410 KDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDM 469
YV AL+ MY++ G I ++ +F M +++ V+WNTMI+GY + G+ +ALN+ ++M
Sbjct: 453 SSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEM 512
Query: 470 QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXE-----IHAYALKQKLATDI 524
+ P VT + VL C E IH Y + +
Sbjct: 513 LNSG-----------ITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEP----SV 557
Query: 525 AVGSALIDMYAKCGCLNLSRIVFDQM---PTRNVITWNVLIMAYGMHGKGEEALELFRRM 581
+ ++D+ + G L + + M P +V W L+ A +H A R
Sbjct: 558 KHYACMVDILGRAGHLQRALQFIEAMSIEPGSSV--WETLLGACRIHKDTNLA-----RT 610
Query: 582 VAEKDSNKEIRPNEVTY 598
V+EK E+ P+ V Y
Sbjct: 611 VSEKLF--ELDPDNVGY 625
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 119/284 (41%), Gaps = 28/284 (9%)
Query: 372 DFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEIS 431
DF ST++S L H ++ GF D + L S +G I +
Sbjct: 25 DFFKRSTSISHLAQT-------------HAQIILHGFRNDISLLTKLTQRLSDLGAIYYA 71
Query: 432 KSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVT 491
+ IF S+ R D+ +N ++ G+ V +L++ +++ D LKPNS T
Sbjct: 72 RDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTD----------LKPNSST 121
Query: 492 LMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMP 551
+ IH A+ +++ +GS ++ MY K + +R VFD+MP
Sbjct: 122 YAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMP 181
Query: 552 TRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMV 611
++ I WN +I Y + E++++FR ++ E + R + T + I A + +
Sbjct: 182 EKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT----RLDTTTLLDILPAVAELQEL 237
Query: 612 DEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIK 655
G+ + H++ G + L + G+++ L +
Sbjct: 238 RLGMQI-HSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFR 280
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 497 bits (1279), Expect = e-140, Method: Compositional matrix adjust.
Identities = 261/649 (40%), Positives = 389/649 (59%), Gaps = 31/649 (4%)
Query: 230 LFGLFDDK-DLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLE 288
LF + DK D+ SWN+VI+ L+++ EALL M + + P + A+ ACS L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 289 MLRTGKEIHGYAL---RNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWN 345
+ +GK+ H A +D+ FV SAL+ MY C K + R VFD I +R + W
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDI----FVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWT 146
Query: 346 AMIAGYARNEFDDEAIKLFIEMVYESD-----FTPNSTTLSSLLPACVRCKAFLDKEGIH 400
+MI GY N +A+ LF +++ + + +S L S++ AC R A E IH
Sbjct: 147 SMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIH 206
Query: 401 GYVVKRGFEKDKYVQNALMDMYSRMGR--IEISKSIFGSMDRRDIVSWNTMITGYVVCGR 458
+V+KRGF++ V N L+D Y++ G + +++ IF + +D VS+N++++ Y G
Sbjct: 207 SFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266
Query: 459 HDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQ 518
++A + + + + + N++TL TVL IH ++
Sbjct: 267 SNEAFEVFRRLVKNKVVTF----------NAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 519 KLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELF 578
L D+ VG+++IDMY KCG + +R FD+M +NV +W +I YGMHG +ALELF
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELF 376
Query: 579 RRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLV 638
M+ + +RPN +T++++ AACSH+G+ EG F+ MK G+EP +HY C+V
Sbjct: 377 PAMI-----DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMV 431
Query: 639 DLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVA 698
DLLGR+G +++AY LI+ M + WSSLL AC+IH+N+E+ EI+ +L L+ +
Sbjct: 432 DLLGRAGFLQKAYDLIQRMKMKPDSI-IWSSLLAACRIHKNVELAEISVARLFELDSSNC 490
Query: 699 SHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSK 758
+Y+LLS+IY+ AG W +R MK G+ K PG S +E EVH FL GD HPQ +
Sbjct: 491 GYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQRE 550
Query: 759 ELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTI 818
+++E+L L +++ + GYV +TS V HDVD+EEKE L HSE+LAIAFG++NT PG+T+
Sbjct: 551 KIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTV 610
Query: 819 RVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
V KNLRVC+DCH K ISKIVDRE ++RD +RFHHF++G CSCGDYW
Sbjct: 611 NVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 170 bits (431), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/423 (30%), Positives = 203/423 (47%), Gaps = 26/423 (6%)
Query: 47 AQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTS 106
A+S +A+ +++M + P +FP +KA + + D+ GKQ H F FGY S
Sbjct: 52 ARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQS-D 110
Query: 107 VAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXX 166
+ V+++L+ MY CG L A VFD I R+ VSW SMI +
Sbjct: 111 IFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRG---YDLNGNALDAVSLFKD 167
Query: 167 XNVDPT---------SFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVT 216
VD S LVS+ ACS + L + +H++ + G D N L+
Sbjct: 168 LLVDENDDDDAMFLDSMGLVSVISACSRV-PAKGLTESIHSFVIKRGFDRGVSVGNTLLD 226
Query: 217 MYAKLGR--IDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRP-D 273
YAK G + A+ +F DKD VS+N+++S +Q+ EA ++++ V +
Sbjct: 227 AYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFN 286
Query: 274 GVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVF 333
+TL++ L A SH LR GK IH +R L D+ VG++++DMYC C + + R F
Sbjct: 287 AITLSTVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGRVETARKAF 345
Query: 334 DGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAF 393
D + + V W AMIAGY + +A++LF M+ +S PN T S+L AC A
Sbjct: 346 DRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI-DSGVRPNYITFVSVLAAC--SHAG 402
Query: 394 LDKEGIHGYVVKR---GFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRR-DIVSWNTM 449
L EG + + G E ++D+ R G ++ + + M + D + W+++
Sbjct: 403 LHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSL 462
Query: 450 ITG 452
+
Sbjct: 463 LAA 465
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 216/476 (45%), Gaps = 34/476 (7%)
Query: 129 VFDRISDR-DHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLR 187
+F+R D+ D SWNS+IA R ++ PT + ACS+L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 188 DGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVI 246
D S GKQ H F G F ++AL+ MY+ G++++A+ +F +++VSW ++I
Sbjct: 91 DIFS-GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 247 SSLSQNDRFEEALLFLYHML------QSGVRPDGVTLASALPACSHLEMLRTGKEIHGYA 300
N +A+ +L + D + L S + ACS + + IH +
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Query: 301 LRNTDLIDNSF-VGSALVDMYCNCKKADKG----RWVFDGILRRTVAVWNAMIAGYARNE 355
++ D VG+ L+D Y K + G R +FD I+ + +N++++ YA++
Sbjct: 210 IKRG--FDRGVSVGNTLLDAY--AKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSG 265
Query: 356 FDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQ 415
+EA ++F +V T N+ TLS++L A A + IH V++ G E D V
Sbjct: 266 MSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVG 325
Query: 416 NALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDD 475
+++DMY + GR+E ++ F M +++ SW MI GY + G AL L M
Sbjct: 326 TSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS--- 382
Query: 476 EYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVG--SALIDM 533
++PN +T ++VL C A+K + + + ++D+
Sbjct: 383 --------GVRPNYITFVSVLAACSHAGLHVEGWRWFN-AMKGRFGVEPGLEHYGCMVDL 433
Query: 534 YAKCGCLNLSRIVFDQMPTR-NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSN 588
+ G L + + +M + + I W+ L+ A +H K E E+ + E DS+
Sbjct: 434 LGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH-KNVELAEISVARLFELDSS 488
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 155/364 (42%), Gaps = 47/364 (12%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAA------GVPPDNFAFPAVLKAAAGVNDL 87
R+ +W +R + + L A+S + +++ + D+ +V+ A + V
Sbjct: 140 RNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAK 199
Query: 88 NLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGD--LAGAHHVFDRISDRDHVSWNSMI 145
L + IH V K G+ V+V N+L++ Y K G+ +A A +FD+I D+D VS+NS++
Sbjct: 200 GLTESIHSFVIKRGF-DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIM 258
Query: 146 AAACRFXXXXXXXXXXXXXXXXNVDP-TSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG 204
+ + V + TL ++ A S+ L +GK +H R G
Sbjct: 259 SVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSH-SGALRIGKCIHDQVIRMG 317
Query: 205 -DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLY 263
+ +++ MY K GR++ A+ F +K++ SW +I+ + +AL
Sbjct: 318 LEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFP 377
Query: 264 HMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNC 323
M+ SGVRP+ +T S L ACSH G + G+ N
Sbjct: 378 AMIDSGVRPNYITFVSVLAACSH-----AGLHVEGWRWFN-------------------- 412
Query: 324 KKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSL 383
A KGR+ + L + M+ R F +A L M P+S SSL
Sbjct: 413 --AMKGRFGVEPGLEH----YGCMVDLLGRAGFLQKAYDLIQRM----KMKPDSIIWSSL 462
Query: 384 LPAC 387
L AC
Sbjct: 463 LAAC 466
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 493 bits (1270), Expect = e-139, Method: Compositional matrix adjust.
Identities = 255/733 (34%), Positives = 404/733 (55%), Gaps = 68/733 (9%)
Query: 195 QVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQND 253
Q HA ++G + + L+ Y+ ++A + D + S++++I +L++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 254 RFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVG 313
F +++ M G+ PD L + C+ L + GK+IH + + L ++FV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCV-SGLDMDAFVQ 154
Query: 314 SALVDMYCNCKKADKGRWVFD--------------------GILRRTVAV---------- 343
++ MY C + R VFD G L V +
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 344 -----WNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEG 398
WN +++G+ R+ + EA+ +F + ++ F P+ T+SS+LP+ +
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMF-QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 399 IHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGR 458
IHGYV+K+G KDK V +A++DMY + G + S+F + + N ITG G
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 459 HDDALNLLHDM--------------------QRGQDDE----YEDDESIPLKPNSVTLMT 494
D AL + Q G+D E + + + +KPN VT+ +
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 495 VLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRN 554
+LP C H +A++ L ++ VGSALIDMYAKCG +NLS+IVF+ MPT+N
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Query: 555 VITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEG 614
++ WN L+ + MHGK +E + +F ++ + ++P+ +++ ++ +AC G+ DEG
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTR-----LKPDFISFTSLLSACGQVGLTDEG 508
Query: 615 LNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGAC 674
F M +GI+P +HY+C+V+LLGR+G+++EAY LIK MP W +LL +C
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSC-VWGALLNSC 567
Query: 675 KIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPG 734
++ N+++ EIAA++L LEP YVLLSNIY++ G+W + IR KM+ +G++K PG
Sbjct: 568 RLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPG 627
Query: 735 CSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKET 794
CSWI+ ++ V+ LAGD SHPQ ++ E ++ + + MRK G+ P+ LHDV+++E+E
Sbjct: 628 CSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQ 687
Query: 795 MLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFH 854
ML GHSE+LA+ FGLLNTP GT ++V KNLR+C DCH KFIS REI +RD RFH
Sbjct: 688 MLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFH 747
Query: 855 HFRNGTCSCGDYW 867
HF++G CSCGD+W
Sbjct: 748 HFKDGICSCGDFW 760
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 205/479 (42%), Gaps = 86/479 (17%)
Query: 92 QIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRF 151
Q H + K G A ++ L+ Y A V I D S++S+I A +
Sbjct: 36 QAHARILKSG-AQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 152 XXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFT 210
+ P S L ++ C+ L +GKQ+H + +G D F
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAEL-SAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 211 NNALVTMYAKLGRIDEAKALFGLFDDKD-------------------------------- 238
++ MY + GR+ +A+ +F DKD
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 239 ---LVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKE 295
+VSWN ++S +++ +EA++ + G PD VT++S LP+ EML G+
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 296 IHGYALRNTDLIDNSFVGSALVDMY-----------------------CNC--------K 324
IHGY ++ L D + SA++DMY CN
Sbjct: 274 IHGYVIKQGLLKDKCVI-SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 325 KADKGRWVFDGILRRT----VAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTL 380
DK +F+ +T V W ++IAG A+N D EA++LF EM + PN T+
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQV-AGVKPNHVTI 391
Query: 381 SSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDR 440
S+LPAC A HG+ V+ + +V +AL+DMY++ GRI +S+ +F M
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 441 RDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
+++V WN+++ G+ + G+ + +++ + R + LKP+ ++ ++L C
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR-----------LKPDFISFTSLLSAC 499
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 181/407 (44%), Gaps = 75/407 (18%)
Query: 52 FLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVAN 111
F Q+I ++ M + G+ PD+ P + K A ++ +GKQIH V V
Sbjct: 97 FTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHC-VSCVSGLDMDAFVQG 155
Query: 112 SLVNMYGKCGDLAGAHHVFDRISDRDH--------------------------------- 138
S+ +MY +CG + A VFDR+SD+D
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 139 --VSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQV 196
VSWN +++ R P T+ S+ + + + L++G+ +
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGD-SEMLNMGRLI 274
Query: 197 HAYTFRNGDWR-TFTNNALVTMYAKLGR-------------------------------I 224
H Y + G + +A++ MY K G +
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 225 DEAKALFGLFDDK----DLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASA 280
D+A +F LF ++ ++VSW ++I+ +QN + EAL M +GV+P+ VT+ S
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 281 LPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRT 340
LPAC ++ L G+ HG+A+R L+DN VGSAL+DMY C + + + VF+ + +
Sbjct: 395 LPACGNIAALGHGRSTHGFAVR-VHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Query: 341 VAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
+ WN+++ G++ + E + +F E + + P+ + +SLL AC
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIF-ESLMRTRLKPDFISFTSLLSAC 499
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 117/276 (42%), Gaps = 38/276 (13%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+A+ + + G PD +VL + LN+G+ IHG+V K G V +++
Sbjct: 235 EAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDK-CVISAM 293
Query: 114 VNMYGKCGDLAGAHHVFDRIS-----------------------------------DRDH 138
++MYGK G + G +F++ + +
Sbjct: 294 IDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNV 353
Query: 139 VSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHA 198
VSW S+IA + V P T+ S+ AC N+ L G+ H
Sbjct: 354 VSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIA-ALGHGRSTHG 412
Query: 199 YTFRNGDW-RTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEE 257
+ R +AL+ MYAK GRI+ ++ +F + K+LV WN++++ S + + +E
Sbjct: 413 FAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKE 472
Query: 258 ALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTG 293
+ ++++ ++PD ++ S L AC + + G
Sbjct: 473 VMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W + AQ+ ++A+ + M AGV P++ P++L A + L G+ HG
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
+ + +V V ++L++MY KCG + + VF+ + ++ V WNS++
Sbjct: 415 VRV-HLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEV 473
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACSNL 186
+ P + S+ AC +
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQV 502
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 493 bits (1269), Expect = e-139, Method: Compositional matrix adjust.
Identities = 289/806 (35%), Positives = 437/806 (54%), Gaps = 39/806 (4%)
Query: 70 DNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHV 129
D+ A+ A+L+ ND K IH + K G + + N L+N Y K G A ++
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKG-SCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 130 FDRISDRDHVSWNSMIAA-ACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRD 188
FD + +R++VS+ ++ AC+ ++P FT S L+
Sbjct: 107 FDEMPERNNVSFVTLAQGYACQ---DPIGLYSRLHREGHELNPHVFT--------SFLKL 155
Query: 189 GLSLGKQ-----VHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSW 242
+SL K +H+ + G D F AL+ Y+ G +D A+ +F KD+V W
Sbjct: 156 FVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVW 215
Query: 243 NTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALR 302
++S +N FE++L L M +G P+ T +AL A L K +HG L+
Sbjct: 216 AGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILK 275
Query: 303 NTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIK 362
++D VG L+ +Y VF+ + + V W+ MIA + +N F +EA+
Sbjct: 276 TCYVLDPR-VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVD 334
Query: 363 LFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMY 422
LFI M E+ PN TLSS+L C K E +HG VVK GF+ D YV NAL+D+Y
Sbjct: 335 LFIRM-REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVY 393
Query: 423 SRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDES 482
++ +++ + +F + ++ VSWNT+I GY G A ++ + R Q
Sbjct: 394 AKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQ--------- 444
Query: 483 IPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNL 542
+ VT + L C ++H A+K A +AV ++LIDMYAKCG +
Sbjct: 445 --VSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKF 502
Query: 543 SRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIF 602
++ VF++M T +V +WN LI Y HG G +AL + M +++ +PN +T++ +
Sbjct: 503 AQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIM-----KDRDCKPNGLTFLGVL 557
Query: 603 AACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMK 662
+ CS++G++D+G F +M +HGIEP +HY C+V LLGRSG++++A KLI+ +P
Sbjct: 558 SGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYE-P 616
Query: 663 KVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRK 722
V W ++L A N E +A+++L + P + YVL+SN+Y+ A W IRK
Sbjct: 617 SVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRK 676
Query: 723 KMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSC 782
MKEMGV+KEPG SWIEH+ +VH F G + HP K ++ LE L + + GYVPD +
Sbjct: 677 SMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNA 736
Query: 783 VLHDVDDEEKETMLCGHSERLAIAFGLLNTPPG-TTIRVTKNLRVCNDCHVATKFISKIV 841
VL D+DDEEK+ L HSERLA+A+GL+ P I + KNLR+C+DCH A K IS IV
Sbjct: 737 VLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIV 796
Query: 842 DREIILRDVRRFHHFRNGTCSCGDYW 867
R++++RD+ RFHHF G CSCGD+W
Sbjct: 797 QRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 162 bits (410), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 194/418 (46%), Gaps = 9/418 (2%)
Query: 39 WIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVF 98
W + ++ F ++ + M AG P+N+ F LKA+ G+ + K +HG +
Sbjct: 215 WAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQIL 274
Query: 99 KFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXX 158
K Y V L+ +Y + GD++ A VF+ + D V W+ MIA C+
Sbjct: 275 KTCYV-LDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAV 333
Query: 159 XXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTM 217
V P FTL SI + C+ + LG+Q+H + G D + +NAL+ +
Sbjct: 334 DLFIRMREAFVVPNEFTLSSILNGCA-IGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDV 392
Query: 218 YAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTL 277
YAK ++D A LF K+ VSWNTVI +A L++ V VT
Sbjct: 393 YAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTF 452
Query: 278 ASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGIL 337
+SAL AC+ L + G ++HG A++ T+ V ++L+DMY C + VF+ +
Sbjct: 453 SSALGACASLASMDLGVQVHGLAIK-TNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME 511
Query: 338 RRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLD-- 395
VA WNA+I+GY+ + +A+++ ++++ + D PN T +L C +D
Sbjct: 512 TIDVASWNALISGYSTHGLGRQALRI-LDIMKDRDCKPNGLTFLGVLSGCSN-AGLIDQG 569
Query: 396 KEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEIS-KSIFGSMDRRDIVSWNTMITG 452
+E + G E ++ + R G+++ + K I G ++ W M++
Sbjct: 570 QECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 493 bits (1269), Expect = e-139, Method: Compositional matrix adjust.
Identities = 264/724 (36%), Positives = 404/724 (55%), Gaps = 83/724 (11%)
Query: 209 FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQS 268
F+ N +++ Y+K G +D F +D VSW T+I ++ +A+ + M++
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 269 GVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADK 328
G+ P TL + L + + + TGK++H + ++ L N V ++L++MY C
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVK-LGLRGNVSVSNSLLNMYAKCGDPMM 199
Query: 329 GRWVFDGILRRTVAVWNAMIA-------------------------------GYARNEFD 357
++VFD ++ R ++ WNAMIA G+ + +D
Sbjct: 200 AKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYD 259
Query: 358 DEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNA 417
A+ +F +M+ +S +P+ TL+S+L AC + + IH ++V GF+ V NA
Sbjct: 260 LRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNA 319
Query: 418 LMDMYSRMGRIEI---------------------------------SKSIFGSMDRRDIV 444
L+ MYSR G +E +K+IF S+ RD+V
Sbjct: 320 LISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVV 379
Query: 445 SWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXX 504
+W MI GY G + +A+NL M G +PNS TL +L
Sbjct: 380 AWTAMIVGYEQHGSYGEAINLFRSMVGGGQ-----------RPNSYTLAAMLSVASSLAS 428
Query: 505 XXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMP-TRNVITWNVLIM 563
+IH A+K ++V +ALI MYAK G + + FD + R+ ++W +I+
Sbjct: 429 LSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMII 488
Query: 564 AYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKA 623
A HG EEALELF M+ E +RP+ +TY+ +F+AC+H+G+V++G F MK
Sbjct: 489 ALAQHGHAEEALELFETMLMEG-----LRPDHITYVGVFSACTHAGLVNQGRQYFDMMKD 543
Query: 624 NHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVG 683
I P+ HYAC+VDL GR+G ++EA + I+ MP V W SLL AC++H+N+++G
Sbjct: 544 VDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIE-PDVVTWGSLLSACRVHKNIDLG 602
Query: 684 EIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDE 743
++AA++LL+LEP + Y L+N+YS+ G W++A IRK MK+ V+KE G SWIE + +
Sbjct: 603 KVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHK 662
Query: 744 VHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERL 803
VH F D +HP+ E++ ++ + ++K GYVPDT+ VLHD+++E KE +L HSE+L
Sbjct: 663 VHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKL 722
Query: 804 AIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSC 863
AIAFGL++TP TT+R+ KNLRVCNDCH A KFISK+V REII+RD RFHHF++G CSC
Sbjct: 723 AIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSC 782
Query: 864 GDYW 867
DYW
Sbjct: 783 RDYW 786
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 168/641 (26%), Positives = 259/641 (40%), Gaps = 134/641 (20%)
Query: 111 NSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD 170
N++++ Y K GD+ FD++ RD VSW +MI ++
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 171 PTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAK--------- 220
PT FTL ++ + + R + GK+VH++ + G +N+L+ MYAK
Sbjct: 144 PTQFTLTNVLASVAATR-CMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKF 202
Query: 221 ----------------------LGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEA 258
+G++D A A F ++D+V+WN++IS +Q A
Sbjct: 203 VFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRA 262
Query: 259 LLFLYHMLQ-SGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALV 317
L ML+ S + PD TLAS L AC++LE L GK+IH + + T + V +AL+
Sbjct: 263 LDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIV-TTGFDISGIVLNALI 321
Query: 318 DMYCNCKKADKGR-----------------WVFDGILR----------------RTVAVW 344
MY C + R + DG ++ R V W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381
Query: 345 NAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVV 404
AMI GY ++ EAI LF MV PNS TL+++L + + IHG V
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQ-RPNSYTLAAMLSVASSLASLSHGKQIHGSAV 440
Query: 405 KRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD-RRDIVSWNTMITGYVVCGRHDDAL 463
K G V NAL+ MY++ G I + F + RD VSW +MI G ++AL
Sbjct: 441 KSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEAL 500
Query: 464 NLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATD 523
L M L+P+ +T + V C HA
Sbjct: 501 ELFETMLME-----------GLRPDHITYVGVFSACT-----------HA---------- 528
Query: 524 IAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVIT-----WNVLIMAYGMHGKGEEALELF 578
G +N R FD M + I + ++ +G G +EA E
Sbjct: 529 --------------GLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFI 574
Query: 579 RRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEP-SSDHYACL 637
+M I P+ VT+ ++ +AC +D G + +EP +S Y+ L
Sbjct: 575 EKM--------PIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLL---LEPENSGAYSAL 623
Query: 638 VDLLGRSGRVEEAYKLIKTMP-SNMKKVDAWSSLLGACKIH 677
+L G+ EEA K+ K+M +KK +S + K+H
Sbjct: 624 ANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVH 664
Score = 161 bits (408), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/492 (26%), Positives = 211/492 (42%), Gaps = 81/492 (16%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R +W + + +AI +MV G+ P F VL + A + GK++
Sbjct: 109 RDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKV 168
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
H + K G +V+V+NSL+NMY KCGD A VFDR+ RD SWN+MIA +
Sbjct: 169 HSFIVKLGLRG-NVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQ 227
Query: 154 XXXXXXXXXXXXXXNV--------------------------------DPTSFTLVSIAH 181
++ P FTL S+
Sbjct: 228 MDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLS 287
Query: 182 ACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYA--------------------- 219
AC+NL + L +GKQ+H++ G D NAL++MY+
Sbjct: 288 ACANL-EKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLK 346
Query: 220 ------------KLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQ 267
KLG +++AK +F D+D+V+W +I Q+ + EA+ M+
Sbjct: 347 IEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVG 406
Query: 268 SGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKAD 327
G RP+ TLA+ L S L L GK+IHG A+++ ++ S V +AL+ MY
Sbjct: 407 GGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVS-VSNALITMYAKAGNIT 465
Query: 328 KGRWVFDGI-LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPA 386
FD I R W +MI A++ +EA++LF M+ E P+ T + A
Sbjct: 466 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEG-LRPDHITYVGVFSA 524
Query: 387 CVRCKAFLDKEGIHGYVVKRGFEKDKYVQN-----ALMDMYSRMGRIEISKSIFGSMD-R 440
C A L +G + + + + DK + ++D++ R G ++ ++ M
Sbjct: 525 CTH--AGLVNQGRQYFDMMK--DVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIE 580
Query: 441 RDIVSWNTMITG 452
D+V+W ++++
Sbjct: 581 PDVVTWGSLLSA 592
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 130/316 (41%), Gaps = 56/316 (17%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R AW + Q S+ +AI+ + +MV G P+++ A+L A+ + L+ GKQI
Sbjct: 376 RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQI 435
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRIS-DRDHVSWNSMIAAACRFX 152
HG K G SV+V+N+L+ MY K G++ A FD I +RD VSW SMI A +
Sbjct: 436 HGSAVKSGEI-YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHG 494
Query: 153 XXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNN 212
+ P T V + AC+ HA
Sbjct: 495 HAEEALELFETMLMEGLRPDHITYVGVFSACT------------HA-------------- 528
Query: 213 ALVTMYAKLGRIDEAKALFGLFDDKD-----LVSWNTVISSLSQNDRFEEALLFLYHMLQ 267
G +++ + F + D D L + ++ + +EA F+ M
Sbjct: 529 ---------GLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM-- 577
Query: 268 SGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLI--DNSFVGSALVDMYCNCKK 325
+ PD VT S L AC + + GK A L+ +NS SAL ++Y C
Sbjct: 578 -PIEPDVVTWGSLLSACRVHKNIDLGK----VAAERLLLLEPENSGAYSALANLYSAC-- 630
Query: 326 ADKGRWVFDGILRRTV 341
G+W +R+++
Sbjct: 631 ---GKWEEAAKIRKSM 643
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 491 bits (1263), Expect = e-138, Method: Compositional matrix adjust.
Identities = 255/682 (37%), Positives = 413/682 (60%), Gaps = 22/682 (3%)
Query: 188 DGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVI 246
D L+LG+QVH + G D +N+L+ MY KL + A+ +F ++DL+SWN+VI
Sbjct: 329 DSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVI 388
Query: 247 SSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHL-EMLRTGKEIHGYALRNTD 305
+ ++QN EA+ +L+ G++PD T+ S L A S L E L K++H +A++ +
Sbjct: 389 AGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINN 448
Query: 306 LIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFI 365
+ D SFV +AL+D Y + + +F+ VA WNAM+AGY ++ + +KLF
Sbjct: 449 VSD-SFVSTALIDAYSRNRCMKEAEILFERHNFDLVA-WNAMMAGYTQSHDGHKTLKLF- 505
Query: 366 EMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRM 425
++++ + TL+++ C A + +H Y +K G++ D +V + ++DMY +
Sbjct: 506 ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC 565
Query: 426 GRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPL 485
G + ++ F S+ D V+W TMI+G + G + A ++ M+ + +
Sbjct: 566 GDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL-----------MGV 614
Query: 486 KPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRI 545
P+ T+ T+ +IHA ALK D VG++L+DMYAKCG ++ +
Sbjct: 615 LPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYC 674
Query: 546 VFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAAC 605
+F ++ N+ WN +++ HG+G+E L+LF++M + I+P++VT+I + +AC
Sbjct: 675 LFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQM-----KSLGIKPDKVTFIGVLSAC 729
Query: 606 SHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVD 665
SHSG+V E +M ++GI+P +HY+CL D LGR+G V++A LI++M S
Sbjct: 730 SHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESM-SMEASAS 788
Query: 666 AWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMK 725
+ +LL AC++ + E G+ A +LL LEP +S YVLLSN+Y++A WD+ R MK
Sbjct: 789 MYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMK 848
Query: 726 EMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLH 785
V+K+PG SWIE ++++H F+ D S+ Q++ ++ ++++++ +++EGYVP+T L
Sbjct: 849 GHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLV 908
Query: 786 DVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREI 845
DV++EEKE L HSE+LA+AFGLL+TPP T IRV KNLRVC DCH A K+I+K+ +REI
Sbjct: 909 DVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREI 968
Query: 846 ILRDVRRFHHFRNGTCSCGDYW 867
+LRD RFH F++G CSCGDYW
Sbjct: 969 VLRDANRFHRFKDGICSCGDYW 990
Score = 209 bits (533), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 217/453 (47%), Gaps = 16/453 (3%)
Query: 48 QSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSV 107
S + + +A+MV + V D F +L A V+ L LG+Q+H K G +
Sbjct: 292 HSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL-DLML 350
Query: 108 AVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXX 167
V+NSL+NMY K A VFD +S+RD +SWNS+IA +
Sbjct: 351 TVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC 410
Query: 168 NVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFR-NGDWRTFTNNALVTMYAKLGRIDE 226
+ P +T+ S+ A S+L +GLSL KQVH + + N +F + AL+ Y++ + E
Sbjct: 411 GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKE 470
Query: 227 AKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH 286
A+ LF + DLV+WN +++ +Q+ + L M + G R D TLA+ C
Sbjct: 471 AEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGF 529
Query: 287 LEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNA 346
L + GK++H YA+++ +D +V S ++DMY C ++ FD I W
Sbjct: 530 LFAINQGKQVHAYAIKSGYDLD-LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTT 588
Query: 347 MIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKR 406
MI+G N ++ A +F +M P+ T+++L A A IH +K
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMG-VLPDEFTIATLAKASSCLTALEQGRQIHANALKL 647
Query: 407 GFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLL 466
D +V +L+DMY++ G I+ + +F ++ +I +WN M+ G G + L L
Sbjct: 648 NCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLF 707
Query: 467 HDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
M+ S+ +KP+ VT + VL C
Sbjct: 708 KQMK-----------SLGIKPDKVTFIGVLSAC 729
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 151/605 (24%), Positives = 259/605 (42%), Gaps = 65/605 (10%)
Query: 78 LKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRD 137
L+ A +DL LGK H + F + N+L++MY KCG L A VFD++ DRD
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLI-NNLISMYSKCGSLTYARRVFDKMPDRD 104
Query: 138 HVSWNSMIAA-----ACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSL 192
VSWNS++AA C V + TL + C L G
Sbjct: 105 LVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLC--LHSGYVW 162
Query: 193 GKQ-VHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLS 250
+ H Y + G D F ALV +Y K G++ E K LF +D+V WN ++ +
Sbjct: 163 ASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYL 222
Query: 251 QNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNS 310
+ EEA+ SG+ P+ +TL R I G D+S
Sbjct: 223 EMGFKEEAIDLSSAFHSSGLNPNEITL-------------RLLARISG---------DDS 260
Query: 311 FVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYE 370
G V + N A V + I R N ++ Y + +K F +MV E
Sbjct: 261 DAGQ--VKSFANGNDASS---VSEIIFR------NKGLSEYLHSGQYSALLKCFADMV-E 308
Query: 371 SDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEI 430
SD + T +L V+ + + +H +K G + V N+L++MY ++ +
Sbjct: 309 SDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGF 368
Query: 431 SKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSV 490
++++F +M RD++SWN++I G G +A+ L + R LKP+
Sbjct: 369 ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR-----------CGLKPDQY 417
Query: 491 TLMTVLPGCXXX-XXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQ 549
T+ +VL ++H +A+K +D V +ALID Y++ C+ + I+F++
Sbjct: 418 TMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER 477
Query: 550 MPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSG 609
+++ WN ++ Y G + L+LF M + + R ++ T +F C
Sbjct: 478 -HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE-----RSDDFTLATVFKTCGFLF 531
Query: 610 MVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSS 669
+++G + H G + + ++D+ + G + A ++P + AW++
Sbjct: 532 AINQGKQV-HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP--VPDDVAWTT 588
Query: 670 LLGAC 674
++ C
Sbjct: 589 MISGC 593
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 192/399 (48%), Gaps = 16/399 (4%)
Query: 47 AQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVND-LNLGKQIHGHVFKFGYAST 105
AQ+ ++A+ + ++ G+ PD + +VLKAA+ + + L+L KQ+H H K S
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSD 451
Query: 106 SVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXX 165
S V+ +L++ Y + + A +F+R + D V+WN+M+A +
Sbjct: 452 SF-VSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMH 509
Query: 166 XXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRI 224
FTL ++ C L ++ GKQVHAY ++G D + ++ ++ MY K G +
Sbjct: 510 KQGERSDDFTLATVFKTCGFLF-AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDM 568
Query: 225 DEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPAC 284
A+ F D V+W T+IS +N E A M GV PD T+A+ A
Sbjct: 569 SAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKAS 628
Query: 285 SHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVW 344
S L L G++IH AL+ + ++ FVG++LVDMY C D +F I + W
Sbjct: 629 SCLTALEQGRQIHANALK-LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAW 687
Query: 345 NAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC----VRCKAFLDKEGIH 400
NAM+ G A++ E ++LF +M P+ T +L AC + +A+ +H
Sbjct: 688 NAMLVGLAQHGEGKETLQLFKQM-KSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMH 746
Query: 401 G-YVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSM 438
G Y +K E + L D R G ++ ++++ SM
Sbjct: 747 GDYGIKPEIEH----YSCLADALGRAGLVKQAENLIESM 781
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 118/250 (47%), Gaps = 3/250 (1%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
AW + QS + + +A M G D+F V K + +N GKQ+H +
Sbjct: 484 AWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYA 543
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
K GY + V++ +++MY KCGD++ A FD I D V+W +MI+
Sbjct: 544 IKSGY-DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERA 602
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFR-NGDWRTFTNNALVT 216
V P FT+ ++A A S L L G+Q+HA + N F +LV
Sbjct: 603 FHVFSQMRLMGVLPDEFTIATLAKASSCL-TALEQGRQIHANALKLNCTNDPFVGTSLVD 661
Query: 217 MYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVT 276
MYAK G ID+A LF + ++ +WN ++ L+Q+ +E L M G++PD VT
Sbjct: 662 MYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVT 721
Query: 277 LASALPACSH 286
L ACSH
Sbjct: 722 FIGVLSACSH 731
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 490 bits (1262), Expect = e-138, Method: Compositional matrix adjust.
Identities = 297/849 (34%), Positives = 462/849 (54%), Gaps = 37/849 (4%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVN--DLNLGK 91
++ +W + + +Q+ A +++M G P + F +++ A + D+ L +
Sbjct: 169 KNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLE 228
Query: 92 QIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRF 151
QI + K G T + V + LV+ + K G L+ A VF+++ R+ V+ N ++ R
Sbjct: 229 QIMCTIQKSGLL-TDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQ 287
Query: 152 X-XXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRD--GLSLGKQVHAYTFRNG--DW 206
+V P S+ ++ + +L + GL G++VH + G D+
Sbjct: 288 KWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDF 347
Query: 207 RTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHML 266
N LV MYAK G I +A+ +F DKD VSWN++I+ L QN F EA+ M
Sbjct: 348 MVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMR 407
Query: 267 QSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALR-NTDLIDNSFVGSALVDMYCNCKK 325
+ + P TL S+L +C+ L+ + G++IHG +L+ DL N V +AL+ +Y
Sbjct: 408 RHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL--NVSVSNALMTLYAETGY 465
Query: 326 ADKGRWVFDGILRRTVAVWNAMIAGYARNEFD-DEAIKLFIEMVYESDFTPNSTTLSSLL 384
++ R +F + WN++I AR+E EA+ F+ T S L
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLS 525
Query: 385 PACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSM-DRRDI 443
L K+ IHG +K + +NAL+ Y + G ++ + IF M +RRD
Sbjct: 526 AVSSLSFGELGKQ-IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDN 584
Query: 444 VSWNTMITGYVVCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXX 502
V+WN+MI+GY+ AL+L+ M Q GQ + +S TVL
Sbjct: 585 VTWNSMISGYIHNELLAKALDLVWFMLQTGQ------------RLDSFMYATVLSAFASV 632
Query: 503 XXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLI 562
E+HA +++ L +D+ VGSAL+DMY+KCG L+ + F+ MP RN +WN +I
Sbjct: 633 ATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMI 692
Query: 563 MAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMK 622
Y HG+GEEAL+LF M + + P+ VT++ + +ACSH+G+++EG F +M
Sbjct: 693 SGYARHGQGEEALKLFETM----KLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMS 748
Query: 623 ANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMK-KVDAWSSLLGAC--KIHQN 679
++G+ P +H++C+ D+LGR+G +++ I+ MP MK V W ++LGAC +
Sbjct: 749 DSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMP--MKPNVLIWRTVLGACCRANGRK 806
Query: 680 LEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIE 739
E+G+ AA+ L LEP A +YVLL N+Y++ G W+ + RKKMK+ V+KE G SW+
Sbjct: 807 AELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVT 866
Query: 740 HRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGH 799
+D VH F+AGD SHP + +++ L+ L ++MR GYVP T L+D++ E KE +L H
Sbjct: 867 MKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYH 926
Query: 800 SERLAIAFGLLNTPPGT-TIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRN 858
SE+LA+AF L T IR+ KNLRVC DCH A K+ISKI R+IILRD RFHHF++
Sbjct: 927 SEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQD 986
Query: 859 GTCSCGDYW 867
G CSC D+W
Sbjct: 987 GACSCSDFW 995
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 190/691 (27%), Positives = 315/691 (45%), Gaps = 44/691 (6%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNL--GKQIHGHVFKFGYASTSVAVAN 111
+A+ +MV G+ + +AF +VL+A + + + G+QIHG +FK YA +V V+N
Sbjct: 85 EALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV-VSN 143
Query: 112 SLVNMYGKC-GDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD 170
L++MY KC G + A F I ++ VSWNS+I+ +
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 171 PTSFTLVS-IAHACSNLRDGLSLGKQVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDEAK 228
PT +T S + ACS + L +Q+ ++G F + LV+ +AK G + A+
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263
Query: 229 ALFGLFDDKDLVSWNTVISSLSQNDRFEEAL-LFLYHMLQSGVRPDG-VTLASALPACSH 286
+F + ++ V+ N ++ L + EEA LF+ V P+ V L S+ P S
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSL 323
Query: 287 LEM--LRTGKEIHGYALRNTDLIDNSF-VGSALVDMYCNCKKADKGRWVFDGILRRTVAV 343
E L+ G+E+HG+ + T L+D +G+ LV+MY C R VF + +
Sbjct: 324 AEEVGLKKGREVHGHVI-TTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVS 382
Query: 344 WNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYV 403
WN+MI G +N EA++ + M D P S TL S L +C K + IHG
Sbjct: 383 WNSMITGLDQNGCFIEAVERYKSM-RRHDILPGSFTLISSLSSCASLKWAKLGQQIHGES 441
Query: 404 VKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRH--DD 461
+K G + + V NALM +Y+ G + + IF SM D VSWN++I R +
Sbjct: 442 LKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEA 501
Query: 462 ALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLA 521
+ L+ + GQ K N +T +VL +IH ALK +A
Sbjct: 502 VVCFLNAQRAGQ------------KLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIA 549
Query: 522 TDIAVGSALIDMYAKCGCLNLSRIVFDQMPT-RNVITWNVLIMAYGMHGKGEEALELFRR 580
+ +ALI Y KCG ++ +F +M R+ +TWN +I Y + +AL+L
Sbjct: 550 DEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWF 609
Query: 581 MVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDL 640
M+ R + Y + +A + ++ G+ + H +E + LVD+
Sbjct: 610 MLQTGQ-----RLDSFMYATVLSAFASVATLERGMEV-HACSVRACLESDVVVGSALVDM 663
Query: 641 LGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAK--QLLVLEPNVA 698
+ GR++ A + TMP ++ +W+S++ H GE A K + + L+
Sbjct: 664 YSKCGRLDYALRFFNTMP--VRNSYSWNSMISGYARHGQ---GEEALKLFETMKLDGQTP 718
Query: 699 SHYVLLSNIYSS---AGLWDQAMDIRKKMKE 726
+V + S+ AGL ++ + M +
Sbjct: 719 PDHVTFVGVLSACSHAGLLEEGFKHFESMSD 749
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 158/584 (27%), Positives = 264/584 (45%), Gaps = 30/584 (5%)
Query: 107 VAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXX 166
V + N+L+N Y + GD A VFD + R+ VSW +++ R
Sbjct: 36 VYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVK 95
Query: 167 XNVDPTSFTLVSIAHACSNLRD-GLSLGKQVHAYTFR-NGDWRTFTNNALVTMYAK-LGR 223
+ + VS+ AC + G+ G+Q+H F+ + +N L++MY K +G
Sbjct: 96 EGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGS 155
Query: 224 IDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASAL-P 282
+ A FG + K+ VSWN++IS SQ A M G RP T S +
Sbjct: 156 VGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTT 215
Query: 283 ACSHLEM-LRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTV 341
ACS E +R ++I ++ + L+ + FVGS LV + R VF+ + R
Sbjct: 216 ACSLTEPDVRLLEQIM-CTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNA 274
Query: 342 AVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNS-TTLSSLLPACVRCKAFLDKEG-- 398
N ++ G R ++ +EA KLF++M D +P S L S P + K+G
Sbjct: 275 VTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGRE 334
Query: 399 IHGYVVKRGFEKDKY-VQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCG 457
+HG+V+ G + N L++MY++ G I ++ +F M +D VSWN+MITG G
Sbjct: 335 VHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNG 394
Query: 458 RHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALK 517
+A+ M+R + P S TL++ L C +IH +LK
Sbjct: 395 CFIEAVERYKSMRRHD-----------ILPGSFTLISSLSSCASLKWAKLGQQIHGESLK 443
Query: 518 QKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKG-EEALE 576
+ +++V +AL+ +YA+ G LN R +F MP + ++WN +I A + EA+
Sbjct: 444 LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVV 503
Query: 577 LFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYAC 636
F + A++ K N +T+ ++ +A S + G + H + + I +
Sbjct: 504 CF--LNAQRAGQK---LNRITFSSVLSAVSSLSFGELGKQI-HGLALKNNIADEATTENA 557
Query: 637 LVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNL 680
L+ G+ G ++ K+ M V W+S++ IH L
Sbjct: 558 LIACYGKCGEMDGCEKIFSRMAERRDNV-TWNSMISG-YIHNEL 599
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/516 (24%), Positives = 229/516 (44%), Gaps = 38/516 (7%)
Query: 168 NVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDE 226
N P SF + H + + H+ ++N D + N L+ Y + G
Sbjct: 3 NCVPLSFVQSCVGHRGA--------ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVS 54
Query: 227 AKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH 286
A+ +F ++ VSW ++S S+N +EAL+FL M++ G+ + S L AC
Sbjct: 55 ARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQE 114
Query: 287 LEMLRT--GKEIHGYALRNTDLIDNSFVGSALVDMYCNC-KKADKGRWVFDGILRRTVAV 343
+ + G++IHG + + +D + V + L+ MY C F I +
Sbjct: 115 IGSVGILFGRQIHGLMFKLSYAVD-AVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVS 173
Query: 344 WNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLL-PACVRCKAFLD-KEGIHG 401
WN++I+ Y++ A ++F M Y+ P T SL+ AC + + E I
Sbjct: 174 WNSIISVYSQAGDQRSAFRIFSSMQYDGS-RPTEYTFGSLVTTACSLTEPDVRLLEQIMC 232
Query: 402 YVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDD 461
+ K G D +V + L+ +++ G + ++ +F M+ R+ V+ N ++ G V ++
Sbjct: 233 TIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEE 292
Query: 462 ALNLLHDMQRGQDDEYEDDESIPLKPNS-VTLMTVLP--GCXXXXXXXXXXEIHAYALKQ 518
A L DM + I + P S V L++ P E+H + +
Sbjct: 293 ATKLFMDM----------NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITT 342
Query: 519 KLAT-DIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALEL 577
L + +G+ L++MYAKCG + +R VF M ++ ++WN +I +G EA+E
Sbjct: 343 GLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVER 402
Query: 578 FRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACL 637
++ M +I P T I+ ++C+ G + H GI+ + L
Sbjct: 403 YKSM-----RRHDILPGSFTLISSLSSCASLKWAKLGQQI-HGESLKLGIDLNVSVSNAL 456
Query: 638 VDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGA 673
+ L +G + E K+ +MP + + +W+S++GA
Sbjct: 457 MTLYAETGYLNECRKIFSSMPEHDQV--SWNSIIGA 490
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 487 bits (1253), Expect = e-137, Method: Compositional matrix adjust.
Identities = 260/680 (38%), Positives = 386/680 (56%), Gaps = 19/680 (2%)
Query: 190 LSLGKQVHAYTFRNGDWRT--FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVIS 247
+ LG+ VHA + D F N L+ MY+KL + A+ + L +++VSW ++IS
Sbjct: 22 MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLIS 81
Query: 248 SLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLI 307
L+QN F AL+ + M + GV P+ T A A + L + TGK+IH A++ ++
Sbjct: 82 GLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRIL 141
Query: 308 DNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEM 367
D FVG + DMYC + D R +FD I R + WNA I+ + EAI+ FIE
Sbjct: 142 D-VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEF 200
Query: 368 VYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGR 427
D PNS T + L AC +HG V++ GF+ D V N L+D Y + +
Sbjct: 201 -RRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQ 259
Query: 428 IEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKP 487
I S+ IF M ++ VSW +++ YV D+ ++L+ R E D
Sbjct: 260 IRSSEIIFTEMGTKNAVSWCSLVAAYVQ-NHEDEKASVLYLRSRKDIVETSD-------- 310
Query: 488 NSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVF 547
+ +VL C IHA+A+K + I VGSAL+DMY KCGC+ S F
Sbjct: 311 --FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 548 DQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSH 607
D+MP +N++T N LI Y G+ + AL LF M PN +T++++ +ACS
Sbjct: 369 DEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPT---PNYMTFVSLLSACSR 425
Query: 608 SGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAW 667
+G V+ G+ +F +M++ +GIEP ++HY+C+VD+LGR+G VE AY+ IK MP + W
Sbjct: 426 AGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQ-PTISVW 484
Query: 668 SSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEM 727
+L AC++H ++G +AA+ L L+P + ++VLLSN +++AG W +A +R+++K +
Sbjct: 485 GALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGV 544
Query: 728 GVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDV 787
G++K G SWI +++VH F A D SH +KE+ L L M GY PD L+D+
Sbjct: 545 GIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDL 604
Query: 788 DDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIIL 847
++EEK + HSE+LA+AFGLL+ P IR+TKNLR+C DCH KF+S V REII+
Sbjct: 605 EEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIV 664
Query: 848 RDVRRFHHFRNGTCSCGDYW 867
RD RFH F++G CSC DYW
Sbjct: 665 RDNNRFHRFKDGICSCKDYW 684
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 140/512 (27%), Positives = 227/512 (44%), Gaps = 27/512 (5%)
Query: 73 AFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDR 132
A +LK A + + LG+ +H + K + +AN L+NMY K A V
Sbjct: 8 ALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRL 67
Query: 133 ISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSL 192
R+ VSW S+I+ + V P FT A ++LR ++
Sbjct: 68 TPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVT- 126
Query: 193 GKQVHAYTFRNGD-WRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQ 251
GKQ+HA + G F + MY K D+A+ LF +++L +WN IS+
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 186
Query: 252 NDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSF 311
+ R EA+ + P+ +T + L ACS L G ++HG LR+ D S
Sbjct: 187 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVS- 245
Query: 312 VGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFI----EM 367
V + L+D Y CK+ +F + + W +++A Y +N D++A L++ ++
Sbjct: 246 VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDI 305
Query: 368 VYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGR 427
V SDF +SS+L AC IH + VK E+ +V +AL+DMY + G
Sbjct: 306 VETSDF-----MISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGC 360
Query: 428 IEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDM-QRGQDDEYEDDESIPLK 486
IE S+ F M +++V+ N++I GY G+ D AL L +M RG
Sbjct: 361 IEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP----------T 410
Query: 487 PNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVG--SALIDMYAKCGCLNLSR 544
PN +T +++L C +I +++ + S ++DM + G + +
Sbjct: 411 PNYMTFVSLLSACSRAGAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAY 469
Query: 545 IVFDQMPTRNVIT-WNVLIMAYGMHGKGEEAL 575
+MP + I+ W L A MHGK + L
Sbjct: 470 EFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501
Score = 157 bits (396), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 187/422 (44%), Gaps = 11/422 (2%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+ +W + AQ+ F A+ + M GV P++F FP KA A + GKQI
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
H K G V V S +MY K A +FD I +R+ +WN+ I+ +
Sbjct: 131 HALAVKCGRI-LDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 189
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNN 212
+ P S T + +ACS+ L+LG Q+H R+G D N
Sbjct: 190 PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLH-LNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 213 ALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRP 272
L+ Y K +I ++ +F K+ VSW +++++ QN E+A + + V
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET 308
Query: 273 DGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWV 332
++S L AC+ + L G+ IH +A++ + FVGSALVDMY C +
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKAC-VERTIFVGSALVDMYGKCGCIEDSEQA 367
Query: 333 FDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYES-DFTPNSTTLSSLLPACVRCK 391
FD + + + N++I GYA D A+ LF EM TPN T SLL AC R
Sbjct: 368 FDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAG 427
Query: 392 AFLDKEGIHGYVVKR---GFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVS-WN 447
A + G+ + R G E + ++DM R G +E + M + +S W
Sbjct: 428 AV--ENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWG 485
Query: 448 TM 449
+
Sbjct: 486 AL 487
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 484 bits (1245), Expect = e-136, Method: Compositional matrix adjust.
Identities = 261/675 (38%), Positives = 398/675 (58%), Gaps = 22/675 (3%)
Query: 194 KQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQND 253
K + A+ ++G + + LV K G ID A+ +F ++ +V+WN++I+ L ++
Sbjct: 85 KTIQAHMLKSGFPAEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHR 144
Query: 254 RFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVG 313
R +EA+ M+ + V PD TL+S A S L + + + HG A+ + N FVG
Sbjct: 145 RSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVG 204
Query: 314 SALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDF 373
SALVDMY K + + V D + + V + A+I GY++ D EA+K F M+ E
Sbjct: 205 SALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEK-V 263
Query: 374 TPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKS 433
PN T +S+L +C K + + IHG +VK GFE Q +L+ MY R ++ S
Sbjct: 264 QPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLR 323
Query: 434 IFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLM 493
+F ++ + VSW ++I+G V GR + AL M R +KPNS TL
Sbjct: 324 VFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRD-----------SIKPNSFTLS 372
Query: 494 TVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR 553
+ L GC +IH K D GS LID+Y KCGC +++R+VFD +
Sbjct: 373 SALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEV 432
Query: 554 NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDE 613
+VI+ N +I +Y +G G EAL+LF RM+ N ++PN+VT +++ AC++S +V+E
Sbjct: 433 DVISLNTMIYSYAQNGFGREALDLFERMI-----NLGLQPNDVTVLSVLLACNNSRLVEE 487
Query: 614 GLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGA 673
G LF + + + I ++DHYAC+VDLLGR+GR+EEA +++ T N V W +LL A
Sbjct: 488 GCELFDSFRKDK-IMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLV-LWRTLLSA 544
Query: 674 CKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEP 733
CK+H+ +E+ E +++L +EP +L+SN+Y+S G W++ ++++ KMK+M ++K P
Sbjct: 545 CKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNP 604
Query: 734 GCSWIEHRDEVHKFLAGDA-SHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEK 792
SW+E E H F+AGD SHP S+++ E LE L+++ + GYV D SCV D+++ K
Sbjct: 605 AMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAK 664
Query: 793 ETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRR 852
E L HSE+LAIAF + G +IR+ KNLRVC DCH K +S+++ REII RD +R
Sbjct: 665 ERSLHQHSEKLAIAFAVWRNVGG-SIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKR 723
Query: 853 FHHFRNGTCSCGDYW 867
FHHFR+G+CSCGDYW
Sbjct: 724 FHHFRDGSCSCGDYW 738
Score = 186 bits (473), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 201/408 (49%), Gaps = 20/408 (4%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI---HGHVFKFGYASTSVAVA 110
+A+ Y M+ V PD + +V KA +DL+L K+ HG G ++V V
Sbjct: 148 EAVEMYRLMITNNVLPDEYTLSSVFKA---FSDLSLEKEAQRSHGLAVILGLEVSNVFVG 204
Query: 111 NSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD 170
++LV+MY K G A V DR+ ++D V ++I + V
Sbjct: 205 SALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQ 264
Query: 171 PTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKA 229
P +T S+ +C NL+D + GK +H ++G + + +L+TMY + +D++
Sbjct: 265 PNEYTYASVLISCGNLKD-IGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLR 323
Query: 230 LFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEM 289
+F + + VSW ++IS L QN R E AL+ M++ ++P+ TL+SAL CS+L M
Sbjct: 324 VFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAM 383
Query: 290 LRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIA 349
G++IHG + + + GS L+D+Y C +D R VFD + V N MI
Sbjct: 384 FEEGRQIHGIVTK-YGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIY 442
Query: 350 GYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFE 409
YA+N F EA+ LF M+ PN T+ S+L AC + L +EG + F
Sbjct: 443 SYAQNGFGREALDLFERMI-NLGLQPNDVTVLSVLLACNNSR--LVEEGCELF---DSFR 496
Query: 410 KDKYVQN-----ALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITG 452
KDK + ++D+ R GR+E ++ + + D+V W T+++
Sbjct: 497 KDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSA 544
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 13/227 (5%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W + Q+ A+ + M+ + P++F + L+ + + G+QIHG V
Sbjct: 335 SWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIV 394
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
K+G+ A + L+++YGKCG A VFD +S+ D +S N+MI + +
Sbjct: 395 TKYGFDRDKYA-GSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREA 453
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACSNLR---DGLSLGKQVHAYTFRNGDWRTFTNN-- 212
+ P T++S+ AC+N R +G L +FR D TN+
Sbjct: 454 LDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFD-----SFRK-DKIMLTNDHY 507
Query: 213 -ALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEA 258
+V + + GR++EA+ L + DLV W T++S+ + + E A
Sbjct: 508 ACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMA 554
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 482 bits (1240), Expect = e-136, Method: Compositional matrix adjust.
Identities = 244/635 (38%), Positives = 381/635 (60%), Gaps = 31/635 (4%)
Query: 240 VSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGY 299
+S N +I SL + + ++A+ +L P T + C H L +H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAI----RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 300 ALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDE 359
L N D F+ + L+ MY + D R VFD +RT+ VWNA+ +E
Sbjct: 103 ILDNGSDQD-PFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEE 161
Query: 360 AIKLFIEM---VYESDFTPNSTTLSSLLPACVRCKA----FLDKEGIHGYVVKRGFEKDK 412
+ L+ +M ESD T + +L ACV + + + IH ++ +RG+
Sbjct: 162 VLGLYWKMNRIGVESD----RFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHV 217
Query: 413 YVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRG 472
Y+ L+DMY+R G ++ + +FG M R++VSW+ MI Y G+ +AL +M R
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE 277
Query: 473 QDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALID 532
D PNSVT+++VL C IH Y L++ L + + V SAL+
Sbjct: 278 TKDS---------SPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVT 328
Query: 533 MYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIR 592
MY +CG L + + VFD+M R+V++WN LI +YG+HG G++A+++F M+A S
Sbjct: 329 MYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGAS----- 383
Query: 593 PNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYK 652
P VT++++ ACSH G+V+EG LF TM +HGI+P +HYAC+VDLLGR+ R++EA K
Sbjct: 384 PTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAK 443
Query: 653 LIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAG 712
+++ M + W SLLG+C+IH N+E+ E A+++L LEP A +YVLL++IY+ A
Sbjct: 444 MVQDMRTE-PGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQ 502
Query: 713 LWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMR 772
+WD+ ++K ++ G++K PG W+E R +++ F++ D +P +++H +L L + M+
Sbjct: 503 MWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMK 562
Query: 773 KEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHV 832
++GY+P T VL++++ EEKE ++ GHSE+LA+AFGL+NT G IR+TKNLR+C DCH+
Sbjct: 563 EKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHL 622
Query: 833 ATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
TKFISK +++EI++RDV RFH F+NG CSCGDYW
Sbjct: 623 FTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 192/414 (46%), Gaps = 20/414 (4%)
Query: 183 CSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVS 241
C R LS +VH + NG D F L+ MY+ LG +D A+ +F + +
Sbjct: 86 CCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYV 145
Query: 242 WNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEM----LRTGKEIH 297
WN + +L+ EE L + M + GV D T L AC E L GKEIH
Sbjct: 146 WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIH 205
Query: 298 GYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFD 357
+ R + ++ + LVDMY D +VF G+ R V W+AMIA YA+N
Sbjct: 206 AHLTRR-GYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKA 264
Query: 358 DEAIKLFIEMVYES-DFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQN 416
EA++ F EM+ E+ D +PNS T+ S+L AC A + IHGY+++RG + V +
Sbjct: 265 FEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVIS 324
Query: 417 ALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDE 476
AL+ MY R G++E+ + +F M RD+VSWN++I+ Y V G A+ + +M
Sbjct: 325 ALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGAS- 383
Query: 477 YEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALK-QKLATDIAVGSALIDMYA 535
P VT ++VL C + + + I + ++D+
Sbjct: 384 ----------PTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLG 433
Query: 536 KCGCLN-LSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSN 588
+ L+ +++V D W L+ + +HG E A RR+ A + N
Sbjct: 434 RANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKN 487
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 153/326 (46%), Gaps = 11/326 (3%)
Query: 69 PDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHH 128
P + ++ + L+ ++H H+ G + +A L+ MY G + A
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNG-SDQDPFLATKLIGMYSDLGSVDYARK 133
Query: 129 VFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLR- 187
VFD+ R WN++ A V+ FT + AC
Sbjct: 134 VFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASEC 193
Query: 188 --DGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNT 244
+ L GK++HA+ R G + LV MYA+ G +D A +FG +++VSW+
Sbjct: 194 TVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSA 253
Query: 245 VISSLSQNDRFEEALLFLYHMLQSG--VRPDGVTLASALPACSHLEMLRTGKEIHGYALR 302
+I+ ++N + EAL M++ P+ VT+ S L AC+ L L GK IHGY LR
Sbjct: 254 MIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR 313
Query: 303 NTDLIDNSF-VGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAI 361
+D+ V SALV MY C K + G+ VFD + R V WN++I+ Y + + +AI
Sbjct: 314 RG--LDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAI 371
Query: 362 KLFIEMVYESDFTPNSTTLSSLLPAC 387
++F EM+ + +P T S+L AC
Sbjct: 372 QIFEEML-ANGASPTPVTFVSVLGAC 396
Score = 136 bits (342), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 147/304 (48%), Gaps = 10/304 (3%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAG----VNDLNLGKQIHGHVFKFGYASTSVAV 109
+ + Y M GV D F + VLKA VN L GK+IH H+ + GY S+ V +
Sbjct: 161 EVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGY-SSHVYI 219
Query: 110 ANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNV 169
+LV+MY + G + A +VF + R+ VSW++MIA +
Sbjct: 220 MTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETK 279
Query: 170 D--PTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDE 226
D P S T+VS+ AC++L L GK +H Y R G D +ALVTMY + G+++
Sbjct: 280 DSSPNSVTMVSVLQACASL-AALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEV 338
Query: 227 AKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH 286
+ +F D+D+VSWN++ISS + ++A+ ML +G P VT S L ACSH
Sbjct: 339 GQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSH 398
Query: 287 LEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADK-GRWVFDGILRRTVAVWN 345
++ GK + R+ + + +VD+ + D+ + V D VW
Sbjct: 399 EGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWG 458
Query: 346 AMIA 349
+++
Sbjct: 459 SLLG 462
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 476 bits (1226), Expect = e-134, Method: Compositional matrix adjust.
Identities = 243/623 (39%), Positives = 368/623 (59%), Gaps = 22/623 (3%)
Query: 246 ISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTD 305
IS L N R +EALL M G + L AC LR G+ +H + ++ T
Sbjct: 27 ISQLCSNGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIK-TR 82
Query: 306 LIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFI 365
+ +++ + L+ Y C + R V D + + V W AMI+ Y++ EA+ +F
Sbjct: 83 YLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFA 142
Query: 366 EMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRM 425
EM+ SD PN T +++L +C+R + IHG +VK ++ +V ++L+DMY++
Sbjct: 143 EMM-RSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKA 201
Query: 426 GRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPL 485
G+I+ ++ IF + RD+VS +I GY G ++AL + H + S +
Sbjct: 202 GQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLH-----------SEGM 250
Query: 486 KPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRI 545
PN VT ++L + H + L+++L + ++LIDMY+KCG L+ +R
Sbjct: 251 SPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARR 310
Query: 546 VFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAAC 605
+FD MP R I+WN +++ Y HG G E LELFR M EK ++P+ VT +A+ + C
Sbjct: 311 LFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEK----RVKPDAVTLLAVLSGC 366
Query: 606 SHSGMVDEGLNLFHTMKAN-HGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKV 664
SH M D GLN+F M A +G +P ++HY C+VD+LGR+GR++EA++ IK MPS
Sbjct: 367 SHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK-PTA 425
Query: 665 DAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKM 724
SLLGAC++H ++++GE ++L+ +EP A +YV+LSN+Y+SAG W ++R M
Sbjct: 426 GVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMM 485
Query: 725 KEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVL 784
+ V KEPG SWI+H +H F A D +HP+ +E+ ++ + +M++ GYVPD SCVL
Sbjct: 486 MQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVL 545
Query: 785 HDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDRE 844
+DVD+E+KE ML GHSE+LA+ FGL+ T G IRV KNLR+C DCH K SK+ +RE
Sbjct: 546 YDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFERE 605
Query: 845 IILRDVRRFHHFRNGTCSCGDYW 867
+ LRD RFH +G CSCGDYW
Sbjct: 606 VSLRDKNRFHQIVDGICSCGDYW 628
Score = 166 bits (419), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 173/364 (47%), Gaps = 14/364 (3%)
Query: 73 AFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDR 132
+ A+L A L G+++H H+ K Y + + L+ YGKC L A V D
Sbjct: 54 GYDALLNACLDKRALRDGQRVHAHMIKTRYLPATY-LRTRLLIFYGKCDCLEDARKVLDE 112
Query: 133 ISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSL 192
+ +++ VSW +MI+ + + P FT ++ +C GL L
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRA-SGLGL 171
Query: 193 GKQVHAYTFR-NGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQ 251
GKQ+H + N D F ++L+ MYAK G+I EA+ +F ++D+VS +I+ +Q
Sbjct: 172 GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQ 231
Query: 252 NDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSF 311
EEAL + + G+ P+ VT AS L A S L +L GK+ H + LR +L +
Sbjct: 232 LGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRR-ELPFYAV 290
Query: 312 VGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYES 371
+ ++L+DMY C R +FD + RT WNAM+ GY+++ E ++LF M E
Sbjct: 291 LQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEK 350
Query: 372 DFTPNSTTLSSLLPACVRCKA------FLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRM 425
P++ TL ++L C + D Y K G E ++DM R
Sbjct: 351 RVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEH----YGCIVDMLGRA 406
Query: 426 GRIE 429
GRI+
Sbjct: 407 GRID 410
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 125/261 (47%), Gaps = 4/261 (1%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W + +Q+ +A++ +A M+ + P+ F F VL + + L LGKQIHG +
Sbjct: 120 SWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLI 179
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
K+ Y S + V +SL++MY K G + A +F+ + +RD VS ++IA +
Sbjct: 180 VKWNYDS-HIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEA 238
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVT 216
+ P T S+ A S L L GKQ H + R + N+L+
Sbjct: 239 LEMFHRLHSEGMSPNYVTYASLLTALSGLAL-LDHGKQAHCHVLRRELPFYAVLQNSLID 297
Query: 217 MYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEAL-LFLYHMLQSGVRPDGV 275
MY+K G + A+ LF ++ +SWN ++ S++ E L LF + V+PD V
Sbjct: 298 MYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAV 357
Query: 276 TLASALPACSHLEMLRTGKEI 296
TL + L CSH M TG I
Sbjct: 358 TLLAVLSGCSHGRMEDTGLNI 378
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 474 bits (1219), Expect = e-133, Method: Compositional matrix adjust.
Identities = 262/717 (36%), Positives = 405/717 (56%), Gaps = 38/717 (5%)
Query: 177 VSIAHACSNLRDGLSLGKQVHAYTFRNGDWR-TFTNNALVTMYA--KLGRIDEAKALFGL 233
+S+ C +LR KQ H + R G + ++ + L M A ++ A+ +F
Sbjct: 34 ISLIERCVSLRQL----KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDE 89
Query: 234 FDDKDLVSWNTVISSL-SQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRT 292
+ +WNT+I + S D FL + +S P+ T + A + + L
Sbjct: 90 IPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149
Query: 293 GKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYA 352
G+ +HG A+++ + + FV ++L+ Y +C D VF I + V WN+MI G+
Sbjct: 150 GQSLHGMAVKSA-VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFV 208
Query: 353 RNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDK 412
+ D+A++LF +M E D + T+ +L AC + + + Y+ + +
Sbjct: 209 QKGSPDKALELFKKMESE-DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNL 267
Query: 413 YVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDM--- 469
+ NA++DMY++ G IE +K +F +M+ +D V+W TM+ GY + ++ A +L+ M
Sbjct: 268 TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK 327
Query: 470 -------------QRGQDDE-----YEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEI 511
Q G+ +E +E +K N +TL++ L C I
Sbjct: 328 DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWI 387
Query: 512 HAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKG 571
H+Y K + + V SALI MY+KCG L SR VF+ + R+V W+ +I MHG G
Sbjct: 388 HSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCG 447
Query: 572 EEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSS 631
EA+++F +M +++N ++PN VT+ +F ACSH+G+VDE +LFH M++N+GI P
Sbjct: 448 NEAVDMFYKM---QEAN--VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEE 502
Query: 632 DHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLL 691
HYAC+VD+LGRSG +E+A K I+ MP W +LLGACKIH NL + E+A +LL
Sbjct: 503 KHYACIVDVLGRSGYLEKAVKFIEAMPIP-PSTSVWGALLGACKIHANLNLAEMACTRLL 561
Query: 692 VLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGD 751
LEP +VLLSNIY+ G W+ ++RK M+ G++KEPGCS IE +H+FL+GD
Sbjct: 562 ELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGD 621
Query: 752 ASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEE-KETMLCGHSERLAIAFGLL 810
+HP S++++ L ++++++ GY P+ S VL +++EE KE L HSE+LAI +GL+
Sbjct: 622 NAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLI 681
Query: 811 NTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
+T IRV KNLRVC DCH K IS++ DREII+RD RFHHFRNG CSC D+W
Sbjct: 682 STEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 212/436 (48%), Gaps = 39/436 (8%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVA-AGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGH 96
AW +R A + +I + +MV+ + P+ + FP ++KAAA V+ L+LG+ +HG
Sbjct: 97 AWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGM 156
Query: 97 VFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXX 156
K S V VANSL++ Y CGDL A VF I ++D VSWNSMI +
Sbjct: 157 AVKSAVGS-DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDK 215
Query: 157 XXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFT-NNALV 215
+V + T+V + AC+ +R+ L G+QV +Y N T NA++
Sbjct: 216 ALELFKKMESEDVKASHVTMVGVLSACAKIRN-LEFGRQVCSYIEENRVNVNLTLANAML 274
Query: 216 TMYAKLGRIDEAKALFGLFDD-------------------------------KDLVSWNT 244
MY K G I++AK LF ++ KD+V+WN
Sbjct: 275 DMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNA 334
Query: 245 VISSLSQNDRFEEALLFLYHM-LQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRN 303
+IS+ QN + EAL+ + + LQ ++ + +TL S L AC+ + L G+ IH Y ++
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY-IKK 393
Query: 304 TDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKL 363
+ N V SAL+ MY C +K R VF+ + +R V VW+AMI G A + +EA+ +
Sbjct: 394 HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDM 453
Query: 364 FIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGI-HGYVVKRGFEKDKYVQNALMDMY 422
F +M E++ PN T +++ AC + E + H G ++ ++D+
Sbjct: 454 FYKM-QEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512
Query: 423 SRMGRIEISKSIFGSM 438
R G +E + +M
Sbjct: 513 GRSGYLEKAVKFIEAM 528
Score = 169 bits (427), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 127/516 (24%), Positives = 218/516 (42%), Gaps = 51/516 (9%)
Query: 91 KQIHGHVFKFGYASTSVAVANSLVNM--YGKCGDLAGAHHVFDRISDRDHVSWNSMIAA- 147
KQ HGH+ + G S + A+ L M L A VFD I + +WN++I A
Sbjct: 47 KQTHGHMIRTGTFSDPYS-ASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAY 105
Query: 148 ACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DW 206
A P +T + A + + LSLG+ +H ++
Sbjct: 106 ASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEV-SSLSLGQSLHGMAVKSAVGS 164
Query: 207 RTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHML 266
F N+L+ Y G +D A +F +KD+VSWN++I+ Q ++AL M
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 267 QSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKA 326
V+ VT+ L AC+ + L G+++ Y N + N + +A++DMY C
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNV-NLTLANAMLDMYTKCGSI 283
Query: 327 DKGRWVFDG-------------------------------ILRRTVAVWNAMIAGYARNE 355
+ + +FD + ++ + WNA+I+ Y +N
Sbjct: 284 EDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNG 343
Query: 356 FDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQ 415
+EA+ +F E+ + + N TL S L AC + A IH Y+ K G + +V
Sbjct: 344 KPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVT 403
Query: 416 NALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDD 475
+AL+ MYS+ G +E S+ +F S+++RD+ W+ MI G + G ++A+++ + MQ
Sbjct: 404 SALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN-- 461
Query: 476 EYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEI-HAYALKQKLATDIAVGSALIDMY 534
+KPN VT V C + H + + + ++D+
Sbjct: 462 ---------VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512
Query: 535 AKCGCLNLSRIVFDQMPT-RNVITWNVLIMAYGMHG 569
+ G L + + MP + W L+ A +H
Sbjct: 513 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHA 548
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 473 bits (1217), Expect = e-133, Method: Compositional matrix adjust.
Identities = 257/722 (35%), Positives = 403/722 (55%), Gaps = 32/722 (4%)
Query: 169 VDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDEA 227
+ P +T AC+ R G Q+H + G + F N+LV YA+ G +D A
Sbjct: 130 ISPDKYTFPFGLSACAKSR-AKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSA 188
Query: 228 KALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQ-SGVRPDGVTLASALPACSH 286
+ +F ++++VSW ++I ++ D ++A+ + M++ V P+ VT+ + AC+
Sbjct: 189 RKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAK 248
Query: 287 LEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNA 346
LE L TG++++ + +RN+ + N + SALVDMY C D + +FD + + NA
Sbjct: 249 LEDLETGEKVYAF-IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNA 307
Query: 347 MIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKR 406
M + Y R EA+ +F ++ +S P+ ++ S + +C + + L + HGYV++
Sbjct: 308 MASNYVRQGLTREALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN 366
Query: 407 GFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLL 466
GFE + NAL+DMY + R + + IF M + +V+WN+++ GYV G D A
Sbjct: 367 GFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETF 426
Query: 467 HDMQRG-------------QDDEYEDDESI--------PLKPNSVTLMTVLPGCXXXXXX 505
M Q +E+ + + + VT+M++ C
Sbjct: 427 ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL 486
Query: 506 XXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAY 565
I+ Y K + D+ +G+ L+DM+++CG + +F+ + R+V W I A
Sbjct: 487 DLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAM 546
Query: 566 GMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANH 625
M G E A+ELF M+ + ++P+ V ++ ACSH G+V +G +F++M H
Sbjct: 547 AMAGNAERAIELFDDMIEQG-----LKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH 601
Query: 626 GIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEI 685
G+ P HY C+VDLLGR+G +EEA +LI+ MP V W+SLL AC++ N+E+
Sbjct: 602 GVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV-IWNSLLAACRVQGNVEMAAY 660
Query: 686 AAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVH 745
AA+++ VL P YVLLSN+Y+SAG W+ +R MKE G+RK PG S I+ R + H
Sbjct: 661 AAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTH 720
Query: 746 KFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAI 805
+F +GD SHP+ + L+ + QR G+VPD S VL DVD++EK ML HSE+LA+
Sbjct: 721 EFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAM 780
Query: 806 AFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGD 865
A+GL+++ GTTIR+ KNLRVC+DCH KF SK+ +REIILRD RFH+ R G CSCGD
Sbjct: 781 AYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGD 840
Query: 866 YW 867
+W
Sbjct: 841 FW 842
Score = 236 bits (602), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 180/570 (31%), Positives = 265/570 (46%), Gaps = 55/570 (9%)
Query: 43 LRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGY 102
+R A S +AI + M+ +G+ PD + FP L A A G QIHG + K GY
Sbjct: 106 IRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGY 165
Query: 103 ASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAA-ACRFXXXXXXXXXX 161
A + V NSLV+ Y +CG+L A VFD +S+R+ VSW SMI A R
Sbjct: 166 AK-DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 162 XXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAK 220
V P S T+V + AC+ L D L G++V+A+ +G + +ALV MY K
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLED-LETGEKVYAFIRNSGIEVNDLMVSALVDMYMK 283
Query: 221 LGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASA 280
ID AK LF + +L N + S+ + EAL M+ SGVRPD +++ SA
Sbjct: 284 CNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSA 343
Query: 281 LPACSHLEMLRTGKEIHGYALRNT-DLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRR 339
+ +CS L + GK HGY LRN + DN + +AL+DMY C + D +FD + +
Sbjct: 344 ISSCSQLRNILWGKSCHGYVLRNGFESWDN--ICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 340 TVAVWNAMIAGYARN-EFD------------------------------DEAIKLFIEMV 368
TV WN+++AGY N E D +EAI++F M
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 369 YESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI 428
+ + T+ S+ AC A + I+ Y+ K G + D + L+DM+SR G
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 429 EISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKP 487
E + SIF S+ RD+ +W I + G + A+ L DM ++G LKP
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQG------------LKP 569
Query: 488 NSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLAT--DIAVGSALIDMYAKCGCLNLSRI 545
+ V + L C EI LK + D+ G ++D+ + G L +
Sbjct: 570 DGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG-CMVDLLGRAGLLEEAVQ 628
Query: 546 VFDQMPTR-NVITWNVLIMAYGMHGKGEEA 574
+ + MP N + WN L+ A + G E A
Sbjct: 629 LIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
Score = 189 bits (480), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 212/455 (46%), Gaps = 44/455 (9%)
Query: 242 WNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYAL 301
+N++I + + EA+L M+ SG+ PD T L AC+ G +IHG +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 302 RNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAI 361
+ + FV ++LV Y C + D R VFD + R V W +MI GYAR +F +A+
Sbjct: 162 K-MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 362 KLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDM 421
LF MV + + TPNS T+ ++ AC + + E ++ ++ G E + + +AL+DM
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 422 YSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDE 481
Y + I+++K +F ++ N M + YV G +AL + + M
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS--------- 331
Query: 482 SIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLN 541
++P+ +++++ + C H Y L+ + + +ALIDMY KC +
Sbjct: 332 --GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 542 LSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKD--------------- 586
+ +FD+M + V+TWN ++ Y +G+ + A E F M EK+
Sbjct: 390 TAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM-PEKNIVSWNTIISGLVQGS 448
Query: 587 -------------SNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDH 633
S + + + VT ++I +AC H G +D +++ ++ N GI+
Sbjct: 449 LFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDVRL 507
Query: 634 YACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWS 668
LVD+ R G E A + ++ + + V AW+
Sbjct: 508 GTTLVDMFSRCGDPESAMSIFNSLTN--RDVSAWT 540
Score = 152 bits (384), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 194/386 (50%), Gaps = 22/386 (5%)
Query: 340 TVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGI 399
T ++N++I GYA + +EAI LF+ M+ S +P+ T L AC + +A + I
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMM-NSGISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 400 HGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRH 459
HG +VK G+ KD +VQN+L+ Y+ G ++ ++ +F M R++VSW +MI GY
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 460 DDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQK 519
DA++L M R ++ + PNSVT++ V+ C +++A+
Sbjct: 217 KDAVDLFFRMVRDEE----------VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG 266
Query: 520 LATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFR 579
+ + + SAL+DMY KC +++++ +FD+ N+ N + Y G EAL +F
Sbjct: 267 IEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFN 326
Query: 580 RMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVD 639
M+ + +RP+ ++ ++ ++CS + G + H +G E + L+D
Sbjct: 327 LMM-----DSGVRPDRISMLSAISSCSQLRNILWGKSC-HGYVLRNGFESWDNICNALID 380
Query: 640 LLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVAS 699
+ + R + A+++ M + K V W+S++ +N EV + E N+ S
Sbjct: 381 MYMKCHRQDTAFRIFDRMSN--KTVVTWNSIVAG--YVENGEVDAAWETFETMPEKNIVS 436
Query: 700 HYVLLSNIYSSAGLWDQAMDIRKKMK 725
++S + + L+++A+++ M+
Sbjct: 437 WNTIISGLVQGS-LFEEAIEVFCSMQ 461
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 472 bits (1214), Expect = e-133, Method: Compositional matrix adjust.
Identities = 258/660 (39%), Positives = 382/660 (57%), Gaps = 59/660 (8%)
Query: 214 LVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPD 273
L+ YA L + A+ +F +++++ N +I S N + E + M VRPD
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 274 GVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVF 333
T L ACS + G++IHG A + L FVG+ LV MY C + R V
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATK-VGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 334 DGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYES-DFTPNSTTLSSLLPACVRCKA 392
D + RR V WN+++ GYA+N+ D+A+++ EM ES + ++ T++SLLPA
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM--ESVKISHDAGTMASLLPA------ 250
Query: 393 FLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITG 452
V E YV+ DM+ +MG ++ +VSWN MI
Sbjct: 251 ----------VSNTTTENVMYVK----DMFFKMG-------------KKSLVSWNVMIGV 283
Query: 453 YVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIH 512
Y+ +A+ L Y E+ +P++V++ +VLP C +IH
Sbjct: 284 YMKNAMPVEAVEL-----------YSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIH 332
Query: 513 AYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGE 572
Y ++KL ++ + +ALIDMYAKCGCL +R VF+ M +R+V++W +I AYG G+G
Sbjct: 333 GYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGC 392
Query: 573 EALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSD 632
+A+ LF ++ +DS + P+ + ++ AACSH+G+++EG + F M ++ I P +
Sbjct: 393 DAVALFSKL---QDSG--LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLE 447
Query: 633 HYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLV 692
H AC+VDLLGR+G+V+EAY+ I+ M S W +LLGAC++H + ++G +AA +L
Sbjct: 448 HLACMVDLLGRAGKVKEAYRFIQDM-SMEPNERVWGALLGACRVHSDTDIGLLAADKLFQ 506
Query: 693 LEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDA 752
L P + +YVLLSNIY+ AG W++ +IR MK G++K PG S +E +H FL GD
Sbjct: 507 LAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDR 566
Query: 753 SHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNT 812
SHPQS E++ L+ L+++M++ GYVPD+ LHDV++E+KET L HSE+LAI F L+NT
Sbjct: 567 SHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNT 626
Query: 813 P-----PGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
TIR+TKNLR+C DCHVA K IS+I REII+RD RFH FR G CSCGDYW
Sbjct: 627 KEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 159/347 (45%), Gaps = 40/347 (11%)
Query: 43 LRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGY 102
+R + + + + + M V PD++ FP VLKA + + +G++IHG K G
Sbjct: 112 IRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGL 171
Query: 103 ASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXX 162
+ST + V N LV+MYGKCG L+ A V D +S RD VSWNS++ +
Sbjct: 172 SST-LFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCR 230
Query: 163 XXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVT--MYAK 220
+ + T+ S+ A SN T T N + M+ K
Sbjct: 231 EMESVKISHDAGTMASLLPAVSN----------------------TTTENVMYVKDMFFK 268
Query: 221 LGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASA 280
+G+ K LVSWN +I +N EA+ M G PD V++ S
Sbjct: 269 MGK-------------KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSV 315
Query: 281 LPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRT 340
LPAC L GK+IHGY R LI N + +AL+DMY C +K R VF+ + R
Sbjct: 316 LPACGDTSALSLGKKIHGYIERK-KLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRD 374
Query: 341 VAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
V W AMI+ Y + +A+ LF ++ +S P+S + L AC
Sbjct: 375 VVSWTAMISAYGFSGRGCDAVALFSKL-QDSGLVPDSIAFVTTLAAC 420
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 171/384 (44%), Gaps = 54/384 (14%)
Query: 290 LRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIA 349
+RT + +H + DL NS +G L+ Y + K R VFD I R V + N MI
Sbjct: 55 IRTLRTVHSRIILE-DLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 350 GYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFE 409
Y N F E +K+F M + P+ T +L AC + IHG K G
Sbjct: 114 SYVNNGFYGEGVKVFGTMC-GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 172
Query: 410 KDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDM 469
+V N L+ MY + G + ++ + M RRD+VSWN+++ GY R DDAL + +M
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM 232
Query: 470 QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSA 529
ES+ + ++ T+ ++LP A+ ++
Sbjct: 233 -----------ESVKISHDAGTMASLLP-----------------AVSNTTTENV----- 259
Query: 530 LIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNK 589
MY K +F +M +++++WNV+I Y + EA+EL+ RM A+
Sbjct: 260 ---MYVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADG---- 304
Query: 590 EIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEE 649
P+ V+ ++ AC + + G + H + P+ L+D+ + G +E+
Sbjct: 305 -FEPDAVSITSVLPACGDTSALSLGKKI-HGYIERKKLIPNLLLENALIDMYAKCGCLEK 362
Query: 650 AYKLIKTMPSNMKKVDAWSSLLGA 673
A + + M S + V +W++++ A
Sbjct: 363 ARDVFENMKS--RDVVSWTAMISA 384
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 157/338 (46%), Gaps = 30/338 (8%)
Query: 399 IHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGR 458
+H ++ + + LM Y+ + + ++ +F + R+++ N MI YV G
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 459 HDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQ 518
+ + + + M ++P+ T VL C +IH A K
Sbjct: 121 YGEGVKVFGTMC-----------GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKV 169
Query: 519 KLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELF 578
L++ + VG+ L+ MY KCG L+ +R+V D+M R+V++WN L++ Y + + ++ALE+
Sbjct: 170 GLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVC 229
Query: 579 RRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLV 638
R M + K S+ + T ++ A S++ E + M G + S + ++
Sbjct: 230 REMESVKISH-----DAGTMASLLPAVSNT--TTENVMYVKDMFFKMG-KKSLVSWNVMI 281
Query: 639 DLLGRSGRVEEAYKLIKTMPSNMKKVDAWS--SLLGACKIHQNLEVGE-----IAAKQLL 691
+ ++ EA +L M ++ + DA S S+L AC L +G+ I K+L+
Sbjct: 282 GVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI 341
Query: 692 VLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGV 729
PN+ L+ ++Y+ G ++A D+ + MK V
Sbjct: 342 ---PNLLLENALI-DMYAKCGCLEKARDVFENMKSRDV 375
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 3/224 (1%)
Query: 129 VFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRD 188
+F ++ + VSWN MI + +P + ++ S+ AC +
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD-TS 323
Query: 189 GLSLGKQVHAYTFRNGDW-RTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVIS 247
LSLGK++H Y R NAL+ MYAK G +++A+ +F +D+VSW +IS
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 248 SLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLI 307
+ + R +A+ + SG+ PD + + L ACSH +L G+ + +
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 308 DNSFVGSALVDMYCNCKKADKG-RWVFDGILRRTVAVWNAMIAG 350
+ +VD+ K + R++ D + VW A++
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
+S +W + + +++ ++A+ Y+ M A G PD + +VL A + L+LGK+I
Sbjct: 272 KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKI 331
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
HG++ + ++ + N+L++MY KCG L A VF+ + RD VSW +MI+A
Sbjct: 332 HGYIERKKLIP-NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGR 390
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSN 185
+ P S V+ ACS+
Sbjct: 391 GCDAVALFSKLQDSGLVPDSIAFVTTLAACSH 422
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 471 bits (1213), Expect = e-133, Method: Compositional matrix adjust.
Identities = 264/765 (34%), Positives = 416/765 (54%), Gaps = 25/765 (3%)
Query: 103 ASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAA-ACRFXXXXXXXXXX 161
+S V + N+ + M+ + G+L A +VF ++S+R+ SWN ++ A +
Sbjct: 125 SSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYH 184
Query: 162 XXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAK 220
V P +T + C + D L+ GK+VH + R G + NAL+TMY K
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPD-LARGKEVHVHVVRYGYELDIDVVNALITMYVK 243
Query: 221 LGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASA 280
G + A+ LF +D++SWN +IS +N E L + M V PD +TL S
Sbjct: 244 CGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSV 303
Query: 281 LPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRT 340
+ AC L R G++IH Y + +D S V ++L MY N + +F + R+
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDIS-VCNSLTQMYLNAGSWREAEKLFSRMERKD 362
Query: 341 VAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIH 400
+ W MI+GY N D+AI + M+ + P+ T++++L AC +H
Sbjct: 363 IVSWTTMISGYEYNFLPDKAIDTY-RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELH 421
Query: 401 GYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHD 460
+K V N L++MYS+ I+ + IF ++ R++++SW ++I G + R
Sbjct: 422 KLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCF 481
Query: 461 DALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKL 520
+AL L M+ + L+PN++TL L C EIHA+ L+ +
Sbjct: 482 EALIFLRQMK------------MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGV 529
Query: 521 ATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRR 580
D + +AL+DMY +CG +N + F+ ++V +WN+L+ Y G+G +ELF R
Sbjct: 530 GLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDR 588
Query: 581 MVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDL 640
MV + +RP+E+T+I++ CS S MV +GL F M+ ++G+ P+ HYAC+VDL
Sbjct: 589 MVKSR-----VRPDEITFISLLCGCSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDL 642
Query: 641 LGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASH 700
LGR+G ++EA+K I+ MP W +LL AC+IH +++GE++A+ + L+ +
Sbjct: 643 LGRAGELQEAHKFIQKMPVTPDPA-VWGALLNACRIHHKIDLGELSAQHIFELDKKSVGY 701
Query: 701 YVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKEL 760
Y+LL N+Y+ G W + +R+ MKE G+ + GCSW+E + +VH FL+ D HPQ+KE+
Sbjct: 702 YILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEI 761
Query: 761 HEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRV 820
+ LE ++M + G + D + ++ + CGHSER AIAFGL+NT PG I V
Sbjct: 762 NTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWV 821
Query: 821 TKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGD 865
TKNL +C +CH KFISK V REI +RD FHHF++G CSCGD
Sbjct: 822 TKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 468 bits (1204), Expect = e-132, Method: Compositional matrix adjust.
Identities = 256/721 (35%), Positives = 402/721 (55%), Gaps = 32/721 (4%)
Query: 169 VDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDEA 227
+ P +T AC+ R G Q+H + G + F N+LV YA+ G +D A
Sbjct: 130 ISPDKYTFPFGLSACAKSR-AKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSA 188
Query: 228 KALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQ-SGVRPDGVTLASALPACSH 286
+ +F ++++VSW ++I ++ D ++A+ + M++ V P+ VT+ + AC+
Sbjct: 189 RKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAK 248
Query: 287 LEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNA 346
LE L TG++++ + +RN+ + N + SALVDMY C D + +FD + + NA
Sbjct: 249 LEDLETGEKVYAF-IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNA 307
Query: 347 MIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKR 406
M + Y R EA+ +F ++ +S P+ ++ S + +C + + L + HGYV++
Sbjct: 308 MASNYVRQGLTREALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN 366
Query: 407 GFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLL 466
GFE + NAL+DMY + R + + IF M + +V+WN+++ GYV G D A
Sbjct: 367 GFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETF 426
Query: 467 HDMQRG-------------QDDEYEDDESI--------PLKPNSVTLMTVLPGCXXXXXX 505
M Q +E+ + + + VT+M++ C
Sbjct: 427 ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL 486
Query: 506 XXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAY 565
I+ Y K + D+ +G+ L+DM+++CG + +F+ + R+V W I A
Sbjct: 487 DLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAM 546
Query: 566 GMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANH 625
M G E A+ELF M+ + ++P+ V ++ ACSH G+V +G +F++M H
Sbjct: 547 AMAGNAERAIELFDDMIEQG-----LKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH 601
Query: 626 GIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEI 685
G+ P HY C+VDLLGR+G +EEA +LI+ MP V W+SLL AC++ N+E+
Sbjct: 602 GVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV-IWNSLLAACRVQGNVEMAAY 660
Query: 686 AAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVH 745
AA+++ VL P YVLLSN+Y+SAG W+ +R MKE G+RK PG S I+ R + H
Sbjct: 661 AAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTH 720
Query: 746 KFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAI 805
+F +GD SHP+ + L+ + QR G+VPD S VL DVD++EK ML HSE+LA+
Sbjct: 721 EFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAM 780
Query: 806 AFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGD 865
A+GL+++ GTTIR+ KNLRVC+DCH KF SK+ +REIILRD RFH+ R G CSCGD
Sbjct: 781 AYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGD 840
Query: 866 Y 866
+
Sbjct: 841 F 841
Score = 237 bits (604), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 180/570 (31%), Positives = 265/570 (46%), Gaps = 55/570 (9%)
Query: 43 LRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGY 102
+R A S +AI + M+ +G+ PD + FP L A A G QIHG + K GY
Sbjct: 106 IRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGY 165
Query: 103 ASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAA-ACRFXXXXXXXXXX 161
A + V NSLV+ Y +CG+L A VFD +S+R+ VSW SMI A R
Sbjct: 166 AK-DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 162 XXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAK 220
V P S T+V + AC+ L D L G++V+A+ +G + +ALV MY K
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLED-LETGEKVYAFIRNSGIEVNDLMVSALVDMYMK 283
Query: 221 LGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASA 280
ID AK LF + +L N + S+ + EAL M+ SGVRPD +++ SA
Sbjct: 284 CNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSA 343
Query: 281 LPACSHLEMLRTGKEIHGYALRNT-DLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRR 339
+ +CS L + GK HGY LRN + DN + +AL+DMY C + D +FD + +
Sbjct: 344 ISSCSQLRNILWGKSCHGYVLRNGFESWDN--ICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 340 TVAVWNAMIAGYARN-EFD------------------------------DEAIKLFIEMV 368
TV WN+++AGY N E D +EAI++F M
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 369 YESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI 428
+ + T+ S+ AC A + I+ Y+ K G + D + L+DM+SR G
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 429 EISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKP 487
E + SIF S+ RD+ +W I + G + A+ L DM ++G LKP
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQG------------LKP 569
Query: 488 NSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLAT--DIAVGSALIDMYAKCGCLNLSRI 545
+ V + L C EI LK + D+ G ++D+ + G L +
Sbjct: 570 DGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG-CMVDLLGRAGLLEEAVQ 628
Query: 546 VFDQMPTR-NVITWNVLIMAYGMHGKGEEA 574
+ + MP N + WN L+ A + G E A
Sbjct: 629 LIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
Score = 189 bits (481), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 213/455 (46%), Gaps = 44/455 (9%)
Query: 242 WNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYAL 301
+N++I + + EA+L M+ SG+ PD T L AC+ G +IHG +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 302 RNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAI 361
+ + FV ++LV Y C + D R VFD + R V W +MI GYAR +F +A+
Sbjct: 162 K-MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 362 KLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDM 421
LF MV + + TPNS T+ ++ AC + + E ++ ++ G E + + +AL+DM
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 422 YSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDE 481
Y + I+++K +F ++ N M + YV G +AL + + M D
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM---------DS 331
Query: 482 SIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLN 541
+ +P+ +++++ + C H Y L+ + + +ALIDMY KC +
Sbjct: 332 GV--RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 542 LSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKD--------------- 586
+ +FD+M + V+TWN ++ Y +G+ + A E F M EK+
Sbjct: 390 TAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM-PEKNIVSWNTIISGLVQGS 448
Query: 587 -------------SNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDH 633
S + + + VT ++I +AC H G +D +++ ++ N GI+
Sbjct: 449 LFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDVRL 507
Query: 634 YACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWS 668
LVD+ R G E A + ++ + + V AW+
Sbjct: 508 GTTLVDMFSRCGDPESAMSIFNSLTN--RDVSAWT 540
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 194/386 (50%), Gaps = 22/386 (5%)
Query: 340 TVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGI 399
T ++N++I GYA + +EAI LF+ M+ S +P+ T L AC + +A + I
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMM-NSGISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 400 HGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRH 459
HG +VK G+ KD +VQN+L+ Y+ G ++ ++ +F M R++VSW +MI GY
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 460 DDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQK 519
DA++L M R ++ + PNSVT++ V+ C +++A+
Sbjct: 217 KDAVDLFFRMVRDEE----------VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG 266
Query: 520 LATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFR 579
+ + + SAL+DMY KC +++++ +FD+ N+ N + Y G EAL +F
Sbjct: 267 IEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFN 326
Query: 580 RMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVD 639
M+ + +RP+ ++ ++ ++CS + G + H +G E + L+D
Sbjct: 327 LMM-----DSGVRPDRISMLSAISSCSQLRNILWGKSC-HGYVLRNGFESWDNICNALID 380
Query: 640 LLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVAS 699
+ + R + A+++ M + K V W+S++ +N EV + E N+ S
Sbjct: 381 MYMKCHRQDTAFRIFDRMSN--KTVVTWNSIVAG--YVENGEVDAAWETFETMPEKNIVS 436
Query: 700 HYVLLSNIYSSAGLWDQAMDIRKKMK 725
++S + + L+++A+++ M+
Sbjct: 437 WNTIISGLVQGS-LFEEAIEVFCSMQ 461
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 466 bits (1198), Expect = e-131, Method: Compositional matrix adjust.
Identities = 253/736 (34%), Positives = 404/736 (54%), Gaps = 27/736 (3%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
QA++ Y M+ GV PD FP ++KA + + + V G VA+SL
Sbjct: 121 QALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEF-VASSL 179
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
+ Y + G + +FDR+ +D V WN M+ + + P +
Sbjct: 180 IKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNA 239
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFG 232
T + C++ + + LG Q+H +G D+ N+L++MY+K GR D+A LF
Sbjct: 240 VTFDCVLSVCAS-KLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFR 298
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRT 292
+ D V+WN +IS Q+ EE+L F Y M+ SGV PD +T +S LP+ S E L
Sbjct: 299 MMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEY 358
Query: 293 GKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYA 352
K+IH Y +R++ +D F+ SAL+D Y C+ + +F V V+ AMI+GY
Sbjct: 359 CKQIHCYIMRHSISLD-IFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYL 417
Query: 353 RNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDK 412
N +++++F +V + +PN TL S+LP A +HG+++K+GF+
Sbjct: 418 HNGLYIDSLEMFRWLV-KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRC 476
Query: 413 YVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDD---ALNLLHDM 469
+ A++DMY++ GR+ ++ IF + +RDIVSWN+MIT C + D+ A+++ M
Sbjct: 477 NIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITR---CAQSDNPSAAIDIFRQM 533
Query: 470 QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSA 529
+ + V++ L C IH + +K LA+D+ S
Sbjct: 534 GVSG-----------ICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSEST 582
Query: 530 LIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNK 589
LIDMYAKCG L + VF M +N+++WN +I A G HGK +++L LF MV +
Sbjct: 583 LIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSG--- 639
Query: 590 EIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEE 649
IRP+++T++ I ++C H G VDEG+ F +M ++GI+P +HYAC+VDL GR+GR+ E
Sbjct: 640 -IRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTE 698
Query: 650 AYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYS 709
AY+ +K+MP W +LLGAC++H+N+E+ E+A+ +L+ L+P+ + +YVL+SN ++
Sbjct: 699 AYETVKSMPFP-PDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHA 757
Query: 710 SAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQ 769
+A W+ +R MKE V+K PG SWIE H F++GD +HP+S ++ L +LL
Sbjct: 758 NAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLG 817
Query: 770 RMRKEGYVPDTSCVLH 785
+R EGY+P LH
Sbjct: 818 ELRLEGYIPQPYLPLH 833
Score = 219 bits (558), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 146/507 (28%), Positives = 252/507 (49%), Gaps = 31/507 (6%)
Query: 179 IAHACSNLRDGLSLGKQVHAYTFRN---GDWRTFTNNALVTMYAKLGRIDEAKALFGLFD 235
+ ACSN + L GKQVHA+ N GD ++T+ ++ MYA G + +F D
Sbjct: 41 LLQACSN-PNLLRQGKQVHAFLIVNSISGD--SYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 236 DK--DLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTG 293
+ + WN++ISS +N +AL F + ML GV PD T + AC L+ + G
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-G 156
Query: 294 KEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYAR 353
+ + + + N FV S+L+ Y K D +FD +L++ +WN M+ GYA+
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 354 NEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLD-KEGIHGYVVKRGFEKDK 412
D IK F M + +PN+ T +L C K +D +HG VV G + +
Sbjct: 217 CGALDSVIKGFSVMRMD-QISPNAVTFDCVLSVCAS-KLLIDLGVQLHGLVVVSGVDFEG 274
Query: 413 YVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRG 472
++N+L+ MYS+ GR + + +F M R D V+WN MI+GYV G +++L ++M
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMI-- 332
Query: 473 QDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALID 532
S + P+++T ++LP +IH Y ++ ++ DI + SALID
Sbjct: 333 ---------SSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALID 383
Query: 533 MYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIR 592
Y KC +++++ +F Q + +V+ + +I Y +G ++LE+FR +V K I
Sbjct: 384 AYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK-----IS 438
Query: 593 PNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYK 652
PNE+T ++I + G L H G + + ++D+ + GR+ AY+
Sbjct: 439 PNEITLVSILPVIGILLALKLGREL-HGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497
Query: 653 LIKTMPSNMKKVDAWSSLLGACKIHQN 679
+ + + + + + +W+S++ C N
Sbjct: 498 IFERL--SKRDIVSWNSMITRCAQSDN 522
Score = 192 bits (487), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 222/466 (47%), Gaps = 23/466 (4%)
Query: 39 WIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVF 98
W L A+ + I ++ M + P+ F VL A ++LG Q+HG V
Sbjct: 207 WNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV 266
Query: 99 KFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXX 158
G ++ NSL++MY KCG A +F +S D V+WN MI+ +
Sbjct: 267 VSG-VDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESL 325
Query: 159 XXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTM 217
V P + T S+ + S + L KQ+H Y R+ F +AL+
Sbjct: 326 TFFYEMISSGVLPDAITFSSLLPSVSKF-ENLEYCKQIHCYIMRHSISLDIFLTSALIDA 384
Query: 218 YAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTL 277
Y K + A+ +F + D+V + +IS N + ++L +++ + P+ +TL
Sbjct: 385 YFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITL 444
Query: 278 ASALPACSHLEMLRTGKEIHGYALRNTDLIDNSF-VGSALVDMYCNCKKADKGRWVFDGI 336
S LP L L+ G+E+HG+ ++ DN +G A++DMY C + + +F+ +
Sbjct: 445 VSILPVIGILLALKLGRELHGFIIKKG--FDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
Query: 337 LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDK 396
+R + WN+MI A+++ AI +F +M S + ++S+ L AC +
Sbjct: 503 SKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGV-SGICYDCVSISAALSACANLPSESFG 561
Query: 397 EGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVC 456
+ IHG+++K D Y ++ L+DMY++ G ++ + ++F +M ++IVSWN++I C
Sbjct: 562 KAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAA---C 618
Query: 457 GRH---DDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
G H D+L L H+M E ++P+ +T + ++ C
Sbjct: 619 GNHGKLKDSLCLFHEMV----------EKSGIRPDQITFLEIISSC 654
Score = 161 bits (408), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 200/412 (48%), Gaps = 16/412 (3%)
Query: 47 AQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTS 106
QS ++++ + M+++GV PD F ++L + + +L KQIH ++ + S
Sbjct: 316 VQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS-ISLD 374
Query: 107 VAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXX 166
+ + ++L++ Y KC ++ A ++F + + D V + +MI+
Sbjct: 375 IFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVK 434
Query: 167 XNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRID 225
+ P TLVSI L L LG+++H + + G D R A++ MYAK GR++
Sbjct: 435 VKISPNEITLVSILPVIGILL-ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 493
Query: 226 EAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACS 285
A +F +D+VSWN++I+ +Q+D A+ M SG+ D V++++AL AC+
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 286 HLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWN 345
+L GK IHG+ ++++ L + + S L+DMY C VF + + + WN
Sbjct: 554 NLPSESFGKAIHGFMIKHS-LASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWN 612
Query: 346 AMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVK 405
++IA + +++ LF EMV +S P+ T ++ +C C EG+ +
Sbjct: 613 SIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSC--CHVGDVDEGVRFF--- 667
Query: 406 RGFEKDKYVQN------ALMDMYSRMGRIEISKSIFGSMD-RRDIVSWNTMI 450
R +D +Q ++D++ R GR+ + SM D W T++
Sbjct: 668 RSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLL 719
Score = 142 bits (359), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 165/332 (49%), Gaps = 20/332 (6%)
Query: 277 LASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKK-ADKGRWVFDG 335
L+ L ACS+ +LR GK++H + + N+ + +S+ ++ MY C +D G+ +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNS-ISGDSYTDERILGMYAMCGSFSDCGKMFYRL 96
Query: 336 ILRR-TVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFL 394
LRR ++ WN++I+ + RN ++A+ + +M+ +P+ +T L+ ACV K F
Sbjct: 97 DLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFG-VSPDVSTFPCLVKACVALKNFK 155
Query: 395 DKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYV 454
+ + V G + +++V ++L+ Y G+I++ +F + ++D V WN M+ GY
Sbjct: 156 GIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYA 215
Query: 455 VCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAY 514
CG D + M+ Q + PN+VT VL C ++H
Sbjct: 216 KCGALDSVIKGFSVMRMDQ-----------ISPNAVTFDCVLSVCASKLLIDLGVQLHGL 264
Query: 515 ALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEA 574
+ + + ++ ++L+ MY+KCG + + +F M + +TWN +I Y G EE+
Sbjct: 265 VVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEES 324
Query: 575 LELFRRMVAEKDSNKEIRPNEVTYIAIFAACS 606
L F M++ + P+ +T+ ++ + S
Sbjct: 325 LTFFYEMISSG-----VLPDAITFSSLLPSVS 351
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 116/280 (41%), Gaps = 19/280 (6%)
Query: 380 LSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD 439
LS LL AC + +H +++ D Y ++ MY+ G +F +D
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 440 --RRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLP 497
R I WN++I+ +V G + AL M + P+ T ++
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKML-----------CFGVSPDVSTFPCLVK 146
Query: 498 GCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVIT 557
C + + + V S+LI Y + G +++ +FD++ ++ +
Sbjct: 147 ACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVI 206
Query: 558 WNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNL 617
WNV++ Y G + ++ F M + +I PN VT+ + + C+ ++D G+ L
Sbjct: 207 WNVMLNGYAKCGALDSVIKGFSVMRMD-----QISPNAVTFDCVLSVCASKLLIDLGVQL 261
Query: 618 FHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTM 657
H + G++ L+ + + GR ++A KL + M
Sbjct: 262 -HGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMM 300
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R +W + AQS + AI + M +G+ D + A L A A + + GK I
Sbjct: 505 RDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAI 564
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAA 147
HG + K AS V ++L++MY KCG+L A +VF + +++ VSWNS+IAA
Sbjct: 565 HGFMIKHSLAS-DVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAA 617
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 459 bits (1182), Expect = e-129, Method: Compositional matrix adjust.
Identities = 258/764 (33%), Positives = 409/764 (53%), Gaps = 28/764 (3%)
Query: 111 NSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACR---FXXXXXXXXXXXXXXXX 167
N++++ + K GD++ A +FD + DR V+W ++ R F
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 168 NVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTF--TNNALVTMYAKLGRI 224
+ P T ++ C++ ++G QVHA+ + G D F +N L+ Y ++ R+
Sbjct: 143 TL-PDHVTFTTLLPGCNDAVPQNAVG-QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRL 200
Query: 225 DEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPAC 284
D A LF +KD V++NT+I+ ++ + E++ M QSG +P T + L A
Sbjct: 201 DLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV 260
Query: 285 SHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVW 344
L G+++H ++ T ++ VG+ ++D Y + + R +FD + +
Sbjct: 261 VGLHDFALGQQLHALSV-TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY 319
Query: 345 NAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVV 404
N +I+ Y++ + + ++ F EM F + +++L + +H +
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQCMG-FDRRNFPFATMLSIAANLSSLQMGRQLHCQAL 378
Query: 405 KRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALN 464
+ +V N+L+DMY++ E ++ IF S+ +R VSW +I+GYV G H L
Sbjct: 379 LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLK 438
Query: 465 LLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDI 524
L M RG + L+ + T TVL ++HA+ ++ ++
Sbjct: 439 LFTKM-RGSN----------LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENV 487
Query: 525 AVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAE 584
GS L+DMYAKCG + + VF++MP RN ++WN LI A+ +G GE A+ F +M+
Sbjct: 488 FSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMI-- 545
Query: 585 KDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRS 644
++P+ V+ + + ACSH G V++G F M +GI P HYAC++DLLGR+
Sbjct: 546 ---ESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRN 602
Query: 645 GRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEP-NVASHYVL 703
GR EA KL+ MP ++ WSS+L AC+IH+N + E AA++L +E A+ YV
Sbjct: 603 GRFAEAEKLMDEMPFEPDEI-MWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVS 661
Query: 704 LSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEY 763
+SNIY++AG W++ D++K M+E G++K P SW+E ++H F + D +HP E+
Sbjct: 662 MSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRK 721
Query: 764 LENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKN 823
+ L + +EGY PDTS V+ DVD++ K L HSERLA+AF L++TP G I V KN
Sbjct: 722 INELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKN 781
Query: 824 LRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
LR C DCH A K ISKIV REI +RD RFHHF G CSCGDYW
Sbjct: 782 LRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 1/152 (0%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+ +W + Q + + M + + D F VLKA+A L LGKQ+
Sbjct: 415 RTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQL 474
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
H + + G +V + LV+MY KCG + A VF+ + DR+ VSWN++I+A
Sbjct: 475 HAFIIRSGNLE-NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGD 533
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSN 185
+ P S +++ + ACS+
Sbjct: 534 GEAAIGAFAKMIESGLQPDSVSILGVLTACSH 565
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/559 (42%), Positives = 340/559 (60%), Gaps = 17/559 (3%)
Query: 309 NSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMV 368
N + L++ Y R VFD + R + WNAMIAG + EF++E + LF EM
Sbjct: 24 NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREM- 82
Query: 369 YESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI 428
+ F+P+ TL S+ ++ + IHGY +K G E D V ++L MY R G++
Sbjct: 83 HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKL 142
Query: 429 EISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPN 488
+ + + SM R++V+WNT+I G G + L L M+ +PN
Sbjct: 143 QDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKIS-----------GCRPN 191
Query: 489 SVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFD 548
+T +TVL C +IHA A+K ++ +AV S+LI MY+KCGCL + F
Sbjct: 192 KITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS 251
Query: 549 QMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHS 608
+ + + W+ +I AYG HG+G+EA+ELF M + +N EI NEV ++ + ACSHS
Sbjct: 252 EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQ--TNMEI--NEVAFLNLLYACSHS 307
Query: 609 GMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWS 668
G+ D+GL LF M +G +P HY C+VDLLGR+G +++A +I++MP V W
Sbjct: 308 GLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIV-IWK 366
Query: 669 SLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMG 728
+LL AC IH+N E+ + K++L ++PN ++ YVLL+N+++SA W ++RK M++
Sbjct: 367 TLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKN 426
Query: 729 VRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVD 788
V+KE G SW EH+ EVH+F GD S +SKE++ YL+ L M+ +GY PDT+ VLHD+D
Sbjct: 427 VKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMD 486
Query: 789 DEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILR 848
+EEKE+ L HSE+LA+AF L+ P G IR+ KNLRVC+DCHVA K+IS I +REI LR
Sbjct: 487 EEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLR 546
Query: 849 DVRRFHHFRNGTCSCGDYW 867
D RFHHF NG CSCGDYW
Sbjct: 547 DGSRFHHFINGKCSCGDYW 565
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 185/376 (49%), Gaps = 19/376 (5%)
Query: 93 IHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFX 152
++G + K Y S+ N L+N Y + GDL A VFD + DR +WN+MIA +F
Sbjct: 16 VYGRMRKKNYMSS-----NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFE 70
Query: 153 XXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTN 211
P +TL S+ + LR +S+G+Q+H YT + G + N
Sbjct: 71 FNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRS-VSIGQQIHGYTIKYGLELDLVVN 129
Query: 212 NALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQ-SGV 270
++L MY + G++ + + + ++LV+WNT+I +QN E +L+LY M++ SG
Sbjct: 130 SSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNG-CPETVLYLYKMMKISGC 188
Query: 271 RPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGR 330
RP+ +T + L +CS L + G++IH A++ V S+L+ MY C
Sbjct: 189 RPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK-IGASSVVAVVSSLISMYSKCGCLGDAA 247
Query: 331 WVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRC 390
F +W++MI+ Y + DEAI+LF M +++ N +LL AC
Sbjct: 248 KAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYAC--S 305
Query: 391 KAFLDKEGIHGY---VVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD-RRDIVSW 446
+ L +G+ + V K GF+ ++D+ R G ++ +++I SM + DIV W
Sbjct: 306 HSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIW 365
Query: 447 NTMITGYVVCGRHDDA 462
T+++ C H +A
Sbjct: 366 KTLLSA---CNIHKNA 378
Score = 109 bits (273), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 145/361 (40%), Gaps = 59/361 (16%)
Query: 403 VVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDA 462
V R +K+ N L++ Y R G + ++ +F M R + +WN MI G + +++
Sbjct: 16 VYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEG 75
Query: 463 LNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLAT 522
L+L +M + P+ TL +V G +IH Y +K L
Sbjct: 76 LSLFREMH-----------GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLEL 124
Query: 523 DIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMV 582
D+ V S+L MY + G L IV MP RN++ WN LIM +G E L L++ M
Sbjct: 125 DLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMK 184
Query: 583 AEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLG 642
RPN++T++ + ++CS + +G + H G + L+ +
Sbjct: 185 ISG-----CRPNKITFVTVLSSCSDLAIRGQGQQI-HAEAIKIGASSVVAVVSSLISMYS 238
Query: 643 RSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIH----------------QNLEVGEIA 686
+ G + +A K + + WSS++ A H N+E+ E+A
Sbjct: 239 KCGCLGDAAKAFSEREDEDEVM--WSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVA 296
Query: 687 AKQLLV-----------------------LEPNVASHYVLLSNIYSSAGLWDQAMDIRKK 723
LL +P + HY + ++ AG DQA I +
Sbjct: 297 FLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGL-KHYTCVVDLLGRAGCLDQAEAIIRS 355
Query: 724 M 724
M
Sbjct: 356 M 356
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 151/334 (45%), Gaps = 8/334 (2%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+ +S + M G PD + +V +AG+ +++G+QIHG+ K+G + V +SL
Sbjct: 74 EGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL-ELDLVVNSSL 132
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
+MY + G L V + R+ V+WN++I + P
Sbjct: 133 AHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNK 192
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFG 232
T V++ +CS+L G+Q+HA + G ++L++MY+K G + +A F
Sbjct: 193 ITFVTVLSSCSDLAI-RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS 251
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEAL-LFLYHMLQSGVRPDGVTLASALPACSHLEMLR 291
+D+D V W+++IS+ + + +EA+ LF Q+ + + V + L ACSH +
Sbjct: 252 EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKD 311
Query: 292 TGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI-LRRTVAVWNAMIAG 350
G E+ + + +VD+ D+ + + ++ + +W +++
Sbjct: 312 KGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 371
Query: 351 YARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLL 384
++ + A ++F E++ PN + LL
Sbjct: 372 CNIHKNAEMAQRVFKEIL---QIDPNDSACYVLL 402
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 111/240 (46%), Gaps = 10/240 (4%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+ AW + AQ+ + Y M +G P+ F VL + + + G+QI
Sbjct: 155 RNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQI 214
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAA-ACRFX 152
H K G AS+ VAV +SL++MY KCG L A F D D V W+SMI+A
Sbjct: 215 HAEAIKIG-ASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQ 273
Query: 153 XXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSN--LRD-GLSL-GKQVHAYTFRNGDWRT 208
N++ +++ +ACS+ L+D GL L V Y F+ G +
Sbjct: 274 GDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPG-LKH 332
Query: 209 FTNNALVTMYAKLGRIDEAKALFGLFDDK-DLVSWNTVISSLSQNDRFEEALLFLYHMLQ 267
+T +V + + G +D+A+A+ K D+V W T++S+ + + E A +LQ
Sbjct: 333 YT--CVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ 390
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 449 bits (1156), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/626 (38%), Positives = 362/626 (57%), Gaps = 27/626 (4%)
Query: 249 LSQNDRFEEALLFL---YHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTD 305
LS++ + +EA+ + + P+ T L AC + L G +I L N
Sbjct: 105 LSKSTKLDEAVTLIENSSSSPSNLSTPEAYT--DLLHACISAKSLHHGIKICSLILNNPS 162
Query: 306 LIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTV---AVWNAMIAGYARNEFDDEAIK 362
L N + S L+ ++ C++ D R +FD + ++ VW AM GY+RN +A+
Sbjct: 163 LRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALI 222
Query: 363 LFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMY 422
++++M+ S P + ++S L ACV K GIH +VKR + D+ V N L+ +Y
Sbjct: 223 VYVDMLC-SFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLY 281
Query: 423 SRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDES 482
G + ++ +F M R++V+WN++I+ R + NL MQ +E
Sbjct: 282 MESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ---------EEM 332
Query: 483 IPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNL 542
I + TL T+LP C EIHA LK K D+ + ++L+DMY KCG +
Sbjct: 333 IGF--SWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEY 390
Query: 543 SRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIF 602
SR VFD M T+++ +WN+++ Y ++G EE + LF M+ + P+ +T++A+
Sbjct: 391 SRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMI-----ESGVAPDGITFVALL 445
Query: 603 AACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMK 662
+ CS +G+ + GL+LF MK + P+ +HYACLVD+LGR+G+++EA K+I+TMP
Sbjct: 446 SGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFK-P 504
Query: 663 KVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRK 722
W SLL +C++H N+ VGEIAAK+L VLEP+ +YV++SNIY+ A +WD IR+
Sbjct: 505 SASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIRE 564
Query: 723 KMKEMGVRKEPGCSWIEHRDEVHKFLAGDA-SHPQSKELHEYLENLLQRMRKEGYVPDTS 781
MK+ GV+KE GCSW++ +D++ F+AG S E + L + + K GY P+TS
Sbjct: 565 MMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTS 624
Query: 782 CVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIV 841
VLHDVD+E K +CGHSERLA + L++T G IR+TKNLRVC DCH K +S++
Sbjct: 625 VVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVT 684
Query: 842 DREIILRDVRRFHHFRNGTCSCGDYW 867
R I+LRD +RFHHF +G CSC DYW
Sbjct: 685 RRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 180/386 (46%), Gaps = 13/386 (3%)
Query: 73 AFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDR 132
A+ +L A L+ G +I + + + + L+ ++ C L A +FD
Sbjct: 133 AYTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDD 192
Query: 133 ISDRDHVS---WNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDG 189
++D ++ W +M R ++P +F++ AC +L+D
Sbjct: 193 VTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKD- 251
Query: 190 LSLGKQVHAYTF-RNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISS 248
L +G+ +HA R N L+ +Y + G D+A+ +F ++++V+WN++IS
Sbjct: 252 LRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISV 311
Query: 249 LSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLID 308
LS+ R E M + + TL + LPACS + L TGKEIH L++ + D
Sbjct: 312 LSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPD 371
Query: 309 NSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMV 368
+ S L+DMY C + + R VFD +L + +A WN M+ YA N +E I LF E +
Sbjct: 372 VPLLNS-LMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLF-EWM 429
Query: 369 YESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYV-VKRGFEKDKYVQN--ALMDMYSRM 425
ES P+ T +LL C L + G+ + +K F +++ L+D+ R
Sbjct: 430 IESGVAPDGITFVALLSGC--SDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRA 487
Query: 426 GRIEISKSIFGSMDRRDIVS-WNTMI 450
G+I+ + + +M + S W +++
Sbjct: 488 GKIKEAVKVIETMPFKPSASIWGSLL 513
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 118/240 (49%), Gaps = 3/240 (1%)
Query: 55 AISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLV 114
A+ Y +M+ + + P NF+ LKA + DL +G+ IH + K V V N L+
Sbjct: 220 ALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQV-VYNVLL 278
Query: 115 NMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSF 174
+Y + G A VFD +S+R+ V+WNS+I+ + + +
Sbjct: 279 KLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWA 338
Query: 175 TLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFT-NNALVTMYAKLGRIDEAKALFGL 233
TL +I ACS + L GK++HA ++ + N+L+ MY K G ++ ++ +F +
Sbjct: 339 TLTTILPACSRVA-ALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDV 397
Query: 234 FDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTG 293
KDL SWN +++ + N EE + M++SGV PDG+T + L CS + G
Sbjct: 398 MLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYG 457
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 449 bits (1156), Expect = e-126, Method: Compositional matrix adjust.
Identities = 266/786 (33%), Positives = 429/786 (54%), Gaps = 56/786 (7%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R +W L Q+ L++I + +M G+ D F +LK + + D +LG QI
Sbjct: 143 RDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQI 202
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
HG V + G T V A++L++MY K + VF I +++ VSW+++IA +
Sbjct: 203 HGIVVRVG-CDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNL 261
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFR-----NGDWRT 208
N + S+ +C+ L + L LG Q+HA+ + +G RT
Sbjct: 262 LSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE-LRLGGQLHAHALKSDFAADGIVRT 320
Query: 209 FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQS 268
A + MYAK + +A+ LF ++ + S+N +I+ SQ + +ALL + ++ S
Sbjct: 321 ----ATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS 376
Query: 269 GVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADK 328
G+ D ++L+ AC+ ++ L G +I+G A++++ +D V +A +DMY C+ +
Sbjct: 377 GLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVC-VANAAIDMYGKCQALAE 435
Query: 329 GRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACV 388
VFD + RR WNA+IA + +N E + LF+ M+ S P+ T S+L AC
Sbjct: 436 AFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML-RSRIEPDEFTFGSILKACT 494
Query: 389 RCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIF----------GSM 438
E IH +VK G + V +L+DMYS+ G IE ++ I G+M
Sbjct: 495 GGSLGYGME-IHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTM 553
Query: 439 DRRD----------IVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPN 488
+ + VSWN++I+GYV+ + +DA L M + + P+
Sbjct: 554 EELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME-----------MGITPD 602
Query: 489 SVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFD 548
T TVL C +IHA +K++L +D+ + S L+DMY+KCG L+ SR++F+
Sbjct: 603 KFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFE 662
Query: 549 QMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHS 608
+ R+ +TWN +I Y HGKGEEA++LF RM+ E I+PN VT+I+I AC+H
Sbjct: 663 KSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILEN-----IKPNHVTFISILRACAHM 717
Query: 609 GMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWS 668
G++D+GL F+ MK ++G++P HY+ +VD+LG+SG+V+ A +LI+ MP V W
Sbjct: 718 GLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV-IWR 776
Query: 669 SLLGACKIHQN-LEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEM 727
+LLG C IH+N +EV E A LL L+P +S Y LLSN+Y+ AG+W++ D+R+ M+
Sbjct: 777 TLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGF 836
Query: 728 GVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDV 787
++KEPGCSW+E +DE+H FL GD +HP+ +E++E L + M+ D S + V
Sbjct: 837 KLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKP----FDDSSFVRGV 892
Query: 788 DDEEKE 793
+ EE++
Sbjct: 893 EVEEED 898
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 190/714 (26%), Positives = 304/714 (42%), Gaps = 83/714 (11%)
Query: 67 VPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTS-------------------- 106
V NF+F V K A L LGKQ H H+ G+ T+
Sbjct: 46 VSTTNFSF--VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSAS 103
Query: 107 ----------VAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXX 156
V N ++N Y K D+ A+ F+ + RD VSWNSM++ +
Sbjct: 104 MVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLK 163
Query: 157 XXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALV 215
++ T I CS L D SLG Q+H R G D +AL+
Sbjct: 164 SIEVFVDMGREGIEFDGRTFAIILKVCSFLED-TSLGMQIHGIVVRVGCDTDVVAASALL 222
Query: 216 TMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGV 275
MYAK R E+ +F +K+ VSW+ +I+ QN+ AL F M +
Sbjct: 223 DMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS 282
Query: 276 TLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDG 335
AS L +C+ L LR G ++H +AL+ +D + V +A +DMY C + +FD
Sbjct: 283 IYASVLRSCAALSELRLGGQLHAHALK-SDFAADGIVRTATLDMYAKCDNMQDAQILFDN 341
Query: 336 ILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLD 395
+NAMI GY++ E +A+ LF ++ S + +LS + AC K +
Sbjct: 342 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLM-SSGLGFDEISLSGVFRACALVKGLSE 400
Query: 396 KEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVV 455
I+G +K D V NA +DMY + + + +F M RRD VSWN +I +
Sbjct: 401 GLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQ 460
Query: 456 CGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYA 515
G+ + L L M R + ++P+ T ++L C EIH+
Sbjct: 461 NGKGYETLFLFVSMLRSR-----------IEPDEFTFGSILKAC-TGGSLGYGMEIHSSI 508
Query: 516 LKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR-NV------------------- 555
+K +A++ +VG +LIDMY+KCG + + + + R NV
Sbjct: 509 VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMC 568
Query: 556 ITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGL 615
++WN +I Y M + E+A LF RM+ I P++ TY + C++ G
Sbjct: 569 VSWNSIISGYVMKEQSEDAQMLFTRMM-----EMGITPDKFTYATVLDTCANLASAGLGK 623
Query: 616 NLFHTMKANHGIEPSSDHYAC--LVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGA 673
+ + E SD Y C LVD+ + G + ++ + + S + W++++
Sbjct: 624 QIHAQVIKK---ELQSDVYICSTLVDMYSKCGDLHDSRLMFE--KSLRRDFVTWNAMICG 678
Query: 674 CKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSA--GLWDQAMDIRKKMK 725
H E I + ++LE +H +S + + A GL D+ ++ MK
Sbjct: 679 YAHHGKGEEA-IQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMK 731
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 449 bits (1155), Expect = e-126, Method: Compositional matrix adjust.
Identities = 267/793 (33%), Positives = 403/793 (50%), Gaps = 117/793 (14%)
Query: 96 HVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXX 155
VFK +SV+ N +++ Y + G+ A +FD + +RD VSWN MI R
Sbjct: 85 RVFKRMPRWSSVSY-NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLG 143
Query: 156 XXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALV 215
F ++ CS W N ++
Sbjct: 144 KAREL-------------FEIMPERDVCS---------------------W-----NTML 164
Query: 216 TMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGV 275
+ YA+ G +D+A+++F +K+ VSWN ++S+ QN + EEA +
Sbjct: 165 SGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF------------- 211
Query: 276 TLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDG 335
K +AL + + + FV KK + R FD
Sbjct: 212 ------------------KSRENWALVSWNCLLGGFVKK---------KKIVEARQFFDS 244
Query: 336 ILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVR-CKAFL 394
+ R V WN +I GYA++ DEA +LF E + FT + + V +
Sbjct: 245 MNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF 304
Query: 395 DKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYV 454
DK E+++ NA++ Y + R+E++K +F M R++ +WNTMITGY
Sbjct: 305 DKMP----------ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYA 354
Query: 455 VCGRHDDALNLLHDMQR-----------GQDDEYEDDESIPL---------KPNSVTLMT 494
CG+ +A NL M + G E++ L + N + +
Sbjct: 355 QCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSS 414
Query: 495 VLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRN 554
L C ++H +K T VG+AL+ MY KCG + + +F +M ++
Sbjct: 415 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD 474
Query: 555 VITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEG 614
+++WN +I Y HG GE AL F M E ++P++ T +A+ +ACSH+G+VD+G
Sbjct: 475 IVSWNTMIAGYSRHGFGEVALRFFESMKREG-----LKPDDATMVAVLSACSHTGLVDKG 529
Query: 615 LNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGAC 674
F+TM ++G+ P+S HYAC+VDLLGR+G +E+A+ L+K MP W +LLGA
Sbjct: 530 RQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFE-PDAAIWGTLLGAS 588
Query: 675 KIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPG 734
++H N E+ E AA ++ +EP + YVLLSN+Y+S+G W +R +M++ GV+K PG
Sbjct: 589 RVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPG 648
Query: 735 CSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKET 794
SWIE +++ H F GD HP+ E+ +LE L RM+K GYV TS VLHDV++EEKE
Sbjct: 649 YSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKER 708
Query: 795 MLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFH 854
M+ HSERLA+A+G++ G IRV KNLRVC DCH A K++++I R IILRD RFH
Sbjct: 709 MVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFH 768
Query: 855 HFRNGTCSCGDYW 867
HF++G+CSCGDYW
Sbjct: 769 HFKDGSCSCGDYW 781
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 125/505 (24%), Positives = 218/505 (43%), Gaps = 59/505 (11%)
Query: 236 DKDLVSWNTVISSLSQNDRFEEALLFLYHMLQ-SGVRPDGVTLASALPACSHLEMLRTGK 294
D D+ WN ISS + R EAL M + S V +G + S E+ R
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNG--MISGYLRNGEFELARKLF 118
Query: 295 EIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARN 354
+ + DL+ + ++ Y + K R +F+ + R V WN M++GYA+N
Sbjct: 119 D----EMPERDLVS----WNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQN 170
Query: 355 EFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYV 414
D+A +F M ++D + N +LL A V+ +E + + + +
Sbjct: 171 GCVDDARSVFDRMPEKNDVSWN-----ALLSAYVQNSKM--EEACMLFKSRENWALVSW- 222
Query: 415 QNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHD------ 468
N L+ + + +I ++ F SM+ RD+VSWNT+ITGY G+ D+A L +
Sbjct: 223 -NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV 281
Query: 469 -----------MQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALK 517
R ++ E + +P + N V+ +L G E+
Sbjct: 282 FTWTAMVSGYIQNRMVEEARELFDKMPER-NEVSWNAMLAGYVQGERMEMAKEL----FD 336
Query: 518 QKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALEL 577
+++ + +I YA+CG ++ ++ +FD+MP R+ ++W +I Y G EAL L
Sbjct: 337 VMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRL 396
Query: 578 FRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACL 637
F +M E R N ++ + + C+ ++ G L H G E L
Sbjct: 397 FVQMEREGG-----RLNRSSFSSALSTCADVVALELGKQL-HGRLVKGGYETGCFVGNAL 450
Query: 638 VDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAK-----QLLV 692
+ + + G +EEA L K M K + +W++++ H GE+A + +
Sbjct: 451 LLMYCKCGSIEEANDLFKEMAG--KDIVSWNTMIAGYSRHG---FGEVALRFFESMKREG 505
Query: 693 LEPNVASHYVLLSNIYSSAGLWDQA 717
L+P+ A+ +LS S GL D+
Sbjct: 506 LKPDDATMVAVLSAC-SHTGLVDKG 529
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 9/220 (4%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R P +W + +QS +A+ + M G + +F + L A V L LGKQ+
Sbjct: 372 RDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQL 431
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
HG + K GY T V N+L+ MY KCG + A+ +F ++ +D VSWN+MIA R
Sbjct: 432 HGRLVKGGY-ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGF 490
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNN- 212
+ P T+V++ ACS+ GL + + YT D+ N+
Sbjct: 491 GEVALRFFESMKREGLKPDDATMVAVLSACSHT--GLVDKGRQYFYTMTQ-DYGVMPNSQ 547
Query: 213 ---ALVTMYAKLGRIDEAKALF-GLFDDKDLVSWNTVISS 248
+V + + G +++A L + + D W T++ +
Sbjct: 548 HYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGA 587
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 255/670 (38%), Positives = 393/670 (58%), Gaps = 32/670 (4%)
Query: 208 TFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQ 267
F+ N +V YAK +I A+ LF D VS+NT+IS + A++ M +
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK 133
Query: 268 SGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKAD 327
G DG TL+ + AC + + K++H +++ + S V +A V Y
Sbjct: 134 LGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSV-SGGFDSYSSVNNAFVTYYSKGGLLR 190
Query: 328 KGRWVFDGI--LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLP 385
+ VF G+ LR V+ WN+MI Y +++ +A+ L+ EM+++ F + TL+S+L
Sbjct: 191 EAVSVFYGMDELRDEVS-WNSMIVAYGQHKEGAKALALYKEMIFKG-FKIDMFTLASVLN 248
Query: 386 ACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIE---ISKSIFGSMDRRD 442
A + HG ++K GF ++ +V + L+D YS+ G + S+ +F + D
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPD 308
Query: 443 IVSWNTMITGYVVCGR-HDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXX 501
+V WNTMI+GY + ++A+ MQR I +P+ + + V C
Sbjct: 309 LVVWNTMISGYSMNEELSEEAVKSFRQMQR-----------IGHRPDDCSFVCVTSACSN 357
Query: 502 XXXXXXXXEIHAYALKQKLATD-IAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNV 560
+IH A+K + ++ I+V +ALI +Y K G L +R VFD+MP N +++N
Sbjct: 358 LSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNC 417
Query: 561 LIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHT 620
+I Y HG G EAL L++RM+ DS I PN++T++A+ +AC+H G VDEG F+T
Sbjct: 418 MIKGYAQHGHGTEALLLYQRML---DSG--IAPNKITFVAVLSACAHCGKVDEGQEYFNT 472
Query: 621 MKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNL 680
MK IEP ++HY+C++DLLGR+G++EEA + I MP V AW++LLGAC+ H+N+
Sbjct: 473 MKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSV-AWAALLGACRKHKNM 531
Query: 681 EVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEH 740
+ E AA +L+V++P A+ YV+L+N+Y+ A W++ +RK M+ +RK+PGCSWIE
Sbjct: 532 ALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEV 591
Query: 741 RDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDT--SCVLHDVDDEEKETMLCG 798
+ + H F+A D SHP +E++EYLE ++++M+K GYV D + V D E E M G
Sbjct: 592 KKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLG 651
Query: 799 -HSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFR 857
HSE+LA+AFGL++T G + V KNLR+C DCH A KF+S + REII+RD RFH F+
Sbjct: 652 HHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFK 711
Query: 858 NGTCSCGDYW 867
+G CSCGDYW
Sbjct: 712 DGKCSCGDYW 721
Score = 177 bits (448), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 152/536 (28%), Positives = 231/536 (43%), Gaps = 59/536 (11%)
Query: 74 FPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAH------ 127
F +L + DL GK +H K ++S ++N VN+Y KCG L+ A
Sbjct: 11 FRDLLLKSVAERDLFTGKSLHALYVK-SIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 128 -------------------------HVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXX 162
+FD I D VS+N++I+
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 163 XXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKL 221
+ FTL + AC D + L KQ+H ++ G D + NNA VT Y+K
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACC---DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKG 186
Query: 222 GRIDEAKALF-GLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASA 280
G + EA ++F G+ + +D VSWN++I + Q+ +AL M+ G + D TLAS
Sbjct: 187 GLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246
Query: 281 LPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKAD---KGRWVFDGIL 337
L A + L+ L G++ HG L NS VGS L+D Y C D VF IL
Sbjct: 247 LNALTSLDHLIGGRQFHG-KLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL 305
Query: 338 RRTVAVWNAMIAGYARN-EFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDK 396
+ VWN MI+GY+ N E +EA+K F +M P+ + + AC +
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQM-QRIGHRPDDCSFVCVTSACSNLSSPSQC 364
Query: 397 EGIHGYVVKRGFEKDKY-VQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVV 455
+ IHG +K ++ V NAL+ +Y + G ++ ++ +F M + VS+N MI GY
Sbjct: 365 KQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQ 424
Query: 456 CGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYA 515
G +AL L M D I PN +T + VL C E +
Sbjct: 425 HGHGTEALLLYQRML---------DSGIA--PNKITFVAVLSACAHCGKVDEGQE-YFNT 472
Query: 516 LKQ--KLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR-NVITWNVLIMAYGMH 568
+K+ K+ + S +ID+ + G L + D MP + + W L+ A H
Sbjct: 473 MKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 141/324 (43%), Gaps = 9/324 (2%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R +W + Q +A++ Y M+ G D F +VL A ++ L G+Q
Sbjct: 203 RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQF 262
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAG---AHHVFDRISDRDHVSWNSMIAA-AC 149
HG + K G+ S V + L++ Y KCG G + VF I D V WN+MI+ +
Sbjct: 263 HGKLIKAGFHQNS-HVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSM 321
Query: 150 RFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRN--GDWR 207
P + V + ACSNL S KQ+H ++ R
Sbjct: 322 NEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSP-SQCKQIHGLAIKSHIPSNR 380
Query: 208 TFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQ 267
NNAL+++Y K G + +A+ +F + + VS+N +I +Q+ EALL ML
Sbjct: 381 ISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLD 440
Query: 268 SGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKAD 327
SG+ P+ +T + L AC+H + G+E + + S ++D+ K +
Sbjct: 441 SGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLE 500
Query: 328 KGRWVFDGILRRTVAV-WNAMIAG 350
+ D + + +V W A++
Sbjct: 501 EAERFIDAMPYKPGSVAWAALLGA 524
Score = 113 bits (282), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 159/355 (44%), Gaps = 24/355 (6%)
Query: 309 NSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMV 368
N F + +V Y K R +FD I + +N +I+GYA A+ LF M
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRM- 131
Query: 369 YESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI 428
+ F + TLS L+ AC C + +H + V GF+ V NA + YS+ G +
Sbjct: 132 RKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLL 189
Query: 429 EISKSIFGSMDR-RDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKP 487
+ S+F MD RD VSWN+MI Y G+H + L Y++ K
Sbjct: 190 REAVSVFYGMDELRDEVSWNSMIVAY---GQHKEGAKAL--------ALYKEMIFKGFKI 238
Query: 488 NSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKC-GCLNL--SR 544
+ TL +VL + H +K + VGS LID Y+KC GC + S
Sbjct: 239 DMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSE 298
Query: 545 IVFDQMPTRNVITWNVLIMAYGMHGK-GEEALELFRRMVAEKDSNKEIRPNEVTYIAIFA 603
VF ++ + +++ WN +I Y M+ + EEA++ FR+M RP++ +++ + +
Sbjct: 299 KVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQM-----QRIGHRPDDCSFVCVTS 353
Query: 604 ACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMP 658
ACS+ + + +H L+ L +SG +++A + MP
Sbjct: 354 ACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 127/288 (44%), Gaps = 23/288 (7%)
Query: 409 EKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHD 468
E + + N ++ Y++ +I I++ +F + + D VS+NT+I+GY A+ L
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 469 MQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGS 528
M++ + + + TL ++ C ++H +++ + +V +
Sbjct: 131 MRK-----------LGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDSYSSVNN 177
Query: 529 ALIDMYAKCGCLNLSRIVFDQM-PTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDS 587
A + Y+K G L + VF M R+ ++WN +I+AYG H +G +AL L++ M+
Sbjct: 178 AFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIF---- 233
Query: 588 NKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRV 647
K + + T ++ A + + G FH G +S + L+D + G
Sbjct: 234 -KGFKIDMFTLASVLNALTSLDHLIGGRQ-FHGKLIKAGFHQNSHVGSGLIDFYSKCGGC 291
Query: 648 EEAYKLIKTMPSNMKK-VDAWSSLLGACKIHQNLEVGEIAAKQLLVLE 694
+ Y K + + W++++ + N E+ E A K ++
Sbjct: 292 DGMYDSEKVFQEILSPDLVVWNTMISGYSM--NEELSEEAVKSFRQMQ 337
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 268/771 (34%), Positives = 392/771 (50%), Gaps = 98/771 (12%)
Query: 110 ANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNV 169
AN + + G + A +FD + SWNSM+A N+
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAG-----------------YFANL 62
Query: 170 DPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKA 229
P RD L ++ D + N LV+ Y K G IDEA+
Sbjct: 63 MP---------------RDARKLFDEM-------PDRNIISWNGLVSGYMKNGEIDEARK 100
Query: 230 LFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALP------A 283
+F L ++++VSW ++ N + + A + M + V L L A
Sbjct: 101 VFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDA 160
Query: 284 CSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAV 343
C EM+ I ++++ C + D+ R +FD + R+V
Sbjct: 161 CKLYEMIPDKDNI---------------ARTSMIHGLCKEGRVDEAREIFDEMSERSVIT 205
Query: 344 WNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLS--SLLPACVRCKAFLDKEGIHG 401
W M+ GY +N D+A K+F D P T +S S+L V+ D E +
Sbjct: 206 WTTMVTGYGQNNRVDDARKIF-------DVMPEKTEVSWTSMLMGYVQNGRIEDAEEL-- 256
Query: 402 YVVKRGFE----KDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCG 457
FE K NA++ + G I ++ +F SM R+ SW T+I + G
Sbjct: 257 ------FEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNG 310
Query: 458 RHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALK 517
+AL+L MQ+ ++P TL+++L C ++HA ++
Sbjct: 311 FELEALDLFILMQKQG-----------VRPTFPTLISILSVCASLASLHHGKQVHAQLVR 359
Query: 518 QKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALEL 577
+ D+ V S L+ MY KCG L S+++FD+ P++++I WN +I Y HG GEEAL++
Sbjct: 360 CQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKV 419
Query: 578 FRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACL 637
F E + +PNEVT++A +ACS++GMV+EGL ++ +M++ G++P + HYAC+
Sbjct: 420 F----CEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACM 475
Query: 638 VDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNV 697
VD+LGR+GR EA ++I +M W SLLGAC+ H L+V E AK+L+ +EP
Sbjct: 476 VDMLGRAGRFNEAMEMIDSMTVE-PDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPEN 534
Query: 698 ASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDA-SHPQ 756
+ Y+LLSN+Y+S G W ++RK MK VRK PGCSW E ++VH F G SHP+
Sbjct: 535 SGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPE 594
Query: 757 SKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGT 816
+ + + L+ L +R+ GY PD S LHDVD+EEK L HSERLA+A+ LL G
Sbjct: 595 QESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGI 654
Query: 817 TIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
IRV KNLRVC+DCH A K ISK+ +REIILRD RFHHFRNG CSC DYW
Sbjct: 655 PIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 99/193 (51%), Gaps = 3/193 (1%)
Query: 107 VAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXX 166
V N++++ G+ G++A A VFD + +R+ SW ++I R
Sbjct: 265 VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQK 324
Query: 167 XNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFR-NGDWRTFTNNALVTMYAKLGRID 225
V PT TL+SI C++L L GKQVHA R D + + L+TMY K G +
Sbjct: 325 QGVRPTFPTLISILSVCASLA-SLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELV 383
Query: 226 EAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSG-VRPDGVTLASALPAC 284
++K +F F KD++ WN++IS + + EEAL M SG +P+ VT + L AC
Sbjct: 384 KSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSAC 443
Query: 285 SHLEMLRTGKEIH 297
S+ M+ G +I+
Sbjct: 444 SYAGMVEEGLKIY 456
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 121/314 (38%), Gaps = 56/314 (17%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+ ++W +++ ++ L+A+ + M GV P ++L A + L+ GKQ+
Sbjct: 294 RNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQV 353
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAA-ACRFX 152
H + + + V VA+ L+ MY KCG+L + +FDR +D + WNS+I+ A
Sbjct: 354 HAQLVRCQF-DVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGL 412
Query: 153 XXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSN---LRDGLSLGKQVHAYTFRNGDWRTF 209
+ P T V+ ACS + +GL + + + + F
Sbjct: 413 GEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMES---------VF 463
Query: 210 TNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSG 269
+ YA ++ L + RF EA+ + M
Sbjct: 464 GVKPITAHYA------------------------CMVDMLGRAGRFNEAMEMIDSMT--- 496
Query: 270 VRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLI----DNSFVGSALVDMYCNCKK 325
V PD S L AC RT ++ LI +NS L +MY
Sbjct: 497 VEPDAAVWGSLLGAC------RTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMY----- 545
Query: 326 ADKGRWVFDGILRR 339
A +GRW LR+
Sbjct: 546 ASQGRWADVAELRK 559
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/655 (36%), Positives = 366/655 (55%), Gaps = 36/655 (5%)
Query: 240 VSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGY 299
+ +N + LS++ +LF + G R D + L A S + L G E+HG
Sbjct: 77 IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGV 136
Query: 300 ALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDE 359
A + L D FV + +DMY +C + + R VFD + R V WN MI Y R DE
Sbjct: 137 AFKIATLCD-PFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDE 195
Query: 360 AIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALM 419
A KLF EM +S+ P+ L +++ AC R I+ ++++ D ++ AL+
Sbjct: 196 AFKLFEEM-KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALV 254
Query: 420 DMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQD----- 474
MY+ G +++++ F M R++ M++GY CGR DDA ++ D +D
Sbjct: 255 TMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDA-QVIFDQTEKKDLVCWT 313
Query: 475 ----------------DEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQ 518
+E+ +KP+ V++ +V+ C +H+
Sbjct: 314 TMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN 373
Query: 519 KLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELF 578
L +++++ +ALI+MYAKCG L+ +R VF++MP RNV++W+ +I A MHG+ +AL LF
Sbjct: 374 GLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLF 433
Query: 579 RRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLV 638
RM E + PNEVT++ + CSHSG+V+EG +F +M + I P +HY C+V
Sbjct: 434 ARMKQEN-----VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMV 488
Query: 639 DLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVA 698
DL GR+ + EA ++I++MP V W SL+ AC+IH LE+G+ AAK++L LEP+
Sbjct: 489 DLFGRANLLREALEVIESMPV-ASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHD 547
Query: 699 SHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSK 758
VL+SNIY+ W+ +IR+ M+E V KE G S I+ + H+FL GD H QS
Sbjct: 548 GALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSN 607
Query: 759 ELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGT-- 816
E++ L+ ++ +++ GYVPD VL DV++EEK+ ++ HSE+LA+ FGL+N
Sbjct: 608 EIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEK 667
Query: 817 ----TIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
IR+ KNLRVC DCH+ K +SK+ +REII+RD RFH ++NG CSC DYW
Sbjct: 668 DSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 173/376 (46%), Gaps = 34/376 (9%)
Query: 43 LRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGY 102
LR ++SS I Y + G D F+F +LKA + V+ L G ++HG FK
Sbjct: 83 LRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIAT 142
Query: 103 ASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXX 162
V ++MY CG + A +VFD +S RD V+WN+MI CRF
Sbjct: 143 LCDPF-VETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFE 201
Query: 163 XXXXXNVDPTSFTLVSIAHAC---SNLR----------------DGLSLGKQVHAYT--- 200
NV P L +I AC N+R D L V Y
Sbjct: 202 EMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAG 261
Query: 201 --------FRNGDWRT-FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQ 251
FR R F + A+V+ Y+K GR+D+A+ +F + KDLV W T+IS+ +
Sbjct: 262 CMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVE 321
Query: 252 NDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSF 311
+D +EAL M SG++PD V++ S + AC++L +L K +H + L
Sbjct: 322 SDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHS-CIHVNGLESELS 380
Query: 312 VGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYES 371
+ +AL++MY C D R VF+ + RR V W++MI + + +A+ LF M E
Sbjct: 381 INNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQE- 439
Query: 372 DFTPNSTTLSSLLPAC 387
+ PN T +L C
Sbjct: 440 NVEPNEVTFVGVLYGC 455
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 4/161 (2%)
Query: 39 WIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVF 98
W + +S +A+ + M +G+ PD + +V+ A A + L+ K +H +
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIH 371
Query: 99 KFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXX 158
G S +++ N+L+NMY KCG L VF+++ R+ VSW+SMI A
Sbjct: 372 VNGLES-ELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDAL 430
Query: 159 XXXXXXXXXNVDPTSFTLVSIAHACSNLRDGL-SLGKQVHA 198
NV+P T V + + CS+ GL GK++ A
Sbjct: 431 SLFARMKQENVEPNEVTFVGVLYGCSH--SGLVEEGKKIFA 469
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/725 (34%), Positives = 398/725 (54%), Gaps = 54/725 (7%)
Query: 177 VSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDD 236
+S+ H C L+ + Q+ N ++ + + A ++F +
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 237 KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEI 296
+L+ WNT+ + + AL M+ G+ P+ T L +C+ + + G++I
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 297 HGYALR-NTDLIDNSFVGSALVDMYCNCKKADKGRWVFDG-------------------- 335
HG+ L+ DL + +V ++L+ MY + + VFD
Sbjct: 157 HGHVLKLGCDL--DLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214
Query: 336 -----------ILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLL 384
I + V WNAMI+GYA EA++LF +M+ +++ P+ +T+ +++
Sbjct: 215 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM-KTNVRPDESTMVTVV 273
Query: 385 PACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIV 444
AC + + +H ++ GF + + NAL+D+YS+ G +E + +F + +D++
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333
Query: 445 SWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXX 504
SWNT+I GY + +AL L +M R + PN VT++++LP C
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGE-----------TPNDVTMLSILPACAHLGA 382
Query: 505 XXXXXEIHAYALK--QKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLI 562
IH Y K + + ++ ++LIDMYAKCG + + VF+ + +++ +WN +I
Sbjct: 383 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442
Query: 563 MAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMK 622
+ MHG+ + + +LF RM I+P+++T++ + +ACSHSGM+D G ++F TM
Sbjct: 443 FGFAMHGRADASFDLFSRM-----RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMT 497
Query: 623 ANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEV 682
++ + P +HY C++DLLG SG +EA ++I M V W SLL ACK+H N+E+
Sbjct: 498 QDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGV-IWCSLLKACKMHGNVEL 556
Query: 683 GEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRD 742
GE A+ L+ +EP YVLLSNIY+SAG W++ R + + G++K PGCS IE
Sbjct: 557 GESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDS 616
Query: 743 EVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSER 802
VH+F+ GD HP+++E++ LE + + K G+VPDTS VL ++++E KE L HSE+
Sbjct: 617 VVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEK 676
Query: 803 LAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCS 862
LAIAFGL++T PGT + + KNLRVC +CH ATK ISKI REII RD RFHHFR+G CS
Sbjct: 677 LAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCS 736
Query: 863 CGDYW 867
C DYW
Sbjct: 737 CNDYW 741
Score = 196 bits (498), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 185/382 (48%), Gaps = 36/382 (9%)
Query: 39 WIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVF 98
W R A SS + A+ Y M++ G+ P+++ FP VLK+ A G+QIHGHV
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161
Query: 99 KFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDR-------------------------- 132
K G + V SL++MY + G L AH VFD+
Sbjct: 162 KLG-CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQ 220
Query: 133 -----ISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLR 187
I +D VSWN+MI+ NV P T+V++ AC+
Sbjct: 221 KLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ-S 279
Query: 188 DGLSLGKQVHAYTFRNGDWRTF-TNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVI 246
+ LG+QVH + +G NAL+ +Y+K G ++ A LF KD++SWNT+I
Sbjct: 280 GSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLI 339
Query: 247 SSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDL 306
+ + ++EALL ML+SG P+ VT+ S LPAC+HL + G+ IH Y +
Sbjct: 340 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG 399
Query: 307 IDN-SFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFI 365
+ N S + ++L+DMY C + VF+ IL ++++ WNAMI G+A + D + LF
Sbjct: 400 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFS 459
Query: 366 EMVYESDFTPNSTTLSSLLPAC 387
M + P+ T LL AC
Sbjct: 460 RM-RKIGIQPDDITFVGLLSAC 480
Score = 126 bits (316), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 129/264 (48%), Gaps = 9/264 (3%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W + A++ ++ +A+ + +M+ V PD V+ A A + LG+Q+H +
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
G+ S ++ + N+L+++Y KCG+L A +F+R+ +D +SWN++I
Sbjct: 293 DDHGFGS-NLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEA 351
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTN-----N 212
P T++SI AC++L + +G+ +H Y + + TN
Sbjct: 352 LLLFQEMLRSGETPNDVTMLSILPACAHL-GAIDIGRWIHVYI--DKRLKGVTNASSLRT 408
Query: 213 ALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRP 272
+L+ MYAK G I+ A +F K L SWN +I + + R + + M + G++P
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQP 468
Query: 273 DGVTLASALPACSHLEMLRTGKEI 296
D +T L ACSH ML G+ I
Sbjct: 469 DDITFVGLLSACSHSGMLDLGRHI 492
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 443 bits (1140), Expect = e-124, Method: Compositional matrix adjust.
Identities = 251/703 (35%), Positives = 392/703 (55%), Gaps = 33/703 (4%)
Query: 176 LVSIAHACSNLRDGLS-LGKQVHAYTFRNGD-WRTFTNNALVTMYAKLGRIDEAKALFGL 233
LVSI C+ R GLS G QVH Y ++G T+N L+ MY K A +F
Sbjct: 9 LVSILRVCT--RKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDS 66
Query: 234 FDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTG 293
++++VSW+ ++S N + +L M + G+ P+ T ++ L AC L L G
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 294 KEIHGYALR-NTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYA 352
+IHG+ L+ +++ VG++LVDMY C + ++ VF I+ R++ WNAMIAG+
Sbjct: 127 LQIHGFCLKIGFEMMVE--VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFV 184
Query: 353 RNEFDDEAIKLFIEMVYESDFT--PNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFE- 409
+ +A+ F M+ E++ P+ TL+SLL AC + IHG++V+ GF
Sbjct: 185 HAGYGSKALDTF-GMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHC 243
Query: 410 -KDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHD 468
+ +L+D+Y + G + ++ F + + ++SW+++I GY G +A+ L
Sbjct: 244 PSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKR 303
Query: 469 MQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGS 528
+Q + + +S L +++ ++ A A+K + +V +
Sbjct: 304 LQE-----------LNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLN 352
Query: 529 ALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSN 588
+++DMY KCG ++ + F +M ++VI+W V+I YG HG G++++ +F M+
Sbjct: 353 SVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML-----R 407
Query: 589 KEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVE 648
I P+EV Y+A+ +ACSHSGM+ EG LF + HGI+P +HYAC+VDLLGR+GR++
Sbjct: 408 HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLK 467
Query: 649 EAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIY 708
EA LI TMP V W +LL C++H ++E+G+ K LL ++ ++YV++SN+Y
Sbjct: 468 EAKHLIDTMPIK-PNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLY 526
Query: 709 SSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLL 768
AG W++ + R+ G++KE G SW+E EVH F +G+ SHP + + E L+
Sbjct: 527 GQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAE 586
Query: 769 QRMRKE-GYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLN---TPPGTTIRVTKNL 824
+R+R+E GYV LHD+DDE KE L HSE+LAI L G TIRV KNL
Sbjct: 587 RRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNL 646
Query: 825 RVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
RVC DCH K +SKI ++RD RFH F +G CSCGDYW
Sbjct: 647 RVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/537 (25%), Positives = 253/537 (47%), Gaps = 23/537 (4%)
Query: 67 VPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGA 126
+P ++L+ + G Q+H ++ K G + ++ +N L++MY KC + A
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSG-SGLNLITSNYLIDMYCKCREPLMA 60
Query: 127 HHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNL 186
+ VFD + +R+ VSW+++++ + P FT + AC L
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKAC-GL 119
Query: 187 RDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTV 245
+ L G Q+H + + G + N+LV MY+K GRI+EA+ +F D+ L+SWN +
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179
Query: 246 ISSLSQNDRFEEALLFLYHMLQSGV--RPDGVTLASALPACSHLEMLRTGKEIHGYALRN 303
I+ +AL M ++ + RPD TL S L ACS M+ GK+IHG+ +R+
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 239
Query: 304 T-DLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIK 362
++ + +LVD+Y C R FD I +T+ W+++I GYA+ EA+
Sbjct: 240 GFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMG 299
Query: 363 LFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMY 422
LF + + E + +S LSS++ + + VK + V N+++DMY
Sbjct: 300 LF-KRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMY 358
Query: 423 SRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDES 482
+ G ++ ++ F M +D++SW +ITGY G ++ + ++M R
Sbjct: 359 LKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHN--------- 409
Query: 483 IPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALK-QKLATDIAVGSALIDMYAKCGCLN 541
++P+ V + VL C E+ + L+ + + + ++D+ + G L
Sbjct: 410 --IEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLK 467
Query: 542 LSRIVFDQMPTR-NVITWNVLIMAYGMHGK---GEEALELFRRMVAEKDSNKEIRPN 594
++ + D MP + NV W L+ +HG G+E ++ R+ A+ +N + N
Sbjct: 468 EAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSN 524
Score = 177 bits (448), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 198/414 (47%), Gaps = 14/414 (3%)
Query: 55 AISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLV 114
++S ++ M G+ P+ F F LKA +N L G QIHG K G+ V V NSLV
Sbjct: 91 SLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGF-EMMVEVGNSLV 149
Query: 115 NMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD--PT 172
+MY KCG + A VF RI DR +SWN+MIA N+ P
Sbjct: 150 DMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPD 209
Query: 173 SFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG---DWRTFTNNALVTMYAKLGRIDEAKA 229
FTL S+ ACS+ + GKQ+H + R+G +LV +Y K G + A+
Sbjct: 210 EFTLTSLLKACSS-TGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARK 268
Query: 230 LFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEM 289
F +K ++SW+++I +Q F EA+ + + + D L+S + + +
Sbjct: 269 AFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFAL 328
Query: 290 LRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIA 349
LR GK++ A++ ++ S + S +VDMY C D+ F + + V W +I
Sbjct: 329 LRQGKQMQALAVKLPSGLETSVLNS-VVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVIT 387
Query: 350 GYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFE 409
GY ++ +++++F EM+ + P+ ++L AC + E + +++
Sbjct: 388 GYGKHGLGKKSVRIFYEML-RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGI 446
Query: 410 KDKYVQNA-LMDMYSRMGRIEISKSIFGSMD-RRDIVSWNTMITGYVVCGRHDD 461
K + A ++D+ R GR++ +K + +M + ++ W T+++ +C H D
Sbjct: 447 KPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS---LCRVHGD 497
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 9/215 (4%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W + AQ F++A+ + + D+FA +++ A L GKQ+
Sbjct: 280 SWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALA 339
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
K + +V NS+V+MY KCG + A F + +D +SW +I +
Sbjct: 340 VKLP-SGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKS 398
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACSN---LRDGLSL-GKQVHAYTFRNGDWRTFTNNA 213
N++P +++ ACS+ +++G L K + + + R
Sbjct: 399 VRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKP---RVEHYAC 455
Query: 214 LVTMYAKLGRIDEAKALFGLFDDKDLVS-WNTVIS 247
+V + + GR+ EAK L K V W T++S
Sbjct: 456 VVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 490
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/628 (37%), Positives = 353/628 (56%), Gaps = 27/628 (4%)
Query: 242 WNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYAL 301
WN + L+ F E++ ML+SG PD + L +C+ L + +G+++H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 302 RNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRT--VAVWNAMIAGYARNEFDDE 359
+ FV +AL+ MYC C R VF+ + + +NA+I+GY N +
Sbjct: 81 KG-GCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 360 AIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALM 419
A +F M E+ + +S T+ L+P C + +HG VK G + + V N+ +
Sbjct: 140 AAYMFRRM-KETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFI 198
Query: 420 DMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYED 479
MY + G +E + +F M + +++WN +I+GY G D L L YE
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLEL-----------YEQ 247
Query: 480 DESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGC 539
+S + P+ TL++VL C E+ ++ V +A I MYA+CG
Sbjct: 248 MKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGN 307
Query: 540 LNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYI 599
L +R VFD MP +++++W +I YGMHG GE L LF M+ + IRP+ ++
Sbjct: 308 LAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMI-----KRGIRPDGAVFV 362
Query: 600 AIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPS 659
+ +ACSHSG+ D+GL LF MK + +EP +HY+CLVDLLGR+GR++EA + I++MP
Sbjct: 363 MVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPV 422
Query: 660 NMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMD 719
W +LLGACKIH+N+++ E+A +++ EPN +YVL+SNIYS + +
Sbjct: 423 EPDGA-VWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWR 481
Query: 720 IRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPD 779
IR M+E RK+PG S++EH+ VH FLAGD SH Q++E+H L+ L E V +
Sbjct: 482 IRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL------ETSVME 535
Query: 780 TSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISK 839
+ + EE + HSERLAIAFG+LN+ PGT I V KNLRVC DCHV K +SK
Sbjct: 536 LAGNMDCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSK 595
Query: 840 IVDREIILRDVRRFHHFRNGTCSCGDYW 867
IVDR+ ++RD RFH+F++G CSC DYW
Sbjct: 596 IVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 202/421 (47%), Gaps = 13/421 (3%)
Query: 37 SAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGH 96
+ W LR A S F ++IS Y +M+ +G PD F+FP +LK+ A ++ G+Q+H H
Sbjct: 19 TPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 78
Query: 97 VFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDR--ISDRDHVSWNSMIAAACRFXXX 154
V K G T V +L++MY KCG +A A VF+ S + V +N++I+
Sbjct: 79 VTK-GGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 155 XXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNA 213
V S T++ + C+ + + L LG+ +H + G D N+
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCT-VPEYLWLGRSLHGQCVKGGLDSEVAVLNS 196
Query: 214 LVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPD 273
+TMY K G ++ + LF K L++WN VIS SQN + L M SGV PD
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPD 256
Query: 274 GVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVF 333
TL S L +C+HL + G E+ G + + + N FV +A + MY C K R VF
Sbjct: 257 PFTLVSVLSSCAHLGAKKIGHEV-GKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315
Query: 334 DGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAF 393
D + +++ W AMI Y + + + LF +M+ + P+ +L AC +
Sbjct: 316 DIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMI-KRGIRPDGAVFVMVLSAC--SHSG 372
Query: 394 LDKEGIHGY-VVKRGFEKDKYVQ--NALMDMYSRMGRIEISKSIFGSMD-RRDIVSWNTM 449
L +G+ + +KR ++ + + + L+D+ R GR++ + SM D W +
Sbjct: 373 LTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGAL 432
Query: 450 I 450
+
Sbjct: 433 L 433
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 440 bits (1132), Expect = e-123, Method: Compositional matrix adjust.
Identities = 261/773 (33%), Positives = 397/773 (51%), Gaps = 101/773 (13%)
Query: 187 RDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALF-------------- 231
R L L + VH G R N L+ +Y K ++ A+ LF
Sbjct: 27 RTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTM 86
Query: 232 --------------GLFDD-----KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRP 272
G+F+ +D V +N +I+ S N+ A+ M G +P
Sbjct: 87 VSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKP 146
Query: 273 DGVTLASALPACSHL-EMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADK--- 328
D T AS L + + + + + H AL++ S V +ALV +Y C +
Sbjct: 147 DNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITS-VSNALVSVYSKCASSPSLLH 205
Query: 329 -GRWVFDGILRRTVAVW--------------------------------NAMIAGYARNE 355
R VFD IL + W NAMI+GY
Sbjct: 206 SARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRG 265
Query: 356 FDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQ 415
F EA+++ MV S + T S++ AC + +H YV++R + +
Sbjct: 266 FYQEALEMVRRMV-SSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFD 323
Query: 416 NALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQR---- 471
N+L+ +Y + G+ + +++IF M +D+VSWN +++GYV G +A + +M+
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL 383
Query: 472 -------GQDDEYEDDESIPL---------KPNSVTLMTVLPGCXXXXXXXXXXEIHAYA 515
G + +E + L +P + C + HA
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL 443
Query: 516 LKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEAL 575
LK + ++ G+ALI MYAKCG + +R VF MP + ++WN LI A G HG G EA+
Sbjct: 444 LKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAV 503
Query: 576 ELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYA 635
+++ M+ K IRP+ +T + + ACSH+G+VD+G F +M+ + I P +DHYA
Sbjct: 504 DVYEEML-----KKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYA 558
Query: 636 CLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEP 695
L+DLL RSG+ +A +I+++P + W +LL C++H N+E+G IAA +L L P
Sbjct: 559 RLIDLLCRSGKFSDAESVIESLPFK-PTAEIWEALLSGCRVHGNMELGIIAADKLFGLIP 617
Query: 696 NVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHP 755
Y+LLSN++++ G W++ +RK M++ GV+KE CSWIE +VH FL D SHP
Sbjct: 618 EHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHP 677
Query: 756 QSKELHEYLENLLQRMRKEGYVPDTSCVLHDVD-DEEKETMLCGHSERLAIAFGLLNTPP 814
+++ ++ YL++L + MR+ GYVPDTS VLHDV+ D KE ML HSE++A+AFGL+ PP
Sbjct: 678 EAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPP 737
Query: 815 GTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
GTTIR+ KNLR C DCH +F+S +V R+IILRD +RFHHFRNG CSCG++W
Sbjct: 738 GTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 142/595 (23%), Positives = 234/595 (39%), Gaps = 130/595 (21%)
Query: 87 LNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISD----------- 135
L L + +HG++ FG+ + + N L+++Y K +L A +FD IS+
Sbjct: 30 LQLARAVHGNIITFGFQPRA-HILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 136 ----------------------RDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
RD V +N+MI P +
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKL----------- 221
FT S+ + + D Q HA ++G + T +NALV++Y+K
Sbjct: 149 FTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSAR 208
Query: 222 ------------------------GRIDEAKALF-GLFDDKDLVSWNTVISSLSQNDRFE 256
G D + L G+ D+ LV++N +IS ++
Sbjct: 209 KVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQ 268
Query: 257 EALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDL---IDNSFVG 313
EAL + M+ SG+ D T S + AC+ +L+ GK++H Y LR D DNS
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNS--- 325
Query: 314 SALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGY---------------------- 351
LV +Y C K D+ R +F+ + + + WNA+++GY
Sbjct: 326 --LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL 383
Query: 352 ---------ARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGY 402
A N F +E +KLF M E F P S + +C A+ + + H
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREG-FEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 403 VVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDA 462
++K GF+ NAL+ MY++ G +E ++ +F +M D VSWN +I G +A
Sbjct: 443 LLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEA 502
Query: 463 LNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLAT 522
+ D YE+ ++P+ +TL+TVL C + Y +
Sbjct: 503 V-----------DVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK---YFDSMETVY 548
Query: 523 DIAVG----SALIDMYAKCGCLNLSRIVFDQMPTRNVI-TWNVLIMAYGMHGKGE 572
I G + LID+ + G + + V + +P + W L+ +HG E
Sbjct: 549 RIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNME 603
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 198/480 (41%), Gaps = 88/480 (18%)
Query: 55 AISTYANMVAAGVPPDNFAFPAVLKAAAGV-NDLNLGKQIHGHVFKFGYASTSVAVANSL 113
AI+ + M G PDNF F +VL A V +D Q H K G A +V+N+L
Sbjct: 132 AINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSG-AGYITSVSNAL 190
Query: 114 VNMYGKCGD----LAGAHHVFDRISDRDHVSW---------------------------- 141
V++Y KC L A VFD I ++D SW
Sbjct: 191 VSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMK 250
Query: 142 ----NSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVH 197
N+MI+ ++ FT S+ AC+ L LGKQVH
Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACAT-AGLLQLGKQVH 309
Query: 198 AYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTV------------ 245
AY R D+ +N+LV++Y K G+ DEA+A+F KDLVSWN +
Sbjct: 310 AYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGE 369
Query: 246 -------------------ISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH 286
IS L++N EE L M + G P + A+ +C+
Sbjct: 370 AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAV 429
Query: 287 LEMLRTGKEIHGYALRNTDLIDNSF-VGSALVDMYCNCKKADKGRWVFDGILRRTVAVWN 345
L G++ H L+ D+S G+AL+ MY C ++ R VF + WN
Sbjct: 430 LGAYCNGQQYHAQLLKIG--FDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWN 487
Query: 346 AMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRC-------KAFLDKEG 398
A+IA ++ EA+ ++ EM+ + P+ TL ++L AC K F E
Sbjct: 488 ALIAALGQHGHGAEAVDVYEEML-KKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMET 546
Query: 399 IHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVS-WNTMITGYVVCG 457
+ Y + G D Y + L+D+ R G+ ++S+ S+ + W +++G V G
Sbjct: 547 V--YRIPPG--ADHYAR--LIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG 600
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 149/332 (44%), Gaps = 36/332 (10%)
Query: 52 FLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVAN 111
+ +A+ MV++G+ D F +P+V++A A L LGKQ+H +V + S N
Sbjct: 267 YQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR--REDFSFHFDN 324
Query: 112 SLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNV-- 169
SLV++Y KCG A +F+++ +D VSWN++++ N+
Sbjct: 325 SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS 384
Query: 170 -----------------------------DPTSFTLVSIAHACSNLRDGLSLGKQVHAYT 200
+P + +C+ L G+Q HA
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVL-GAYCNGQQYHAQL 443
Query: 201 FRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEAL 259
+ G D NAL+TMYAK G ++EA+ +F D VSWN +I++L Q+ EA+
Sbjct: 444 LKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAV 503
Query: 260 LFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDM 319
ML+ G+RPD +TL + L ACSH ++ G++ + + + L+D+
Sbjct: 504 DVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDL 563
Query: 320 YCNCKKADKGRWVFDGI-LRRTVAVWNAMIAG 350
C K V + + + T +W A+++G
Sbjct: 564 LCRSGKFSDAESVIESLPFKPTAEIWEALLSG 595
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W+ + A++ + + ++ M G P ++AF +K+ A + G+Q H +
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL 443
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
K G+ S S++ N+L+ MY KCG + A VF + D VSWN++IAA +
Sbjct: 444 LKIGFDS-SLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEA 502
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACSN 185
+ P TL+++ ACS+
Sbjct: 503 VDVYEEMLKKGIRPDRITLLTVLTACSH 530
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 249/751 (33%), Positives = 405/751 (53%), Gaps = 38/751 (5%)
Query: 126 AHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSN 185
A +FD ++ D WN MI V +FT + + +
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 186 LRDGLSLGKQVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNT 244
+ L GK++HA + G + N+L+++Y KLG +A+ +F ++D+VSWN+
Sbjct: 143 I-SSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNS 201
Query: 245 VISS-LSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRN 303
+IS L+ D F +LF ML+ G +PD + SAL ACSH+ + GKEIH +A+R+
Sbjct: 202 MISGYLALGDGFSSLMLF-KEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRS 260
Query: 304 TDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKL 363
+ V ++++DMY + +F+G+++R + WN MI YARN +A
Sbjct: 261 RIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLC 320
Query: 364 FIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYS 423
F +M ++ P+ T +LLPA A L+ IHGY ++RGF ++ AL+DMY
Sbjct: 321 FQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYG 376
Query: 424 RMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESI 483
G+++ ++ IF M ++++SWN++I YV G++ AL L ++ D S
Sbjct: 377 ECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW---------DSS- 426
Query: 484 PLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLS 543
L P+S T+ ++LP EIHAY +K + ++ + ++L+ MYA CG L +
Sbjct: 427 -LVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDA 485
Query: 544 RIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFA 603
R F+ + ++V++WN +IMAY +HG G ++ LF M+A + + PN+ T+ ++ A
Sbjct: 486 RKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASR-----VNPNKSTFASLLA 540
Query: 604 ACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKK 663
ACS SGMVDEG F +MK +GI+P +HY C++DL+GR+G A + ++ MP +
Sbjct: 541 ACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPF-VPT 599
Query: 664 VDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKK 723
W SLL A + H+++ + E AA+Q+ +E + YVLL N+Y+ AG W+ I+
Sbjct: 600 ARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLL 659
Query: 724 MKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCV 783
M+ G+ + S +E + + H F GD SH + +++E L+ ++ RM V +
Sbjct: 660 MESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLD-VVSRM-----VGEEDIY 713
Query: 784 LHDVDDEEKETMLCG-------HSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKF 836
+H V ET++ HS RLA FGL++T G + V N R+C CH +
Sbjct: 714 VHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEK 773
Query: 837 ISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
S++ REI++ D + FHHF NG CSCG+YW
Sbjct: 774 ASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 248 bits (632), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/507 (29%), Positives = 263/507 (51%), Gaps = 29/507 (5%)
Query: 52 FLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVAN 111
+++A+ Y+ MV AGV D F +P V+K+ AG++ L GK+IH V K G+ S V V N
Sbjct: 111 YIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVS-DVYVCN 169
Query: 112 SLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDP 171
SL+++Y K G A VF+ + +RD VSWNSMI+ P
Sbjct: 170 SLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKP 229
Query: 172 TSFTLVSIAHACSNLRDGLSLGKQVHAYTFRN----GDWRTFTNNALVTMYAKLGRIDEA 227
F+ +S ACS++ +GK++H + R+ GD T +++ MY+K G + A
Sbjct: 230 DRFSTMSALGACSHVYSP-KMGKEIHCHAVRSRIETGDVMVMT--SILDMYSKYGEVSYA 286
Query: 228 KALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHML-QSGVRPDGVTLASALPACSH 286
+ +F +++V+WN +I ++N R +A L M Q+G++PD +T + LPA +
Sbjct: 287 ERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAI 346
Query: 287 LEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNA 346
LE G+ IHGYA+R + + + +AL+DMY C + +FD + + V WN+
Sbjct: 347 LE----GRTIHGYAMRR-GFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNS 401
Query: 347 MIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKR 406
+IA Y +N + A++LF E+ ++S P+STT++S+LPA + + IH Y+VK
Sbjct: 402 IIAAYVQNGKNYSALELFQEL-WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKS 460
Query: 407 GFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLL 466
+ + + N+L+ MY+ G +E ++ F + +D+VSWN++I Y V G ++ L
Sbjct: 461 RYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLF 520
Query: 467 HDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAV 526
+M + + PN T ++L C E + ++K++ D +
Sbjct: 521 SEMIASR-----------VNPNKSTFASLLAACSISGMVDEGWE-YFESMKREYGIDPGI 568
Query: 527 G--SALIDMYAKCGCLNLSRIVFDQMP 551
++D+ + G + ++ ++MP
Sbjct: 569 EHYGCMLDLIGRTGNFSAAKRFLEEMP 595
Score = 190 bits (482), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 152/559 (27%), Positives = 262/559 (46%), Gaps = 44/559 (7%)
Query: 186 LRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTV 245
LRD + KQV+ R F ++ L +++A LF + D WN +
Sbjct: 52 LRDRYKVTKQVNDPALTRA-LRGFADSRL---------MEDALQLFDEMNKADAFLWNVM 101
Query: 246 ISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTD 305
I + + EA+ F M+ +GV+ D T + + + + L GK+IH ++
Sbjct: 102 IKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIK-LG 160
Query: 306 LIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFI 365
+ + +V ++L+ +Y A VF+ + R + WN+MI+GY ++ LF
Sbjct: 161 FVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFK 220
Query: 366 EMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEK-DKYVQNALMDMYSR 424
EM+ + F P+ + S L AC + + IH + V+ E D V +++DMYS+
Sbjct: 221 EML-KCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSK 279
Query: 425 MGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIP 484
G + ++ IF M +R+IV+WN MI Y GR DA M E
Sbjct: 280 YGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS----------EQNG 329
Query: 485 LKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSR 544
L+P+ +T + +LP IH YA+++ + + +ALIDMY +CG L +
Sbjct: 330 LQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAE 385
Query: 545 IVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAA 604
++FD+M +NVI+WN +I AY +GK ALELF+ + + + P+ T +I A
Sbjct: 386 VIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW-----DSSLVPDSTTIASILPA 440
Query: 605 CSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKV 664
+ S + EG + H ++ LV + G +E+A K + +K V
Sbjct: 441 YAESLSLSEGREI-HAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL--LKDV 497
Query: 665 DAWSSLLGACKIHQNLEVGEIAAKQLLV--LEPNVASHYVLLSNIYSSAGLWDQAMDIRK 722
+W+S++ A +H + +++ + PN ++ LL+ S +G+ D+ + +
Sbjct: 498 VSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC-SISGMVDEGWEYFE 556
Query: 723 KMK-EMGVRKEPGCSWIEH 740
MK E G+ +PG IEH
Sbjct: 557 SMKREYGI--DPG---IEH 570
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 1/147 (0%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W + Q+ A+ + + + + PD+ ++L A A L+ G++IH ++
Sbjct: 398 SWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYI 457
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
K Y S ++ + NSLV+MY CGDL A F+ I +D VSWNS+I A
Sbjct: 458 VKSRYWSNTI-ILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRIS 516
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACS 184
V+P T S+ ACS
Sbjct: 517 VWLFSEMIASRVNPNKSTFASLLAACS 543
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 438 bits (1126), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/690 (35%), Positives = 367/690 (53%), Gaps = 50/690 (7%)
Query: 209 FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQS 268
F+ N L+ Y+K G I E ++ F D+D V+WN +I S + A+ M++
Sbjct: 73 FSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD 132
Query: 269 -GVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKAD 327
VTL + L S + GK+IHG ++ VGS L+ MY N
Sbjct: 133 FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIK-LGFESYLLVGSPLLYMYANVGCIS 191
Query: 328 KGRWVFDGILRRTVAV------------------------------WNAMIAGYARNEFD 357
+ VF G+ R + W AMI G A+N
Sbjct: 192 DAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLA 251
Query: 358 DEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNA 417
EAI+ F EM + + S+LPAC A + + IH +++ F+ YV +A
Sbjct: 252 KEAIECFREMKVQG-LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSA 310
Query: 418 LMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEY 477
L+DMY + + +K++F M ++++VSW M+ GY GR ++A+ + DMQR D
Sbjct: 311 LIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID-- 368
Query: 478 EDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKC 537
P+ TL + C + H A+ L + V ++L+ +Y KC
Sbjct: 369 ---------PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC 419
Query: 538 GCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVT 597
G ++ S +F++M R+ ++W ++ AY G+ E ++LF +MV ++P+ VT
Sbjct: 420 GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG-----LKPDGVT 474
Query: 598 YIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTM 657
+ +ACS +G+V++G F M + +GI PS HY+C++DL RSGR+EEA + I M
Sbjct: 475 LTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM 534
Query: 658 PSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQA 717
P + W++LL AC+ NLE+G+ AA+ L+ L+P+ + Y LLS+IY+S G WD
Sbjct: 535 PFPPDAI-GWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSV 593
Query: 718 MDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYV 777
+R+ M+E V+KEPG SWI+ + ++H F A D S P +++ LE L ++ GY
Sbjct: 594 AQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYK 653
Query: 778 PDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFI 837
PDTS V HDV++ K ML HSERLAIAFGL+ P G IRV KNLRVC DCH ATK I
Sbjct: 654 PDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHI 713
Query: 838 SKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
S + REI++RD RFH F++GTCSCGD+W
Sbjct: 714 SSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 195 bits (496), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 144/541 (26%), Positives = 236/541 (43%), Gaps = 55/541 (10%)
Query: 59 YANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYG 118
+ N++ A P+ F + ++ A A + +++ + ++ N+L+ Y
Sbjct: 29 HGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRI-----PQPNLFSWNNLLLAYS 83
Query: 119 KCGDLAGAHHVFDRISDRDHVSWNSMIAA-ACRFXXXXXXXXXXXXXXXXNVDPTSFTLV 177
K G ++ F+++ DRD V+WN +I + + + T TL+
Sbjct: 84 KAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLM 143
Query: 178 SIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDD 236
++ S+ +SLGKQ+H + G + + L+ MYA +G I +AK +F DD
Sbjct: 144 TMLKLSSS-NGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDD 202
Query: 237 ------------------------------KDLVSWNTVISSLSQNDRFEEALLFLYHML 266
KD VSW +I L+QN +EA+ M
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 267 QSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKA 326
G++ D S LPAC L + GK+IH +R T+ D+ +VGSAL+DMYC CK
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIR-TNFQDHIYVGSALIDMYCKCKCL 321
Query: 327 DKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPA 386
+ VFD + ++ V W AM+ GY + +EA+K+F++M S P+ TL + A
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDM-QRSGIDPDHYTLGQAISA 380
Query: 387 CVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSW 446
C + + HG + G V N+L+ +Y + G I+ S +F M+ RD VSW
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 447 NTMITGYVVCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXX 505
M++ Y GR + + L M Q G LKP+ VTL V+ C
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHG------------LKPDGVTLTGVISACSRAGLV 488
Query: 506 XXXXEIHAYALKQ-KLATDIAVGSALIDMYAKCGCLNLSRIVFDQMP-TRNVITWNVLIM 563
+ + I S +ID++++ G L + + MP + I W L+
Sbjct: 489 EKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Query: 564 A 564
A
Sbjct: 549 A 549
Score = 160 bits (405), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 188/398 (47%), Gaps = 33/398 (8%)
Query: 299 YALRNTDLID--NSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEF 356
YA R D I N F + L+ Y + F+ + R WN +I GY+ +
Sbjct: 59 YARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGL 118
Query: 357 DDEAIKLFIEMVYESDFTPNST--TLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYV 414
A+K + M+ DF+ N T TL ++L + IHG V+K GFE V
Sbjct: 119 VGAAVKAYNTMM--RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLV 176
Query: 415 QNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDM----- 469
+ L+ MY+ +G I +K +F +D R+ V +N+++ G + CG +DAL L M
Sbjct: 177 GSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV 236
Query: 470 ----------QRGQDDE----YEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYA 515
Q G E + + + LK + +VLP C +IHA
Sbjct: 237 SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI 296
Query: 516 LKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEAL 575
++ I VGSALIDMY KC CL+ ++ VFD+M +NV++W +++ YG G+ EEA+
Sbjct: 297 IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAV 356
Query: 576 ELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYA 635
++F M I P+ T +AC++ ++EG + FH G+
Sbjct: 357 KIFLDM-----QRSGIDPDHYTLGQAISACANVSSLEEG-SQFHGKAITSGLIHYVTVSN 410
Query: 636 CLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGA 673
LV L G+ G ++++ +L M N++ +W++++ A
Sbjct: 411 SLVTLYGKCGDIDDSTRLFNEM--NVRDAVSWTAMVSA 446
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 168/360 (46%), Gaps = 7/360 (1%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W ++ AQ+ +AI + M G+ D + F +VL A G+ +N GKQIH +
Sbjct: 237 SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI 296
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
+ + + V ++L++MY KC L A VFDR+ ++ VSW +M+ +
Sbjct: 297 IRTNFQD-HIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEA 355
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFT-NNALVT 216
+DP +TL AC+N+ L G Q H +G T +N+LVT
Sbjct: 356 VKIFLDMQRSGIDPDHYTLGQAISACANV-SSLEEGSQFHGKAITSGLIHYVTVSNSLVT 414
Query: 217 MYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVT 276
+Y K G ID++ LF + +D VSW ++S+ +Q R E + M+Q G++PDGVT
Sbjct: 415 LYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVT 474
Query: 277 LASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI 336
L + ACS ++ G+ ++ + S ++D++ + ++ +G+
Sbjct: 475 LTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM 534
Query: 337 LRRTVAV-WNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLD 395
A+ W +++ RN+ + E K E + E D P+ +LL + K D
Sbjct: 535 PFPPDAIGWTTLLSA-CRNKGNLEIGKWAAESLIELD--PHHPAGYTLLSSIYASKGKWD 591
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/580 (37%), Positives = 349/580 (60%), Gaps = 20/580 (3%)
Query: 281 LPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRT 340
L C+ ++L G+ +H + L++ + +G+ L++MY C ++ R VF+ + +R
Sbjct: 67 LKKCTVFKLLIQGRIVHAHILQSI-FRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRD 125
Query: 341 VAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIH 400
W +I+GY++++ +A+ F +M+ ++PN TLSS++ A + +H
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQML-RFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 401 GYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHD 460
G+ VK GF+ + +V +AL+D+Y+R G ++ ++ +F +++ R+ VSWN +I G+ +
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 461 DALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKL 520
AL L M R +P+ + ++ C +HAY +K
Sbjct: 245 KALELFQGMLRDG-----------FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293
Query: 521 ATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRR 580
G+ L+DMYAK G ++ +R +FD++ R+V++WN L+ AY HG G+EA+ F
Sbjct: 294 KLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEE 353
Query: 581 MVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDL 640
M IRPNE++++++ ACSHSG++DEG + + MK + GI P + HY +VDL
Sbjct: 354 M-----RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDL 407
Query: 641 LGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASH 700
LGR+G + A + I+ MP W +LL AC++H+N E+G AA+ + L+P+
Sbjct: 408 LGRAGDLNRALRFIEEMPIE-PTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGP 466
Query: 701 YVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKEL 760
+V+L NIY+S G W+ A +RKKMKE GV+KEP CSW+E + +H F+A D HPQ +E+
Sbjct: 467 HVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEI 526
Query: 761 HEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRV 820
E +L ++++ GYVPDTS V+ VD +E+E L HSE++A+AF LLNTPPG+TI +
Sbjct: 527 ARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHI 586
Query: 821 TKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGT 860
KN+RVC DCH A K SK+V REII+RD RFHHF++ +
Sbjct: 587 KKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDAS 626
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 192/385 (49%), Gaps = 21/385 (5%)
Query: 193 GKQVHAYT----FRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISS 248
G+ VHA+ FR+ N L+ MYAK G ++EA+ +F +D V+W T+IS
Sbjct: 79 GRIVHAHILQSIFRHD---IVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135
Query: 249 LSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLID 308
SQ+DR +ALLF ML+ G P+ TL+S + A + G ++HG+ ++
Sbjct: 136 YSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVK-CGFDS 194
Query: 309 NSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMV 368
N VGSAL+D+Y D + VFD + R WNA+IAG+AR ++A++LF M+
Sbjct: 195 NVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGML 254
Query: 369 YESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI 428
+ F P+ + +SL AC + +H Y++K G + + N L+DMY++ G I
Sbjct: 255 RDG-FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSI 313
Query: 429 EISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPN 488
++ IF + +RD+VSWN+++T Y G +A+ +M+R + ++PN
Sbjct: 314 HDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR-----------VGIRPN 362
Query: 489 SVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFD 548
++ ++VL C + K + + ++D+ + G LN + +
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422
Query: 549 QMPTR-NVITWNVLIMAYGMHGKGE 572
+MP W L+ A MH E
Sbjct: 423 EMPIEPTAAIWKALLNACRMHKNTE 447
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 175/363 (48%), Gaps = 9/363 (2%)
Query: 67 VPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGA 126
+P D + +LK L G+ +H H+ + + + + N+L+NMY KCG L A
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIF-RHDIVMGNTLLNMYAKCGSLEEA 114
Query: 127 HHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNL 186
VF+++ RD V+W ++I+ + P FTL S+ A +
Sbjct: 115 RKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAE 174
Query: 187 RDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTV 245
R G G Q+H + + G D +AL+ +Y + G +D+A+ +F + ++ VSWN +
Sbjct: 175 RRG-CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 246 ISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTD 305
I+ ++ E+AL ML+ G RP + AS ACS L GK +H Y +++ +
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293
Query: 306 LIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFI 365
+ +F G+ L+DMY R +FD + +R V WN+++ YA++ F EA+ F
Sbjct: 294 KL-VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFE 352
Query: 366 EMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVV--KRGFEKDKYVQNALMDMYS 423
EM PN + S+L AC LD EG H Y + K G + + ++D+
Sbjct: 353 EM-RRVGIRPNEISFLSVLTACSH-SGLLD-EGWHYYELMKKDGIVPEAWHYVTVVDLLG 409
Query: 424 RMG 426
R G
Sbjct: 410 RAG 412
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 179/366 (48%), Gaps = 23/366 (6%)
Query: 370 ESDFTP-NSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI 428
E + P + ++LL C K + +H ++++ F D + N L++MY++ G +
Sbjct: 52 EGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSL 111
Query: 429 EISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPN 488
E ++ +F M +RD V+W T+I+GY R DAL + M R PN
Sbjct: 112 EEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLR-----------FGYSPN 160
Query: 489 SVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFD 548
TL +V+ ++H + +K +++ VGSAL+D+Y + G ++ +++VFD
Sbjct: 161 EFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFD 220
Query: 549 QMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHS 608
+ +RN ++WN LI + E+ALELF+ M+ + RP+ +Y ++F ACS +
Sbjct: 221 ALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG-----FRPSHFSYASLFGACSST 275
Query: 609 GMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWS 668
G +++G H G + + L+D+ +SG + +A K+ + + V +W+
Sbjct: 276 GFLEQG-KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAK--RDVVSWN 332
Query: 669 SLLGACKIH--QNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKE 726
SLL A H V + + + PN S +L+ S +GL D+ + MK+
Sbjct: 333 SLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTAC-SHSGLLDEGWHYYELMKK 391
Query: 727 MGVRKE 732
G+ E
Sbjct: 392 DGIVPE 397
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 158/313 (50%), Gaps = 7/313 (2%)
Query: 39 WIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVF 98
W + +Q A+ + M+ G P+ F +V+KAAA G Q+HG
Sbjct: 129 WTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCV 188
Query: 99 KFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXX 158
K G+ S +V V ++L+++Y + G + A VFD + R+ VSWN++IA R
Sbjct: 189 KCGFDS-NVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKAL 247
Query: 159 XXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGD-WRTFTNNALVTM 217
P+ F+ S+ ACS+ L GK VHAY ++G+ F N L+ M
Sbjct: 248 ELFQGMLRDGFRPSHFSYASLFGACSST-GFLEQGKWVHAYMIKSGEKLVAFAGNTLLDM 306
Query: 218 YAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTL 277
YAK G I +A+ +F +D+VSWN+++++ +Q+ +EA+ + M + G+RP+ ++
Sbjct: 307 YAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISF 366
Query: 278 ASALPACSHLEMLRTGKEIHGYALRNTD-LIDNSFVGSALVDMYCNCKKADKG-RWVFDG 335
S L ACSH +L G H Y L D ++ ++ +VD+ ++ R++ +
Sbjct: 367 LSVLTACSHSGLLDEG--WHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEM 424
Query: 336 ILRRTVAVWNAMI 348
+ T A+W A++
Sbjct: 425 PIEPTAAIWKALL 437
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/578 (38%), Positives = 339/578 (58%), Gaps = 20/578 (3%)
Query: 294 KEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRW---VFDGILRR-TVAVWNAMIA 349
++IH +++R+ I ++ +G L+ + + VF I + V +WN +I
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 350 GYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFE 409
GYA A L+ EM P++ T L+ A E IH V++ GF
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 410 KDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDM 469
YVQN+L+ +Y+ G + + +F M +D+V+WN++I G+ G+ ++AL L +M
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 470 QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSA 529
S +KP+ T++++L C +H Y +K L ++ +
Sbjct: 214 N-----------SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 262
Query: 530 LIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNK 589
L+D+YA+CG + ++ +FD+M +N ++W LI+ ++G G+EA+ELF+ M +S +
Sbjct: 263 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM----ESTE 318
Query: 590 EIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEE 649
+ P E+T++ I ACSH GMV EG F M+ + IEP +H+ C+VDLL R+G+V++
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 378
Query: 650 AYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYS 709
AY+ IK+MP V W +LLGAC +H + ++ E A Q+L LEPN + YVLLSN+Y+
Sbjct: 379 AYEYIKSMPMQ-PNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYA 437
Query: 710 SAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQ 769
S W IRK+M GV+K PG S +E + VH+FL GD SHPQS ++ L+ +
Sbjct: 438 SEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTG 497
Query: 770 RMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCND 829
R+R EGYVP S V DV++EEKE + HSE++AIAF L++TP + I V KNLRVC D
Sbjct: 498 RLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCAD 557
Query: 830 CHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
CH+A K +SK+ +REI++RD RFHHF+NG+CSC DYW
Sbjct: 558 CHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 160 bits (404), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 142/260 (54%), Gaps = 5/260 (1%)
Query: 39 WIDHLRLQAQSSSFLQAISTYANMVAAG-VPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
W +R A+ + + A S Y M +G V PD +P ++KA + D+ LG+ IH V
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
+ G+ S + V NSL+++Y CGD+A A+ VFD++ ++D V+WNS+I
Sbjct: 148 IRSGFGSL-IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 206
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTF-TNNALVT 216
+ P FT+VS+ AC+ + L+LGK+VH Y + G R ++N L+
Sbjct: 207 LALYTEMNSKGIKPDGFTIVSLLSACAKI-GALTLGKRVHVYMIKVGLTRNLHSSNVLLD 265
Query: 217 MYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEAL-LFLYHMLQSGVRPDGV 275
+YA+ GR++EAK LF DK+ VSW ++I L+ N +EA+ LF Y G+ P +
Sbjct: 266 LYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEI 325
Query: 276 TLASALPACSHLEMLRTGKE 295
T L ACSH M++ G E
Sbjct: 326 TFVGILYACSHCGMVKEGFE 345
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 185/390 (47%), Gaps = 14/390 (3%)
Query: 83 GVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGD---LAGAHHVFDRISDRDHV 139
GV+ + +QIH + G + + + L+ ++ AH VF +I +V
Sbjct: 26 GVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINV 85
Query: 140 -SWNSMIAAACRFXXXXXXXXXXXXXXXXN-VDPTSFTLVSIAHACSNLRDGLSLGKQVH 197
WN++I V+P + T + A + + D + LG+ +H
Sbjct: 86 FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMAD-VRLGETIH 144
Query: 198 AYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFE 256
+ R+G + N+L+ +YA G + A +F +KDLV+WN+VI+ ++N + E
Sbjct: 145 SVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPE 204
Query: 257 EALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSAL 316
EAL M G++PDG T+ S L AC+ + L GK +H Y ++ L N + L
Sbjct: 205 EALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VGLTRNLHSSNVL 263
Query: 317 VDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPN 376
+D+Y C + ++ + +FD ++ + W ++I G A N F EAI+LF M P
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 323
Query: 377 STTLSSLLPACVRCKAFLDKEGIHGY-VVKRGFEKDKYVQN--ALMDMYSRMGRIEISKS 433
T +L AC C + KEG + ++ ++ + +++ ++D+ +R G+++ +
Sbjct: 324 EITFVGILYACSHCG--MVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYE 381
Query: 434 IFGSMDRR-DIVSWNTMITGYVVCGRHDDA 462
SM + ++V W T++ V G D A
Sbjct: 382 YIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 105/217 (48%), Gaps = 10/217 (4%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
AW + A++ +A++ Y M + G+ PD F ++L A A + L LGK++H ++
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAA-ACRFXXXXX 156
K G + ++ +N L+++Y +CG + A +FD + D++ VSW S+I A
Sbjct: 249 IKVGL-TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 157 XXXXXXXXXXXNVDPTSFTLVSIAHACSN---LRDGLSLGKQV-HAYTFRNGDWRTFTNN 212
+ P T V I +ACS+ +++G +++ Y + R
Sbjct: 308 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKI---EPRIEHFG 364
Query: 213 ALVTMYAKLGRIDEA-KALFGLFDDKDLVSWNTVISS 248
+V + A+ G++ +A + + + ++V W T++ +
Sbjct: 365 CMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGA 401
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 433 bits (1113), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/588 (37%), Positives = 350/588 (59%), Gaps = 21/588 (3%)
Query: 281 LPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRT 340
L C+ + K HG +R DL + + + L++ Y C + R VFDG+L R+
Sbjct: 68 LQLCARNGAVMEAKACHGKIIR-IDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 341 VAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC-VRCKAFLDKEGI 399
+ WN MI Y RN + EA+ +F+EM E F + T+SS+L AC V C A L+ + +
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEG-FKFSEFTISSVLSACGVNCDA-LECKKL 184
Query: 400 HGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRH 459
H VK + + YV AL+D+Y++ G I+ + +F SM + V+W++M+ GYV +
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY 244
Query: 460 DDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQK 519
++AL L QR + L+ N TL +V+ C ++HA K
Sbjct: 245 EEALLLYRRAQR-----------MSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSG 293
Query: 520 LATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFR 579
+++ V S+ +DMYAKCG L S I+F ++ +N+ WN +I + H + +E + LF
Sbjct: 294 FGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFE 353
Query: 580 RMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVD 639
+M ++D + PNEVT+ ++ + C H+G+V+EG F M+ +G+ P+ HY+C+VD
Sbjct: 354 KM--QQDG---MHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVD 408
Query: 640 LLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVAS 699
+LGR+G + EAY+LIK++P + W SLL +C++++NLE+ E+AA++L LEP A
Sbjct: 409 ILGRAGLLSEAYELIKSIPFD-PTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAG 467
Query: 700 HYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKE 759
++VLLSNIY++ W++ RK +++ V+K G SWI+ +D+VH F G++ HP+ +E
Sbjct: 468 NHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIRE 527
Query: 760 LHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIR 819
+ L+NL+ + RK GY P LHDV+ +KE +L HSE+LA+ FGL+ P + +R
Sbjct: 528 ICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVR 587
Query: 820 VTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
+ KNLR+C DCH K S R II+RDV RFHHF +G CSCGD+W
Sbjct: 588 IMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 149 bits (377), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 162/351 (46%), Gaps = 13/351 (3%)
Query: 46 QAQSSSFLQAISTYANMVAAGVPPDNFA--------FPAVLKAAAGVNDLNLGKQIHGHV 97
++ +SS + IS A+ V P ++ +L+ A + K HG +
Sbjct: 28 RSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKI 87
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
+ V + N L+N Y KCG + A VFD + +R VSWN+MI R
Sbjct: 88 IRIDLEG-DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEA 146
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVT 216
+ FT+ S+ AC D L K++H + + D + AL+
Sbjct: 147 LDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC-KKLHCLSVKTCIDLNLYVGTALLD 205
Query: 217 MYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVT 276
+YAK G I +A +F DK V+W+++++ QN +EEALL + + + T
Sbjct: 206 LYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFT 265
Query: 277 LASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI 336
L+S + ACS+L L GK++H + + N FV S+ VDMY C + +F +
Sbjct: 266 LSSVICACSNLAALIEGKQMHAVICK-SGFGSNVFVASSAVDMYAKCGSLRESYIIFSEV 324
Query: 337 LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
+ + +WN +I+G+A++ E + LF E + + PN T SSLL C
Sbjct: 325 QEKNLELWNTIISGFAKHARPKEVMILF-EKMQQDGMHPNEVTFSSLLSVC 374
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 174/359 (48%), Gaps = 23/359 (6%)
Query: 369 YESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI 428
Y ++F+ N + +L C R A ++ + HG +++ E D + N L++ YS+ G +
Sbjct: 54 YSNEFS-NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFV 112
Query: 429 EISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPN 488
E+++ +F M R +VSWNTMI Y +AL++ +M+ K +
Sbjct: 113 ELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNE-----------GFKFS 161
Query: 489 SVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFD 548
T+ +VL C ++H ++K + ++ VG+AL+D+YAKCG + + VF+
Sbjct: 162 EFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFE 221
Query: 549 QMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHS 608
M ++ +TW+ ++ Y + EEAL L+RR A++ S + N+ T ++ ACS+
Sbjct: 222 SMQDKSSVTWSSMVAGYVQNKNYEEALLLYRR--AQRMS---LEQNQFTLSSVICACSNL 276
Query: 609 GMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWS 668
+ EG + H + G + + VD+ + G + E+Y + + K ++ W+
Sbjct: 277 AALIEGKQM-HAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQE--KNLELWN 333
Query: 669 SLLGACKIHQNLEVGEIAAKQLLV--LEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMK 725
+++ H + I +++ + PN + LLS + GL ++ K M+
Sbjct: 334 TIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLS-VCGHTGLVEEGRRFFKLMR 391
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/679 (34%), Positives = 360/679 (53%), Gaps = 63/679 (9%)
Query: 234 FDDKDLVSWN-----TVISSLSQNDRFEEALLFL---------YHMLQSGVRPDGVTLAS 279
F DK + N V+ L + +RF EA+ L +L +P T +
Sbjct: 31 FSDKKFFNPNHEDGGVVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCN 90
Query: 280 ALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRR 339
+ CS L GK++H + +R + + + + L+ MY C R VFD + R
Sbjct: 91 LIQVCSQTRALEEGKKVHEH-IRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNR 149
Query: 340 TVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFT------------------------- 374
+ WN M+ GYA +EA KLF EM + ++
Sbjct: 150 DLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQ 209
Query: 375 ------PNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI 428
PN T+S + A K + IHG++V+ G + D+ + ++LMDMY + G I
Sbjct: 210 RVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCI 269
Query: 429 EISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPN 488
+ +++IF + +D+VSW +MI Y R + +L ++ + +PN
Sbjct: 270 DEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCE-----------RPN 318
Query: 489 SVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFD 548
T VL C ++H Y + S+L+DMY KCG + ++ V D
Sbjct: 319 EYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVD 378
Query: 549 QMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHS 608
P ++++W LI +G+ +EAL+ F ++ +P+ VT++ + +AC+H+
Sbjct: 379 GCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSG-----TKPDHVTFVNVLSACTHA 433
Query: 609 GMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWS 668
G+V++GL F+++ H + +SDHY CLVDLL RSGR E+ +I MP K W+
Sbjct: 434 GLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKF-LWA 492
Query: 669 SLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMG 728
S+LG C + N+++ E AA++L +EP YV ++NIY++AG W++ +RK+M+E+G
Sbjct: 493 SVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIG 552
Query: 729 VRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVD 788
V K PG SW E + + H F+A D SHP ++ E+L L ++M++EGYVP TS VLHDV+
Sbjct: 553 VTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVE 612
Query: 789 DEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILR 848
DE+KE L HSE+LA+AF +L+T GT I+V KNLR C DCH A KFIS I R+I +R
Sbjct: 613 DEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVR 672
Query: 849 DVRRFHHFRNGTCSCGDYW 867
D RFH F NG CSCGDYW
Sbjct: 673 DSTRFHCFENGQCSCGDYW 691
Score = 160 bits (406), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 201/411 (48%), Gaps = 34/411 (8%)
Query: 212 NALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQ--SG 269
N +V YA++G ++EA+ LF +KD SW +++ + D+ EEAL+ LY ++Q
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALV-LYSLMQRVPN 213
Query: 270 VRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKG 329
RP+ T++ A+ A + ++ +R GKEIHG+ +R L + + S+L+DMY C D+
Sbjct: 214 SRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVR-AGLDSDEVLWSSLMDMYGKCGCIDEA 272
Query: 330 RWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVR 389
R +FD I+ + V W +MI Y ++ E LF E+V + PN T + +L AC
Sbjct: 273 RNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCE-RPNEYTFAGVLNACAD 331
Query: 390 CKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTM 449
+ +HGY+ + GF+ + ++L+DMY++ G IE +K + + D+VSW ++
Sbjct: 332 LTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSL 391
Query: 450 ITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXX 509
I G G+ D+AL + + KP+ VT + VL C
Sbjct: 392 IGGCAQNGQPDEALKYFDLLLKSGT-----------KPDHVTFVNVLSACTHAGLVEKGL 440
Query: 510 E-IHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR-NVITWNVLIMAYGM 567
E ++ K +L+ + L+D+ A+ G + V +MP + + W ++
Sbjct: 441 EFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCST 500
Query: 568 HGK----GEEALELFRRMVAEKDSNKEIRP-NEVTYIAIFAACSHSGMVDE 613
+G E A ELF+ I P N VTY+ + + +G +E
Sbjct: 501 YGNIDLAEEAAQELFK-----------IEPENPVTYVTMANIYAAAGKWEE 540
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 190/446 (42%), Gaps = 66/446 (14%)
Query: 65 AGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLA 124
A PP + + +++ + L GK++H H+ G+ + + N L+ MY KCG L
Sbjct: 80 AKKPPAS-TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVP-GIVIWNRLLRMYAKCGSLV 137
Query: 125 GAHHVFDRISDRD-------------------------------HVSWNSMIAAACRF-X 152
A VFD + +RD SW +M+ +
Sbjct: 138 DARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQ 197
Query: 153 XXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTN 211
N P FT VSIA A + + GK++H + R G D
Sbjct: 198 PEEALVLYSLMQRVPNSRPNIFT-VSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLW 256
Query: 212 NALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVR 271
++L+ MY K G IDEA+ +F +KD+VSW ++I ++ R+ E ++ S R
Sbjct: 257 SSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCER 316
Query: 272 PDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRW 331
P+ T A L AC+ L GK++HGY R SF S+LVDMY C + +
Sbjct: 317 PNEYTFAGVLNACADLTTEELGKQVHGYMTR-VGFDPYSFASSSLVDMYTKCGNIESAKH 375
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCK 391
V DG + + W ++I G A+N DEA+K F +++ +S P+ T ++L AC
Sbjct: 376 VVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYF-DLLLKSGTKPDHVTFVNVLSACT--- 431
Query: 392 AFLDKEGIHGYVVKRGFE--------------KDKYVQNALMDMYSRMGRIEISKSIFGS 437
H +V++G E D Y L+D+ +R GR E KS+
Sbjct: 432 --------HAGLVEKGLEFFYSITEKHRLSHTSDHYT--CLVDLLARSGRFEQLKSVISE 481
Query: 438 MDRR-DIVSWNTMITGYVVCGRHDDA 462
M + W +++ G G D A
Sbjct: 482 MPMKPSKFLWASVLGGCSTYGNIDLA 507
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 157/311 (50%), Gaps = 7/311 (2%)
Query: 69 PDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHH 128
P+ F + AAA V + GK+IHGH+ + G S V + +SL++MYGKCG + A +
Sbjct: 216 PNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV-LWSSLMDMYGKCGCIDEARN 274
Query: 129 VFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRD 188
+FD+I ++D VSW SMI + P +T + +AC++L
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTT 334
Query: 189 GLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVIS 247
LGKQVH Y R G D +F +++LV MY K G I+ AK + DLVSW ++I
Sbjct: 335 E-ELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIG 393
Query: 248 SLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLI 307
+QN + +EAL + +L+SG +PD VT + L AC+H ++ G E L
Sbjct: 394 GCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLS 453
Query: 308 DNSFVGSALVDMYCNCKKADKGRWVFDGI-LRRTVAVWNAMIAG---YARNEFDDEAIKL 363
S + LVD+ + ++ + V + ++ + +W +++ G Y + +EA +
Sbjct: 454 HTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQE 513
Query: 364 FIEMVYESDFT 374
++ E+ T
Sbjct: 514 LFKIEPENPVT 524
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 6/196 (3%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W + +SS + + S ++ +V + P+ + F VL A A + LGKQ+HG++
Sbjct: 286 SWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYM 345
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
+ G+ S A ++SLV+MY KCG++ A HV D D VSW S+I +
Sbjct: 346 TRVGFDPYSFA-SSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEA 404
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNN---AL 214
P T V++ AC++ GL Y+ + T++ L
Sbjct: 405 LKYFDLLLKSGTKPDHVTFVNVLSACTHA--GLVEKGLEFFYSITEKHRLSHTSDHYTCL 462
Query: 215 VTMYAKLGRIDEAKAL 230
V + A+ GR ++ K++
Sbjct: 463 VDLLARSGRFEQLKSV 478
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 248/747 (33%), Positives = 404/747 (54%), Gaps = 31/747 (4%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+ AW + + A++ Y NM GVP +FPA+LKA A + D+ G ++
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDR-DHVSWNSMIAAACRFX 152
H + K GY ST V N+LV+MY K DL+ A +FD ++ D V WNS++++
Sbjct: 205 HSLLVKLGYHSTGFIV-NALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSG 263
Query: 153 XXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLS---LGKQVHAYTFRNGDWRT- 208
P S+T+VS AC DG S LGK++HA ++ +
Sbjct: 264 KSLETLELFREMHMTGPAPNSYTIVSALTAC----DGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 209 -FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQ 267
+ NAL+ MY + G++ +A+ + ++ D+V+WN++I QN ++EAL F M+
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 379
Query: 268 SGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKAD 327
+G + D V++ S + A L L G E+H Y +++ N VG+ L+DMY C
Sbjct: 380 AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKH-GWDSNLQVGNTLIDMYSKCNLTC 438
Query: 328 KGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
F + + + W +IAGYA+N+ EA++LF + V + + L S+L A
Sbjct: 439 YMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRD-VAKKRMEIDEMILGSILRAS 497
Query: 388 VRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWN 447
K+ L + IH +++++G D +QN L+D+Y + + + +F S+ +D+VSW
Sbjct: 498 SVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWT 556
Query: 448 TMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXX 507
+MI+ + G +A+ L M L +SV L+ +L
Sbjct: 557 SMISSSALNGNESEAVELFRRMVE-----------TGLSADSVALLCILSAAASLSALNK 605
Query: 508 XXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGM 567
EIH Y L++ + ++ A++DMYA CG L ++ VFD++ + ++ + +I AYGM
Sbjct: 606 GREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGM 665
Query: 568 HGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGI 627
HG G+ A+ELF +M E + P+ ++++A+ ACSH+G++DEG M+ + +
Sbjct: 666 HGCGKAAVELFDKMRHEN-----VSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYEL 720
Query: 628 EPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAA 687
EP +HY CLVD+LGR+ V EA++ +K M + + W +LL AC+ H E+GEIAA
Sbjct: 721 EPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTE-PTAEVWCALLAACRSHSEKEIGEIAA 779
Query: 688 KQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKF 747
++LL LEP + VL+SN+++ G W+ +R KMK G+ K PGCSWIE +VHKF
Sbjct: 780 QRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKF 839
Query: 748 LAGDASHPQSKELHEYLENLLQRMRKE 774
A D SHP+SKE++E L + +++ +E
Sbjct: 840 TARDKSHPESKEIYEKLSEVTRKLERE 866
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 158/512 (30%), Positives = 251/512 (49%), Gaps = 16/512 (3%)
Query: 73 AFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDR 132
AF VL+ ++ G+Q+H +FK + +A LV MYGKCG L A VFD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 133 ISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSL 192
+ DR +WN+MI A V + ++ AC+ LRD +
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRD-IRS 200
Query: 193 GKQVHAYTFRNGDWRT-FTNNALVTMYAKLGRIDEAKALFGLFDDK-DLVSWNTVISSLS 250
G ++H+ + G T F NALV+MYAK + A+ LF F +K D V WN+++SS S
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 251 QNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNS 310
+ + E L M +G P+ T+ SAL AC + GKEIH L+++
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 311 FVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYE 370
+V +AL+ MY C K + + + V WN++I GY +N EA++ F +M+
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMI-A 379
Query: 371 SDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEI 430
+ + +++S++ A R L +H YV+K G++ + V N L+DMYS+
Sbjct: 380 AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCY 439
Query: 431 SKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSV 490
F M +D++SW T+I GY H +AL L D+ + + E DE I
Sbjct: 440 MGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR---MEIDEMI------- 489
Query: 491 TLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQM 550
L ++L EIH + L++ L D + + L+D+Y KC + + VF+ +
Sbjct: 490 -LGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESI 547
Query: 551 PTRNVITWNVLIMAYGMHGKGEEALELFRRMV 582
++V++W +I + ++G EA+ELFRRMV
Sbjct: 548 KGKDVVSWTSMISSSALNGNESEAVELFRRMV 579
Score = 182 bits (462), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 142/504 (28%), Positives = 238/504 (47%), Gaps = 40/504 (7%)
Query: 187 RDGLSLGKQVHAYTFRN--GDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNT 244
R +S G+Q+H+ F+ F LV MY K G +D+A+ +F D+ +WNT
Sbjct: 93 RRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNT 152
Query: 245 VISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNT 304
+I + N AL ++M GV + + L AC+ L +R+G E+H L
Sbjct: 153 MIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSL-LVKL 211
Query: 305 DLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAV-WNAMIAGYARNEFDDEAIKL 363
F+ +ALV MY R +FDG + AV WN++++ Y+ + E ++L
Sbjct: 212 GYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLEL 271
Query: 364 FIEMVYESDFTPNSTTLSSLLPACVRCK-AFLDKEGIHGYVVKRGFEKDK-YVQNALMDM 421
F EM + + PNS T+ S L AC A L KE IH V+K + YV NAL+ M
Sbjct: 272 FREM-HMTGPAPNSYTIVSALTACDGFSYAKLGKE-IHASVLKSSTHSSELYVCNALIAM 329
Query: 422 YSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDE 481
Y+R G++ ++ I M+ D+V+WN++I GYV + +AL DM
Sbjct: 330 YTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGH------- 382
Query: 482 SIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLN 541
K + V++ +++ E+HAY +K +++ VG+ LIDMY+KC
Sbjct: 383 ----KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTC 438
Query: 542 LSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKE------IRPNE 595
F +M +++I+W +I Y + EALELFR + ++ E +R +
Sbjct: 439 YMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Query: 596 VTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIK 655
V + H ++ +G L T+ N LVD+ G+ + A ++ +
Sbjct: 499 VLKSMLIVKEIHCHILRKG--LLDTVIQNE-----------LVDVYGKCRNMGYATRVFE 545
Query: 656 TMPSNMKKVDAWSSLLGACKIHQN 679
++ K V +W+S++ + ++ N
Sbjct: 546 SIKG--KDVVSWTSMISSSALNGN 567
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 163/370 (44%), Gaps = 20/370 (5%)
Query: 276 TLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDG 335
A L C + G+++H + + F+ LV MY C D VFD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 336 ILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLD 395
+ RT WN MI Y N A+ L+ M E ++ +LL AC + +
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEG-VPLGLSSFPALLKACAKLRDIRS 200
Query: 396 KEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIF-GSMDRRDIVSWNTMITGYV 454
+H +VK G+ ++ NAL+ MY++ + ++ +F G ++ D V WN++++ Y
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 455 VCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAY 514
G+ + L L +M PNS T+++ L C EIHA
Sbjct: 261 TSGKSLETLELFREMHMTGP-----------APNSYTIVSALTACDGFSYAKLGKEIHAS 309
Query: 515 ALKQKL-ATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEE 573
LK ++++ V +ALI MY +CG + + + QM +V+TWN LI Y + +E
Sbjct: 310 VLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKE 369
Query: 574 ALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDH 633
ALE F M+A + +EV+ +I AA + G+ L H HG + +
Sbjct: 370 ALEFFSDMIAAGH-----KSDEVSMTSIIAASGRLSNLLAGMEL-HAYVIKHGWDSNLQV 423
Query: 634 YACLVDLLGR 643
L+D+ +
Sbjct: 424 GNTLIDMYSK 433
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 426 bits (1095), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/557 (37%), Positives = 332/557 (59%), Gaps = 23/557 (4%)
Query: 311 FVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYE 370
F+ + L++MY + +FD + +R V W MI+ Y++ + +A++L + M+ +
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 371 SDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEI 430
+ PN T SS+L +C D +H ++K G E D +V++AL+D+++++G E
Sbjct: 157 -NVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 431 SKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSV 490
+ S+F M D + WN++I G+ R D AL L M+R
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRA-----------GFIAEQA 261
Query: 491 TLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQM 550
TL +VL C + H + +K D+ + +AL+DMY KCG L + VF+QM
Sbjct: 262 TLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQM 319
Query: 551 PTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGM 610
R+VITW+ +I +G +EAL+LF RM + +PN +T + + ACSH+G+
Sbjct: 320 KERDVITWSTMISGLAQNGYSQEALKLFERM-----KSSGTKPNYITIVGVLFACSHAGL 374
Query: 611 VDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSL 670
+++G F +MK +GI+P +HY C++DLLG++G++++A KL+ M V W +L
Sbjct: 375 LEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAV-TWRTL 433
Query: 671 LGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVR 730
LGAC++ +N+ + E AAK+++ L+P A Y LLSNIY+++ WD +IR +M++ G++
Sbjct: 434 LGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIK 493
Query: 731 KEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDE 790
KEPGCSWIE ++H F+ GD SHPQ E+ + L L+ R+ GYVP+T+ VL D++ E
Sbjct: 494 KEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGE 553
Query: 791 EKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDV 850
+ E L HSE+LA+AFGL+ P IR+ KNLR+C DCHV K SK+ R I++RD
Sbjct: 554 QMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDP 613
Query: 851 RRFHHFRNGTCSCGDYW 867
R+HHF++G CSCGDYW
Sbjct: 614 IRYHHFQDGKCSCGDYW 630
Score = 162 bits (410), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 200/403 (49%), Gaps = 18/403 (4%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+A+ ++ + G+ D+ + ++K ++ G I H++ G+ V N L
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLV-NVL 102
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
+NMY K L AH +FD++ R+ +SW +MI+A + NV P
Sbjct: 103 INMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNV 162
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFG 232
+T S+ +C +G+S + +H + G + F +AL+ ++AKLG ++A ++F
Sbjct: 163 YTYSSVLRSC----NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD 218
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRT 292
D + WN++I +QN R + AL M ++G + TL S L AC+ L +L
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278
Query: 293 GKEIHGYALR-NTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGY 351
G + H + ++ + DLI N +ALVDMYC C + VF+ + R V W+ MI+G
Sbjct: 279 GMQAHVHIVKYDQDLILN----NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGL 334
Query: 352 ARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKR---GF 408
A+N + EA+KLF E + S PN T+ +L AC A L ++G + + + G
Sbjct: 335 AQNGYSQEALKLF-ERMKSSGTKPNYITIVGVLFAC--SHAGLLEDGWYYFRSMKKLYGI 391
Query: 409 EKDKYVQNALMDMYSRMGRIEISKSIFGSMD-RRDIVSWNTMI 450
+ + ++D+ + G+++ + + M+ D V+W T++
Sbjct: 392 DPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 127/260 (48%), Gaps = 6/260 (2%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+ +W + ++ +A+ M+ V P+ + + +VL++ G++D+ + +
Sbjct: 125 RNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RML 181
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
H + K G S V V ++L++++ K G+ A VFD + D + WNS+I +
Sbjct: 182 HCGIIKEGLES-DVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSR 240
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNA 213
TL S+ AC+ L L LG Q H + + D NNA
Sbjct: 241 SDVALELFKRMKRAGFIAEQATLTSVLRACTGLA-LLELGMQAHVHIVKY-DQDLILNNA 298
Query: 214 LVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPD 273
LV MY K G +++A +F ++D+++W+T+IS L+QN +EAL M SG +P+
Sbjct: 299 LVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPN 358
Query: 274 GVTLASALPACSHLEMLRTG 293
+T+ L ACSH +L G
Sbjct: 359 YITIVGVLFACSHAGLLEDG 378
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 424 bits (1091), Expect = e-118, Method: Compositional matrix adjust.
Identities = 246/704 (34%), Positives = 380/704 (53%), Gaps = 24/704 (3%)
Query: 74 FPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRI 133
+ +++ A + L G++IH H+ ++ + N +++MYGKCG L A VFD +
Sbjct: 70 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTI-LNNHILSMYGKCGSLRDAREVFDFM 128
Query: 134 SDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLG 193
+R+ VS+ S+I + ++ P F SI AC++ D + LG
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSD-VGLG 187
Query: 194 KQVHAYTFR-NGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQN 252
KQ+HA + NAL+ MY + ++ +A +F KDL+SW+++I+ SQ
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 253 DRFEEALLFLYHMLQSGV-RPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSF 311
EAL L ML GV P+ S+L ACS L G +IHG ++ ++L N+
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIK-SELAGNAI 306
Query: 312 VGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYES 371
G +L DMY C + R VFD I R A WN +IAG A N + DEA+ +F +M S
Sbjct: 307 AGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQM-RSS 365
Query: 372 DFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEIS 431
F P++ +L SLL A + A IH Y++K GF D V N+L+ MY+ +
Sbjct: 366 GFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCC 425
Query: 432 KSIFGSM-DRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSV 490
++F + D VSWNT++T C +H+ + +L + E E P+ +
Sbjct: 426 FNLFEDFRNNADSVSWNTILTA---CLQHEQPVEMLRLFKLMLVSECE--------PDHI 474
Query: 491 TLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQM 550
T+ +L GC ++H Y+LK LA + + + LIDMYAKCG L +R +FD M
Sbjct: 475 TMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Query: 551 PTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGM 610
R+V++W+ LI+ Y G GEEAL LF+ M + I PN VT++ + ACSH G+
Sbjct: 535 DNRDVVSWSTLIVGYAQSGFGEEALILFKEM-----KSAGIEPNHVTFVGVLTACSHVGL 589
Query: 611 VDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSL 670
V+EGL L+ TM+ HGI P+ +H +C+VDLL R+GR+ EA + I M V W +L
Sbjct: 590 VEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLE-PDVVVWKTL 648
Query: 671 LGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVR 730
L ACK N+ + + AA+ +L ++P ++ +VLL ++++S+G W+ A +R MK+ V+
Sbjct: 649 LSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVK 708
Query: 731 KEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKE 774
K PG SWIE D++H F A D HP+ +++ L N+ +M E
Sbjct: 709 KIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLDE 752
Score = 218 bits (556), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/528 (28%), Positives = 255/528 (48%), Gaps = 20/528 (3%)
Query: 47 AQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTS 106
+Q+ +AI Y M+ + PD FAF +++KA A +D+ LGKQ+H V K +S
Sbjct: 144 SQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHL 203
Query: 107 VAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXX 166
+A N+L+ MY + ++ A VF I +D +SW+S+IA +
Sbjct: 204 IA-QNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLS 262
Query: 167 XNV-DPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRI 224
V P + S ACS+L G Q+H ++ +L MYA+ G +
Sbjct: 263 FGVFHPNEYIFGSSLKACSSLLRP-DYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFL 321
Query: 225 DEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPAC 284
+ A+ +F + D SWN +I+ L+ N +EA+ M SG PD ++L S L A
Sbjct: 322 NSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQ 381
Query: 285 SHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAV- 343
+ L G +IH Y ++ L D + V ++L+ MY C +F+ +V
Sbjct: 382 TKPMALSQGMQIHSYIIKWGFLADLT-VCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVS 440
Query: 344 WNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYV 403
WN ++ ++E E ++LF +++ S+ P+ T+ +LL CV + +H Y
Sbjct: 441 WNTILTACLQHEQPVEMLRLF-KLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYS 499
Query: 404 VKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDAL 463
+K G +++++N L+DMY++ G + ++ IF SMD RD+VSW+T+I GY G ++AL
Sbjct: 500 LKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEAL 559
Query: 464 NLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHA-YALKQKLAT 522
L +M+ S ++PN VT + VL C +++A + ++
Sbjct: 560 ILFKEMK-----------SAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISP 608
Query: 523 DIAVGSALIDMYAKCGCLNLSRIVFDQMPTR-NVITWNVLIMAYGMHG 569
S ++D+ A+ G LN + D+M +V+ W L+ A G
Sbjct: 609 TKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQG 656
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 140/316 (44%), Gaps = 16/316 (5%)
Query: 339 RTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEG 398
+T + N I ++ F EA++ F S F T SL+ AC ++
Sbjct: 29 KTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRK 88
Query: 399 IHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGR 458
IH +++ + D + N ++ MY + G + ++ +F M R++VS+ ++ITGY G+
Sbjct: 89 IHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQ 148
Query: 459 HDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQ 518
+A+ L M Q+D L P+ +++ C ++HA +K
Sbjct: 149 GAEAIRLYLKML--QED---------LVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKL 197
Query: 519 KLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELF 578
+ ++ + +ALI MY + ++ + VF +P +++I+W+ +I + G EAL
Sbjct: 198 ESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHL 257
Query: 579 RRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLV 638
+ M+ S PNE + + ACS D G + H + + ++ L
Sbjct: 258 KEML----SFGVFHPNEYIFGSSLKACSSLLRPDYGSQI-HGLCIKSELAGNAIAGCSLC 312
Query: 639 DLLGRSGRVEEAYKLI 654
D+ R G + A ++
Sbjct: 313 DMYARCGFLNSARRVF 328
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 9/216 (4%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W L Q ++ + + M+ + PD+ +L+ ++ L LG Q+H +
Sbjct: 440 SWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYS 499
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
K G A + N L++MY KCG L A +FD + +RD VSW+++I +
Sbjct: 500 LKTGLAPEQF-IKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 558
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACSN---LRDGLSLGKQVHAYTFRNGDWRTFTN-NA 213
++P T V + ACS+ + +GL L + +G T + +
Sbjct: 559 LILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQT---EHGISPTKEHCSC 615
Query: 214 LVTMYAKLGRIDEAKALFGLFD-DKDLVSWNTVISS 248
+V + A+ GR++EA+ + D+V W T++S+
Sbjct: 616 VVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSA 651
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/600 (37%), Positives = 345/600 (57%), Gaps = 26/600 (4%)
Query: 273 DGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADK---- 328
D V + + S LR +I YA++ + + D SFV + +C +
Sbjct: 25 DTVNTQNPILLISKCNSLRELMQIQAYAIK-SHIEDVSFVAKLI--NFCTESPTESSMSY 81
Query: 329 GRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACV 388
R +F+ + + ++N+M GY+R E LF+E++ E P++ T SLL AC
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEIL-EDGILPDNYTFPSLLKACA 140
Query: 389 RCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNT 448
KA + +H +K G + + YV L++MY+ ++ ++ +F + +V +N
Sbjct: 141 VAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNA 200
Query: 449 MITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXX 508
MITGY R ++AL+L +MQ LKPN +TL++VL C
Sbjct: 201 MITGYARRNRPNEALSLFREMQGKY-----------LKPNEITLLSVLSSCALLGSLDLG 249
Query: 509 XEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMH 568
IH YA K + V +ALIDM+AKCG L+ + +F++M ++ W+ +I+AY H
Sbjct: 250 KWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANH 309
Query: 569 GKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIE 628
GK E+++ +F RM +E ++P+E+T++ + ACSH+G V+EG F M + GI
Sbjct: 310 GKAEKSMLMFERMRSEN-----VQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIV 364
Query: 629 PSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAK 688
PS HY +VDLL R+G +E+AY+ I +P + + W LL AC H NL++ E ++
Sbjct: 365 PSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPM-LWRILLAACSSHNNLDLAEKVSE 423
Query: 689 QLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFL 748
++ L+ + YV+LSN+Y+ W+ +RK MK+ K PGCS IE + VH+F
Sbjct: 424 RIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFF 483
Query: 749 AGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLH-DVDDEEKETMLCGHSERLAIAF 807
+GD + +LH L+ +++ ++ GYVPDTS V+H +++D+EKE L HSE+LAI F
Sbjct: 484 SGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITF 543
Query: 808 GLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
GLLNTPPGTTIRV KNLRVC DCH A K IS I R+++LRDV+RFHHF +G CSCGD+W
Sbjct: 544 GLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 176/364 (48%), Gaps = 15/364 (4%)
Query: 227 AKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH 286
A+ LF + D+V +N++ S+ E +L+ G+ PD T S L AC+
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 287 LEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNA 346
+ L G+++H +++ L DN +V L++MY C+ D R VFD I+ V +NA
Sbjct: 142 AKALEEGRQLHCLSMK-LGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNA 200
Query: 347 MIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKR 406
MI GYAR +EA+ LF EM + PN TL S+L +C + + IH Y K
Sbjct: 201 MITGYARRNRPNEALSLFREMQGKY-LKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKH 259
Query: 407 GFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLL 466
F K V AL+DM+++ G ++ + SIF M +D +W+ MI Y G+ + ++ L+
Sbjct: 260 SFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSM-LM 318
Query: 467 HDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYAL-KQKLATDIA 525
+ R ++ ++P+ +T + +L C + + + K + I
Sbjct: 319 FERMRSEN----------VQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIK 368
Query: 526 VGSALIDMYAKCGCLNLSRIVFDQMP-TRNVITWNVLIMAYGMHGKGEEALELFRRMVAE 584
+++D+ ++ G L + D++P + + W +L+ A H + A ++ R+
Sbjct: 369 HYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFEL 428
Query: 585 KDSN 588
DS+
Sbjct: 429 DDSH 432
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 154/322 (47%), Gaps = 5/322 (1%)
Query: 53 LQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANS 112
L+ S + ++ G+ PDN+ FP++LKA A L G+Q+H K G +V V +
Sbjct: 111 LEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGL-DDNVYVCPT 169
Query: 113 LVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPT 172
L+NMY +C D+ A VFDRI + V +N+MI R + P
Sbjct: 170 LINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPN 229
Query: 173 SFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTF-TNNALVTMYAKLGRIDEAKALF 231
TL+S+ +C+ L L LGK +H Y ++ + N AL+ M+AK G +D+A ++F
Sbjct: 230 EITLLSVLSSCA-LLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIF 288
Query: 232 GLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLR 291
KD +W+ +I + + + + E+++L M V+PD +T L ACSH +
Sbjct: 289 EKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVE 348
Query: 292 TGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI-LRRTVAVWNAMIAG 350
G++ + ++ + ++VD+ + D + + T +W ++A
Sbjct: 349 EGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAA 408
Query: 351 YARNEFDDEAIKLFIEMVYESD 372
+ + D A K+ E ++E D
Sbjct: 409 CSSHNNLDLAEKV-SERIFELD 429
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 141/309 (45%), Gaps = 5/309 (1%)
Query: 123 LAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHA 182
++ A H+F+ +S+ D V +NSM RF + P ++T S+ A
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 183 CSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVS 241
C+ + L G+Q+H + + G D + L+ MY + +D A+ +F + +V
Sbjct: 139 CA-VAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVC 197
Query: 242 WNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYAL 301
+N +I+ ++ +R EAL M ++P+ +TL S L +C+ L L GK IH YA
Sbjct: 198 YNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAK 257
Query: 302 RNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAI 361
+++ V +AL+DM+ C D +F+ + + W+AMI YA N E
Sbjct: 258 KHS-FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYA-NHGKAEKS 315
Query: 362 KLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLD-KEGIHGYVVKRGFEKDKYVQNALMD 420
L E + + P+ T LL AC + ++ V K G +++D
Sbjct: 316 MLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVD 375
Query: 421 MYSRMGRIE 429
+ SR G +E
Sbjct: 376 LLSRAGNLE 384
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/614 (37%), Positives = 348/614 (56%), Gaps = 37/614 (6%)
Query: 279 SALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKAD---KGRWVFDG 335
S L CS E L K+IH L+ T L+ +S+ + + + +D + VFDG
Sbjct: 19 SCLQRCSKQEEL---KQIHARMLK-TGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDG 74
Query: 336 ILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTP-NSTTLSSLLPACVRCKAFL 394
R +WN MI G++ ++ + ++ L+ M+ S P N+ T SLL AC AF
Sbjct: 75 FDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSS--APHNAYTFPSLLKACSNLSAFE 132
Query: 395 DKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYV 454
+ IH + K G+E D Y N+L++ Y+ G +++ +F + D VSWN++I GYV
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 455 VCGRHDDALNLLH--------------------DMQRGQDDEYEDDESIPLKPNSVTLMT 494
G+ D AL L DM + + + ++ ++P++V+L
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252
Query: 495 VLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRN 554
L C IH+Y K ++ D +G LIDMYAKCG + + VF + ++
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS 312
Query: 555 VITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEG 614
V W LI Y HG G EA+ F M I+PN +T+ A+ ACS++G+V+EG
Sbjct: 313 VQAWTALISGYAYHGHGREAISKFMEM-----QKMGIKPNVITFTAVLTACSYTGLVEEG 367
Query: 615 LNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGAC 674
+F++M+ ++ ++P+ +HY C+VDLLGR+G ++EA + I+ MP V W +LL AC
Sbjct: 368 KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAV-IWGALLKAC 426
Query: 675 KIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPG 734
+IH+N+E+GE + L+ ++P YV +NI++ WD+A + R+ MKE GV K PG
Sbjct: 427 RIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPG 486
Query: 735 CSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHD-VDDEEKE 793
CS I H+FLAGD SHP+ +++ + +++ + GYVP+ +L D VDD+E+E
Sbjct: 487 CSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDERE 546
Query: 794 TMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRF 853
++ HSE+LAI +GL+ T PGT IR+ KNLRVC DCH TK ISKI R+I++RD RF
Sbjct: 547 AIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRF 606
Query: 854 HHFRNGTCSCGDYW 867
HHFR+G CSCGDYW
Sbjct: 607 HHFRDGKCSCGDYW 620
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 171/397 (43%), Gaps = 41/397 (10%)
Query: 91 KQIHGHVFKFGYASTSVAVANSLVNMYGKCGD--LAGAHHVFDRISDRDHVSWNSMIAAA 148
KQIH + K G S A+ L L A VFD D WN MI
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 149 CRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWR 207
+ ++T S+ ACSNL Q+HA + G +
Sbjct: 91 SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNL-SAFEETTQIHAQITKLGYEND 149
Query: 208 TFTNNALVTMYA-------------------------------KLGRIDEAKALFGLFDD 236
+ N+L+ YA K G++D A LF +
Sbjct: 150 VYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE 209
Query: 237 KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEI 296
K+ +SW T+IS Q D +EAL + M S V PD V+LA+AL AC+ L L GK I
Sbjct: 210 KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI 269
Query: 297 HGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEF 356
H Y L T + +S +G L+DMY C + ++ VF I +++V W A+I+GYA +
Sbjct: 270 HSY-LNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGH 328
Query: 357 DDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQN 416
EAI F+EM + PN T +++L AC +++ + Y ++R + +++
Sbjct: 329 GREAISKFMEM-QKMGIKPNVITFTAVLTACSY-TGLVEEGKLIFYSMERDYNLKPTIEH 386
Query: 417 --ALMDMYSRMGRIEISKSIFGSMD-RRDIVSWNTMI 450
++D+ R G ++ +K M + + V W ++
Sbjct: 387 YGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423
Score = 133 bits (334), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 172/390 (44%), Gaps = 46/390 (11%)
Query: 227 AKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH 286
A+ +F FD D WN +I S +D E +LL ML S + T S L ACS+
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 287 LEMLRTGKEIH------GY--------ALRNTDLIDNSF----------------VGSAL 316
L +IH GY +L N+ + +F +++
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 317 VDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPN 376
+ Y K D +F + + W MI+GY + + + EA++LF EM SD P+
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEM-QNSDVEPD 246
Query: 377 STTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFG 436
+ +L++ L AC + A + IH Y+ K D + L+DMY++ G +E + +F
Sbjct: 247 NVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFK 306
Query: 437 SMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVL 496
++ ++ + +W +I+GY G +A++ +MQ+ + +KPN +T VL
Sbjct: 307 NIKKKSVQAWTALISGYAYHGHGREAISKFMEMQK-----------MGIKPNVITFTAVL 355
Query: 497 PGCXXXXXXXXXXEIHAYALKQ--KLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR- 553
C I Y++++ L I ++D+ + G L+ ++ +MP +
Sbjct: 356 TACSYTGLVEEGKLIF-YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKP 414
Query: 554 NVITWNVLIMAYGMHGKGEEALELFRRMVA 583
N + W L+ A +H E E+ ++A
Sbjct: 415 NAVIWGALLKACRIHKNIELGEEIGEILIA 444
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 143/328 (43%), Gaps = 35/328 (10%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+++ Y M+ + P + + FP++LKA + ++ QIH + K GY + AV NSL
Sbjct: 98 RSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAV-NSL 156
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNS------------------------------ 143
+N Y G+ AH +FDRI + D VSWNS
Sbjct: 157 INSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWT 216
Query: 144 -MIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFR 202
MI+ + +V+P + +L + AC+ L L GK +H+Y +
Sbjct: 217 TMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQL-GALEQGKWIHSYLNK 275
Query: 203 NG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLF 261
+ L+ MYAK G ++EA +F K + +W +IS + + EA+
Sbjct: 276 TRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISK 335
Query: 262 LYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYC 321
M + G++P+ +T + L ACS+ ++ GK I R+ +L +VD+
Sbjct: 336 FMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLG 395
Query: 322 NCKKADKG-RWVFDGILRRTVAVWNAMI 348
D+ R++ + L+ +W A++
Sbjct: 396 RAGLLDEAKRFIQEMPLKPNAVIWGALL 423
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 80/194 (41%), Gaps = 6/194 (3%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W + Q+ +A+ + M + V PDN + L A A + L GK IH ++
Sbjct: 214 SWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYL 273
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
K SV + L++MY KCG++ A VF I + +W ++I+
Sbjct: 274 NKTRIRMDSV-LGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREA 332
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGL-SLGKQVHAYTFRNGDWRTFTNN--AL 214
+ P T ++ ACS GL GK + R+ + + + +
Sbjct: 333 ISKFMEMQKMGIKPNVITFTAVLTACS--YTGLVEEGKLIFYSMERDYNLKPTIEHYGCI 390
Query: 215 VTMYAKLGRIDEAK 228
V + + G +DEAK
Sbjct: 391 VDLLGRAGLLDEAK 404
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/601 (37%), Positives = 342/601 (56%), Gaps = 35/601 (5%)
Query: 283 ACSHLEMLRTGKEIHGYALRNTDLIDNS--FVGSALVDMYCNCKKADKGRWVFDGILRRT 340
CS + L K++H + LR T + + F+ ++ + + + VFD I +
Sbjct: 57 TCSDMSQL---KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHS 113
Query: 341 VAVWNAMIAGYARN-EFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGI 399
+WN +I A + +EA L+ +M+ + +P+ T +L AC F + + +
Sbjct: 114 SFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQV 173
Query: 400 HGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRH 459
H +VK GF D YV N L+ +Y G +++++ +F M R +VSWN+MI V G +
Sbjct: 174 HCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEY 233
Query: 460 DDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQ- 518
D AL L +MQR +P+ T+ +VL C HA+ L++
Sbjct: 234 DSALQLFREMQRS------------FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKC 281
Query: 519 --KLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALE 576
+A D+ V ++LI+MY KCG L ++ VF M R++ +WN +I+ + HG+ EEA+
Sbjct: 282 DVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMN 341
Query: 577 LFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYAC 636
F RMV D + +RPN VT++ + AC+H G V++G F M ++ IEP+ +HY C
Sbjct: 342 FFDRMV---DKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGC 398
Query: 637 LVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGAC-KIHQNLEVGEIAAKQLLVLEP 695
+VDL+ R+G + EA ++ +MP V W SLL AC K ++E+ E A+ ++ +
Sbjct: 399 IVDLIARAGYITEAIDMVMSMPMKPDAV-IWRSLLDACCKKGASVELSEEIARNIIGTKE 457
Query: 696 -------NVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFL 748
N + YVLLS +Y+SA W+ +RK M E G+RKEPGCS IE H+F
Sbjct: 458 DNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFF 517
Query: 749 AGDASHPQSKELHEYLENLLQRMRKEGYVPDTS--CVLHDVDDEEKETMLCGHSERLAIA 806
AGD SHPQ+K++++ L+ + R+R GY+PD S ++ +D KE L HSERLAIA
Sbjct: 518 AGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIA 577
Query: 807 FGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDY 866
FGL+N PP T IR+ KNLRVCNDCH TK ISK+ + EII+RD RFHHF++G+CSC DY
Sbjct: 578 FGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDY 637
Query: 867 W 867
W
Sbjct: 638 W 638
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 195/417 (46%), Gaps = 17/417 (4%)
Query: 77 VLKAAAGVNDLNLGKQIHGHVFKFGYAS--TSVAVANSLVNMYGKCGDLAGAHHVFDRIS 134
+ A +D++ KQ+H + Y ++ + ++ + D+ A VFD I
Sbjct: 51 IFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIE 110
Query: 135 DRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD--PTSFTLVSIAHACSNLRDGLSL 192
+ WN++I A + P T + AC+ + G S
Sbjct: 111 NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIF-GFSE 169
Query: 193 GKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQ 251
GKQVH ++G + NN L+ +Y G +D A+ +F ++ LVSWN++I +L +
Sbjct: 170 GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVR 229
Query: 252 NDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALR--NTDLIDN 309
++ AL L+ +Q PDG T+ S L AC+ L L G H + LR + D+ +
Sbjct: 230 FGEYDSALQ-LFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD 288
Query: 310 SFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMV- 368
V ++L++MYC C VF G+ +R +A WNAMI G+A + +EA+ F MV
Sbjct: 289 VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVD 348
Query: 369 YESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQN--ALMDMYSRMG 426
+ PNS T LL AC + F++K + ++ R + + +++ ++D+ +R G
Sbjct: 349 KRENVRPNSVTFVGLLIACNH-RGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAG 407
Query: 427 RIEISKSIFGSMDRR-DIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDES 482
I + + SM + D V W +++ C + ++ L ++ R ED+ES
Sbjct: 408 YITEAIDMVMSMPMKPDAVIWRSLLDA---CCKKGASVELSEEIARNIIGTKEDNES 461
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 150/343 (43%), Gaps = 45/343 (13%)
Query: 54 QAISTYANMVAAG-VPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANS 112
+A Y M+ G PD FP VLKA A + + GKQ+H + K G+ V V N
Sbjct: 133 EAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGG-DVYVNNG 191
Query: 113 LVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPT 172
L+++YG CG L A VFD + +R VSWNSMI A RF + +P
Sbjct: 192 LIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRF-GEYDSALQLFREMQRSFEPD 250
Query: 173 SFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGD----WRTFTNNALVTMYAKLGRIDEAK 228
+T+ S+ AC+ L LSLG HA+ R D N+L+ MY K G + A+
Sbjct: 251 GYTMQSVLSACAGL-GSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAE 309
Query: 229 ALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHML--QSGVRPDGVTLASALPACSH 286
+F +DL SWN +I + + R EEA+ F M+ + VRP+ VT L AC+H
Sbjct: 310 QVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNH 369
Query: 287 LEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNA 346
+ G++ +R+ YC + + D I R
Sbjct: 370 RGFVNKGRQYFDMMVRD----------------YCIEPALEHYGCIVDLIAR-------- 405
Query: 347 MIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVR 389
AGY I I+MV P++ SLL AC +
Sbjct: 406 --AGY---------ITEAIDMVMSMPMKPDAVIWRSLLDACCK 437
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 421 bits (1083), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/639 (34%), Positives = 355/639 (55%), Gaps = 71/639 (11%)
Query: 281 LPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNC-----KKADKGRWVFDG 335
P ++ +R +IH +++ + D + +A + +C + D +F+
Sbjct: 27 FPQINNCRTIRDLSQIHAVFIKSGQMRDT--LAAAEILRFCATSDLHHRDLDYAHKIFNQ 84
Query: 336 ILRRTVAVWNAMIAGYARNEFDDE--AIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAF 393
+ +R WN +I G++ ++ D AI LF EM+ + PN T S+L AC +
Sbjct: 85 MPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKI 144
Query: 394 LDKEGIHGYVVKRGFEKDKYVQ-------------------------------------- 415
+ + IHG +K GF D++V
Sbjct: 145 QEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKR 204
Query: 416 -------NALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHD 468
N ++D Y R+G + ++ +F M +R +VSWNTMI+GY + G DA+ + +
Sbjct: 205 DGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264
Query: 469 MQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGS 528
M++G ++PN VTL++VLP +H YA + D +GS
Sbjct: 265 MKKGD-----------IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 313
Query: 529 ALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSN 588
ALIDMY+KCG + + VF+++P NVITW+ +I + +HG+ +A++ F +M
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM-----RQ 368
Query: 589 KEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVE 648
+RP++V YI + ACSH G+V+EG F M + G+EP +HY C+VDLLGRSG ++
Sbjct: 369 AGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLD 428
Query: 649 EAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIY 708
EA + I MP V W +LLGAC++ N+E+G+ A L+ + P+ + YV LSN+Y
Sbjct: 429 EAEEFILNMPIKPDDV-IWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMY 487
Query: 709 SSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLL 768
+S G W + ++R +MKE +RK+PGCS I+ +H+F+ D SHP++KE++ L +
Sbjct: 488 ASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEIS 547
Query: 769 QRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCN 828
++R GY P T+ VL ++++E+KE +L HSE++A AFGL++T PG IR+ KNLR+C
Sbjct: 548 DKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICE 607
Query: 829 DCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
DCH + K ISK+ R+I +RD +RFHHF++G+CSC DYW
Sbjct: 608 DCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 120 bits (300), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 184/441 (41%), Gaps = 72/441 (16%)
Query: 92 QIHGHVFKFGYASTSVAVANSL-----VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIA 146
QIH K G ++A A L +++ + DL AH +F+++ R+ SWN++I
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR--DLDYAHKIFNQMPQRNCFSWNTIIR 98
Query: 147 AACRFXXXXXXXXXXXXXXXXN---VDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFR- 202
+ V+P FT S+ AC+ + GKQ+H +
Sbjct: 99 GFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKT-GKIQEGKQIHGLALKY 157
Query: 203 --NGDWRTFTN-------------------------------------------NALVTM 217
GD +N N ++
Sbjct: 158 GFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDG 217
Query: 218 YAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTL 277
Y +LG A+ LF + +VSWNT+IS S N F++A+ M + +RP+ VTL
Sbjct: 218 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277
Query: 278 ASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGIL 337
S LPA S L L G+ +H YA + ID+ +GSAL+DMY C +K VF+ +
Sbjct: 278 VSVLPAISRLGSLELGEWLHLYAEDSGIRIDD-VLGSALIDMYSKCGIIEKAIHVFERLP 336
Query: 338 RRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKE 397
R V W+AMI G+A + +AI F +M ++ P+ +LL AC L +E
Sbjct: 337 RENVITWSAMINGFAIHGQAGDAIDCFCKM-RQAGVRPSDVAYINLLTAC--SHGGLVEE 393
Query: 398 GIHGY---VVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD-RRDIVSWNTMI--- 450
G + V G E ++D+ R G ++ ++ +M + D V W ++
Sbjct: 394 GRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGAC 453
Query: 451 --TGYVVCGRHDDALNLLHDM 469
G V G+ N+L DM
Sbjct: 454 RMQGNVEMGKR--VANILMDM 472
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 125/289 (43%), Gaps = 49/289 (16%)
Query: 53 LQAISTYANMVA-AGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVAN 111
L AI+ + M++ V P+ F FP+VLKA A + GKQIHG K+G+ ++N
Sbjct: 109 LIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSN 168
Query: 112 SLVNMYGKC---------------------------------------------GDLAGA 126
LV MY C GD A
Sbjct: 169 -LVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAA 227
Query: 127 HHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNL 186
+FD++ R VSWN+MI+ ++ P TLVS+ A S L
Sbjct: 228 RMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRL 287
Query: 187 RDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTV 245
L LG+ +H Y +G +AL+ MY+K G I++A +F +++++W+ +
Sbjct: 288 -GSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAM 346
Query: 246 ISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGK 294
I+ + + + +A+ M Q+GVRP V + L ACSH ++ G+
Sbjct: 347 INGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGR 395
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 117/298 (39%), Gaps = 41/298 (13%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
RS +W + + + F A+ + M + P+ +VL A + + L LG+ +
Sbjct: 237 RSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWL 296
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
H + G V + ++L++MY KCG + A HVF+R+ + ++W++MI
Sbjct: 297 HLYAEDSGIRIDDV-LGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQ 355
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNA 213
V P+ +++ ACS H G R F+
Sbjct: 356 AGDAIDCFCKMRQAGVRPSDVAYINLLTACS------------HGGLVEEGR-RYFSQ-- 400
Query: 214 LVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPD 273
+V++ RI+ + ++ L ++ +EA F+ +M ++PD
Sbjct: 401 MVSVDGLEPRIEH---------------YGCMVDLLGRSGLLDEAEEFILNM---PIKPD 442
Query: 274 GVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRW 331
V + L AC + GK + + ++V AL +MY A +G W
Sbjct: 443 DVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYV--ALSNMY-----ASQGNW 493
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/602 (37%), Positives = 344/602 (57%), Gaps = 30/602 (4%)
Query: 277 LASALPACSHL--EMLRTG-------KEIHGYALRNTDLIDNSFVGSALVDMYCNCKKAD 327
LA P + E+LR K+IH LR NS + + L++
Sbjct: 2 LAKQTPLTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLL-TQLLENLVVIGDMC 60
Query: 328 KGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
R VFD + + + +WN + GY RN+ E++ L+ +M + P+ T ++ A
Sbjct: 61 YARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKM-RDLGVRPDEFTYPFVVKAI 119
Query: 388 VRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWN 447
+ F +H +VVK GF V L+ MY + G + ++ +F SM +D+V+WN
Sbjct: 120 SQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWN 179
Query: 448 TMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXX 507
+ V G AL + M + ++ +S T++++L C
Sbjct: 180 AFLAVCVQTGNSAIALEYFNKMC-----------ADAVQFDSFTVVSMLSACGQLGSLEI 228
Query: 508 XXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGM 567
EI+ A K+++ +I V +A +DM+ KCG +R++F++M RNV++W+ +I+ Y M
Sbjct: 229 GEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAM 288
Query: 568 HGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTM--KANH 625
+G EAL LF M N+ +RPN VT++ + +ACSH+G+V+EG F M +
Sbjct: 289 NGDSREALTLFTTM-----QNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDK 343
Query: 626 GIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEI 685
+EP +HYAC+VDLLGRSG +EEAY+ IK MP W +LLGAC +H+++ +G+
Sbjct: 344 NLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVE-PDTGIWGALLGACAVHRDMILGQK 402
Query: 686 AAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVH 745
A L+ P++ S++VLLSNIY++AG WD +R KM+++G +K S +E ++H
Sbjct: 403 VADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIH 462
Query: 746 KFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAI 805
F GD SHPQSK ++E L+ +L+++RK GYVPDT V HDV+ EEKE L HSE+LAI
Sbjct: 463 FFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAI 522
Query: 806 AFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGD 865
AFGL+ PG IRV KNLR C+DCH +KF+S + EII+RD RFHHFRNG CSC +
Sbjct: 523 AFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKE 582
Query: 866 YW 867
+W
Sbjct: 583 FW 584
Score = 132 bits (333), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 124/254 (48%), Gaps = 3/254 (1%)
Query: 53 LQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANS 112
+++ Y M GV PD F +P V+KA + + D + G +H HV K+G+ + VA
Sbjct: 91 FESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI-VATE 149
Query: 113 LVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPT 172
LV MY K G+L+ A +F+ + +D V+WN+ +A + V
Sbjct: 150 LVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFD 209
Query: 173 SFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALF 231
SFT+VS+ AC L L +G++++ + D NA + M+ K G + A+ LF
Sbjct: 210 SFTVVSMLSACGQL-GSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLF 268
Query: 232 GLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLR 291
+++VSW+T+I + N EAL M G+RP+ VT L ACSH ++
Sbjct: 269 EEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVN 328
Query: 292 TGKEIHGYALRNTD 305
GK +++ D
Sbjct: 329 EGKRYFSLMVQSND 342
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 167/409 (40%), Gaps = 18/409 (4%)
Query: 62 MVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCG 121
M+A P +L+A++ + K+IH V + G++ + + L N+ G
Sbjct: 1 MLAKQTPLTKQMLSELLRASS--SKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLV-VIG 57
Query: 122 DLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAH 181
D+ A VFD + WN++ R V P FT +
Sbjct: 58 DMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVK 117
Query: 182 ACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLV 240
A S L D S G +HA+ + G LV MY K G + A+ LF KDLV
Sbjct: 118 AISQLGD-FSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLV 176
Query: 241 SWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYA 300
+WN ++ Q AL + M V+ D T+ S L AC L L G+EI+ A
Sbjct: 177 AWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRA 236
Query: 301 LRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEA 360
R ++ N V +A +DM+ C + R +F+ + +R V W+ MI GYA N EA
Sbjct: 237 -RKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREA 295
Query: 361 IKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVV-----KRGFEKDKYVQ 415
+ LF M E PN T +L AC A L EG + + + E K
Sbjct: 296 LTLFTTMQNEG-LRPNYVTFLGVLSACSH--AGLVNEGKRYFSLMVQSNDKNLEPRKEHY 352
Query: 416 NALMDMYSRMGRIEISKSIFGSMD-RRDIVSWNTMITGYVVCGRHDDAL 463
++D+ R G +E + M D W ++ C H D +
Sbjct: 353 ACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGA---CAVHRDMI 398
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 166/384 (43%), Gaps = 26/384 (6%)
Query: 194 KQVHAYTFRNGDWRTFT-NNALVTMYAK----LGRIDEAKALFGLFDDKDLVSWNTVISS 248
K++HA R G F+ N+L+T + +G + A+ +F + WNT+
Sbjct: 28 KKIHAIVLRTG----FSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKG 83
Query: 249 LSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLID 308
+N E+LL M GVRPD T + A S L G +H + ++
Sbjct: 84 YVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVK-YGFGC 142
Query: 309 NSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMV 368
V + LV MY + ++F+ + + + WNA +A + A++ F +M
Sbjct: 143 LGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMC 202
Query: 369 YESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI 428
++ +S T+ S+L AC + + E I+ K + + V+NA +DM+ + G
Sbjct: 203 ADA-VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNT 261
Query: 429 EISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPN 488
E ++ +F M +R++VSW+TMI GY + G +AL L MQ L+PN
Sbjct: 262 EAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNE-----------GLRPN 310
Query: 489 SVTLMTVLPGCXXXXXXXXXXEIHAYALK---QKLATDIAVGSALIDMYAKCGCLNLSRI 545
VT + VL C + ++ + L + ++D+ + G L +
Sbjct: 311 YVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYE 370
Query: 546 VFDQMPTR-NVITWNVLIMAYGMH 568
+MP + W L+ A +H
Sbjct: 371 FIKKMPVEPDTGIWGALLGACAVH 394
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 129/329 (39%), Gaps = 56/329 (17%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
AW L + Q+ + A+ + M A V D+F ++L A + L +G++I+
Sbjct: 177 AWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRA 236
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
K ++ V N+ ++M+ KCG+ A +F+ + R+ VSW++MI
Sbjct: 237 RK-EEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREA 295
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTM 217
+ P T + + ACS HA
Sbjct: 296 LTLFTTMQNEGLRPNYVTFLGVLSACS------------HA------------------- 324
Query: 218 YAKLGRIDEAKALFGLF---DDKDLVS----WNTVISSLSQNDRFEEALLFLYHMLQSGV 270
G ++E K F L +DK+L + ++ L ++ EEA F+ M V
Sbjct: 325 ----GLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKM---PV 377
Query: 271 RPDGVTLASALPACS-HLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKG 329
PD + L AC+ H +M+ G+++ + I + V L ++Y A G
Sbjct: 378 EPDTGIWGALLGACAVHRDMI-LGQKVADVLVETAPDIGSYHV--LLSNIY-----AAAG 429
Query: 330 RW-VFDGILRRTVAVWNAMIAGYARNEFD 357
+W D + + + +A Y+ EF+
Sbjct: 430 KWDCVDKVRSKMRKLGTKKVAAYSSVEFE 458
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/606 (36%), Positives = 342/606 (56%), Gaps = 53/606 (8%)
Query: 295 EIHGYALRNTDLIDNSF--VGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYA 352
+IH LR+ L+ + + L Y + K +F + + ++ A I +
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106
Query: 353 RNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDK 412
N D+A L+++++ S+ PN T SSLL +C L IH +V+K G D
Sbjct: 107 INGLKDQAFLLYVQLL-SSEINPNEFTFSSLLKSCSTKSGKL----IHTHVLKFGLGIDP 161
Query: 413 YVQNALMDMYSR-------------------------------MGRIEISKSIFGSMDRR 441
YV L+D+Y++ G +E ++++F SM R
Sbjct: 162 YVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCER 221
Query: 442 DIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXX 501
DIVSWN MI GY G +DAL L + E P KP+ +T++ L C
Sbjct: 222 DIVSWNVMIDGYAQHGFPNDALMLFQKLLA---------EGKP-KPDEITVVAALSACSQ 271
Query: 502 XXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVL 561
IH + ++ ++ V + LIDMY+KCG L + +VF+ P ++++ WN +
Sbjct: 272 IGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAM 331
Query: 562 IMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTM 621
I Y MHG ++AL LF M ++P ++T+I AC+H+G+V+EG+ +F +M
Sbjct: 332 IAGYAMHGYSQDALRLFNEM----QGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESM 387
Query: 622 KANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLE 681
+GI+P +HY CLV LLGR+G+++ AY+ IK M + V WSS+LG+CK+H +
Sbjct: 388 GQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSV-LWSSVLGSCKLHGDFV 446
Query: 682 VGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHR 741
+G+ A+ L+ L + YVLLSNIY+S G ++ +R MKE G+ KEPG S IE
Sbjct: 447 LGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIE 506
Query: 742 DEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSE 801
++VH+F AGD H +SKE++ L + +R++ GYVP+T+ VL D+++ EKE L HSE
Sbjct: 507 NKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSE 566
Query: 802 RLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTC 861
RLAIA+GL++T PG+ +++ KNLRVC+DCH TK ISKI R+I++RD RFHHF +G+C
Sbjct: 567 RLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSC 626
Query: 862 SCGDYW 867
SCGD+W
Sbjct: 627 SCGDFW 632
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 152/340 (44%), Gaps = 50/340 (14%)
Query: 195 QVHAYTFRNG----DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLS 250
Q+HA R+ N L YA G+I + ALF D DL + I++ S
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106
Query: 251 QNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNS 310
N ++A L +L S + P+ T +S L +CS ++GK IH + L+ ID
Sbjct: 107 INGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGID-P 161
Query: 311 FVGSALVDMY-----------------------------CNCKKA--DKGRWVFDGILRR 339
+V + LVD+Y C K+ + R +FD + R
Sbjct: 162 YVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCER 221
Query: 340 TVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGI 399
+ WN MI GYA++ F ++A+ LF +++ E P+ T+ + L AC + A I
Sbjct: 222 DIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWI 281
Query: 400 HGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRH 459
H +V + V L+DMYS+ G +E + +F R+DIV+WN MI GY + G
Sbjct: 282 HVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYS 341
Query: 460 DDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
DAL L ++MQ L+P +T + L C
Sbjct: 342 QDALRLFNEMQ----------GITGLQPTDITFIGTLQAC 371
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 153/334 (45%), Gaps = 56/334 (16%)
Query: 169 VDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG------------------------ 204
++P FT S+ +CS GK +H + + G
Sbjct: 126 INPNEFTFSSLLKSCST-----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSA 180
Query: 205 --------DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFE 256
+ ++ A++T YAK G ++ A+ALF ++D+VSWN +I +Q+
Sbjct: 181 QKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPN 240
Query: 257 EALLFLYHMLQSG-VRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSA 315
+AL+ +L G +PD +T+ +AL ACS + L TG+ IH + ++++ + N V +
Sbjct: 241 DALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVF-VKSSRIRLNVKVCTG 299
Query: 316 LVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTP 375
L+DMY C ++ VF+ R+ + WNAMIAGYA + + +A++LF EM + P
Sbjct: 300 LIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQP 359
Query: 376 NSTTLSSLLPACVRCKAFLDKEGI-------HGYVVKRGFEKDKYVQNALMDMYSRMGRI 428
T L AC A L EGI Y +K E L+ + R G++
Sbjct: 360 TDITFIGTLQACAH--AGLVNEGIRIFESMGQEYGIKPKIEH----YGCLVSLLGRAGQL 413
Query: 429 EISKSIFGSMDR-RDIVSWNTMITGYVVCGRHDD 461
+ + +M+ D V W++++ C H D
Sbjct: 414 KRAYETIKNMNMDADSVLWSSVLGS---CKLHGD 444
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 123/279 (44%), Gaps = 44/279 (15%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
QA Y ++++ + P+ F F ++LK+ + + GK IH HV KFG VA L
Sbjct: 113 QAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLG-IDPYVATGL 167
Query: 114 VNMYGKCGDLAGAHHVFDRISDR-------------------------------DHVSWN 142
V++Y K GD+ A VFDR+ +R D VSWN
Sbjct: 168 VDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWN 227
Query: 143 SMI-AAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTF 201
MI A P T+V+ ACS + L G+ +H +
Sbjct: 228 VMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQI-GALETGRWIHVFV- 285
Query: 202 RNGDWRTFTN--NALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEAL 259
++ R L+ MY+K G ++EA +F KD+V+WN +I+ + + ++AL
Sbjct: 286 KSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDAL 345
Query: 260 LFLYHMLQ--SGVRPDGVTLASALPACSHLEMLRTGKEI 296
L++ +Q +G++P +T L AC+H ++ G I
Sbjct: 346 R-LFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRI 383
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 55 AISTYANMVAAGVP-PDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
A+ + ++A G P PD A L A + + L G+ IH V K +V V L
Sbjct: 242 ALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFV-KSSRIRLNVKVCTGL 300
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAA-ACRFXXXXXXXXXXXXXXXXNVDPT 172
++MY KCG L A VF+ +D V+WN+MIA A + PT
Sbjct: 301 IDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPT 360
Query: 173 SFTLVSIAHACSN---LRDGL----SLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRID 225
T + AC++ + +G+ S+G++ Y + + LV++ + G++
Sbjct: 361 DITFIGTLQACAHAGLVNEGIRIFESMGQE---YGIKP---KIEHYGCLVSLLGRAGQLK 414
Query: 226 EA-KALFGLFDDKDLVSWNTVISS 248
A + + + D D V W++V+ S
Sbjct: 415 RAYETIKNMNMDADSVLWSSVLGS 438
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/659 (35%), Positives = 363/659 (55%), Gaps = 38/659 (5%)
Query: 214 LVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPD 273
++T Y + R+ +A LF +D+VSWN++IS + A+ M + V
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV--- 128
Query: 274 GVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVF 333
V+ + + C R+GK L + ++ +++V Y K D +F
Sbjct: 129 -VSWTAMVNGC-----FRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLF 182
Query: 334 DGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAF 393
+ + V W MI G +NE EA+ LF M+ S + ++ AC AF
Sbjct: 183 KQMPGKNVISWTTMICGLDQNERSGEALDLFKNML-RCCIKSTSRPFTCVITACANAPAF 241
Query: 394 LDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGY 453
+HG ++K GF ++YV +L+ Y+ RI S+ +F + W +++GY
Sbjct: 242 HMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGY 301
Query: 454 VVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHA 513
+ +H+DAL++ M R + PN T + L C E+H
Sbjct: 302 SLNKKHEDALSIFSGMLRNS-----------ILPNQSTFASGLNSCSALGTLDWGKEMHG 350
Query: 514 YALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEE 573
A+K L TD VG++L+ MY+ G +N + VF ++ +++++WN +I+ HG+G+
Sbjct: 351 VAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKW 410
Query: 574 ALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKA--NHGIEPSS 631
A +F +M+ NKE P+E+T+ + +ACSH G +++G LF+ M + NH I+
Sbjct: 411 AFVIFGQMI---RLNKE--PDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINH-IDRKI 464
Query: 632 DHYACLVDLLGRSGRVEEAYKLIKTM---PSNMKKVDAWSSLLGACKIHQNLEVGEIAAK 688
HY C+VD+LGR G+++EA +LI+ M P+ M W +LL AC++H +++ GE AA
Sbjct: 465 QHYTCMVDILGRCGKLKEAEELIERMVVKPNEM----VWLALLSACRMHSDVDRGEKAAA 520
Query: 689 QLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFL 748
+ L+ ++ YVLLSNIY+SAG W +R KMK+ G+ K+PG SW+ R + H+F
Sbjct: 521 AIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFF 580
Query: 749 AGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFG 808
+GD P ++E LE L +++++ GY PD LHDV+DE+KE ML HSERLAIAFG
Sbjct: 581 SGD--QPHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFG 638
Query: 809 LLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
L+NT G+ + V KNLRVC DCH K IS +V REI+LRD RFHHF+NGTCSCGDYW
Sbjct: 639 LINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 169/347 (48%), Gaps = 12/347 (3%)
Query: 108 AVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXX 167
A NS+V+ Y + G + A +F ++ ++ +SW +MI +
Sbjct: 160 AAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRC 219
Query: 168 NVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGD-WRTFTNNALVTMYAKLGRIDE 226
+ TS + AC+N +G QVH + G + + + +L+T YA RI +
Sbjct: 220 CIKSTSRPFTCVITACANA-PAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGD 278
Query: 227 AKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH 286
++ +F + + W ++S S N + E+AL ML++ + P+ T AS L +CS
Sbjct: 279 SRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSA 338
Query: 287 LEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNA 346
L L GKE+HG A++ L ++FVG++LV MY + + VF I ++++ WN+
Sbjct: 339 LGTLDWGKEMHGVAVK-LGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNS 397
Query: 347 MIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKR 406
+I G A++ A +F +M+ + P+ T + LL AC C FL+K Y +
Sbjct: 398 IIVGCAQHGRGKWAFVIFGQMI-RLNKEPDEITFTGLLSACSHC-GFLEKGRKLFYYMSS 455
Query: 407 GFEK-DKYVQN--ALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMI 450
G D+ +Q+ ++D+ R G+++ ++ + R +V N M+
Sbjct: 456 GINHIDRKIQHYTCMVDILGRCGKLKEAEELI----ERMVVKPNEMV 498
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 185/436 (42%), Gaps = 47/436 (10%)
Query: 296 IHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNE 355
IHG R+ + L+ + ++ D+ R VF+ + V+++ MI GY R+
Sbjct: 21 IHGKCYRSFSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSN 80
Query: 356 FDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVK---RGFEKDK 412
+A+ LF EM + + +S++ CV C G VK E+
Sbjct: 81 RLVDALNLFDEMPVR-----DVVSWNSMISGCVEC-------GDMNTAVKLFDEMPERSV 128
Query: 413 YVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQR- 471
A+++ R G+++ ++ +F M +D +WN+M+ GY+ G+ DDAL L M
Sbjct: 129 VSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGK 188
Query: 472 ----------GQDDEYEDDESIPL---------KPNSVTLMTVLPGCXXXXXXXXXXEIH 512
G D E++ L K S V+ C ++H
Sbjct: 189 NVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVH 248
Query: 513 AYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGE 572
+K + V ++LI YA C + SR VFD+ V W L+ Y ++ K E
Sbjct: 249 GLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHE 308
Query: 573 EALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSD 632
+AL +F M+ I PN+ T+ + +CS G +D G + H + G+E +
Sbjct: 309 DALSIFSGML-----RNSILPNQSTFASGLNSCSALGTLDWGKEM-HGVAVKLGLETDAF 362
Query: 633 HYACLVDLLGRSGRVEEAYKL-IKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLL 691
LV + SG V +A + IK K + +W+S++ C H + + Q++
Sbjct: 363 VGNSLVVMYSDSGNVNDAVSVFIKIFK---KSIVSWNSIIVGCAQHGRGKWAFVIFGQMI 419
Query: 692 VL--EPNVASHYVLLS 705
L EP+ + LLS
Sbjct: 420 RLNKEPDEITFTGLLS 435
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 133/300 (44%), Gaps = 5/300 (1%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+A+ + NM+ + + F V+ A A ++G Q+HG + K G+ V+ SL
Sbjct: 208 EALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEY-VSASL 266
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
+ Y C + + VFD W ++++ ++ P
Sbjct: 267 ITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQ 326
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFG 232
T S ++CS L L GK++H + G + F N+LV MY+ G +++A ++F
Sbjct: 327 STFASGLNSCSAL-GTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFI 385
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRT 292
K +VSWN++I +Q+ R + A + M++ PD +T L ACSH L
Sbjct: 386 KIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEK 445
Query: 293 GKEIHGYALRNTDLIDNSFVG-SALVDMYCNCKKADKGRWVFDG-ILRRTVAVWNAMIAG 350
G+++ Y + ID + +VD+ C K + + + +++ VW A+++
Sbjct: 446 GRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSA 505
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 107/252 (42%), Gaps = 32/252 (12%)
Query: 389 RCKAFLDKEGIHGYVVKRGFEKDKYVQN--ALMDMYSRMGRIEISKSIFGSMDRRDIVSW 446
R +AF IHG R F QN L+ + RI+ ++ +F + + +
Sbjct: 11 RFRAFSISHVIHGKCY-RSFSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLY 69
Query: 447 NTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXX 506
MITGY R DALNL +M P++ + V+ +++ GC
Sbjct: 70 TKMITGYTRSNRLVDALNLFDEM--------------PVR-DVVSWNSMISGCVECGDMN 114
Query: 507 XXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYG 566
++ + + +A+++ + G ++ + +F QMP ++ WN ++ Y
Sbjct: 115 TAVKL----FDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYL 170
Query: 567 MHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHG 626
GK ++AL+LF++M + N +++ + + E L+LF M
Sbjct: 171 QFGKVDDALKLFKQMPGK---------NVISWTTMICGLDQNERSGEALDLFKNM-LRCC 220
Query: 627 IEPSSDHYACLV 638
I+ +S + C++
Sbjct: 221 IKSTSRPFTCVI 232
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/660 (36%), Positives = 353/660 (53%), Gaps = 42/660 (6%)
Query: 212 NALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVR 271
N LV+ Y K I EA+ +F L ++++VSW ++ Q EA + M +
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEV 142
Query: 272 PDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRW 331
V ++ G+ L + + + + ++ C + D+ R
Sbjct: 143 SWTVMFGG---------LIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARL 193
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVR-C 390
+FD + R V W MI GY +N D A KLF M +++ + S L L +
Sbjct: 194 IFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDA 253
Query: 391 KAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMI 450
+ F + + K NA++ + +G I ++ +F M+ RD +W MI
Sbjct: 254 EEFFEVMPM----------KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMI 303
Query: 451 TGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXE 510
Y G +AL+L MQ+ ++P+ +L+++L C +
Sbjct: 304 KAYERKGFELEALDLFAQMQKQG-----------VRPSFPSLISILSVCATLASLQYGRQ 352
Query: 511 IHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGK 570
+HA+ ++ + D+ V S L+ MY KCG L +++VFD+ ++++I WN +I Y HG
Sbjct: 353 VHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGL 412
Query: 571 GEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPS 630
GEEAL++F M + PN+VT IAI ACS++G ++EGL +F +M++ + P+
Sbjct: 413 GEEALKIFHEM-----PSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPT 467
Query: 631 SDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDA--WSSLLGACKIHQNLEVGEIAAK 688
+HY+C VD+LGR+G+V++A +LI++M K DA W +LLGACK H L++ E+AAK
Sbjct: 468 VEHYSCTVDMLGRAGQVDKAMELIESMTI---KPDATVWGALLGACKTHSRLDLAEVAAK 524
Query: 689 QLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFL 748
+L EP+ A YVLLS+I +S W +RK M+ V K PGCSWIE +VH F
Sbjct: 525 KLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFT 584
Query: 749 AGD-ASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAF 807
G +HP+ + LE +R+ GY PD S VLHDVD+EEK L HSERLA+A+
Sbjct: 585 RGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAY 644
Query: 808 GLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
GLL P G IRV KNLRVC DCH A K ISK+ +REIILRD RFHHF NG CSC DYW
Sbjct: 645 GLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 131/282 (46%), Gaps = 8/282 (2%)
Query: 107 VAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXX 166
V N+++ +G+ G+++ A VFD + DRD+ +W MI A R
Sbjct: 265 VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQK 324
Query: 167 XNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFR-NGDWRTFTNNALVTMYAKLGRID 225
V P+ +L+SI C+ L L G+QVHA+ R D + + L+TMY K G +
Sbjct: 325 QGVRPSFPSLISILSVCATLAS-LQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELV 383
Query: 226 EAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACS 285
+AK +F F KD++ WN++IS + + EEAL + M SG P+ VTL + L ACS
Sbjct: 384 KAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS 443
Query: 286 HLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI-LRRTVAVW 344
+ L G EI + S VDM + DK + + + ++ VW
Sbjct: 444 YAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVW 503
Query: 345 NAMIAG---YARNEFDDEAIKLFIEMVYESDFTPNSTTLSSL 383
A++ ++R + + A K E E D LSS+
Sbjct: 504 GALLGACKTHSRLDLAEVAAKKLFE--NEPDNAGTYVLLSSI 543
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 7/229 (3%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R + W ++ + L+A+ +A M GV P + ++L A + L G+Q+
Sbjct: 294 RDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQV 353
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
H H+ + + V VA+ L+ MY KCG+L A VFDR S +D + WNS+I+
Sbjct: 354 HAHLVRCQF-DDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGL 412
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACS---NLRDGLSLGKQVHAYTFRNGDWRTFT 210
P TL++I ACS L +GL + + + + ++
Sbjct: 413 GEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYS 472
Query: 211 NNALVTMYAKLGRIDEAKALFGLFDDK-DLVSWNTVISSLSQNDRFEEA 258
V M + G++D+A L K D W ++ + + R + A
Sbjct: 473 --CTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLA 519
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 112/504 (22%), Positives = 195/504 (38%), Gaps = 97/504 (19%)
Query: 301 LRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEA 360
LR T L S + K ++ R FD + + + WN++++GY N EA
Sbjct: 8 LRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEA 67
Query: 361 IKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMD 420
+LF EM N + + L+ ++ + ++ + + E++ A++
Sbjct: 68 RQLFDEMSER-----NVVSWNGLVSGYIKNRMIVEARNVFELMP----ERNVVSWTAMVK 118
Query: 421 MYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQD------ 474
Y + G + ++S+F M R+ VSW M G + GR D A L+DM +D
Sbjct: 119 GYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARK-LYDMMPVKDVVASTN 177
Query: 475 ------DEYEDDESIPL-----KPNSVTLMTVLPGCXXXXXXXXXXEIH----------- 512
E DE+ + + N VT T++ G ++
Sbjct: 178 MIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSW 237
Query: 513 -----AYALKQKLA-----------TDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVI 556
Y L ++ + +A+I + + G ++ +R VFD M R+
Sbjct: 238 TSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNA 297
Query: 557 TWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEG-- 614
TW +I AY G EAL+LF +M + +RP+ + I+I + C+ + G
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQM-----QKQGVRPSFPSLISILSVCATLASLQYGRQ 352
Query: 615 ----------------LNLFHTM--------KANHGIEPSSDH----YACLVDLLGRSGR 646
++ TM KA + S + ++ G
Sbjct: 353 VHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGL 412
Query: 647 VEEAYKLIKTMPSN--MKKVDAWSSLLGAC----KIHQNLEVGEIAAKQLLVLEPNVASH 700
EEA K+ MPS+ M ++L AC K+ + LE+ E + V P V H
Sbjct: 413 GEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCV-TPTV-EH 470
Query: 701 YVLLSNIYSSAGLWDQAMDIRKKM 724
Y ++ AG D+AM++ + M
Sbjct: 471 YSCTVDMLGRAGQVDKAMELIESM 494
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/536 (38%), Positives = 323/536 (60%), Gaps = 17/536 (3%)
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCK 391
+F GI +N MI GY +EA+ + EM+ + P++ T LL AC R K
Sbjct: 88 IFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGN-EPDNFTYPCLLKACTRLK 146
Query: 392 AFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMIT 451
+ + + IHG V K G E D +VQN+L++MY R G +E+S ++F ++ + SW++M++
Sbjct: 147 SIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVS 206
Query: 452 GYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEI 511
G + L L RG E LK +++ L C I
Sbjct: 207 ARAGMGMWSECLLLF----RGMCSETN------LKAEESGMVSALLACANTGALNLGMSI 256
Query: 512 HAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKG 571
H + L+ +I V ++L+DMY KCGCL+ + +F +M RN +T++ +I +HG+G
Sbjct: 257 HGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEG 316
Query: 572 EEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSS 631
E AL +F +M+ E + P+ V Y+++ ACSHSG+V EG +F M +EP++
Sbjct: 317 ESALRMFSKMIKEG-----LEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTA 371
Query: 632 DHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLL 691
+HY CLVDLLGR+G +EEA + I+++P V W + L C++ QN+E+G+IAA++LL
Sbjct: 372 EHYGCLVDLLGRAGLLEEALETIQSIPIEKNDV-IWRTFLSQCRVRQNIELGQIAAQELL 430
Query: 692 VLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGD 751
L + Y+L+SN+YS +WD R ++ G+++ PG S +E + + H+F++ D
Sbjct: 431 KLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQD 490
Query: 752 ASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLN 811
SHP+ KE+++ L + +++ EGY PD + +L +VD+EEK+ L GHS+++AIAFGLL
Sbjct: 491 RSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLY 550
Query: 812 TPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
TPPG+ I++ +NLR+C+DCH TK IS I +REI++RD RFH F+ GTCSC DYW
Sbjct: 551 TPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 139/271 (51%), Gaps = 4/271 (1%)
Query: 51 SFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVA 110
SF +A+ Y M+ G PDNF +P +LKA + + GKQIHG VFK G + V V
Sbjct: 112 SFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEA-DVFVQ 170
Query: 111 NSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAA-ACRFXXXXXXXXXXXXXXXXNV 169
NSL+NMYG+CG++ + VF+++ + SW+SM++A A N+
Sbjct: 171 NSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNL 230
Query: 170 DPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRN-GDWRTFTNNALVTMYAKLGRIDEAK 228
+VS AC+N L+LG +H + RN + +LV MY K G +D+A
Sbjct: 231 KAEESGMVSALLACAN-TGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKAL 289
Query: 229 ALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLE 288
+F + ++ ++++ +IS L+ + E AL M++ G+ PD V S L ACSH
Sbjct: 290 HIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSG 349
Query: 289 MLRTGKEIHGYALRNTDLIDNSFVGSALVDM 319
+++ G+ + L+ + + LVD+
Sbjct: 350 LVKEGRRVFAEMLKEGKVEPTAEHYGCLVDL 380
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 161/341 (47%), Gaps = 14/341 (4%)
Query: 224 IDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPA 283
++ A ++F DD +NT+I FEEAL F M+Q G PD T L A
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 284 CSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAV 343
C+ L+ +R GK+IHG + L + FV ++L++MY C + + VF+ + +T A
Sbjct: 142 CTRLKSIREGKQIHGQVFK-LGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAAS 200
Query: 344 WNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYV 403
W++M++ A E + LF M E++ + + S L AC A IHG++
Sbjct: 201 WSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFL 260
Query: 404 VKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDAL 463
++ E + VQ +L+DMY + G ++ + IF M++R+ ++++ MI+G + G + AL
Sbjct: 261 LRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESAL 320
Query: 464 NLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQ-KLAT 522
+ M + L+P+ V ++VL C + A LK+ K+
Sbjct: 321 RMFSKMIKE-----------GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEP 369
Query: 523 DIAVGSALIDMYAKCGCLNLSRIVFDQMPT-RNVITWNVLI 562
L+D+ + G L + +P +N + W +
Sbjct: 370 TAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFL 410
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/677 (34%), Positives = 364/677 (53%), Gaps = 23/677 (3%)
Query: 91 KQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVS-WNSMIAAAC 149
K +H + G V + SL+N+Y C D A HVF+ R V WNS+++
Sbjct: 24 KLVHQRILTLGL-RRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYS 82
Query: 150 RFXXXXXXXXXXXXXXXXNV-DPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGD-WR 207
+ ++ P SFT ++ A L LG+ +H ++G
Sbjct: 83 KNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREF-LGRMIHTLVVKSGYVCD 141
Query: 208 TFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQ 267
++LV MYAK + + +F ++D+ SWNTVIS Q+ E+AL M
Sbjct: 142 VVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMES 201
Query: 268 SGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKAD 327
SG P+ V+L A+ ACS L L GKEIH ++ +D +V SALVDMY C +
Sbjct: 202 SGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDE-YVNSALVDMYGKCDCLE 260
Query: 328 KGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
R VF + R+++ WN+MI GY +++ M+ E P+ TTL+S+L AC
Sbjct: 261 VAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT-RPSQTTLTSILMAC 319
Query: 388 VRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWN 447
R + L + IHGYV++ D YV +L+D+Y + G +++++F + SWN
Sbjct: 320 SRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWN 379
Query: 448 TMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXX 507
MI+ Y+ G A+ + Y+ S+ +KP+ VT +VLP C
Sbjct: 380 VMISSYISVGNWFKAVEV-----------YDQMVSVGVKPDVVTFTSVLPACSQLAALEK 428
Query: 508 XXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGM 567
+IH + +L TD + SAL+DMY+KCG + +F+ +P ++V++W V+I AYG
Sbjct: 429 GKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGS 488
Query: 568 HGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGI 627
HG+ EAL F M ++P+ VT +A+ +AC H+G++DEGL F M++ +GI
Sbjct: 489 HGQPREALYQFDEM-----QKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGI 543
Query: 628 EPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAA 687
EP +HY+C++D+LGR+GR+ EAY++I+ P + S+L AC +H +G+ A
Sbjct: 544 EPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIA 603
Query: 688 KQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKF 747
+ L+ P+ AS Y++L N+Y+S WD A +R KMKEMG+RK+PGCSWIE D+V F
Sbjct: 604 RLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHF 663
Query: 748 LAGDASHPQSKELHEYL 764
A D SH +++ ++E L
Sbjct: 664 FAEDRSHLRAENVYECL 680
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 145/466 (31%), Positives = 225/466 (48%), Gaps = 23/466 (4%)
Query: 39 WIDHLRLQAQSSSFLQAISTYANMVAAGV-PPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
W + +++S F + + ++ + PD+F FP V+KA + LG+ IH V
Sbjct: 74 WNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLV 133
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
K GY V VA+SLV MY K + VFD + +RD SWN++I+ +
Sbjct: 134 VKSGYV-CDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKA 192
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVT 216
+P S +L ACS L L GK++H + G + + N+ALV
Sbjct: 193 LELFGRMESSGFEPNSVSLTVAISACSRLL-WLERGKEIHRKCVKKGFELDEYVNSALVD 251
Query: 217 MYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVT 276
MY K ++ A+ +F K LV+WN++I + + L M+ G RP T
Sbjct: 252 MYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTT 311
Query: 277 LASALPACSHLEMLRTGKEIHGYALR---NTDLIDNSFVGSALVDMYCNCKKADKGRWVF 333
L S L ACS L GK IHGY +R N D+ +V +L+D+Y C +A+ VF
Sbjct: 312 LTSILMACSRSRNLLHGKFIHGYVIRSVVNADI----YVNCSLIDLYFKCGEANLAETVF 367
Query: 334 DGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAF 393
+ WN MI+ Y +A++++ +MV P+ T +S+LPAC + A
Sbjct: 368 SKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMV-SVGVKPDVVTFTSVLPACSQLAAL 426
Query: 394 LDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGY 453
+ IH + + E D+ + +AL+DMYS+ G + + IF S+ ++D+VSW MI+ Y
Sbjct: 427 EKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAY 486
Query: 454 VVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
G+ +AL +MQ+ LKP+ VTL+ VL C
Sbjct: 487 GSHGQPREALYQFDEMQK-----------FGLKPDGVTLLAVLSAC 521
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 51 SFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVA 110
++ +A+ Y MV+ GV PD F +VL A + + L GKQIH + + T +
Sbjct: 390 NWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISE-SRLETDELLL 448
Query: 111 NSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD 170
++L++MY KCG+ A +F+ I +D VSW MI+A +
Sbjct: 449 SALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLK 508
Query: 171 PTSFTLVSIAHACSN---LRDGLSLGKQVHA 198
P TL+++ AC + + +GL Q+ +
Sbjct: 509 PDGVTLLAVLSACGHAGLIDEGLKFFSQMRS 539
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 256/732 (34%), Positives = 386/732 (52%), Gaps = 31/732 (4%)
Query: 55 AISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLV 114
AI + NM + V +VL A V +L+LG +H K G AS ++ V +SLV
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLAS-NIYVGSSLV 369
Query: 115 NMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSF 174
+MY KC + A VF+ + +++ V WN+MI + F
Sbjct: 370 SMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDF 429
Query: 175 TLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRT-FTNNALVTMYAKLGRIDEAKALFGL 233
T S+ C+ D L +G Q H+ + + F NALV MYAK G +++A+ +F
Sbjct: 430 TFTSLLSTCAASHD-LEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFER 488
Query: 234 FDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTG 293
D+D V+WNT+I S Q++ EA M G+ DG LAS L AC+H+ L G
Sbjct: 489 MCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG 548
Query: 294 KEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYAR 353
K++H +++ L + GS+L+DMY C R VF + +V NA+IAGY++
Sbjct: 549 KQVHCLSVK-CGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ 607
Query: 354 NEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKD-K 412
N + EA+ LF EM+ P+ T ++++ AC + ++ HG + KRGF + +
Sbjct: 608 NNLE-EAVVLFQEMLTRG-VNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGE 665
Query: 413 YVQNALMDMYSRMGRIEISKSIFGSMDR-RDIVSWNTMITGYVVCGRHDDALNLLHDMQR 471
Y+ +L+ MY + + ++F + + IV W M++G+ G +++AL +M+
Sbjct: 666 YLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRH 725
Query: 472 GQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALI 531
+ P+ T +TVL C IH+ D + LI
Sbjct: 726 D-----------GVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLI 774
Query: 532 DMYAKCGCLNLSRIVFDQMPTR-NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKE 590
DMYAKCG + S VFD+M R NV++WN LI Y +G E+AL++F M
Sbjct: 775 DMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSM-----RQSH 829
Query: 591 IRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEA 650
I P+E+T++ + ACSH+G V +G +F M +GIE DH AC+VDLLGR G ++EA
Sbjct: 830 IMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEA 889
Query: 651 YKLIKTMPSNMKKVDA--WSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIY 708
I+ N+K DA WSSLLGAC+IH + GEI+A++L+ LEP +S YVLLSNIY
Sbjct: 890 DDFIEA--QNLKP-DARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIY 946
Query: 709 SSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLL 768
+S G W++A +RK M++ GV+K PG SWI+ H F AGD SH + ++ +LE+L
Sbjct: 947 ASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLY 1006
Query: 769 QRMRKEGYV-PD 779
M+ + V PD
Sbjct: 1007 DLMKDDAVVNPD 1018
Score = 235 bits (600), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 167/638 (26%), Positives = 278/638 (43%), Gaps = 62/638 (9%)
Query: 37 SAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGH 96
+AW L + + + + ++ ++ + P+ F F VL A ++ G+QIH
Sbjct: 126 TAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCS 185
Query: 97 VFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXX 156
+ K G S +LV+MY KC ++ A VF+ I D + V W + + +
Sbjct: 186 MIKMGLERNSYC-GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEE 244
Query: 157 XXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVT 216
P V++ +
Sbjct: 245 AVLVFERMRDEGHRPDHLAFVTV-----------------------------------IN 269
Query: 217 MYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVT 276
Y +LG++ +A+ LFG D+V+WN +IS + A+ + ++M +S V+ T
Sbjct: 270 TYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRST 329
Query: 277 LASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI 336
L S L A + L G +H A++ L N +VGS+LV MY C+K + VF+ +
Sbjct: 330 LGSVLSAIGIVANLDLGLVVHAEAIK-LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEAL 388
Query: 337 LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDK 396
+ WNAMI GYA N + ++LF++M S + + T +SLL C
Sbjct: 389 EEKNDVFWNAMIRGYAHNGESHKVMELFMDM-KSSGYNIDDFTFTSLLSTCAASHDLEMG 447
Query: 397 EGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVC 456
H ++K+ K+ +V NAL+DMY++ G +E ++ IF M RD V+WNT+I YV
Sbjct: 448 SQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQD 507
Query: 457 GRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYAL 516
+A +L M + + L + L C ++H ++
Sbjct: 508 ENESEAFDLFKRMNL-----------CGIVSDGACLASTLKACTHVHGLYQGKQVHCLSV 556
Query: 517 KQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALE 576
K L D+ GS+LIDMY+KCG + +R VF +P +V++ N LI Y + EEA+
Sbjct: 557 KCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVV 615
Query: 577 LFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYAC 636
LF+ M+ + + P+E+T+ I AC + G FH G ++
Sbjct: 616 LFQEML-----TRGVNPSEITFATIVEACHKPESLTLGTQ-FHGQITKRGFSSEGEYLG- 668
Query: 637 LVDLLG---RSGRVEEAYKLIKTMPSNMKKVDAWSSLL 671
+ LLG S + EA L + S K + W+ ++
Sbjct: 669 -ISLLGMYMNSRGMTEACALFSELSSP-KSIVLWTGMM 704
Score = 227 bits (579), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 148/546 (27%), Positives = 266/546 (48%), Gaps = 23/546 (4%)
Query: 39 WIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVF 98
W +R A + + + + +M ++G D+F F ++L A +DL +G Q H +
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 99 KFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXX 158
K A ++ V N+LV+MY KCG L A +F+R+ DRD+V+WN++I + +
Sbjct: 456 KKKLAK-NLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAF 514
Query: 159 XXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTM 217
+ L S AC+++ GL GKQVH + + G D T ++L+ M
Sbjct: 515 DLFKRMNLCGIVSDGACLASTLKACTHVH-GLYQGKQVHCLSVKCGLDRDLHTGSSLIDM 573
Query: 218 YAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTL 277
Y+K G I +A+ +F + +VS N +I+ SQN+ EEA++ ML GV P +T
Sbjct: 574 YSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITF 632
Query: 278 ASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGIL 337
A+ + AC E L G + HG + + ++G +L+ MY N + + +F +
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELS 692
Query: 338 R-RTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDK 396
+++ +W M++G+++N F +EA+K + EM ++ P+ T ++L C + +
Sbjct: 693 SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDG-VLPDQATFVTVLRVCSVLSSLREG 751
Query: 397 EGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRR-DIVSWNTMITGYVV 455
IH + + D+ N L+DMY++ G ++ S +F M RR ++VSWN++I GY
Sbjct: 752 RAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAK 811
Query: 456 CGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYA 515
G +DAL + M++ + P+ +T + VL C +I
Sbjct: 812 NGYAEDALKIFDSMRQSH-----------IMPDEITFLGVLTACSHAGKVSDGRKIFEMM 860
Query: 516 LKQ-KLATDIAVGSALIDMYAKCGCLNLS-RIVFDQMPTRNVITWNVLIMAYGMHG---K 570
+ Q + + + ++D+ + G L + + Q + W+ L+ A +HG +
Sbjct: 861 IGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIR 920
Query: 571 GEEALE 576
GE + E
Sbjct: 921 GEISAE 926
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 138/564 (24%), Positives = 256/564 (45%), Gaps = 27/564 (4%)
Query: 112 SLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDP 171
+++N Y + G L A +F +S D V+WN MI+ + +V
Sbjct: 266 TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKS 325
Query: 172 TSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKAL 230
T TL S+ A + + L LG VHA + G + ++LV+MY+K +++ A +
Sbjct: 326 TRSTLGSVLSAIGIVAN-LDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKV 384
Query: 231 FGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEML 290
F ++K+ V WN +I + N + + M SG D T S L C+ L
Sbjct: 385 FEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDL 444
Query: 291 RTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAG 350
G + H ++ L N FVG+ALVDMY C + R +F+ + R WN +I
Sbjct: 445 EMGSQFHSIIIKKK-LAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGS 503
Query: 351 YARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEK 410
Y ++E + EA LF M + L+S L AC + +H VK G ++
Sbjct: 504 YVQDENESEAFDLFKRMNL-CGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDR 562
Query: 411 DKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDM- 469
D + ++L+DMYS+ G I+ ++ +F S+ +VS N +I GY ++A+ L +M
Sbjct: 563 DLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEML 621
Query: 470 QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIA-VGS 528
RG + P+ +T T++ C + H K+ +++ +G
Sbjct: 622 TRG------------VNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGI 669
Query: 529 ALIDMYAKCGCLNLSRIVFDQMPT-RNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDS 587
+L+ MY + + +F ++ + ++++ W ++ + +G EEAL+ ++ M
Sbjct: 670 SLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEM-----R 724
Query: 588 NKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRV 647
+ + P++ T++ + CS + EG H++ + + L+D+ + G +
Sbjct: 725 HDGVLPDQATFVTVLRVCSVLSSLREG-RAIHSLIFHLAHDLDELTSNTLIDMYAKCGDM 783
Query: 648 EEAYKLIKTMPSNMKKVDAWSSLL 671
+ + ++ M V +W+SL+
Sbjct: 784 KGSSQVFDEMRRR-SNVVSWNSLI 806
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 224/486 (46%), Gaps = 58/486 (11%)
Query: 189 GLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVIS 247
L +GK VH+ + G D NA+V +YAK ++ A+ F F +KD+ +WN+++S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLS 133
Query: 248 SLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLI 307
S + + L + ++ + P+ T + L C+ + G++IH ++ L
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK-MGLE 192
Query: 308 DNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEM 367
NS+ G ALVDMY C + R VF+ I+ W + +GY + +EA+ +F M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 368 VYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGR 427
E G D +++ Y R+G+
Sbjct: 253 RDE------------------------------------GHRPDHLAFVTVINTYIRLGK 276
Query: 428 IEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKP 487
++ ++ +FG M D+V+WN MI+G+ G A+ +M++ +K
Sbjct: 277 LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSS-----------VKS 325
Query: 488 NSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVF 547
TL +VL +HA A+K LA++I VGS+L+ MY+KC + + VF
Sbjct: 326 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 548 DQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSH 607
+ + +N + WN +I Y +G+ + +ELF M K S I ++ T+ ++ + C+
Sbjct: 386 EALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM---KSSGYNI--DDFTFTSLLSTCAA 440
Query: 608 SGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAW 667
S ++ G + FH++ + + LVD+ + G +E+A ++ + M + W
Sbjct: 441 SHDLEMG-SQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD--RDNVTW 497
Query: 668 SSLLGA 673
++++G+
Sbjct: 498 NTIIGS 503
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 197/449 (43%), Gaps = 24/449 (5%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+A + M G+ D + LKA V+ L GKQ+H K G + +SL
Sbjct: 512 EAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGL-DRDLHTGSSL 570
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
++MY KCG + A VF + + VS N++IA + V+P+
Sbjct: 571 IDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSE 629
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNG--DWRTFTNNALVTMYAKLGRIDEAKALF 231
T +I AC + L+LG Q H + G + +L+ MY + EA ALF
Sbjct: 630 ITFATIVEACHK-PESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALF 688
Query: 232 G-LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEML 290
L K +V W ++S SQN +EEAL F M GV PD T + L CS L L
Sbjct: 689 SELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSL 748
Query: 291 RTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRT-VAVWNAMIA 349
R G+ IH +D + L+DMY C VFD + RR+ V WN++I
Sbjct: 749 REGRAIHSLIFHLAHDLDE-LTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLIN 807
Query: 350 GYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVV-KRGF 408
GYA+N + ++A+K+F M +S P+ T +L AC D I ++ + G
Sbjct: 808 GYAKNGYAEDALKIFDSM-RQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGI 866
Query: 409 EKDKYVQNALMDMYSRMGRIEISKSIFGSMD-RRDIVSWNTMITGYVVCGRHDDALNLLH 467
E ++D+ R G ++ + + + + D W++++ C H D +
Sbjct: 867 EARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGA---CRIHGDDI---- 919
Query: 468 DMQRGQDDEYEDDESIPLKPNSVTLMTVL 496
RG E ++ I L+P + + +L
Sbjct: 920 ---RG---EISAEKLIELEPQNSSAYVLL 942
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 136/319 (42%), Gaps = 32/319 (10%)
Query: 397 EGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVC 456
+ +H + G + + + NA++D+Y++ ++ ++ F +++ D+ +WN+M++ Y
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLSMYSSI 138
Query: 457 GRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYAL 516
G+ L + Q + PN T VL C +IH +
Sbjct: 139 GKPGKVLRSFVSLFENQ-----------IFPNKFTFSIVLSTCARETNVEFGRQIHCSMI 187
Query: 517 KQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALE 576
K L + G AL+DMYAKC ++ +R VF+ + N + W L Y G EEA+
Sbjct: 188 KMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVL 247
Query: 577 LFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYAC 636
+F RM E RP+ + ++ + G + + LF M + P +
Sbjct: 248 VFERMRDEGH-----RPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNV 297
Query: 637 LVDLLGRSGRVEEAYKLIKTM-PSNMKKV-DAWSSLLGACKIHQNLEVGEIAAKQLLVLE 694
++ G+ G A + M S++K S+L A I NL++G + + + L
Sbjct: 298 MISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG 357
Query: 695 PNVASHYVLLSNIYSSAGL 713
L SNIY + L
Sbjct: 358 --------LASNIYVGSSL 368
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 269/845 (31%), Positives = 419/845 (49%), Gaps = 105/845 (12%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+ W + ++ + + + + M+ GV PD+F FP +L+ A D+ GK I
Sbjct: 144 RNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVI 203
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
H V K G S+ + V+NS++ +Y KCG+L A F R+ +RD ++WNS++ A C+
Sbjct: 204 HSVVIKLG-MSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGK 262
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNA 213
+ P T W N
Sbjct: 263 HEEAVELVKEMEKEGISPGLVT------------------------------W-----NI 287
Query: 214 LVTMYAKLGRIDEAKAL------FGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQ 267
L+ Y +LG+ D A L FG+ D+ +W +IS L N +AL M
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKMETFGI--TADVFTWTAMISGLIHNGMRYQALDMFRKMFL 345
Query: 268 SGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKAD 327
+GV P+ VT+ SA+ ACS L+++ G E+H A++ ID+ VG++LVDMY C K +
Sbjct: 346 AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVK-MGFIDDVLVGNSLVDMYSKCGKLE 404
Query: 328 KGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
R VFD + + V WN+MI GY + + +A +LF M +++ PN T +++
Sbjct: 405 DARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRM-QDANLRPNIITWNTM---- 459
Query: 388 VRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRM---GRIEISKSIFGSMDRRDIV 444
I GY +K G E + MD++ RM G+++ R+
Sbjct: 460 -----------ISGY-IKNGDEGEA------MDLFQRMEKDGKVQ-----------RNTA 490
Query: 445 SWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXX 504
+WN +I GY+ G+ D+AL L MQ + PNSVT++++LP C
Sbjct: 491 TWNLIIAGYIQNGKKDEALELFRKMQFSR-----------FMPNSVTILSLLPACANLLG 539
Query: 505 XXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMA 564
EIH L++ L AV +AL D YAK G + SR +F M T+++ITWN LI
Sbjct: 540 AKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGG 599
Query: 565 YGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKAN 624
Y +HG AL LF +M + I PN T +I A G VDEG +F+++ +
Sbjct: 600 YVLHGSYGPALALFNQM-----KTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIAND 654
Query: 625 HGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGE 684
+ I P+ +H + +V L GR+ R+EEA + I+ M + + W S L C+IH ++++
Sbjct: 655 YHIIPALEHCSAMVYLYGRANRLEEALQFIQEM-NIQSETPIWESFLTGCRIHGDIDMAI 713
Query: 685 IAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEV 744
AA+ L LEP + ++S IY+ ++++ K ++ ++K G SWIE R+ +
Sbjct: 714 HAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLI 773
Query: 745 HKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLA 804
H F GD QSK + L L+++M + D +++E +E HSE+ A
Sbjct: 774 HTFTTGD----QSKLCTDVLYPLVEKMSRLDNRSDQYNGELWIEEEGREETCGIHSEKFA 829
Query: 805 IAFGLLNTPPG--TTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCS 862
+AFGL+++ TTIR+ KNLR+C DCH K++SK +I+L D R HHF+NG CS
Sbjct: 830 MAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCS 889
Query: 863 CGDYW 867
C DYW
Sbjct: 890 CKDYW 894
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 269/841 (31%), Positives = 428/841 (50%), Gaps = 72/841 (8%)
Query: 73 AFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDR 132
F +L+ +A +D+ + K +H K T + N+L++ Y K G A VF
Sbjct: 82 GFFYLLRLSAQYHDVEVTKAVHASFLKLREEKTRLG--NALISTYLKLGFPREAILVFVS 139
Query: 133 ISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXN-VDPTSFTLVSIAHACSNLRDGLS 191
+S VS+ ++I+ R V P +T V+I AC + S
Sbjct: 140 LSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRV-SRFS 198
Query: 192 LGKQVHAYTFRNGDWRT-FTNNALVTMYAK--LGRIDEAKALFGLFDDKDLVSWNTVISS 248
LG Q+H ++G + F +N+L+++Y K D+ LF +D+ SWNTV+SS
Sbjct: 199 LGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSS 258
Query: 249 LSQNDRFEEALLFLYHMLQ-SGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDL- 306
L + + +A Y M + G D TL++ L +C+ +L G+E+HG A+R +
Sbjct: 259 LVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQ 318
Query: 307 ---IDNSFVG--------------------------SALVDMYCNCKKADKGRWVFDGIL 337
++N+ +G + ++ Y + D +F +
Sbjct: 319 ELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVT 378
Query: 338 RRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYE----SDFTPNSTTLSSLLPACVRCKAF 393
+ +NA++AG+ RN +A+KLF +M+ +DF+ L+S + AC
Sbjct: 379 EKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFS-----LTSAVDACGLVSEK 433
Query: 394 LDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIF----GSMDRRDIVSWNTM 449
E IHG+ +K G + +Q AL+DM +R R+ ++ +F ++D + ++
Sbjct: 434 KVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATT--SI 491
Query: 450 ITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXX 509
I GY G D A++L H Q L + V+L +L C
Sbjct: 492 IGGYARNGLPDKAVSLFHRTLCEQK----------LFLDEVSLTLILAVCGTLGFREMGY 541
Query: 510 EIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHG 569
+IH YALK +DI++G++LI MYAKC + + +F+ M +VI+WN LI Y +
Sbjct: 542 QIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQR 601
Query: 570 KGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAAC--SHSGMVDEGLNLFHTMKANHGI 627
G+EAL L+ RM + KEI+P+ +T + +A + S + +LF +MK + I
Sbjct: 602 NGDEALALWSRM-----NEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDI 656
Query: 628 EPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAA 687
EP+++HY V +LG G +EEA I +MP +V +LL +C+IH N V + A
Sbjct: 657 EPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQ-PEVSVLRALLDSCRIHSNTSVAKRVA 715
Query: 688 KQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKF 747
K +L +P S Y+L SNIYS++G W ++ IR++M+E G RK P SWI H +++H F
Sbjct: 716 KLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSF 775
Query: 748 LAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAF 807
A D SHPQ K+++ LE L+ K GY P+T VL +VD+ K++ L HS +LA+ +
Sbjct: 776 HARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTY 835
Query: 808 GLLNT-PPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDY 866
G+L++ G +RV KN+ +C DCH K+IS +V REI+LRD FHHF NG CSC D
Sbjct: 836 GILSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDL 895
Query: 867 W 867
W
Sbjct: 896 W 896
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 224/487 (45%), Gaps = 62/487 (12%)
Query: 53 LQAISTYANMVAAG-VPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVAN 111
++A+ + M AG V P+ + F A+L A V+ +LG QIHG + K G+ + SV V+N
Sbjct: 162 IEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLN-SVFVSN 220
Query: 112 SLVNMYGK-----CGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXX 166
SL+++Y K C D+ +FD I RD SWN+++++ +
Sbjct: 221 SLMSLYDKDSGSSCDDVL---KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNR 277
Query: 167 XN---VDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFT-NNALVTMYAK-- 220
VD SFTL ++ +C++ L G+++H R G + + NNAL+ Y+K
Sbjct: 278 VEGFGVD--SFTLSTLLSSCTD-SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFW 334
Query: 221 -----------------------------LGRIDEAKALFGLFDDKDLVSWNTVISSLSQ 251
G +D A +F +K+ +++N +++ +
Sbjct: 335 DMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCR 394
Query: 252 NDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSF 311
N +AL MLQ GV +L SA+ AC + + ++IHG+ ++ N
Sbjct: 395 NGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAF-NPC 453
Query: 312 VGSALVDMYCNCKKADKGRWVFDGILRR--TVAVWNAMIAGYARNEFDDEAIKLFIEMVY 369
+ +AL+DM C++ +FD + ++I GYARN D+A+ LF +
Sbjct: 454 IQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLC 513
Query: 370 ESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIE 429
E + +L+ +L C IH Y +K G+ D + N+L+ MY++ +
Sbjct: 514 EQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSD 573
Query: 430 ISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNS 489
+ IF +M D++SWN++I+ Y++ D+AL L M + +KP+
Sbjct: 574 DAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKE-----------IKPDI 622
Query: 490 VTLMTVL 496
+TL V+
Sbjct: 623 ITLTLVI 629
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/471 (41%), Positives = 296/471 (62%), Gaps = 16/471 (3%)
Query: 397 EGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVC 456
E IH V++ GF YVQN+L+ +Y+ G + + +F M +D+V+WN++I G+
Sbjct: 8 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 67
Query: 457 GRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYAL 516
G+ ++AL L +M S +KP+ T++++L C +H Y +
Sbjct: 68 GKPEEALALYTEMN-----------SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 116
Query: 517 KQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALE 576
K L ++ + L+D+YA+CG + ++ +FD+M +N ++W LI+ ++G G+EA+E
Sbjct: 117 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 176
Query: 577 LFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYAC 636
LF+ M +S + + P E+T++ I ACSH GMV EG F M+ + IEP +H+ C
Sbjct: 177 LFKYM----ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC 232
Query: 637 LVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPN 696
+VDLL R+G+V++AY+ IK+MP V W +LLGAC +H + ++ E A Q+L LEPN
Sbjct: 233 MVDLLARAGQVKKAYEYIKSMPMQ-PNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPN 291
Query: 697 VASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQ 756
+ YVLLSN+Y+S W IRK+M GV+K PG S +E + VH+FL GD SHPQ
Sbjct: 292 HSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQ 351
Query: 757 SKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGT 816
S ++ L+ + R+R EGYVP S V DV++EEKE + HSE++AIAF L++TP +
Sbjct: 352 SDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERS 411
Query: 817 TIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
I V KNLRVC DCH+A K +SK+ +REI++RD RFHHF+NG+CSC DYW
Sbjct: 412 PITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 139 bits (350), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 119/212 (56%), Gaps = 4/212 (1%)
Query: 86 DLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMI 145
D+ LG+ IH V + G+ S + V NSL+++Y CGD+A A+ VFD++ ++D V+WNS+I
Sbjct: 3 DVRLGETIHSVVIRSGFGSL-IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 61
Query: 146 AAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGD 205
+ P FT+VS+ AC+ + L+LGK+VH Y + G
Sbjct: 62 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKI-GALTLGKRVHVYMIKVGL 120
Query: 206 WRTF-TNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEAL-LFLY 263
R ++N L+ +YA+ GR++EAK LF DK+ VSW ++I L+ N +EA+ LF Y
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 264 HMLQSGVRPDGVTLASALPACSHLEMLRTGKE 295
G+ P +T L ACSH M++ G E
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFE 212
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 145/278 (52%), Gaps = 8/278 (2%)
Query: 190 LSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISS 248
+ LG+ +H+ R+G + N+L+ +YA G + A +F +KDLV+WN+VI+
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 249 LSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLID 308
++N + EEAL M G++PDG T+ S L AC+ + L GK +H Y ++ L
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VGLTR 122
Query: 309 NSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMV 368
N + L+D+Y C + ++ + +FD ++ + W ++I G A N F EAI+LF M
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 369 YESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGY-VVKRGFEKDKYVQN--ALMDMYSRM 425
P T +L AC C + KEG + ++ ++ + +++ ++D+ +R
Sbjct: 183 STEGLLPCEITFVGILYACSHCG--MVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 426 GRIEISKSIFGSMDRR-DIVSWNTMITGYVVCGRHDDA 462
G+++ + SM + ++V W T++ V G D A
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 146/303 (48%), Gaps = 19/303 (6%)
Query: 290 LRTGKEIHGYALRNT--DLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAM 347
+R G+ IH +R+ LI +V ++L+ +Y NC VFD + + + WN++
Sbjct: 4 VRLGETIHSVVIRSGFGSLI---YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 348 IAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRG 407
I G+A N +EA+ L+ EM P+ T+ SLL AC + A + +H Y++K G
Sbjct: 61 INGFAENGKPEEALALYTEM-NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 119
Query: 408 FEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLH 467
++ + N L+D+Y+R GR+E +K++F M ++ VSW ++I G V G +A+ L
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 179
Query: 468 DMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQ-KLATDIAV 526
M+ + L P +T + +L C E ++ K+ I
Sbjct: 180 YMESTEG----------LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEH 229
Query: 527 GSALIDMYAKCGCLNLSRIVFDQMPTR-NVITWNVLIMAYGMHGKGEEALELFRRMVAEK 585
++D+ A+ G + + MP + NV+ W L+ A +HG + A E R + +
Sbjct: 230 FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA-EFARIQILQL 288
Query: 586 DSN 588
+ N
Sbjct: 289 EPN 291
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 10/219 (4%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
AW + A++ +A++ Y M + G+ PD F ++L A A + L LGK++H ++
Sbjct: 56 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 115
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAA-ACRFXXXXX 156
K G + ++ +N L+++Y +CG + A +FD + D++ VSW S+I A
Sbjct: 116 IKVGL-TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA 174
Query: 157 XXXXXXXXXXXNVDPTSFTLVSIAHACSN---LRDGLSLGKQV-HAYTFRNGDWRTFTNN 212
+ P T V I +ACS+ +++G +++ Y + R
Sbjct: 175 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKI---EPRIEHFG 231
Query: 213 ALVTMYAKLGRIDEA-KALFGLFDDKDLVSWNTVISSLS 250
+V + A+ G++ +A + + + ++V W T++ + +
Sbjct: 232 CMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACT 270
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 409 bits (1050), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/663 (34%), Positives = 360/663 (54%), Gaps = 68/663 (10%)
Query: 207 RTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQN-DRFEEALLFLYHM 265
+ F N ++ + G ID A +F K+ ++WN+++ +S++ R EA + +
Sbjct: 60 QIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEA----HQL 115
Query: 266 LQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKK 325
PD +F + ++ Y
Sbjct: 116 FDEIPEPD------------------------------------TFSYNIMLSCYVRNVN 139
Query: 326 ADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLP 385
+K + FD + + A WN MI GYAR ++A +LF M+ + N + ++++
Sbjct: 140 FEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK-----NEVSWNAMIS 194
Query: 386 ACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD-RRDIV 444
+ C RG A++ Y + ++E+++++F M +++V
Sbjct: 195 GYIECGDLEKASHFFKVAPVRGV----VAWTAMITGYMKAKKVELAEAMFKDMTVNKNLV 250
Query: 445 SWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXX 504
+WN MI+GYV R +D L L M +E I +PNS L + L GC
Sbjct: 251 TWNAMISGYVENSRPEDGLKLFRAML---------EEGI--RPNSSGLSSALLGCSELSA 299
Query: 505 XXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMA 564
+IH K L D+ ++LI MY KCG L + +F+ M ++V+ WN +I
Sbjct: 300 LQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISG 359
Query: 565 YGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKAN 624
Y HG ++AL LFR M+ K IRP+ +T++A+ AC+H+G+V+ G+ F +M +
Sbjct: 360 YAQHGNADKALCLFREMIDNK-----IRPDWITFVAVLLACNHAGLVNIGMAYFESMVRD 414
Query: 625 HGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGE 684
+ +EP DHY C+VDLLGR+G++EEA KLI++MP + +LLGAC++H+N+E+ E
Sbjct: 415 YKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR-PHAAVFGTLLGACRVHKNVELAE 473
Query: 685 IAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEV 744
AA++LL L A+ YV L+NIY+S W+ +RK+MKE V K PG SWIE R++V
Sbjct: 474 FAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKV 533
Query: 745 HKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLA 804
H F + D HP+ +H+ L+ L ++M+ GY P+ LH+V++E+KE +L HSE+LA
Sbjct: 534 HHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLA 593
Query: 805 IAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCG 864
+AFG + P G+ I+V KNLR+C DCH A KFIS+I REII+RD RFHHF++G+CSCG
Sbjct: 594 VAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCG 653
Query: 865 DYW 867
DYW
Sbjct: 654 DYW 656
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 34/216 (15%)
Query: 111 NSLVNMYGKCGDLAGAHHVF--------------------------------DRISDRDH 138
N++++ Y +CGDL A H F D +++
Sbjct: 190 NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNL 249
Query: 139 VSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHA 198
V+WN+MI+ + P S L S CS L L LG+Q+H
Sbjct: 250 VTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSEL-SALQLGRQIHQ 308
Query: 199 YTFRNGDWRTFTN-NALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEE 257
++ T +L++MY K G + +A LF + KD+V+WN +IS +Q+ ++
Sbjct: 309 IVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADK 368
Query: 258 ALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTG 293
AL M+ + +RPD +T + L AC+H ++ G
Sbjct: 369 ALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIG 404
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Query: 55 AISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLV 114
+ + M+ G+ P++ + L + ++ L LG+QIH V K V SL+
Sbjct: 268 GLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSK-STLCNDVTALTSLI 326
Query: 115 NMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSF 174
+MY KCG+L A +F+ + +D V+WN+MI+ + + P
Sbjct: 327 SMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWI 386
Query: 175 TLVSIAHACSN 185
T V++ AC++
Sbjct: 387 TFVAVLLACNH 397
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 407 bits (1047), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/618 (37%), Positives = 341/618 (55%), Gaps = 37/618 (5%)
Query: 276 TLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCN--CKKADKGRWVF 333
+L S L C +L + K+IHG+ LR L + ++ + L+ R V
Sbjct: 51 SLISKLDDCINLNQI---KQIHGHVLRK-GLDQSCYILTKLIRTLTKLGVPMDPYARRVI 106
Query: 334 DGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAF 393
+ + R +W A+I GYA DEAI ++ M E + TP S T S+LL AC K
Sbjct: 107 EPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKE-EITPVSFTFSALLKACGTMKDL 165
Query: 394 LDKEGIHGYVVK-RGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITG 452
H + RGF YV N ++DMY + I+ ++ +F M RD++SW +I
Sbjct: 166 NLGRQFHAQTFRLRGF-CFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAA 224
Query: 453 YVVCGRHDDALNLLHDM----------------QRGQDDE----YEDDESIPLKPNSVTL 492
Y G + A L + Q + E ++ E ++ + VT+
Sbjct: 225 YARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTV 284
Query: 493 MTVLPGCXXXXXXXXXXEIHAYALKQKLATD--IAVGSALIDMYAKCGCLNLSRIVFDQM 550
+ C A K + + +GSALIDMY+KCG + + VF M
Sbjct: 285 AGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM 344
Query: 551 PTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGM 610
+NV T++ +I+ HG+ +EAL LF MV + EI+PN VT++ ACSHSG+
Sbjct: 345 NNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQT----EIKPNTVTFVGALMACSHSGL 400
Query: 611 VDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSL 670
VD+G +F +M G++P+ DHY C+VDLLGR+GR++EA +LIKTM S W +L
Sbjct: 401 VDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTM-SVEPHGGVWGAL 459
Query: 671 LGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVR 730
LGAC+IH N E+ EIAA+ L LEP++ +Y+LLSN+Y+SAG W + +RK +KE G++
Sbjct: 460 LGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLK 519
Query: 731 KEPGCSWIEHRD-EVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDD 789
K P SW+ ++ ++HKF G+ +HP S ++ + LE L++R+ GY PD S V +DV D
Sbjct: 520 KTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSD 579
Query: 790 EEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRD 849
K +L H+E+LA+AF LL T +TI + KNLR+C DCH + S++ + II+RD
Sbjct: 580 NAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRD 639
Query: 850 VRRFHHFRNGTCSCGDYW 867
RFHHFR+G CSCGD+W
Sbjct: 640 NMRFHHFRSGDCSCGDFW 657
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 170/390 (43%), Gaps = 40/390 (10%)
Query: 86 DLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAG--AHHVFDRISDRDHVSWNS 143
+LN KQIHGHV + G S + L+ K G A V + + R+ W +
Sbjct: 61 NLNQIKQIHGHVLRKGL-DQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTA 119
Query: 144 MIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFR- 202
+I + P SFT ++ AC ++D L+LG+Q HA TFR
Sbjct: 120 VIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKD-LNLGRQFHAQTFRL 178
Query: 203 NGDWRTFTNNALVTMYAKLGRIDEAKALFG----------------------------LF 234
G + N ++ MY K ID A+ +F LF
Sbjct: 179 RGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELF 238
Query: 235 DD---KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLR 291
+ KD+V+W +++ +QN + +EAL + M +SG+R D VT+A + AC+ L +
Sbjct: 239 ESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASK 298
Query: 292 TGKEIHGYALRNT-DLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAG 350
A ++ D+ +GSAL+DMY C ++ VF + + V +++MI G
Sbjct: 299 YADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILG 358
Query: 351 YARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLD--KEGIHGYVVKRGF 408
A + EA+ LF MV +++ PN+ T L AC +D ++ G
Sbjct: 359 LATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSH-SGLVDQGRQVFDSMYQTFGV 417
Query: 409 EKDKYVQNALMDMYSRMGRIEISKSIFGSM 438
+ + ++D+ R GR++ + + +M
Sbjct: 418 QPTRDHYTCMVDLLGRTGRLQEALELIKTM 447
Score = 122 bits (307), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 196/474 (41%), Gaps = 106/474 (22%)
Query: 179 IAHACSNLRDGLSLG--KQVHAYTFRNG-DWRTFTNNALVTMYAKLG-RIDE-AKALFGL 233
++ S L D ++L KQ+H + R G D + L+ KLG +D A+ +
Sbjct: 49 VSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEP 108
Query: 234 FDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTG 293
++ W VI + +F+EA+ M + + P T ++ L AC ++ L G
Sbjct: 109 VQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLG 168
Query: 294 KEIHG--YALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTV---------- 341
++ H + LR + +VG+ ++DMY C+ D R VFD + R V
Sbjct: 169 RQFHAQTFRLRGFCFV---YVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAY 225
Query: 342 ---------------------AVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTL 380
W AM+ G+A+N EA++ F M +S + T+
Sbjct: 226 ARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRM-EKSGIRADEVTV 284
Query: 381 SSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYV--QNALMDMYSRMGRIEISKSIFGSM 438
+ + AC + A + K G+ +V +AL+DMYS+ G +E + ++F SM
Sbjct: 285 AGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM 344
Query: 439 DRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPG 498
+ +++ ++++MI G GR +AL+L H M + +KPN+VT + L
Sbjct: 345 NNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTE----------IKPNTVTFVGALMA 394
Query: 499 CXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQM-------P 551
C + G ++ R VFD M P
Sbjct: 395 C-----------------------------------SHSGLVDQGRQVFDSMYQTFGVQP 419
Query: 552 TRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAAC 605
TR+ T V ++ G G+ +EALEL + M E P+ + A+ AC
Sbjct: 420 TRDHYTCMVDLL--GRTGRLQEALELIKTMSVE--------PHGGVWGALLGAC 463
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/631 (36%), Positives = 344/631 (54%), Gaps = 64/631 (10%)
Query: 281 LPACSHLEMLRTGKEIHGYALRNTDL--IDNSFVGSALVDMYCNCKKADKGRWVFDGIL- 337
L C+H LR GKE+H L + L S++ +AL Y + + + +FD I
Sbjct: 13 LRHCAHRSFLRPGKELHA-VLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 338 -RRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDK 396
+ W +++ ++R ++KLF+EM + ++ L C + +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEM-RRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 397 EGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI---------------------------- 428
+ HG VK G V NALMDMY + G +
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 429 ---EISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPL 485
E + +F M R+ V+W M+ GY+ G + L LL +M + +
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMV------FRCGHGL-- 242
Query: 486 KPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLAT-------DIAVGSALIDMYAKCG 538
N VTL ++L C +H YALK+++ D+ VG+AL+DMYAKCG
Sbjct: 243 --NFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCG 300
Query: 539 CLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTY 598
++ S VF M RNV+TWN L MHGKG +++F +M+ +E++P+++T+
Sbjct: 301 NIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMI------REVKPDDLTF 354
Query: 599 IAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMP 658
A+ +ACSHSG+VDEG FH+++ +G+EP DHYAC+VDLLGR+G +EEA L++ MP
Sbjct: 355 TAVLSACSHSGIVDEGWRCFHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMP 413
Query: 659 SNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAM 718
+V SLLG+C +H +E+ E ++L+ + P + +L+SN+Y + G D A
Sbjct: 414 VPPNEV-VLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIAD 472
Query: 719 DIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVP 778
+R +++ G+RK PG S I D VH+F +GD SHP++KE++ L +++R+R GYVP
Sbjct: 473 GLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVP 532
Query: 779 DTSCVLH--DVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKF 836
D S ++ + D EEKE LC HSE+LA+ FGLL T P T + V KNLR+C DCH A K
Sbjct: 533 DVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKI 592
Query: 837 ISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
+SK+ DREII+RD RFH F+ G+CSC DYW
Sbjct: 593 VSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 156/353 (44%), Gaps = 45/353 (12%)
Query: 77 VLKAAAGVNDLNLGKQIHGHVFKFGYASTSVA-VANSLVNMYGKCGDLAGAHHVFDRI-- 133
+L+ A + L GK++H + G + ++N+L Y G++ A +FD I
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 134 SDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLG 193
S++D+V W +++++ R+ V+ ++V + C+ L D L
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLED-LGFA 130
Query: 194 KQVHAYTFRNGDWRTF-TNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQN 252
+Q H + G + NAL+ MY K G + E K +F ++K +VSW V+ ++ +
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 253 DRFE-------------------------------EALLFLYHML-QSGVRPDGVTLASA 280
+ E E L L M+ + G + VTL S
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 281 LPACSHLEMLRTGKEIHGYALRNTDLI------DNSFVGSALVDMYCNCKKADKGRWVFD 334
L AC+ L G+ +H YAL+ ++ D+ VG+ALVDMY C D VF
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 335 GILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
+ +R V WNA+ +G A + I +F +M+ E P+ T +++L AC
Sbjct: 311 LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE--VKPDDLTFTAVLSAC 361
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 175/456 (38%), Gaps = 80/456 (17%)
Query: 39 WIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVF 98
W L ++ + ++ + M V D+ + + A + DL +Q HG
Sbjct: 79 WTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAV 138
Query: 99 KFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXX 158
K G TSV V N+L++MYGKCG ++ +F+ + ++ VSW ++ ++
Sbjct: 139 KMGVL-TSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGR 197
Query: 159 XXXXXXXXXNVDPTSF--------------------------------TLVSIAHACSNL 186
N + TL S+ AC+
Sbjct: 198 EVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQ- 256
Query: 187 RDGLSLGKQVHAYTFRN----GDWRTF----TNNALVTMYAKLGRIDEAKALFGLFDDKD 238
L +G+ VH Y + G+ ++ ALV MYAK G ID + +F L ++
Sbjct: 257 SGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRN 316
Query: 239 LVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHG 298
+V+WN + S L+ + + + M++ V+PD +T + L ACSH
Sbjct: 317 VVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSH------------ 363
Query: 299 YALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDD 358
S +VD C + + F G L V + M+ R +
Sbjct: 364 ---------------SGIVDEGWRCFHSLR----FYG-LEPKVDHYACMVDLLGRAGLIE 403
Query: 359 EAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNAL 418
EA L EM PN L SLL +C E I +++ +Y Q +
Sbjct: 404 EAEILMREM----PVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEY-QILM 458
Query: 419 MDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYV 454
+MY GR +I+ + GS+ +R I + + YV
Sbjct: 459 SNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYV 494
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 405 bits (1041), Expect = e-113, Method: Compositional matrix adjust.
Identities = 236/707 (33%), Positives = 377/707 (53%), Gaps = 78/707 (11%)
Query: 171 PTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKAL 230
P +S+ HAC +D SL + VHA R G + LV+ + L D + ++
Sbjct: 27 PDESHFISLIHAC---KDTASL-RHVHAQILRRGVLSSRVAAQLVSCSSLLKSPDYSLSI 82
Query: 231 FGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEML 290
F ++++ N +I L++N RFE ++ ML+ GV+PD +T L + S L
Sbjct: 83 FRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFR 142
Query: 291 RTGKEIHGYALRNTDLID-NSFVGSALVDMYCNCKKADKGRWVF----DGILRRTVAVWN 345
G+ +H L+N +D +SFV +LVDMY + VF D I + ++ +WN
Sbjct: 143 WLGRALHAATLKN--FVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWN 200
Query: 346 AMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVK 405
+I GY R + A LF M NS + S+L I GYV
Sbjct: 201 VLINGYCRAKDMHMATTLFRSMPER-----NSGSWSTL---------------IKGYV-- 238
Query: 406 RGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNL 465
G + +K +F M +++VSW T+I G+ G ++ A++
Sbjct: 239 ------------------DSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAIST 280
Query: 466 LHDM-QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDI 524
+M ++G LKPN T+ VL C IH Y L + D
Sbjct: 281 YFEMLEKG------------LKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDR 328
Query: 525 AVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAE 584
A+G+AL+DMYAKCG L+ + VF M +++++W +I + +HG+ +A++ FR+M+
Sbjct: 329 AIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYS 388
Query: 585 KDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRS 644
+ +P+EV ++A+ AC +S VD GLN F +M+ ++ IEP+ HY +VDLLGR+
Sbjct: 389 GE-----KPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRA 443
Query: 645 GRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLL 704
G++ EA++L++ MP N + W++L ACK H+ E ++ LL L+P + Y+ L
Sbjct: 444 GKLNEAHELVENMPIN-PDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFL 502
Query: 705 SNIYSSAG----LWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKEL 760
++S G + + + ++K++KE + G S+IE +++KF AGD SH ++E+
Sbjct: 503 DKTHASKGNIQDVEKRRLSLQKRIKERSL----GWSYIELDGQLNKFSAGDYSHKLTQEI 558
Query: 761 HEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRV 820
L+ ++ ++GY P +HD+++EEKE + HSE+LA+ G L T PGTTIR+
Sbjct: 559 GLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRI 618
Query: 821 TKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
KNLR+C DCH K++SKI R+I+LRD R+FHHF++G CSCGDYW
Sbjct: 619 IKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 154 bits (388), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 195/445 (43%), Gaps = 77/445 (17%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+P +R +++ F ++ + M+ GV PD FP VLK+ + + LG+ +
Sbjct: 89 RNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRAL 148
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVF----DRISDRDHVSWNSMIAAAC 149
H K + V SLV+MY K G L A VF DRI + WN +I C
Sbjct: 149 HAATLK-NFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYC 207
Query: 150 RFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYT--FR----- 202
R K +H T FR
Sbjct: 208 R------------------------------------------AKDMHMATTLFRSMPER 225
Query: 203 -NGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLF 261
+G W T L+ Y G ++ AK LF L +K++VSW T+I+ SQ +E A+
Sbjct: 226 NSGSWST-----LIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAIST 280
Query: 262 LYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYC 321
+ ML+ G++P+ T+A+ L ACS L +G IHGY L N +D + +G+ALVDMY
Sbjct: 281 YFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRA-IGTALVDMYA 339
Query: 322 NCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLS 381
C + D VF + + + W AMI G+A + +AI+ F +M+Y + P+
Sbjct: 340 KCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGE-KPDEVVFL 398
Query: 382 SLLPACVRCKA------FLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIF 435
++L AC+ F D + Y ++ + YV ++D+ R G++ + +
Sbjct: 399 AVLTACLNSSEVDLGLNFFDSMRL-DYAIEPTLK--HYV--LVVDLLGRAGKLNEAHELV 453
Query: 436 GSMD-RRDIVSWNTMITGYVVCGRH 459
+M D+ +W + Y C H
Sbjct: 454 ENMPINPDLTTWAAL---YRACKAH 475
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/527 (23%), Positives = 220/527 (41%), Gaps = 70/527 (13%)
Query: 69 PDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHH 128
PD F +++ A L + +H + + G S+ VA + K D + +
Sbjct: 27 PDESHFISLIHACKDTASL---RHVHAQILRRGVLSSRVAAQLVSCSSLLKSPDYSLS-- 81
Query: 129 VFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRD 188
+F +R+ N++I V P T + + S L
Sbjct: 82 IFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKL-- 139
Query: 189 GLS-LGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVI 246
G LG+ +HA T +N D +F +LV MYAK G++ A F +F++
Sbjct: 140 GFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHA---FQVFEESP-------- 188
Query: 247 SSLSQNDRFEEALLFLYHMLQSG-VRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTD 305
DR ++ + ++++L +G R + +A+ L R+ E
Sbjct: 189 ------DRIKKESILIWNVLINGYCRAKDMHMATTL--------FRSMPE---------- 224
Query: 306 LIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFI 365
NS S L+ Y + + ++ + +F+ + + V W +I G+++ + AI +
Sbjct: 225 --RNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYF 282
Query: 366 EMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRM 425
EM+ E PN T++++L AC + A IHGY++ G + D+ + AL+DMY++
Sbjct: 283 EML-EKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKC 341
Query: 426 GRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPL 485
G ++ + ++F +M+ +DI+SW MI G+ V GR A+ M +
Sbjct: 342 GELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGE----------- 390
Query: 486 KPNSVTLMTVLPGCXXXXXXXXXXEIH-----AYALKQKLATDIAVGSALIDMYAKCGCL 540
KP+ V + VL C YA++ L + V +D+ + G L
Sbjct: 391 KPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLV----VDLLGRAGKL 446
Query: 541 NLSRIVFDQMPTR-NVITWNVLIMAYGMHGKGEEALELFRRMVAEKD 586
N + + + MP ++ TW L A H KG E + + E D
Sbjct: 447 NEAHELVENMPINPDLTTWAALYRACKAH-KGYRRAESVSQNLLELD 492
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/735 (31%), Positives = 395/735 (53%), Gaps = 39/735 (5%)
Query: 69 PDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDL-AGAH 127
P + F VL + D GK +H ++ K G ++ V N+LV+MY K G + A+
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTL-VGNALVSMYAKFGFIFPDAY 178
Query: 128 HVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLR 187
FD I+D+D VSWN++IA +P T+ ++ C+++
Sbjct: 179 TAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMD 238
Query: 188 DGLSL--GKQVHAYTFRNGDWRT--FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWN 243
++ G+Q+H+Y + +T F N+LV+ Y ++GRI+EA +LF KDLVSWN
Sbjct: 239 KNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWN 298
Query: 244 TVISSLSQNDRFEEALLFLYHMLQSG-VRPDGVTLASALPACSHLEMLRTGKEIHGYALR 302
VI+ + N + +A ++++ G V PD VT+ S LP C+ L L +GKEIH Y LR
Sbjct: 299 VVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILR 358
Query: 303 NTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIK 362
++ L++++ VG+AL+ Y W F + + + WNA++ +A + + +
Sbjct: 359 HSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLN 418
Query: 363 LFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGF---EKDKYVQNALM 419
L ++ E+ T +S T+ SLL C+ + + +HGY VK G E++ + NAL+
Sbjct: 419 LLHHLLNEA-ITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALL 477
Query: 420 DMYSRMGRIEISKSIF-GSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQ-------- 470
D Y++ G +E + IF G +RR +VS+N++++GYV G HDDA L +M
Sbjct: 478 DAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWS 537
Query: 471 ---RGQDDEYEDDESIP---------LKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQ 518
R + +E+I ++PN+VT+M +LP C + H Y ++
Sbjct: 538 LMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRG 597
Query: 519 KLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELF 578
L DI + L+D+YAKCG L + VF R+++ + ++ Y +HG+G+EAL ++
Sbjct: 598 GLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIY 656
Query: 579 RRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLV 638
M + I+P+ V + AC H+G++ +GL ++ +++ HG++P+ + YAC V
Sbjct: 657 SHM-----TESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAV 711
Query: 639 DLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVA 698
DL+ R GR+++AY + MP + W +LL AC + +++G A LL E +
Sbjct: 712 DLIARGGRLDDAYSFVTQMPVE-PNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDT 770
Query: 699 SHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSK 758
++VL+SN+Y++ W+ M++R MK+ ++K GCSW+E + + F++GD SHP+
Sbjct: 771 GNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRD 830
Query: 759 ELHEYLENLLQRMRK 773
+ + + L +M++
Sbjct: 831 SIFDLVNALYLQMKE 845
Score = 248 bits (632), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 176/638 (27%), Positives = 299/638 (46%), Gaps = 71/638 (11%)
Query: 65 AGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLA 124
+G D+ F V+KA A V+DL G+ +HG VFK G+ + S V+ S++NMY KC +
Sbjct: 15 SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACS-EVSKSVLNMYAKCRRMD 73
Query: 125 GAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACS 184
+F ++ D V WN ++ P+S T + C
Sbjct: 74 DCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCV 133
Query: 185 NLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRI-DEAKALFGLFDDKDLVSW 242
L D + GK +H+Y + G + T NALV+MYAK G I +A F DKD+VSW
Sbjct: 134 RLGDSYN-GKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSW 192
Query: 243 NTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLE---MLRTGKEIHGY 299
N +I+ S+N+ +A ML+ P+ T+A+ LP C+ ++ R+G++IH Y
Sbjct: 193 NAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSY 252
Query: 300 ALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDE 359
++ + L + FV ++LV Y + ++ +F + + + WN +IAGYA N +
Sbjct: 253 VVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFK 312
Query: 360 AIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGF-EKDKYVQNAL 418
A +LF +V++ D +P+S T+ S+LP C + + IH Y+++ + +D V NAL
Sbjct: 313 AFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNAL 372
Query: 419 MDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYE 478
+ Y+R G + F M +DI+SWN ++ + + Q +
Sbjct: 373 ISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQ---------FQFLNLLHHL 423
Query: 479 DDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATD---IAVGSALIDMYA 535
+E+I L +SVT++++L C E+H Y++K L D +G+AL+D YA
Sbjct: 424 LNEAITL--DSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYA 481
Query: 536 KCG--------CLNLS------------------------RIVFDQMPTRNVITWNVLIM 563
KCG L LS +++F +M T ++ TW++++
Sbjct: 482 KCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVR 541
Query: 564 AYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKA 623
Y EA+ +FR + A + +RPN VT + + C+ L H ++
Sbjct: 542 IYAESCCPNEAIGVFREIQA-----RGMRPNTVTIMNLLPVCAQ-------LASLHLVRQ 589
Query: 624 NHGIEPSSD-----HYACLVDLLGRSGRVEEAYKLIKT 656
HG L+D+ + G ++ AY + ++
Sbjct: 590 CHGYIIRGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQS 627
Score = 204 bits (518), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 163/576 (28%), Positives = 277/576 (48%), Gaps = 53/576 (9%)
Query: 175 TLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDEAKALFGL 233
+ + AC+++ D L+ G+ +H F+ G + + +++ MYAK R+D+ + +F
Sbjct: 23 VFLDVVKACASVSD-LTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQ 81
Query: 234 FDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTG 293
D D V WN V++ LS + E F +P VT A LP C L G
Sbjct: 82 MDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNG 141
Query: 294 KEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWV-FDGILRRTVAVWNAMIAGYA 352
K +H Y ++ L ++ VG+ALV MY + FDGI + V WNA+IAG++
Sbjct: 142 KSMHSYIIK-AGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFS 200
Query: 353 RNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC------VRCKAFLDKEGIHGYVVKR 406
N +A + F M+ E PN T++++LP C + C++ IH YVV+R
Sbjct: 201 ENNMMADAFRSFCLMLKEPT-EPNYATIANVLPVCASMDKNIACRS---GRQIHSYVVQR 256
Query: 407 GF-EKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNL 465
+ + +V N+L+ Y R+GRIE + S+F M +D+VSWN +I GY A L
Sbjct: 257 SWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQL 316
Query: 466 LHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQK-LATDI 524
H++ D + P+SVT++++LP C EIH+Y L+ L D
Sbjct: 317 FHNLVHKGD----------VSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDT 366
Query: 525 AVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAE 584
+VG+ALI YA+ G + + F M T+++I+WN ++ A+ K + L L ++ E
Sbjct: 367 SVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNE 426
Query: 585 KDSNKEIRPNEVTYIAIFAACSHS---GMVDEGLNLFHTMKANHGI-----EPSSDHYAC 636
I + VT +++ C + G V E H G+ EP +
Sbjct: 427 A-----ITLDSVTILSLLKFCINVQGIGKVKE----VHGYSVKAGLLHDEEEPKLGN--A 475
Query: 637 LVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPN 696
L+D + G VE A+K+ + S + + +++SLL + G Q+L E +
Sbjct: 476 LLDAYAKCGNVEYAHKIFLGL-SERRTLVSYNSLLSG-----YVNSGSHDDAQMLFTEMS 529
Query: 697 VA--SHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVR 730
+ + L+ IY+ + ++A+ + ++++ G+R
Sbjct: 530 TTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMR 565
Score = 154 bits (388), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 215/471 (45%), Gaps = 47/471 (9%)
Query: 47 AQSSSFLQAISTYANMVAAG-VPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYAST 105
A + + +A + N+V G V PD+ ++L A + DL GK+IH ++ + Y
Sbjct: 305 ASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLE 364
Query: 106 SVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXX 165
+V N+L++ Y + GD + A+ F +S +D +SWN+++ A
Sbjct: 365 DTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLL 424
Query: 166 XXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG----DWRTFTNNALVTMYAKL 221
+ S T++S+ C N++ G+ K+VH Y+ + G + NAL+ YAK
Sbjct: 425 NEAITLDSVTILSLLKFCINVQ-GIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKC 483
Query: 222 GRIDEAKALF-GLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQS------------ 268
G ++ A +F GL + + LVS+N+++S + ++A + M +
Sbjct: 484 GNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIY 543
Query: 269 -------------------GVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDN 309
G+RP+ VT+ + LP C+ L L ++ HGY +R L D
Sbjct: 544 AESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRG-GLGDI 602
Query: 310 SFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVY 369
G+ L+D+Y C VF RR + ++ AM+AGYA + EA+ ++ M
Sbjct: 603 RLKGT-LLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMT- 660
Query: 370 ESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKR---GFEKDKYVQNALMDMYSRMG 426
ES+ P+ ++++L AC C A L ++G+ Y R G + +D+ +R G
Sbjct: 661 ESNIKPDHVFITTMLTAC--CHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGG 718
Query: 427 RIEISKSIFGSMDRRDIVS-WNTMITGYVVCGRHDDALNLLHDMQRGQDDE 476
R++ + S M + W T++ R D ++ + + + + D+
Sbjct: 719 RLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDD 769
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 200/414 (48%), Gaps = 26/414 (6%)
Query: 266 LQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKK 325
L SG D + AC+ + L +G+ +HG + I S V ++++MY C++
Sbjct: 13 LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFK-LGHIACSEVSKSVLNMYAKCRR 71
Query: 326 ADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLP 385
D + +F + VWN ++ G + + E ++ F M + + P+S T + +LP
Sbjct: 72 MDDCQKMFRQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPSSVTFAIVLP 130
Query: 386 ACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI-EISKSIFGSMDRRDIV 444
CVR + + +H Y++K G EKD V NAL+ MY++ G I + + F + +D+V
Sbjct: 131 LCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVV 190
Query: 445 SWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXX-- 502
SWN +I G+ DA M + P +PN T+ VLP C
Sbjct: 191 SWNAIIAGFSENNMMADAFRSFCLMLKE-----------PTEPNYATIANVLPVCASMDK 239
Query: 503 -XXXXXXXEIHAYALKQK-LATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNV 560
+IH+Y +++ L T + V ++L+ Y + G + + +F +M ++++++WNV
Sbjct: 240 NIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNV 299
Query: 561 LIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLF-H 619
+I Y + + +A +LF +V + D + P+ VT I+I C+ + G + +
Sbjct: 300 VIAGYASNCEWFKAFQLFHNLVHKGD----VSPDSVTIISILPVCAQLTDLASGKEIHSY 355
Query: 620 TMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGA 673
++ ++ +E +S A L+ R G AY M + K + +W+++L A
Sbjct: 356 ILRHSYLLEDTSVGNA-LISFYARFGDTSAAYWAFSLMST--KDIISWNAILDA 406
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 105/237 (44%), Gaps = 10/237 (4%)
Query: 37 SAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGH 96
+ W +R+ A+S +AI + + A G+ P+ +L A + L+L +Q HG+
Sbjct: 534 TTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGY 593
Query: 97 VFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXX 156
+ + G + + +L+++Y KCG L A+ VF + RD V + +M+A
Sbjct: 594 IIRGGLG--DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKE 651
Query: 157 XXXXXXXXXXXNVDPTSFTLVSIAHACSN---LRDGLSLGKQVHAYTFRNGDWRTFTNNA 213
N+ P + ++ AC + ++DGL + + +G T A
Sbjct: 652 ALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTV---HGMKPTMEQYA 708
Query: 214 L-VTMYAKLGRIDEAKALFGLFD-DKDLVSWNTVISSLSQNDRFEEALLFLYHMLQS 268
V + A+ GR+D+A + + + W T++ + + +R + H+LQ+
Sbjct: 709 CAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQA 765
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 232/710 (32%), Positives = 387/710 (54%), Gaps = 28/710 (3%)
Query: 69 PDNFAFPAVLKAAAGVNDLN--LGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGA 126
P+ + + ++A +G++ + Q+ + K G+ V V L++ Y K G++ A
Sbjct: 144 PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGF-DRDVYVGTLLIDFYLKDGNIDYA 202
Query: 127 HHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNL 186
VFD + ++ V+W +MI+ + NV P + L ++ ACS L
Sbjct: 203 RLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSIL 262
Query: 187 RDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTV 245
L GKQ+HA+ R G + N L+ Y K GR+ A LF +K+++SW T+
Sbjct: 263 -PFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTL 321
Query: 246 ISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTD 305
+S QN +EA+ M + G++PD +S L +C+ L L G ++H Y ++ +
Sbjct: 322 LSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIK-AN 380
Query: 306 LIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYAR--NEFD-DEAIK 362
L ++S+V ++L+DMY C R VFD V ++NAMI GY+R +++ EA+
Sbjct: 381 LGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALN 440
Query: 363 LFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMY 422
+F +M + P+ T SLL A + + IHG + K G D + +AL+D+Y
Sbjct: 441 IFRDMRFRL-IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVY 499
Query: 423 SRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDES 482
S ++ S+ +F M +D+V WN+M GYV +++ALNL ++Q ++
Sbjct: 500 SNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRE-------- 551
Query: 483 IPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNL 542
+P+ T ++ E H LK+ L + + +AL+DMYAKCG
Sbjct: 552 ---RPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPED 608
Query: 543 SRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIF 602
+ FD +R+V+ WN +I +Y HG+G++AL++ +M++E I PN +T++ +
Sbjct: 609 AHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEG-----IEPNYITFVGVL 663
Query: 603 AACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMK 662
+ACSH+G+V++GL F M GIEP ++HY C+V LLGR+GR+ +A +LI+ MP+
Sbjct: 664 SACSHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPA 722
Query: 663 KVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRK 722
+ W SLL C N+E+ E AA+ ++ +P + + +LSNIY+S G+W +A +R+
Sbjct: 723 AI-VWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRE 781
Query: 723 KMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMR 772
+MK GV KEPG SWI EVH FL+ D SH ++ +++E L++LL ++R
Sbjct: 782 RMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 268 bits (686), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 183/667 (27%), Positives = 313/667 (46%), Gaps = 31/667 (4%)
Query: 74 FPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRI 133
F +L+ A + L+ +HG + +G ++N L+N+Y + G + A VF+++
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGL-ELDTYLSNILINLYSRAGGMVYARKVFEKM 105
Query: 134 SDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD-PTSFTLVSIAHACSNLRD-GLS 191
+R+ VSW++M++A D P + L S ACS L G
Sbjct: 106 PERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRW 165
Query: 192 LGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLS 250
+ Q+ ++ ++G D + L+ Y K G ID A+ +F +K V+W T+IS
Sbjct: 166 MVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCV 225
Query: 251 QNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNS 310
+ R +L Y +++ V PDG L++ L ACS L L GK+IH + LR +D S
Sbjct: 226 KMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDAS 285
Query: 311 FVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYE 370
+ + L+D Y C + +F+G+ + + W +++GY +N EA++LF M +
Sbjct: 286 LM-NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMS-K 343
Query: 371 SDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEI 430
P+ SS+L +C A +H Y +K D YV N+L+DMY++ +
Sbjct: 344 FGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTD 403
Query: 431 SKSIFGSMDRRDIVSWNTMITGYVVCGRH---DDALNLLHDMQRGQDDEYEDDESIPLKP 487
++ +F D+V +N MI GY G +ALN+ DM+ ++P
Sbjct: 404 ARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL-----------IRP 452
Query: 488 NSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVF 547
+ +T +++L +IH K L DI GSALID+Y+ C CL SR+VF
Sbjct: 453 SLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVF 512
Query: 548 DQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSH 607
D+M ++++ WN + Y + EEAL LF + ++ RP+E T+ + A +
Sbjct: 513 DEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRE-----RPDEFTFANMVTAAGN 567
Query: 608 SGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAW 667
V G FH G+E + L+D+ + G E+A+K + S + V W
Sbjct: 568 LASVQLGQE-FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAAS--RDVVCW 624
Query: 668 SSLLGACKIHQNLEVGEIAAKQLLV--LEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMK 725
+S++ + H + ++++ +EPN + +LS S AGL + + + M
Sbjct: 625 NSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSAC-SHAGLVEDGLKQFELML 683
Query: 726 EMGVRKE 732
G+ E
Sbjct: 684 RFGIEPE 690
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 201/422 (47%), Gaps = 13/422 (3%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W L Q++ +A+ + +M G+ PD +A ++L + A ++ L G Q+H +
Sbjct: 317 SWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYT 376
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
K + S V NSL++MY KC L A VFD + D V +N+MI R
Sbjct: 377 IKANLGNDSY-VTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWEL 435
Query: 158 XXXXXXXXXXN---VDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNA 213
+ P+ T VS+ A ++L L L KQ+H F+ G + F +A
Sbjct: 436 HEALNIFRDMRFRLIRPSLLTFVSLLRASASL-TSLGLSKQIHGLMFKYGLNLDIFAGSA 494
Query: 214 LVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPD 273
L+ +Y+ + +++ +F KDLV WN++ + Q EEAL + S RPD
Sbjct: 495 LIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPD 554
Query: 274 GVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVF 333
T A+ + A +L ++ G+E H L+ L N ++ +AL+DMY C + F
Sbjct: 555 EFTFANMVTAAGNLASVQLGQEFHCQLLKR-GLECNPYITNALLDMYAKCGSPEDAHKAF 613
Query: 334 DGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAF 393
D R V WN++I+ YA + +A+++ +M+ E PN T +L AC A
Sbjct: 614 DSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEG-IEPNYITFVGVLSAC--SHAG 670
Query: 394 LDKEGIHGY--VVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRD-IVSWNTMI 450
L ++G+ + +++ G E + ++ + R GR+ ++ + M + + W +++
Sbjct: 671 LVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLL 730
Query: 451 TG 452
+G
Sbjct: 731 SG 732
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 242/836 (28%), Positives = 430/836 (51%), Gaps = 43/836 (5%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+ AW + +S F A+S + M+A+G P+ F F +V+++ AG+ D++ G ++
Sbjct: 87 RTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRV 146
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
HG V K G+ SV V +SL ++Y KCG A +F + + D +SW MI++
Sbjct: 147 HGSVIKTGFEGNSV-VGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARK 205
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNN 212
V P FT V + A S L GL GK +H+ G
Sbjct: 206 WREALQFYSEMVKAGVPPNEFTFVKLLGASSFL--GLEFGKTIHSNIIVRGIPLNVVLKT 263
Query: 213 ALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRP 272
+LV Y++ ++++A + ++D+ W +V+S +N R +EA+ M G++P
Sbjct: 264 SLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQP 323
Query: 273 DGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKAD-KGRW 331
+ T ++ L CS + L GK+IH ++ D++ VG+ALVDMY C ++ +
Sbjct: 324 NNFTYSAILSLCSAVRSLDFGKQIHSQTIK-VGFEDSTDVGNALVDMYMKCSASEVEASR 382
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCK 391
VF ++ V W +I G + F + L +EMV + + PN TLS +L AC + +
Sbjct: 383 VFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMV-KREVEPNVVTLSGVLRACSKLR 441
Query: 392 AFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMIT 451
IH Y+++R + + V N+L+D Y+ +++ + ++ SM RRD +++ +++T
Sbjct: 442 HVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVT 501
Query: 452 GYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEI 511
+ G+H+ AL++++ M Y D ++ + ++L + +
Sbjct: 502 RFNELGKHEMALSVINYM-------YGDG----IRMDQLSLPGFISASANLGALETGKHL 550
Query: 512 HAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKG 571
H Y++K + +V ++L+DMY+KCG L ++ VF+++ T +V++WN L+ +G
Sbjct: 551 HCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFI 610
Query: 572 EEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSS 631
AL F M KE P+ VT++ + +ACS+ + D GL F MK + IEP
Sbjct: 611 SSALSAFEEM-----RMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQV 665
Query: 632 DHYACLVDLLGRSGRVEEAYKLIKTM---PSNMKKVDAWSSLLGACKIHQNLEVGEIAAK 688
+HY LV +LGR+GR+EEA +++TM P+ M + +LL AC+ NL +GE A
Sbjct: 666 EHYVHLVGILGRAGRLEEATGVVETMHLKPNAM----IFKTLLRACRYRGNLSLGEDMAN 721
Query: 689 QLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFL 748
+ L L P+ + Y+LL+++Y +G + A R M E + K+ G S +E + +VH F+
Sbjct: 722 KGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFV 781
Query: 749 AGDASH-PQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAF 807
+ D + ++ ++ +E++ + +++ G E + HS + A+ +
Sbjct: 782 SEDVTRVDKTNGIYAEIESIKEEIKRFG---------SPYRGNENASF---HSAKQAVVY 829
Query: 808 GLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSC 863
G + P + V KN +C DCH ++++VD++I +RD + H F+NG CSC
Sbjct: 830 GFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 244 bits (623), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 183/648 (28%), Positives = 309/648 (47%), Gaps = 31/648 (4%)
Query: 85 NDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSM 144
N +G IH V KFG ++ + N+L+++Y K + A +FD +S R +W M
Sbjct: 37 NSSRIGLHIHCPVIKFGLLE-NLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVM 95
Query: 145 IAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG 204
I+A + P FT S+ +C+ LRD +S G +VH + G
Sbjct: 96 ISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRD-ISYGGRVHGSVIKTG 154
Query: 205 -DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLY 263
+ + ++L +Y+K G+ EA LF + D +SW +ISSL ++ EAL F
Sbjct: 155 FEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYS 214
Query: 264 HMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHG-YALRNTDLIDNSFVGSALVDMYCN 322
M+++GV P+ T L A S L L GK IH +R L N + ++LVD Y
Sbjct: 215 EMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPL--NVVLKTSLVDFYSQ 271
Query: 323 CKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSS 382
K + V + + V +W ++++G+ RN EA+ F+EM PN+ T S+
Sbjct: 272 FSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM-RSLGLQPNNFTYSA 330
Query: 383 LLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKS-IFGSMDRR 441
+L C ++ + IH +K GFE V NAL+DMY + E+ S +FG+M
Sbjct: 331 ILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSP 390
Query: 442 DIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXX 501
++VSW T+I G V G D LL +M + + ++PN VTL VL C
Sbjct: 391 NVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE-----------VEPNVVTLSGVLRACSK 439
Query: 502 XXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVL 561
EIHAY L++ + ++ VG++L+D YA ++ + V M R+ IT+ L
Sbjct: 440 LRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSL 499
Query: 562 IMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTM 621
+ + GK E AL + M + IR ++++ +A ++ G ++ G +L H
Sbjct: 500 VTRFNELGKHEMALSVINYMYGDG-----IRMDQLSLPGFISASANLGALETGKHL-HCY 553
Query: 622 KANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLE 681
G ++ LVD+ + G +E+A K+ + + + V +W+ L+ + +
Sbjct: 554 SVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT--PDVVSWNGLVSGLASNGFIS 611
Query: 682 VGEIAAKQLLV--LEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEM 727
A +++ + EP+ + +LLS S+ L D ++ + MK++
Sbjct: 612 SALSAFEEMRMKETEPDSVTFLILLSAC-SNGRLTDLGLEYFQVMKKI 658
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/734 (31%), Positives = 374/734 (50%), Gaps = 66/734 (8%)
Query: 111 NSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD 170
N+++ Y L+ A +F ++ +SWN++I+ C+ +
Sbjct: 63 NTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK 122
Query: 171 PTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKA 229
P +TL S+ C++L L G+Q+H +T + G D N L+ MYA+ RI EA+
Sbjct: 123 PNEYTLGSVLRMCTSLVLLLR-GEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEY 181
Query: 230 LFGLFD-DKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLE 288
LF + +K+ V+W ++++ SQN +A+ + + G + + T S L AC+ +
Sbjct: 182 LFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVS 241
Query: 289 MLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMI 348
R G ++H ++ + N +V SAL+DMY C++ + R + +G+ V WN+MI
Sbjct: 242 ACRVGVQVHCCIVK-SGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMI 300
Query: 349 AGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKE-----GIHGYV 403
G R EA+ +F M +E D + T+ P+ + C A E H +
Sbjct: 301 VGCVRQGLIGEALSMFGRM-HERDMKIDDFTI----PSILNCFALSRTEMKIASSAHCLI 355
Query: 404 VKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDAL 463
VK G+ K V NAL+DMY++ G ++ + +F M +D++SW ++TG G +D+AL
Sbjct: 356 VKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEAL 415
Query: 464 NLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATD 523
L +M+ G + P+ + +VL ++H +K +
Sbjct: 416 KLFCNMRVG-----------GITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSS 464
Query: 524 IAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVA 583
++V ++L+ MY KCG L + ++F+ M R++ITW LI+ Y +G
Sbjct: 465 LSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG-------------- 510
Query: 584 EKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGR 643
++++ F +M+ +GI P +HYAC++DL GR
Sbjct: 511 --------------------------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGR 544
Query: 644 SGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVL 703
SG + +L+ M W ++L A + H N+E GE AAK L+ LEPN A YV
Sbjct: 545 SGDFVKVEQLLHQMEVE-PDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQ 603
Query: 704 LSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEY 763
LSN+YS+AG D+A ++R+ MK + KEPGCSW+E + +VH F++ D HP+ E++
Sbjct: 604 LSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSK 663
Query: 764 LENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKN 823
++ ++ +++ GY D S LHD+D E KE L HSE+LA+AFGLL P G IR+ KN
Sbjct: 664 VDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKN 723
Query: 824 LRVCNDCHVATKFI 837
LRVC DCH A K +
Sbjct: 724 LRVCGDCHSAMKLL 737
Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 232/464 (50%), Gaps = 21/464 (4%)
Query: 209 FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQS 268
FT N ++ Y+ R+ +A+ LF K+ +SWN +IS ++ EA + M
Sbjct: 60 FTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSD 119
Query: 269 GVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADK 328
G++P+ TL S L C+ L +L G++IHG+ ++ +D + V + L+ MY CK+ +
Sbjct: 120 GIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVV-NGLLAMYAQCKRISE 178
Query: 329 GRWVFDGIL-RRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
++F+ + + W +M+ GY++N F +AI+ F ++ E + N T S+L AC
Sbjct: 179 AEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGN-QSNQYTFPSVLTAC 237
Query: 388 VRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWN 447
A +H +VK GF+ + YVQ+AL+DMY++ +E ++++ M+ D+VSWN
Sbjct: 238 ASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWN 297
Query: 448 TMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXX 507
+MI G V G +AL++ M + D DD +IP N L
Sbjct: 298 SMIVGCVRQGLIGEALSMFGRMH--ERDMKIDDFTIPSILNCFAL--------SRTEMKI 347
Query: 508 XXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGM 567
H +K AT V +AL+DMYAK G ++ + VF+ M ++VI+W L+
Sbjct: 348 ASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTH 407
Query: 568 HGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGI 627
+G +EAL+LF M I P+++ ++ +A + +++ G + H G
Sbjct: 408 NGSYDEALKLFCNMRV-----GGITPDKIVTASVLSASAELTLLEFGQQV-HGNYIKSGF 461
Query: 628 EPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLL 671
S LV + + G +E+A + +M ++ + W+ L+
Sbjct: 462 PSSLSVNNSLVTMYTKCGSLEDANVIFNSM--EIRDLITWTCLI 503
Score = 186 bits (473), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 155/589 (26%), Positives = 255/589 (43%), Gaps = 64/589 (10%)
Query: 48 QSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSV 107
+S S ++A + + M + G+ P+ + +VL+ + L G+QIHGH K G+ V
Sbjct: 102 KSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGF-DLDV 160
Query: 108 AVANSLVNMYGKCGDLAGAHHVFDRIS-DRDHVSWNSMIAAACRFXXXXXXXXXXXXXXX 166
V N L+ MY +C ++ A ++F+ + ++++V+W SM+ +
Sbjct: 161 NVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRR 220
Query: 167 XNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRID 225
+T S+ AC+++ +G QVH ++G + +AL+ MYAK ++
Sbjct: 221 EGNQSNQYTFPSVLTACASV-SACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREME 279
Query: 226 EAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALP--A 283
A+AL + D+VSWN++I + EAL M + ++ D T+ S L A
Sbjct: 280 SARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFA 339
Query: 284 CSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAV 343
S EM + H ++ T V +ALVDMY D VF+G++ + V
Sbjct: 340 LSRTEM-KIASSAHCLIVK-TGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVIS 397
Query: 344 WNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYV 403
W A++ G N DEA+KLF M TP+ +S+L A + +HG
Sbjct: 398 WTALVTGNTHNGSYDEALKLFCNMRV-GGITPDKIVTASVLSASAELTLLEFGQQVHGNY 456
Query: 404 VKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDAL 463
+K GF V N+L+ MY++ G +E + IF SM+ RD+++W +I GY G
Sbjct: 457 IKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG------ 510
Query: 464 NLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATD 523
LL D QR D + T+ + PG YA
Sbjct: 511 -LLEDAQRYFD-------------SMRTVYGITPG------------PEHYA-------- 536
Query: 524 IAVGSALIDMYAKCGCLNLSRIVFDQMPTR-NVITWNVLIMAYGMHGKGEEALELFRRMV 582
+ID++ + G + QM + W ++ A HG E + ++
Sbjct: 537 -----CMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLM 591
Query: 583 AEKDSNKEIRPNE-VTYIAIFAACSHSGMVDEGLNLFHTMKA-NHGIEP 629
E+ PN V Y+ + S +G DE N+ MK+ N EP
Sbjct: 592 -------ELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEP 633
Score = 169 bits (428), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 206/439 (46%), Gaps = 13/439 (2%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
W L +Q+ +AI + ++ G + + FP+VL A A V+ +G Q+H +
Sbjct: 194 TWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCI 253
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
K G+ T++ V ++L++MY KC ++ A + + + D VSWNSMI R
Sbjct: 254 VKSGF-KTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEA 312
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTF--TNNALV 215
++ FT+ SI + + R + + H + G + T+ NNALV
Sbjct: 313 LSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTG-YATYKLVNNALV 371
Query: 216 TMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGV 275
MYAK G +D A +F +KD++SW +++ + N ++EAL +M G+ PD +
Sbjct: 372 DMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKI 431
Query: 276 TLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDG 335
AS L A + L +L G+++HG ++ + + V ++LV MY C + +F+
Sbjct: 432 VTASVLSASAELTLLEFGQQVHGNYIK-SGFPSSLSVNNSLVTMYTKCGSLEDANVIFNS 490
Query: 336 ILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLD 395
+ R + W +I GYA+N ++A + F M TP + ++ R F+
Sbjct: 491 MEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVK 550
Query: 396 KEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIE----ISKSIFGSMDRRDIVSWNTMIT 451
E + + + E D V A++ + G IE +K++ ++ + V + +
Sbjct: 551 VEQL---LHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLM-ELEPNNAVPYVQLSN 606
Query: 452 GYVVCGRHDDALNLLHDMQ 470
Y GR D+A N+ M+
Sbjct: 607 MYSAAGRQDEAANVRRLMK 625
Score = 146 bits (369), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 186/395 (47%), Gaps = 32/395 (8%)
Query: 309 NSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMV 368
+ F + ++ Y N ++ +F + WNA+I+GY ++ EA LF EM
Sbjct: 58 DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEM- 116
Query: 369 YESD-FTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGR 427
+SD PN TL S+L C L E IHG+ +K GF+ D V N L+ MY++ R
Sbjct: 117 -QSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKR 175
Query: 428 IEISKSIFGSMD-RRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLK 486
I ++ +F +M+ ++ V+W +M+TGY G A+ D++R E ++S
Sbjct: 176 ISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRR------EGNQS---- 225
Query: 487 PNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIV 546
N T +VL C ++H +K T+I V SALIDMYAKC + +R +
Sbjct: 226 -NQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARAL 284
Query: 547 FDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACS 606
+ M +V++WN +I+ G EAL +F RM ++++ ++ T +I +
Sbjct: 285 LEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRM-----HERDMKIDDFTIPSILNCFA 339
Query: 607 HSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDA 666
S + + H + G LVD+ + G ++ A K+ + M K V +
Sbjct: 340 LSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIE--KDVIS 397
Query: 667 WSSLLG----------ACKIHQNLEVGEIAAKQLL 691
W++L+ A K+ N+ VG I +++
Sbjct: 398 WTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIV 432
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 135/277 (48%), Gaps = 22/277 (7%)
Query: 409 EKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHD 468
E+D++ N ++ YS R+ ++ +F S ++ +SWN +I+GY G +A NL +
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWE 115
Query: 469 MQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGS 528
MQ S +KPN TL +VL C +IH + +K D+ V +
Sbjct: 116 MQ-----------SDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVN 164
Query: 529 ALIDMYAKCGCLNLSRIVFDQMP-TRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDS 587
L+ MYA+C ++ + +F+ M +N +TW ++ Y +G +A+E FR + E +
Sbjct: 165 GLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGN- 223
Query: 588 NKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRV 647
+ N+ T+ ++ AC+ G+ + H G + + + L+D+ + +
Sbjct: 224 ----QSNQYTFPSVLTACASVSACRVGVQV-HCCIVKSGFKTNIYVQSALIDMYAKCREM 278
Query: 648 EEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGE 684
E A L++ M + V +W+S++ C + Q L +GE
Sbjct: 279 ESARALLEGM--EVDDVVSWNSMIVGC-VRQGL-IGE 311
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 66/120 (55%), Gaps = 15/120 (12%)
Query: 511 IHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGK 570
IH+YA + KL +++ +G +K G ++ +R +FD+MP R+ TWN +I+AY +
Sbjct: 20 IHSYADRTKLHSNLLLGD-----LSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRR 74
Query: 571 GEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPS 630
+A +LFR + N +++ A+ + SG E NLF M+++ GI+P+
Sbjct: 75 LSDAEKLFRSNPVK---------NTISWNALISGYCKSGSKVEAFNLFWEMQSD-GIKPN 124
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/697 (33%), Positives = 374/697 (53%), Gaps = 33/697 (4%)
Query: 175 TLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGL 233
TL+S+A ++L KQ+H + TF N L+ + + LF
Sbjct: 18 TLISVACTVNHL-------KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSH 70
Query: 234 FDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTG 293
++ +N++I+ N F E L + + G+ G T L AC+ + G
Sbjct: 71 TQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLG 130
Query: 294 KEIHGYALR---NTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAG 350
++H ++ N D+ ++L+ +Y + + +FD I R+V W A+ +G
Sbjct: 131 IDLHSLVVKCGFNHDVA----AMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 351 YARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEK 410
Y + EAI LF +MV E P+S + +L ACV E I Y+ + +K
Sbjct: 187 YTTSGRHREAIDLFKKMV-EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQK 245
Query: 411 DKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQ 470
+ +V+ L+++Y++ G++E ++S+F SM +DIV+W+TMI GY + + L +Q
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELF--LQ 303
Query: 471 RGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSAL 530
Q++ LKP+ +++ L C + + + T++ + +AL
Sbjct: 304 MLQEN---------LKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANAL 354
Query: 531 IDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKE 590
IDMYAKCG + VF +M ++++ N I +G + + +F + EK
Sbjct: 355 IDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQ--TEKLG--- 409
Query: 591 IRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEA 650
I P+ T++ + C H+G++ +GL F+ + + ++ + +HY C+VDL GR+G +++A
Sbjct: 410 ISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDA 469
Query: 651 YKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSS 710
Y+LI MP + W +LL C++ ++ ++ E K+L+ LEP A +YV LSNIYS
Sbjct: 470 YRLICDMPMRPNAI-VWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSV 528
Query: 711 AGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQR 770
G WD+A ++R M + G++K PG SWIE +VH+FLA D SHP S +++ LE+L
Sbjct: 529 GGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNE 588
Query: 771 MRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDC 830
MR G+VP T V DV++EEKE +L HSE+LA+A GL++T G IRV KNLRVC DC
Sbjct: 589 MRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDC 648
Query: 831 HVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
H K ISKI REI++RD RFH F NG+CSC DYW
Sbjct: 649 HEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 203/450 (45%), Gaps = 51/450 (11%)
Query: 52 FLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVAN 111
F + + + ++ G+ F FP VLKA + LG +H V K G+ + VA
Sbjct: 92 FHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGF-NHDVAAMT 150
Query: 112 SLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDP 171
SL+++Y G L AH +FD I DR V+W ++ + V P
Sbjct: 151 SLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKP 210
Query: 172 TSFTLVSIAHACSNLRDGLSLGKQVHAYTFR-NGDWRTFTNNALVTMYAKLGRIDEAKAL 230
S+ +V + AC ++ D L G+ + Y +F LV +YAK G++++A+++
Sbjct: 211 DSYFIVQVLSACVHVGD-LDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Query: 231 FGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEML 290
F +KD+V+W+T+I + N +E + MLQ ++PD ++ L +C+ L L
Sbjct: 270 FDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGAL 329
Query: 291 RTGKEIHGYALRNT-DLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIA 349
G+ G +L + + + N F+ +AL+DMY C +G VF + + + + NA I+
Sbjct: 330 DLGE--WGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAIS 387
Query: 350 GYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFE 409
G A+N + +F + + +P+ +T LL CV A L ++G+ +
Sbjct: 388 GLAKNGHVKLSFAVFGQ-TEKLGISPDGSTFLGLLCGCVH--AGLIQDGLRFF------- 437
Query: 410 KDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDM 469
NA+ +Y+ +R + + M+ + G DDA L+ DM
Sbjct: 438 ------NAISCVYAL---------------KRTVEHYGCMVDLWGRAGMLDDAYRLICDM 476
Query: 470 QRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
P++PN++ +L GC
Sbjct: 477 --------------PMRPNAIVWGALLSGC 492
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 145/325 (44%), Gaps = 16/325 (4%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
RS W S +AI + MV GV PD++ VL A V DL+ G+ I
Sbjct: 175 RSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWI 234
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
++ + S V +LVN+Y KCG + A VFD + ++D V+W++MI
Sbjct: 235 VKYMEEMEMQKNSF-VRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSF 293
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRT--FTN 211
N+ P F++V +C++L L LG+ + R+ ++ T F
Sbjct: 294 PKEGIELFLQMLQENLKPDQFSIVGFLSSCASL-GALDLGEWGISLIDRH-EFLTNLFMA 351
Query: 212 NALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVR 271
NAL+ MYAK G + +F +KD+V N IS L++N + + + G+
Sbjct: 352 NALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGIS 411
Query: 272 PDGVTLASALPACSHLEMLRTGKEIHG-----YALRNTDLIDNSFVGSALVDMYCNCKKA 326
PDG T L C H +++ G YAL+ T +++ +VD++
Sbjct: 412 PDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRT--VEHY---GCMVDLWGRAGML 466
Query: 327 DKG-RWVFDGILRRTVAVWNAMIAG 350
D R + D +R VW A+++G
Sbjct: 467 DDAYRLICDMPMRPNAIVWGALLSG 491
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 239/728 (32%), Positives = 396/728 (54%), Gaps = 26/728 (3%)
Query: 55 AISTYANMVAAGVPPDNFAFPAVLKAAAGVND-LNLGKQIHGHVFKFGYASTSVAVANSL 113
AI Y +V+ F FP+VL+A AG + L++G ++HG + K G +V + SL
Sbjct: 84 AIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAV-IETSL 142
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
+ MYG+ G+L+ A VFD + RD V+W++++++ V+P +
Sbjct: 143 LCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDA 202
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFG 232
T++S+ C+ L L + + VH R D N+L+TMY+K G + ++ +F
Sbjct: 203 VTMISVVEGCAEL-GCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFE 261
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRT 292
K+ VSW +ISS ++ + E+AL M++SG+ P+ VTL S L +C + ++R
Sbjct: 262 KIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIRE 321
Query: 293 GKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYA 352
GK +HG+A+R + + ALV++Y C K V + R + WN++I+ YA
Sbjct: 322 GKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYA 381
Query: 353 RNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDK 412
+A+ LF +MV + P++ TL+S + AC + IHG+V++ D+
Sbjct: 382 HRGMVIQALGLFRQMVTQR-IKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDE 439
Query: 413 YVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRG 472
+VQN+L+DMYS+ G ++ + ++F + R +V+WN+M+ G+ G +A++L M
Sbjct: 440 FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHS 499
Query: 473 QDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALID 532
L+ N VT + V+ C +H + L D+ +ALID
Sbjct: 500 Y-----------LEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALID 547
Query: 533 MYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIR 592
MYAKCG LN + VF M +R++++W+ +I AYGMHG+ A+ F +MV +
Sbjct: 548 MYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMV-----ESGTK 602
Query: 593 PNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYK 652
PNEV ++ + +AC HSG V+EG F+ MK+ G+ P+S+H+AC +DLL RSG ++EAY+
Sbjct: 603 PNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYR 661
Query: 653 LIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAG 712
IK MP + W SL+ C+IHQ +++ + L + + +Y LLSNIY+ G
Sbjct: 662 TIKEMPF-LADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEG 720
Query: 713 LWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMR 772
W++ +R MK ++K PG S IE +V +F AG+ + Q+ E++ +L N LQ +
Sbjct: 721 EWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGN-LQNLT 779
Query: 773 KEGYVPDT 780
E +V D+
Sbjct: 780 NEEHVVDS 787
Score = 235 bits (599), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 153/577 (26%), Positives = 273/577 (47%), Gaps = 27/577 (4%)
Query: 85 NDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSM 144
+ L L Q+H H+ G L+ Y G + VF+ D + +
Sbjct: 12 SSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVL 71
Query: 145 IAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG 204
I + F S+ AC+ R+ LS+G +VH + G
Sbjct: 72 IKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGG 131
Query: 205 -DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLY 263
D +L+ MY + G + +A+ +F +DLV+W+T++SS +N +AL
Sbjct: 132 VDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFK 191
Query: 264 HMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNC 323
M+ GV PD VT+ S + C+ L LR + +HG R +D + S L+ MY C
Sbjct: 192 CMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNS-LLTMYSKC 250
Query: 324 KKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSL 383
+F+ I ++ W AMI+ Y R EF ++A++ F EM+ +S PN TL S+
Sbjct: 251 GDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMI-KSGIEPNLVTLYSV 309
Query: 384 LPACVRCKAFLDKEGIHGYVVKRGFEKD-KYVQNALMDMYSRMGRIEISKSIFGSMDRRD 442
L +C + + +HG+ V+R + + + + AL+++Y+ G++ +++ + R+
Sbjct: 310 LSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRN 369
Query: 443 IVSWNTMITGYVVCGRHDDALNLLHDM--QRGQDDEYEDDESIPLKPNSVTLMTVLPGCX 500
IV+WN++I+ Y G AL L M QR +KP++ TL + + C
Sbjct: 370 IVAWNSLISLYAHRGMVIQALGLFRQMVTQR-------------IKPDAFTLASSISACE 416
Query: 501 XXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNV 560
+IH + ++ + +D V ++LIDMY+K G ++ + VF+Q+ R+V+TWN
Sbjct: 417 NAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNS 475
Query: 561 LIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHT 620
++ + +G EA+ LF M + + NEVT++A+ ACS G +++G + H
Sbjct: 476 MLCGFSQNGNSVEAISLFDYMY-----HSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHK 530
Query: 621 MKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTM 657
+ + + +D L+D+ + G + A + + M
Sbjct: 531 LIISGLKDLFTD--TALIDMYAKCGDLNAAETVFRAM 565
Score = 214 bits (546), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 240/469 (51%), Gaps = 21/469 (4%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R AW + ++ ++A+ + MV GV PD +V++ A + L + + +
Sbjct: 165 RDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSV 224
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
HG + + + + NSL+ MY KCGDL + +F++I+ ++ VSW +MI++ R
Sbjct: 225 HGQITRKMF-DLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEF 283
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFR---NGDWRTFT 210
++P TL S+ +C L + GK VH + R + ++ + +
Sbjct: 284 SEKALRSFSEMIKSGIEPNLVTLYSVLSSC-GLIGLIREGKSVHGFAVRRELDPNYESLS 342
Query: 211 NNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGV 270
ALV +YA+ G++ + + + + D+++V+WN++IS + +AL M+ +
Sbjct: 343 -LALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRI 401
Query: 271 RPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGR 330
+PD TLAS++ AC + ++ GK+IHG+ +R TD+ D FV ++L+DMY D
Sbjct: 402 KPDAFTLASSISACENAGLVPLGKQIHGHVIR-TDVSDE-FVQNSLIDMYSKSGSVDSAS 459
Query: 331 WVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRC 390
VF+ I R+V WN+M+ G+++N EAI LF + +Y S N T +++ AC
Sbjct: 460 TVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLF-DYMYHSYLEMNEVTFLAVIQACSSI 518
Query: 391 KAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMI 450
+ + +H ++ G KD + AL+DMY++ G + ++++F +M R IVSW++MI
Sbjct: 519 GSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMI 577
Query: 451 TGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
Y + GR A++ + M KPN V M VL C
Sbjct: 578 NAYGMHGRIGSAISTFNQMVESGT-----------KPNEVVFMNVLSAC 615
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 190/403 (47%), Gaps = 11/403 (2%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+A+ +++ M+ +G+ P+ +VL + + + GK +HG + +++ +L
Sbjct: 286 KALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLAL 345
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
V +Y +CG L+ V +SDR+ V+WNS+I+ + P +
Sbjct: 346 VELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDA 405
Query: 174 FTLVSIAHACSNLRDGL-SLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFG 232
FTL S AC N GL LGKQ+H + R F N+L+ MY+K G +D A +F
Sbjct: 406 FTLASSISACENA--GLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFN 463
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRT 292
+ +V+WN+++ SQN EA+ +M S + + VT + + ACS + L
Sbjct: 464 QIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEK 523
Query: 293 GKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYA 352
GK +H + L + L D F +AL+DMY C + VF + R++ W++MI Y
Sbjct: 524 GKWVH-HKLIISGLKD-LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYG 581
Query: 353 RNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDK 412
+ AI F +MV ES PN ++L AC + +EG + + + + F
Sbjct: 582 MHGRIGSAISTFNQMV-ESGTKPNEVVFMNVLSACGHSGSV--EEGKYYFNLMKSFGVSP 638
Query: 413 YVQN--ALMDMYSRMGRIEISKSIFGSMD-RRDIVSWNTMITG 452
++ +D+ SR G ++ + M D W +++ G
Sbjct: 639 NSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 681
Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 126/261 (48%), Gaps = 3/261 (1%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+ AW + L A +QA+ + MV + PD F + + A + LGKQI
Sbjct: 368 RNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQI 427
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
HGHV + + V NSL++MY K G + A VF++I R V+WNSM+ +
Sbjct: 428 HGHVIRTDVSDE--FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGN 485
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNA 213
++ T +++ ACS++ L GK VH +G FT+ A
Sbjct: 486 SVEAISLFDYMYHSYLEMNEVTFLAVIQACSSI-GSLEKGKWVHHKLIISGLKDLFTDTA 544
Query: 214 LVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPD 273
L+ MYAK G ++ A+ +F + +VSW+++I++ + R A+ M++SG +P+
Sbjct: 545 LIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPN 604
Query: 274 GVTLASALPACSHLEMLRTGK 294
V + L AC H + GK
Sbjct: 605 EVVFMNVLSACGHSGSVEEGK 625
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 510 EIHAYAL-KQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMH 568
++HA+ L +L D + LI+ YA G + SR+VF+ P + + VLI
Sbjct: 19 QLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWC 78
Query: 569 GKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNL---FHTMKANH 625
+ A++L+ R+V+E + ++ + ++ AC+ S E L++ H
Sbjct: 79 HLLDAAIDLYHRLVSET-----TQISKFVFPSVLRACAGS---REHLSVGGKVHGRIIKG 130
Query: 626 GIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEI 685
G++ + L+ + G++G + +A K+ MP ++ + AWS+L+ +C LE GE+
Sbjct: 131 GVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMP--VRDLVAWSTLVSSC-----LENGEV 183
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/594 (36%), Positives = 340/594 (57%), Gaps = 23/594 (3%)
Query: 276 TLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDG 335
+L +A+ +C +E+ R +H +++ + F+G LV Y +FD
Sbjct: 36 SLIAAVKSCVSIELCRL---LHCKVVKSVSY-RHGFIGDQLVGCYLRLGHDVCAEKLFDE 91
Query: 336 ILRRTVAVWNAMIAGYARNEFDDEAIKLFIEM-VYESDFTPNSTTLSSLLPACVRCKAFL 394
+ R + WN++I+GY+ + + ++ M + E F PN T S++ ACV +
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 395 DKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYV 454
+ IHG V+K G ++ V NA ++ Y + G + S +F + +++VSWNTMI ++
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211
Query: 455 VCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAY 514
G + L + +R + +P+ T + VL C IH
Sbjct: 212 QNGLAEKGLAYFNMSRR-----------VGHEPDQATFLAVLRSCEDMGVVRLAQGIHGL 260
Query: 515 ALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEA 574
+ + + + +AL+D+Y+K G L S VF ++ + + + W ++ AY HG G +A
Sbjct: 261 IMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDA 320
Query: 575 LELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHY 634
++ F MV + I P+ VT+ + ACSHSG+V+EG + F TM + I+P DHY
Sbjct: 321 IKHFELMV-----HYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHY 375
Query: 635 ACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLE 694
+C+VDLLGRSG +++AY LIK MP W +LLGAC+++++ ++G AA++L LE
Sbjct: 376 SCMVDLLGRSGLLQDAYGLIKEMPME-PSSGVWGALLGACRVYKDTQLGTKAAERLFELE 434
Query: 695 PNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASH 754
P +YV+LSNIYS++GLW A IR MK+ G+ + GCS+IEH +++HKF+ GD SH
Sbjct: 435 PRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSH 494
Query: 755 PQSKELHEYLENLLQRMRKE-GYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTP 813
P+S+++ + L+ + ++M+ E GY T VLHDV ++ KE M+ HSE++A+AFGLL
Sbjct: 495 PESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVS 554
Query: 814 PGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
P I + KNLR+C DCH K IS I R II+RD +RFHHF +G+CSC DYW
Sbjct: 555 PMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 165/375 (44%), Gaps = 21/375 (5%)
Query: 194 KQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQND 253
K V + ++R+G F + LV Y +LG A+ LF ++DLVSWN++IS S
Sbjct: 56 KVVKSVSYRHG----FIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRG 111
Query: 254 RFEEALLFLYHMLQS--GVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSF 311
+ L M+ S G RP+ VT S + AC + G+ IHG ++ +++
Sbjct: 112 YLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMK-FGVLEEVK 170
Query: 312 VGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYES 371
V +A ++ Y +F+ + + + WN MI + +N ++ + F M
Sbjct: 171 VVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYF-NMSRRV 229
Query: 372 DFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEIS 431
P+ T ++L +C +GIHG ++ GF +K + AL+D+YS++GR+E S
Sbjct: 230 GHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDS 289
Query: 432 KSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVT 491
++F + D ++W M+ Y G DA+ +E + P+ VT
Sbjct: 290 STVFHEITSPDSMAWTAMLAAYATHGFGRDAIK-----------HFELMVHYGISPDHVT 338
Query: 492 LMTVLPGCXXXXXXXXXXE-IHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQM 550
+L C + + ++ + S ++D+ + G L + + +M
Sbjct: 339 FTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEM 398
Query: 551 PTR-NVITWNVLIMA 564
P + W L+ A
Sbjct: 399 PMEPSSGVWGALLGA 413
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 143/308 (46%), Gaps = 37/308 (12%)
Query: 380 LSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD 439
+SSL+ A C + +H VVK + ++ + L+ Y R+G ++ +F M
Sbjct: 34 VSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMP 93
Query: 440 RRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
RD+VSWN++I+GY G +L M + + +PN VT ++++ C
Sbjct: 94 ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISE---------VGFRPNEVTFLSMISAC 144
Query: 500 XXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWN 559
IH +K + ++ V +A I+ Y K G L S +F+ + +N+++WN
Sbjct: 145 VYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWN 204
Query: 560 VLIMAYGMHGKGEEALELF---RRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVD---- 612
+I+ + +G E+ L F RR+ E P++ T++A+ +C G+V
Sbjct: 205 TMIVIHLQNGLAEKGLAYFNMSRRVGHE--------PDQATFLAVLRSCEDMGVVRLAQG 256
Query: 613 -EGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIK--TMPSNMKKVDAWSS 669
GL +F N I + L+DL + GR+E++ + T P +M AW++
Sbjct: 257 IHGLIMFGGFSGNKCITTA------LLDLYSKLGRLEDSSTVFHEITSPDSM----AWTA 306
Query: 670 LLGACKIH 677
+L A H
Sbjct: 307 MLAAYATH 314
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 137/320 (42%), Gaps = 12/320 (3%)
Query: 109 VANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIA--AACRFXXXXXXXXXXXXXXX 166
+ + LV Y + G A +FD + +RD VSWNS+I+ + +
Sbjct: 68 IGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISE 127
Query: 167 XNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTF-TNNALVTMYAKLGRID 225
P T +S+ AC G+ +H + G NA + Y K G +
Sbjct: 128 VGFRPNEVTFLSMISACV-YGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLT 186
Query: 226 EAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACS 285
+ LF K+LVSWNT+I QN E+ L + + G PD T + L +C
Sbjct: 187 SSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCE 246
Query: 286 HLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWN 345
+ ++R + IHG + N + +AL+D+Y + + VF I W
Sbjct: 247 DMGVVRLAQGIHGLIMFG-GFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWT 305
Query: 346 AMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVK 405
AM+A YA + F +AIK F E++ +P+ T + LL AC + L +EG H +
Sbjct: 306 AMLAAYATHGFGRDAIKHF-ELMVHYGISPDHVTFTHLLNACSH--SGLVEEGKHYFETM 362
Query: 406 RGFEKDKYVQNALMDMYSRM 425
+Y + +D YS M
Sbjct: 363 ----SKRYRIDPRLDHYSCM 378
Score = 99.8 bits (247), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 11/235 (4%)
Query: 65 AGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLA 124
G P+ F +++ A G+ IHG V KFG V V N+ +N YGK GDL
Sbjct: 128 VGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLE-EVKVVNAFINWYGKTGDLT 186
Query: 125 GAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACS 184
+ +F+ +S ++ VSWN+MI + +P T +++ +C
Sbjct: 187 SSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCE 246
Query: 185 NLRDGLSLGKQVHAYTFRNGDWRTFTNN-----ALVTMYAKLGRIDEAKALFGLFDDKDL 239
++ + L + +H G F+ N AL+ +Y+KLGR++++ +F D
Sbjct: 247 DM-GVVRLAQGIHGLIMFGG----FSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDS 301
Query: 240 VSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGK 294
++W ++++ + + +A+ M+ G+ PD VT L ACSH ++ GK
Sbjct: 302 MAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGK 356
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 2/129 (1%)
Query: 58 TYANMVA-AGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNM 116
Y NM G PD F AVL++ + + L + IHG + FG S + + +L+++
Sbjct: 221 AYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIM-FGGFSGNKCITTALLDL 279
Query: 117 YGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTL 176
Y K G L + VF I+ D ++W +M+AA + P T
Sbjct: 280 YSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTF 339
Query: 177 VSIAHACSN 185
+ +ACS+
Sbjct: 340 THLLNACSH 348
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/593 (34%), Positives = 347/593 (58%), Gaps = 26/593 (4%)
Query: 277 LASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI 336
+ A P L+ + + GY R+ L+ + L+ + C+ + +F +
Sbjct: 15 IVRAGPRVKQLQQVHAHLIVTGYG-RSRSLL------TKLITLACSARAIAYTHLLFLSV 67
Query: 337 LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDK 396
++N++I ++ + + M+ S+ +P++ T +S++ +C A
Sbjct: 68 PLPDDFLFNSVIKSTSKLRLPLHCVAYYRRML-SSNVSPSNYTFTSVIKSCADLSALRIG 126
Query: 397 EGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVC 456
+G+H + V GF D YVQ AL+ YS+ G +E ++ +F M + IV+WN++++G+
Sbjct: 127 KGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQN 186
Query: 457 GRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYAL 516
G D+A+ + + M+ +P+S T +++L C +H Y +
Sbjct: 187 GLADEAIQVFYQMRES-----------GFEPDSATFVSLLSACAQTGAVSLGSWVHQYII 235
Query: 517 KQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALE 576
+ L ++ +G+ALI++Y++CG + +R VFD+M NV W +I AYG HG G++A+E
Sbjct: 236 SEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVE 295
Query: 577 LFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYAC 636
LF +M +D I PN VT++A+ +AC+H+G+V+EG +++ M ++ + P +H+ C
Sbjct: 296 LFNKM---EDDCGPI-PNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVC 351
Query: 637 LVDLLGRSGRVEEAYKLIKTMPSNMKKVDA--WSSLLGACKIHQNLEVGEIAAKQLLVLE 694
+VD+LGR+G ++EAYK I + + K W+++LGACK+H+N ++G AK+L+ LE
Sbjct: 352 MVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALE 411
Query: 695 PNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASH 754
P+ H+V+LSNIY+ +G D+ IR M +RK+ G S IE ++ + F GD SH
Sbjct: 412 PDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESH 471
Query: 755 PQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPP 814
++ E++ YLE L+ R ++ GY P + V+H V++EEKE L HSE+LA+AFGLL T
Sbjct: 472 QETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD 531
Query: 815 GTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
I + KNLR+C DCH A K+IS + +R+I +RD RFHHF+NG+CSC DYW
Sbjct: 532 -VAITIVKNLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 184/379 (48%), Gaps = 16/379 (4%)
Query: 67 VPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGA 126
V ++ A+ A+++A V L +Q+H H+ GY S ++ L+ + +A
Sbjct: 5 VAANSAAYEAIVRAGPRVKQL---QQVHAHLIVTGYGR-SRSLLTKLITLACSARAIAYT 60
Query: 127 HHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNL 186
H +F + D +NS+I + + NV P+++T S+ +C++L
Sbjct: 61 HLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADL 120
Query: 187 RDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTV 245
L +GK VH + +G T+ ALVT Y+K G ++ A+ +F +K +V+WN++
Sbjct: 121 -SALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSL 179
Query: 246 ISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTD 305
+S QN +EA+ Y M +SG PD T S L AC+ + G +H Y + +
Sbjct: 180 VSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYII-SEG 238
Query: 306 LIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFI 365
L N +G+AL+++Y C K R VFD + VA W AMI+ Y + + +A++LF
Sbjct: 239 LDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFN 298
Query: 366 EMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNA-----LMD 420
+M + PN+ T ++L AC A L +EG Y KR + + + ++D
Sbjct: 299 KMEDDCGPIPNNVTFVAVLSACAH--AGLVEEGRSVY--KRMTKSYRLIPGVEHHVCMVD 354
Query: 421 MYSRMGRIEISKSIFGSMD 439
M R G ++ + +D
Sbjct: 355 MLGRAGFLDEAYKFIHQLD 373
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 145/304 (47%), Gaps = 8/304 (2%)
Query: 53 LQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANS 112
L ++ Y M+++ V P N+ F +V+K+ A ++ L +GK +H H G+ V +
Sbjct: 89 LHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFG-LDTYVQAA 147
Query: 113 LVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPT 172
LV Y KCGD+ GA VFDR+ ++ V+WNS+++ + +P
Sbjct: 148 LVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPD 207
Query: 173 SFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALF 231
S T VS+ AC+ +SLG VH Y G D AL+ +Y++ G + +A+ +F
Sbjct: 208 SATFVSLLSACAQ-TGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVF 266
Query: 232 GLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQS-GVRPDGVTLASALPACSHLEML 290
+ ++ +W +IS+ + ++A+ M G P+ VT + L AC+H ++
Sbjct: 267 DKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLV 326
Query: 291 RTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKG-RWV--FDGILRRTV-AVWNA 346
G+ ++ ++ LI +VDM D+ +++ D + T A+W A
Sbjct: 327 EEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTA 386
Query: 347 MIAG 350
M+
Sbjct: 387 MLGA 390
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/615 (35%), Positives = 338/615 (54%), Gaps = 39/615 (6%)
Query: 281 LPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADK-------GRWVF 333
L +CS L+ IHG+ LR T LI + FV S L+ + + +K +F
Sbjct: 19 LQSCSSFSDLKI---IHGFLLR-THLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIF 74
Query: 334 DGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAF 393
I + V+N +I ++ +A + +M+ +S P++ T L+ A +
Sbjct: 75 SQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQML-KSRIWPDNITFPFLIKASSEMECV 133
Query: 394 LDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGY 453
L E H +V+ GF+ D YV+N+L+ MY+ G I + IFG M RD+VSW +M+ GY
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGY 193
Query: 454 VVCGRHDDALNLLHDMQ--------------------RGQDDEYEDDESIPLKPNSVTLM 493
CG ++A + +M D +E + + N ++
Sbjct: 194 CKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMV 253
Query: 494 TVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR 553
+V+ C + Y +K + ++ +G+AL+DM+ +CG + + VF+ +P
Sbjct: 254 SVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPET 313
Query: 554 NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDE 613
+ ++W+ +I +HG +A+ F +M++ P +VT+ A+ +ACSH G+V++
Sbjct: 314 DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLG-----FIPRDVTFTAVLSACSHGGLVEK 368
Query: 614 GLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGA 673
GL ++ MK +HGIEP +HY C+VD+LGR+G++ EA I M +LLGA
Sbjct: 369 GLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVK-PNAPILGALLGA 427
Query: 674 CKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEP 733
CKI++N EV E L+ ++P + +YVLLSNIY+ AG WD+ +R MKE V+K P
Sbjct: 428 CKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPP 487
Query: 734 GCSWIEHRDEVHKFLAGD-ASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEK 792
G S IE +++KF GD HP+ ++ E +L ++R GY +T DVD+EEK
Sbjct: 488 GWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEK 547
Query: 793 ETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRR 852
E+ + HSE+LAIA+G++ T PGTTIR+ KNLRVC DCH TK IS++ RE+I+RD R
Sbjct: 548 ESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNR 607
Query: 853 FHHFRNGTCSCGDYW 867
FHHFRNG CSC DYW
Sbjct: 608 FHHFRNGVCSCRDYW 622
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 127/276 (46%), Gaps = 34/276 (12%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+A Y M+ + + PDN FP ++KA++ + + +G+Q H + +FG+ V V NSL
Sbjct: 100 KAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGF-QNDVYVENSL 158
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXN----- 168
V+MY CG +A A +F ++ RD VSW SM+A C+ N
Sbjct: 159 VHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWS 218
Query: 169 ---------------VDPTSF-----------TLVSIAHACSNLRDGLSLGKQVHAYTFR 202
+D F +VS+ +C++L L G++ + Y +
Sbjct: 219 IMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHL-GALEFGERAYEYVVK 277
Query: 203 NG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLF 261
+ ALV M+ + G I++A +F + D +SW+++I L+ + +A+ +
Sbjct: 278 SHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHY 337
Query: 262 LYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIH 297
M+ G P VT + L ACSH ++ G EI+
Sbjct: 338 FSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIY 373
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 179/404 (44%), Gaps = 69/404 (17%)
Query: 76 AVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNM------YGKCGDLAG-AHH 128
A+L++ + +DL K IHG + + + + V VA+ L+ + + K +L G A+
Sbjct: 17 ALLQSCSSFSDL---KIIHGFLLR-THLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72
Query: 129 VFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRD 188
+F +I + + +N +I + P + T + A S + +
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEM-E 131
Query: 189 GLSLGKQVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDEAKALFG--------------- 232
+ +G+Q H+ R G + N+LV MYA G I A +FG
Sbjct: 132 CVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVA 191
Query: 233 -------------LFDD---KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVT 276
+FD+ ++L +W+ +I+ ++N+ FE+A+ M + GV +
Sbjct: 192 GYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETV 251
Query: 277 LASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI 336
+ S + +C+HL L G+ + Y ++ + + N +G+ALVDM+ C +K VF+G+
Sbjct: 252 MVSVISSCAHLGALEFGERAYEYVVK-SHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL 310
Query: 337 LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDK 396
W+++I G A + +A+ F +M+ F P T +++L AC
Sbjct: 311 PETDSLSWSSIIKGLAVHGHAHKAMHYFSQMI-SLGFIPRDVTFTAVLSACS-------- 361
Query: 397 EGIHGYVVKRGFE------KDKYVQ------NALMDMYSRMGRI 428
HG +V++G E KD ++ ++DM R G++
Sbjct: 362 ---HGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKL 402
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+ W + A+++ F +AI + M GV + +V+ + A + L G++
Sbjct: 212 RNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERA 271
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
+ +V K + + ++ + +LV+M+ +CGD+ A HVF+ + + D +SW+S+I
Sbjct: 272 YEYVVK-SHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGH 330
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDW----RTF 209
P T ++ ACS+ G + K + Y D R
Sbjct: 331 AHKAMHYFSQMISLGFIPRDVTFTAVLSACSH---GGLVEKGLEIYENMKKDHGIEPRLE 387
Query: 210 TNNALVTMYAKLGRIDEAK 228
+V M + G++ EA+
Sbjct: 388 HYGCIVDMLGRAGKLAEAE 406
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/637 (34%), Positives = 347/637 (54%), Gaps = 64/637 (10%)
Query: 176 LVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFD 235
L+ C +L DG + ++ RN +T N++VT KLG +DEA +LF
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQ---RN----IYTWNSVVTGLTKLGFLDEADSLFRSMP 113
Query: 236 DKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKE 295
++D +WN+++S +Q+DR EEAL + M + G + + AS L ACS L + G +
Sbjct: 114 ERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQ 173
Query: 296 IHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNE 355
+H + + + + ++GSALVDMY C + + VFD + R V WN++I + +N
Sbjct: 174 VHSL-IAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG 232
Query: 356 FDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKR-GFEKDKYV 414
EA+ +F +M+ ES P+ TL+S++ AC A + +HG VVK D +
Sbjct: 233 PAVEALDVF-QMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIIL 291
Query: 415 QNALMDMYSRMGRIEISKSIFGSMD-------------------------------RRDI 443
NA +DMY++ RI+ ++ IF SM R++
Sbjct: 292 SNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNV 351
Query: 444 VSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXX 503
VSWN +I GY G +++AL+L ++R ES+ P + +L C
Sbjct: 352 VSWNALIAGYTQNGENEEALSLFCLLKR---------ESVC--PTHYSFANILKACADLA 400
Query: 504 XXXXXXEIHAYALKQKLA------TDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVIT 557
+ H + LK DI VG++LIDMY KCGC+ +VF +M R+ ++
Sbjct: 401 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 460
Query: 558 WNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNL 617
WN +I+ + +G G EALELFR M+ + +P+ +T I + +AC H+G V+EG +
Sbjct: 461 WNAMIIGFAQNGYGNEALELFREMLESGE-----KPDHITMIGVLSACGHAGFVEEGRHY 515
Query: 618 FHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIH 677
F +M + G+ P DHY C+VDLLGR+G +EEA +I+ MP V W SLL ACK+H
Sbjct: 516 FSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSV-IWGSLLAACKVH 574
Query: 678 QNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSW 737
+N+ +G+ A++LL +EP+ + YVLLSN+Y+ G W+ M++RK M++ GV K+PGCSW
Sbjct: 575 RNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSW 634
Query: 738 IEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKE 774
I+ + H F+ D SHP+ K++H L+ L+ MR E
Sbjct: 635 IKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPE 671
Score = 218 bits (556), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 149/554 (26%), Positives = 248/554 (44%), Gaps = 95/554 (17%)
Query: 91 KQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRIS---------------- 134
+ +H V K G+ S + + N L++ Y KCG L VFD++
Sbjct: 40 RYVHASVIKSGF-SNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTK 98
Query: 135 ---------------DRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSI 179
+RD +WNSM++ + ++ S+
Sbjct: 99 LGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASV 158
Query: 180 AHACSNLRDGLSLGKQVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDEAKALFGLFDDKD 238
ACS L D ++ G QVH+ ++ + +ALV MY+K G +++A+ +F D++
Sbjct: 159 LSACSGLND-MNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 239 LVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHG 298
+VSWN++I+ QN EAL ML+S V PD VTLAS + AC+ L ++ G+E+HG
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 299 YALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDG----------------------- 335
++N L ++ + +A VDMY C + + R++FD
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 336 --------ILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
+ R V WNA+IAGY +N ++EA+ LF + ES P + +++L AC
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRES-VCPTHYSFANILKAC 396
Query: 388 VRCKAFLDKEGIHGYVVKRGF------EKDKYVQNALMDMYSRMGRIEISKSIFGSMDRR 441
H +V+K GF E D +V N+L+DMY + G +E +F M R
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456
Query: 442 DIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXX 501
D VSWN MI G+ G ++AL L +M + KP+ +T++ VL C
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLESGE-----------KPDHITMIGVLSACGH 505
Query: 502 XXXXXXXXEIHAYALKQKLATDIAVG------SALIDMYAKCGCLNLSRIVFDQMPTR-N 554
H ++ + D V + ++D+ + G L ++ + ++MP + +
Sbjct: 506 AGFVEEGR--HYFS---SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPD 560
Query: 555 VITWNVLIMAYGMH 568
+ W L+ A +H
Sbjct: 561 SVIWGSLLAACKVH 574
Score = 199 bits (507), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 141/463 (30%), Positives = 227/463 (49%), Gaps = 51/463 (11%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R W + AQ +A+ +A M G + ++F +VL A +G+ND+N G Q+
Sbjct: 115 RDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQV 174
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
H + K + S V + ++LV+MY KCG++ A VFD + DR+ VSWNS+I +
Sbjct: 175 HSLIAKSPFLS-DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGP 233
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRT--FTN 211
V+P TL S+ AC++L + +G++VH +N R +
Sbjct: 234 AVEALDVFQMMLESRVEPDEVTLASVISACASL-SAIKVGQEVHGRVVKNDKLRNDIILS 292
Query: 212 NALVTMYAKLGRIDEAKALFG----------------------------LFD---DKDLV 240
NA V MYAK RI EA+ +F +F ++++V
Sbjct: 293 NAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVV 352
Query: 241 SWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYA 300
SWN +I+ +QN EEAL + + V P + A+ L AC+ L L G + H +
Sbjct: 353 SWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHV 412
Query: 301 LRN-----TDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNE 355
L++ + D+ FVG++L+DMY C ++G VF ++ R WNAMI G+A+N
Sbjct: 413 LKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNG 472
Query: 356 FDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGY-VVKRGFE----K 410
+ +EA++LF EM+ ES P+ T+ +L AC A +EG H + + R F +
Sbjct: 473 YGNEALELFREML-ESGEKPDHITMIGVLSACGH--AGFVEEGRHYFSSMTRDFGVAPLR 529
Query: 411 DKYVQNALMDMYSRMGRIEISKSIFGSMDRR-DIVSWNTMITG 452
D Y ++D+ R G +E +KS+ M + D V W +++
Sbjct: 530 DHY--TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
Score = 153 bits (386), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 188/384 (48%), Gaps = 35/384 (9%)
Query: 360 AIKLFIEMVYESDFTPNSTTLSSLLPACVRCK-AFLDKEGIHGYVVKRGFEKDKYVQNAL 418
A K F+++ + +S+ + LL +C++ K + + +H V+K GF + ++QN L
Sbjct: 2 ATKSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRL 61
Query: 419 MDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQR------- 471
+D YS+ G +E + +F M +R+I +WN+++TG G D+A +L M
Sbjct: 62 IDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWN 121
Query: 472 ------GQDDEYED---------DESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYAL 516
Q D E+ E L N + +VL C ++H+
Sbjct: 122 SMVSGFAQHDRCEEALCYFAMMHKEGFVL--NEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 517 KQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALE 576
K +D+ +GSAL+DMY+KCG +N ++ VFD+M RNV++WN LI + +G EAL+
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 577 LFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYAC 636
+F+ M+ + + P+EVT ++ +AC+ + G + + N +
Sbjct: 240 VFQMMLESR-----VEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNA 294
Query: 637 LVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPN 696
VD+ + R++EA + +MP ++ V A +S++ + + + + ++ E N
Sbjct: 295 FVDMYAKCSRIKEARFIFDSMP--IRNVIAETSMISGYAMAASTKAARLMFTKM--AERN 350
Query: 697 VASHYVLLSNIYSSAGLWDQAMDI 720
V S L++ Y+ G ++A+ +
Sbjct: 351 VVSWNALIAG-YTQNGENEEALSL 373
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/612 (35%), Positives = 339/612 (55%), Gaps = 34/612 (5%)
Query: 281 LPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRT 340
L C+ L T K +H + ++ ++ + + LV++Y C A VFD + R
Sbjct: 10 LQLCARNRTLTTAKALHAHIVK-LGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRD 68
Query: 341 VAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIH 400
W +++ + + + +F + S P+ S+L+ AC + +H
Sbjct: 69 HIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVH 128
Query: 401 GYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHD 460
+ + + D+ V+++L+DMY++ G + +K++F S+ ++ +SW M++GY GR +
Sbjct: 129 CHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKE 188
Query: 461 DALNLLHDM----------------QRGQD-------DEYEDDESIPLKPNSVTLMTVLP 497
+AL L + Q G+ E + L P + L +++
Sbjct: 189 EALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDP--LVLSSIVG 246
Query: 498 GCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVIT 557
C ++H + + + + +ALIDMYAKC + ++ +F +M R+V++
Sbjct: 247 ACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVS 306
Query: 558 WNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNL 617
W LI+ HG+ E+AL L+ MV+ ++PNEVT++ + ACSH G V++G L
Sbjct: 307 WTSLIVGMAQHGQAEKALALYDDMVSHG-----VKPNEVTFVGLIYACSHVGFVEKGREL 361
Query: 618 FHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIH 677
F +M ++GI PS HY CL+DLLGRSG ++EA LI TMP + W++LL ACK
Sbjct: 362 FQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDE-PTWAALLSACKRQ 420
Query: 678 QNLEVG-EIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCS 736
++G IA + + S Y+LLSNIY+SA LW + + R+K+ EM VRK+PG S
Sbjct: 421 GRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHS 480
Query: 737 WIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMR-KEGYVPDTSCVLHDVDDEEKETM 795
+E R E F AG+ SHP +++ L+ L + MR + GYVPDTS +LHD+D++EKE +
Sbjct: 481 SVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKL 540
Query: 796 LCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHH 855
L HSER A+A+GLL PGT IR+ KNLRVC DCHV K IS+I +REII+RD R+HH
Sbjct: 541 LFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHH 600
Query: 856 FRNGTCSCGDYW 867
F+ G CSC D+W
Sbjct: 601 FKGGKCSCNDFW 612
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 212/468 (45%), Gaps = 65/468 (13%)
Query: 190 LSLGKQVHAYTFRNGDWRTFT-NNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISS 248
L+ K +HA+ + G + N LV +Y K G A +F +D ++W +V+++
Sbjct: 19 LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA 78
Query: 249 LSQNDRFEEALLFLYHMLQSG-VRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLI 307
L+Q + + L + S +RPD ++ + AC++L + G+++H + + ++
Sbjct: 79 LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFI-VSEYA 137
Query: 308 DNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLF--- 364
++ V S+LVDMY C + + VFD I + W AM++GYA++ +EA++LF
Sbjct: 138 NDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRIL 197
Query: 365 ----------------------------IEMVYESDFTPNSTTLSSLLPACVRCKAFLDK 396
EM E + LSS++ AC A +
Sbjct: 198 PVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAG 257
Query: 397 EGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVC 456
+HG V+ GF+ ++ NAL+DMY++ + +K IF M RD+VSW ++I G
Sbjct: 258 RQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQH 317
Query: 457 GRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYAL 516
G+ + AL L Y+D S +KPN VT + ++ C E L
Sbjct: 318 GQAEKALAL-----------YDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRE-----L 361
Query: 517 KQKLATDIAVG------SALIDMYAKCGCLNLSRIVFDQMP-TRNVITWNVLIMAYGMHG 569
Q + D + + L+D+ + G L+ + + MP + TW L+ A G
Sbjct: 362 FQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQG 421
Query: 570 KGEEALELFRRMVAEKDSNKEIRPNEVTYIA---IFAACSHSGMVDEG 614
+G+ + + +V+ S K P+ TYI I+A+ S G V E
Sbjct: 422 RGQMGIRIADHLVS---SFKLKDPS--TYILLSNIYASASLWGKVSEA 464
Score = 136 bits (342), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 185/419 (44%), Gaps = 44/419 (10%)
Query: 78 LKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRD 137
L+ A L K +H H+ K G +AN+LVN+YGKCG + A VFD + RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQC-CPLANTLVNVYGKCGAASHALQVFDEMPHRD 68
Query: 138 HVSWNSMIAAACRFXXX-XXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQV 196
H++W S++ A + + P F ++ AC+NL + G+QV
Sbjct: 69 HIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANL-GSIDHGRQV 127
Query: 197 HAYTFRNGDWRT--FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDR 254
H + F ++ ++LV MYAK G ++ AKA+F K+ +SW ++S +++ R
Sbjct: 128 HCH-FIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGR 186
Query: 255 FEEAL----------LFLYHMLQSGVRPDG----------------------VTLASALP 282
EEAL L+ + L SG G + L+S +
Sbjct: 187 KEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVG 246
Query: 283 ACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVA 342
AC++L G+++HG + F+ +AL+DMY C + +F + R V
Sbjct: 247 ACANLAASIAGRQVHGLVI-ALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVV 305
Query: 343 VWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDK--EGIH 400
W ++I G A++ ++A+ L+ +MV PN T L+ AC F++K E
Sbjct: 306 SWTSLIVGMAQHGQAEKALALYDDMVSHG-VKPNEVTFVGLIYACSHV-GFVEKGRELFQ 363
Query: 401 GYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD-RRDIVSWNTMITGYVVCGR 458
G L+D+ R G ++ ++++ +M D +W +++ GR
Sbjct: 364 SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGR 422
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 174/411 (42%), Gaps = 77/411 (18%)
Query: 69 PDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHH 128
PD+F F A++KA A + ++ G+Q+H H YA+ V V +SLV+MY KCG L A
Sbjct: 103 PDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEV-VKSSLVDMYAKCGLLNSAKA 161
Query: 129 VFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNV------------------- 169
VFD I ++ +SW +M++ + N+
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 221
Query: 170 ---------------DPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNA 213
DP L SI AC+NL ++ G+QVH G D F +NA
Sbjct: 222 FSVFTEMRRERVDILDP--LVLSSIVGACANLAASIA-GRQVHGLVIALGFDSCVFISNA 278
Query: 214 LVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPD 273
L+ MYAK + AK +F +D+VSW ++I ++Q+ + E+AL M+ GV+P+
Sbjct: 279 LIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPN 338
Query: 274 GVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVF 333
VT + ACSH+ + G+E+ + D G
Sbjct: 339 EVTFVGLIYACSHVGFVEKGRELFQSMTK------------------------DYG---- 370
Query: 334 DGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAF 393
+R ++ + ++ R+ DEA L ++ F P+ T ++LL AC R
Sbjct: 371 ---IRPSLQHYTCLLDLLGRSGLLDEAENL----IHTMPFPPDEPTWAALLSACKRQGRG 423
Query: 394 LDKEGIHGYVVKRGFEKDKYVQNALMDMY---SRMGRIEISKSIFGSMDRR 441
I ++V KD L ++Y S G++ ++ G M+ R
Sbjct: 424 QMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVR 474
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/612 (35%), Positives = 330/612 (53%), Gaps = 60/612 (9%)
Query: 294 KEIHGYALRNTDLIDNSFVGS-----ALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMI 348
++IH + L D+ VG AL D K D + D + T+ N+MI
Sbjct: 23 RQIHAKLYVDGTLKDDHLVGHFVKAVALSDH----KYLDYANQILDRSEKPTLFALNSMI 78
Query: 349 AGYARNEFDDEAIKLFIEMVYE-SDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRG 407
+ ++ +++ + ++ +D P++ T++ L+ AC + +HG ++RG
Sbjct: 79 RAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRG 138
Query: 408 FEKDKYVQNALMDMY-------------------------------SRMGRIEISKSIFG 436
F+ D +VQ L+ +Y +R G + ++ +F
Sbjct: 139 FDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFE 198
Query: 437 SMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVL 496
M RD ++WN MI+GY G +ALN+ H MQ +K N V +++VL
Sbjct: 199 GMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG-----------VKVNGVAMISVL 247
Query: 497 PGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVI 556
C H+Y + K+ + + + L+D+YAKCG + + VF M +NV
Sbjct: 248 SACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVY 307
Query: 557 TWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLN 616
TW+ + M+G GE+ LELF M + PN VT++++ CS G VDEG
Sbjct: 308 TWSSALNGLAMNGFGEKCLELFSLM-----KQDGVTPNAVTFVSVLRGCSVVGFVDEGQR 362
Query: 617 LFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDA-WSSLLGACK 675
F +M+ GIEP +HY CLVDL R+GR+E+A +I+ MP MK A WSSLL A +
Sbjct: 363 HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMP--MKPHAAVWSSLLHASR 420
Query: 676 IHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGC 735
+++NLE+G +A+K++L LE YVLLSNIY+ + WD +R+ MK GVRK+PGC
Sbjct: 421 MYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGC 480
Query: 736 SWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETM 795
S +E EVH+F GD SHP+ ++ +++ +R+R GY DT+ V+ D+D+EEKE
Sbjct: 481 SVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDA 540
Query: 796 LCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHH 855
LC HSE+ AIAFG+++ IR+ KNLRVC DCH + ISKI +REII+RD RFHH
Sbjct: 541 LCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHH 600
Query: 856 FRNGTCSCGDYW 867
F++G CSC +W
Sbjct: 601 FKDGHCSCNGFW 612
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 163/362 (45%), Gaps = 41/362 (11%)
Query: 126 AHHVFDRISDRDHVSWNSMIAAACR--FXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHAC 183
A+ + DR + NSMI A C+ ++ P ++T+ + AC
Sbjct: 59 ANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQAC 118
Query: 184 SNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDE---------------- 226
+ LR G QVH T R G D L+++YA+LG +D
Sbjct: 119 TGLR-MRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCR 177
Query: 227 ---------------AKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVR 271
A+ LF ++D ++WN +IS +Q EAL + M GV+
Sbjct: 178 TAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVK 237
Query: 272 PDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRW 331
+GV + S L AC+ L L G+ H Y RN I + + LVD+Y C +K
Sbjct: 238 VNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKI-TVRLATTLVDLYAKCGDMEKAME 296
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCK 391
VF G+ + V W++ + G A N F ++ ++LF ++ + TPN+ T S+L C
Sbjct: 297 VFWGMEEKNVYTWSSALNGLAMNGFGEKCLELF-SLMKQDGVTPNAVTFVSVLRGC-SVV 354
Query: 392 AFLDKEGIHGYVVKRGFEKDKYVQN--ALMDMYSRMGRIEISKSIFGSMDRRDIVS-WNT 448
F+D+ H ++ F + +++ L+D+Y+R GR+E + SI M + + W++
Sbjct: 355 GFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSS 414
Query: 449 MI 450
++
Sbjct: 415 LL 416
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 148/342 (43%), Gaps = 39/342 (11%)
Query: 43 LRLQAQSSSFLQAISTYANMVAAG--VPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKF 100
+R +S ++ Y ++++G + PDN+ +++A G+ G Q+HG +
Sbjct: 78 IRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRR 137
Query: 101 GYASTSVAVANSLVNMYG-------------------------------KCGDLAGAHHV 129
G+ V L+++Y +CGD+ A +
Sbjct: 138 GF-DNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKL 196
Query: 130 FDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDG 189
F+ + +RD ++WN+MI+ + V ++S+ AC+ L
Sbjct: 197 FEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQL-GA 255
Query: 190 LSLGKQVHAYTFRNGDWRTFT-NNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISS 248
L G+ H+Y RN T LV +YAK G +++A +F ++K++ +W++ ++
Sbjct: 256 LDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNG 315
Query: 249 LSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLID 308
L+ N E+ L M Q GV P+ VT S L CS + + G+ H ++RN I+
Sbjct: 316 LAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR-HFDSMRNEFGIE 374
Query: 309 NSFVG-SALVDMYCNCKKADKGRWVFDGI-LRRTVAVWNAMI 348
LVD+Y + + + + ++ AVW++++
Sbjct: 375 PQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 103/238 (43%), Gaps = 7/238 (2%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R P AW + AQ +A++ + M GV + A +VL A + L+ G+
Sbjct: 203 RDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWA 262
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
H ++ + +V +A +LV++Y KCGD+ A VF + +++ +W+S +
Sbjct: 263 HSYIER-NKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGF 321
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG---DWRTFT 210
V P + T VS+ CS + G Q H + RN + +
Sbjct: 322 GEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVV--GFVDEGQRHFDSMRNEFGIEPQLEH 379
Query: 211 NNALVTMYAKLGRIDEAKALFGLFDDKDLVS-WNTVISSLSQNDRFEEALLFLYHMLQ 267
LV +YA+ GR+++A ++ K + W++++ + E +L ML+
Sbjct: 380 YGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLE 437
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/773 (29%), Positives = 388/773 (50%), Gaps = 106/773 (13%)
Query: 192 LGKQVHAYTFRNG--DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSL 249
LG +H + G + T +A + Y + + A LF +D ++WN ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 250 SQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDN 309
++ +E+A+ M SG + T+ L CS+ E G++IHGY LR L N
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR-LGLESN 123
Query: 310 SFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEM-- 367
+ ++L+ MY K + R VF+ + R ++ WN++++ Y + + D+AI L EM
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 368 --------------------------------VYESDFTPNSTTLSSLLPACVRCKAFLD 395
+ + P+++++SSLL A
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 396 KEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITG--- 452
+ IHGY+++ D YV+ L+DMY + G + ++ +F MD ++IV+WN++++G
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSY 303
Query: 453 --------------------------------YVVCGRHDDALNLLHDMQR--------- 471
Y G+ + AL+++ M+
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVS 363
Query: 472 --------GQDDEYEDDESIPLK-------PNSVTLMTVLPGCXXXXXXXXXXEIHAYAL 516
++ + + + +K PN+ T+ T+L E+H + L
Sbjct: 364 WTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCL 423
Query: 517 KQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALE 576
++ L D V +AL+DMY K G L + +F + +++ +WN ++M Y M G+GEE +
Sbjct: 424 RKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIA 483
Query: 577 LFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYAC 636
F M+ + P+ +T+ ++ + C +SG+V EG F M++ +GI P+ +H +C
Sbjct: 484 AFSVML-----EAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSC 538
Query: 637 LVDLLGRSGRVEEAYKLIKTMPSNMKKVDA--WSSLLGACKIHQNLEVGEIAAKQLLVLE 694
+VDLLGRSG ++EA+ I+TM K DA W + L +CKIH++LE+ EIA K+L VLE
Sbjct: 539 MVDLLGRSGYLDEAWDFIQTMS---LKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLE 595
Query: 695 PNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASH 754
P+ +++Y+++ N+YS+ W+ IR M+ VR + SWI+ VH F A +H
Sbjct: 596 PHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTH 655
Query: 755 PQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPP 814
P +++ L L+ M+K GYVPDTSC+ D+ D EKE +L GH+E+LA+ +GL+
Sbjct: 656 PDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKG 715
Query: 815 GTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
IRV KN +C+D H K++S + +REI+L++ R HHFR+G CSC D W
Sbjct: 716 LAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 145 bits (367), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 164/337 (48%), Gaps = 42/337 (12%)
Query: 55 AISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLV 114
AI+ M AG+ P + ++L+A A L LGK IHG++ + V V +L+
Sbjct: 209 AIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILR-NQLWYDVYVETTLI 267
Query: 115 NMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSF 174
+MY K G L A VFD + ++ V+WNS+++
Sbjct: 268 DMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSG--------------------------- 300
Query: 175 TLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLF 234
+++AC L+D +L ++ + T N+L + YA LG+ ++A + G
Sbjct: 301 ----LSYACL-LKDAEALMIRMEKEGIKPD---AITWNSLASGYATLGKPEKALDVIGKM 352
Query: 235 DDK----DLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEML 290
+K ++VSW + S S+N F AL M + GV P+ T+++ L L +L
Sbjct: 353 KEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLL 412
Query: 291 RTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAG 350
+GKE+HG+ LR +LI +++V +ALVDMY +F GI +++A WN M+ G
Sbjct: 413 HSGKEVHGFCLRK-NLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMG 471
Query: 351 YARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
YA +E I F M+ E+ P++ T +S+L C
Sbjct: 472 YAMFGRGEEGIAAFSVML-EAGMEPDAITFTSVLSVC 507
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 228/705 (32%), Positives = 369/705 (52%), Gaps = 37/705 (5%)
Query: 169 VDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG--DWRTFTNNALVTMYAKLGRIDE 226
V +S++ + AC LR LS G+ +H R G + N ++ MY + +++
Sbjct: 79 VSVSSYSYQCLFEACRELR-SLSHGRLLHD-RMRMGIENPSVLLQNCVLQMYCECRSLED 136
Query: 227 AKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH 286
A LF + + VS T+IS+ ++ ++A+ ML SG +P + L + +
Sbjct: 137 ADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVN 196
Query: 287 LEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNA 346
L G++IH + +R L N+ + + +V+MY C + VFD + +
Sbjct: 197 PRALDFGRQIHAHVIR-AGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTG 255
Query: 347 MIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKR 406
++ GY + +A+KLF+++V E +S S +L AC + + IH V K
Sbjct: 256 LMVGYTQAGRARDALKLFVDLVTEG-VEWDSFVFSVVLKACASLEELNLGKQIHACVAKL 314
Query: 407 GFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLL 466
G E + V L+D Y + E + F + + VSW+ +I+GY + ++A+
Sbjct: 315 GLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTF 374
Query: 467 HDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAV 526
++ + SI NS T ++ C ++HA A+K+ L
Sbjct: 375 KSLR-------SKNASIL---NSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG 424
Query: 527 GSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKD 586
SALI MY+KCGCL+ + VF+ M +++ W I + +G EAL LF +MV+
Sbjct: 425 ESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCG- 483
Query: 587 SNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGR 646
++PN VT+IA+ ACSH+G+V++G + TM + + P+ DHY C++D+ RSG
Sbjct: 484 ----MKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGL 539
Query: 647 VEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSN 706
++EA K +K MP + +W L C H+NLE+GEIA ++L L+P + YVL N
Sbjct: 540 LDEALKFMKNMPFEPDAM-SWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFN 598
Query: 707 IYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLEN 766
+Y+ AG W++A ++ K M E ++KE CSWI+ + ++H+F+ GD HPQ++E++E L+
Sbjct: 599 LYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKE 658
Query: 767 LLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLL----NTPPGTTIRVTK 822
+G++ + + E+ L HSERLAIAFGL+ N P I+V K
Sbjct: 659 F------DGFMEGD---MFQCNMTERREQLLDHSERLAIAFGLISVHGNAP--APIKVFK 707
Query: 823 NLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
NLR C DCH K +S + EI++RD RRFHHF+ G CSC DYW
Sbjct: 708 NLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 148/563 (26%), Positives = 241/563 (42%), Gaps = 20/563 (3%)
Query: 42 HLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFG 101
HL ++ +A M AGV ++++ + +A + L+ G+ +H + + G
Sbjct: 54 HLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRM-RMG 112
Query: 102 YASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXX 161
+ SV + N ++ MY +C L A +FD +S+ + VS +MI+A
Sbjct: 113 IENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLF 172
Query: 162 XXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDW-RTFTNNALVTMYAK 220
P S ++ + N R L G+Q+HA+ R G T +V MY K
Sbjct: 173 SGMLASGDKPPSSMYTTLLKSLVNPR-ALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVK 231
Query: 221 LGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASA 280
G + AK +F K V+ ++ +Q R +AL ++ GV D +
Sbjct: 232 CGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVV 291
Query: 281 LPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRT 340
L AC+ LE L GK+IH + L VG+ LVD Y C + F I
Sbjct: 292 LKACASLEELNLGKQIHA-CVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPN 350
Query: 341 VAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIH 400
W+A+I+GY + +EA+K F + ++ NS T +S+ AC +H
Sbjct: 351 DVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVH 410
Query: 401 GYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHD 460
+KR +Y ++AL+ MYS+ G ++ + +F SMD DIV+W I+G+ G
Sbjct: 411 ADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNAS 470
Query: 461 DALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQ-K 519
+AL L M S +KPNSVT + VL C L++
Sbjct: 471 EALRLFEKMV-----------SCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYN 519
Query: 520 LATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR-NVITWNVLIMAYGMHGK---GEEAL 575
+A I +ID+YA+ G L+ + MP + ++W + H GE A
Sbjct: 520 VAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAG 579
Query: 576 ELFRRMVAEKDSNKEIRPNEVTY 598
E R++ E + + N T+
Sbjct: 580 EELRQLDPEDTAGYVLPFNLYTW 602
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 234/723 (32%), Positives = 388/723 (53%), Gaps = 42/723 (5%)
Query: 86 DLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMI 145
+L G+ +HG + + G AST + AN LVN Y KCG LA AH +F+ I +D VSWNS+I
Sbjct: 29 NLVAGRAVHGQIIRTG-ASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLI 87
Query: 146 AAACR---FXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFR 202
+ ++ P ++TL I A S+L+ ++G+Q HA +
Sbjct: 88 TGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSS-TVGRQAHALVVK 146
Query: 203 NGDW-RTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEAL-- 259
+ + + +LV MY K G +++ +F +++ +W+T++S + R EEA+
Sbjct: 147 MSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKV 206
Query: 260 --LFLYHMLQSGVRPDGVTLA--SALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSA 315
LFL + G D V A S+L A ++ + G++IH ++N L+ + +A
Sbjct: 207 FNLFLREK-EEGSDSDYVFTAVLSSLAATIYVGL---GRQIHCITIKN-GLLGFVALSNA 261
Query: 316 LVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTP 375
LV MY C+ ++ +FD R W+AM+ GY++N EA+KLF M + + P
Sbjct: 262 LVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM-FSAGIKP 320
Query: 376 NSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIF 435
+ T+ +L AC + + +H +++K GFE+ + AL+DMY++ G + ++ F
Sbjct: 321 SEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGF 380
Query: 436 GSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTV 495
+ RD+ W ++I+GYV +++AL L M+ + + PN T+ +V
Sbjct: 381 DCLQERDVALWTSLISGYVQNSDNEEALILYRRMK-----------TAGIIPNDPTMASV 429
Query: 496 LPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNV 555
L C ++H + +K ++ +GSAL MY+KCG L +VF + P ++V
Sbjct: 430 LKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDV 489
Query: 556 ITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGL 615
++WN +I +G+G+EALELF M+AE + P++VT++ I +ACSH G V+ G
Sbjct: 490 VSWNAMISGLSHNGQGDEALELFEEMLAEG-----MEPDDVTFVNIISACSHKGFVERGW 544
Query: 616 NLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACK 675
F+ M G++P DHYAC+VDLL R+G+++EA + I++ + + W LL ACK
Sbjct: 545 FYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANID-HGLCLWRILLSACK 603
Query: 676 IHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGC 735
H E+G A ++L+ L +S YV LS IY++ G + K M+ GV KE GC
Sbjct: 604 NHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGC 663
Query: 736 SWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVP--DTSCVLHDVDDEEKE 793
SWIE +++ H F+ GD HP +E + + + ++M +EG+V D+S V +EE+
Sbjct: 664 SWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSSFV-----EEEEG 718
Query: 794 TML 796
T L
Sbjct: 719 TQL 721
Score = 190 bits (483), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 195/372 (52%), Gaps = 8/372 (2%)
Query: 71 NFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVF 130
++ F AVL + A + LG+QIH K G VA++N+LV MY KC L A +F
Sbjct: 221 DYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF-VALSNALVTMYSKCESLNEACKMF 279
Query: 131 DRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGL 190
D DR+ ++W++M+ + + P+ +T+V + +ACS++ L
Sbjct: 280 DSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICY-L 338
Query: 191 SLGKQVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSL 249
GKQ+H++ + G R F ALV MYAK G + +A+ F ++D+ W ++IS
Sbjct: 339 EEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGY 398
Query: 250 SQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDN 309
QN EEAL+ M +G+ P+ T+AS L ACS L L GK++HG+ +++ ++
Sbjct: 399 VQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEV 458
Query: 310 SFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVY 369
+GSAL MY C + G VF + V WNAMI+G + N DEA++LF EM+
Sbjct: 459 P-IGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLA 517
Query: 370 ESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQN--ALMDMYSRMGR 427
E P+ T +++ AC K F+++ + ++ D V + ++D+ SR G+
Sbjct: 518 EG-MEPDDVTFVNIISACSH-KGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQ 575
Query: 428 IEISKSIFGSMD 439
++ +K S +
Sbjct: 576 LKEAKEFIESAN 587
Score = 146 bits (368), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 131/261 (50%), Gaps = 3/261 (1%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+ W + +Q+ L+A+ ++ M +AG+ P + VL A + + L GKQ+
Sbjct: 285 RNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQL 344
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
H + K G+ A +LV+MY K G LA A FD + +RD W S+I+ +
Sbjct: 345 HSFLLKLGFERHLFAT-TALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSD 403
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNN 212
+ P T+ S+ ACS+L L LGKQVH +T ++G +
Sbjct: 404 NEEALILYRRMKTAGIIPNDPTMASVLKACSSLAT-LELGKQVHGHTIKHGFGLEVPIGS 462
Query: 213 ALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRP 272
AL TMY+K G +++ +F +KD+VSWN +IS LS N + +EAL ML G+ P
Sbjct: 463 ALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEP 522
Query: 273 DGVTLASALPACSHLEMLRTG 293
D VT + + ACSH + G
Sbjct: 523 DDVTFVNIISACSHKGFVERG 543
Score = 106 bits (264), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 143/306 (46%), Gaps = 20/306 (6%)
Query: 369 YESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI 428
++++ P+++TL L + + + +HG +++ G N L++ Y++ G++
Sbjct: 6 FQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKL 65
Query: 429 EISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDA---LNLLHDMQRGQDDEYEDDESIPL 485
+ SIF ++ +D+VSWN++ITGY G + + L +M R QD +
Sbjct: 66 AKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREM-RAQD----------I 114
Query: 486 KPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRI 545
PN+ TL + + HA +K DI V ++L+ MY K G +
Sbjct: 115 LPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLK 174
Query: 546 VFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAAC 605
VF MP RN TW+ ++ Y G+ EEA+++F + EK+ + ++ + A+ ++
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSD---SDYVFTAVLSSL 231
Query: 606 SHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVD 665
+ + V G + H + +G+ LV + + + EA K+ + S +
Sbjct: 232 AATIYVGLGRQI-HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDS--SGDRNSI 288
Query: 666 AWSSLL 671
WS+++
Sbjct: 289 TWSAMV 294
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 103/237 (43%), Gaps = 27/237 (11%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R + W + Q+S +A+ Y M AG+ P++ +VLKA + + L LGKQ+
Sbjct: 386 RDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQV 445
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
HGH K G+ V + ++L MY KCG L + VF R ++D VSWN+MI+
Sbjct: 446 HGHTIKHGFG-LEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQ 504
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSN-------------LRDGLSLGKQVHAYT 200
++P T V+I ACS+ + D + L +V Y
Sbjct: 505 GDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYA 564
Query: 201 FRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFD-DKDLVSWNTVISSLSQNDRFE 256
+V + ++ G++ EAK + D L W ++S+ + + E
Sbjct: 565 ------------CMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCE 609
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 228/698 (32%), Positives = 361/698 (51%), Gaps = 27/698 (3%)
Query: 176 LVSIAHACSNLRDGLSLGKQVHAYTF-RNGDWRT---FTNNALVTMYAKLGRIDEAKALF 231
L + C+N L +G+ +HA+ N R + N+L+ +Y K A+ LF
Sbjct: 34 LNELLKVCAN-SSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLF 92
Query: 232 GLFDDKDLVSWNTVISSLSQNDRFE-EALLFLYHMLQSG-VRPDGVTLASALPACSHLEM 289
L ++++VSW ++ QN F+ E L M SG RP+ +CS+
Sbjct: 93 DLMPERNVVSWCAMMKGY-QNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGR 151
Query: 290 LRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIA 349
+ GK+ HG L+ LI + FV + LV MY C + V D + ++V+++ ++
Sbjct: 152 IEEGKQFHGCFLK-YGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALS 210
Query: 350 GYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFE 409
GY E + + + E DF N+ T S L + +H +V+ GF
Sbjct: 211 GYLECGAFKEGLDVLRKTANE-DFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFN 269
Query: 410 KDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDM 469
+ AL++MY + G++ ++ +F ++I T++ Y ++ALNL M
Sbjct: 270 AEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKM 329
Query: 470 QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSA 529
D + +P PN T +L +H LK + VG+A
Sbjct: 330 ---------DTKEVP--PNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNA 378
Query: 530 LIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNK 589
L++MYAK G + +R F M R+++TWN +I HG G EALE F RM+ +
Sbjct: 379 LVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI-- 436
Query: 590 EIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEE 649
PN +T+I + ACSH G V++GL+ F+ + ++P HY C+V LL ++G ++
Sbjct: 437 ---PNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKD 493
Query: 650 AYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYS 709
A ++T P V AW +LL AC + +N +G+ A+ + PN + YVLLSNI++
Sbjct: 494 AEDFMRTAPIEWDVV-AWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHA 552
Query: 710 SAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQ 769
+ W+ +R M GV+KEPG SWI R++ H FLA D HP+ ++ ++ ++
Sbjct: 553 KSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMS 612
Query: 770 RMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCND 829
+++ GY PD + HDVD+E++E L HSE+LA+A+GL+ TP + + VTKN+R+C+D
Sbjct: 613 KIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDD 672
Query: 830 CHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
CH A K ISKI R I++RD RFHHF +G CSC DYW
Sbjct: 673 CHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 133 bits (334), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 205/494 (41%), Gaps = 20/494 (4%)
Query: 77 VLKAAAGVNDLNLGKQIHGHVFKFGYASTS--VAVANSLVNMYGKCGDLAGAHHVFDRIS 134
+LK A + L +G+ IH H+ +S + NSL+N+Y KC + A +FD +
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 135 DRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD-PTSFTLVSIAHACSNLRDGLSLG 193
+R+ VSW +M+ P F + +CSN + G
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSN-SGRIEEG 155
Query: 194 KQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQN 252
KQ H + G F N LV MY+ EA + DL +++ +S +
Sbjct: 156 KQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLEC 215
Query: 253 DRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFV 312
F+E L L + +T S+L S+L L ++H +R +
Sbjct: 216 GAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEAC 275
Query: 313 GSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESD 372
G AL++MY C K + VFD + + + ++ Y +++ +EA+ LF +M +
Sbjct: 276 G-ALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMD-TKE 333
Query: 373 FTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISK 432
PN T + LL + + +HG V+K G+ V NAL++MY++ G IE ++
Sbjct: 334 VPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDAR 393
Query: 433 SIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTL 492
F M RDIV+WNTMI+G G +AL M + PN +T
Sbjct: 394 KAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGE-----------IPNRITF 442
Query: 493 MTVLPGCXXXXXXXXXXEIHAYALKQ-KLATDIAVGSALIDMYAKCGCLNLSRIVFDQMP 551
+ VL C +K+ + DI + ++ + +K G + P
Sbjct: 443 IGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAP 502
Query: 552 TR-NVITWNVLIMA 564
+V+ W L+ A
Sbjct: 503 IEWDVVAWRTLLNA 516
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 192/428 (44%), Gaps = 12/428 (2%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVP-PDNFAFPAVLKAAAGVNDLNLGKQ 92
R+ +W ++ S + + + +M +G P+ F V K+ + + GKQ
Sbjct: 98 RNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQ 157
Query: 93 IHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFX 152
HG K+G S V N+LV MY C A V D + D ++S ++
Sbjct: 158 FHGCFLKYGLISHEF-VRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216
Query: 153 XXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTN 211
+ + T +S SNLRD L+L QVH+ R G +
Sbjct: 217 AFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRD-LNLALQVHSRMVRFGFNAEVEAC 275
Query: 212 NALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVR 271
AL+ MY K G++ A+ +F +++ T++ + Q+ FEEAL M V
Sbjct: 276 GALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVP 335
Query: 272 PDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRW 331
P+ T A L + + L +L+ G +HG L+ + ++ VG+ALV+MY + R
Sbjct: 336 PNEYTFAILLNSIAELSLLKQGDLLHGLVLK-SGYRNHVMVGNALVNMYAKSGSIEDARK 394
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCK 391
F G+ R + WN MI+G + + EA++ F M++ + PN T +L AC
Sbjct: 395 AFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI-PNRITFIGVLQACSHI- 452
Query: 392 AFLDKEGIHGY-VVKRGFEKDKYVQN--ALMDMYSRMGRIEISKSIFGSMD-RRDIVSWN 447
F++ +G+H + + + F+ +Q+ ++ + S+ G + ++ + D+V+W
Sbjct: 453 GFVE-QGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWR 511
Query: 448 TMITGYVV 455
T++ V
Sbjct: 512 TLLNACYV 519
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 224/736 (30%), Positives = 381/736 (51%), Gaps = 35/736 (4%)
Query: 70 DNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAG---- 125
D + + + LKA A +L GK +H H+ + S+ V V NSL+NMY C +
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRV-VHNSLMNMYVSCLNAPDCFEY 164
Query: 126 --AHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHAC 183
VFD + ++ V+WN++I+ + V P+ + V++ A
Sbjct: 165 DVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAV 224
Query: 184 SNLRDGLSLGKQVHAYTFRNGDWRT---FTNNALVTMYAKLGRIDEAKALFGLFDDKDLV 240
S R + + + GD F ++ ++MYA+LG I+ ++ +F ++++
Sbjct: 225 SISRS-IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIE 283
Query: 241 SWNTVISSLSQNDRFEEAL-LFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGY 299
WNT+I QND E++ LFL + + D VT A A S L+ + G++ HG+
Sbjct: 284 VWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGF 343
Query: 300 ALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDE 359
+N + V S +V MY C K VF + R V WN MI+ + +N DDE
Sbjct: 344 VSKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDE 402
Query: 360 AIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALM 419
+ L EM + F + T+++LL A + + H +++++G + + + + L+
Sbjct: 403 GLMLVYEM-QKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLI 460
Query: 420 DMYSRMGRIEISKSIF--GSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEY 477
DMYS+ G I IS+ +F RD +WN+MI+GY G + + M
Sbjct: 461 DMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQN---- 516
Query: 478 EDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKC 537
++PN+VT+ ++LP C ++H ++++Q L ++ V SAL+DMY+K
Sbjct: 517 -------IRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKA 569
Query: 538 GCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVT 597
G + + +F Q RN +T+ +I+ YG HG GE A+ LF M I+P+ +T
Sbjct: 570 GAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSM-----QESGIKPDAIT 624
Query: 598 YIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTM 657
++A+ +ACS+SG++DEGL +F M+ + I+PSS+HY C+ D+LGR GRV EAY+ +K +
Sbjct: 625 FVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGL 684
Query: 658 PSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLE--PNVASHYVLLSNIYSSAGLWD 715
+ W SLLG+CK+H LE+ E +++L + N + + VLLSN+Y+ W
Sbjct: 685 GEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWK 744
Query: 716 QAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEG 775
+R+ M+E G++KE G S IE V+ F++ D HP S E+++ ++ L + MR +
Sbjct: 745 SVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDS 804
Query: 776 YVPDTSCVLHDVDDEE 791
++ V ++ +E
Sbjct: 805 FLTTLPTVTPSLELDE 820
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/517 (25%), Positives = 238/517 (46%), Gaps = 36/517 (6%)
Query: 227 AKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSG--VRPDGVTLASALPAC 284
A+ LF V WNT+I N+ EALLF M ++ D T +S L AC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 285 SHLEMLRTGKEIHGYALRNTDLIDNS--FVGSALVDMYCNCKKA------DKGRWVFDGI 336
+ + L+ GK +H + +R + NS V ++L++MY +C A D R VFD +
Sbjct: 118 AETKNLKAGKAVHCHLIR---CLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNM 174
Query: 337 LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDK 396
R+ V WN +I+ Y + + EA + F M+ + P+ + ++ PA ++
Sbjct: 175 RRKNVVAWNTLISWYVKTGRNAEACRQFGIMM-RMEVKPSPVSFVNVFPAVSISRSIKKA 233
Query: 397 EGIHGYVVKRGFE--KDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYV 454
+G ++K G E KD +V ++ + MY+ +G IE S+ +F S R+I WNTMI YV
Sbjct: 234 NVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYV 293
Query: 455 VCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAY 514
+++ L ++ E DE VT + + H +
Sbjct: 294 QNDCLVESIELF--LEAIGSKEIVSDE--------VTYLLAASAVSALQQVELGRQFHGF 343
Query: 515 ALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEA 574
K I + ++L+ MY++CG ++ S VF M R+V++WN +I A+ +G +E
Sbjct: 344 VSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEG 403
Query: 575 LELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHY 634
L L M + + + +T A+ +A S+ + G H GI+ +
Sbjct: 404 LMLVYEM-----QKQGFKIDYITVTALLSAASNLRNKEIGKQT-HAFLIRQGIQFEGMN- 456
Query: 635 ACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLE 694
+ L+D+ +SG + + KL + + W+S++ + + E + +++ LE
Sbjct: 457 SYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKM--LE 514
Query: 695 PNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRK 731
N+ + V +++I + ++D+ K++ +R+
Sbjct: 515 QNIRPNAVTVASILPACSQIG-SVDLGKQLHGFSIRQ 550
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 166/362 (45%), Gaps = 27/362 (7%)
Query: 321 CNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTP-NSTT 379
C R +FD I + T +WN +I G+ N EA+ + M + FT ++ T
Sbjct: 50 CQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYT 109
Query: 380 LSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSR------MGRIEISKS 433
SS L AC K + +H ++++ + V N+LM+MY ++ +
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRK 169
Query: 434 IFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLM 493
+F +M R+++V+WNT+I+ YV GR+ +A M R + +KP+ V+ +
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMR-----------MEVKPSPVSFV 218
Query: 494 TVLPGCXXXXXXXXXXEIHAYALK--QKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMP 551
V P + LK + D+ V S+ I MYA+ G + SR VFD
Sbjct: 219 NVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCV 278
Query: 552 TRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMV 611
RN+ WN +I Y + E++ELF + +KEI +EVTY+ +A S V
Sbjct: 279 ERNIEVWNTMIGVYVQNDCLVESIELFLEAIG----SKEIVSDEVTYLLAASAVSALQQV 334
Query: 612 DEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLL 671
+ G FH + + E L+ + R G V +++ + +M + V +W++++
Sbjct: 335 ELGRQ-FHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRE--RDVVSWNTMI 391
Query: 672 GA 673
A
Sbjct: 392 SA 393
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 118/238 (49%), Gaps = 6/238 (2%)
Query: 62 MVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCG 121
M G D A+L AA+ + + +GKQ H + + G + + L++MY K G
Sbjct: 410 MQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE--GMNSYLIDMYSKSG 467
Query: 122 DLAGAHHVFD--RISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSI 179
+ + +F+ ++RD +WNSMI+ + N+ P + T+ SI
Sbjct: 468 LIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASI 527
Query: 180 AHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKD 238
ACS + + LGKQ+H ++ R D F +ALV MY+K G I A+ +F +++
Sbjct: 528 LPACSQI-GSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERN 586
Query: 239 LVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEI 296
V++ T+I Q+ E A+ M +SG++PD +T + L ACS+ ++ G +I
Sbjct: 587 SVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKI 644
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 102/230 (44%), Gaps = 8/230 (3%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R + W + Q+ + + M+ + P+ ++L A + + ++LGKQ+
Sbjct: 484 RDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQL 543
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
HG + Y +V VA++LV+MY K G + A +F + +R+ V++ +MI +
Sbjct: 544 HGFSIR-QYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGM 602
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSN---LRDGLSLGKQVHAYTFRNGDWRTFT 210
+ P + T V++ ACS + +GL + +++ N +
Sbjct: 603 GERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMRE--VYNIQPSSEH 660
Query: 211 NNALVTMYAKLGRIDEAKALF-GLFDDKDLVS-WNTVISSLSQNDRFEEA 258
+ M ++GR++EA GL ++ ++ W +++ S + E A
Sbjct: 661 YCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELA 710
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/525 (39%), Positives = 301/525 (57%), Gaps = 18/525 (3%)
Query: 344 WNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYV 403
WN +I G++ + +I + M+ S P+ T + L +C R K+ IHG V
Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSV 133
Query: 404 VKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDAL 463
++ GF D V +L+ YS G +EI+ +F M RD+VSWN MI + G H+ AL
Sbjct: 134 IRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQAL 193
Query: 464 NLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATD 523
++ M G + D S TL+ +L C +H A + +
Sbjct: 194 SMYKRM--GNEGVCGD---------SYTLVALLSSCAHVSALNMGVMLHRIACDIRCESC 242
Query: 524 IAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVA 583
+ V +ALIDMYAKCG L + VF+ M R+V+TWN +I+ YG+HG G EA+ FR+MVA
Sbjct: 243 VFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVA 302
Query: 584 EKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGR 643
+RPN +T++ + CSH G+V EG+ F M + + P+ HY C+VDL GR
Sbjct: 303 SG-----VRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGR 357
Query: 644 SGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVL 703
+G++E + ++I + V W +LLG+CKIH+NLE+GE+A K+L+ LE A YVL
Sbjct: 358 AGQLENSLEMIYASSCHEDPV-LWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVL 416
Query: 704 LSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEY 763
+++IYS+A +RK ++ ++ PG SWIE D+VHKF+ D HP+S ++
Sbjct: 417 MTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSE 476
Query: 764 LENLLQRMRKEGYVP-DTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTK 822
L ++ R GY P D++ + D + HSE+LAIA+GL+ T GTT+R+TK
Sbjct: 477 LGEVINRAILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITK 536
Query: 823 NLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
NLRVC DCH TK++SK +REII+RD RFHHF +G CSC DYW
Sbjct: 537 NLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 176/396 (44%), Gaps = 20/396 (5%)
Query: 194 KQVHAYTFRNG---DWRTFTNNALVTMYAKLGRIDEAKALFGLFD-DKDLVSWNTVISSL 249
+++H++ NG F + + G + A+ LF FD D WN +I
Sbjct: 22 RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGF 81
Query: 250 SQNDRFEEALLFLYHMLQSGV-RPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLID 308
S + ++LF ML S V RPD T AL +C ++ + EIHG +R + +D
Sbjct: 82 SNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIR-SGFLD 140
Query: 309 NSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMV 368
++ V ++LV Y + VFD + R + WN MI ++ ++A+ ++ M
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 369 YESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI 428
E +S TL +LL +C A +H E +V NAL+DMY++ G +
Sbjct: 201 NEG-VCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSL 259
Query: 429 EISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPN 488
E + +F M +RD+++WN+MI GY V G +A++ M ++PN
Sbjct: 260 ENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVAS-----------GVRPN 308
Query: 489 SVTLMTVLPGCXXXXXXXXXXEIHAYALKQ-KLATDIAVGSALIDMYAKCGCL-NLSRIV 546
++T + +L GC E Q L ++ ++D+Y + G L N ++
Sbjct: 309 AITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMI 368
Query: 547 FDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMV 582
+ + + W L+ + +H E +++V
Sbjct: 369 YASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLV 404
Score = 120 bits (300), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 135/291 (46%), Gaps = 10/291 (3%)
Query: 35 SPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVP-PDNFAFPAVLKAAAGVNDLNLGKQI 93
S S W +R + SSS L +I Y M+ + V PD F F LK+ + + +I
Sbjct: 70 STSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEI 129
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
HG V + G+ ++ VA SLV Y G + A VFD + RD VSWN MI
Sbjct: 130 HGSVIRSGFLDDAI-VATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGL 188
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWR----TF 209
V S+TLV++ +C+++ L++G +H D R F
Sbjct: 189 HNQALSMYKRMGNEGVCGDSYTLVALLSSCAHV-SALNMGVMLHRIA---CDIRCESCVF 244
Query: 210 TNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSG 269
+NAL+ MYAK G ++ A +F +D+++WN++I + EA+ F M+ SG
Sbjct: 245 VSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASG 304
Query: 270 VRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMY 320
VRP+ +T L CSH +++ G E L N +VD+Y
Sbjct: 305 VRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLY 355
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 236/746 (31%), Positives = 378/746 (50%), Gaps = 25/746 (3%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNL--GK 91
R + W + + F + + + M+ GV PD F+ V+ + GK
Sbjct: 131 RDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGK 190
Query: 92 QIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVS-WNSMIAAACR 150
QIHG + + + S + +L++MY K G A VF I D+ +V WN MI
Sbjct: 191 QIHGFMLRNSLDTDSF-LKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGG 249
Query: 151 FXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWR-TF 209
+V S + ACS + G+Q+H + G +
Sbjct: 250 SGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENS-GFGRQIHCDVVKMGLHNDPY 308
Query: 210 TNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSG 269
+L++MY+K G + EA+ +F DK L WN ++++ ++ND AL M Q
Sbjct: 309 VCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKS 368
Query: 270 VRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKG 329
V PD TL++ + CS L + GK +H L + S + SAL+ +Y C
Sbjct: 369 VLPDSFTLSNVISCCSVLGLYNYGKSVHA-ELFKRPIQSTSTIESALLTLYSKCGCDPDA 427
Query: 330 RWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESD-FTPNSTTLSSLLPACV 388
VF + + + W ++I+G +N EA+K+F +M + D P+S ++S+ AC
Sbjct: 428 YLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACA 487
Query: 389 RCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNT 448
+A +HG ++K G + +V ++L+D+YS+ G E++ +F SM ++V+WN+
Sbjct: 488 GLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNS 547
Query: 449 MITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXX 508
MI+ Y + +++L + M S + P+SV++ +VL
Sbjct: 548 MISCYSRNNLPELSIDLFNLML-----------SQGIFPDSVSITSVLVAISSTASLLKG 596
Query: 509 XEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMH 568
+H Y L+ + +D + +ALIDMY KCG + +F +M +++ITWN++I YG H
Sbjct: 597 KSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSH 656
Query: 569 GKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIE 628
G AL LF M +S P++VT++++ +AC+HSG V+EG N+F MK ++GIE
Sbjct: 657 GDCITALSLFDEMKKAGES-----PDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIE 711
Query: 629 PSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAK 688
P+ +HYA +VDLLGR+G +EEAY IK MP W LL A + H N+E+G ++A+
Sbjct: 712 PNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADS-SIWLCLLSASRTHHNVELGILSAE 770
Query: 689 QLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFL 748
+LL +EP S YV L N+Y AGL ++A + MKE G+ K+PGCSWIE D + F
Sbjct: 771 KLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFF 830
Query: 749 AGDASHPQSKELHEYLENLLQRMRKE 774
+G +S P E+ L L M E
Sbjct: 831 SGGSSSPMKAEIFNVLNRLKSNMVDE 856
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 149/327 (45%), Gaps = 33/327 (10%)
Query: 359 EAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNAL 418
+A+ L+ + S F + T SLL AC + IHG VV G+ D ++ +L
Sbjct: 42 QALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSL 101
Query: 419 MDMYSRMGRIEISKSIF-------GSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQR 471
++MY + G ++ + +F + RD+ WN+MI GY R + + M
Sbjct: 102 VNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRML- 160
Query: 472 GQDDEYEDDESIPLKPNSVTLMTVLP-GCXX-XXXXXXXXEIHAYALKQKLATDIAVGSA 529
++P++ +L V+ C +IH + L+ L TD + +A
Sbjct: 161 ----------VFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTA 210
Query: 530 LIDMYAKCG-CLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSN 588
LIDMY K G ++ R+ + NV+ WNV+I+ +G G E +L+L+ M+A+ +S
Sbjct: 211 LIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY--MLAKNNSV 268
Query: 589 KEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYAC--LVDLLGRSGR 646
K + ++ ACS S G + H G+ +D Y C L+ + + G
Sbjct: 269 KLV---STSFTGALGACSQSENSGFGRQI-HCDVVKMGLH--NDPYVCTSLLSMYSKCGM 322
Query: 647 VEEAYKLIKTMPSNMKKVDAWSSLLGA 673
V EA + + K+++ W++++ A
Sbjct: 323 VGEAETVFSCVVD--KRLEIWNAMVAA 347
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/560 (36%), Positives = 315/560 (56%), Gaps = 47/560 (8%)
Query: 343 VWNAMIAGYARNEFDDE---AIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGI 399
+WN +I N + I +++ M +P+ T LLP+ +
Sbjct: 26 LWNIIIRAIVHNVSSPQRHSPISVYLRM-RNHRVSPDFHTFPFLLPSFHNPLHLPLGQRT 84
Query: 400 HGYVVKRGFEKDKYVQNALMDMYS-------------------------------RMGRI 428
H ++ G +KD +V+ +L++MYS + G I
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 429 EISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPN 488
+ ++ +F M R+++SW+ +I GYV+CG++ +AL+L +MQ + +E ++PN
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAF------VRPN 198
Query: 489 SVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFD 548
T+ TVL C +HAY K + DI +G+ALIDMYAKCG L ++ VF+
Sbjct: 199 EFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFN 258
Query: 549 QMPTR-NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSH 607
+ ++ +V ++ +I M+G +E +LF M ++ I PN VT++ I AC H
Sbjct: 259 ALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMT----TSDNINPNSVTFVGILGACVH 314
Query: 608 SGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAW 667
G+++EG + F M GI PS HY C+VDL GRSG ++EA I +MP V W
Sbjct: 315 RGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPME-PDVLIW 373
Query: 668 SSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEM 727
SLL ++ +++ E A K+L+ L+P + YVLLSN+Y+ G W + IR +M+
Sbjct: 374 GSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVK 433
Query: 728 GVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDV 787
G+ K PGCS++E VH+F+ GD S +S+ ++ L+ ++QR+R+ GYV DT VL D+
Sbjct: 434 GINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDL 493
Query: 788 DDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIIL 847
++++KE L HSE+LAIAF L+ T PGT +R+ KNLR+C DCH+ K ISK+ REI++
Sbjct: 494 NEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVV 553
Query: 848 RDVRRFHHFRNGTCSCGDYW 867
RD RFHHFR+G+CSC D+W
Sbjct: 554 RDCNRFHHFRDGSCSCRDFW 573
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 135/255 (52%), Gaps = 11/255 (4%)
Query: 212 NALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHML----- 266
N++V YAK G ID+A+ LF +++++SW+ +I+ +++EAL M
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 191
Query: 267 QSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKA 326
++ VRP+ T+++ L AC L L GK +H Y + ID +G+AL+DMY C
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEID-IVLGTALIDMYAKCGSL 250
Query: 327 DKGRWVFDGI-LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLP 385
++ + VF+ + ++ V ++AMI A DE +LF EM + PNS T +L
Sbjct: 251 ERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILG 310
Query: 386 ACVRCKAFLDKEGIHGYVVKRGFEKDKYVQN--ALMDMYSRMGRIEISKSIFGSMDRR-D 442
ACV + +++ + ++ F +Q+ ++D+Y R G I+ ++S SM D
Sbjct: 311 ACVH-RGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPD 369
Query: 443 IVSWNTMITGYVVCG 457
++ W ++++G + G
Sbjct: 370 VLIWGSLLSGSRMLG 384
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 156/383 (40%), Gaps = 54/383 (14%)
Query: 242 WNTVISSLSQN----DRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIH 297
WN +I ++ N R ++L M V PD T LP+ + L G+ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYL-RMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 298 GYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFD 357
L L + FV ++L++MY +C + VFD + + WN+++ YA+
Sbjct: 86 AQILL-FGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 358 DEAIKLFIEMVY-----------------------------------ESDFTPNSTTLSS 382
D+A KLF EM E+ PN T+S+
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMST 204
Query: 383 LLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSM-DRR 441
+L AC R A + +H Y+ K E D + AL+DMY++ G +E +K +F ++ ++
Sbjct: 205 VLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK 264
Query: 442 DIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXX 501
D+ +++ MI + G D+ L +M + + PNSVT + +L C
Sbjct: 265 DVKAYSAMICCLAMYGLTDECFQLFSEMTTSDN----------INPNSVTFVGILGACVH 314
Query: 502 XXXXXXXXEIHAYALKQ-KLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR-NVITWN 559
+++ + I ++D+Y + G + + MP +V+ W
Sbjct: 315 RGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWG 374
Query: 560 VLIMAYGMHGKGEEALELFRRMV 582
L+ M G + +R++
Sbjct: 375 SLLSGSRMLGDIKTCEGALKRLI 397
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 132/337 (39%), Gaps = 46/337 (13%)
Query: 56 ISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVN 115
IS Y M V PD FP +L + L LG++ H + FG V SL+N
Sbjct: 47 ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPF-VRTSLLN 105
Query: 116 MYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXN------- 168
MY CGDL A VFD +D +WNS++ A + N
Sbjct: 106 MYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCL 165
Query: 169 -----------------------------VDPTSFTLVSIAHACSNLRDGLSLGKQVHAY 199
V P FT+ ++ AC L L GK VHAY
Sbjct: 166 INGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRL-GALEQGKWVHAY 224
Query: 200 TFR-NGDWRTFTNNALVTMYAKLGRIDEAKALF-GLFDDKDLVSWNTVISSLSQNDRFEE 257
+ + + AL+ MYAK G ++ AK +F L KD+ +++ +I L+ +E
Sbjct: 225 IDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDE 284
Query: 258 ALLFLYHMLQS-GVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSAL 316
M S + P+ VT L AC H ++ GK + + + +
Sbjct: 285 CFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCM 344
Query: 317 VDMYCN---CKKADKGRWVFDGILRRTVAVWNAMIAG 350
VD+Y K+A+ ++ + V +W ++++G
Sbjct: 345 VDLYGRSGLIKEAES--FIASMPMEPDVLIWGSLLSG 379
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/568 (36%), Positives = 320/568 (56%), Gaps = 23/568 (4%)
Query: 309 NSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMV 368
++F + LV Y K+ + R +FD + V W ++I+GY A+ +F +M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 369 YESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI 428
+ PN T +S+ AC + IH + G ++ V ++L+DMY + +
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 429 EISKSIFGSMDR--RDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLK 486
E ++ +F SM R++VSW +MIT Y R +A+ L + +
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSD---------R 233
Query: 487 PNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIV 546
N L +V+ C H + ++ V ++L+DMYAKCG L+ + +
Sbjct: 234 ANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKI 293
Query: 547 FDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACS 606
F ++ +VI++ +IMA HG GE A++LF MVA + I PN VT + + ACS
Sbjct: 294 FLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGR-----INPNYVTLLGVLHACS 348
Query: 607 HSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKK-VD 665
HSG+V+EGL M +G+ P S HY C+VD+LGR GRV+EAY+L KT+ ++
Sbjct: 349 HSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGAL 408
Query: 666 AWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMK 725
W +LL A ++H +E+ A+K+L+ V S Y+ LSN Y+ +G W+ + +R +MK
Sbjct: 409 LWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMK 468
Query: 726 EMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGY------VPD 779
G KE CSWIE++D V+ F AGD S +S E+ +L++L +RM++ G+ +
Sbjct: 469 RSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITT 528
Query: 780 TSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISK 839
+S V DVD+E K+ M+ H ERLA+A+GLL+ P G+TIR+ NLR+C DCH A K IS+
Sbjct: 529 SSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISE 588
Query: 840 IVDREIILRDVRRFHHFRNGTCSCGDYW 867
IV+REI++RDV RFH F+NG+C+C DYW
Sbjct: 589 IVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 199/425 (46%), Gaps = 30/425 (7%)
Query: 208 TFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQ 267
TFT N LV Y KL I+ A+ LF + ++VSW +VIS + + + AL M +
Sbjct: 64 TFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHE 123
Query: 268 S-GVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKA 326
V P+ T AS ACS L R GK IH L + L N V S+LVDMY C
Sbjct: 124 DRPVPPNEYTFASVFKACSALAESRIGKNIHA-RLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 327 DKGRWVFDGIL--RRTVAVWNAMIAGYARNEFDDEAIKLF--IEMVYESDFTPNSTTLSS 382
+ R VFD ++ R V W +MI YA+N EAI+LF SD N L+S
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSD-RANQFMLAS 241
Query: 383 LLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRD 442
++ AC + HG V + G+E + V +L+DMY++ G + ++ IF +
Sbjct: 242 VISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHS 301
Query: 443 IVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXX 502
++S+ +MI G + A+ L +M G+ + PN VTL+ VL C
Sbjct: 302 VISYTSMIMAKAKHGLGEAAVKLFDEMVAGR-----------INPNYVTLLGVLHACSHS 350
Query: 503 XXXXXXXE-IHAYALKQKLATDIAVGSALIDMYAKCGCLN----LSRIVFDQMPTRNVIT 557
E + A K + D + ++DM + G ++ L++ + + + +
Sbjct: 351 GLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTI-EVGAEQGALL 409
Query: 558 WNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNL 617
W L+ A +HG+ E E +R++ SN+++ YIA+ A + SG ++ +L
Sbjct: 410 WGALLSAGRLHGRVEIVSEASKRLI---QSNQQVTS---AYIALSNAYAVSGGWEDSESL 463
Query: 618 FHTMK 622
MK
Sbjct: 464 RLEMK 468
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 157/334 (47%), Gaps = 25/334 (7%)
Query: 399 IHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGR 458
+H +K GF D + N L+ Y ++ I ++ +F M ++VSW ++I+GY G+
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 459 HDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQ 518
+AL++ M E P+ PN T +V C IHA
Sbjct: 111 PQNALSMFQKMH----------EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEIS 160
Query: 519 KLATDIAVGSALIDMYAKCGCLNLSRIVFDQMP--TRNVITWNVLIMAYGMHGKGEEALE 576
L +I V S+L+DMY KC + +R VFD M RNV++W +I AY + +G EA+E
Sbjct: 161 GLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIE 220
Query: 577 LFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYAC 636
LFR A S+ R N+ ++ +ACS G + G + H + G E ++
Sbjct: 221 LFRSFNAALTSD---RANQFMLASVISACSSLGRLQWG-KVAHGLVTRGGYESNTVVATS 276
Query: 637 LVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQL-LVLEP 695
L+D+ + G + A K+ + + V +++S++ A H +GE A K ++
Sbjct: 277 LLDMYAKCGSLSCAEKIFLRIRCH--SVISYTSMIMAKAKHG---LGEAAVKLFDEMVAG 331
Query: 696 NVASHYVLLSNIY---SSAGLWDQAMDIRKKMKE 726
+ +YV L + S +GL ++ ++ M E
Sbjct: 332 RINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAE 365
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 177/379 (46%), Gaps = 20/379 (5%)
Query: 93 IHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFX 152
+H K G+AS + V N LV Y K ++ A +FD + + + VSW S+I+
Sbjct: 51 LHTLTLKLGFASDTFTV-NHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMG 109
Query: 153 XXXXXXXXXXXXXXXN-VDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTF-T 210
V P +T S+ ACS L + +GK +HA +G R
Sbjct: 110 KPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAES-RIGKNIHARLEISGLRRNIVV 168
Query: 211 NNALVTMYAKLGRIDEAKALFG--LFDDKDLVSWNTVISSLSQNDRFEEALLFL--YHML 266
+++LV MY K ++ A+ +F + +++VSW ++I++ +QN R EA+ ++
Sbjct: 169 SSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAA 228
Query: 267 QSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKA 326
+ R + LAS + ACS L L+ GK HG R N+ V ++L+DMY C
Sbjct: 229 LTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRG-GYESNTVVATSLLDMYAKCGSL 287
Query: 327 DKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPA 386
+F I +V + +MI A++ + A+KLF EMV PN TL +L A
Sbjct: 288 SCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMV-AGRINPNYVTLLGVLHA 346
Query: 387 CVRCKAFLDKEGIHGYVV---KRGFEKDKYVQNALMDMYSRMGRI----EISKSIFGSMD 439
C + L EG+ + K G D ++DM R GR+ E++K+I +
Sbjct: 347 C--SHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAE 404
Query: 440 RRDIVSWNTMITGYVVCGR 458
+ ++ W +++ + GR
Sbjct: 405 QGALL-WGALLSAGRLHGR 422
Score = 109 bits (273), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 144/314 (45%), Gaps = 19/314 (6%)
Query: 67 VPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGA 126
VPP+ + F +V KA + + + +GK IH + G ++ V++SLV+MYGKC D+ A
Sbjct: 127 VPPNEYTFASVFKACSALAESRIGKNIHARLEISGL-RRNIVVSSSLVDMYGKCNDVETA 185
Query: 127 HHVFDRI--SDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS-----FTLVSI 179
VFD + R+ VSW SMI A + N TS F L S+
Sbjct: 186 RRVFDSMIGYGRNVVSWTSMITA---YAQNARGHEAIELFRSFNAALTSDRANQFMLASV 242
Query: 180 AHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKD 238
ACS+L L GK H R G + T +L+ MYAK G + A+ +F
Sbjct: 243 ISACSSL-GRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHS 301
Query: 239 LVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHG 298
++S+ ++I + +++ E A+ M+ + P+ VTL L ACSH ++ G E
Sbjct: 302 VISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLS 361
Query: 299 YALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI---LRRTVAVWNAMIAG---YA 352
++ +S + +VDM + D+ + I + +W A+++ +
Sbjct: 362 LMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHG 421
Query: 353 RNEFDDEAIKLFIE 366
R E EA K I+
Sbjct: 422 RVEIVSEASKRLIQ 435
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/587 (36%), Positives = 324/587 (55%), Gaps = 36/587 (6%)
Query: 294 KEIHGYALRNTDLIDNSFVGSALV----------DMYCNCKKADKGRWVFDGILRRTVAV 343
++IH LR T LI NS V + D+ +C+ VF L T++
Sbjct: 28 RQIHALLLR-TSLIRNSDVFHHFLSRLALSLIPRDINYSCR-------VFSQRLNPTLSH 79
Query: 344 WNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYV 403
N MI ++ ++ E +LF + S N + S L C++ L IHG +
Sbjct: 80 CNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKI 139
Query: 404 VKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDAL 463
GF D + LMD+YS + +F + +RD VSWN + + Y+ R D L
Sbjct: 140 FSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVL 199
Query: 464 NLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATD 523
L D+ ++D +KP+ VT + L C ++H + + L+
Sbjct: 200 VLF--------DKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGA 251
Query: 524 IAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVA 583
+ + + L+ MY++CG ++ + VF M RNV++W LI M+G G+EA+E F M+
Sbjct: 252 LNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEML- 310
Query: 584 EKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANH-GIEPSSDHYACLVDLLG 642
I P E T + +ACSHSG+V EG+ F M++ I+P+ HY C+VDLLG
Sbjct: 311 ----KFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLG 366
Query: 643 RSGRVEEAYKLIKTMPSNMKKVDA-WSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHY 701
R+ +++AY LIK+M MK W +LLGAC++H ++E+GE L+ L+ A Y
Sbjct: 367 RARLLDKAYSLIKSM--EMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDY 424
Query: 702 VLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELH 761
VLL N YS+ G W++ ++R MKE + +PGCS IE + VH+F+ D SHP+ +E++
Sbjct: 425 VLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIY 484
Query: 762 EYLENLLQRMRKEGYVPDTSCVLHDVD-DEEKETMLCGHSERLAIAFGLLNTPPGTTIRV 820
+ L + Q+++ GYV + + LH+++ +EEK L HSE+LAIAFG+L TPPGTTIRV
Sbjct: 485 KMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRV 544
Query: 821 TKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
TKNLR C DCH KF+S + DR +I+RD RFHHF+ G+CSC D+W
Sbjct: 545 TKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 113/235 (48%), Gaps = 10/235 (4%)
Query: 65 AGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLA 124
+ +P + + LK DL G QIHG +F G+ S S+ + +L+++Y C +
Sbjct: 107 SSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSL-LMTTLMDLYSTCENST 165
Query: 125 GAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXN-----VDPTSFTLVSI 179
A VFD I RD VSWN + + C N V P T +
Sbjct: 166 DACKVFDEIPKRDTVSWNVLFS--CYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLA 223
Query: 180 AHACSNLRDGLSLGKQVHAYTFRNGDWRTFT-NNALVTMYAKLGRIDEAKALFGLFDDKD 238
AC+NL L GKQVH + NG +N LV+MY++ G +D+A +F +++
Sbjct: 224 LQACANL-GALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERN 282
Query: 239 LVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTG 293
+VSW +IS L+ N +EA+ ML+ G+ P+ TL L ACSH ++ G
Sbjct: 283 VVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEG 337
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 135/300 (45%), Gaps = 28/300 (9%)
Query: 178 SIAHACSNLRDGLSLGKQVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDEAKALFGLFDD 236
S A C L G Q+H F +G + L+ +Y+ +A +F
Sbjct: 117 SFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPK 176
Query: 237 KDLVSWNTVISSLSQNDRFEEALLFLYHM---LQSGVRPDGVTLASALPACSHLEMLRTG 293
+D VSWN + S +N R + L+ M + V+PDGVT AL AC++L L G
Sbjct: 177 RDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFG 236
Query: 294 KEIHGYALRNTDLIDNSFVGSA------LVDMYCNCKKADKGRWVFDGILRRTVAVWNAM 347
K++H D ID + + A LV MY C DK VF G+ R V W A+
Sbjct: 237 KQVH-------DFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTAL 289
Query: 348 IAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRG 407
I+G A N F EAI+ F EM+ + +P TL+ LL AC + L EG+ + R
Sbjct: 290 ISGLAMNGFGKEAIEAFNEML-KFGISPEEQTLTGLLSACSH--SGLVAEGMMFFDRMRS 346
Query: 408 FE----KDKYVQNALMDMYSRMGRIEISKSIFGSMDRR-DIVSWNTMITGYVVCGRHDDA 462
E + + ++D+ R ++ + S+ SM+ + D W T++ C H D
Sbjct: 347 GEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGA---CRVHGDV 403
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 8/212 (3%)
Query: 61 NMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKC 120
N V V PD L+A A + L+ GKQ+H + + G S ++ ++N+LV+MY +C
Sbjct: 207 NDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGL-SGALNLSNTLVSMYSRC 265
Query: 121 GDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIA 180
G + A+ VF + +R+ VSW ++I+ + P TL +
Sbjct: 266 GSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLL 325
Query: 181 HACSNLRDGLSLGKQVHAYTFRNGDWRTFTN----NALVTMYAKLGRIDEAKALFGLFDD 236
ACS+ GL + R+G+++ N +V + + +D+A +L +
Sbjct: 326 SACSH--SGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEM 383
Query: 237 K-DLVSWNTVISSLSQNDRFEEALLFLYHMLQ 267
K D W T++ + + E + H+++
Sbjct: 384 KPDSTIWRTLLGACRVHGDVELGERVISHLIE 415
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/654 (30%), Positives = 368/654 (56%), Gaps = 28/654 (4%)
Query: 223 RIDEAKALFGLFDDKDL----VSWNTVISSLSQNDRFEEAL-LFLYHMLQSGVRPDGVTL 277
RI+ ++ + DD + V+ + I L +RF EA LF ++ + T
Sbjct: 67 RIEVKESKDQILDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTY 126
Query: 278 ASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGIL 337
+ + AC L+ +R K ++G+ + N ++ + ++ M+ C R +FD I
Sbjct: 127 DALVEACIRLKSIRCVKRVYGFMMSN-GFEPEQYMMNRILLMHVKCGMIIDARRLFDEIP 185
Query: 338 RRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKE 397
R + + ++I+G+ EA +LF +M++E + T + +L A + +
Sbjct: 186 ERNLYSYYSIISGFVNFGNYVEAFELF-KMMWEELSDCETHTFAVMLRASAGLGSIYVGK 244
Query: 398 GIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCG 457
+H +K G + +V L+DMYS+ G IE ++ F M + V+WN +I GY + G
Sbjct: 245 QLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHG 304
Query: 458 RHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALK 517
++AL LL+DM+ D + + ++++M + + HA ++
Sbjct: 305 YSEEALCLLYDMR---------DSGVSIDQFTLSIMIRIS--TKLAKLELTKQAHASLIR 353
Query: 518 QKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALEL 577
++I +AL+D Y+K G ++ +R VFD++P +N+I+WN L+ Y HG+G +A++L
Sbjct: 354 NGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKL 413
Query: 578 FRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACL 637
F +M+A + PN VT++A+ +AC++SG+ ++G +F +M HGI+P + HYAC+
Sbjct: 414 FEKMIA-----ANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACM 468
Query: 638 VDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNV 697
++LLGR G ++EA I+ P V+ W++LL AC++ +NLE+G + A++L + P
Sbjct: 469 IELLGRDGLLDEAIAFIRRAPLK-TTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEK 527
Query: 698 ASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDA----S 753
+YV++ N+Y+S G +A + + ++ G+ P C+W+E D+ H FL+GD +
Sbjct: 528 LGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYN 587
Query: 754 HPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTP 813
+++++ ++ L++ + + GY + +L DVD++E+E + HSE+LAIA+GL+NTP
Sbjct: 588 ETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTP 647
Query: 814 PGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
+++T+N R+C +CH +FIS + RE+++RD RFHHF+ G CSCG YW
Sbjct: 648 EWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 164/340 (48%), Gaps = 18/340 (5%)
Query: 73 AFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDR 132
+ A+++A + + K+++G + G+ + N ++ M+ KCG + A +FD
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMM-NRILLMHVKCGMIIDARRLFDE 183
Query: 133 ISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSL 192
I +R+ S+ S+I+ F D + T + A + L + +
Sbjct: 184 IPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGL-GSIYV 242
Query: 193 GKQVHAYTFRNGDW-RTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQ 251
GKQ+H + G TF + L+ MY+K G I++A+ F +K V+WN VI+ +
Sbjct: 243 GKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYAL 302
Query: 252 NDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRN---TDLID 308
+ EEAL LY M SGV D TL+ + + L L K+ H +RN ++++
Sbjct: 303 HGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVA 362
Query: 309 NSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMV 368
N +ALVD Y + D R+VFD + R+ + WNA++ GYA + +A+KLF +M+
Sbjct: 363 N----TALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMI 418
Query: 369 YESDFTPNSTTLSSLLPACVRC-------KAFLDKEGIHG 401
++ PN T ++L AC + FL +HG
Sbjct: 419 -AANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHG 457
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 118/247 (47%), Gaps = 3/247 (1%)
Query: 51 SFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVA 110
++++A + M + F +L+A+AG+ + +GKQ+H K G + V+
Sbjct: 204 NYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTF-VS 262
Query: 111 NSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD 170
L++MY KCGD+ A F+ + ++ V+WN++IA V
Sbjct: 263 CGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVS 322
Query: 171 PTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKA 229
FTL SI S L L KQ HA RNG + N ALV Y+K GR+D A+
Sbjct: 323 IDQFTL-SIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARY 381
Query: 230 LFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEM 289
+F K+++SWN ++ + + R +A+ M+ + V P+ VT + L AC++ +
Sbjct: 382 VFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGL 441
Query: 290 LRTGKEI 296
G EI
Sbjct: 442 SEQGWEI 448
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 225/676 (33%), Positives = 367/676 (54%), Gaps = 35/676 (5%)
Query: 69 PDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHH 128
PD++ + +VL A A + L GK + V K G + V V ++V++Y KCG +A A
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVIKCG--AEDVFVCTAIVDLYAKCGHMAEAME 306
Query: 129 VFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRD 188
VF RI + VSW M++ + V+ + T+ S+ AC
Sbjct: 307 VFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGR-PS 365
Query: 189 GLSLGKQVHAYTFRNGDW-RTFTNNALVTMYAKLGRIDEAKALFGLFDD---KDLVSWNT 244
+ QVHA+ F++G + + AL++MY+K G ID ++ +F DD +++V N
Sbjct: 366 MVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NV 423
Query: 245 VISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNT 304
+I+S SQ+ + +A+ MLQ G+R D ++ S L S L+ L GK++HGY L++
Sbjct: 424 MITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSG 480
Query: 305 DLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLF 364
++D + VGS+L +Y C ++ +F GI + A W +MI+G+ + EAI LF
Sbjct: 481 LVLDLT-VGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLF 539
Query: 365 IEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSR 424
EM+ + +P+ +TL+++L C + + IHGY ++ G +K + +AL++MYS+
Sbjct: 540 SEML-DDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSK 598
Query: 425 MGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIP 484
G +++++ ++ + D VS +++I+GY G D L DM
Sbjct: 599 CGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSG----------- 647
Query: 485 LKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSR 544
+S + ++L ++HAY K L T+ +VGS+L+ MY+K G ++
Sbjct: 648 FTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCC 707
Query: 545 IVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAA 604
F Q+ ++I W LI +Y HGK EAL+++ M K +P++VT++ + +A
Sbjct: 708 KAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLM-----KEKGFKPDKVTFVGVLSA 762
Query: 605 CSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKV 664
CSH G+V+E ++M ++GIEP + HY C+VD LGRSGR+ EA I M K
Sbjct: 763 CSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNM---HIKP 819
Query: 665 DA--WSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRK 722
DA W +LL ACKIH +E+G++AAK+ + LEP+ A Y+ LSNI + G WD+ + RK
Sbjct: 820 DALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRK 879
Query: 723 KMKEMGVRKEPGCSWI 738
MK GV+KEPG S +
Sbjct: 880 LMKGTGVQKEPGWSSV 895
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 173/661 (26%), Positives = 301/661 (45%), Gaps = 49/661 (7%)
Query: 86 DLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMI 145
+L K + H+ + V + SL++ Y G +A A +FD I D VS N MI
Sbjct: 63 NLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMI 122
Query: 146 AAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGD 205
+ + + + S+ ACS L+ L + V +T + G
Sbjct: 123 SGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPL-FSELVCCHTIKMGY 181
Query: 206 W-RTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYH 264
+ +AL+ +++K R ++A +F ++ WNT+I+ +N + +
Sbjct: 182 FFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHE 241
Query: 265 MLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCK 324
M +PD T +S L AC+ LE LR GK + ++ ++ FV +A+VD+Y C
Sbjct: 242 MCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG--AEDVFVCTAIVDLYAKCG 299
Query: 325 KADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLL 384
+ VF I +V W M++GY ++ A+++F EM + S N+ T++S++
Sbjct: 300 HMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRH-SGVEINNCTVTSVI 358
Query: 385 PACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD---RR 441
AC R + +H +V K GF D V AL+ MYS+ G I++S+ +F +D R+
Sbjct: 359 SACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQ 418
Query: 442 DIVSWNTMITGYVVCGRHDDALNLLHDM-QRG-QDDEYEDDESIPLKPNSVTLMTVLPGC 499
+IV N MIT + + A+ L M Q G + DE+ + +L++VL
Sbjct: 419 NIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEF----------SVCSLLSVL--- 463
Query: 500 XXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWN 559
++H Y LK L D+ VGS+L +Y+KCG L S +F +P ++ W
Sbjct: 464 ---DCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWA 520
Query: 560 VLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFH 619
+I + +G EA+ LF M+ + S P+E T A+ CS + G + H
Sbjct: 521 SMISGFNEYGYLREAIGLFSEMLDDGTS-----PDESTLAAVLTVCSSHPSLPRGKEI-H 574
Query: 620 TMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQN 679
GI+ D + LV++ + G ++ A ++ +P + V SSL+ H
Sbjct: 575 GYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-ELDPVSC-SSLISGYSQHGL 632
Query: 680 LEVGEIAAKQLLVLEPNVASHYVL----LSNIYSSAGLWDQA---MDIRKKMKEMGVRKE 732
++ G L+ V S + + +S+I +A L D++ + + ++G+ E
Sbjct: 633 IQDG------FLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTE 686
Query: 733 P 733
P
Sbjct: 687 P 687
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 175/643 (27%), Positives = 284/643 (44%), Gaps = 75/643 (11%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W L +S+ A+ + M +GV +N +V+ A + + Q+H V
Sbjct: 318 SWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWV 377
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISD--RDHVSWNSMIAAACRFXXXX 155
FK G+ S +VA +L++MY K GD+ + VF+ + D R ++ N MI + +
Sbjct: 378 FKSGFYLDS-SVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPG 435
Query: 156 XXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFT-NNAL 214
+ F++ S+ ++ D L+LGKQVH YT ++G T ++L
Sbjct: 436 KAIRLFTRMLQEGLRTDEFSVCSLL----SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSL 491
Query: 215 VTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDG 274
T+Y+K G ++E+ LF KD W ++IS ++ EA+ ML G PD
Sbjct: 492 FTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDE 551
Query: 275 VTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSF-VGSALVDMYCNCKKADKGRWVF 333
TLA+ L CS L GKEIHGY LR ID +GSALV+MY C R V+
Sbjct: 552 STLAAVLTVCSSHPSLPRGKEIHGYTLRAG--IDKGMDLGSALVNMYSKCGSLKLARQVY 609
Query: 334 DGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAF 393
D + +++I+GY+++ + LF +MV S FT +S +SS+L A
Sbjct: 610 DRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVM-SGFTMDSFAISSILKAAALSDES 668
Query: 394 LDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGY 453
+H Y+ K G + V ++L+ MYS+ G I+ F ++ D+++W +I Y
Sbjct: 669 SLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASY 728
Query: 454 VVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHA 513
G+ ++AL + + M+ KP+ VT + VL C
Sbjct: 729 AQHGKANEALQVYNLMKEKG-----------FKPDKVTFVGVLSACSH------------ 765
Query: 514 YALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEE 573
G + + Y +L+ +V D + ++ A G G+ E
Sbjct: 766 -------------GGLVEESY-----FHLNSMVKDYGIEPENRHYVCMVDALGRSGRLRE 807
Query: 574 ALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGI--EPS- 630
A M I+P+ + + + AAC G V+ G + A I EPS
Sbjct: 808 AESFINNM--------HIKPDALVWGTLLAACKIHGEVELG-----KVAAKKAIELEPSD 854
Query: 631 SDHYACLVDLLGRSG---RVEEAYKLIKTMPSNMKKVDAWSSL 670
+ Y L ++L G VEE KL+K + ++K WSS+
Sbjct: 855 AGAYISLSNILAEVGEWDEVEETRKLMKG--TGVQKEPGWSSV 895
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 176/373 (47%), Gaps = 19/373 (5%)
Query: 285 SHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVW 344
S L LRT K + + LR L + F+ +L+ Y N +FD I + V
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSC 118
Query: 345 NAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVV 404
N MI+GY ++ +E+++ F +M + F N + S++ AC +A L E + + +
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLG-FEANEISYGSVISACSALQAPLFSELVCCHTI 177
Query: 405 KRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALN 464
K G+ + V++AL+D++S+ R E + +F ++ WNT+I G + + +
Sbjct: 178 KMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFD 237
Query: 465 LLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDI 524
L H+M G KP+S T +VL C + A +K A D+
Sbjct: 238 LFHEMCVGFQ-----------KPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDV 285
Query: 525 AVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAE 584
V +A++D+YAKCG + + VF ++P +V++W V++ Y ALE+F+ M
Sbjct: 286 FVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEM--- 342
Query: 585 KDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRS 644
+ S EI N T ++ +AC MV E + H G S A L+ + +S
Sbjct: 343 RHSGVEI--NNCTVTSVISACGRPSMVCEASQV-HAWVFKSGFYLDSSVAAALISMYSKS 399
Query: 645 GRVEEAYKLIKTM 657
G ++ + ++ + +
Sbjct: 400 GDIDLSEQVFEDL 412
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 229/698 (32%), Positives = 361/698 (51%), Gaps = 70/698 (10%)
Query: 177 VSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDE---AKALFG 232
+S+ ++C NLR L+ Q+H + G D ++ L+ ++ + D A+ L
Sbjct: 9 LSLLNSCKNLR-ALT---QIHGLFIKYGVDTDSYFTGKLI-LHCAISISDALPYARRLLL 63
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSG-VRPDGVTLASALPACSHLEMLR 291
F + D +NT++ S++D ++ M++ G V PD + A + A + LR
Sbjct: 64 CFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLR 123
Query: 292 TGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGY 351
TG ++H AL++ L + FVG+ L+ MY C + R VFD + + + WNA+I
Sbjct: 124 TGFQMHCQALKH-GLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITAC 182
Query: 352 ARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKD 411
R A ++F +M+ N T+
Sbjct: 183 FRGNDVAGAREIFDKMLVR-----NHTSW------------------------------- 206
Query: 412 KYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQR 471
N ++ Y + G +E +K IF M RD VSW+TMI G G +++ ++QR
Sbjct: 207 ----NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQR 262
Query: 472 GQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALI 531
+ PN V+L VL C +H + K + ++V +ALI
Sbjct: 263 AG-----------MSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALI 311
Query: 532 DMYAKCGCLNLSRIVFDQM-PTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKE 590
DMY++CG + ++R+VF+ M R +++W +I MHG+GEEA+ LF M A
Sbjct: 312 DMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG----- 366
Query: 591 IRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEA 650
+ P+ +++I++ ACSH+G+++EG + F MK + IEP +HY C+VDL GRSG++++A
Sbjct: 367 VTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKA 426
Query: 651 YKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSS 710
Y I MP + W +LLGAC H N+E+ E ++L L+PN + VLLSN Y++
Sbjct: 427 YDFICQMPIPPTAI-VWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYAT 485
Query: 711 AGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQR 770
AG W IRK M ++K S +E ++KF AG+ E HE L+ ++ R
Sbjct: 486 AGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILR 545
Query: 771 MRKE-GYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCND 829
++ E GY P+ + L+DV++EEKE + HSE+LA+AF L G IR+ KNLR+C D
Sbjct: 546 LKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRD 605
Query: 830 CHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
CH K SK+ EI++RD RFH F++G+CSC DYW
Sbjct: 606 CHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 148/374 (39%), Gaps = 68/374 (18%)
Query: 43 LRLQAQSSSFLQAISTYANMVAAG-VPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFG 101
+R ++S +++ + M+ G V PD+F+F V+KA L G Q+H K G
Sbjct: 77 VRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHG 136
Query: 102 YASTSVAVANSLVNMYGKCG-------------------------------DLAGAHHVF 130
S + V +L+ MYG CG D+AGA +F
Sbjct: 137 LES-HLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIF 195
Query: 131 DRISDRDH-------------------------------VSWNSMIAAACRFXXXXXXXX 159
D++ R+H VSW++MI
Sbjct: 196 DKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFL 255
Query: 160 XXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMY 218
+ P +L + ACS GK +H + + G W NNAL+ MY
Sbjct: 256 YFRELQRAGMSPNEVSLTGVLSACSQ-SGSFEFGKILHGFVEKAGYSWIVSVNNALIDMY 314
Query: 219 AKLGRIDEAKALF-GLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTL 277
++ G + A+ +F G+ + + +VSW ++I+ L+ + + EEA+ M GV PDG++
Sbjct: 315 SRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISF 374
Query: 278 ASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGR-WVFDGI 336
S L ACSH ++ G++ R + +VD+Y K K ++
Sbjct: 375 ISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMP 434
Query: 337 LRRTVAVWNAMIAG 350
+ T VW ++
Sbjct: 435 IPPTAIVWRTLLGA 448
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 2/153 (1%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R +W + A + SF ++ + + AG+ P+ + VL A + GK +
Sbjct: 232 RDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKIL 291
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISD-RDHVSWNSMIAAACRFX 152
HG V K GY S V+V N+L++MY +CG++ A VF+ + + R VSW SMIA
Sbjct: 292 HGFVEKAGY-SWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHG 350
Query: 153 XXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSN 185
V P + +S+ HACS+
Sbjct: 351 QGEEAVRLFNEMTAYGVTPDGISFISLLHACSH 383
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 231/745 (31%), Positives = 392/745 (52%), Gaps = 62/745 (8%)
Query: 44 RLQAQSSSFLQA---------ISTYANMVAAGVP-PDNFAFPAVLKAAAGVNDLNLGKQI 93
+LQA SS QA +S Y+ + AGV D F FP V KA A ++ L G
Sbjct: 8 KLQALSSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQG--- 64
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
NS+ + Y KCGDL FD ++ RD VSWN ++ +
Sbjct: 65 -----------------NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGF 107
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWR-TFTNN 212
+P + TLV + HAC +L G+++H Y R+G + N
Sbjct: 108 EEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWFD---GEKIHGYVIRSGFCGISSVQN 164
Query: 213 ALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHML-QSGVR 271
+++ MYA + A+ LF ++D++SW+ VI S Q+ L M+ ++
Sbjct: 165 SILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTE 223
Query: 272 PDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRW 331
PD VT+ S L AC+ +E + G+ +HG+++R + + FV ++L+DMY D
Sbjct: 224 PDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFR 283
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCK 391
VFD R + WN+++AG+ N+ DEA+++F MV E+ + T+ SLL C +
Sbjct: 284 VFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEA-VEVDEVTVVSLLRVCKFFE 342
Query: 392 AFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMIT 451
L + IHG +++RG+E ++ ++L+D Y+ ++ + ++ SM +D+VS +TMI+
Sbjct: 343 QPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMIS 402
Query: 452 GYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEI 511
G GR D+A+++ M+ PN++T++++L C
Sbjct: 403 GLAHAGRSDEAISIFCHMRD--------------TPNAITVISLLNACSVSADLRTSKWA 448
Query: 512 HAYALKQKLA-TDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGK 570
H A+++ LA DI+VG++++D YAKCG + ++R FDQ+ +N+I+W V+I AY ++G
Sbjct: 449 HGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGL 508
Query: 571 GEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTM-KANHGIEP 629
++AL LF M K PN VTY+A +AC+H G+V +GL +F +M + +H +P
Sbjct: 509 PDKALALFDEM-----KQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH--KP 561
Query: 630 SSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKK-VDAWSSLLGACKIH-QNLEVGEIAA 687
S HY+C+VD+L R+G ++ A +LIK +P ++K AW ++L C+ + L +
Sbjct: 562 SLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVV 621
Query: 688 KQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKF 747
++L LEP +S Y+L S+ +++ W+ +R+ +KE VR G S + + +F
Sbjct: 622 AEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRF 681
Query: 748 LAGDASHPQSKELHEYLENLLQRMR 772
LAGD EL++ +++L + M+
Sbjct: 682 LAGDKLSQSDSELNDVVQSLHRCMK 706
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/704 (31%), Positives = 367/704 (52%), Gaps = 28/704 (3%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
Q +ST+++M+A + PD F FP++LKA A + L+ G IH V G+ S+ +++SL
Sbjct: 29 QVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGF-SSDFYISSSL 87
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
VN+Y K G LA A VF+ + +RD V W +MI R + P
Sbjct: 88 VNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGP 147
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGL 233
TL+ + + L Y F D N+++ +Y K + +AK LF
Sbjct: 148 VTLLEMLSGVLEITQLQCLHDFAVIYGF---DCDIAVMNSMLNLYCKCDHVGDAKDLFDQ 204
Query: 234 FDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTG 293
+ +D+VSWNT+IS + E L LY M G+RPD T ++L + L G
Sbjct: 205 MEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMG 264
Query: 294 KEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYAR 353
+ +H ++ +D + +AL+ MY C K + V + I + V W MI+G R
Sbjct: 265 RMLHCQIVKTGFDVDMH-LKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMR 323
Query: 354 NEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKY 413
++A+ +F EM+ +S +S ++S++ +C + +F +HGYV++ G+ D
Sbjct: 324 LGRAEKALIVFSEML-QSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTP 382
Query: 414 VQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQ 473
N+L+ MY++ G ++ S IF M+ RD+VSWN +I+GY AL L +M+
Sbjct: 383 ALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMK--- 439
Query: 474 DDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDM 533
++ + + +S T++++L C IH ++ + V +AL+DM
Sbjct: 440 ---FKTVQQV----DSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDM 492
Query: 534 YAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRP 593
Y+KCG L ++ FD + ++V++W +LI YG HGKG+ ALE++ + + + P
Sbjct: 493 YSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFL-----HSGMEP 547
Query: 594 NEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKL 653
N V ++A+ ++CSH+GMV +GL +F +M + G+EP+ +H AC+VDLL R+ R+E+A+K
Sbjct: 548 NHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKF 607
Query: 654 IK---TMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSS 710
K T PS +D +L AC+ + EV +I + ++ L+P A HYV L + +++
Sbjct: 608 YKENFTRPS----IDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAA 663
Query: 711 AGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASH 754
WD + +M+ +G++K PG S IE + F SH
Sbjct: 664 MKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH 707
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 211/453 (46%), Gaps = 30/453 (6%)
Query: 242 WNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYAL 301
+N+ I+ LS + ++ L ML + + PD T S L AC+ L+ L G IH L
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 302 RNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAI 361
N + ++ S+LV++Y R VF+ + R V W AMI Y+R EA
Sbjct: 74 VN-GFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 362 KLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDM 421
L EM ++ P TL +L + + +H + V GF+ D V N+++++
Sbjct: 133 SLVNEMRFQG-IKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNL 188
Query: 422 YSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDE 481
Y + + +K +F M++RD+VSWNTMI+GY G + L LL+ M RG
Sbjct: 189 YCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRM-RGDG------- 240
Query: 482 SIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLN 541
L+P+ T L +H +K D+ + +ALI MY KCG
Sbjct: 241 ---LRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEE 297
Query: 542 LSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAI 601
S V + +P ++V+ W V+I G+ E+AL +F M+ S ++ + ++
Sbjct: 298 ASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEML---QSGSDLSSEAIA--SV 352
Query: 602 FAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNM 661
A+C+ G D G ++ H HG + L+ + + G ++++ + + M N
Sbjct: 353 VASCAQLGSFDLGASV-HGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERM--NE 409
Query: 662 KKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLE 694
+ + +W++++ QN+++ K LL+ E
Sbjct: 410 RDLVSWNAIISG--YAQNVDL----CKALLLFE 436
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/578 (35%), Positives = 334/578 (57%), Gaps = 26/578 (4%)
Query: 293 GKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYA 352
G ++HGY ++ + L V + L++ Y + R F+ +++ W+++I+ +A
Sbjct: 34 GLQLHGYVVK-SGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFA 92
Query: 353 RNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACV---RCKAFLDKEGIHGYVVKRGFE 409
+NE +++ F++ + + P+ L S +C RC +H +K G++
Sbjct: 93 QNELPWMSLE-FLKKMMAGNLRPDDHVLPSATKSCAILSRCDI---GRSVHCLSMKTGYD 148
Query: 410 KDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDM 469
D +V ++L+DMY++ G I ++ +F M +R++V+W+ M+ GY G +++AL L
Sbjct: 149 ADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLF--- 205
Query: 470 QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSA 529
++ +E+ L N + +V+ C +IH ++K + VGS+
Sbjct: 206 ---KEALFEN-----LAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSS 257
Query: 530 LIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNK 589
L+ +Y+KCG + VF+++P +N+ WN ++ AY H ++ +ELF+RM
Sbjct: 258 LVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSG---- 313
Query: 590 EIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEE 649
++PN +T++ + ACSH+G+VDEG F MK + IEP+ HYA LVD+LGR+GR++E
Sbjct: 314 -MKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQE 371
Query: 650 AYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYS 709
A ++I MP + + W +LL +C +H+N E+ AA ++ L P + ++ LSN Y+
Sbjct: 372 ALEVITNMPIDPTE-SVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYA 430
Query: 710 SAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQ 769
+ G ++ A RK +++ G +KE G SW+E R++VH F AG+ H +SKE++E L L +
Sbjct: 431 ADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGE 490
Query: 770 RMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCND 829
M K GY+ DTS VL +VD +EK + HSERLAIAFGL+ P IRV KNLRVC D
Sbjct: 491 EMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGD 550
Query: 830 CHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
CH A KF+S R II+RD RFH F +G CSC DYW
Sbjct: 551 CHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 176/365 (48%), Gaps = 26/365 (7%)
Query: 373 FTP--NSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEI 430
F P N + LL + R ++ + +HGYVVK G V N L++ YS+
Sbjct: 9 FVPCHNYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFD 68
Query: 431 SKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSV 490
S+ F ++ +W+++I+ + +L L M G L+P+
Sbjct: 69 SRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGN-----------LRPDDH 117
Query: 491 TLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQM 550
L + C +H ++K D+ VGS+L+DMYAKCG + +R +FD+M
Sbjct: 118 VLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEM 177
Query: 551 PTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGM 610
P RNV+TW+ ++ Y G+ EEAL LF+ + E + N+ ++ ++ + C++S +
Sbjct: 178 PQRNVVTWSGMMYGYAQMGENEEALWLFKEALFEN-----LAVNDYSFSSVISVCANSTL 232
Query: 611 VDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSL 670
++ G + H + + SS + LV L + G E AY++ +P +K + W+++
Sbjct: 233 LELGRQI-HGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVP--VKNLGIWNAM 289
Query: 671 LGACKIHQNLE-VGEIAAK-QLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMG 728
L A H + + V E+ + +L ++PN + +L N S AGL D+ +MKE
Sbjct: 290 LKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVL-NACSHAGLVDEGRYYFDQMKE-- 346
Query: 729 VRKEP 733
R EP
Sbjct: 347 SRIEP 351
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 185/400 (46%), Gaps = 11/400 (2%)
Query: 61 NMVAAGVPPDNF-AFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGK 119
N A VP N+ +L ++A G Q+HG+V K G + + VAN+L+N Y K
Sbjct: 4 NSSAFFVPCHNYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPL-VANNLINFYSK 62
Query: 120 CGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSI 179
+ F+ + +W+S+I+ + N+ P L S
Sbjct: 63 SQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSA 122
Query: 180 AHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKD 238
+C+ L +G+ VH + + G D F ++LV MYAK G I A+ +F ++
Sbjct: 123 TKSCAIL-SRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRN 181
Query: 239 LVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHG 298
+V+W+ ++ +Q EEAL L + + + +S + C++ +L G++IHG
Sbjct: 182 VVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHG 241
Query: 299 YALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDD 358
+++++ + VGS+LV +Y C + VF+ + + + +WNAM+ YA++
Sbjct: 242 LSIKSSFDSSSF-VGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQ 300
Query: 359 EAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGY--VVKRGFEKDKYVQN 416
+ I+LF M S PN T ++L AC A L EG + + + + E
Sbjct: 301 KVIELFKRMKL-SGMKPNFITFLNVLNAC--SHAGLVDEGRYYFDQMKESRIEPTDKHYA 357
Query: 417 ALMDMYSRMGRIEISKSIFGSMDRRDIVS-WNTMITGYVV 455
+L+DM R GR++ + + +M S W ++T V
Sbjct: 358 SLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTV 397
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 146/304 (48%), Gaps = 5/304 (1%)
Query: 47 AQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTS 106
AQ+ ++ M+A + PD+ P+ K+ A ++ ++G+ +H K GY
Sbjct: 92 AQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGY-DAD 150
Query: 107 VAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXX 166
V V +SLV+MY KCG++ A +FD + R+ V+W+ M+ +
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 167 XNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAY-TFRNGDWRTFTNNALVTMYAKLGRID 225
N+ ++ S+ C+N L LG+Q+H + D +F ++LV++Y+K G +
Sbjct: 211 ENLAVNDYSFSSVISVCAN-STLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 226 EAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACS 285
A +F K+L WN ++ + +Q+ ++ + M SG++P+ +T + L ACS
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 286 HLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI-LRRTVAVW 344
H ++ G+ + ++ + + ++LVDM + + V + + T +VW
Sbjct: 330 HAGLVDEGR-YYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVW 388
Query: 345 NAMI 348
A++
Sbjct: 389 GALL 392
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/675 (32%), Positives = 344/675 (50%), Gaps = 29/675 (4%)
Query: 74 FPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRI 133
+ ++L A ++ K +H HV G S + ++L Y CG + A +F+ +
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGGRVSGHIL--STLSVTYALCGHITYARKLFEEM 75
Query: 134 SDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD--PTSFTLVSIAHACSNLRDGLS 191
+S+N +I R V P +T +A A L+ +
Sbjct: 76 PQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKS-MK 134
Query: 192 LGKQVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLS 250
LG VH R+ R + NAL+ MY G+++ A+ +F + ++D++SWNT+IS
Sbjct: 135 LGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYY 194
Query: 251 QNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNS 310
+N +AL+ M+ V D T+ S LP C HL+ L G+ +H + L D
Sbjct: 195 RNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKL-VEEKRLGDKI 253
Query: 311 FVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYE 370
V +ALV+MY C + D+ R+VFD + RR V W MI GY + + A++L M +E
Sbjct: 254 EVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFE 313
Query: 371 SDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEI 430
PN+ T++SL+ C D + +HG+ V++ D ++ +L+ MY++ R+++
Sbjct: 314 G-VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDL 372
Query: 431 SKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSV 490
+F + W+ +I G V DAL L M+R ED E PN
Sbjct: 373 CFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRR------EDVE-----PNIA 421
Query: 491 TLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVF--- 547
TL ++LP IH Y K + + + L+ +Y+KCG L + +F
Sbjct: 422 TLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGI 481
Query: 548 -DQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACS 606
++ +++V+ W LI YGMHG G AL++F MV + PNE+T+ + ACS
Sbjct: 482 QEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMV-----RSGVTPNEITFTSALNACS 536
Query: 607 HSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDA 666
HSG+V+EGL LF M ++ S+HY C+VDLLGR+GR++EAY LI T+P
Sbjct: 537 HSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTST-V 595
Query: 667 WSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKE 726
W +LL AC H+N+++GE+AA +L LEP +YVLL+NIY++ G W +R M+
Sbjct: 596 WGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMEN 655
Query: 727 MGVRKEPGCSWIEHR 741
+G+RK+PG S IE R
Sbjct: 656 VGLRKKPGHSTIEIR 670
Score = 229 bits (585), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 158/536 (29%), Positives = 253/536 (47%), Gaps = 26/536 (4%)
Query: 43 LRLQAQSSSFLQAISTYANMVAAGVP--PDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKF 100
+R+ + + AIS + MV+ GV PD + +P V KAA + + LG +HG + +
Sbjct: 87 IRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRS 146
Query: 101 GYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXX 160
+ V N+L+ MY G + A VFD + +RD +SWN+MI+ R
Sbjct: 147 WFGRDKY-VQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMM 205
Query: 161 XXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYT--FRNGDWRTFTNNALVTMY 218
+VD T+VS+ C +L+D L +G+ VH R GD + NALV MY
Sbjct: 206 FDWMVNESVDLDHATIVSMLPVCGHLKD-LEMGRNVHKLVEEKRLGD-KIEVKNALVNMY 263
Query: 219 AKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLA 278
K GR+DEA+ +F + +D+++W +I+ +++ E AL M GVRP+ VT+A
Sbjct: 264 LKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIA 323
Query: 279 SALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILR 338
S + C + GK +HG+A+R + + + ++L+ MY CK+ D VF G +
Sbjct: 324 SLVSVCGDALKVNDGKCLHGWAVRQ-QVYSDIIIETSLISMYAKCKRVDLCFRVFSGASK 382
Query: 339 RTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEG 398
W+A+IAG +NE +A+ LF M E D PN TL+SLLPA
Sbjct: 383 YHTGPWSAIIAGCVQNELVSDALGLFKRMRRE-DVEPNIATLNSLLPAYAALADLRQAMN 441
Query: 399 IHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDR----RDIVSWNTMITGYV 454
IH Y+ K GF L+ +YS+ G +E + IF + +D+V W +I+GY
Sbjct: 442 IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYG 501
Query: 455 VCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAY 514
+ G +AL + +M R + PN +T + L C + +
Sbjct: 502 MHGDGHNALQVFMEMVRS-----------GVTPNEITFTSALNACSHSGLVEEGLTLFRF 550
Query: 515 ALKQ-KLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVIT-WNVLIMAYGMH 568
L+ K + ++D+ + G L+ + + +P T W L+ A H
Sbjct: 551 MLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTH 606
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/701 (30%), Positives = 365/701 (52%), Gaps = 27/701 (3%)
Query: 39 WIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVF 98
W ++ + + +++ + +M+ +G PD+F P V+ A A + ++G +HG V
Sbjct: 93 WNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVL 152
Query: 99 KFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXX 158
K G + AV S V Y KCG L A VFD + DRD V+W ++I+ +
Sbjct: 153 KHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGL 212
Query: 159 XXXXXXXXXNVD---PTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRT-FTNNAL 214
D P TL ACSNL L G+ +H + +NG + F +++
Sbjct: 213 GYLCKMHSAGSDVDKPNPRTLECGFQACSNL-GALKEGRCLHGFAVKNGLASSKFVQSSM 271
Query: 215 VTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDG 274
+ Y+K G EA F D+D+ SW ++I+SL+++ EE+ + M G+ PDG
Sbjct: 272 FSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDG 331
Query: 275 VTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFD 334
V ++ + + ++ GK HG+ +R+ +D++ V ++L+ MYC + +F
Sbjct: 332 VVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDST-VCNSLLSMYCKFELLSVAEKLFC 390
Query: 335 GILRR-TVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAF 393
I WN M+ GY + + + I+LF + +S + +S++ +C A
Sbjct: 391 RISEEGNKEAWNTMLKGYGKMKCHVKCIELF-RKIQNLGIEIDSASATSVISSCSHIGAV 449
Query: 394 LDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGY 453
L + +H YVVK + V N+L+D+Y +MG + ++ +F D ++++WN MI Y
Sbjct: 450 LLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-NVITWNAMIASY 508
Query: 454 VVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHA 513
V C + + A+ L M S KP+S+TL+T+L C IH
Sbjct: 509 VHCEQSEKAIALFDRMV-----------SENFKPSSITLVTLLMACVNTGSLERGQMIHR 557
Query: 514 YALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEE 573
Y + + ++++ +ALIDMYAKCG L SR +FD ++ + WNV+I YGMHG E
Sbjct: 558 YITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVES 617
Query: 574 ALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDH 633
A+ LF +M +++P T++A+ +AC+H+G+V++G LF M + ++P+ H
Sbjct: 618 AIALFDQM-----EESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMH-QYDVKPNLKH 671
Query: 634 YACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVL 693
Y+CLVDLL RSG +EEA + +MP + V W +LL +C H E+G A++ +
Sbjct: 672 YSCLVDLLSRSGNLEEAESTVMSMPFSPDGV-IWGTLLSSCMTHGEFEMGIRMAERAVAS 730
Query: 694 EPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPG 734
+P +Y++L+N+YS+AG W++A R+ M+E GV K G
Sbjct: 731 DPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAG 771
Score = 166 bits (421), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 210/468 (44%), Gaps = 23/468 (4%)
Query: 209 FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQS 268
F + L++ YA G+ + + +F L +D+ WN++I + N + +L F + ML S
Sbjct: 60 FVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLS 119
Query: 269 GVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADK 328
G PD T + AC+ L G +HG L++ N+ VG++ V Y C
Sbjct: 120 GQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQD 179
Query: 329 GRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEM-VYESDF-TPNSTTLSSLLPA 386
VFD + R V W A+I+G+ +N + + +M SD PN TL A
Sbjct: 180 ACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQA 239
Query: 387 CVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSW 446
C A + +HG+ VK G K+VQ+++ YS+ G + F + D+ SW
Sbjct: 240 CSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSW 299
Query: 447 NTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXX 506
++I G +++ ++ +MQ + D I N + M ++P
Sbjct: 300 TSIIASLARSGDMEESFDMFWEMQ--NKGMHPDGVVISCLINELGKMMLVP--------- 348
Query: 507 XXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR-NVITWNVLIMAY 565
H + ++ + D V ++L+ MY K L+++ +F ++ N WN ++ Y
Sbjct: 349 QGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY 408
Query: 566 GMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANH 625
G + +ELFR++ N I + + ++ ++CSH G V G +L H
Sbjct: 409 GKMKCHVKCIELFRKI-----QNLGIEIDSASATSVISSCSHIGAVLLGKSL-HCYVVKT 462
Query: 626 GIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGA 673
++ + L+DL G+ G + A+++ +N V W++++ +
Sbjct: 463 SLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTN---VITWNAMIAS 507
Score = 151 bits (382), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 205/437 (46%), Gaps = 20/437 (4%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W + A+S ++ + M G+ PD ++ + + GK HG V
Sbjct: 298 SWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFV 357
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDR-DHVSWNSMIAAACRFXXXXX 156
+ ++ S V NSL++MY K L+ A +F RIS+ + +WN+M+ +
Sbjct: 358 IRHCFSLDST-VCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVK 416
Query: 157 XXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALV 215
++ S + S+ +CS++ L LGK +H Y + D N+L+
Sbjct: 417 CIELFRKIQNLGIEIDSASATSVISSCSHIGAVL-LGKSLHCYVVKTSLDLTISVVNSLI 475
Query: 216 TMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGV 275
+Y K+G + A +F D ++++WN +I+S ++ E+A+ M+ +P +
Sbjct: 476 DLYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSI 534
Query: 276 TLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDG 335
TL + L AC + L G+ IH Y + T+ N + +AL+DMY C +K R +FD
Sbjct: 535 TLVTLLMACVNTGSLERGQMIHRY-ITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDA 593
Query: 336 ILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLD 395
++ WN MI+GY + + AI LF +M ESD P T +LL AC A L
Sbjct: 594 GNQKDAVCWNVMISGYGMHGDVESAIALFDQM-EESDVKPTGPTFLALLSACTH--AGLV 650
Query: 396 KEG------IHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD-RRDIVSWNT 448
++G +H Y VK + + L+D+ SR G +E ++S SM D V W T
Sbjct: 651 EQGKKLFLKMHQYDVKPNLKH----YSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGT 706
Query: 449 MITGYVVCGRHDDALNL 465
+++ + G + + +
Sbjct: 707 LLSSCMTHGEFEMGIRM 723
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 126/282 (44%), Gaps = 21/282 (7%)
Query: 403 VVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDA 462
++ G ++ +V + L+ Y+ G+ +S +F + RRDI WN++I + G + +
Sbjct: 50 IITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARS 109
Query: 463 LNLLHDM-QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQ-KL 520
L M GQ P+ T V+ C +H LK
Sbjct: 110 LCFFFSMLLSGQS------------PDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGF 157
Query: 521 ATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRR 580
+ AVG++ + Y+KCG L + +VFD+MP R+V+ W +I + +G+ E L +
Sbjct: 158 DRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCK 217
Query: 581 M-VAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVD 639
M A D +K PN T F ACS+ G + EG L H +G+ S + +
Sbjct: 218 MHSAGSDVDK---PNPRTLECGFQACSNLGALKEGRCL-HGFAVKNGLASSKFVQSSMFS 273
Query: 640 LLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLE 681
+SG EAY + + + + +W+S++ + ++E
Sbjct: 274 FYSKSGNPSEAYLSFRELGD--EDMFSWTSIIASLARSGDME 313
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 127/310 (40%), Gaps = 49/310 (15%)
Query: 512 HAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKG 571
+A + L+ +I V S LI YA G NLS VF + R++ WN +I A+ +G
Sbjct: 47 NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDY 106
Query: 572 EEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACS-----HSGMVDEGLNLFHTMKANHG 626
+L F M+ S P+ T + +AC+ H G GL L H G
Sbjct: 107 ARSLCFFFSMLLSGQS-----PDHFTAPMVVSACAELLWFHVGTFVHGLVLKHG-----G 156
Query: 627 IEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGA------------- 673
+ ++ A V + G +++A + MP + V AW++++
Sbjct: 157 FDRNTAVGASFVYFYSKCGFLQDACLVFDEMPD--RDVVAWTAIISGHVQNGESEGGLGY 214
Query: 674 -CKIH-----------QNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIR 721
CK+H + LE G A L L+ H + N +S+ +M
Sbjct: 215 LCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSM--F 272
Query: 722 KKMKEMGVRKEPGCSWIEHRDE-VHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPD- 779
+ G E S+ E DE + + + AS +S ++ E + + M+ +G PD
Sbjct: 273 SFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFD-MFWEMQNKGMHPDG 331
Query: 780 --TSCVLHDV 787
SC+++++
Sbjct: 332 VVISCLINEL 341
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 231/713 (32%), Positives = 377/713 (52%), Gaps = 54/713 (7%)
Query: 178 SIAHACS---NLRDGLSLGKQV--HAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFG 232
++ AC+ NL DG++L + H Y + N L+ MYAK G I A+ +F
Sbjct: 64 ALFQACAEQRNLLDGINLHHHMLSHPYCYSQN---VILANFLINMYAKCGNILYARQVFD 120
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRT 292
++++VSW +I+ Q +E ML S P+ TL+S L +C +
Sbjct: 121 TMPERNVVSWTALITGYVQAGNEQEGFCLFSSML-SHCFPNEFTLSSVLTSCRY----EP 175
Query: 293 GKEIHGYALRNTDLIDNSFVGSALVDMYCNC---KKADKGRWVFDGILRRTVAVWNAMIA 349
GK++HG AL+ L + +V +A++ MY C A + VF+ I + + WN+MIA
Sbjct: 176 GKQVHGLALK-LGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIA 234
Query: 350 GYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKE------GIHGYV 403
+ +AI +F+ M + + TL ++ + + + E +H
Sbjct: 235 AFQCCNLGKKAIGVFMRM-HSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLT 293
Query: 404 VKRGFEKDKYVQNALMDMYSRMGR-IEISKSIFGSMDR-RDIVSWNTMITGYVVCGRHDD 461
VK G V AL+ +YS M +F M RDIV+WN +IT + V +
Sbjct: 294 VKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDP-ER 352
Query: 462 ALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLA 521
A++L +++ + L P+ T +VL C IHA +K
Sbjct: 353 AIHLFGQLRQEK-----------LSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFL 401
Query: 522 TDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRM 581
D + ++LI YAKCG L+L VFD M +R+V++WN ++ AY +HG+ + L +F++M
Sbjct: 402 ADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM 461
Query: 582 VAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLL 641
+I P+ T+IA+ +ACSH+G V+EGL +F +M P +HYAC++D+L
Sbjct: 462 --------DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDML 513
Query: 642 GRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLL-VLEPNVASH 700
R+ R EA ++IK MP + V W +LLG+C+ H N +G++AA +L ++EP +
Sbjct: 514 SRAERFAEAEEVIKQMPMDPDAV-VWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMS 572
Query: 701 YVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKEL 760
Y+ +SNIY++ G +++A K+M+ VRKEP SW E ++VH+F +G P + +
Sbjct: 573 YIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAV 632
Query: 761 HEYLENLLQRMRKEGYVPDT-SCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGT--- 816
+ L+ L+ +++ GYVP+ S D+E++E L HSE+LA+AF ++ +
Sbjct: 633 YRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCG 692
Query: 817 --TIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
I++ KN R+C DCH K SK++ +EI++RD RFHHF++ +CSC DYW
Sbjct: 693 VNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 150/587 (25%), Positives = 258/587 (43%), Gaps = 55/587 (9%)
Query: 36 PSA----WIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGK 91
PSA +++ LR +S +A+S + + A A+ A+ +A A +L G
Sbjct: 22 PSALKREFVEGLRTLVRSGDIRRAVSLFYS--APVELQSQQAYAALFQACAEQRNLLDGI 79
Query: 92 QIHGHVFKFGYA-STSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACR 150
+H H+ Y S +V +AN L+NMY KCG++ A VFD + +R+ VSW ++I +
Sbjct: 80 NLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQ 139
Query: 151 FXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTF 209
+ P FTL S+ +C GKQVH + G +
Sbjct: 140 -AGNEQEGFCLFSSMLSHCFPNEFTLSSVLTSCR-----YEPGKQVHGLALKLGLHCSIY 193
Query: 210 TNNALVTMYAKL---GRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHML 266
NA+++MY + EA +F K+LV+WN++I++ + ++A+ M
Sbjct: 194 VANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMH 253
Query: 267 QSGVRPDGVTLASALPACSHL---------EMLRTGKEIHGYALRNTDLIDNSFVGSALV 317
GV D TL L CS L E+ + ++H ++ + L+ + V +AL+
Sbjct: 254 SDGVGFDRATL---LNICSSLYKSSDLVPNEVSKCCLQLHSLTVK-SGLVTQTEVATALI 309
Query: 318 DMYCNCKK--ADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDE-AIKLFIEMVYESDFT 374
+Y + D + + R + WN +I +A +D E AI LF ++ E +
Sbjct: 310 KVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFA--VYDPERAIHLFGQLRQE-KLS 366
Query: 375 PNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSI 434
P+ T SS+L AC IH V+K GF D + N+L+ Y++ G +++ +
Sbjct: 367 PDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRV 426
Query: 435 FGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMT 494
F MD RD+VSWN+M+ Y + G+ D L + M + P+S T +
Sbjct: 427 FDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD--------------INPDSATFIA 472
Query: 495 VLPGCXXXXXXXXXXEIHAYAL-KQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPT- 552
+L C I K + + + +IDM ++ + V QMP
Sbjct: 473 LLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMD 532
Query: 553 RNVITWNVLIMAYGMHGK---GEEALELFRRMVAEKDSNKEIRPNEV 596
+ + W L+ + HG G+ A + + +V +S I+ + +
Sbjct: 533 PDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNI 579
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 225/728 (30%), Positives = 364/728 (50%), Gaps = 77/728 (10%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R +W + + + + +A+ Y MV G P F +VL A + V D G +
Sbjct: 101 RDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRC 160
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAG-AHHVFDRISDRDHVSWNSMIAAACRFX 152
HG K G ++ V N+L++MY KCG + VF+ +S + VS+ ++I R
Sbjct: 161 HGVAVKTGL-DKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLAREN 219
Query: 153 XXXXXXXXXXXXXXXNVDPTSFTLVSIA------HACSNLRD--GLSLGKQVHAYTFR-- 202
V S L +I C +L + G LGKQ+H R
Sbjct: 220 KVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLG 279
Query: 203 -NGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLF 261
GD NN+L+ +YAK ++ A+ +F + ++VSWN +I Q R ++++ F
Sbjct: 280 FGGDLHL--NNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEF 337
Query: 262 LYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYC 321
L M SG +P+ VT S L AC R+G
Sbjct: 338 LTRMRDSGFQPNEVTCISVLGAC-----FRSGD--------------------------- 365
Query: 322 NCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLS 381
+ GR +F I + +V+ WNAM++GY+ E +EAI F +M ++ + P+ TTLS
Sbjct: 366 ----VETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQ-NLKPDKTTLS 420
Query: 382 SLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGS-MDR 440
+L +C R + + IHG V++ K+ ++ + L+ +YS ++EIS+ IF ++
Sbjct: 421 VILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINE 480
Query: 441 RDIVSWNTMITGYVVCGRHD----DALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVL 496
DI WN+MI+G+ RH+ AL L M ++ L PN + TVL
Sbjct: 481 LDIACWNSMISGF----RHNMLDTKALILFRRMH----------QTAVLCPNETSFATVL 526
Query: 497 PGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVI 556
C + H +K +D V +AL DMY KCG ++ +R FD + +N +
Sbjct: 527 SSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTV 586
Query: 557 TWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLN 616
WN +I YG +G+G+EA+ L+R+M++ + +P+ +T++++ ACSHSG+V+ GL
Sbjct: 587 IWNEMIHGYGHNGRGDEAVGLYRKMISSGE-----KPDGITFVSVLTACSHSGLVETGLE 641
Query: 617 LFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKI 676
+ +M+ HGIEP DHY C+VD LGR+GR+E+A KL + P V W LL +C++
Sbjct: 642 ILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSV-LWEILLSSCRV 700
Query: 677 HQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCS 736
H ++ + A++L+ L+P ++ YVLLSN YSS WD + ++ M + V K PG S
Sbjct: 701 HGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQS 760
Query: 737 WIEHRDEV 744
W + +++
Sbjct: 761 WTTYGNDL 768
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 179/727 (24%), Positives = 301/727 (41%), Gaps = 139/727 (19%)
Query: 90 GKQIHGHVFKFGYASTSVAVANSLVNMYGKCGD--------------------------- 122
GK IHG + + G S + + N L+++Y +CGD
Sbjct: 25 GKVIHGFIVRMGMKSDTY-LCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 123 ----LAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVS 178
L A VFD + +RD VSWN+MI+ R P+ FTL S
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 179 IAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRI-DEAKALFGLFDD 236
+ ACS + DG+ G + H + G D F NAL++MYAK G I D +F
Sbjct: 144 VLSACSKVLDGV-FGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ 202
Query: 237 KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALP------ACSHLEML 290
+ VS+ VI L++ ++ EA+ M + GV+ D V L++ L C L +
Sbjct: 203 PNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEI 262
Query: 291 ---RTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAM 347
GK+IH ALR + + ++L+++Y K + +F + V WN M
Sbjct: 263 YGNELGKQIHCLALR-LGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIM 321
Query: 348 IAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRG 407
I G+ + D++++ F+ + +S F PN T S+L AC
Sbjct: 322 IVGFGQEYRSDKSVE-FLTRMRDSGFQPNEVTCISVLGACF------------------- 361
Query: 408 FEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLH 467
R G +E + IF S+ + + +WN M++GY +++A++
Sbjct: 362 ----------------RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFR 405
Query: 468 DMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVG 527
MQ +++ LKP+ TL +L C +IH ++ +++ + +
Sbjct: 406 QMQ------FQN-----LKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIV 454
Query: 528 SALIDMYAKCGCLNLSRIVFDQ-MPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKD 586
S LI +Y++C + +S +FD + ++ WN +I + + +AL LFRRM
Sbjct: 455 SGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRM----H 510
Query: 587 SNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDL------ 640
+ PNE ++ + ++CS + G FH + G S L D+
Sbjct: 511 QTAVLCPNETSFATVLSSCSRLCSLLHGRQ-FHGLVVKSGYVSDSFVETALTDMYCKCGE 569
Query: 641 -------------------------LGRSGRVEEAYKLIKTMPSNMKKVDA--WSSLLGA 673
G +GR +EA L + M S+ +K D + S+L A
Sbjct: 570 IDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTA 629
Query: 674 CKIHQNLEVG-EI--AAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVR 730
C +E G EI + +++ +EP + HY+ + + AG + A +K+ E
Sbjct: 630 CSHSGLVETGLEILSSMQRIHGIEPEL-DHYICIVDCLGRAGRLEDA----EKLAEATPY 684
Query: 731 KEPGCSW 737
K W
Sbjct: 685 KSSSVLW 691
Score = 149 bits (377), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 221/471 (46%), Gaps = 55/471 (11%)
Query: 270 VRPDGVTLASALPACSHLEMLR-TGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADK 328
+R G ++L C E + +GK IHG+ +R + ++++ + L+D+Y C D
Sbjct: 1 MRSGGNKYLASLLRCYRDERCKLSGKVIHGFIVR-MGMKSDTYLCNRLLDLYIECGDGDY 59
Query: 329 GR-------------W------------------VFDGILRRTVAVWNAMIAGYARNEFD 357
R W VFDG+ R V WN MI+ R F+
Sbjct: 60 ARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFE 119
Query: 358 DEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNA 417
++A+ ++ MV + F P+ TL+S+L AC + + HG VK G +K+ +V NA
Sbjct: 120 EKALVVYKRMVCDG-FLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNA 178
Query: 418 LMDMYSRMGRI-EISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDE 476
L+ MY++ G I + +F S+ + + VS+ +I G R + L + M R ++
Sbjct: 179 LLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGL---ARENKVLEAVQ-MFRLMCEK 234
Query: 477 YEDDESIPLKPNSVTLMTVLPGCXXXXXX---XXXXEIHAYALKQKLATDIAVGSALIDM 533
+S+ L N +++ GC +IH AL+ D+ + ++L+++
Sbjct: 235 GVQVDSVCL-SNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEI 293
Query: 534 YAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRP 593
YAK +N + ++F +MP NV++WN++I+ +G + ++++E RM +DS +P
Sbjct: 294 YAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRM---RDSG--FQP 348
Query: 594 NEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKL 653
NEVT I++ AC SG V+ G +F ++ +PS + ++ EEA
Sbjct: 349 NEVTCISVLGACFRSGDVETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISN 403
Query: 654 IKTMPSNMKKVD--AWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYV 702
+ M K D S +L +C + LE G+ ++ E + SH V
Sbjct: 404 FRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIV 454
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 357 bits (915), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 206/610 (33%), Positives = 331/610 (54%), Gaps = 29/610 (4%)
Query: 175 TLVSIAHACSNLRDGLSLGKQVHAYTFRNG--DWRTFTNNALVTMYAKLGRIDEAKALFG 232
T ++ C+ +D +S G+Q+H + R G D +LV MYAK G + A +FG
Sbjct: 62 TCIATLQRCAQRKDYVS-GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFG 120
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRT 292
++D+ +N +IS N +A+ M +G+ PD T S L +E L
Sbjct: 121 -GSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAME-LSD 178
Query: 293 GKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAV-WNAMIAGY 351
K++HG A + + +VGS LV Y + + VFD + R +V WNA++ GY
Sbjct: 179 VKKVHGLAFK-LGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGY 237
Query: 352 ARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKD 411
++ ++A+ +F +M E + T++S+L A + IHG VK G D
Sbjct: 238 SQIFRFEDALLVFSKM-REEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSD 296
Query: 412 KYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQR 471
V NAL+DMY + +E + SIF +MD RD+ +WN+++ + CG HD L L M
Sbjct: 297 IVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML- 355
Query: 472 GQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAY----ALKQKLATDIAVG 527
++P+ VTL TVLP C EIH Y L + +++ +
Sbjct: 356 ----------CSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIH 405
Query: 528 SALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDS 587
++L+DMY KCG L +R+VFD M ++ +WN++I YG+ GE AL++F M
Sbjct: 406 NSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMC----- 460
Query: 588 NKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRV 647
++P+E+T++ + ACSHSG ++EG N M+ + I P+SDHYAC++D+LGR+ ++
Sbjct: 461 RAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKL 520
Query: 648 EEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNI 707
EEAY+L + P V W S+L +C++H N ++ +A K+L LEP YVL+SN+
Sbjct: 521 EEAYELAISKPICDNPV-VWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNV 579
Query: 708 YSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENL 767
Y AG +++ +D+R M++ V+K PGCSWI ++ VH F G+ +HP+ K +H++L +
Sbjct: 580 YVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLV 639
Query: 768 LQRMRKEGYV 777
+ M Y+
Sbjct: 640 ISHMHGHEYM 649
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 167/615 (27%), Positives = 266/615 (43%), Gaps = 75/615 (12%)
Query: 76 AVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISD 135
A L+ A D G+QIHG + + G+ S SLVNMY KCG + A VF S+
Sbjct: 65 ATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SE 123
Query: 136 RDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQ 195
RD +N++I+ + P +T S+ + LS K+
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAME--LSDVKK 181
Query: 196 VHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDK-DLVSWNTVISSLSQND 253
VH F+ G D + + LVT Y+K +++A+ +F D+ D V WN +++ SQ
Sbjct: 182 VHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIF 241
Query: 254 RFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVG 313
RFE+ALL M + GV T+ S L A + + G+ IHG A++ T + V
Sbjct: 242 RFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVK-TGSGSDIVVS 300
Query: 314 SALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDF 373
+AL+DMY K ++ +F+ + R + WN+++ + D + LF M+ S
Sbjct: 301 NALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLC-SGI 359
Query: 374 TPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGF----EKDKYVQNALMDMYSRMGRIE 429
P+ TL+++LP C R + IHGY++ G ++++ N+LMDMY + G +
Sbjct: 360 RPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLR 419
Query: 430 ISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNS 489
++ +F SM +D SWN MI GY V + AL++ M R +KP+
Sbjct: 420 DARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAG-----------VKPDE 468
Query: 490 VTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQ 549
+T + +L C + G LN R Q
Sbjct: 469 ITFVGLLQAC-----------------------------------SHSGFLNEGRNFLAQ 493
Query: 550 MPT-RNVIT----WNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAA 604
M T N++ + +I G K EEA EL +K I N V + +I ++
Sbjct: 494 METVYNILPTSDHYACVIDMLGRADKLEEAYEL--------AISKPICDNPVVWRSILSS 545
Query: 605 CSHSGMVDEGLNLFHTMKANHGIEPS-SDHYACLVDLLGRSGRVEEAYKLIKTM-PSNMK 662
C G D L K H +EP Y + ++ +G+ EE + M N+K
Sbjct: 546 CRLHGNKDLALV---AGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVK 602
Query: 663 KVDAWSSLLGACKIH 677
K S ++ +H
Sbjct: 603 KTPGCSWIVLKNGVH 617
Score = 172 bits (437), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 167/344 (48%), Gaps = 9/344 (2%)
Query: 49 SSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVA 108
+ S L A+ TY M A G+ PD + FP++LK + + +L+ K++HG FK G+ S
Sbjct: 139 NGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKVHGLAFKLGFDS-DCY 196
Query: 109 VANSLVNMYGKCGDLAGAHHVFDRISDR-DHVSWNSMIAAACRFXXXXXXXXXXXXXXXX 167
V + LV Y K + A VFD + DR D V WN+++ +
Sbjct: 197 VGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREE 256
Query: 168 NVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTF-TNNALVTMYAKLGRIDE 226
V + T+ S+ A + D + G+ +H + G +NAL+ MY K ++E
Sbjct: 257 GVGVSRHTITSVLSAFTVSGD-IDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEE 315
Query: 227 AKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH 286
A ++F D++DL +WN+V+ + L ML SG+RPD VTL + LP C
Sbjct: 316 ANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGR 375
Query: 287 LEMLRTGKEIHGYALRNTDL---IDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAV 343
L LR G+EIHGY + + L N F+ ++L+DMY C R VFD + + A
Sbjct: 376 LASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSAS 435
Query: 344 WNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
WN MI GY + A+ +F M + P+ T LL AC
Sbjct: 436 WNIMINGYGVQSCGELALDMFSCMC-RAGVKPDEITFVGLLQAC 478
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 145/298 (48%), Gaps = 23/298 (7%)
Query: 376 NSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDK-YVQNALMDMYSRMGRIEISKSI 434
N T + L C + K ++ + IHG++V++GF D +L++MY++ G + + +
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 435 FGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMT 494
FG + RD+ +N +I+G+VV G DA+ +M+ + P+ T +
Sbjct: 119 FGGSE-RDVFGYNALISGFVVNGSPLDAMETYREMRANG-----------ILPDKYTFPS 166
Query: 495 VLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR- 553
+L G ++H A K +D VGS L+ Y+K + ++ VFD++P R
Sbjct: 167 LLKG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRD 225
Query: 554 NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDE 613
+ + WN L+ Y + E+AL +F +M E + + T ++ +A + SG +D
Sbjct: 226 DSVLWNALVNGYSQIFRFEDALLVFSKMREEG-----VGVSRHTITSVLSAFTVSGDIDN 280
Query: 614 GLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLL 671
G ++ H + G L+D+ G+S +EEA + + M + + + W+S+L
Sbjct: 281 GRSI-HGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAM--DERDLFTWNSVL 335
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 55 AISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGY---ASTSVAVAN 111
++ + M+ +G+ PD VL + L G++IHG++ G S++ + N
Sbjct: 347 TLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHN 406
Query: 112 SLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDP 171
SL++MY KCGDL A VFD + +D SWN MI V P
Sbjct: 407 SLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKP 466
Query: 172 TSFTLVSIAHACSN---LRDGLSLGKQVHA-YTFRNGDWRTFTNNALVTMYAKLGRIDEA 227
T V + ACS+ L +G + Q+ Y T++ + LGR D+
Sbjct: 467 DEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILP------TSDHYACVIDMLGRADKL 520
Query: 228 KALFGLFDDKDL----VSWNTVISS 248
+ + L K + V W +++SS
Sbjct: 521 EEAYELAISKPICDNPVVWRSILSS 545
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 356 bits (913), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 213/620 (34%), Positives = 335/620 (54%), Gaps = 32/620 (5%)
Query: 194 KQVHAYTFRNG--DWRTFTNNALVTMYAKLG-RIDEAKALFGLFDDKDLVSWNTVISSLS 250
KQ+H+ + G TF V ++LG + A LF + D+V WN +I S
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWS 110
Query: 251 QNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH-LEMLRTGKEIHGYALRNTDLIDN 309
+ D E + +ML+ GV PD T L L GK++H + ++ L N
Sbjct: 111 KVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVK-FGLGSN 169
Query: 310 SFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVY 369
+V +ALV MY C D R VFD + V WN MI+GY R + +E+I+L +EM
Sbjct: 170 LYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEM-E 228
Query: 370 ESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIE 429
+ +P S TL +L AC + K + +H YV + E ++NAL++ Y+ G ++
Sbjct: 229 RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMD 288
Query: 430 ISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDM----------------QRGQ 473
I+ IF SM RD++SW +++ GYV G A M + G
Sbjct: 289 IAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGC 348
Query: 474 DDE----YEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSA 529
+E + + +S + P+ T+++VL C I Y K K+ D+ VG+A
Sbjct: 349 FNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNA 408
Query: 530 LIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNK 589
LIDMY KCGC ++ VF M R+ TW +++ +G+G+EA+++F +M +
Sbjct: 409 LIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQM-----QDM 463
Query: 590 EIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEE 649
I+P+++TY+ + +AC+HSGMVD+ F M+++H IEPS HY C+VD+LGR+G V+E
Sbjct: 464 SIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKE 523
Query: 650 AYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYS 709
AY++++ MP N + W +LLGA ++H + + E+AAK++L LEP+ + Y LL NIY+
Sbjct: 524 AYEILRKMPMNPNSI-VWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYA 582
Query: 710 SAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQ 769
W ++R+K+ ++ ++K PG S IE H+F+AGD SH QS+E++ LE L Q
Sbjct: 583 GCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQ 642
Query: 770 RMRKEGYVPDTSCVLHDVDD 789
Y+PDTS +L + D
Sbjct: 643 ESTFAAYLPDTSELLFEAGD 662
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/369 (32%), Positives = 170/369 (46%), Gaps = 41/369 (11%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAV---LKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVA 110
+ + Y NM+ GV PD+ FP + LK G L GK++H HV KFG S ++ V
Sbjct: 117 EGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGA--LACGKKLHCHVVKFGLGS-NLYVQ 173
Query: 111 NSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD 170
N+LV MY CG + A VFDR D SWN MI+ R V
Sbjct: 174 NALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVS 233
Query: 171 PTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTF-TNNALVTMYAKLGRIDEAKA 229
PTS TL+ + ACS ++D L K+VH Y + NALV YA G +D A
Sbjct: 234 PTSVTLLLVLSACSKVKDK-DLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVR 292
Query: 230 LFGLFDDKDLVSWNTVIS----------------SLSQNDR---------------FEEA 258
+F +D++SW +++ + DR F E+
Sbjct: 293 IFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNES 352
Query: 259 LLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVD 318
L M +G+ PD T+ S L AC+HL L G+ I Y +N + ++ VG+AL+D
Sbjct: 353 LEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNK-IKNDVVVGNALID 411
Query: 319 MYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNST 378
MY C ++K + VF + +R W AM+ G A N EAIK+F +M + P+
Sbjct: 412 MYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQM-QDMSIQPDDI 470
Query: 379 TLSSLLPAC 387
T +L AC
Sbjct: 471 TYLGVLSAC 479
Score = 157 bits (398), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/529 (24%), Positives = 221/529 (41%), Gaps = 49/529 (9%)
Query: 91 KQIHGHVFKFGYASTSVAVANSLVNMYGKCGD-LAGAHHVFDRISDRDHVSWNSMIAAAC 149
KQ+H G A V + G ++ A+ +F +I + D V WN+MI
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWS 110
Query: 150 RFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRT 208
+ V P S T + + L+ GK++H + + G
Sbjct: 111 KVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNL 170
Query: 209 FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQS 268
+ NALV MY+ G +D A+ +F +D+ SWN +IS ++ +EE++ L M ++
Sbjct: 171 YVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERN 230
Query: 269 GVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADK 328
V P VTL L ACS ++ K +H Y + + + +ALV+ Y C + D
Sbjct: 231 LVSPTSVTLLLVLSACSKVKDKDLCKRVHEY-VSECKTEPSLRLENALVNAYAACGEMDI 289
Query: 329 GRWVFDGILRRTVAVWNAMIAGY--------ARNEFD----------------------- 357
+F + R V W +++ GY AR FD
Sbjct: 290 AVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCF 349
Query: 358 DEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNA 417
+E++++F EM + P+ T+ S+L AC + E I Y+ K + D V NA
Sbjct: 350 NESLEIFREM-QSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNA 408
Query: 418 LMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEY 477
L+DMY + G E ++ +F MD+RD +W M+ G G+ +A+ + MQ
Sbjct: 409 LIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQ------- 461
Query: 478 EDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALK-QKLATDIAVGSALIDMYAK 536
+ ++P+ +T + VL C + A ++ + ++DM +
Sbjct: 462 ----DMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGR 517
Query: 537 CGCLNLSRIVFDQMPTR-NVITWNVLIMAYGMHGKGEEALELFRRMVAE 584
G + + + +MP N I W L+ A +H E EL + + E
Sbjct: 518 AGLVKEAYEILRKMPMNPNSIVWGALLGASRLHND-EPMAELAAKKILE 565
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 1/152 (0%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R +W + ++ F +++ + M +AG+ PD F +VL A A + L +G+ I
Sbjct: 331 RDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWI 390
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
++ K V V N+L++MY KCG A VF + RD +W +M+
Sbjct: 391 KTYIDK-NKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 449
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSN 185
++ P T + + AC++
Sbjct: 450 GQEAIKVFFQMQDMSIQPDDITYLGVLSACNH 481
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 355 bits (911), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 227/721 (31%), Positives = 366/721 (50%), Gaps = 49/721 (6%)
Query: 70 DNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHV 129
D LKA G DL G QIHG G+ S V V+N+++ MY K G A +
Sbjct: 77 DEVTLCLALKACRG--DLKRGCQIHGFSTTSGFTSF-VCVSNAVMGMYRKAGRFDNALCI 133
Query: 130 FDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDG 189
F+ + D D VSWN++++ F V +FT + C +G
Sbjct: 134 FENLVDPDVVSWNTILSG---FDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVG-SEG 189
Query: 190 LSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISS 248
LG Q+ + + G + N+ +TMY++ G A+ +F KD++SWN+++S
Sbjct: 190 FLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSG 249
Query: 249 LSQNDRFE-EALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRN--TD 305
LSQ F EA++ M++ GV D V+ S + C H L+ ++IHG ++
Sbjct: 250 LSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYES 309
Query: 306 LIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFI 365
L++ VG+ L+ Y C + + VF + R V W MI+ D+A+ +F+
Sbjct: 310 LLE---VGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSN-----KDDAVSIFL 361
Query: 366 EMVYESDFTPNSTTLSSLLPACVRCKAFLDKEG--IHGYVVKRGFEKDKYVQNALMDMYS 423
M ++ + PN T L+ A V+C + KEG IHG +K GF + V N+ + +Y+
Sbjct: 362 NMRFDGVY-PNEVTFVGLINA-VKCNEQI-KEGLKIHGLCIKTGFVSEPSVGNSFITLYA 418
Query: 424 RMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESI 483
+ +E +K F + R+I+SWN MI+G+ G +AL + +
Sbjct: 419 KFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLS------------AAA 466
Query: 484 PLKPNSVTLMTVLPGCXXXX--XXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLN 541
PN T +VL HA+ LK L + V SAL+DMYAK G ++
Sbjct: 467 ETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNID 526
Query: 542 LSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAI 601
S VF++M +N W +I AY HG E + LF +M+ E + P+ VT++++
Sbjct: 527 ESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKEN-----VAPDLVTFLSV 581
Query: 602 FAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNM 661
AC+ GMVD+G +F+ M + +EPS +HY+C+VD+LGR+GR++EA +L+ +P
Sbjct: 582 LTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGP 641
Query: 662 KKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIR 721
+ S+LG+C++H N+++G A+ + ++P ++ YV + NIY+ WD+A +IR
Sbjct: 642 GE-SMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIR 700
Query: 722 KKMKEMGVRKEPGCSWIEHRD-----EVHKFLAGDASHPQSKELHEYLENLLQRMRKEGY 776
K M++ V KE G SWI+ D + F +GD SHP+S E++ +E + M EG
Sbjct: 701 KAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEGK 760
Query: 777 V 777
V
Sbjct: 761 V 761
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 190/399 (47%), Gaps = 19/399 (4%)
Query: 38 AWIDHLRLQAQSSSF-LQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGH 96
+W L +Q +F +A+ + +M+ GV D+ +F +V+ DL L +QIHG
Sbjct: 242 SWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGL 301
Query: 97 VFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXX 156
K GY S + V N L++ Y KCG L VF ++S+R+ VSW +MI++
Sbjct: 302 CIKRGYESL-LEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDD 355
Query: 157 XXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALV 215
V P T V + +A + + G ++H + G N+ +
Sbjct: 356 AVSIFLNMRFDGVYPNEVTFVGLINAV-KCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFI 414
Query: 216 TMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEAL-LFLYHMLQSGVRPDG 274
T+YAK +++AK F ++++SWN +IS +QN EAL +FL ++ P+
Sbjct: 415 TLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAET--MPNE 472
Query: 275 VTLASALPACSHLE--MLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWV 332
T S L A + E ++ G+ H + L+ L V SAL+DMY D+ V
Sbjct: 473 YTFGSVLNAIAFAEDISVKQGQRCHAHLLK-LGLNSCPVVSSALLDMYAKRGNIDESEKV 531
Query: 333 FDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKA 392
F+ + ++ VW ++I+ Y+ + + + LF +M+ E + P+ T S+L AC R K
Sbjct: 532 FNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKE-NVAPDLVTFLSVLTACNR-KG 589
Query: 393 FLDK--EGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIE 429
+DK E + + E + ++DM R GR++
Sbjct: 590 MVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLK 628
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 354 bits (908), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 220/678 (32%), Positives = 345/678 (50%), Gaps = 38/678 (5%)
Query: 74 FPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRI 133
F ++L+ +L LG+ IH H+ K +S V +L +Y C ++ A HVFD I
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 134 SDR--DHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLS 191
+ ++W+ MI A V PT +T + AC+ LR +
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLR-AID 120
Query: 192 LGKQVHAYTFRNGDWRT--FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSL 249
GK +H++ D+ T + ALV YAK G ++ A +F +D+V+WN +IS
Sbjct: 121 DGKLIHSHV-NCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGF 179
Query: 250 SQNDRFEEAL-LFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALR---NTD 305
S + + + LFL G+ P+ T+ PA LR GK +HGY R + D
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 306 LIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFI 365
L+ V + ++D+Y K R VFD ++ W+AMI GY NE EA ++F
Sbjct: 240 LV----VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFF 295
Query: 366 EMVYESDF---TPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMY 422
+M+ + TP + L +L C R +H Y VK GF D VQN ++ Y
Sbjct: 296 QMLVNDNVAMVTPVAIGL--ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFY 353
Query: 423 SRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDES 482
++ G + + F + +D++S+N++ITG VV R +++ L H+M+
Sbjct: 354 AKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSG--------- 404
Query: 483 IPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNL 542
++P+ TL+ VL C H Y + A + ++ +AL+DMY KCG L++
Sbjct: 405 --IRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDV 462
Query: 543 SRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIF 602
++ VFD M R++++WN ++ +G+HG G+EAL LF M + P+EVT +AI
Sbjct: 463 AKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSM-----QETGVNPDEVTLLAIL 517
Query: 603 AACSHSGMVDEGLNLFHTM-KANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNM 661
+ACSHSG+VDEG LF++M + + + P DHY C+ DLL R+G ++EAY + MP
Sbjct: 518 SACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFE- 576
Query: 662 KKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIR 721
+ +LL AC ++N E+G +K++ L S VLLSN YS+A W+ A IR
Sbjct: 577 PDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAARIR 635
Query: 722 KKMKEMGVRKEPGCSWIE 739
K+ G+ K PG SW++
Sbjct: 636 MIQKKRGLLKTPGYSWVD 653
Score = 206 bits (523), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 148/475 (31%), Positives = 232/475 (48%), Gaps = 31/475 (6%)
Query: 35 SPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIH 94
+P AW +R A + +A+ Y M+ +GV P + +P VLKA AG+ ++ GK IH
Sbjct: 67 NPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIH 126
Query: 95 GHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAA-ACRFXX 153
HV +A T + V +LV+ Y KCG+L A VFD + RD V+WN+MI+ +
Sbjct: 127 SHVNCSDFA-TDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCL 185
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNA 213
+ P T+V + A L GK VH Y R G F+N+
Sbjct: 186 TDVIGLFLDMRRIDGLSPNLSTIVGMFPALGR-AGALREGKAVHGYCTRMG----FSNDL 240
Query: 214 LVT-----MYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQS 268
+V +YAK I A+ +F L K+ V+W+ +I +N+ +EA + ML +
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN 300
Query: 269 G----VRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCK 324
V P V + L C+ L G+ +H YA++ ++D + V + ++ Y
Sbjct: 301 DNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLT-VQNTIISFYAKYG 357
Query: 325 KADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLL 384
F I + V +N++I G N +E+ +LF EM S P+ TTL +L
Sbjct: 358 SLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEM-RTSGIRPDITTLLGVL 416
Query: 385 PACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIV 444
AC A HGY V G+ + + NALMDMY++ G+++++K +F +M +RDIV
Sbjct: 417 TACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIV 476
Query: 445 SWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
SWNTM+ G+ + G +AL+L + MQ + P+ VTL+ +L C
Sbjct: 477 SWNTMLFGFGIHGLGKEALSLFNSMQE-----------TGVNPDEVTLLAILSAC 520
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 352 bits (902), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 218/710 (30%), Positives = 359/710 (50%), Gaps = 36/710 (5%)
Query: 70 DNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHV 129
D+ + + + AA + LGK HGH+ K + + + N+L+NMY KC +L A +
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIK-SSLNPCLYLLNNLLNMYCKCRELGFARQL 104
Query: 130 FDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDG 189
FDR+ +R+ +S+NS+I+ + N+ FT C R
Sbjct: 105 FDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE-RCD 163
Query: 190 LSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISS 248
L LG+ +H NG + F N L+ MY+K G++D+A +LF D++D VSWN++IS
Sbjct: 164 LDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISG 223
Query: 249 LSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACS---HLEMLRTGKEIHGYALR--- 302
+ EE L L M + G+ L S L AC + + G IH Y +
Sbjct: 224 YVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGM 283
Query: 303 NTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYAR-----NEFD 357
D++ V +AL+DMY + +F + + V +NAMI+G+ + +E
Sbjct: 284 EFDIV----VRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEAS 339
Query: 358 DEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNA 417
EA KLF++M P+ +T S +L AC K IH + K F+ D+++ +A
Sbjct: 340 SEAFKLFMDM-QRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSA 398
Query: 418 LMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEY 477
L+++Y+ MG E F S ++DI SW +MI +V + + A +L +
Sbjct: 399 LIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQL-------- 450
Query: 478 EDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKC 537
S ++P T+ ++ C +I YA+K + +V ++ I MYAK
Sbjct: 451 ---FSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKS 507
Query: 538 GCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVT 597
G + L+ VF ++ +V T++ +I + HG EAL +F M I+PN+
Sbjct: 508 GNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESM-----KTHGIKPNQQA 562
Query: 598 YIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTM 657
++ + AC H G+V +GL F MK ++ I P+ H+ CLVDLLGR+GR+ +A LI +
Sbjct: 563 FLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSS 622
Query: 658 PSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQA 717
V W +LL +C+++++ +G+ A++L+ LEP + YVLL NIY+ +G+ A
Sbjct: 623 GFQDHPV-TWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSA 681
Query: 718 MDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENL 767
++R+ M++ GV+KEP SWI ++ H F D SHP S+ ++ LE +
Sbjct: 682 EEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 208 bits (530), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 218/460 (47%), Gaps = 22/460 (4%)
Query: 48 QSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSV 107
Q + QA+ + A + D F + L DL+LG+ +HG V G S V
Sbjct: 125 QMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGL-SQQV 183
Query: 108 AVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXX 167
+ N L++MY KCG L A +FDR +RD VSWNS+I+ R
Sbjct: 184 FLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRD 243
Query: 168 NVDPTSFTLVSIAHACS-NLRDG-LSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRI 224
++ T++ L S+ AC NL +G + G +H YT + G ++ AL+ MYAK G +
Sbjct: 244 GLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSL 303
Query: 225 DEAKALFGLFDDKDLVSWNTVISSLSQNDRF-----EEALLFLYHMLQSGVRPDGVTLAS 279
EA LF L K++V++N +IS Q D EA M + G+ P T +
Sbjct: 304 KEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSV 363
Query: 280 ALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRR 339
L ACS + L G++IH +N + + F+GSAL+++Y + G F ++
Sbjct: 364 VLKACSAAKTLEYGRQIHALICKN-NFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQ 422
Query: 340 TVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGI 399
+A W +MI + +NE + A LF ++ + S P T+S ++ AC A E I
Sbjct: 423 DIASWTSMIDCHVQNEQLESAFDLFRQL-FSSHIRPEEYTVSLMMSACADFAALSSGEQI 481
Query: 400 HGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRH 459
GY +K G + V+ + + MY++ G + ++ +F + D+ +++ MI+ G
Sbjct: 482 QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSA 541
Query: 460 DDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
++ALN+ M+ + +KPN + VL C
Sbjct: 542 NEALNIFESMK-----------THGIKPNQQAFLGVLIAC 570
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 3/241 (1%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+A + +M G+ P F VLKA + L G+QIH + K + S + ++L
Sbjct: 341 EAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEF-IGSAL 399
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
+ +Y G F S +D SW SMI + ++ P
Sbjct: 400 IELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEE 459
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFG 232
+T+ + AC++ LS G+Q+ Y ++G D T + ++MYAK G + A +F
Sbjct: 460 YTVSLMMSACADFA-ALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFI 518
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRT 292
+ D+ +++ +ISSL+Q+ EAL M G++P+ L AC H ++
Sbjct: 519 EVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQ 578
Query: 293 G 293
G
Sbjct: 579 G 579
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 351 bits (901), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 197/548 (35%), Positives = 315/548 (57%), Gaps = 37/548 (6%)
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTP-----NSTTLSSLLPA 386
+F I + WNA+I G+A + A + M+ +S + ++ T S L A
Sbjct: 59 IFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKA 118
Query: 387 CVR--CKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIV 444
C R C + +D+ +H + +RG D + L+D YS+ G + + +F M RD+
Sbjct: 119 CARALCSSAMDQ--LHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVA 176
Query: 445 SWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXX 504
SWN +I G V R +A+ L Y+ E+ ++ + VT++ L C
Sbjct: 177 SWNALIAGLVSGNRASEAMEL-----------YKRMETEGIRRSEVTVVAALGACSHLGD 225
Query: 505 XXXXXEI-HAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMP-TRNVITWNVLI 562
I H Y+ ++ V +A IDMY+KCG ++ + VF+Q ++V+TWN +I
Sbjct: 226 VKEGENIFHGYS-----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMI 280
Query: 563 MAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMK 622
+ +HG+ ALE+F +K + I+P++V+Y+A AC H+G+V+ GL++F+ M
Sbjct: 281 TGFAVHGEAHRALEIF-----DKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNM- 334
Query: 623 ANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEV 682
A G+E + HY C+VDLL R+GR+ EA+ +I +M S + W SLLGA +I+ ++E+
Sbjct: 335 ACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSM-SMIPDPVLWQSLLGASEIYSDVEM 393
Query: 683 GEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRD 742
EIA++++ + N +VLLSN+Y++ G W +R M+ V+K PG S+IE +
Sbjct: 394 AEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKG 453
Query: 743 EVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSER 802
+H+F D SH Q +E++E ++ + ++R++GYV T VLHD+ +EEKE LC HSE+
Sbjct: 454 TIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEK 513
Query: 803 LAIAFGLL---NTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNG 859
LA+A+GL+ + +RV NLR+C DCHV K ISKI REII+RD RFH F++G
Sbjct: 514 LAVAYGLMMMDGADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDG 573
Query: 860 TCSCGDYW 867
+CSC D+W
Sbjct: 574 SCSCRDFW 581
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 18/283 (6%)
Query: 173 SFTLVSIAHA-CSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKAL 230
SFTL + A A CS+ D Q+H R G + L+ Y+K G + A L
Sbjct: 113 SFTLKACARALCSSAMD------QLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKL 166
Query: 231 FGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEML 290
F +D+ SWN +I+ L +R EA+ M G+R VT+ +AL ACSHL +
Sbjct: 167 FDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDV 226
Query: 291 RTGKEI-HGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGIL-RRTVAVWNAMI 348
+ G+ I HGY+ DN V +A +DMY C DK VF+ +++V WN MI
Sbjct: 227 KEGENIFHGYS------NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMI 280
Query: 349 AGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGF 408
G+A + A+++F + + ++ P+ + + L AC + + +G
Sbjct: 281 TGFAVHGEAHRALEIF-DKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGV 339
Query: 409 EKDKYVQNALMDMYSRMGRIEISKSIFGSMDR-RDIVSWNTMI 450
E++ ++D+ SR GR+ + I SM D V W +++
Sbjct: 340 ERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLL 382
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 118/262 (45%), Gaps = 12/262 (4%)
Query: 39 WIDHLRLQAQSSSFLQAISTYANMVA------AGVPPDNFAFPAVLKAAAGVNDLNLGKQ 92
W +R A SS A S Y +M+ A D LKA A + Q
Sbjct: 71 WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQ 130
Query: 93 IHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFX 152
+H + + G ++ S+ + +L++ Y K GDL A+ +FD + RD SWN++IA
Sbjct: 131 LHCQINRRGLSADSL-LCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGN 189
Query: 153 XXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNN 212
+ + T+V+ ACS+L D H Y+ N +N
Sbjct: 190 RASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDN----VIVSN 245
Query: 213 ALVTMYAKLGRIDEAKALFGLFD-DKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVR 271
A + MY+K G +D+A +F F K +V+WNT+I+ + + AL + +G++
Sbjct: 246 AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIK 305
Query: 272 PDGVTLASALPACSHLEMLRTG 293
PD V+ +AL AC H ++ G
Sbjct: 306 PDDVSYLAALTACRHAGLVEYG 327
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 350 bits (899), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 198/652 (30%), Positives = 346/652 (53%), Gaps = 21/652 (3%)
Query: 126 AHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSN 185
A +F ++ R WN+++ + R P +FTL AC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 186 LRDGLSLGKQVHAYTFRNGDWRT--FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWN 243
LR+ ++ G+ +H + ++ + + ++L+ MY K GR+ EA +F + D+V+W+
Sbjct: 73 LRE-VNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 244 TVISSLSQNDRFEEALLFLYHM-LQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALR 302
+++S +N +A+ F M + S V PD VTL + + AC+ L R G+ +HG+ +R
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 303 NTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIK 362
D S V S L++ Y + + +F I + V W+ +IA Y +N EA+
Sbjct: 192 RGFSNDLSLVNS-LLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALL 250
Query: 363 LFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMY 422
+F +M+ + PN T+ +L AC H +++G E + V AL+DMY
Sbjct: 251 VFNDMM-DDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMY 309
Query: 423 SRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDES 482
+ E + ++F + R+D+VSW +I+G+ + G ++ M +
Sbjct: 310 MKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNT------- 362
Query: 483 IPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNL 542
+P+++ ++ VL C H+Y +K ++ +G++L+++Y++CG L
Sbjct: 363 ---RPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGN 419
Query: 543 SRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIF 602
+ VF+ + ++ + W LI YG+HGKG +ALE F MV + E++PNEVT+++I
Sbjct: 420 ASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMV----KSSEVKPNEVTFLSIL 475
Query: 603 AACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMK 662
+ACSH+G++ EGL +F M ++ + P+ +HYA LVDLLGR G ++ A ++ K MP +
Sbjct: 476 SACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFS-P 534
Query: 663 KVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRK 722
+LLGAC+IHQN E+ E AK+L LE N A +Y+L+SN+Y G W+ +R
Sbjct: 535 TPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRN 594
Query: 723 KMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKE 774
+K+ G++K S IE R +VH+F+A D HP+ + ++ L+ L M+++
Sbjct: 595 SVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKED 646
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/503 (29%), Positives = 260/503 (51%), Gaps = 24/503 (4%)
Query: 226 EAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACS 285
+A+ +FG + L WNT++ SLS+ ++EE L HM + +PD TL AL AC
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 286 HLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWN 345
L + G+ IHG+ ++ L + +VGS+L+ MY C + + +FD + + + W+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 346 AMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVK 405
+M++G+ +N +A++ F MV SD TP+ TL +L+ AC + +HG+V++
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 406 RGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNL 465
RGF D + N+L++ Y++ + + ++F + +D++SW+T+I YV G +AL +
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 466 LHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIA 525
+DM DD E PN T++ VL C + H A+++ L T++
Sbjct: 252 FNDM---MDDGTE--------PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVK 300
Query: 526 VGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEK 585
V +AL+DMY KC + VF ++P ++V++W LI + ++G ++E F M+ E
Sbjct: 301 VSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN 360
Query: 586 DSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSG 645
++ RP+ + + + +CS G +++ FH+ +G + + A LV+L R G
Sbjct: 361 NT----RPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCG 415
Query: 646 RVEEAYKLIKTMPSNMKKVDAWSSLLGACKIH----QNLEVGEIAAKQLLVLEPNVASHY 701
+ A K+ + +K W+SL+ IH + LE K V +PN +
Sbjct: 416 SLGNASKVFNGIA--LKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEV-KPNEVTFL 472
Query: 702 VLLSNIYSSAGLWDQAMDIRKKM 724
+LS S AGL + + I K M
Sbjct: 473 SILSAC-SHAGLIHEGLRIFKLM 494
Score = 241 bits (615), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 161/565 (28%), Positives = 272/565 (48%), Gaps = 29/565 (5%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
RS W L+ ++ + + + +++M PDNF P LKA + ++N G+ I
Sbjct: 23 RSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMI 82
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACR-FX 152
HG V K + + V +SL+ MY KCG + A +FD + D V+W+SM++ +
Sbjct: 83 HGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGS 142
Query: 153 XXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTN- 211
+V P TL+++ AC+ L + LG+ VH + R G F+N
Sbjct: 143 PYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNS-RLGRCVHGFVIRRG----FSND 197
Query: 212 ----NALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQ 267
N+L+ YAK EA LF + +KD++SW+TVI+ QN EALL M+
Sbjct: 198 LSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMD 257
Query: 268 SGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKAD 327
G P+ T+ L AC+ L G++ H A+R L V +ALVDMY C +
Sbjct: 258 DGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPE 316
Query: 328 KGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
+ VF I R+ V W A+I+G+ N +I+ F M+ E++ P++ + +L +C
Sbjct: 317 EAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSC 376
Query: 388 VRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWN 447
+ H YV+K GF+ + ++ +L+++YSR G + + +F + +D V W
Sbjct: 377 SELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWT 436
Query: 448 TMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXX 507
++ITGY + G+ AL + M + + +KPN VT +++L C
Sbjct: 437 SLITGYGIHGKGTKALETFNHMVKSSE----------VKPNEVTFLSILSACSHAGLIHE 486
Query: 508 XXEIHAYALKQ-KLATDIAVGSALIDMYAKCGCLNLSRIVFDQM---PTRNVITWNVLIM 563
I + +LA ++ + L+D+ + G L+ + + +M PT ++ L+
Sbjct: 487 GLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQIL--GTLLG 544
Query: 564 AYGMHGKGEEALELFRRMVAEKDSN 588
A +H GE A E + + E +SN
Sbjct: 545 ACRIHQNGEMA-ETVAKKLFELESN 568
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 350 bits (897), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 203/584 (34%), Positives = 312/584 (53%), Gaps = 20/584 (3%)
Query: 212 NALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVR 271
N+L+++YAK G++ +A LF +D++S N V +N E + L ML SG
Sbjct: 94 NSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-G 152
Query: 272 PDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRW 331
D TL L C E K IH A+ + + S VG+ L+ Y C + GR
Sbjct: 153 FDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEIS-VGNKLITSYFKCGCSVSGRG 211
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCK 391
VFDG+ R V A+I+G NE ++ ++LF ++ PNS T S L AC +
Sbjct: 212 VFDGMSHRNVITLTAVISGLIENELHEDGLRLF-SLMRRGLVHPNSVTYLSALAACSGSQ 270
Query: 392 AFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMIT 451
++ + IH + K G E + +++ALMDMYS+ G IE + +IF S D VS ++
Sbjct: 271 RIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILV 330
Query: 452 GYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEI 511
G G ++A+ M + + + N V+ VL ++
Sbjct: 331 GLAQNGSEEEAIQFFIRMLQA---------GVEIDANVVS--AVLGVSFIDNSLGLGKQL 379
Query: 512 HAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKG 571
H+ +K+K + + V + LI+MY+KCG L S+ VF +MP RN ++WN +I A+ HG G
Sbjct: 380 HSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHG 439
Query: 572 EEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSS 631
AL+L+ M + E++P +VT++++ ACSH G++D+G L + MK HGIEP +
Sbjct: 440 LAALKLYEEM-----TTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRT 494
Query: 632 DHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLL 691
+HY C++D+LGR+G ++EA I ++P W +LLGAC H + EVGE AA+QL
Sbjct: 495 EHYTCIIDMLGRAGLLKEAKSFIDSLPLK-PDCKIWQALLGACSFHGDTEVGEYAAEQLF 553
Query: 692 VLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGD 751
P+ +S ++L++NIYSS G W + K+MK MGV KE G S IE + H F+ D
Sbjct: 554 QTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVED 613
Query: 752 ASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETM 795
HPQ++ +++ L L M EGY PD +L D+ T+
Sbjct: 614 KLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFILCYTGDDRNGTV 657
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 169/376 (44%), Gaps = 12/376 (3%)
Query: 91 KQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACR 150
K IH GY ++V N L+ Y KCG VFD +S R+ ++ ++I+
Sbjct: 175 KMIHALAILSGY-DKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIE 233
Query: 151 FXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTF 209
V P S T +S ACS + + G+Q+HA ++ G +
Sbjct: 234 NELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVE-GQQIHALLWKYGIESELC 292
Query: 210 TNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSG 269
+AL+ MY+K G I++A +F + D VS ++ L+QN EEA+ F MLQ+G
Sbjct: 293 IESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
Query: 270 VRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKG 329
V D +++ L L GK++H ++ N+FV + L++MY C
Sbjct: 353 VEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKR-KFSGNTFVNNGLINMYSKCGDLTDS 411
Query: 330 RWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVR 389
+ VF + +R WN+MIA +AR+ A+KL+ EM + P T SLL AC
Sbjct: 412 QTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMT-TLEVKPTDVTFLSLLHACSH 470
Query: 390 CKAFLDK--EGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD-RRDIVSW 446
+DK E ++ G E ++DM R G ++ +KS S+ + D W
Sbjct: 471 V-GLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIW 529
Query: 447 NTMITGYVVCGRHDDA 462
++ C H D
Sbjct: 530 QALLGA---CSFHGDT 542
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 189/421 (44%), Gaps = 30/421 (7%)
Query: 312 VGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYES 371
V ++L+ +Y C K +FD + R V N + G+ RN + L M+
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151
Query: 372 DFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEIS 431
F + TL+ +L C + L + IH + G++K+ V N L+ Y + G
Sbjct: 152 GF--DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSG 209
Query: 432 KSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVT 491
+ +F M R++++ +I+G + H+D L L M+RG + PNSVT
Sbjct: 210 RGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGL-----------VHPNSVT 258
Query: 492 LMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMP 551
++ L C +IHA K + +++ + SAL+DMY+KCG + + +F+
Sbjct: 259 YLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTT 318
Query: 552 TRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMV 611
+ ++ V+++ +G EEA++ F RM+ + EI N + +A +
Sbjct: 319 EVDEVSMTVILVGLAQNGSEEEAIQFFIRML---QAGVEIDAN------VVSAVLGVSFI 369
Query: 612 DEGLNL---FHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWS 668
D L L H++ ++ L+++ + G + ++ + + MP + +W+
Sbjct: 370 DNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPK--RNYVSWN 427
Query: 669 SLLGACKIHQNLEVGEIAAKQLLVLE--PNVASHYVLLSNIYSSAGLWDQAMDIRKKMKE 726
S++ A H + +++ LE P + LL + S GL D+ ++ +MKE
Sbjct: 428 SMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLL-HACSHVGLIDKGRELLNEMKE 486
Query: 727 M 727
+
Sbjct: 487 V 487
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 150/322 (46%), Gaps = 21/322 (6%)
Query: 67 VPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGA 126
V P++ + + L A +G + G+QIH ++K+G S + + ++L++MY KCG + A
Sbjct: 252 VHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIES-ELCIESALMDMYSKCGSIEDA 310
Query: 127 HHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNL 186
+F+ ++ D VS ++ + V+ + +VS S +
Sbjct: 311 WTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDA-NVVSAVLGVSFI 369
Query: 187 RDGLSLGKQVHAYTF-RNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTV 245
+ L LGKQ+H+ R TF NN L+ MY+K G + +++ +F ++ VSWN++
Sbjct: 370 DNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSM 429
Query: 246 ISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHL-------EMLRTGKEIHG 298
I++ +++ AL M V+P VT S L ACSH+ E+L KE+HG
Sbjct: 430 IAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHG 489
Query: 299 YALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI-LRRTVAVWNAMIAGYARNEFD 357
R + ++DM + + D + L+ +W A++ G D
Sbjct: 490 IEPRTEHY-------TCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALL-GACSFHGD 541
Query: 358 DEAIKLFIEMVYESDFTPNSTT 379
E + E ++++ P+S++
Sbjct: 542 TEVGEYAAEQLFQT--APDSSS 561
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 102/211 (48%), Gaps = 13/211 (6%)
Query: 47 AQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTS 106
AQ+ S +AI + M+ AGV D AVL + N L LGKQ+H V K ++ +
Sbjct: 333 AQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNT 392
Query: 107 VAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXX 166
V N L+NMY KCGDL + VF R+ R++VSWNSMIAA R
Sbjct: 393 F-VNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTT 451
Query: 167 XNVDPTSFTLVSIAHACSNL------RDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAK 220
V PT T +S+ HACS++ R+ L+ K+VH + RT ++ M +
Sbjct: 452 LEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGI-----EPRTEHYTCIIDMLGR 506
Query: 221 LGRIDEAKALFGLFDDK-DLVSWNTVISSLS 250
G + EAK+ K D W ++ + S
Sbjct: 507 AGLLKEAKSFIDSLPLKPDCKIWQALLGACS 537
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 143/318 (44%), Gaps = 22/318 (6%)
Query: 414 VQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQ 473
V N+L+ +Y++ G++ + +F M RD++S N + G++ + LL M
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151
Query: 474 DDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDM 533
++ TL VL C IHA A+ +I+VG+ LI
Sbjct: 152 GFDH------------ATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITS 199
Query: 534 YAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRP 593
Y KCGC R VFD M RNVIT +I + E+ L LF M + P
Sbjct: 200 YFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLM-----RRGLVHP 254
Query: 594 NEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKL 653
N VTY++ AACS S + EG + H + +GIE + L+D+ + G +E+A+ +
Sbjct: 255 NSVTYLSALAACSGSQRIVEGQQI-HALLWKYGIESELCIESALMDMYSKCGSIEDAWTI 313
Query: 654 IKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQL---LVLEPNVASHYVLLSNIYSS 710
++ + + +V L+G + E + + L + ++ NV S + +S I +S
Sbjct: 314 FES-TTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNS 372
Query: 711 AGLWDQAMDIRKKMKEMG 728
GL Q + K K G
Sbjct: 373 LGLGKQLHSLVIKRKFSG 390
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 350 bits (897), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 208/702 (29%), Positives = 355/702 (50%), Gaps = 33/702 (4%)
Query: 79 KAAAGVNDLNLGKQIHGHVFKFGY--ASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDR 136
+ + L +QIH V G A+ S N+L++MY +CG L A VFD++ R
Sbjct: 102 RKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHR 161
Query: 137 DHVSWNSMIAAACRFXXXXXXXXXXXXXXXXN-VDPTSFTLVSIAHACSNLRD---GLSL 192
+ VS+N++ +A R V P S T S+ C+ L D G SL
Sbjct: 162 NVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSL 221
Query: 193 GKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQN 252
Q+ + + +++ MY+ G ++ A+ +F +++D V+WNT+I +N
Sbjct: 222 NSQIIKLGYSDN---VVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKN 278
Query: 253 DRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFV 312
D+ E+ L+F +ML SGV P T + L CS L GK IH + + L D +
Sbjct: 279 DKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLP-L 337
Query: 313 GSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESD 372
+AL+DMYC+C + +VF I + WN++I+G + N F ++A+ ++ ++ S
Sbjct: 338 DNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMST 397
Query: 373 FTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISK 432
P+ T S+ + A + F+ + +HG V K G+E+ +V L+ MY + E ++
Sbjct: 398 PRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQ 457
Query: 433 SIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTL 492
+F M RD+V W MI G+ G + A+ +M R ++ + + +L
Sbjct: 458 KVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKN-----------RSDGFSL 506
Query: 493 MTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPT 552
+V+ C H A++ ++V AL+DMY K G + +F
Sbjct: 507 SSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASN 566
Query: 553 RNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVD 612
++ WN ++ AY HG E+AL F +++ P+ VTY+++ AACSH G
Sbjct: 567 PDLKCWNSMLGAYSQHGMVEKALSFFEQILENG-----FMPDAVTYLSLLAACSHRGSTL 621
Query: 613 EGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLG 672
+G L++ MK GI+ HY+C+V+L+ ++G V+EA +LI+ P + + W +LL
Sbjct: 622 QGKFLWNQMK-EQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLS 680
Query: 673 ACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKE 732
AC +NL++G AA+Q+L L+P + ++LLSN+Y+ G W+ ++R+K++ + K+
Sbjct: 681 ACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKD 740
Query: 733 PGCSWIE-HRDEVHKFLAGDASHPQ-----SKELHEYLENLL 768
PG SWIE + + F +GD S+P+ EL+ N+L
Sbjct: 741 PGLSWIEVNNNNTQVFSSGDQSNPEVVSQAQDELNRLKRNML 782
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 155/633 (24%), Positives = 284/633 (44%), Gaps = 35/633 (5%)
Query: 111 NSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSM------IAAACRFXXXXXXXXXXXXX 164
N+L++MY +C L A VFD++ R+ V+ + ++
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 165 XXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG----DWRTFTNNALVTMYAK 220
++ + ++V + C ++ L +Q+HA G + NN L++MY +
Sbjct: 86 FFMPLNEIASSVVELTRKCVSI-TVLKRARQIHALVLTAGAGAATESPYANNNLISMYVR 144
Query: 221 LGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEE-ALLFLYHMLQSGVRPDGVTLAS 279
G +++A+ +F +++VS+N + S+ S+N F A HM V+P+ T S
Sbjct: 145 CGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTS 204
Query: 280 ALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRR 339
+ C+ LE + G ++ ++ DN V ++++ MY +C + R +FD + R
Sbjct: 205 LVQVCAVLEDVLMGSSLNSQIIK-LGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNR 263
Query: 340 TVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGI 399
WN MI G +N+ ++ + F M+ S P T S +L C + ++ + I
Sbjct: 264 DAVAWNTMIVGSLKNDKIEDGLMFFRNMLM-SGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 400 HGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRH 459
H ++ D + NAL+DMY G + + +FG + ++VSWN++I+G G
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFG 382
Query: 460 DDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQK 519
+ A+ + + R S P +P+ T + +H K
Sbjct: 383 EQAMLMYRRLLR---------MSTP-RPDEYTFSAAISATAEPERFVHGKLLHGQVTKLG 432
Query: 520 LATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFR 579
+ VG+ L+ MY K ++ VFD M R+V+ W +I+ + G E A++ F
Sbjct: 433 YERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFI 492
Query: 580 RMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVD 639
M EK+ R + + ++ ACS M+ +G +FH + G + LVD
Sbjct: 493 EMYREKN-----RSDGFSLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVD 546
Query: 640 LLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLV--LEPNV 697
+ G++G+ E A + I ++ SN + W+S+LGA H +E +Q+L P+
Sbjct: 547 MYGKNGKYETA-ETIFSLASN-PDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDA 604
Query: 698 ASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVR 730
++ LL+ S G Q + +MKE G++
Sbjct: 605 VTYLSLLAAC-SHRGSTLQGKFLWNQMKEQGIK 636
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 218/489 (44%), Gaps = 31/489 (6%)
Query: 209 FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVS---WNTVISSLSQNDRFEEALLFLYHM 265
+ NN L++MY + +++A+ +F +++V+ + V +S ++ L
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 266 LQSGVRPDGVTLASALP---ACSHLEMLRTGKEIHGYALR--NTDLIDNSFVGSALVDMY 320
P +S + C + +L+ ++IH L ++ + + L+ MY
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 321 CNCKKADKGRWVFDGILRRTVAVWNAMIAGYARN-EFDDEAIKLFIEMVYESDFTPNSTT 379
C ++ R VFD + R V +NA+ + Y+RN +F A L M +E PNS+T
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEY-VKPNSST 201
Query: 380 LSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD 439
+SL+ C + L ++ ++K G+ + VQ +++ MYS G +E ++ IF ++
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN 261
Query: 440 RRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
RD V+WNTMI G + + +D L +M D P T VL GC
Sbjct: 262 NRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVD-----------PTQFTYSIVLNGC 310
Query: 500 XXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWN 559
IHA + D+ + +AL+DMY CG + + VF ++ N+++WN
Sbjct: 311 SKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWN 370
Query: 560 VLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFH 619
+I +G GE+A+ ++RR++ RP+E T+ A +A + G L H
Sbjct: 371 SIISGCSENGFGEQAMLMYRRLLRMSTP----RPDEYTFSAAISATAEPERFVHG-KLLH 425
Query: 620 TMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQN 679
G E S L+ + ++ E A K+ M + V W+ ++ H
Sbjct: 426 GQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKE--RDVVLWTEMIVG---HSR 480
Query: 680 LEVGEIAAK 688
L E+A +
Sbjct: 481 LGNSELAVQ 489
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 180/376 (47%), Gaps = 12/376 (3%)
Query: 59 YANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVA---VANSLVN 115
+ NM+ +GV P F + VL + + +LGK IH + S S+A + N+L++
Sbjct: 288 FRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARII----VSDSLADLPLDNALLD 343
Query: 116 MYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD-PTSF 174
MY CGD+ A +VF RI + + VSWNS+I+ + P +
Sbjct: 344 MYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEY 403
Query: 175 TLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRT-FTNNALVTMYAKLGRIDEAKALFGL 233
T S A + + + GK +H + G R+ F L++MY K + A+ +F +
Sbjct: 404 TF-SAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDV 462
Query: 234 FDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTG 293
++D+V W +I S+ E A+ F M + R DG +L+S + ACS + MLR G
Sbjct: 463 MKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG 522
Query: 294 KEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYAR 353
+ H A+R S G ALVDMY K + +F + WN+M+ Y++
Sbjct: 523 EVFHCLAIRTGFDCVMSVCG-ALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQ 581
Query: 354 NEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKY 413
+ ++A+ F E + E+ F P++ T SLL AC + L + + + ++G +
Sbjct: 582 HGMVEKALSFF-EQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFK 640
Query: 414 VQNALMDMYSRMGRIE 429
+ ++++ S+ G ++
Sbjct: 641 HYSCMVNLVSKAGLVD 656
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 348 bits (894), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 208/658 (31%), Positives = 339/658 (51%), Gaps = 29/658 (4%)
Query: 112 SLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXN--V 169
SL+N G+L A VFD++ D VSW S+I + V
Sbjct: 49 SLIN----AGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAV 104
Query: 170 DPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRT-FTNNALVTMYAKLGRIDEAK 228
P + L + AC ++ G+ +HAY + + + ++L+ MY ++G+ID++
Sbjct: 105 SPDTSVLSVVLKACGQ-SSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 229 ALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLE 288
+F ++ V+W +I+ L R++E L + M +S D T A AL AC+ L
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 289 MLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMI 348
++ GK IH + + + V ++L MY C + G +F+ + R V W ++I
Sbjct: 224 QVKYGKAIHTHVIVR-GFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLI 282
Query: 349 AGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGF 408
Y R + +A++ FI+M S PN T +S+ AC + E +H V+ G
Sbjct: 283 VAYKRIGQEVKAVETFIKM-RNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGL 341
Query: 409 EKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHD 468
V N++M MYS G + + +F M RDI+SW+T+I GY G ++
Sbjct: 342 NDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSW 401
Query: 469 MQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGS 528
M++ KP L ++L ++HA AL L + V S
Sbjct: 402 MRQSGT-----------KPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRS 450
Query: 529 ALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSN 588
+LI+MY+KCG + + ++F + ++++ +I Y HGK +EA++LF EK
Sbjct: 451 SLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLF-----EKSLK 505
Query: 589 KEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVE 648
RP+ VT+I++ AC+HSG +D G + F+ M+ + + P+ +HY C+VDLL R+GR+
Sbjct: 506 VGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLS 565
Query: 649 EAYKLIKTMPSNMKKVDA-WSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNI 707
+A K+I M + KK D W++LL ACK ++E G AA+++L L+P A+ V L+NI
Sbjct: 566 DAEKMINEM--SWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANI 623
Query: 708 YSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLE 765
YSS G ++A ++RK MK GV KEPG S I+ +D V F++GD HPQS++++ LE
Sbjct: 624 YSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 151/601 (25%), Positives = 265/601 (44%), Gaps = 33/601 (5%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANM--VAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHG 95
+W ++ +++ +A+ ++ M V V PD VLKA +++ G+ +H
Sbjct: 73 SWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHA 132
Query: 96 HVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXX 155
+ K S SV V +SL++MY + G + + VF + R+ V+W ++I
Sbjct: 133 YAVKTSLLS-SVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYK 191
Query: 156 XXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTF-TNNAL 214
++T AC+ LR + GK +H + G T N+L
Sbjct: 192 EGLTYFSEMSRSEELSDTYTFAIALKACAGLRQ-VKYGKAIHTHVIVRGFVTTLCVANSL 250
Query: 215 VTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDG 274
TMY + G + + LF ++D+VSW ++I + + + +A+ M S V P+
Sbjct: 251 ATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNE 310
Query: 275 VTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFD 334
T AS AC+ L L G+++H L + L D+ V ++++ MY C +F
Sbjct: 311 QTFASMFSACASLSRLVWGEQLHCNVL-SLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQ 369
Query: 335 GILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFL 394
G+ R + W+ +I GY + F +E K F M +S P L+SLL
Sbjct: 370 GMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM-RQSGTKPTDFALASLLSVSGNMAVIE 428
Query: 395 DKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYV 454
+H + G E++ V+++L++MYS+ G I+ + IFG DR DIVS MI GY
Sbjct: 429 GGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYA 488
Query: 455 VCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAY 514
G+ +A++L +E + +P+SVT ++VL C H +
Sbjct: 489 EHGKSKEAIDL-----------FEKSLKVGFRPDSVTFISVLTACTHSGQLDLG--FHYF 535
Query: 515 ALKQKLATDIAVG---SALIDMYAKCGCLNLSRIVFDQMP-TRNVITWNVLIMAYGMHGK 570
+ Q+ ++D+ + G L+ + + ++M ++ + W L++A G
Sbjct: 536 NMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGD 595
Query: 571 GEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAAC-SHSGMVDEGLNLFHTMKANHGI-E 628
E R++ E+ P T + A S +G ++E N+ MKA I E
Sbjct: 596 IERGRRAAERIL-------ELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKE 648
Query: 629 P 629
P
Sbjct: 649 P 649
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 212/468 (45%), Gaps = 24/468 (5%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+ W + + + + ++ ++ M + D + F LKA AG+ + GK I
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
H HV G+ +T + VANSL MY +CG++ +F+ +S+RD VSW S+I A R
Sbjct: 232 HTHVIVRGFVTT-LCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQ 290
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFT-NN 212
V P T S+ AC++L L G+Q+H G + + +N
Sbjct: 291 EVKAVETFIKMRNSQVPPNEQTFASMFSACASLSR-LVWGEQLHCNVLSLGLNDSLSVSN 349
Query: 213 ALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRP 272
+++ MY+ G + A LF +D++SW+T+I Q EE + M QSG +P
Sbjct: 350 SMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKP 409
Query: 273 DGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWV 332
LAS L ++ ++ G+++H AL L NS V S+L++MY C + +
Sbjct: 410 TDFALASLLSVSGNMAVIEGGRQVHALAL-CFGLEQNSTVRSSLINMYSKCGSIKEASMI 468
Query: 333 FDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKA 392
F R + AMI GYA + EAI LF E + F P+S T S+L AC
Sbjct: 469 FGETDRDDIVSLTAMINGYAEHGKSKEAIDLF-EKSLKVGFRPDSVTFISVLTACTH-SG 526
Query: 393 FLDKEGIHGYVVKR---GFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD-RRDIVSWNT 448
LD G H + + + K ++D+ R GR+ ++ + M ++D V W T
Sbjct: 527 QLDL-GFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTT 585
Query: 449 MITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVL 496
++ G D++RG+ + + L P T + L
Sbjct: 586 LLIACKAKG----------DIERGRR---AAERILELDPTCATALVTL 620
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 345 bits (886), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 208/651 (31%), Positives = 332/651 (50%), Gaps = 24/651 (3%)
Query: 91 KQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACR 150
+Q HG + G +++A LV++YG G A VFD+I + D W M+ C
Sbjct: 61 RQSHGVLTGNGLMG-DISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCL 119
Query: 151 FXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFT 210
AC+ L+D L GK++H + +
Sbjct: 120 NKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQD-LDNGKKIHCQLVKVPSFDNVV 178
Query: 211 NNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGV 270
L+ MYAK G I A +F +++V W ++I+ +ND EE L+ M ++ V
Sbjct: 179 LTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNV 238
Query: 271 RPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGR 330
+ T + + AC+ L L GK HG +++ + + V ++L+DMY C R
Sbjct: 239 LGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLV-TSLLDMYVKCGDISNAR 297
Query: 331 WVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRC 390
VF+ + +W AMI GY N +EA+ LF +M + PN T++S+L C
Sbjct: 298 RVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM-KGVEIKPNCVTIASVLSGCGLI 356
Query: 391 KAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMI 450
+ +HG +K G D V NAL+ MY++ + +K +F +DIV+WN++I
Sbjct: 357 ENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSII 415
Query: 451 TGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXE 510
+G+ G +AL L H M + ES+ PN VT+ ++ C
Sbjct: 416 SGFSQNGSIHEALFLFHRM---------NSESVT--PNGVTVASLFSACASLGSLAVGSS 464
Query: 511 IHAYALKQKL--ATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMH 568
+HAY++K ++ + VG+AL+D YAKCG +R++FD + +N ITW+ +I YG
Sbjct: 465 LHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQ 524
Query: 569 GKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIE 628
G +LELF M+ K+ +PNE T+ +I +AC H+GMV+EG F +M ++
Sbjct: 525 GDTIGSLELFEEML-----KKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFT 579
Query: 629 PSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAK 688
PS+ HY C+VD+L R+G +E+A +I+ MP V + + L C +H ++GEI K
Sbjct: 580 PSTKHYTCMVDMLARAGELEQALDIIEKMPIQ-PDVRCFGAFLHGCGMHSRFDLGEIVIK 638
Query: 689 QLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIE 739
++L L P+ AS+YVL+SN+Y+S G W+QA ++R MK+ G+ K G S +E
Sbjct: 639 KMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 153/570 (26%), Positives = 263/570 (46%), Gaps = 29/570 (5%)
Query: 39 WIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVF 98
W LR + ++ + Y ++ G D+ F LKA + DL+ GK+IH +
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV 169
Query: 99 KFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXX 158
K S V L++MY KCG++ AH VF+ I+ R+ V W SMIA +
Sbjct: 170 KV--PSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGL 227
Query: 159 XXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTM 217
NV +T ++ AC+ L L GK H ++G + + +L+ M
Sbjct: 228 VLFNRMRENNVLGNEYTYGTLIMACTKL-SALHQGKWFHGCLVKSGIELSSCLVTSLLDM 286
Query: 218 YAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTL 277
Y K G I A+ +F DLV W +I + N EAL M ++P+ VT+
Sbjct: 287 YVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTI 346
Query: 278 ASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGIL 337
AS L C +E L G+ +HG +++ I ++ V +ALV MY C + ++VF+
Sbjct: 347 ASVLSGCGLIENLELGRSVHGLSIKVG--IWDTNVANALVHMYAKCYQNRDAKYVFEMES 404
Query: 338 RRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKE 397
+ + WN++I+G+++N EA+ LF M ES TPN T++SL AC +
Sbjct: 405 EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSES-VTPNGVTVASLFSACASLGSLAVGS 463
Query: 398 GIHGYVVKRGF--EKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVV 455
+H Y VK GF +V AL+D Y++ G + ++ IF +++ ++ ++W+ MI GY
Sbjct: 464 SLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGK 523
Query: 456 CGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYA 515
G +L L +M + Q KPN T ++L C + +
Sbjct: 524 QGDTIGSLELFEEMLKKQQ-----------KPNESTFTSILSACGHTGMVNEGKKYFSSM 572
Query: 516 LKQ-KLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR-NVITWNVLIMAYGMHGKGEE 573
K + ++DM A+ G L + + ++MP + +V + + GMH + +
Sbjct: 573 YKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDL 632
Query: 574 ALELFRRMVAEKDSNKEIRPNEVTYIAIFA 603
+ ++M+ ++ P++ +Y + +
Sbjct: 633 GEIVIKKML-------DLHPDDASYYVLVS 655
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 345 bits (884), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 172/452 (38%), Positives = 267/452 (59%), Gaps = 19/452 (4%)
Query: 416 NALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDD 475
N +++ ++G ++K + + +++++WN MI GYV ++++AL L +M D
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTD- 160
Query: 476 EYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYA 535
+KPN + + L C +H+ + + + + SAL+D+YA
Sbjct: 161 ---------IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYA 211
Query: 536 KCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNE 595
KCG + SR VF + +V WN +I + HG EA+ +F M AE + P+
Sbjct: 212 KCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAE-----HVSPDS 266
Query: 596 VTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIK 655
+T++ + CSH G+++EG F M I+P +HY +VDLLGR+GRV+EAY+LI+
Sbjct: 267 ITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIE 326
Query: 656 TMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWD 715
+MP V W SLL + + ++N E+GEIA + L + YVLLSNIYSS W+
Sbjct: 327 SMPIE-PDVVIWRSLLSSSRTYKNPELGEIAIQNL---SKAKSGDYVLLSNIYSSTKKWE 382
Query: 716 QAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEG 775
A +R+ M + G+RK G SW+E +H+F AGD SH ++K +++ LE L+Q+ + +G
Sbjct: 383 SAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQG 442
Query: 776 YVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATK 835
+V DT VL DV +EEKE L HSE+LA+A+ +L + PGT IR+ KN+R+C+DCH K
Sbjct: 443 FVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIK 502
Query: 836 FISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
+SK+++R II+RD RFH F +G CSC DYW
Sbjct: 503 AVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 13/226 (5%)
Query: 339 RTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEG 398
+ V WN MI GY RN +EA+K M+ +D PN + +S L AC R +
Sbjct: 127 QNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKW 186
Query: 399 IHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGR 458
+H ++ G E + + +AL+D+Y++ G I S+ +F S+ R D+ WN MITG+ G
Sbjct: 187 VHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGL 246
Query: 459 HDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQ 518
+A+ + +M E+ + P+S+T + +L C E ++
Sbjct: 247 ATEAIRVFSEM-----------EAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRR 295
Query: 519 -KLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR-NVITWNVLI 562
+ + A++D+ + G + + + + MP +V+ W L+
Sbjct: 296 FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 143/363 (39%), Gaps = 24/363 (6%)
Query: 45 LQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYAS 104
LQA + F TY +++ + V A N L +++ + F S
Sbjct: 50 LQAHAQIFKLGYGTYPSLLVSTVA-----------AYRRCNRSYLARRL---LLWFLSLS 95
Query: 105 TSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACR-FXXXXXXXXXXXX 163
V N ++ K G+ A V SD++ ++WN MI R
Sbjct: 96 PGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNM 155
Query: 164 XXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLG 222
++ P F+ S AC+ L D L K VH+ +G + ++ALV +YAK G
Sbjct: 156 LSFTDIKPNKFSFASSLAACARLGD-LHHAKWVHSLMIDSGIELNAILSSALVDVYAKCG 214
Query: 223 RIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALP 282
I ++ +F D+ WN +I+ + + EA+ M V PD +T L
Sbjct: 215 DIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLT 274
Query: 283 ACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI-LRRTV 341
CSH +L GKE G R + A+VD+ + + + + + + V
Sbjct: 275 TCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDV 334
Query: 342 AVWNAMIAG---YARNEFDDEAIKLFIEMVYESDFTPNSTTLSSL--LPACVRCKAFLDK 396
+W ++++ Y E + AI+ + D+ S SS + + + + K
Sbjct: 335 VIWRSLLSSSRTYKNPELGEIAIQ-NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSK 393
Query: 397 EGI 399
EGI
Sbjct: 394 EGI 396
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 341 bits (874), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 207/652 (31%), Positives = 334/652 (51%), Gaps = 37/652 (5%)
Query: 127 HHVFDRISDRDHV-SWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSN 185
H RIS V +WN I A +P +FT +A AC+
Sbjct: 5 HRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACAR 64
Query: 186 LRDGLSLGKQVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNT 244
L D + + VHA+ ++ W F A V M+ K +D A +F ++D +WN
Sbjct: 65 LAD-VGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNA 123
Query: 245 VISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALR-N 303
++S Q+ ++A M + + PD VT+ + + + S + L+ + +H +R
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLG 183
Query: 304 TDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILR--RTVAVWNAMIAGYARNEFDDEAI 361
D+ V + + Y C D + VF+ I R RTV WN+M Y+ +A
Sbjct: 184 VDV--QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAF 241
Query: 362 KLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDM 421
L+ M+ E +F P+ +T +L +C + IH + + G ++D N + M
Sbjct: 242 GLYCLMLRE-EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISM 300
Query: 422 YSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDE 481
YS+ ++ +F M R VSW MI+GY G D+AL L H M + +
Sbjct: 301 YSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGE------- 353
Query: 482 SIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHA----YALKQKLATDIAVGSALIDMYAKC 537
KP+ VTL++++ GC I A Y K+ ++ + +ALIDMY+KC
Sbjct: 354 ----KPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRD---NVMICNALIDMYSKC 406
Query: 538 GCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVT 597
G ++ +R +FD P + V+TW +I Y ++G EAL+LF +M+ + + +PN +T
Sbjct: 407 GSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMI-----DLDYKPNHIT 461
Query: 598 YIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTM 657
++A+ AC+HSG +++G FH MK + I P DHY+C+VDLLGR G++EEA +LI+ M
Sbjct: 462 FLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNM 521
Query: 658 PSNMKKVDA--WSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWD 715
+ K DA W +LL ACKIH+N+++ E AA+ L LEP +A+ YV ++NIY++AG+WD
Sbjct: 522 SA---KPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWD 578
Query: 716 QAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENL 767
IR MK+ ++K PG S I+ + H F G+ H +++ ++ L L
Sbjct: 579 GFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGL 630
Score = 203 bits (516), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 157/557 (28%), Positives = 253/557 (45%), Gaps = 49/557 (8%)
Query: 35 SPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIH 94
S +AW +R + ++++ + M G P+NF FP V KA A + D+ + +H
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 95 GHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXX 154
H+ K + S V V + V+M+ KC + A VF+R+ +RD +WN+M++ C+
Sbjct: 76 AHLIKSPFWS-DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 155 XXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNA 213
+ P S T++++ + S L L + +HA R G D + N
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSAS-FEKSLKLLEAMHAVGIRLGVDVQVTVANT 193
Query: 214 LVTMYAKLGRIDEAKALFGLFD--DKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVR 271
++ Y K G +D AK +F D D+ +VSWN++ + S +A ML+ +
Sbjct: 194 WISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFK 253
Query: 272 PDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRW 331
PD T + +C + E L G+ IH +A+ D + + + MY + R
Sbjct: 254 PDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINT-FISMYSKSEDTCSARL 312
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCK 391
+FD + RT W MI+GYA DEA+ LF M+ +S P+ TL SL+ C +
Sbjct: 313 LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMI-KSGEKPDLVTLLSLISGCGKFG 371
Query: 392 AFLDKEGIHGYVVKRGFEKDK-YVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMI 450
+ + I G ++D + NAL+DMYS+ G I ++ IF + + +V+W TMI
Sbjct: 372 SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMI 431
Query: 451 TGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXE 510
GY + G +AL L M D +Y KPN +T + VL C E
Sbjct: 432 AGYALNGIFLEALKLFSKM---IDLDY--------KPNHITFLAVLQACAHSGSLEKGWE 480
Query: 511 IHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGK 570
+ + +KQ +I+ G +D Y+ ++ G GK
Sbjct: 481 -YFHIMKQ--VYNISPG---LDHYS------------------------CMVDLLGRKGK 510
Query: 571 GEEALELFRRMVAEKDS 587
EEALEL R M A+ D+
Sbjct: 511 LEEALELIRNMSAKPDA 527
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 202/427 (47%), Gaps = 14/427 (3%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R + W L QS +A S + M + PD+ ++++A+ L L + +
Sbjct: 116 RDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAM 175
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRI--SDRDHVSWNSMIAAACRF 151
H + G V VAN+ ++ YGKCGDL A VF+ I DR VSWNSM A F
Sbjct: 176 HAVGIRLG-VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVF 234
Query: 152 XXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFT 210
P T +++A +C N + L+ G+ +H++ G D
Sbjct: 235 GEAFDAFGLYCLMLREEFKPDLSTFINLAASCQN-PETLTQGRLIHSHAIHLGTDQDIEA 293
Query: 211 NNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGV 270
N ++MY+K A+ LF + + VSW +IS ++ +EAL + M++SG
Sbjct: 294 INTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGE 353
Query: 271 RPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGR 330
+PD VTL S + C L TGK I A DN + +AL+DMY C + R
Sbjct: 354 KPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEAR 413
Query: 331 WVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRC 390
+FD +TV W MIAGYA N EA+KLF +M+ + D+ PN T ++L AC
Sbjct: 414 DIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMI-DLDYKPNHITFLAVLQACAHS 472
Query: 391 KAFLDKEGIHGYVVKRGFE----KDKYVQNALMDMYSRMGRIEISKSIFGSMDRR-DIVS 445
+ L+K + +++K+ + D Y + ++D+ R G++E + + +M + D
Sbjct: 473 GS-LEKGWEYFHIMKQVYNISPGLDHY--SCMVDLLGRKGKLEEALELIRNMSAKPDAGI 529
Query: 446 WNTMITG 452
W ++
Sbjct: 530 WGALLNA 536
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 340 bits (872), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 217/690 (31%), Positives = 358/690 (51%), Gaps = 37/690 (5%)
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAA--ACRF 151
H + K G S + V+N +++ Y K G L A+ +FD + RD VSWN+MI+ +C
Sbjct: 23 HCYAIKCGSIS-DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 152 XXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFT 210
+VD SF+ + A D LG+QVH + G + +
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFD---LGEQVHGLVIKGGYECNVYV 138
Query: 211 NNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHM-LQSG 269
++LV MYAK R+++A F + + VSWN +I+ Q + A L M +++
Sbjct: 139 GSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAA 198
Query: 270 VRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKG 329
V D T A L K++H L+ L + +A++ Y +C
Sbjct: 199 VTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLK-LGLQHEITICNAMISSYADCGSVSDA 257
Query: 330 RWVFDGIL-RRTVAVWNAMIAGYARNEFDDEAIKLFIEMV---YESDFTPNSTTLSSLLP 385
+ VFDG+ + + WN+MIAG++++E + A +LFI+M E+D T + LL
Sbjct: 258 KRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIY----TYTGLLS 313
Query: 386 ACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRM--GRIEISKSIFGSMDRRDI 443
AC + + + +HG V+K+G E+ NAL+ MY + G +E + S+F S+ +D+
Sbjct: 314 ACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDL 373
Query: 444 VSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXX 503
+SWN++ITG+ G +DA+ ++ + +K + +L C
Sbjct: 374 ISWNSIITGFAQKGLSEDAVKFFSYLRSSE-----------IKVDDYAFSALLRSCSDLA 422
Query: 504 XXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR-NVITWNVLI 562
+IHA A K ++ V S+LI MY+KCG + +R F Q+ ++ + + WN +I
Sbjct: 423 TLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Query: 563 MAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMK 622
+ Y HG G+ +L+LF +M N+ ++ + VT+ AI ACSH+G++ EGL L + M+
Sbjct: 483 LGYAQHGLGQVSLDLFSQMC-----NQNVKLDHVTFTAILTACSHTGLIQEGLELLNLME 537
Query: 623 ANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEV 682
+ I+P +HYA VDLLGR+G V +A +LI++MP N + + LG C+ +E+
Sbjct: 538 PVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPM-VLKTFLGVCRACGEIEM 596
Query: 683 GEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRD 742
A LL +EP YV LS++YS W++ ++K MKE GV+K PG SWIE R+
Sbjct: 597 ATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRN 656
Query: 743 EVHKFLAGDASHPQSKELHEYLENLLQRMR 772
+V F A D S+P ++++ +++L Q M+
Sbjct: 657 QVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 230/506 (45%), Gaps = 34/506 (6%)
Query: 59 YANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYG 118
+ M +G D ++F +LK A V +LG+Q+HG V K GY +V V +SLV+MY
Sbjct: 89 FTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGY-ECNVYVGSSLVDMYA 147
Query: 119 KCGDLAGAHHVFDRISDRDHVSWNSMIAAACR---FXXXXXXXXXXXXXXXXNVDPTSF- 174
KC + A F IS+ + VSWN++IA + +D +F
Sbjct: 148 KCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFA 207
Query: 175 ---TLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFT-NNALVTMYAKLGRIDEAKAL 230
TL+ C+ L KQVHA + G T NA+++ YA G + +AK +
Sbjct: 208 PLLTLLDDPMFCNLL-------KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRV 260
Query: 231 F-GLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEM 289
F GL KDL+SWN++I+ S+++ E A M + V D T L ACS E
Sbjct: 261 FDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEH 320
Query: 290 LRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKA--DKGRWVFDGILRRTVAVWNAM 347
GK +HG ++ L + +AL+ MY + +F+ + + + WN++
Sbjct: 321 QIFGKSLHGMVIKK-GLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSI 379
Query: 348 IAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRG 407
I G+A+ ++A+K F + S+ + S+LL +C + IH K G
Sbjct: 380 ITGFAQKGLSEDAVKFF-SYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSG 438
Query: 408 FEKDKYVQNALMDMYSRMGRIEISKSIFGSM-DRRDIVSWNTMITGYVVCGRHDDALNLL 466
F +++V ++L+ MYS+ G IE ++ F + + V+WN MI GY G +L+L
Sbjct: 439 FVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLF 498
Query: 467 HDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXE-IHAYALKQKLATDIA 525
M +K + VT +L C E ++ K+ +
Sbjct: 499 SQMCNQN-----------VKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRME 547
Query: 526 VGSALIDMYAKCGCLNLSRIVFDQMP 551
+A +D+ + G +N ++ + + MP
Sbjct: 548 HYAAAVDLLGRAGLVNKAKELIESMP 573
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 113/246 (45%), Gaps = 6/246 (2%)
Query: 55 AISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLV 114
A + M V D + + +L A +G GK +HG V K G + A N+L+
Sbjct: 289 AFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSAT-NALI 347
Query: 115 NMYGK--CGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPT 172
+MY + G + A +F+ + +D +SWNS+I + +
Sbjct: 348 SMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVD 407
Query: 173 SFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRT-FTNNALVTMYAKLGRIDEAKALF 231
+ ++ +CS+L L LG+Q+HA ++G F ++L+ MY+K G I+ A+ F
Sbjct: 408 DYAFSALLRSCSDLAT-LQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCF 466
Query: 232 GLFDDK-DLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEML 290
K V+WN +I +Q+ + +L M V+ D VT + L ACSH ++
Sbjct: 467 QQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLI 526
Query: 291 RTGKEI 296
+ G E+
Sbjct: 527 QEGLEL 532
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 339 bits (870), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 213/727 (29%), Positives = 359/727 (49%), Gaps = 68/727 (9%)
Query: 55 AISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLV 114
A+ + M+ + PDNF P V KA + G+ +HG+V K G V VA+SL
Sbjct: 157 ALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDC-VFVASSLA 215
Query: 115 NMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSF 174
+MYGKCG L A VFD I DR+ V+WN+++ + V+PT
Sbjct: 216 DMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRV 275
Query: 175 TLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGL 233
T+ + A +N+ G+ GKQ HA NG + +L+ Y K+G I+ A+ +F
Sbjct: 276 TVSTCLSASANM-GGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDR 334
Query: 234 FDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTG 293
+KD+V+WN +IS Q E+A+ M ++ D VTLA+ + A + E L+ G
Sbjct: 335 MFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLG 394
Query: 294 KEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYAR 353
KE+ Y +R++ + + S ++DMY C + VFD + + + +WN ++A YA
Sbjct: 395 KEVQCYCIRHS-FESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAE 453
Query: 354 NEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKY 413
+ EA++LF M E PN T + ++ + +
Sbjct: 454 SGLSGEALRLFYGMQLEG-VPPNVITWNLIILSLL------------------------- 487
Query: 414 VQNALMDMYSRMGRIEISKSIFGSMDRRDI----VSWNTMITGYVVCGRHDDALNLLHDM 469
R G+++ +K +F M I +SW TM+ G V G ++A+ L M
Sbjct: 488 ----------RNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Query: 470 QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQ-KLATDIAVGS 528
Q L+PN+ ++ L C IH Y ++ + ++ +++ +
Sbjct: 538 QES-----------GLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIET 586
Query: 529 ALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSN 588
+L+DMYAKCG +N + VF + N +I AY ++G +EA+ L+R +
Sbjct: 587 SLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSL-----EG 641
Query: 589 KEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVE 648
++P+ +T + +AC+H+G +++ + +F + + ++P +HY +VDLL +G E
Sbjct: 642 VGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETE 701
Query: 649 EAYKLIKTMPSNMKKVDA--WSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSN 706
+A +LI+ MP K DA SL+ +C + E+ + +++LL EP + +YV +SN
Sbjct: 702 KALRLIEEMPF---KPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISN 758
Query: 707 IYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDE--VHKFLAGDASHPQSKELHEYL 764
Y+ G WD+ + +R+ MK G++K+PGCSWI+ E VH F+A D +H + E+ L
Sbjct: 759 AYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMML 818
Query: 765 ENLLQRM 771
LL M
Sbjct: 819 ALLLYDM 825
Score = 244 bits (624), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 165/557 (29%), Positives = 272/557 (48%), Gaps = 29/557 (5%)
Query: 179 IAHACSNLRDGLSLGKQVHAYTFRNGDW---RTFTNNALVTMYAKLGRIDEAKALFGLFD 235
I C RD LS GKQ+HA +NGD+ + LV YAK ++ A+ LF
Sbjct: 76 ILQGCVYERD-LSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLR 134
Query: 236 DKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKE 295
+++ SW +I + E AL+ ML++ + PD + + AC L+ R G+
Sbjct: 135 VRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRG 194
Query: 296 IHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNE 355
+HGY ++ + L D FV S+L DMY C D VFD I R WNA++ GY +N
Sbjct: 195 VHGYVVK-SGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNG 253
Query: 356 FDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQ 415
++EAI+LF +M + P T+S+ L A + + H + G E D +
Sbjct: 254 KNEEAIRLFSDM-RKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILG 312
Query: 416 NALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDD 475
+L++ Y ++G IE ++ +F M +D+V+WN +I+GYV G +DA+ + M+ +
Sbjct: 313 TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEK-- 370
Query: 476 EYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYA 535
LK + VTL T++ E+ Y ++ +DI + S ++DMYA
Sbjct: 371 ---------LKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYA 421
Query: 536 KCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNE 595
KCG + ++ VFD +++I WN L+ AY G EAL LF M E + PN
Sbjct: 422 KCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG-----VPPNV 476
Query: 596 VTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIK 655
+T+ I + +G VDE ++F M+++ GI P+ + +++ + ++G EEA ++
Sbjct: 477 ITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQNGCSEEAILFLR 535
Query: 656 TMPSNMKKVDAWS--SLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGL 713
M + + +A+S L AC +L +G ++ H L+S S +
Sbjct: 536 KMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYII----RNLQHSSLVSIETSLVDM 591
Query: 714 WDQAMDIRKKMKEMGVR 730
+ + DI K K G +
Sbjct: 592 YAKCGDINKAEKVFGSK 608
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 236/492 (47%), Gaps = 34/492 (6%)
Query: 246 ISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTD 305
+SSL +N +EAL + M +R L C + L TGK+IH L+N D
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 306 LI-DNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLF 364
N ++ + LV Y C + +F + R V W A+I R + A+ F
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 365 IEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSR 424
+EM+ E++ P++ + ++ AC K G+HGYVVK G E +V ++L DMY +
Sbjct: 162 VEML-ENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGK 220
Query: 425 MGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIP 484
G ++ + +F + R+ V+WN ++ GYV G++++A+ L DM++
Sbjct: 221 CGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQ-----------G 269
Query: 485 LKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSR 544
++P VT+ T L + HA A+ + D +G++L++ Y K G + +
Sbjct: 270 VEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAE 329
Query: 545 IVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAA 604
+VFD+M ++V+TWN++I Y G E+A+ + + M EK ++ + VT + +A
Sbjct: 330 MVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEK-----LKYDCVTLATLMSA 384
Query: 605 CSHSGMVDEGLNLFHTMKA---NHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNM 661
+ + E L L ++ H E + ++D+ + G + +A K+ +
Sbjct: 385 AART----ENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVE-- 438
Query: 662 KKVDAWSSLLGACKIHQNLEVGE----IAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQA 717
K + W++LL A ++ GE QL + PNV + +++ ++ + G D+A
Sbjct: 439 KDLILWNTLLAA--YAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRN-GQVDEA 495
Query: 718 MDIRKKMKEMGV 729
D+ +M+ G+
Sbjct: 496 KDMFLQMQSSGI 507
Score = 160 bits (405), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 146/594 (24%), Positives = 258/594 (43%), Gaps = 56/594 (9%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+ AW + Q+ +AI +++M GV P L A+A + + GKQ
Sbjct: 237 RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQS 296
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
H G ++ + SL+N Y K G + A VFDR+ ++D V+WN +I+ +
Sbjct: 297 HAIAIVNGMELDNI-LGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGL 355
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNN 212
+ TL ++ A + + L LGK+V Y R+ + +
Sbjct: 356 VEDAIYMCQLMRLEKLKYDCVTLATLMSAAAR-TENLKLGKEVQCYCIRHSFESDIVLAS 414
Query: 213 ALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRP 272
++ MYAK G I +AK +F +KDL+ WNT++++ +++ EAL Y M GV P
Sbjct: 415 TVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPP 474
Query: 273 DGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWV 332
+ +T + L +LR G+ +D + DM+ + +
Sbjct: 475 NVITWNLII-----LSLLRNGQ------------VDEA------KDMFLQMQSS------ 505
Query: 333 FDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKA 392
GI+ ++ W M+ G +N +EAI LF+ + ES PN+ +++ L AC +
Sbjct: 506 --GIIPNLIS-WTTMMNGMVQNGCSEEAI-LFLRKMQESGLRPNAFSITVALSACAHLAS 561
Query: 393 FLDKEGIHGYVVKRGFEKDKYV--QNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMI 450
IHGY++ R + V + +L+DMY++ G I ++ +FGS ++ N MI
Sbjct: 562 LHIGRTIHGYII-RNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMI 620
Query: 451 TGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXE 510
+ Y + G +A+ L Y E + LKP+++T+ VL C E
Sbjct: 621 SAYALYGNLKEAIAL-----------YRSLEGVGLKPDNITITNVLSACNHAGDINQAIE 669
Query: 511 IHAYAL-KQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHG 569
I + K+ + + ++D+ A G + + ++MP + ++A
Sbjct: 670 IFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQ 729
Query: 570 KGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKA 623
+ E ++ R + E + N Y+ I A + G DE + + MKA
Sbjct: 730 RKTELVDYLSRKLLESEPE-----NSGNYVTISNAYAVEGSWDEVVKMREMMKA 778
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 176/404 (43%), Gaps = 34/404 (8%)
Query: 348 IAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRG 407
++ +N EA+ L EM + + +L CV + + IH ++K G
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFR-NLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNG 100
Query: 408 --FEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNL 465
+ +++Y++ L+ Y++ +EI++ +F + R++ SW +I G + AL
Sbjct: 101 DFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMG 160
Query: 466 LHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIA 525
+M + + P++ + V C +H Y +K L +
Sbjct: 161 FVEMLENE-----------IFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVF 209
Query: 526 VGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEK 585
V S+L DMY KCG L+ + VFD++P RN + WN L++ Y +GK EEA+ LF M
Sbjct: 210 VASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDM---- 265
Query: 586 DSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSG 645
+ + P VT +A ++ G V+EG H + +G+E + L++ + G
Sbjct: 266 -RKQGVEPTRVTVSTCLSASANMGGVEEG-KQSHAIAIVNGMELDNILGTSLLNFYCKVG 323
Query: 646 RVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLS 705
+E A + M K V W+ ++ + Q L I QL+ LE + V L+
Sbjct: 324 LIEYAEMVFDRMFE--KDVVTWNLIISG-YVQQGLVEDAIYMCQLMRLE-KLKYDCVTLA 379
Query: 706 NIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLA 749
+ S+A + + + + KE C I H E LA
Sbjct: 380 TLMSAAA----------RTENLKLGKEVQCYCIRHSFESDIVLA 413
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 335 bits (858), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 226/743 (30%), Positives = 356/743 (47%), Gaps = 114/743 (15%)
Query: 49 SSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVA 108
SSSFLQA+ + +L++ + N L +Q +G + K G+ S+ V
Sbjct: 14 SSSFLQAMEVDCRRY----------YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVI 63
Query: 109 VANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXN 168
VAN L+ MY + G + A ++FD + DR++ SWN+MI
Sbjct: 64 VANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEG----------------YMNSG 107
Query: 169 VDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAK 228
TS + RDG S W N +V+ +AK G + A+
Sbjct: 108 EKGTSLRFFDMMPE----RDGYS--------------W-----NVVVSGFAKAGELSVAR 144
Query: 229 ALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLE 288
LF +KD+V+ N+++ N EEAL + D +TL + L AC+ LE
Sbjct: 145 RLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELE 201
Query: 289 MLRTGKEIHGYAL---------RNTDLI-----------------------DNSFVGSAL 316
L+ GK+IH L N+ L+ D+S SAL
Sbjct: 202 ALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSL--SAL 259
Query: 317 VDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPN 376
+ Y NC + ++ R +FD R V +WN+MI+GY N EA+ LF EM E+ +
Sbjct: 260 ISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNET--RED 317
Query: 377 STTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFG 436
S TL++++ AC+ + +H + K G D V + L+DMYS+ G + +F
Sbjct: 318 SRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFS 377
Query: 437 SMDRRDIVSWNTMITGYVVCGRHDDALNLLHDM----------------QRGQDDE---- 476
++ D + N+MI Y CGR DDA + + Q G E
Sbjct: 378 EVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEY 437
Query: 477 YEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAK 536
+ + L + V+L +V+ C ++ A A L +D V S+LID+Y K
Sbjct: 438 FHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCK 497
Query: 537 CGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEV 596
CG + R VFD M + + WN +I Y +G+G EA++LF++M S IRP ++
Sbjct: 498 CGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKM-----SVAGIRPTQI 552
Query: 597 TYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKT 656
T++ + AC++ G+V+EG LF +MK +HG P +H++C+VDLL R+G VEEA L++
Sbjct: 553 TFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEE 612
Query: 657 MPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQ 716
MP ++ WSS+L C + +G+ AA++++ LEP + YV LS I++++G W+
Sbjct: 613 MPFDVDG-SMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWES 671
Query: 717 AMDIRKKMKEMGVRKEPGCSWIE 739
+ +RK M+E V K PG SW +
Sbjct: 672 SALVRKLMRENNVTKNPGSSWTD 694
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 1/151 (0%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
+S +W +Q+ ++ + + M +P D + +V+ A A ++ L LG+Q+
Sbjct: 413 KSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQV 472
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
G S V V++SL+++Y KCG + VFD + D V WNSMI+
Sbjct: 473 FARATIVGLDSDQV-VSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQ 531
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACS 184
+ PT T + + AC+
Sbjct: 532 GFEAIDLFKKMSVAGIRPTQITFMVVLTACN 562
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 332 bits (850), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 180/581 (30%), Positives = 324/581 (55%), Gaps = 33/581 (5%)
Query: 214 LVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPD 273
L+ Y + G ++EA++LF D+D+V+W +I+ + ++ A + M++ G P+
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPN 110
Query: 274 GVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCK-KADKGRWV 332
TL+S L +C ++++L G +HG ++ + + +V +A+++MY C + +
Sbjct: 111 EFTLSSVLKSCRNMKVLAYGALVHGVVVK-LGMEGSLYVDNAMMNMYATCSVTMEAACLI 169
Query: 333 FDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYE-SDFTPNSTTLSSLLPACVRCK 391
F I + W +I G+ +K++ +M+ E ++ TP T++ VR
Sbjct: 170 FRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA------VRAS 223
Query: 392 AFLDK----EGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWN 447
A +D + IH V+KRGF+ + V N+++D+Y R G + +K F M+ +D+++WN
Sbjct: 224 ASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWN 283
Query: 448 TMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXX 507
T+I+ R D + LL ++ ES PN T +++ C
Sbjct: 284 TLISE---LERSDSSEALLM---------FQRFESQGFVPNCYTFTSLVAACANIAALNC 331
Query: 508 XXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQM-PTRNVITWNVLIMAYG 566
++H ++ ++ + +ALIDMYAKCG + S+ VF ++ RN+++W +++ YG
Sbjct: 332 GQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYG 391
Query: 567 MHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHG 626
HG G EA+ELF +MV+ IRP+ + ++A+ +AC H+G+V++GL F+ M++ +G
Sbjct: 392 SHGYGAEAVELFDKMVSSG-----IRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYG 446
Query: 627 IEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQ-NLEVGEI 685
I P D Y C+VDLLGR+G++ EAY+L++ MP + W ++LGACK H+ N + +
Sbjct: 447 INPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDE-STWGAILGACKAHKHNGLISRL 505
Query: 686 AAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVH 745
AA++++ L+P + YV+LS IY++ G W +RK M+ MG +KE G SWI ++V
Sbjct: 506 AARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVF 565
Query: 746 KFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHD 786
F D P + ++ L L++ R+ GYVP+ +++D
Sbjct: 566 SFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELDSLVND 606
Score = 171 bits (432), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 192/401 (47%), Gaps = 13/401 (3%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R AW + A S+ +A + MV G P+ F +VLK+ + L G +
Sbjct: 74 RDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALV 133
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCG-DLAGAHHVFDRISDRDHVSWNSMIAAACRFX 152
HG V K G S+ V N+++NMY C + A +F I ++ V+W ++I
Sbjct: 134 HGVVVKLGMEG-SLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLG 192
Query: 153 XXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTF-TN 211
N + T + ++IA S D ++ GKQ+HA + G
Sbjct: 193 DGIGGLKMYKQMLLENAEVTPYC-ITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVM 251
Query: 212 NALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVR 271
N+++ +Y + G + EAK F +DKDL++WNT+IS L ++D EALL G
Sbjct: 252 NSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDS-SEALLMFQRFESQGFV 310
Query: 272 PDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRW 331
P+ T S + AC+++ L G+++HG R N + +AL+DMY C +
Sbjct: 311 PNCYTFTSLVAACANIAALNCGQQLHGRIFRR-GFNKNVELANALIDMYAKCGNIPDSQR 369
Query: 332 VFDGIL-RRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRC 390
VF I+ RR + W +M+ GY + + EA++LF +MV S P+ ++L AC
Sbjct: 370 VFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMV-SSGIRPDRIVFMAVLSACRH- 427
Query: 391 KAFLDKEGIHGYVV---KRGFEKDKYVQNALMDMYSRMGRI 428
A L ++G+ + V + G D+ + N ++D+ R G+I
Sbjct: 428 -AGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKI 467
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 137/512 (26%), Positives = 229/512 (44%), Gaps = 65/512 (12%)
Query: 109 VANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXN 168
+A +L+ Y + G + A +FD + DRD V+W +MI
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 169 VDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEA 227
P FTL S+ +C N++ L+ G VH + G + + +NA++ MYA EA
Sbjct: 107 TSPNEFTLSSVLKSCRNMKV-LAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 228 KALFGLFDD---KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPAC 284
L +F D K+ V+W T+I+ + L ML + A+ A
Sbjct: 166 ACL--IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRAS 223
Query: 285 SHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVW 344
+ ++ + TGK+IH ++ N V ++++D+YC C + + F + + + W
Sbjct: 224 ASIDSVTTGKQIHASVIKR-GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITW 282
Query: 345 NAMIAGYARNEFDDEAIKLFIEMVYESD-FTPNSTTLSSLLPACVRCKAFLDKEGIHGYV 403
N +I+ R++ EA+ +F +ES F PN T +SL+ AC A + +HG +
Sbjct: 283 NTLISELERSD-SSEALLMFQR--FESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRI 339
Query: 404 VKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSM-DRRDIVSWNTMITGYVVCGRHDDA 462
+RGF K+ + NAL+DMY++ G I S+ +FG + DRR++VSW +M+ GY G +A
Sbjct: 340 FRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEA 399
Query: 463 LNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLAT 522
+ L M S ++P+ + M VL C HA +++ L
Sbjct: 400 VELFDKMV-----------SSGIRPDRIVFMAVLSACR-----------HAGLVEKGLKY 437
Query: 523 DIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMV 582
N+ + P R++ +N ++ G GK EA EL RM
Sbjct: 438 -----------------FNVMESEYGINPDRDI--YNCVVDLLGRAGKIGEAYELVERM- 477
Query: 583 AEKDSNKEIRPNEVTYIAIFAAC---SHSGMV 611
+P+E T+ AI AC H+G++
Sbjct: 478 -------PFKPDESTWGAILGACKAHKHNGLI 502
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 330 bits (847), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 211/706 (29%), Positives = 353/706 (50%), Gaps = 61/706 (8%)
Query: 69 PDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAG--- 125
PD ++ + A + D G Q+H + + G S V+N+L+++Y + G+LA
Sbjct: 55 PDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHS-HVSNTLLSLYERLGNLASLKK 113
Query: 126 ----------------------------AHHVFDRISDRDHVS-WNSMIAAACRFXXXXX 156
A VFD++ +RD V+ WN+MI
Sbjct: 114 KFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHET 173
Query: 157 XXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDW-RTFTNNALV 215
V F +I C L GKQVH+ + G + + NAL+
Sbjct: 174 SVELFREMHKLGVRHDKFGFATILSMCD--YGSLDFGKQVHSLVIKAGFFIASSVVNALI 231
Query: 216 TMYAKLGRIDEAKALFGLFDD--KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPD 273
TMY + +A +F D +D V++N VI L+ R +E+LL ML++ +RP
Sbjct: 232 TMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKR-DESLLVFRKMLEASLRPT 290
Query: 274 GVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVF 333
+T S + +CS M G ++HG A++ T + V +A + MY + + VF
Sbjct: 291 DLTFVSVMGSCSCAAM---GHQVHGLAIK-TGYEKYTLVSNATMTMYSSFEDFGAAHKVF 346
Query: 334 DGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAF 393
+ + + + WN MI+ Y + + A+ ++ M + P+ T SLL +
Sbjct: 347 ESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRM-HIIGVKPDEFTFGSLLATSLDLDVL 405
Query: 394 LDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGY 453
E + ++K G + NAL+ YS+ G+IE + +F R++++SWN +I+G+
Sbjct: 406 ---EMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGF 462
Query: 454 VVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHA 513
G + L + + + + P++ TL T+L C + HA
Sbjct: 463 YHNGFPFEGLERFSCLLESE---------VRILPDAYTLSTLLSICVSTSSLMLGSQTHA 513
Query: 514 YALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEE 573
Y L+ + +G+ALI+MY++CG + S VF+QM ++V++WN LI AY HG+GE
Sbjct: 514 YVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGEN 573
Query: 574 ALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDH 633
A+ ++ M +D K I P+ T+ A+ +ACSH+G+V+EGL +F++M HG+ + DH
Sbjct: 574 AVNTYKTM---QDEGKVI-PDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDH 629
Query: 634 YACLVDLLGRSGRVEEAYKLIKTMPSNM-KKVDAWSSLLGACKIHQNLEVGEIAAKQLLV 692
++CLVDLLGR+G ++EA L+K + +VD W +L AC H +L++G++ AK L+
Sbjct: 630 FSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLME 689
Query: 693 LEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWI 738
E + S YV LSNIY+ AG+W +A + R+ + +G K+ GCSW+
Sbjct: 690 KEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWM 735
Score = 200 bits (508), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 167/584 (28%), Positives = 272/584 (46%), Gaps = 45/584 (7%)
Query: 55 AISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLV 114
++ + M GV D F F +L + L+ GKQ+H V K G+ S +V N+L+
Sbjct: 174 SVELFREMHKLGVRHDKFGFATIL-SMCDYGSLDFGKQVHSLVIKAGFFIAS-SVVNALI 231
Query: 115 NMYGKCGDLAGAHHVFDR--ISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPT 172
MY C + A VF+ ++ RD V++N +I F ++ PT
Sbjct: 232 TMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGF-KRDESLLVFRKMLEASLRPT 290
Query: 173 SFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALF 231
T VS+ +CS ++G QVH + G + T +NA +TMY+ A +F
Sbjct: 291 DLTFVSVMGSCS----CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVF 346
Query: 232 GLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLR 291
++KDLV+WNT+ISS +Q + A+ M GV+PD T S L L++L
Sbjct: 347 ESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE 406
Query: 292 TGKE-IHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAG 350
+ I + L + I N AL+ Y + +K +F+ LR+ + WNA+I+G
Sbjct: 407 MVQACIIKFGLSSKIEISN-----ALISAYSKNGQIEKADLLFERSLRKNLISWNAIISG 461
Query: 351 YARNEFDDEAIKLFIEMV-YESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFE 409
+ N F E ++ F ++ E P++ TLS+LL CV + + H YV++ G
Sbjct: 462 FYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQF 521
Query: 410 KDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDM 469
K+ + NAL++MYS+ G I+ S +F M +D+VSWN++I+ Y G ++A+N M
Sbjct: 522 KETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTM 581
Query: 470 QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALK-QKLATDIAVGS 528
Q DE + P++ T VL C EI ++ + ++ S
Sbjct: 582 Q---------DEG-KVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFS 631
Query: 529 ALIDMYAKCGCLN----LSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAE 584
L+D+ + G L+ L +I + +R V W L A HG L+L +MVA+
Sbjct: 632 CLVDLLGRAGHLDEAESLVKISEKTIGSR-VDVWWALFSACAAHGD----LKL-GKMVAK 685
Query: 585 KDSNKEIRPNEVTYIAIFAACSHSGMVDE------GLNLFHTMK 622
KE + + Y+ + + +GM E +N+ MK
Sbjct: 686 LLMEKE-KDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMK 728
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 215/450 (47%), Gaps = 32/450 (7%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+++ + M+ A + P + F +V+ + + +G Q+HG K GY ++ V+N+
Sbjct: 274 ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKYTL-VSNAT 329
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
+ MY D AH VF+ + ++D V+WN+MI++ + V P
Sbjct: 330 MTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDE 389
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFG 232
FT S+ +L D L + V A + G + +NAL++ Y+K G+I++A LF
Sbjct: 390 FTFGSLLATSLDL-DVLEM---VQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFE 445
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVR--PDGVTLASALPACSHLEML 290
K+L+SWN +IS N E L +L+S VR PD TL++ L C L
Sbjct: 446 RSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSL 505
Query: 291 RTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAG 350
G + H Y LR+ + +G+AL++MY C VF+ + + V WN++I+
Sbjct: 506 MLGSQTHAYVLRHGQF-KETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISA 564
Query: 351 YARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGY---VVKRG 407
Y+R+ + A+ + M E P++ T S++L AC A L +EG+ + V G
Sbjct: 565 YSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSAC--SHAGLVEEGLEIFNSMVEFHG 622
Query: 408 FEKDKYVQNALMDMYSRMGR-------IEISKSIFGSMDRRDIVSWNTMITGYVVCGRHD 460
++ + L+D+ R G ++IS+ GS R D+ W + + C H
Sbjct: 623 VIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGS--RVDV--WWALFSA---CAAHG 675
Query: 461 DALNLLHDMQRGQDDEYEDDESIPLKPNSV 490
D L L + + ++ +DD S+ ++ +++
Sbjct: 676 D-LKLGKMVAKLLMEKEKDDPSVYVQLSNI 704
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 191/436 (43%), Gaps = 63/436 (14%)
Query: 270 VRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMY------CNC 323
+RPD +++ A+ HL G ++H YA+R + L+ +S V + L+ +Y +
Sbjct: 53 LRPDQYSVSLAITTARHLRDTIFGGQVHCYAIR-SGLLCHSHVSNTLLSLYERLGNLASL 111
Query: 324 KKA-------DKGRW------------------VFDGILRR-TVAVWNAMIAGYARNEFD 357
KK D W VFD + R VA+WNAMI G + +
Sbjct: 112 KKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYH 171
Query: 358 DEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNA 417
+ +++LF EM ++ + +++L C K+ +H V+K GF V NA
Sbjct: 172 ETSVELFREM-HKLGVRHDKFGFATILSMCDYGSLDFGKQ-VHSLVIKAGFFIASSVVNA 229
Query: 418 LMDMYSRMGRIEISKSIFGSMD--RRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDD 475
L+ MY + + +F D RD V++N +I G R D++L + M
Sbjct: 230 LITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKR-DESLLVFRKMLEA--- 285
Query: 476 EYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYA 535
L+P +T ++V+ C ++H A+K V +A + MY+
Sbjct: 286 --------SLRPTDLTFVSVMGSC---SCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYS 334
Query: 536 KCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNE 595
+ VF+ + ++++TWN +I +Y G+ A+ +++RM ++P+E
Sbjct: 335 SFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRM-----HIIGVKPDE 389
Query: 596 VTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIK 655
T+ ++ A + + + L + G+ + L+ ++G++E+A L +
Sbjct: 390 FTFGSLLA----TSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFE 445
Query: 656 TMPSNMKKVDAWSSLL 671
S K + +W++++
Sbjct: 446 --RSLRKNLISWNAII 459
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 176/423 (41%), Gaps = 94/423 (22%)
Query: 345 NAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVV 404
N + G R+ + A+KLF ++ + P+ ++S + + + +H Y +
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAI 84
Query: 405 KRGFEKDKYVQNALMDMYSRMGR-------------------------------IEISKS 433
+ G +V N L+ +Y R+G IE +
Sbjct: 85 RSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFE 144
Query: 434 IFGSM-DRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTL 492
+F M +R D+ WN MITG G H+ ++ L +M + + ++ +
Sbjct: 145 VFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHK-----------LGVRHDKFGF 193
Query: 493 MTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQ--M 550
T+L C ++H+ +K +V +ALI MY C + + +VF++ +
Sbjct: 194 ATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDV 252
Query: 551 PTRNVITWNVLIMAYGMHG-KGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSG 609
R+ +T+NV+I G+ G K +E+L +FR+M+ +RP ++T++++ +CS +
Sbjct: 253 AVRDQVTFNVVI--DGLAGFKRDESLLVFRKML-----EASLRPTDLTFVSVMGSCSCAA 305
Query: 610 MVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSS 669
M + HG+ + + E Y L+ + M ++
Sbjct: 306 MGHQ----------VHGLAIKTGY---------------EKYTLVSN--ATMTMYSSFED 338
Query: 670 LLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGV 729
A K+ ++LE E ++ + ++S+ Y+ A L AM + K+M +GV
Sbjct: 339 FGAAHKVFESLE------------EKDLVTWNTMISS-YNQAKLGKSAMSVYKRMHIIGV 385
Query: 730 RKE 732
+ +
Sbjct: 386 KPD 388
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 214/698 (30%), Positives = 348/698 (49%), Gaps = 57/698 (8%)
Query: 76 AVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISD 135
A L+ V G+ I HV K G S +V +AN++++MY L+ AH VFD +S+
Sbjct: 10 AGLRHCGKVQAFKRGESIQAHVIKQG-ISQNVFIANNVISMYVDFRLLSDAHKVFDEMSE 68
Query: 136 RDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS-FTLVSIAHACS---------- 184
R+ V+W +M++ + + F ++ AC
Sbjct: 69 RNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGIL 128
Query: 185 --------NLRDGLSLGKQVHAYTFRNGDW-------------RTFTNNALVTMYAKLGR 223
NLR + L V +NG + + N L++ Y K G
Sbjct: 129 VYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGL 188
Query: 224 IDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPA 283
+DEA LF ++VSWN +IS AL FL M + G+ DG L L A
Sbjct: 189 MDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKA 247
Query: 284 CSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDG---ILRRT 340
CS +L GK++H ++ + L + F SAL+DMY NC VF + +
Sbjct: 248 CSFGGLLTMGKQLHCCVVK-SGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSS 306
Query: 341 VAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIH 400
VAVWN+M++G+ NE ++ A+ L ++ +Y+SD +S TLS L C+ +H
Sbjct: 307 VAVWNSMLSGFLINEENEAALWLLLQ-IYQSDLCFDSYTLSGALKICINYVNLRLGLQVH 365
Query: 401 GYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHD 460
VV G+E D V + L+D+++ +G I+ + +F + +DI++++ +I G V G +
Sbjct: 366 SLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNS 425
Query: 461 DALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKL 520
A L ++ + + L + + +L C +IH +K+
Sbjct: 426 LAFYLFRELIK-----------LGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGY 474
Query: 521 ATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRR 580
++ +AL+DMY KCG ++ ++FD M R+V++W +I+ +G +G+ EEA F +
Sbjct: 475 ESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHK 534
Query: 581 MVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDL 640
M+ N I PN+VT++ + +AC HSG+++E + TMK+ +G+EP +HY C+VDL
Sbjct: 535 MI-----NIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDL 589
Query: 641 LGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASH 700
LG++G +EA +LI MP K W+SLL AC H+N + + A++LL P+ S
Sbjct: 590 LGQAGLFQEANELINKMPLEPDKT-IWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSV 648
Query: 701 YVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWI 738
Y LSN Y++ G+WDQ +R+ K++G KE G SWI
Sbjct: 649 YTSLSNAYATLGMWDQLSKVREAAKKLGA-KESGMSWI 685
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 202/437 (46%), Gaps = 16/437 (3%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+A+ M G+ D FA P LKA + L +GKQ+H V K G S+ A++ +L
Sbjct: 221 RALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAIS-AL 279
Query: 114 VNMYGKCGDLAGAHHVF--DRISDRDHVS-WNSMIAAACRFXXXXXXXXXXXXXXXXNVD 170
++MY CG L A VF ++++ V+ WNSM++ ++
Sbjct: 280 IDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLC 339
Query: 171 PTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKA 229
S+TL C N + L LG QVH+ +G + + LV ++A +G I +A
Sbjct: 340 FDSYTLSGALKICINYVN-LRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHK 398
Query: 230 LFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEM 289
LF +KD+++++ +I ++ A +++ G+ D +++ L CS L
Sbjct: 399 LFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLAS 458
Query: 290 LRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIA 349
L GK+IHG ++ +ALVDMY C + D G +FDG+L R V W +I
Sbjct: 459 LGWGKQIHGLCIKK-GYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIV 517
Query: 350 GYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFE 409
G+ +N +EA + F +M+ PN T LL AC R L++ +K +
Sbjct: 518 GFGQNGRVEEAFRYFHKMI-NIGIEPNKVTFLGLLSAC-RHSGLLEEARSTLETMKSEYG 575
Query: 410 KDKYVQN--ALMDMYSRMGRIEISKSIFGSMD-RRDIVSWNTMITGYVVCGRHDDALNLL 466
+ Y+++ ++D+ + G + + + M D W +++T CG H +A L+
Sbjct: 576 LEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTA---CGTHKNA-GLV 631
Query: 467 HDMQRGQDDEYEDDESI 483
+ + DD S+
Sbjct: 632 TVIAEKLLKGFPDDPSV 648
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 181/420 (43%), Gaps = 31/420 (7%)
Query: 277 LASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI 336
+A+ L C ++ + G+ I + ++ + N F+ + ++ MY + + VFD +
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQ-GISQNVFIANNVISMYVDFRLLSDAHKVFDEM 66
Query: 337 LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDK 396
R + W M++GY + ++AI+L+ M+ + N S++L AC
Sbjct: 67 SERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLG 126
Query: 397 EGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVC 456
++ + K D + N+++DMY + GR+ + S F + R SWNT+I+GY
Sbjct: 127 ILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKA 186
Query: 457 GRHDDALNLLHDMQRGQDDEYE------DDESIP-------------LKPNSVTLMTVLP 497
G D+A+ L H M + + D+ P L + L L
Sbjct: 187 GLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLK 246
Query: 498 GCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQ---MPTRN 554
C ++H +K L + SALIDMY+ CG L + VF Q +
Sbjct: 247 ACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSS 306
Query: 555 VITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEG 614
V WN ++ + ++ + E AL L ++ ++ + T C + + G
Sbjct: 307 VAVWNSMLSGFLINEENEAALWLLLQIY-----QSDLCFDSYTLSGALKICINYVNLRLG 361
Query: 615 LNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGAC 674
L + H++ G E + LVDL G +++A+KL +P+ K + A+S L+ C
Sbjct: 362 LQV-HSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPN--KDIIAFSGLIRGC 418
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 323 bits (829), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 203/694 (29%), Positives = 343/694 (49%), Gaps = 45/694 (6%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTS-VAVANS 112
+++ + +M +G D F V+ A + + +L LG+ +HG V K GY+ + V+V NS
Sbjct: 272 KSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNS 331
Query: 113 LVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAA-ACRFXXXXXXXXXXXXXXXXNVDP 171
+++MY KCGD A VF+ + RD +S N+++ A + P
Sbjct: 332 IISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQP 391
Query: 172 TSFTLVSIAHACSNLRDGLSLGKQVHAYTFR-NGDWRTF-TNNALVTMYAKLGRIDEAKA 229
T+VSI C +L G+ VH YT R R N+++ MY K G +A+
Sbjct: 392 DIATVVSITSICGDLSFSRE-GRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAEL 450
Query: 230 LFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQ--SGVRPDGVTLASALPACSHL 287
LF +DLVSWN++IS+ SQN +A ++ S + T+ + L +C
Sbjct: 451 LFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSS 510
Query: 288 EMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAM 347
+ L GK +H + + DL SA + + + D + WN++
Sbjct: 511 DSLIFGKSVHCWLQKLGDLT------SAFLRLETMSETRD-------------LTSWNSV 551
Query: 348 IAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRG 407
I+G A + E+++ F M E + TL + A L HG +K
Sbjct: 552 ISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSL 611
Query: 408 FEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLH 467
E D +QN L+ MY R IE + +FG + ++ SWN +I+
Sbjct: 612 RELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISAL-------------- 657
Query: 468 DMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVG 527
+ + ++ ++ L+PN +T + +L + H + +++ + V
Sbjct: 658 SQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS 717
Query: 528 SALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDS 587
+AL+DMY+ CG L VF ++ WN +I A+G HG GE+A+ELF+ E S
Sbjct: 718 AALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFK----ELSS 773
Query: 588 NKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRV 647
N E+ PN+ ++I++ +ACSHSG +DEGL+ + M+ G++P ++H +VD+LGR+G++
Sbjct: 774 NSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKL 833
Query: 648 EEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNI 707
EAY+ I T +K W +LL AC H + ++G+ A+ L +EP+ AS+Y+ L+N
Sbjct: 834 REAYEFI-TGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANT 892
Query: 708 YSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHR 741
Y G W++A+ +RK +++ ++K PG S I+ R
Sbjct: 893 YVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDVR 926
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 150/631 (23%), Positives = 268/631 (42%), Gaps = 66/631 (10%)
Query: 91 KQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSW--------- 141
+ +H K G +A ++ L+ YG+ G+L + +FD + ++D + W
Sbjct: 107 RSVHCFALKCGLLQ-DLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQ 165
Query: 142 NSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTF 201
N AA + ++ + + ++ CS L H
Sbjct: 166 NGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSML----------HCLAI 215
Query: 202 RNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALL 260
G + NAL+ +YAK + A+ +F + +D+VSWNT+++ N ++L
Sbjct: 216 ETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQ 275
Query: 261 FLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSF-VGSALVDM 319
+ M SG D VT + + ACS +E L G+ +HG +++ + VG++++ M
Sbjct: 276 YFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISM 335
Query: 320 YCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTT 379
Y C + VF+ ++ R V NA++ G+A N +EA + +M P+ T
Sbjct: 336 YSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIAT 395
Query: 380 LSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKY-VQNALMDMYSRMGRIEISKSIFGSM 438
+ S+ C + +HGY V+ + V N+++DMY + G ++ +F +
Sbjct: 396 VVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTT 455
Query: 439 DRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPG 498
RD+VSWN+MI+ + G A NL ++ EY K + T++ +L
Sbjct: 456 THRDLVSWNSMISAFSQNGFTHKAKNLFKEVV----SEYSCS-----KFSLSTVLAILTS 506
Query: 499 CXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMP-TRNVIT 557
C +H + QKL G L + + + M TR++ +
Sbjct: 507 CDSSDSLIFGKSVHCWL--QKL-----------------GDLTSAFLRLETMSETRDLTS 547
Query: 558 WNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNL 617
WN +I G E+L F+ M E +IR + +T + +A + G+V +G
Sbjct: 548 WNSVISGCASSGHHLESLRAFQAMSRE----GKIRHDLITLLGTISASGNLGLVLQG-RC 602
Query: 618 FHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIH 677
FH + E + L+ + GR +E A K+ + + +W+ ++ A +
Sbjct: 603 FHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISD--PNLCSWNCVISA--LS 658
Query: 678 QNLEVGEIAAKQL---LVLEPNVASHYVLLS 705
QN E+ QL L LEPN + LLS
Sbjct: 659 QNKAGREVF--QLFRNLKLEPNEITFVGLLS 687
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%)
Query: 475 DEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMY 534
DE + E+ ++ + + L VL +H +ALK L D+A S L+ Y
Sbjct: 73 DELPERENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFY 132
Query: 535 AKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMV 582
+ G L S +FD++ ++VI WN +I A +G+ A+ LF M+
Sbjct: 133 GRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMI 180
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 322 bits (826), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 203/668 (30%), Positives = 348/668 (52%), Gaps = 86/668 (12%)
Query: 194 KQVHA------YTFRNGDWRTFTNNALVTMYAKLGRIDEAKALF---GLFDDKDLVSWNT 244
+QVHA + FR+G + N L+++YA+LG + +A+ +F L DL WN+
Sbjct: 73 RQVHAQVLLSDFIFRSG---SLAAN-LISVYARLGLLLDARNVFETVSLVLLSDLRLWNS 128
Query: 245 VISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNT 304
++ + + +E AL M Q G+ DG L L AC +L + H ++
Sbjct: 129 ILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQ-I 187
Query: 305 DLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDE-AIKL 363
L +N V + L+ +Y + +F + R WN MI G+++ E+D E A+K+
Sbjct: 188 GLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQ-EYDCESAVKI 246
Query: 364 FIEMVYESDFTPNSTTLSSLLPACVRCKAFLD---------------------------- 395
F E + +F P+ T +S+L +C F D
Sbjct: 247 F-EWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCA 305
Query: 396 -------KEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNT 448
E +HGYV+K GFE+ +NAL+ +Y + G+++ ++ +F + + I SWN+
Sbjct: 306 ELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNS 365
Query: 449 MITGYVVCGRHDDALNLLHDMQ--------------------------RGQD--DEYEDD 480
+IT +V G+ D+AL+L +++ RG D + +
Sbjct: 366 LITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
Query: 481 ESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCL 540
+ + NSVT+ +L C EIH + ++ ++ +I V +AL++MYAKCG L
Sbjct: 426 QFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLL 485
Query: 541 NLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIA 600
+ +VF+ + +++I+WN +I YGMHG E+AL +F RM++ P+ + +A
Sbjct: 486 SEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSG-----FHPDGIALVA 540
Query: 601 IFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSN 660
+ +ACSH+G+V++G +F++M G+EP +HYAC+VDLLGR G ++EA +++K MP
Sbjct: 541 VLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPME 600
Query: 661 MKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDI 720
KV +LL +C++H+N+++ E A QL VLEP Y+LLSNIYS+ G W+++ ++
Sbjct: 601 -PKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANV 659
Query: 721 RKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDT 780
R K+ ++K G SWIE + + +KF +G + + ++ LE+L+ M K+G D
Sbjct: 660 RALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTHDG 719
Query: 781 SCVLHDVD 788
+ D+D
Sbjct: 720 NNYEDDLD 727
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 190/475 (40%), Gaps = 78/475 (16%)
Query: 39 WIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVF 98
W L+ + A+ Y M G+ D + P +L+A + L + H V
Sbjct: 126 WNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVI 185
Query: 99 KFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXX 158
+ G ++ V N L+ +Y K G + A+++F + R+ +SWN MI +
Sbjct: 186 QIGLKE-NLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAV 244
Query: 159 XXXXXXXXXNVDPTSFTLVSI--AHA-CSNLRD--------------------------- 188
P T S+ H+ C D
Sbjct: 245 KIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVC 304
Query: 189 ----GLSLGKQVHAYTFRNGDWRTF-TNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWN 243
LS+ ++VH Y + G + NAL+ +Y K G++ +A+ LF +K + SWN
Sbjct: 305 AELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWN 364
Query: 244 TVISSLSQNDRFEEALL---------------------------------------FLYH 264
++I+S + +EAL +
Sbjct: 365 SLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQ 424
Query: 265 MLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCK 324
M S V + VT+ L C+ L L G+EIHG+ +R T + +N V +ALV+MY C
Sbjct: 425 MQFSKVLANSVTICCILSICAELPALNLGREIHGHVIR-TSMSENILVQNALVNMYAKCG 483
Query: 325 KADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLL 384
+G VF+ I + + WN++I GY + F ++A+ +F M+ S F P+ L ++L
Sbjct: 484 LLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMI-SSGFHPDGIALVAVL 542
Query: 385 PACVRCKAFLDKEGIHGYVVKR-GFEKDKYVQNALMDMYSRMGRIEISKSIFGSM 438
AC I + KR G E + ++D+ R+G ++ + I +M
Sbjct: 543 SACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 121/543 (22%), Positives = 210/543 (38%), Gaps = 99/543 (18%)
Query: 91 KQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISD---RDHVSWNSMIAA 147
+Q+H V + S ++A +L+++Y + G L A +VF+ +S D WNS++ A
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKA 132
Query: 148 ACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNL-RDGLSLGKQVHAYTFRNGDW 206
+ + L I AC L R GL + H + G
Sbjct: 133 NVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLC--RAFHTQVIQIGLK 190
Query: 207 RTF-TNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQN------------- 252
N L+T+Y K GR+ +A LF ++ +SWN +I SQ
Sbjct: 191 ENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWM 250
Query: 253 ----------------------DRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEML 290
+FE+ L + + M SG G LA C+ LE L
Sbjct: 251 QREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEAL 310
Query: 291 RTGKEIHGYALRNTDLIDNSFVGS--ALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMI 348
+++HGY ++ ++ S AL+ +Y K +F I + + WN++I
Sbjct: 311 SIAEKVHGYVIKGG---FEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLI 367
Query: 349 AGYARNEFDDEAIKLFIEM--------------------------------------VYE 370
+ DEA+ LF E+ +
Sbjct: 368 TSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQF 427
Query: 371 SDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEI 430
S NS T+ +L C A IHG+V++ ++ VQNAL++MY++ G +
Sbjct: 428 SKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSE 487
Query: 431 SKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSV 490
+F ++ +D++SWN++I GY + G + AL++ M S P+ +
Sbjct: 488 GSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMI-----------SSGFHPDGI 536
Query: 491 TLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVG--SALIDMYAKCGCLNLSRIVFD 548
L+ VL C EI Y++ ++ + + ++D+ + G L + +
Sbjct: 537 ALVAVLSACSHAGLVEKGREIF-YSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVK 595
Query: 549 QMP 551
MP
Sbjct: 596 NMP 598
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 121/299 (40%), Gaps = 42/299 (14%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
W L +Q F + + M +G A A + L++ +++HG+V
Sbjct: 261 TWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYV 320
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDR--------------------- 136
K G+ + N+L+++YGK G + A H+F +I ++
Sbjct: 321 IKGGFEEY-LPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEA 379
Query: 137 ------------------DHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVS 178
+ V+W S+I V S T+
Sbjct: 380 LSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICC 439
Query: 179 IAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDK 237
I C+ L L+LG+++H + R NALV MYAK G + E +F DK
Sbjct: 440 ILSICAEL-PALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDK 498
Query: 238 DLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEI 296
DL+SWN++I + E+AL M+ SG PDG+ L + L ACSH ++ G+EI
Sbjct: 499 DLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREI 557
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 322 bits (825), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 187/552 (33%), Positives = 298/552 (53%), Gaps = 25/552 (4%)
Query: 194 KQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFD--DKDLVSWNTVISSLS 250
+QVHA +G + ++L Y + R+D A + F ++ SWNT++S S
Sbjct: 24 QQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYS 83
Query: 251 QNDR--FEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLID 308
++ + + LL M + D L A+ AC L +L G IHG A++N L
Sbjct: 84 KSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKN-GLDK 142
Query: 309 NSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMV 368
+ +V +LV+MY + + VFD I R +W ++ GY + D E +LF M
Sbjct: 143 DDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLM- 201
Query: 369 YESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGF-EKDKYVQNALMDMYSRMGR 427
++ ++ TL L+ AC A + +HG ++R F ++ Y+Q +++DMY +
Sbjct: 202 RDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRL 261
Query: 428 IEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKP 487
++ ++ +F + R++V W T+I+G+ C R +A +L M R ESI P
Sbjct: 262 LDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLR---------ESIL--P 310
Query: 488 NSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVF 547
N TL +L C +H Y ++ + D ++ IDMYA+CG + ++R VF
Sbjct: 311 NQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVF 370
Query: 548 DQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSH 607
D MP RNVI+W+ +I A+G++G EEAL+ F +M ++ + PN VT++++ +ACSH
Sbjct: 371 DMMPERNVISWSSMINAFGINGLFEEALDCFHKM-----KSQNVVPNSVTFVSLLSACSH 425
Query: 608 SGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAW 667
SG V EG F +M ++G+ P +HYAC+VDLLGR+G + EA I MP AW
Sbjct: 426 SGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVK-PMASAW 484
Query: 668 SSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEM 727
+LL AC+IH+ +++ A++LL +EP +S YVLLSNIY+ AG+W+ +R+KM
Sbjct: 485 GALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIK 544
Query: 728 GVRKEPGCSWIE 739
G RK G S E
Sbjct: 545 GYRKHVGQSATE 556
Score = 194 bits (492), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 133/522 (25%), Positives = 250/522 (47%), Gaps = 35/522 (6%)
Query: 76 AVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRIS- 134
A+L + LN +Q+H V G+ V + +SL N Y + L A F+RI
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGF-EDEVVLGSSLTNAYIQSNRLDFATSSFNRIPC 67
Query: 135 -DRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXX----NVDPTSFTLVSIAHACSNLRDG 189
R+ SWN++++ + VD SF LV AC L
Sbjct: 68 WKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVD--SFNLVFAIKACVGL-GL 124
Query: 190 LSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISS 248
L G +H +NG D + +LV MYA+LG ++ A+ +F ++ V W ++
Sbjct: 125 LENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKG 184
Query: 249 LSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLID 308
+ + E M +G+ D +TL + AC ++ + GK +HG ++R + +
Sbjct: 185 YLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQ 244
Query: 309 NSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMV 368
+ ++ ++++DMY C+ D R +F+ + R V +W +I+G+A+ E EA LF +M+
Sbjct: 245 SDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQML 304
Query: 369 YESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI 428
ES PN TL+++L +C + + +HGY+++ G E D + +DMY+R G I
Sbjct: 305 RES-ILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNI 363
Query: 429 EISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPN 488
++++++F M R+++SW++MI + + G ++AL+ H M+ S + PN
Sbjct: 364 QMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMK-----------SQNVVPN 412
Query: 489 SVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVG------SALIDMYAKCGCLNL 542
SVT +++L C + + + D V + ++D+ + G +
Sbjct: 413 SVTFVSLLSACSHSGNVK-----EGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGE 467
Query: 543 SRIVFDQMPTRNVIT-WNVLIMAYGMHGKGEEALELFRRMVA 583
++ D MP + + + W L+ A +H + + A E+ ++++
Sbjct: 468 AKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLS 509
Score = 166 bits (419), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 183/391 (46%), Gaps = 16/391 (4%)
Query: 70 DNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHV 129
D+F +KA G+ L G IHG K G VA SLV MY + G + A V
Sbjct: 108 DSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDY-VAPSLVEMYAQLGTMESAQKV 166
Query: 130 FDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDG 189
FD I R+ V W ++ ++ + + TL+ + AC N+ G
Sbjct: 167 FDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAG 226
Query: 190 LSLGKQVHAYTFRNG--DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVIS 247
+GK VH + R D + +++ MY K +D A+ LF D+++V W T+IS
Sbjct: 227 -KVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLIS 285
Query: 248 SLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLI 307
++ +R EA ML+ + P+ TLA+ L +CS L LR GK +HGY +RN +
Sbjct: 286 GFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEM 345
Query: 308 DNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEM 367
D + ++ +DMY C R VFD + R V W++MI + N +EA+ F +M
Sbjct: 346 D-AVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKM 404
Query: 368 VYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGY-VVKRGF----EKDKYVQNALMDMY 422
+ PNS T SLL AC KEG + + R + E++ Y ++D+
Sbjct: 405 -KSQNVVPNSVTFVSLLSACSHSGNV--KEGWKQFESMTRDYGVVPEEEHYA--CMVDLL 459
Query: 423 SRMGRIEISKSIFGSMDRRDIVS-WNTMITG 452
R G I +KS +M + + S W +++
Sbjct: 460 GRAGEIGEAKSFIDNMPVKPMASAWGALLSA 490
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 137/293 (46%), Gaps = 7/293 (2%)
Query: 62 MVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCG 121
M G+ D ++KA V +GK +HG + + S + S+++MY KC
Sbjct: 201 MRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCR 260
Query: 122 DLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAH 181
L A +F+ DR+ V W ++I+ + ++ P TL +I
Sbjct: 261 LLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILV 320
Query: 182 ACSNLRDGLSLGKQVHAYTFRNG---DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKD 238
+CS+L L GK VH Y RNG D FT + + MYA+ G I A+ +F + +++
Sbjct: 321 SCSSL-GSLRHGKSVHGYMIRNGIEMDAVNFT--SFIDMYARCGNIQMARTVFDMMPERN 377
Query: 239 LVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHG 298
++SW+++I++ N FEEAL + M V P+ VT S L ACSH ++ G +
Sbjct: 378 VISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFE 437
Query: 299 YALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI-LRRTVAVWNAMIAG 350
R+ ++ + +VD+ + + + D + ++ + W A+++
Sbjct: 438 SMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSA 490
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 9/220 (4%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+ W + A+ ++A + M+ + P+ A+L + + + L GK +
Sbjct: 275 RNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSV 334
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
HG++ + G +V S ++MY +CG++ A VFD + +R+ +SW+SMI A
Sbjct: 335 HGYMIRNGIEMDAVNF-TSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGL 393
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACS---NLRDGLSLGKQVHAYTFRNGDWRTFT 210
NV P S T VS+ ACS N+++G KQ + T G
Sbjct: 394 FEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGW---KQFESMTRDYGVVPEEE 450
Query: 211 NNA-LVTMYAKLGRIDEAKALFGLFDDKDLVS-WNTVISS 248
+ A +V + + G I EAK+ K + S W ++S+
Sbjct: 451 HYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSA 490
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 321 bits (822), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 195/606 (32%), Positives = 316/606 (52%), Gaps = 36/606 (5%)
Query: 194 KQVHAYTFRNG-DWRTFTNNALVTMYA--KLGRIDEAKALFGLFDDKDLVSWNTVISSLS 250
KQ+ A NG F ++ L+ A + +D + + ++ ++ SWN I S
Sbjct: 70 KQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFS 129
Query: 251 QNDRFEEALLFLYHMLQSGV---RPDGVTLASALPACSHLEMLRTGKEIHGYALR-NTDL 306
+++ +E+ L ML+ G RPD T C+ L + G I G+ L+ +L
Sbjct: 130 ESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLEL 189
Query: 307 IDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIE 366
+ S V +A + M+ +C + R VFD R + WN +I GY + ++AI ++
Sbjct: 190 V--SHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKL 247
Query: 367 MVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMG 426
M E P+ T+ L+ +C + + YV + G + NALMDM+S+ G
Sbjct: 248 MESEG-VKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCG 306
Query: 427 RIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQ---------------- 470
I ++ IF ++++R IVSW TMI+GY CG D + L DM+
Sbjct: 307 DIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQ 366
Query: 471 --RGQDDE--YEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAV 526
RGQD +++ ++ KP+ +T++ L C IH Y K L+ ++A+
Sbjct: 367 AKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVAL 426
Query: 527 GSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKD 586
G++L+DMYAKCG ++ + VF + TRN +T+ +I +HG A+ F M+
Sbjct: 427 GTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMI---- 482
Query: 587 SNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGR 646
+ I P+E+T+I + +AC H GM+ G + F MK+ + P HY+ +VDLLGR+G
Sbjct: 483 -DAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGL 541
Query: 647 VEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSN 706
+EEA +L+++MP W +LL C++H N+E+GE AAK+LL L+P+ + YVLL
Sbjct: 542 LEEADRLMESMPMEADAA-VWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDG 600
Query: 707 IYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLEN 766
+Y A +W+ A R+ M E GV K PGCS IE V +F+ D S P+S+++++ L
Sbjct: 601 MYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHC 660
Query: 767 LLQRMR 772
L + MR
Sbjct: 661 LGRHMR 666
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 199/454 (43%), Gaps = 45/454 (9%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGV---PPDNFAFPAVLKAAAGVNDLNLGKQIH 94
+W +R ++S + ++ Y M+ G PD+F +P + K A + +LG I
Sbjct: 120 SWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMIL 179
Query: 95 GHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXX 154
GHV K S V N+ ++M+ CGD+ A VFD RD VSWN +I +
Sbjct: 180 GHVLKLRLELVS-HVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEA 238
Query: 155 XXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFT-NNA 213
V P T++ + +CS L D L+ GK+ + Y NG T NA
Sbjct: 239 EKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGD-LNRGKEFYEYVKENGLRMTIPLVNA 297
Query: 214 LVTMYAKLGRIDEAKALF----------------------------GLFDD---KDLVSW 242
L+ M++K G I EA+ +F LFDD KD+V W
Sbjct: 298 LMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLW 357
Query: 243 NTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALR 302
N +I Q R ++AL M S +PD +T+ L ACS L L G IH Y +
Sbjct: 358 NAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY-IE 416
Query: 303 NTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIK 362
L N +G++LVDMY C + VF GI R + A+I G A + AI
Sbjct: 417 KYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAIS 476
Query: 363 LFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYV-VKRGFEKDKYVQ--NALM 419
F EM+ ++ P+ T LL AC C + + G + +K F + ++ + ++
Sbjct: 477 YFNEMI-DAGIAPDEITFIGLLSAC--CHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMV 533
Query: 420 DMYSRMGRIEISKSIFGSMDRR-DIVSWNTMITG 452
D+ R G +E + + SM D W ++ G
Sbjct: 534 DLLGRAGLLEEADRLMESMPMEADAAVWGALLFG 567
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 195/631 (30%), Positives = 323/631 (51%), Gaps = 55/631 (8%)
Query: 178 SIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDD 236
S+ AC ++R L+ G QVHA+ +G ++ + LVT Y+ +EA+++ D
Sbjct: 48 SLLSACVDVRAFLA-GVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 237 KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEI 296
+ WN +I+S ++N+ FEE + M+ G+RPD T S L AC + G+ +
Sbjct: 107 LHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVV 166
Query: 297 HGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEF 356
HG ++ + + +V +AL+ MY + R +FD + R WNA+I YA
Sbjct: 167 HG-SIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGM 225
Query: 357 DDEAIKLFIEMVYE----SDFTPN-------------------------STTLSSL---- 383
EA +LF +M + S T N T+L +
Sbjct: 226 WSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMII 285
Query: 384 -LPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRD 442
L AC A + IHG + ++ V+N L+ MYS+ + + +F +
Sbjct: 286 GLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENS 345
Query: 443 IVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXX 502
+ +WN++I+GY + ++A +LL +M +PNS+TL ++LP C
Sbjct: 346 LCTWNSIISGYAQLNKSEEASHLLREMLVAG-----------FQPNSITLASILPLCARI 394
Query: 503 XXXXXXXEIHAYALKQKLATDIA-VGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVL 561
E H Y L++K D + ++L+D+YAK G + ++ V D M R+ +T+ L
Sbjct: 395 ANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSL 454
Query: 562 IMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTM 621
I YG G+G AL LF+ M + I+P+ VT +A+ +ACSHS +V EG LF M
Sbjct: 455 IDGYGNQGEGGVALALFKEM-----TRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKM 509
Query: 622 KANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLE 681
+ +GI P H++C+VDL GR+G + +A +I MP W++LL AC IH N +
Sbjct: 510 QCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGA-TWATLLNACHIHGNTQ 568
Query: 682 VGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHR 741
+G+ AA++LL ++P +YVL++N+Y++AG W + ++R M+++GV+K+PGC+WI+
Sbjct: 569 IGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTD 628
Query: 742 DEVHKFLAGDASHPQSKELHEYLENLLQRMR 772
F GD S P++ + L+ L Q M+
Sbjct: 629 SGFSLFSVGDTSSPEACNTYPLLDGLNQLMK 659
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 133/490 (27%), Positives = 221/490 (45%), Gaps = 54/490 (11%)
Query: 36 PSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHG 95
P W + A++ F + I+ Y MV+ G+ PD F +P+VLKA D+ G+ +HG
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 96 HVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMI---------A 146
+ Y S S+ V N+L++MY + ++ A +FDR+ +RD VSWN++I +
Sbjct: 169 SIEVSSYKS-SLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWS 227
Query: 147 AACRFXXXXXXXXXXXXXXXXNVD-----------------------PTSFTLVSIA--- 180
A N+ PTS V++
Sbjct: 228 EAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGL 287
Query: 181 HACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDL 239
ACS L + LGK++H + D N L+TMY+K + A +F ++ L
Sbjct: 288 KACS-LIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSL 346
Query: 240 VSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGY 299
+WN++IS +Q ++ EEA L ML +G +P+ +TLAS LP C+ + L+ GKE H Y
Sbjct: 347 CTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCY 406
Query: 300 ALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDE 359
LR D + + ++LVD+Y K + V D + +R + ++I GY
Sbjct: 407 ILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGV 466
Query: 360 AIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYV-VKRGFEKDKYVQNAL 418
A+ LF EM S P+ T+ ++L AC K + E + + + G + +
Sbjct: 467 ALALFKEMT-RSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCM 525
Query: 419 MDMYSRMGRIEISKSIFGSMDRRDI-VSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEY 477
+D+Y R G + +K I +M + +W T+ LN H Q ++
Sbjct: 526 VDLYGRAGFLAKAKDIIHNMPYKPSGATWATL-------------LNACHIHGNTQIGKW 572
Query: 478 EDDESIPLKP 487
++ + +KP
Sbjct: 573 AAEKLLEMKP 582
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 101/242 (41%), Gaps = 16/242 (6%)
Query: 381 SSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDR 440
+SLL ACV +AFL +H + + G E + L+ YS ++SI + D
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 441 RDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCX 500
+ WN +I Y ++ + Y+ S ++P++ T +VL C
Sbjct: 107 LHPLPWNVLIASYAKNELFEEVI-----------AAYKRMVSKGIRPDAFTYPSVLKACG 155
Query: 501 XXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNV 560
+H + + V +ALI MY + + ++R +FD+M R+ ++WN
Sbjct: 156 ETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNA 215
Query: 561 LIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHT 620
+I Y G EA ELF +M + + +T+ I C +G L L
Sbjct: 216 VINCYASEGMWSEAFELFDKMWFSG-----VEVSVITWNIISGGCLQTGNYVGALGLISR 270
Query: 621 MK 622
M+
Sbjct: 271 MR 272
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 315 bits (808), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 180/550 (32%), Positives = 293/550 (53%), Gaps = 25/550 (4%)
Query: 193 GKQVHAYTFRNG-DWRTFTNNALVTMYAKLGR-IDEAKALFGLFDDKDLVSWNTVISSLS 250
G Q HA+ ++G + N+L+++Y KLG + E + +F KD +SW +++S
Sbjct: 80 GIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYV 139
Query: 251 QNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNS 310
+AL M+ G+ + TL+SA+ ACS L +R G+ HG + + N
Sbjct: 140 TGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITH-GFEWNH 198
Query: 311 FVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYE 370
F+ S L +Y ++ R VFD + V W A+++ +++N+ +EA+ LF M
Sbjct: 199 FISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRG 258
Query: 371 SDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEI 430
P+ +T ++L AC + + IHG ++ G + V+++L+DMY + G +
Sbjct: 259 KGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVRE 318
Query: 431 SKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSV 490
++ +F M +++ VSW+ ++ GY G H+ A+ + +M+ + D Y
Sbjct: 319 ARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME--EKDLY------------- 363
Query: 491 TLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQM 550
TVL C EIH +++ ++ V SALID+Y K GC++ + V+ +M
Sbjct: 364 CFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKM 423
Query: 551 PTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGM 610
RN+ITWN ++ A +G+GEEA+ F MV K I+P+ +++IAI AC H+GM
Sbjct: 424 SIRNMITWNAMLSALAQNGRGEEAVSFFNDMV-----KKGIKPDYISFIAILTACGHTGM 478
Query: 611 VDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSL 670
VDEG N F M ++GI+P ++HY+C++DLLGR+G EEA L++ W L
Sbjct: 479 VDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECR-NDASLWGVL 537
Query: 671 LGACKIHQNL-EVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGV 729
LG C + + V E AK+++ LEP YVLLSN+Y + G A++IRK M GV
Sbjct: 538 LGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGV 597
Query: 730 RKEPGCSWIE 739
K G SWI+
Sbjct: 598 AKTVGQSWID 607
Score = 209 bits (532), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 145/517 (28%), Positives = 246/517 (47%), Gaps = 30/517 (5%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+AI + ++ +P + ++L+ V G Q H HV K G T V NSL
Sbjct: 44 EAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGL-ETDRNVGNSL 102
Query: 114 VNMYGKCG-DLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPT 172
+++Y K G + VFD +D +SW SM++ +D
Sbjct: 103 LSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDAN 162
Query: 173 SFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALF 231
FTL S ACS L + + LG+ H +G +W F ++ L +Y +A+ +F
Sbjct: 163 EFTLSSAVKACSELGE-VRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVF 221
Query: 232 GLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQS-GVRPDGVTLASALPACSHLEML 290
+ D++ W V+S+ S+ND +EEAL Y M + G+ PDG T + L AC +L L
Sbjct: 222 DEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRL 281
Query: 291 RTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAG 350
+ GKEIHG + N + N V S+L+DMY C + R VF+G+ ++ W+A++ G
Sbjct: 282 KQGKEIHGKLITN-GIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGG 340
Query: 351 YARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEK 410
Y +N ++AI++F EM E D ++L AC A + IHG V+RG
Sbjct: 341 YCQNGEHEKAIEIFREM-EEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFG 395
Query: 411 DKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQ 470
+ V++AL+D+Y + G I+ + ++ M R++++WN M++ GR ++A++ +DM
Sbjct: 396 NVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMV 455
Query: 471 RGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVG--- 527
+ +KP+ ++ + +L C E Y + + I G
Sbjct: 456 KK-----------GIKPDYISFIAILTAC---GHTGMVDEGRNYFVLMAKSYGIKPGTEH 501
Query: 528 -SALIDMYAKCGCLNLSRIVFDQMPTRNVIT-WNVLI 562
S +ID+ + G + + ++ RN + W VL+
Sbjct: 502 YSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLL 538
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 189/419 (45%), Gaps = 16/419 (3%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W + ++A+ + MV+ G+ + F + +KA + + ++ LG+ HG V
Sbjct: 130 SWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVV 189
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRF-XXXXX 156
G+ ++++L +YG + A VFD + + D + W ++++A +
Sbjct: 190 ITHGFEWNHF-ISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEA 248
Query: 157 XXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALV 215
+ P T ++ AC NLR L GK++H NG ++L+
Sbjct: 249 LGLFYAMHRGKGLVPDGSTFGTVLTACGNLRR-LKQGKEIHGKLITNGIGSNVVVESSLL 307
Query: 216 TMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGV 275
MY K G + EA+ +F K+ VSW+ ++ QN E+A+ M + D
Sbjct: 308 DMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE----KDLY 363
Query: 276 TLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDG 335
+ L AC+ L +R GKEIHG +R N V SAL+D+Y D V+
Sbjct: 364 CFGTVLKACAGLAAVRLGKEIHGQYVRR-GCFGNVIVESALIDLYGKSGCIDSASRVYSK 422
Query: 336 ILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLD 395
+ R + WNAM++ A+N +EA+ F +MV + P+ + ++L AC +D
Sbjct: 423 MSIRNMITWNAMLSALAQNGRGEEAVSFFNDMV-KKGIKPDYISFIAILTACGH-TGMVD 480
Query: 396 KEGIHGYVV---KRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD-RRDIVSWNTMI 450
EG + +V+ G + + ++D+ R G E ++++ + R D W ++
Sbjct: 481 -EGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLL 538
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 141/316 (44%), Gaps = 20/316 (6%)
Query: 359 EAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNAL 418
EAI++ + + S+ +SLL C + +F+ H +VVK G E D+ V N+L
Sbjct: 44 EAIRI-LNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSL 102
Query: 419 MDMYSRMGR-IEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEY 477
+ +Y ++G + ++ +F +D +SW +M++GYV H AL + +M
Sbjct: 103 LSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMV------- 155
Query: 478 EDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKC 537
S L N TL + + C H + + + S L +Y
Sbjct: 156 ----SFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVN 211
Query: 538 GCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVT 597
+R VFD+MP +VI W ++ A+ + EEAL LF M K + P+ T
Sbjct: 212 REPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAM----HRGKGLVPDGST 267
Query: 598 YIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTM 657
+ + AC + + +G + H +GI + + L+D+ G+ G V EA ++ M
Sbjct: 268 FGTVLTACGNLRRLKQGKEI-HGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGM 326
Query: 658 PSNMKKVDAWSSLLGA 673
K +WS+LLG
Sbjct: 327 SK--KNSVSWSALLGG 340
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 315 bits (808), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 189/577 (32%), Positives = 316/577 (54%), Gaps = 25/577 (4%)
Query: 176 LVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLF 234
L S+ AC+ ++ LG Q+H + G D T +N+L++MYAK R + +F
Sbjct: 49 LPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEM 108
Query: 235 DDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHL-EMLRTG 293
+D VS+ ++I+S Q+ EA+ + M G P +AS L C+ + +
Sbjct: 109 LHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVA 168
Query: 294 KEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYAR 353
+ H L + + ++ + +ALVDMY VFD + + W AMI+G
Sbjct: 169 RMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVA 228
Query: 354 NEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCK--AFLDKEGIHGYVVKRGFEKD 411
N+ + + LF M E + PN TL S+LPACV + L KE IHG+ + G D
Sbjct: 229 NQNYEMGVDLFRAMQRE-NLRPNRVTLLSVLPACVELNYGSSLVKE-IHGFSFRHGCHAD 286
Query: 412 KYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQR 471
+ + A M MY R G + +S+ +F + RD+V W++MI+GY G + +NLL+ M++
Sbjct: 287 ERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRK 346
Query: 472 GQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALI 531
E I + NSVTL+ ++ C +H+ LK + I +G+ALI
Sbjct: 347 ---------EGI--EANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALI 395
Query: 532 DMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEI 591
DMYAKCG L+ +R VF ++ +++++W+ +I AYG+HG G EALE+F+ M+ E+
Sbjct: 396 DMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMI---KGGHEV 452
Query: 592 RPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAY 651
+++ ++AI +AC+H+G+V+E +F T + + + +HYAC ++LLGR G++++A+
Sbjct: 453 --DDMAFLAILSACNHAGLVEEAQTIF-TQAGKYHMPVTLEHYACYINLLGRFGKIDDAF 509
Query: 652 KLIKTMPSNMKKVDAWSSLLGACKIHQNLEV-GEIAAKQLLVLEPNVASHYVLLSNIYSS 710
++ MP WSSLL AC+ H L+V G+I A +L+ EP+ ++YVLLS I++
Sbjct: 510 EVTINMPMK-PSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTE 568
Query: 711 AGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKF 747
+G + A ++R+ M+ + K G S IE ++ +
Sbjct: 569 SGNYHAAEEVRRVMQRRKLNKCYGFSKIEPELQIEDY 605
Score = 183 bits (465), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 139/505 (27%), Positives = 225/505 (44%), Gaps = 25/505 (4%)
Query: 74 FPAVLKAAAGVND-LNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDR 132
P+V+KA A + LG Q+H K G A V+NSL++MY K VFD
Sbjct: 49 LPSVIKACAFQQEPFLLGAQLHCLCLKAG-ADCDTVVSNSLISMYAKFSRKYAVRKVFDE 107
Query: 133 ISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSL 192
+ RD VS+ S+I + C+ P S + S+ C+ + +
Sbjct: 108 MLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKV 167
Query: 193 GKQVHAYTFRNGDWR--TFTNNALVTMYAKLGRIDEAKALFGLFDD---KDLVSWNTVIS 247
+ HA + + + ALV MY K D+ A F +FD K+ VSW +IS
Sbjct: 168 ARMFHALVLVDERMQESVLLSTALVDMYLKF---DDHAAAFHVFDQMEVKNEVSWTAMIS 224
Query: 248 SLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRT-GKEIHGYALRNTDL 306
N +E + M + +RP+ VTL S LPAC L + KEIHG++ R+
Sbjct: 225 GCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCH 284
Query: 307 IDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIE 366
D +A + MYC C R +F+ R V +W++MI+GYA E + L +
Sbjct: 285 ADERLT-AAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQ 343
Query: 367 MVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMG 426
M E NS TL +++ AC +H ++K GF + NAL+DMY++ G
Sbjct: 344 MRKEG-IEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCG 402
Query: 427 RIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLK 486
+ ++ +F + +D+VSW++MI Y + G +AL + M +G +E D+
Sbjct: 403 SLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGG---HEVDD----- 454
Query: 487 PNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIV 546
+ + +L C I A K + + + I++ + G ++ + V
Sbjct: 455 ---MAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEV 511
Query: 547 FDQMPTR-NVITWNVLIMAYGMHGK 570
MP + + W+ L+ A HG+
Sbjct: 512 TINMPMKPSARIWSSLLSACETHGR 536
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 142/327 (43%), Gaps = 21/327 (6%)
Query: 348 IAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACV-RCKAFLDKEGIHGYVVKR 406
+ G ++F DEA++L+ ++ + L S++ AC + + FL +H +K
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKA 76
Query: 407 GFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLL 466
G + D V N+L+ MY++ R + +F M RD VS+ ++I G +A+ L+
Sbjct: 77 GADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLI 136
Query: 467 HDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEI-HAYAL-KQKLATDI 524
+M P S + ++L C + HA L +++ +
Sbjct: 137 KEMY-----------FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESV 185
Query: 525 AVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAE 584
+ +AL+DMY K + VFDQM +N ++W +I + E ++LFR M E
Sbjct: 186 LLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRE 245
Query: 585 KDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRS 644
+RPN VT +++ AC + H HG A + + R
Sbjct: 246 N-----LRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRC 300
Query: 645 GRVEEAYKLIKTMPSNMKKVDAWSSLL 671
G V + L +T S ++ V WSS++
Sbjct: 301 GNVSLSRVLFET--SKVRDVVMWSSMI 325
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R W + A++ + ++ M G+ ++ A++ A L+ +
Sbjct: 316 RDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTV 375
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAA 147
H + K G+ S + + N+L++MY KCG L+ A VF ++++D VSW+SMI A
Sbjct: 376 HSQILKCGFMS-HILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINA 428
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 313 bits (801), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 179/548 (32%), Positives = 292/548 (53%), Gaps = 23/548 (4%)
Query: 196 VHAYTFRNGDWRTFT-NNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDR 254
+H + NG + L+ +Y K G + A+ LF +D+VSW +IS S+
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 255 FEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGS 314
+ALL M + V+ + T S L +C L L+ G +IHG ++ + N V S
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHG-SVEKGNCAGNLIVRS 152
Query: 315 ALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFT 374
AL+ +Y C K ++ R FD + R + WNAMI GY N D + LF M+ E
Sbjct: 153 ALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGK-K 211
Query: 375 PNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSI 434
P+ T SLL A + K +HG +K GF + + +L++ Y + G + + +
Sbjct: 212 PDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKL 271
Query: 435 FGSMDRRDIVSWNTMITGYVVCGR-HDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLM 493
+RD++S +ITG+ DA ++ DM R + K + V +
Sbjct: 272 HEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIR-----------MKTKMDEVVVS 320
Query: 494 TVLPGCXXXXXXXXXXEIHAYALKQ-KLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPT 552
++L C +IH +ALK ++ D+A+G++LIDMYAK G + + + F++M
Sbjct: 321 SMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKE 380
Query: 553 RNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVD 612
++V +W LI YG HG E+A++L+ RM E+ I+PN+VT++++ +ACSH+G +
Sbjct: 381 KDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHER-----IKPNDVTFLSLLSACSHTGQTE 435
Query: 613 EGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMK-KVDAWSSLL 671
G ++ TM HGIE +H +C++D+L RSG +EEAY LI++ + W + L
Sbjct: 436 LGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFL 495
Query: 672 GACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMG-VR 730
AC+ H N+++ ++AA QLL +EP +Y+ L+++Y++ G WD A++ RK MKE G
Sbjct: 496 DACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCN 555
Query: 731 KEPGCSWI 738
K PG S +
Sbjct: 556 KAPGYSLV 563
Score = 173 bits (439), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 150/568 (26%), Positives = 261/568 (45%), Gaps = 33/568 (5%)
Query: 67 VPPDNFAF-PAV-LKAAAGVNDLNLGKQ---IHGHVFKFGYASTSVAVANSLVNMYGKCG 121
V +N+ P++ LKA + N+ KQ IHG+ G+ S ++ + + L+++Y K G
Sbjct: 3 VVSENYLLSPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCS-NLQLKDMLIDLYLKQG 61
Query: 122 DLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAH 181
D+ A +FDRIS RD VSW +MI+ R +V FT S+
Sbjct: 62 DVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLK 121
Query: 182 ACSNLRDGLSLGKQVHAYTFR-NGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLV 240
+C +L L G Q+H + N +AL+++YA+ G+++EA+ F ++DLV
Sbjct: 122 SCKDL-GCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLV 180
Query: 241 SWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYA 300
SWN +I + N + + ML G +PD T S L A ++ L E+HG A
Sbjct: 181 SWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLA 240
Query: 301 LRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYA-RNEFDDE 359
++ +S + +LV+ Y C + +G +R + A+I G++ +N +
Sbjct: 241 IK-LGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSD 299
Query: 360 AIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRG-FEKDKYVQNAL 418
A +F +M+ + +SS+L C + IHG+ +K D + N+L
Sbjct: 300 AFDIFKDMI-RMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSL 358
Query: 419 MDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYE 478
+DMY++ G IE + F M +D+ SW ++I GY G + A++L + M+ +
Sbjct: 359 IDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHER----- 413
Query: 479 DDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYAL-KQKLATDIAVGSALIDMYAKC 537
+KPN VT +++L C +I+ + K + S +IDM A+
Sbjct: 414 ------IKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARS 467
Query: 538 GCLNLSRIVF---DQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPN 594
G L + + + + + + TW + A HG ++L + + S + +P
Sbjct: 468 GYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGN----VQLSKVAATQLLSMEPRKP- 522
Query: 595 EVTYIAIFAACSHSGMVDEGLNLFHTMK 622
V YI + + + +G D LN MK
Sbjct: 523 -VNYINLASVYAANGAWDNALNTRKLMK 549
Score = 142 bits (359), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 196/412 (47%), Gaps = 10/412 (2%)
Query: 55 AISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLV 114
A+ + M V + F + +VLK+ + L G QIHG V K G + ++ V ++L+
Sbjct: 97 ALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEK-GNCAGNLIVRSALL 155
Query: 115 NMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSF 174
++Y +CG + A FD + +RD VSWN+MI P F
Sbjct: 156 SLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCF 215
Query: 175 TLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFT-NNALVTMYAKLGRIDEAKALFGL 233
T S+ A S + L + ++H + G R+ +LV Y K G + A L
Sbjct: 216 TFGSLLRA-SIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEG 274
Query: 234 FDDKDLVSWNTVISSLS-QNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRT 292
+DL+S +I+ S QN+ +A M++ + D V ++S L C+ + +
Sbjct: 275 TKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTI 334
Query: 293 GKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYA 352
G++IHG+AL+++ + + +G++L+DMY + + F+ + + V W ++IAGY
Sbjct: 335 GRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYG 394
Query: 353 RNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVV-KRGFEKD 411
R+ ++AI L+ M +E PN T SLL AC I+ ++ K G E
Sbjct: 395 RHGNFEKAIDLYNRMEHER-IKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAR 453
Query: 412 KYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVV--CGRHDD 461
+ + ++DM +R G +E + ++ S + IVS ++ G + C RH +
Sbjct: 454 EEHLSCIIDMLARSGYLEEAYALIRS--KEGIVSLSSSTWGAFLDACRRHGN 503
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 312 bits (800), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 181/556 (32%), Positives = 300/556 (53%), Gaps = 31/556 (5%)
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRT 292
L L+ +N ++ SL+ F + L + G+ PD TL L + L +
Sbjct: 5 LLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 293 GKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYA 352
G+++HGYA++ L +S+V ++L+ MY + K + VFD + +R V WN +I+ Y
Sbjct: 65 GEKVHGYAVK-AGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 353 RNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDK 412
N ++AI +F M ES+ + T+ S L AC K E I+ +VV FE
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSV 182
Query: 413 YVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHD---- 468
+ NAL+DM+ + G ++ ++++F SM +++ W +M+ GYV GR D+A L
Sbjct: 183 RIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 469 -------MQRGQDDEYEDDESIPL---------KPNSVTLMTVLPGCXXXXXXXXXXEIH 512
M G DE++ L +P++ L+++L GC IH
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIH 302
Query: 513 AYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGE 572
Y + ++ D VG+AL+DMYAKCGC+ + VF ++ R+ +W LI M+G
Sbjct: 303 GYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSG 362
Query: 573 EALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSD 632
AL+L+ M N +R + +T++A+ AC+H G V EG +FH+M H ++P S+
Sbjct: 363 RALDLYYEM-----ENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSE 417
Query: 633 HYACLVDLLGRSGRVEEAYKLIKTM--PSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQL 690
H +CL+DLL R+G ++EA +LI M S+ V + SLL A + + N+++ E A++L
Sbjct: 418 HCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKL 477
Query: 691 LVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAG 750
+E + +S + LL+++Y+SA W+ ++R+KMK++G+RK PGCS IE H+F+ G
Sbjct: 478 EKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVG 537
Query: 751 D--ASHPQSKELHEYL 764
D SHP+ E++ L
Sbjct: 538 DDLLSHPKMDEINSML 553
Score = 180 bits (457), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 204/414 (49%), Gaps = 49/414 (11%)
Query: 171 PTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKA 229
P +FTL + + LR + G++VH Y + G ++ ++ +N+L+ MYA LG+I+
Sbjct: 44 PDNFTLPVVLKSIGRLRKVIE-GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHK 102
Query: 230 LFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQ-SGVRPDGVTLASALPACSHLE 288
+F +D+VSWN +ISS N RFE+A+ M Q S ++ D T+ S L ACS L+
Sbjct: 103 VFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALK 162
Query: 289 MLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMI 348
L G+ I+ + + T+ + +G+ALVDM+C C DK R VFD + + V W +M+
Sbjct: 163 NLEIGERIYRFVV--TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMV 220
Query: 349 AGY--------ARNEFD-----------------------DEAIKLFIEMVYESDFTPNS 377
GY AR F+ DEA++LF + + P++
Sbjct: 221 FGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELF-RCMQTAGIRPDN 279
Query: 378 TTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGS 437
L SLL C + A + IHGY+ + DK V AL+DMY++ G IE + +F
Sbjct: 280 FVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYE 339
Query: 438 MDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLP 497
+ RD SW ++I G + G AL+L ++M E++ ++ +++T + VL
Sbjct: 340 IKERDTASWTSLIYGLAMNGMSGRALDLYYEM-----------ENVGVRLDAITFVAVLT 388
Query: 498 GCXXXXXXXXXXEI-HAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQM 550
C +I H+ + + S LID+ + G L+ + + D+M
Sbjct: 389 ACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 171/379 (45%), Gaps = 40/379 (10%)
Query: 43 LRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGY 102
L+ A SF + ++ + + G+ PDNF P VLK+ + + G+++HG+ K G
Sbjct: 18 LKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGL 77
Query: 103 ASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAAC---RFXXXXXXXX 159
S V+NSL+ MY G + H VFD + RD VSWN +I++ RF
Sbjct: 78 EFDSY-VSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFK 136
Query: 160 XXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYA 219
D T+VS ACS L++ L +G++++ + + NALV M+
Sbjct: 137 RMSQESNLKFDEG--TIVSTLSACSALKN-LEIGERIYRFVVTEFEMSVRIGNALVDMFC 193
Query: 220 K-------------------------------LGRIDEAKALFGLFDDKDLVSWNTVISS 248
K GRIDEA+ LF KD+V W +++
Sbjct: 194 KCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNG 253
Query: 249 LSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLID 308
Q +RF+EAL M +G+RPD L S L C+ L GK IHGY N +D
Sbjct: 254 YVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVD 313
Query: 309 NSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMV 368
VG+ALVDMY C + VF I R A W ++I G A N A+ L+ EM
Sbjct: 314 K-VVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEM- 371
Query: 369 YESDFTPNSTTLSSLLPAC 387
++ T ++L AC
Sbjct: 372 ENVGVRLDAITFVAVLTAC 390
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 8/204 (3%)
Query: 34 RSPSA----WIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNL 89
RSP W + Q + F +A+ + M AG+ PDNF ++L A L
Sbjct: 238 RSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQ 297
Query: 90 GKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAAC 149
GK IHG++ + + V +LV+MY KCG + A VF I +RD SW S+I
Sbjct: 298 GKWIHGYINE-NRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLA 356
Query: 150 RFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQV-HAYTFR-NGDWR 207
V + T V++ AC N ++ G+++ H+ T R N +
Sbjct: 357 MNGMSGRALDLYYEMENVGVRLDAITFVAVLTAC-NHGGFVAEGRKIFHSMTERHNVQPK 415
Query: 208 TFTNNALVTMYAKLGRIDEAKALF 231
+ + L+ + + G +DEA+ L
Sbjct: 416 SEHCSCLIDLLCRAGLLDEAEELI 439
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 311 bits (796), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/523 (34%), Positives = 277/523 (52%), Gaps = 30/523 (5%)
Query: 227 AKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH 286
A+++F D + WN++I S + ++AL+F ML+ G PD T L ACS
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 287 LEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNA 346
L ++ G +HG+ ++ T N +V + L+ MY C + + G VF+ I + V W +
Sbjct: 120 LRDIQFGSCVHGFVVK-TGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGS 178
Query: 347 MIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKR 406
+I+G+ N +AI+ F EM + N T + LL AC RCK + + HG++
Sbjct: 179 LISGFVNNNRFSDAIEAFREM-QSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGL 237
Query: 407 GFEKDKYVQN----------ALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVC 456
GF D Y Q+ +L+DMY++ G + ++ +F M R +VSWN++ITGY
Sbjct: 238 GF--DPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQN 295
Query: 457 GRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYAL 516
G ++AL + DM + + P+ VT ++V+ IHAY
Sbjct: 296 GDAEEALCMFLDML-----------DLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVS 344
Query: 517 KQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALE 576
K D A+ AL++MYAK G ++ F+ + ++ I W V+I+ HG G EAL
Sbjct: 345 KTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALS 404
Query: 577 LFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYAC 636
+F+RM + ++ P+ +TY+ + ACSH G+V+EG F M+ HG+EP+ +HY C
Sbjct: 405 IFQRMQEKGNAT----PDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGC 460
Query: 637 LVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPN 696
+VD+L R+GR EEA +L+KTMP V+ W +LL C IH+NLE+ + + E
Sbjct: 461 MVDILSRAGRFEEAERLVKTMPVK-PNVNIWGALLNGCDIHENLELTDRIRSMVAEPEEL 519
Query: 697 VASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIE 739
+ YVLLSNIY+ AG W IR+ MK V K G S +E
Sbjct: 520 GSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 201/441 (45%), Gaps = 31/441 (7%)
Query: 39 WIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVF 98
W +R + S + +A+ Y M+ G PD F FP VLKA +G+ D+ G +HG V
Sbjct: 75 WNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVV 134
Query: 99 KFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXX 158
K G+ ++ V+ L++MY CG++ VF+ I + V+W S+I+
Sbjct: 135 KTGF-EVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAI 193
Query: 159 XXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG---------DWRTF 209
V +V + AC +D + GK H + G +
Sbjct: 194 EAFREMQSNGVKANETIMVDLLVACGRCKD-IVTGKWFHGFLQGLGFDPYFQSKVGFNVI 252
Query: 210 TNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSG 269
+L+ MYAK G + A+ LF ++ LVSWN++I+ SQN EEAL ML G
Sbjct: 253 LATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLG 312
Query: 270 VRPDGVTL-----ASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCK 324
+ PD VT AS + CS L G+ IH Y + T + ++ + ALV+MY
Sbjct: 313 IAPDKVTFLSVIRASMIQGCSQL-----GQSIHAY-VSKTGFVKDAAIVCALVNMYAKTG 366
Query: 325 KADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLL 384
A+ + F+ + ++ W +I G A + +EA+ +F M + + TP+ T +L
Sbjct: 367 DAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVL 426
Query: 385 PACVRCKAFLDKEGIHGYVVKR---GFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRR 441
AC L +EG + R G E ++D+ SR GR E ++ + +M +
Sbjct: 427 YACSHIG--LVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVK 484
Query: 442 DIVS-WNTMITGYVVCGRHDD 461
V+ W ++ G C H++
Sbjct: 485 PNVNIWGALLNG---CDIHEN 502
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 120/293 (40%), Gaps = 30/293 (10%)
Query: 390 CKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYS---RMGRIEISKSIFGSMDRRDIVSW 446
C++ ++ +HG ++K ++ + L+D + + ++S+F S+D + W
Sbjct: 16 CRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIW 75
Query: 447 NTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXX 506
N+MI GY D AL +M R P+ T VL C
Sbjct: 76 NSMIRGYSNSPNPDKALIFYQEMLRKG-----------YSPDYFTFPYVLKACSGLRDIQ 124
Query: 507 XXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYG 566
+H + +K ++ V + L+ MY CG +N VF+ +P NV+ W LI +
Sbjct: 125 FGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFV 184
Query: 567 MHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHG 626
+ + +A+E FR M + ++ NE + + AC + G FH G
Sbjct: 185 NNNRFSDAIEAFREM-----QSNGVKANETIMVDLLVACGRCKDIVTG-KWFHGFLQGLG 238
Query: 627 IEPSSDH--------YACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLL 671
+P L+D+ + G + A L MP + + +W+S++
Sbjct: 239 FDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPE--RTLVSWNSII 289
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 8/228 (3%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+ +W + +Q+ +A+ + +M+ G+ PD F +V++A+ LG+ I
Sbjct: 280 RTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSI 339
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWN-SMIAAACRFX 152
H +V K G+ + A+ +LVNMY K GD A F+ + +D ++W +I A
Sbjct: 340 HAYVSKTGFVKDA-AIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGH 398
Query: 153 XXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRN--GDWRTFT 210
N P T + + +ACS++ GL Q + R+ G T
Sbjct: 399 GNEALSIFQRMQEKGNATPDGITYLGVLYACSHI--GLVEEGQRYFAEMRDLHGLEPTVE 456
Query: 211 N-NALVTMYAKLGRIDEAKALFGLFDDKDLVS-WNTVISSLSQNDRFE 256
+ +V + ++ GR +EA+ L K V+ W +++ ++ E
Sbjct: 457 HYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLE 504
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 309 bits (792), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 181/554 (32%), Positives = 292/554 (52%), Gaps = 33/554 (5%)
Query: 242 WNTVISSLSQNDRFEEALLFL--YHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGY 299
W+++I S L FL HM ++GV P T L A L R +
Sbjct: 70 WDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKL---RDSNPFQFH 126
Query: 300 A-LRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDD 358
A + L + FV ++L+ Y + D +FDG + V W AMI G+ RN
Sbjct: 127 AHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSAS 186
Query: 359 EAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEK-DKYVQNA 417
EA+ F+EM ++ N T+ S+L A + + +HG ++ G K D ++ ++
Sbjct: 187 EAMVYFVEM-KKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSS 245
Query: 418 LMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEY 477
L+DMY + + ++ +F M R++V+W +I GYV D + + +M +
Sbjct: 246 LVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD---- 301
Query: 478 EDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKC 537
+ PN TL +VL C +H Y +K + + G+ LID+Y KC
Sbjct: 302 -------VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKC 354
Query: 538 GCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVT 597
GCL + +VF+++ +NV TW +I + HG +A +LF M++ + PNEVT
Sbjct: 355 GCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSS-----HVSPNEVT 409
Query: 598 YIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTM 657
++A+ +AC+H G+V+EG LF +MK +EP +DHYAC+VDL GR G +EEA LI+ M
Sbjct: 410 FMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERM 469
Query: 658 PSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQA 717
P V W +L G+C +H++ E+G+ AA +++ L+P+ + Y LL+N+YS + WD+
Sbjct: 470 PMEPTNV-VWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEV 528
Query: 718 MDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHP-QSKELHEYLENLLQRMRKEGY 776
+RK+MK+ V K PG SWIE + ++ +F+A D P +S +L++ L+ + +MR
Sbjct: 529 ARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMR---- 584
Query: 777 VPDTSCVLHDVDDE 790
+PD L DV E
Sbjct: 585 LPDE---LEDVTAE 595
Score = 186 bits (473), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 195/405 (48%), Gaps = 19/405 (4%)
Query: 168 NVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDE 226
V P+ T + A LRD Q HA+ + G D F N+L++ Y+ G D
Sbjct: 99 GVIPSRHTFPPLLKAVFKLRDSNPF--QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDF 156
Query: 227 AKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH 286
A LF +DKD+V+W +I +N EA+++ M ++GV + +T+ S L A
Sbjct: 157 ASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGK 216
Query: 287 LEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNA 346
+E +R G+ +HG L + + F+GS+LVDMY C D + VFD + R V W A
Sbjct: 217 VEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTA 276
Query: 347 MIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKR 406
+IAGY ++ D+ + +F EM+ +SD PN TLSS+L AC A +H Y++K
Sbjct: 277 LIAGYVQSRCFDKGMLVFEEML-KSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKN 335
Query: 407 GFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLL 466
E + L+D+Y + G +E + +F + +++ +W MI G+ G DA +L
Sbjct: 336 SIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLF 395
Query: 467 HDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAV 526
+ M S + PN VT M VL C + ++K + +
Sbjct: 396 YTML-----------SSHVSPNEVTFMAVLSACAHGGLVEEGRRLF-LSMKGRFNMEPKA 443
Query: 527 G--SALIDMYAKCGCLNLSRIVFDQMPTRNV-ITWNVLIMAYGMH 568
+ ++D++ + G L ++ + ++MP + W L + +H
Sbjct: 444 DHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLH 488
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 187/387 (48%), Gaps = 16/387 (4%)
Query: 59 YANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYG 118
Y +M GV P FP +LKA + D N Q H H+ KFG S V NSL++ Y
Sbjct: 92 YRHMRRNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPF-VRNSLISGYS 149
Query: 119 KCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVS 178
G A +FD D+D V+W +MI R V T+VS
Sbjct: 150 SSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVS 209
Query: 179 IAHACSNLRDGLSLGKQVHAYTFRNGDWR--TFTNNALVTMYAKLGRIDEAKALFGLFDD 236
+ A + D + G+ VH G + F ++LV MY K D+A+ +F
Sbjct: 210 VLKAAGKVED-VRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPS 268
Query: 237 KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEI 296
+++V+W +I+ Q+ F++ +L ML+S V P+ TL+S L AC+H+ L G+ +
Sbjct: 269 RNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRV 328
Query: 297 HGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEF 356
H Y ++N+ I N+ G+ L+D+Y C ++ VF+ + + V W AMI G+A + +
Sbjct: 329 HCYMIKNSIEI-NTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGY 387
Query: 357 DDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGF-----EKD 411
+A LF M+ S +PN T ++L AC L +EG ++ +G + D
Sbjct: 388 ARDAFDLFYTML-SSHVSPNEVTFMAVLSACAH--GGLVEEGRRLFLSMKGRFNMEPKAD 444
Query: 412 KYVQNALMDMYSRMGRIEISKSIFGSM 438
Y ++D++ R G +E +K++ M
Sbjct: 445 HYA--CMVDLFGRKGLLEEAKALIERM 469
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 119/244 (48%), Gaps = 2/244 (0%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+A+ + M GV + +VLKAA V D+ G+ +HG + G V + +SL
Sbjct: 187 EAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSL 246
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
V+MYGKC A VFD + R+ V+W ++IA + +V P
Sbjct: 247 VDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNE 306
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFG 232
TL S+ AC+++ L G++VH Y +N + T L+ +Y K G ++EA +F
Sbjct: 307 KTLSSVLSACAHV-GALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFE 365
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRT 292
+K++ +W +I+ + + +A Y ML S V P+ VT + L AC+H ++
Sbjct: 366 RLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEE 425
Query: 293 GKEI 296
G+ +
Sbjct: 426 GRRL 429
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 308 bits (790), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 175/599 (29%), Positives = 320/599 (53%), Gaps = 38/599 (6%)
Query: 209 FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEAL-LFLYHMLQ 267
F + L++ Y + R +A +F ++ S+N ++ + + + + +A LFL +
Sbjct: 58 FLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGS 117
Query: 268 S-----GVRPDGVTLA---SALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDM 319
S RPD ++++ AL C + +++HG+ +R + FVG+ ++
Sbjct: 118 SCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRG-GFDSDVFVGNGMITY 176
Query: 320 YCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTT 379
Y C + R VFD + R V WN+MI+GY+++ ++ K++ M+ SDF PN T
Sbjct: 177 YTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVT 236
Query: 380 LSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD 439
+ S+ AC + + +H +++ + D + NA++ Y++ G ++ ++++F M
Sbjct: 237 VISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMS 296
Query: 440 RRDIVSWNTMITGYVVCGRHDDALNLLHDMQR-------------GQDDEYED-----DE 481
+D V++ +I+GY+ G +A+ L +M+ Q++ +E+ E
Sbjct: 297 EKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFRE 356
Query: 482 SIPL--KPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGC 539
I +PN+VTL ++LP EIHA+A++ +I V +++ID YAK G
Sbjct: 357 MIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGF 416
Query: 540 LNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYI 599
L ++ VFD R++I W +I AY +HG + A LF +M +P++VT
Sbjct: 417 LLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLG-----TKPDDVTLT 471
Query: 600 AIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPS 659
A+ +A +HSG D ++F +M + IEP +HYAC+V +L R+G++ +A + I MP
Sbjct: 472 AVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPI 531
Query: 660 N-MKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAM 718
+ + KV W +LL + +LE+ A +L +EP +Y +++N+Y+ AG W++A
Sbjct: 532 DPIAKV--WGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAE 589
Query: 719 DIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYV 777
+R KMK +G++K PG SWIE + F+A D+S +SKE++E +E L++ M + Y+
Sbjct: 590 MVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEYI 648
Score = 170 bits (430), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 202/446 (45%), Gaps = 55/446 (12%)
Query: 92 QIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACR- 150
Q+H + F + +A+ L++ Y + A HVFD I+ R+ S+N+++ A
Sbjct: 43 QLHARIVVFSIKPDNF-LASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSR 101
Query: 151 --FXXXXXXXXXXXXXXXXNVD---PTSFTLVSIAHACSNLRDGL--SLGKQVHAYTFRN 203
+ + D P S ++ + A S D SL +QVH + R
Sbjct: 102 EMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRG 161
Query: 204 G-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFL 262
G D F N ++T Y K I+ A+ +F ++D+VSWN++IS SQ+ FE+
Sbjct: 162 GFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMY 221
Query: 263 YHMLQ-SGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYC 321
ML S +P+GVT+ S AC L G E+H + N +D S +A++ Y
Sbjct: 222 KAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLC-NAVIGFYA 280
Query: 322 NCKKADKGRWVFD--------------------GILRRTVAV-----------WNAMIAG 350
C D R +FD G+++ +A+ WNAMI+G
Sbjct: 281 KCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISG 340
Query: 351 YARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEK 410
+N +E I F EM+ PN+ TLSSLLP+ + IH + ++ G +
Sbjct: 341 LMQNNHHEEVINSFREMI-RCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADN 399
Query: 411 DKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQ 470
+ YV +++D Y+++G + ++ +F + R +++W +IT Y V G D A +L MQ
Sbjct: 400 NIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQ 459
Query: 471 RGQDDEYEDDESIPLKPNSVTLMTVL 496
+ KP+ VTL VL
Sbjct: 460 -----------CLGTKPDDVTLTAVL 474
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 169/354 (47%), Gaps = 40/354 (11%)
Query: 69 PDNFAFPAVLKAAAGVNDLNLG---KQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAG 125
PD+ + VLKA +G +D LG +Q+HG V + G+ S V V N ++ Y KC ++
Sbjct: 127 PDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDS-DVFVGNGMITYYTKCDNIES 185
Query: 126 AHHVFDRISDRDHVSWNSMIAAACRFXXXXX-XXXXXXXXXXXNVDPTSFTLVSIAHACS 184
A VFD +S+RD VSWNSMI+ + + P T++S+ AC
Sbjct: 186 ARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACG 245
Query: 185 NLRDGLSLGKQVHAYTFRNGDWRTFT-NNALVTMYAKLGRIDEAKALFGLFDDKD----- 238
D L G +VH N + NA++ YAK G +D A+ALF +KD
Sbjct: 246 QSSD-LIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYG 304
Query: 239 --------------------------LVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRP 272
L +WN +IS L QN+ EE + M++ G RP
Sbjct: 305 AIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRP 364
Query: 273 DGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWV 332
+ VTL+S LP+ ++ L+ GKEIH +A+RN +N +V ++++D Y + V
Sbjct: 365 NTVTLSSLLPSLTYSSNLKGGKEIHAFAIRN-GADNNIYVTTSIIDNYAKLGFLLGAQRV 423
Query: 333 FDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPA 386
FD R++ W A+I YA + D A LF +M P+ TL+++L A
Sbjct: 424 FDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGT-KPDDVTLTAVLSA 476
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 35/286 (12%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVA-AGVPPDNFAFPAVLKAAAGVNDLNLGKQ 92
R +W + +QS SF Y M+A + P+ +V +A +DL G +
Sbjct: 196 RDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLE 255
Query: 93 IHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVS------------ 140
+H + + + +++ N+++ Y KCG L A +FD +S++D V+
Sbjct: 256 VHKKMIE-NHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHG 314
Query: 141 -------------------WNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAH 181
WN+MI+ + P + TL S+
Sbjct: 315 LVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLP 374
Query: 182 ACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLV 240
+ + L GK++HA+ RNG D + +++ YAKLG + A+ +F D+ L+
Sbjct: 375 SLT-YSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLI 433
Query: 241 SWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH 286
+W +I++ + + + A M G +PD VTL + L A +H
Sbjct: 434 AWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAH 479
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 308 bits (788), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 226/730 (30%), Positives = 345/730 (47%), Gaps = 122/730 (16%)
Query: 103 ASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXX 162
ST++ NS ++ + + G+L A +F ++S+R VSW +MI+A
Sbjct: 46 TSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAEN----------- 94
Query: 163 XXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAY-TFRNGDWRTFTN-NALVTMYAK 220
GK A+ F R T+ NA++T K
Sbjct: 95 ------------------------------GKMSKAWQVFDEMPVRVTTSYNAMITAMIK 124
Query: 221 LGRIDEAKA--LFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVR---PDGV 275
+ D KA LF +K+ VS+ T+I+ + RF+EA FLY R V
Sbjct: 125 -NKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAE-FLYAETPVKFRDSVASNV 182
Query: 276 TLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDG 335
L+ L A E +R G A++ S++V YC + R +FD
Sbjct: 183 LLSGYLRAGKWNEAVRV---FQGMAVKEV------VSCSSMVHGYCKMGRIVDARSLFDR 233
Query: 336 ILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLD 395
+ R V W AMI GY + F ++ LF+ M E D NS TL+ + AC + +
Sbjct: 234 MTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYRE 293
Query: 396 KEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVV 455
IHG V + E D ++ N+LM MYS++G + +K++FG M +D VSWN++ITG V
Sbjct: 294 GSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQ 353
Query: 456 CGRHDDALNLLH-----------DMQRGQDDEYEDDESIPLK------------------ 486
+ +A L DM +G + E + + L
Sbjct: 354 RKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAF 413
Query: 487 ----------------------PNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDI 524
PNS T +VL +IH +K + D+
Sbjct: 414 VSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDL 473
Query: 525 AVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAE 584
+V ++L+ MY KCG N + +F + N++++N +I Y +G G++AL+LF +
Sbjct: 474 SVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSML--- 530
Query: 585 KDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRS 644
+ S KE PN VT++A+ +AC H G VD G F +MK+++ IEP DHYAC+VDLLGRS
Sbjct: 531 ESSGKE--PNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRS 588
Query: 645 GRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLL 704
G +++A LI TMP W SLL A K H +++ E+AAK+L+ LEP+ A+ YV+L
Sbjct: 589 GLLDDASNLISTMPCK-PHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVL 647
Query: 705 SNIYSSAGL---WDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELH 761
S +YS G D+ M+I+K + ++K+PG SWI + EVH FLAGD S +E+
Sbjct: 648 SQLYSIIGKNRDCDRIMNIKKSKR---IKKDPGSSWIILKGEVHNFLAGDESQLNLEEIG 704
Query: 762 EYLENLLQRM 771
L+ + + M
Sbjct: 705 FTLKMIRKEM 714
Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 214/482 (44%), Gaps = 68/482 (14%)
Query: 96 HVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXX 155
VF+ G A V +S+V+ Y K G + A +FDR+++R+ ++W +MI +
Sbjct: 198 RVFQ-GMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFE 256
Query: 156 -XXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSL--GKQVHAYTFRNG-DWRTFTN 211
+V S TL + AC RD + G Q+H R ++ F
Sbjct: 257 DGFGLFLRMRQEGDVKVNSNTLAVMFKAC---RDFVRYREGSQIHGLVSRMPLEFDLFLG 313
Query: 212 NALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVR 271
N+L++MY+KLG + EAKA+FG+ +KD VSWN++I+ L Q + EA Y + +
Sbjct: 314 NSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEA----YELFEK--- 366
Query: 272 PDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRW 331
+P GK++ + TD+I F G + K
Sbjct: 367 ---------MP----------GKDMVSW----TDMI-KGFSGKGEI---------SKCVE 393
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCK 391
+F + + W AMI+ + N + +EA+ F +M+ + + PNS T SS+L A
Sbjct: 394 LFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKML-QKEVCPNSYTFSSVLSATASLA 452
Query: 392 AFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMIT 451
++ IHG VVK D VQN+L+ MY + G + IF + +IVS+NTMI+
Sbjct: 453 DLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMIS 512
Query: 452 GYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEI 511
GY G AL L + ES +PN VT + +L C +
Sbjct: 513 GYSYNGFGKKALKLFSML-----------ESSGKEPNGVTFLALLSACVHVGYVDLGWK- 560
Query: 512 HAYALKQKLATDIAVG----SALIDMYAKCGCLNLSRIVFDQMPTR-NVITWNVLIMAYG 566
Y K + +I G + ++D+ + G L+ + + MP + + W L+ A
Sbjct: 561 --YFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASK 618
Query: 567 MH 568
H
Sbjct: 619 TH 620
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 7/149 (4%)
Query: 41 DHLRLQAQSSSFL------QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIH 94
D++ A S+F+ +A+ + M+ V P+++ F +VL A A + DL G QIH
Sbjct: 402 DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIH 461
Query: 95 GHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXX 154
G V K + ++V NSLV+MY KCG+ A+ +F IS+ + VS+N+MI+
Sbjct: 462 GRVVKMNIVN-DLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFG 520
Query: 155 XXXXXXXXXXXXXNVDPTSFTLVSIAHAC 183
+P T +++ AC
Sbjct: 521 KKALKLFSMLESSGKEPNGVTFLALLSAC 549
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 305 bits (782), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 179/584 (30%), Positives = 306/584 (52%), Gaps = 30/584 (5%)
Query: 195 QVHAYTFRNGDWRTFTNNA--LVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQN 252
Q+HA+ G+ ++ + L+ ++G I A+ +F + + +N++I S+
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRG 94
Query: 253 DRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFV 312
+E L M+ ++PD T + AC +L G+ + A+ + ++ FV
Sbjct: 95 KNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAV-DFGYKNDVFV 153
Query: 313 GSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESD 372
S+++++Y C K D+ +F + +R V W M+ G+A+ +A++ + EM E
Sbjct: 154 CSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEG- 212
Query: 373 FTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISK 432
F + + LL A +HGY+ + G + V+ +L+DMY+++G IE++
Sbjct: 213 FGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVAS 272
Query: 433 SIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTL 492
+F M + VSW ++I+G+ G + A + +MQ S+ +P+ VTL
Sbjct: 273 RVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQ-----------SLGFQPDLVTL 321
Query: 493 MTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPT 552
+ VL C +H Y LK+ + D +AL+DMY+KCG L+ SR +F+ +
Sbjct: 322 VGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGR 380
Query: 553 RNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVD 612
++++ WN +I YG+HG G+E + LF +M +SN I P+ T+ ++ +A SHSG+V+
Sbjct: 381 KDLVCWNTMISCYGIHGNGQEVVSLFLKMT---ESN--IEPDHATFASLLSALSHSGLVE 435
Query: 613 EGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVD----AWS 668
+G + F M + I+PS HY CL+DLL R+GRVEEA +I N +K+D W
Sbjct: 436 QGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMI-----NSEKLDNALPIWV 490
Query: 669 SLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMG 728
+LL C H+NL VG+IAA ++L L P+ L+SN +++A W + +RK M+
Sbjct: 491 ALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGA 550
Query: 729 VRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMR 772
+ K PG S IE E+ FL D SH + + + L NL +R
Sbjct: 551 MEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEIR 594
Score = 173 bits (439), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 183/381 (48%), Gaps = 9/381 (2%)
Query: 92 QIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRF 151
QIH V G +++ L+ G+ G+++ A VFD + R +NSMI R
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRG 94
Query: 152 XXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSN---LRDGLSLGKQVHAYTFRNGDWRT 208
+ P S T AC + L G ++ + + ++N
Sbjct: 95 KNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKND---V 151
Query: 209 FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQS 268
F ++++ +Y K G++DEA+ LFG +D++ W T+++ +Q + +A+ F M
Sbjct: 152 FVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNE 211
Query: 269 GVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADK 328
G D V + L A L + G+ +HGY R T L N V ++LVDMY +
Sbjct: 212 GFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYR-TGLPMNVVVETSLVDMYAKVGFIEV 270
Query: 329 GRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACV 388
VF ++ +T W ++I+G+A+N ++A + +EM F P+ TL +L AC
Sbjct: 271 ASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEM-QSLGFQPDLVTLVGVLVACS 329
Query: 389 RCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNT 448
+ + +H Y++KR D+ ALMDMYS+ G + S+ IF + R+D+V WNT
Sbjct: 330 QVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNT 388
Query: 449 MITGYVVCGRHDDALNLLHDM 469
MI+ Y + G + ++L M
Sbjct: 389 MISCYGIHGNGQEVVSLFLKM 409
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 180/380 (47%), Gaps = 11/380 (2%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+ + Y M+A + PD+ F +KA L G+ + FGY + V V +S+
Sbjct: 99 EVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKN-DVFVCSSV 157
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
+N+Y KCG + A +F +++ RD + W +M+ +
Sbjct: 158 LNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDR 217
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFG 232
++ + A +L D +G+ VH Y +R G +LV MYAK+G I+ A +F
Sbjct: 218 VVMLGLLQASGDLGD-TKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFS 276
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRT 292
K VSW ++IS +QN +A + M G +PD VTL L ACS + L+T
Sbjct: 277 RMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKT 336
Query: 293 GKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYA 352
G+ +H Y L+ L + +AL+DMY C R +F+ + R+ + WN MI+ Y
Sbjct: 337 GRLVHCYILKRHVL--DRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYG 394
Query: 353 RNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVV---KRGFE 409
+ E + LF++M ES+ P+ T +SLL A + L ++G H + V K +
Sbjct: 395 IHGNGQEVVSLFLKMT-ESNIEPDHATFASLLSAL--SHSGLVEQGQHWFSVMINKYKIQ 451
Query: 410 KDKYVQNALMDMYSRMGRIE 429
+ L+D+ +R GR+E
Sbjct: 452 PSEKHYVCLIDLLARAGRVE 471
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 140/318 (44%), Gaps = 3/318 (0%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R W + AQ+ L+A+ Y M G D +L+A+ + D +G+ +
Sbjct: 180 RDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSV 239
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
HG++++ G +V V SLV+MY K G + A VF R+ + VSW S+I+ +
Sbjct: 240 HGYLYRTGLP-MNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGL 298
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNA 213
P TLV + ACS + L G+ VH Y + T A
Sbjct: 299 ANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQV-GSLKTGRLVHCYILKRHVLDRVTATA 357
Query: 214 LVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPD 273
L+ MY+K G + ++ +F KDLV WNT+IS + +E + M +S + PD
Sbjct: 358 LMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPD 417
Query: 274 GVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVF 333
T AS L A SH ++ G+ + + + L+D+ + ++ +
Sbjct: 418 HATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMI 477
Query: 334 DG-ILRRTVAVWNAMIAG 350
+ L + +W A+++G
Sbjct: 478 NSEKLDNALPIWVALLSG 495
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/697 (26%), Positives = 342/697 (49%), Gaps = 42/697 (6%)
Query: 47 AQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTS 106
AQ+ A+ + +M + V D+ + ++ A + + ++ + +HG V K G+
Sbjct: 177 AQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI--- 233
Query: 107 VAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXX 166
A ++ L++MY C DL A VF+ + +D SW +M+AA
Sbjct: 234 FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRN 293
Query: 167 XNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG---DWRTFTNNALVTMYAKLGR 223
+V S A + + D L G +H Y + G D T +L++MY+K G
Sbjct: 294 YDVRMNKVAAASALQAAAYVGD-LVKGIAIHDYAVQQGLIGDVSVAT--SLMSMYSKCGE 350
Query: 224 IDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPA 283
++ A+ LF +D+D+VSW+ +I+S Q + +EA+ M++ ++P+ VTL S L
Sbjct: 351 LEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQG 410
Query: 284 CSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAV 343
C+ + R GK IH YA++ D+ +A++ MY C + F+ + +
Sbjct: 411 CAGVAASRLGKSIHCYAIK-ADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVA 469
Query: 344 WNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYV 403
+NA+ GY + ++A ++ M P+S T+ +L C C + ++G +
Sbjct: 470 FNALAQGYTQIGDANKAFDVYKNMKLHG-VCPDSRTMVGMLQTCAFCSDYARGSCVYGQI 528
Query: 404 VKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD-RRDIVSWNTMITGYVVCGRHDDA 462
+K GF+ + +V +AL++M+++ + + +F + VSWN M+ GY++ G+ ++A
Sbjct: 529 IKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEA 588
Query: 463 LNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLAT 522
+ M+ + +PN+VT + ++ +H+ ++ +
Sbjct: 589 VATFRQMKVEK-----------FQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCS 637
Query: 523 DIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMV 582
VG++L+DMYAKCG + S F ++ + +++WN ++ AY HG A+ LF M
Sbjct: 638 QTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSM- 696
Query: 583 AEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLG 642
E++P+ V+++++ +AC H+G+V+EG +F M H IE +HYAC+VDLLG
Sbjct: 697 ----QENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLG 752
Query: 643 RSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYV 702
++G EA ++++ M V W +LL + ++H NL + A QL+ LEP SHY
Sbjct: 753 KAGLFGEAVEMMRRMRVK-TSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY- 810
Query: 703 LLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIE 739
Q + + ++K P CSWIE
Sbjct: 811 ------------SQDRRLGEVNNVSRIKKVPACSWIE 835
Score = 236 bits (603), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 167/612 (27%), Positives = 276/612 (45%), Gaps = 32/612 (5%)
Query: 92 QIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRF 151
Q+HG + G N L+N Y + +FD + D V WNSMI R
Sbjct: 23 QVHGSLIVSGLKPH-----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRA 77
Query: 152 XX-XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTF 209
+DP ++ AC+ D G ++H G + +
Sbjct: 78 GLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMD-FKKGLRIHDLIAEMGLESDVY 136
Query: 210 TNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSG 269
ALV MY K + A+ +F KD+V+WNT++S L+QN ALL + M
Sbjct: 137 IGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCC 196
Query: 270 VRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKG 329
V D V+L + +PA S LE + +HG ++ + S S L+DMYCNC
Sbjct: 197 VDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFS---SGLIDMYCNCADLYAA 253
Query: 330 RWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVR 389
VF+ + R+ + W M+A YA N F +E ++LF +++ D N +S L A
Sbjct: 254 ESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELF-DLMRNYDVRMNKVAAASALQAAAY 312
Query: 390 CKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTM 449
+ IH Y V++G D V +LM MYS+ G +EI++ +F +++ RD+VSW+ M
Sbjct: 313 VGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAM 372
Query: 450 ITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXX 509
I Y G+HD+A++L DM R I +KPN+VTL +VL GC
Sbjct: 373 IASYEQAGQHDEAISLFRDMMR-----------IHIKPNAVTLTSVLQGCAGVAASRLGK 421
Query: 510 EIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHG 569
IH YA+K + +++ +A+I MYAKCG + + F+++P ++ + +N L Y G
Sbjct: 422 SIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIG 481
Query: 570 KGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEP 629
+A ++++ M + P+ T + + C+ G ++ + HG +
Sbjct: 482 DANKAFDVYKNMKLHG-----VCPDSRTMVGMLQTCAFCSDYARGSCVYGQI-IKHGFDS 535
Query: 630 SSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQ 689
L+++ + + A L K +W+ ++ +H E +Q
Sbjct: 536 ECHVAHALINMFTKCDALAAAIVLFDKCGFE-KSTVSWNIMMNGYLLHGQAEEAVATFRQ 594
Query: 690 LLV--LEPNVAS 699
+ V +PN +
Sbjct: 595 MKVEKFQPNAVT 606
Score = 236 bits (601), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 185/664 (27%), Positives = 314/664 (47%), Gaps = 28/664 (4%)
Query: 66 GVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAG 125
G+ PD ++F LKA AG D G +IH + + G S V + +LV MY K DL
Sbjct: 95 GIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLES-DVYIGTALVEMYCKARDLVS 153
Query: 126 AHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSN 185
A VFD++ +D V+WN+M++ + VD +L ++ A S
Sbjct: 154 ARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSK 213
Query: 186 LRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTV 245
L + + +H + G F+ + L+ MY + A+++F KD SW T+
Sbjct: 214 LEKS-DVCRCLHGLVIKKGFIFAFS-SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTM 271
Query: 246 ISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTD 305
+++ + N FEE L M VR + V ASAL A +++ L G IH YA++
Sbjct: 272 MAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQ-G 330
Query: 306 LIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFI 365
LI + V ++L+ MY C + + +F I R V W+AMIA Y + DEAI LF
Sbjct: 331 LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFR 390
Query: 366 EMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRM 425
+M+ PN+ TL+S+L C A + IH Y +K E + A++ MY++
Sbjct: 391 DMM-RIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKC 449
Query: 426 GRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPL 485
GR + F + +D V++N + GY G + A D Y++ + +
Sbjct: 450 GRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAF-----------DVYKNMKLHGV 498
Query: 486 KPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRI 545
P+S T++ +L C ++ +K ++ V ALI+M+ KC L + +
Sbjct: 499 CPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIV 558
Query: 546 VFDQMP-TRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAA 604
+FD+ ++ ++WN+++ Y +HG+ EEA+ FR+M EK +PN VT++ I A
Sbjct: 559 LFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEK-----FQPNAVTFVNIVRA 613
Query: 605 CSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKV 664
+ + G+++ H+ G + LVD+ + G +E + K + + K +
Sbjct: 614 AAELSALRVGMSV-HSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISN--KYI 670
Query: 665 DAWSSLLGACKIH--QNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRK 722
+W+++L A H + V + Q L+P+ S +LS AGL ++ I +
Sbjct: 671 VSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSAC-RHAGLVEEGKRIFE 729
Query: 723 KMKE 726
+M E
Sbjct: 730 EMGE 733
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 148/540 (27%), Positives = 245/540 (45%), Gaps = 21/540 (3%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
+ S+W + A + F + + + M V + A + L+AAA V DL G I
Sbjct: 263 KDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAI 322
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
H + + G V+VA SL++MY KCG+L A +F I DRD VSW++MIA+ +
Sbjct: 323 HDYAVQQGLIG-DVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQ 381
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFR-NGDWRTFTNN 212
++ P + TL S+ C+ + LGK +H Y + + + T
Sbjct: 382 HDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAAS-RLGKSIHCYAIKADIESELETAT 440
Query: 213 ALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRP 272
A+++MYAK GR A F KD V++N + +Q +A +M GV P
Sbjct: 441 AVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCP 500
Query: 273 DGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWV 332
D T+ L C+ G ++G +++ V AL++M+ C +
Sbjct: 501 DSRTMVGMLQTCAFCSDYARGSCVYGQIIKH-GFDSECHVAHALINMFTKCDALAAAIVL 559
Query: 333 FD--GILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRC 390
FD G + TV+ WN M+ GY + +EA+ F +M E F PN+ T +++ A
Sbjct: 560 FDKCGFEKSTVS-WNIMMNGYLLHGQAEEAVATFRQMKVEK-FQPNAVTFVNIVRAAAEL 617
Query: 391 KAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMI 450
A +H +++ GF V N+L+DMY++ G IE S+ F + + IVSWNTM+
Sbjct: 618 SALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTML 677
Query: 451 TGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXE 510
+ Y G A++L MQ + LKP+SV+ ++VL C
Sbjct: 678 SAYAAHGLASCAVSLFLSMQENE-----------LKPDSVSFLSVLSACRHAGLVEEGKR 726
Query: 511 I-HAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVI-TWNVLIMAYGMH 568
I + K+ ++ + ++D+ K G + + +M + + W L+ + MH
Sbjct: 727 IFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMH 786
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 299 bits (766), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 175/568 (30%), Positives = 295/568 (51%), Gaps = 25/568 (4%)
Query: 212 NALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQ-SGV 270
N L+ +LG + + LF + ++ + S+N +I L+ EA L LY ++ SG+
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGL 128
Query: 271 RPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGR 330
+PD T AC+ LE + G+ +H +L L + + +L+ MY C + R
Sbjct: 129 KPDKFTYNFVFIACAKLEEIGVGRSVHS-SLFKVGLERDVHINHSLIMMYAKCGQVGYAR 187
Query: 331 WVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRC 390
+FD I R WN+MI+GY+ + +A+ LF +M E F P+ TL S+L AC
Sbjct: 188 KLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKM-EEEGFEPDERTLVSMLGACSHL 246
Query: 391 KAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMI 450
+ + + ++ + L+ MY + G ++ ++ +F M ++D V+W MI
Sbjct: 247 GDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMI 306
Query: 451 TGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXE 510
T Y G+ +A L +M E + P++ TL TVL C +
Sbjct: 307 TVYSQNGKSSEAFKLFFEM-----------EKTGVSPDAGTLSTVLSACGSVGALELGKQ 355
Query: 511 IHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGK 570
I +A + L +I V + L+DMY KCG + + VF+ MP +N TWN +I AY G
Sbjct: 356 IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGH 415
Query: 571 GEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPS 630
+EAL LF RM + P+++T+I + +AC H+G+V +G FH M + G+ P
Sbjct: 416 AKEALLLFDRM--------SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPK 467
Query: 631 SDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQL 690
+HY ++DLL R+G ++EA++ ++ P ++ +++LGAC +++ + E A + L
Sbjct: 468 IEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEI-MLAAILGACHKRKDVAIREKAMRML 526
Query: 691 LVL-EPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLA 749
+ + E A +YV+ SN+ + +WD++ +R M++ GV K PGCSWIE E+ +FLA
Sbjct: 527 MEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLA 586
Query: 750 GDASHPQSKELHEYLENLL-QRMRKEGY 776
G +E L +LL + M++E Y
Sbjct: 587 GSDYLQCGREDSGSLFDLLVEEMKRERY 614
Score = 198 bits (503), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 190/384 (49%), Gaps = 23/384 (5%)
Query: 55 AISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLV 114
A+S Y M +G+ PD F + V A A + ++ +G+ +H +FK G V + +SL+
Sbjct: 116 ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGL-ERDVHINHSLI 174
Query: 115 NMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSF 174
MY KCG + A +FD I++RD VSWNSMI+ +P
Sbjct: 175 MMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDER 234
Query: 175 TLVSIAHACSNLRDGLSLGKQVH--AYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFG 232
TLVS+ ACS+L D L G+ + A T + G TF + L++MY K G +D A+ +F
Sbjct: 235 TLVSMLGACSHLGD-LRTGRLLEEMAITKKIG-LSTFLGSKLISMYGKCGDLDSARRVFN 292
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRT 292
KD V+W +I+ SQN + EA + M ++GV PD TL++ L AC + L
Sbjct: 293 QMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALEL 352
Query: 293 GKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYA 352
GK+I +A L N +V + LVDMY C + ++ VF+ + + A WNAMI YA
Sbjct: 353 GKQIETHA-SELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYA 411
Query: 353 RNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVR-------CKAFLDKEGIHGYVVK 405
EA+ LF M P+ T +L ACV C+ F + + G V K
Sbjct: 412 HQGHAKEALLLFDRM----SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPK 467
Query: 406 RGFEKDKYVQNALMDMYSRMGRIE 429
+ Y ++D+ SR G ++
Sbjct: 468 ----IEHYTN--IIDLLSRAGMLD 485
Score = 192 bits (487), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/483 (28%), Positives = 226/483 (46%), Gaps = 28/483 (5%)
Query: 74 FPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRI 133
F +LK VN L +QI + SV N L+ + GD + +F
Sbjct: 40 FLFLLKKCISVNQL---RQIQAQML-----LHSVEKPNFLIPKAVELGDFNYSSFLFSVT 91
Query: 134 SDRDHVSWNSMIAAACR-FXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSL 192
+ +H S+N MI + + P FT + AC+ L + + +
Sbjct: 92 EEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEE-IGV 150
Query: 193 GKQVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQ 251
G+ VH+ F+ G R N++L+ MYAK G++ A+ LF ++D VSWN++IS S+
Sbjct: 151 GRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSE 210
Query: 252 NDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSF 311
++A+ M + G PD TL S L ACSHL LRTG+ + A+ + ++F
Sbjct: 211 AGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAI-TKKIGLSTF 269
Query: 312 VGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYES 371
+GS L+ MY C D R VF+ ++++ W AMI Y++N EA KLF EM ++
Sbjct: 270 LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM-EKT 328
Query: 372 DFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEIS 431
+P++ TLS++L AC A + I + + + + YV L+DMY + GR+E +
Sbjct: 329 GVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEA 388
Query: 432 KSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVT 491
+F +M ++ +WN MIT Y G +AL L M S+P P+ +T
Sbjct: 389 LRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM------------SVP--PSDIT 434
Query: 492 LMTVLPGCXXXXXXXXXXE-IHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQM 550
+ VL C H + L I + +ID+ ++ G L+ + ++
Sbjct: 435 FIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERF 494
Query: 551 PTR 553
P +
Sbjct: 495 PGK 497
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 100/247 (40%), Gaps = 37/247 (14%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
AW + + +Q+ +A + M GV PD VL A V L LGKQI H
Sbjct: 301 AWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHA 360
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
+ ++ VA LV+MYGKCG + A VF+ + ++ +WN+MI A +
Sbjct: 361 SELSL-QHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITA---YAHQGHA 416
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTM 217
+V P+ T + + AC VHA G R F
Sbjct: 417 KEALLLFDRMSVPPSDITFIGVLSAC------------VHAGLVHQG-CRYF-------- 455
Query: 218 YAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTL 277
E ++FGL + + +I LS+ +EA F M + +PD + L
Sbjct: 456 -------HEMSSMFGLV--PKIEHYTNIIDLLSRAGMLDEAWEF---MERFPGKPDEIML 503
Query: 278 ASALPAC 284
A+ L AC
Sbjct: 504 AAILGAC 510
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 298 bits (763), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 190/629 (30%), Positives = 311/629 (49%), Gaps = 33/629 (5%)
Query: 35 SPSAWIDHLRLQ--AQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQ 92
S + +I H +Q A+ ++ A++ + G+P + F A+L+A L GKQ
Sbjct: 73 SKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQ 132
Query: 93 IHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSM-----IAA 147
+H H+ G S + LV+MY CG + A VFD + + SWN++ I+
Sbjct: 133 VHVHIRINGLESNEF-LRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISG 191
Query: 148 ACRFX-XXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDW 206
R+ NV S S A A S LR GL + HA +NG +
Sbjct: 192 KKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGA-SALRQGL----KTHALAIKNGLF 246
Query: 207 RT-FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEAL-LFLYH 264
+ F +LV MY K G++ A+ +F ++D+V W +I+ L+ N R EAL LF
Sbjct: 247 NSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTM 306
Query: 265 MLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCK 324
+ + + P+ V L + LP ++ L+ GKE+H + L++ + ++ FV S L+D+YC C
Sbjct: 307 ISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCG 366
Query: 325 KADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLL 384
GR VF G +R W A+++GYA N D+A++ + M E F P+ T++++L
Sbjct: 367 DMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEG-FRPDVVTIATVL 425
Query: 385 PACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIV 444
P C +A + IH Y +K F + + +LM MYS+ G E +F +++R++
Sbjct: 426 PVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVK 485
Query: 445 SWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXX 504
+W MI YV + + M + +P+SVT+ VL C
Sbjct: 486 AWTAMIDCYVENCDLRAGIEVFRLMLLSKH-----------RPDSVTMGRVLTVCSDLKA 534
Query: 505 XXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMA 564
E+H + LK++ + V + +I MY KCG L + FD + + +TW +I A
Sbjct: 535 LKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEA 594
Query: 565 YGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKAN 624
YG + +A+ F +MV+ + PN T+ A+ + CS +G VDE F+ M
Sbjct: 595 YGCNELFRDAINCFEQMVS-----RGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRM 649
Query: 625 HGIEPSSDHYACLVDLLGRSGRVEEAYKL 653
+ ++PS +HY+ +++LL R GRVEEA +L
Sbjct: 650 YNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 162/566 (28%), Positives = 270/566 (47%), Gaps = 32/566 (5%)
Query: 169 VDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEA 227
V+ T+F+ ++ AC R L GKQVH + NG + F LV MY G + +A
Sbjct: 109 VNATTFS--ALLEACVR-RKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDA 165
Query: 228 KALFGLFDDKDLVSWNTVI--SSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACS 285
+ +F ++ SWN ++ + +S R+++ L M + GV + +L++ + +
Sbjct: 166 QKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFA 225
Query: 286 HLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWN 345
LR G + H A++N L ++ F+ ++LVDMY C K R VFD I+ R + VW
Sbjct: 226 GASALRQGLKTHALAIKN-GLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWG 284
Query: 346 AMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVK 405
AMIAG A N+ EA+ LF M+ E PNS L+++LP KA + +H +V+K
Sbjct: 285 AMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLK 344
Query: 406 -RGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALN 464
+ + + +V + L+D+Y + G + + +F +R+ +SW +++GY GR D AL
Sbjct: 345 SKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALR 404
Query: 465 LLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDI 524
+ MQ+ +P+ VT+ TVLP C EIH YALK ++
Sbjct: 405 SIVWMQQEG-----------FRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNV 453
Query: 525 AVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAE 584
++ ++L+ MY+KCG +FD++ RNV W +I Y + +E+FR M+
Sbjct: 454 SLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLS 513
Query: 585 KDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLF-HTMKANHGIEPSSDHYACLVDLLGR 643
K RP+ VT + CS + G L H +K P A ++ + G+
Sbjct: 514 KH-----RPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGK 566
Query: 644 SGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLV--LEPNVASHY 701
G + A + +K W++++ A ++ +Q++ PN +
Sbjct: 567 CGDLRSANFSFDAVA--VKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFT 624
Query: 702 VLLSNIYSSAGLWDQAMDIRKKMKEM 727
+LS I S AG D+A M M
Sbjct: 625 AVLS-ICSQAGFVDEAYRFFNLMLRM 649
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 123/298 (41%), Gaps = 3/298 (1%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+ +W + A + F QA+ + M G PD VL A + + GK+I
Sbjct: 381 RNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
H + K + +V++ SL+ MY KCG +FDR+ R+ +W +MI
Sbjct: 441 HCYALKNLFLP-NVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCD 499
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNN 212
P S T+ + CS+L+ L LGK++H + + + F +
Sbjct: 500 LRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLK-ALKLGKELHGHILKKEFESIPFVSA 558
Query: 213 ALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRP 272
++ MY K G + A F K ++W +I + N+ F +A+ M+ G P
Sbjct: 559 RIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTP 618
Query: 273 DGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGR 330
+ T + L CS + LR +L + S ++++ C + ++ +
Sbjct: 619 NTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQ 676
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 297 bits (760), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 189/587 (32%), Positives = 305/587 (51%), Gaps = 44/587 (7%)
Query: 224 IDEAKALFGLFD-DKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALP 282
+D AK LF F + ++ +NT+IS++S + E M++ V PD T +
Sbjct: 84 LDLAKLLFLNFTPNPNVFVYNTMISAVSSSK--NECFGLYSSMIRHRVSPDRQTFLYLMK 141
Query: 283 ACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVA 342
A S L + K+IH + + + L +++ ++LV Y VF + V+
Sbjct: 142 ASSFLSEV---KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVS 198
Query: 343 VWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGY 402
+N MI GYA+ F EA+KL+ +MV + P+ T+ SLL C +G+HG+
Sbjct: 199 SFNVMIVGYAKQGFSLEALKLYFKMVSDG-IEPDEYTVLSLLVCCGHLSDIRLGKGVHGW 257
Query: 403 VVKRG--FEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHD 460
+ +RG + + + NAL+DMY + ++K F +M ++D+ SWNTM+ G+V G +
Sbjct: 258 IERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDME 317
Query: 461 DALNLLHDM----------------QRGQDDE------YEDDESIPLKPNSVTLMTVLPG 498
A + M ++G D YE +KP+ VT+++++ G
Sbjct: 318 AAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISG 377
Query: 499 CXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITW 558
+H ++ +L D + SALIDMY KCG + + +VF ++V W
Sbjct: 378 AANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALW 437
Query: 559 NVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLF 618
+I HG G++AL+LF RM E + PN VT +A+ ACSHSG+V+EGL++F
Sbjct: 438 TSMITGLAFHGNGQQALQLFGRMQEEG-----VTPNNVTLLAVLTACSHSGLVEEGLHVF 492
Query: 619 HTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLI-KTMPSNMKKVDAWSSLLGACKIH 677
+ MK G +P ++HY LVDLL R+GRVEEA ++ K MP + W S+L AC+
Sbjct: 493 NHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQ-SMWGSILSACRGG 551
Query: 678 QNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSW 737
+++E E+A +LL LEP YVLLSNIY++ G W + R+ M+ GV+K G S
Sbjct: 552 EDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSS 611
Query: 738 IEHRDEVHKFLAGD-ASHPQSKELHEYLENLLQRMRKEGYVPDTSCV 783
+ + +H+F+A + +HP+ E+ L++L M+ P C+
Sbjct: 612 VVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK-----PKLDCL 653
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 210/439 (47%), Gaps = 47/439 (10%)
Query: 35 SPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIH 94
+P+ ++ + + A SSS + Y++M+ V PD F ++KA++ ++++ KQIH
Sbjct: 97 NPNVFVYNTMISAVSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV---KQIH 153
Query: 95 GHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXX 154
H+ G S + NSLV Y + G+ A VF R+ D S+N MI +
Sbjct: 154 CHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFS 213
Query: 155 XXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRT---FTN 211
++P +T++S+ C +L D + LGK VH + R G + +
Sbjct: 214 LEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSD-IRLGKGVHGWIERRGPVYSSNLILS 272
Query: 212 NALVTMYAK-------------------------------LGRIDEAKALFGLFDDKDLV 240
NAL+ MY K LG ++ A+A+F +DLV
Sbjct: 273 NALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLV 332
Query: 241 SWNTVISSLSQN--DRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHG 298
SWN+++ S+ D+ LF + V+PD VT+ S + ++ L G+ +HG
Sbjct: 333 SWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHG 392
Query: 299 YALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDD 358
+R L ++F+ SAL+DMYC C ++ VF + VA+W +MI G A +
Sbjct: 393 LVIR-LQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQ 451
Query: 359 EAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGY---VVKRGFEKDKYVQ 415
+A++LF M E TPN+ TL ++L AC + L +EG+H + K GF+ +
Sbjct: 452 QALQLFGRM-QEEGVTPNNVTLLAVLTAC--SHSGLVEEGLHVFNHMKDKFGFDPETEHY 508
Query: 416 NALMDMYSRMGRIEISKSI 434
+L+D+ R GR+E +K I
Sbjct: 509 GSLVDLLCRAGRVEEAKDI 527
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 185/423 (43%), Gaps = 54/423 (12%)
Query: 169 VDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG--DWRTFTNNALVTMYAKLGRIDE 226
V P T + + A S L + KQ+H + +G + N+LV Y +LG
Sbjct: 129 VSPDRQTFLYLMKASSFLSEV----KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGV 184
Query: 227 AKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH 286
A+ +F D+ S+N +I ++ EAL + M+ G+ PD T+ S L C H
Sbjct: 185 AEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGH 244
Query: 287 LEMLRTGKEIHGYALRNTDLIDNSFVGS-ALVDMYCNC-------------KKADKGRW- 331
L +R GK +HG+ R + ++ + S AL+DMY C KK D W
Sbjct: 245 LSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWN 304
Query: 332 -----------------VFDGILRRTVAVWNAMIAGYARNEFDDEAIK-LFIEMVYESDF 373
VFD + +R + WN+++ GY++ D ++ LF EM
Sbjct: 305 TMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKV 364
Query: 374 TPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKS 433
P+ T+ SL+ +HG V++ + D ++ +AL+DMY + G IE +
Sbjct: 365 KPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFM 424
Query: 434 IFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLM 493
+F + +D+ W +MITG G AL L MQ +E + PN+VTL+
Sbjct: 425 VFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQ---------EEGV--TPNNVTLL 473
Query: 494 TVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVG--SALIDMYAKCGCLNLSR-IVFDQM 550
VL C + + +K K D +L+D+ + G + ++ IV +M
Sbjct: 474 AVLTACSHSGLVEEGLHVFNH-MKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKM 532
Query: 551 PTR 553
P R
Sbjct: 533 PMR 535
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 156/343 (45%), Gaps = 42/343 (12%)
Query: 47 AQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYA-ST 105
A+ L+A+ Y MV+ G+ PD + ++L ++D+ LGK +HG + + G S+
Sbjct: 208 AKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSS 267
Query: 106 SVAVANSLVNMYGKC-------------------------------GDLAGAHHVFDRIS 134
++ ++N+L++MY KC GD+ A VFD++
Sbjct: 268 NLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP 327
Query: 135 DRDHVSWNSMIAAACR--FXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSL 192
RD VSWNS++ + V P T+VS+ +N LS
Sbjct: 328 KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAAN-NGELSH 386
Query: 193 GKQVHAYTFR---NGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSL 249
G+ VH R GD F ++AL+ MY K G I+ A +F +KD+ W ++I+ L
Sbjct: 387 GRWVHGLVIRLQLKGD--AFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGL 444
Query: 250 SQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDN 309
+ + ++AL M + GV P+ VTL + L ACSH ++ G + +
Sbjct: 445 AFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPE 504
Query: 310 SFVGSALVDMYCNCKKADKGRWVFDG--ILRRTVAVWNAMIAG 350
+ +LVD+ C + ++ + + +R + ++W ++++
Sbjct: 505 TEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSA 547
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 10/222 (4%)
Query: 59 YANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYG 118
Y + V PD +++ AA +L+ G+ +HG V + + ++++L++MY
Sbjct: 356 YEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAF-LSSALIDMYC 414
Query: 119 KCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVS 178
KCG + A VF +++D W SMI V P + TL++
Sbjct: 415 KCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLA 474
Query: 179 IAHACSN---LRDGLSLGKQVH-AYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALF--G 232
+ ACS+ + +GL + + + F D T +LV + + GR++EAK +
Sbjct: 475 VLTACSHSGLVEEGLHVFNHMKDKFGF---DPETEHYGSLVDLLCRAGRVEEAKDIVQKK 531
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDG 274
+ W +++S+ + E A L L +L+ +G
Sbjct: 532 MPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEG 573
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 198/688 (28%), Positives = 326/688 (47%), Gaps = 33/688 (4%)
Query: 56 ISTYANMVAAGVPPDNFAFPAVLKAAA-GVNDLNLG-KQIHGHVFKFGYASTSVAVANSL 113
I+ + +++ + + P++F L+A N L +Q+ H+ K G V V SL
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGL-DRFVYVKTSL 91
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
+N+Y K G + A +FD + +RD V WN++I R P++
Sbjct: 92 LNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSA 151
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFG 232
TLV++ C +S G+ VH ++G + + NAL++ Y+K + A+ LF
Sbjct: 152 TTLVNLLPFCGQC-GFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFR 210
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPA-CSHLEMLR 291
DK VSWNT+I + SQ+ EEA+ +M + V VT+ + L A SH
Sbjct: 211 EMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSH----- 265
Query: 292 TGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGY 351
+ +H ++ ++++ V ++LV Y C ++ + ++ ++++ Y
Sbjct: 266 --EPLHCLVVK-CGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCY 322
Query: 352 ARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKD 411
A D A+ ++ + ++ L +L C + +HGY +K G
Sbjct: 323 AEKGDMDIAV-VYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTK 381
Query: 412 KYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQR 471
V N L+ MYS+ +E +F + ++SWN++I+G V GR A + H M
Sbjct: 382 TLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMML 441
Query: 472 GQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALI 531
L P+++T+ ++L GC E+H Y L+ + V +ALI
Sbjct: 442 TGG----------LLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALI 491
Query: 532 DMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEI 591
DMYAKCG + VF + TWN +I Y + G AL + M K +
Sbjct: 492 DMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEM-----REKGL 546
Query: 592 RPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAY 651
+P+E+T++ + +AC+H G VDEG F M GI P+ HYA +V LLGR+ EA
Sbjct: 547 KPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEAL 606
Query: 652 KLIKTMPSNMKKVDA-WSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSS 710
LI M ++K A W +LL AC IH+ LEVGE A+++ +L+ YVL+SN+Y++
Sbjct: 607 YLIWKM--DIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYAT 664
Query: 711 AGLWDQAMDIRKKMKEMGVRKEPGCSWI 738
+WD + +R MK+ G G S I
Sbjct: 665 EAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 202/439 (46%), Gaps = 27/439 (6%)
Query: 237 KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACS-HLEMLRTGKE 295
+DL +++++ S + + +L+S + P+ T++ L A + + E
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 296 IHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNE 355
L + L +V ++L+++Y + +FD + R VWNA+I GY+RN
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 356 FDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQ 415
++ +A KLFI M+ + F+P++TTL +LLP C +C +HG K G E D V+
Sbjct: 131 YECDAWKLFIVML-QQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 416 NALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDD 475
NAL+ YS+ + ++ +F M + VSWNTMI Y G ++A+ + +M
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM------ 243
Query: 476 EYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYA 535
++++ + P VT++ +L +H +K + DI+V ++L+ Y+
Sbjct: 244 ---FEKNVEISP--VTIINLLSA------HVSHEPLHCLVVKCGMVNDISVVTSLVCAYS 292
Query: 536 KCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNE 595
+CGCL + ++ +++ ++ Y G + A+ F K ++ +
Sbjct: 293 RCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYF-----SKTRQLCMKIDA 347
Query: 596 VTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIK 655
V + I C S +D G++L H G+ + L+ + + VE L +
Sbjct: 348 VALVGILHGCKKSSHIDIGMSL-HGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFE 406
Query: 656 TMPSNMKKVDAWSSLLGAC 674
+ + +W+S++ C
Sbjct: 407 QLQET--PLISWNSVISGC 423
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 183/628 (29%), Positives = 298/628 (47%), Gaps = 85/628 (13%)
Query: 219 AKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLA 278
AK GRI A+ +F + D V+WNT+++S S+ +EA+ + S +PD +
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 279 SALPACSHLEMLRTGKEIHGYALR---------NTDLID--------------------- 308
+ L C+ L ++ G++I +R N LID
Sbjct: 75 AILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 309 --NSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIE 366
N +L+ Y N ++ + VF + +R WN MI+G+A + + LF E
Sbjct: 135 SRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKE 194
Query: 367 MVYESDFTPNSTTLSSLLPAC-VRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRM 425
M+ ES+F P+ T SSL+ AC + +H ++K G+ +N+++ Y+++
Sbjct: 195 ML-ESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKL 253
Query: 426 G-------------------------------RIEISKSIFGSMDRRDIVSWNTMITGYV 454
G E + +F ++IV+W TMITGY
Sbjct: 254 GSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYG 313
Query: 455 VCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAY 514
G + AL +M + D + VL C IH
Sbjct: 314 RNGDGEQALRFFVEMMKSGVD-----------SDHFAYGAVLHACSGLALLGHGKMIHGC 362
Query: 515 ALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEA 574
+ VG+AL+++YAKCG + + F + +++++WN ++ A+G+HG ++A
Sbjct: 363 LIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQA 422
Query: 575 LELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHY 634
L+L+ M+A I+P+ VT+I + CSHSG+V+EG +F +M ++ I DH
Sbjct: 423 LKLYDNMIASG-----IKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHV 477
Query: 635 ACLVDLLGRSGRVEEAYKLIKTMPS---NMKKVDAWSSLLGACKIHQNLEVGEIAAKQLL 691
C++D+ GR G + EA L T S + +W +LLGAC H + E+G +K L
Sbjct: 478 TCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLK 537
Query: 692 VLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGD 751
+ EP+ +VLLSN+Y S G W + D+R++M E G++K PGCSWIE ++V F+ GD
Sbjct: 538 IAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGD 597
Query: 752 ASHPQSKELHEYLENLLQRMRK-EGYVP 778
+SHP+ +EL E L L MR E + P
Sbjct: 598 SSHPRLEELSETLNCLQHEMRNPETFGP 625
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/490 (25%), Positives = 208/490 (42%), Gaps = 86/490 (17%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
AW L ++ +AI+ + + + PD+++F A+L A + ++ G++I V
Sbjct: 37 AWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLV 96
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFD-------------------------- 131
+ G+ + S+ V NSL++MYGKC D A+ VF
Sbjct: 97 IRSGFCA-SLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFE 155
Query: 132 -------RISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACS 184
+ R +WN MI+ P +T S+ +ACS
Sbjct: 156 AALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACS 215
Query: 185 NLRDGLSLGKQVHAYTFRNGDWRTFT--NNALVTMYAKLGRIDEA--------------- 227
+ G+ VHA +NG W + N++++ Y KLG D+A
Sbjct: 216 ADSSNVVYGRMVHAVMLKNG-WSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSW 274
Query: 228 --------------KAL--FGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVR 271
KAL F L +K++V+W T+I+ +N E+AL F M++SGV
Sbjct: 275 NSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVD 334
Query: 272 PDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRW 331
D + L ACS L +L GK IHG L + ++VG+ALV++Y C +
Sbjct: 335 SDHFAYGAVLHACSGLALLGHGKMIHG-CLIHCGFQGYAYVGNALVNLYAKCGDIKEADR 393
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCK 391
F I + + WN M+ + + D+A+KL+ M+ S P++ T LL C
Sbjct: 394 AFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMI-ASGIKPDNVTFIGLLTTCSH-- 450
Query: 392 AFLDKEGIHGYVVKRGFEKDKYVQ------NALMDMYSRMGRIEISKSI---FGSM--DR 440
+ L +EG ++ KD + ++DM+ R G + +K + + S+ D
Sbjct: 451 SGLVEEGC---MIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDS 507
Query: 441 RDIVSWNTMI 450
+ SW T++
Sbjct: 508 SNNSSWETLL 517
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/534 (23%), Positives = 220/534 (41%), Gaps = 90/534 (16%)
Query: 118 GKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLV 177
K G +A A VFD + + D V+WN+M+ + R + P ++
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 178 SIAHACSNLRDGLSLGKQVHAYTFRNGDWRTF-TNNALVTMYAKLGRIDEAKALFG--LF 234
+I C++L + + G+++ + R+G + NN+L+ MY K A +F
Sbjct: 75 AILSTCASLGN-VKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCC 133
Query: 235 DDKDLVSW-------------------------------NTVISSLSQNDRFEEALLFLY 263
D ++ V+W N +IS + + E L
Sbjct: 134 DSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFK 193
Query: 264 HMLQSGVRPDGVTLASALPACS------------HLEMLRTG--------KEIHGY---- 299
ML+S +PD T +S + ACS H ML+ G + +
Sbjct: 194 EMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKL 253
Query: 300 -----ALRNTDLID--NSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYA 352
A+R + I+ ++++D + +K VF + + W MI GY
Sbjct: 254 GSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYG 313
Query: 353 RNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDK 412
RN ++A++ F+EM+ +S + ++L AC + IHG ++ GF+
Sbjct: 314 RNGDGEQALRFFVEMM-KSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYA 372
Query: 413 YVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRG 472
YV NAL+++Y++ G I+ + FG + +D+VSWNTM+ + V G D AL L
Sbjct: 373 YVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKL------- 425
Query: 473 QDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQ-KLATDIAVGSALI 531
Y++ + +KP++VT + +L C I +K ++ ++ + +I
Sbjct: 426 ----YDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMI 481
Query: 532 DMYAKCGCL--------NLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALEL 577
DM+ + G L S +V D + N +W L+ A H E E+
Sbjct: 482 DMFGRGGHLAEAKDLATTYSSLVTD---SSNNSSWETLLGACSTHWHTELGREV 532
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 13/206 (6%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
QA+ + M+ +GV D+FA+ AVL A +G+ L GK IHG + G+ + V N+L
Sbjct: 320 QALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAY-VGNAL 378
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
VN+Y KCGD+ A F I+++D VSWN+M+ A + P +
Sbjct: 379 VNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDN 438
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTN----NALVTMYAKLGRIDEAKA 229
T + + CS+ GL + + + D+R ++ M+ + G + EAK
Sbjct: 439 VTFIGLLTTCSH--SGL-VEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKD 495
Query: 230 LFGLF-----DDKDLVSWNTVISSLS 250
L + D + SW T++ + S
Sbjct: 496 LATTYSSLVTDSSNNSSWETLLGACS 521
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 291 bits (746), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 176/519 (33%), Positives = 278/519 (53%), Gaps = 39/519 (7%)
Query: 276 TLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDG 335
TL S L +C ++ + + IH +R D +FV L+ + D VF
Sbjct: 31 TLISVLRSCKNIAHVPS---IHAKIIRTFHDQD-AFVVFELIRVCSTLDSVDYAYDVFSY 86
Query: 336 ILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC--VRCKAF 393
+ V ++ AMI G+ + + + L+ M++ S P++ ++S+L AC C+
Sbjct: 87 VSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNS-VLPDNYVITSVLKACDLKVCRE- 144
Query: 394 LDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGY 453
IH V+K GF + V +M++Y + G + +K +F M RD V+ MI Y
Sbjct: 145 -----IHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCY 199
Query: 454 VVCGRHDDALNLLHD-----------MQRGQDDEYEDDESIPL---------KPNSVTLM 493
CG +AL L D M G E ++++ L N T +
Sbjct: 200 SECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAV 259
Query: 494 TVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR 553
VL C +H++ Q++ VG+ALI+MY++CG +N +R VF M +
Sbjct: 260 CVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDK 319
Query: 554 NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDE 613
+VI++N +I MHG EA+ FR MV N+ RPN+VT +A+ ACSH G++D
Sbjct: 320 DVISYNTMISGLAMHGASVEAINEFRDMV-----NRGFRPNQVTLVALLNACSHGGLLDI 374
Query: 614 GLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGA 673
GL +F++MK +EP +HY C+VDLLGR GR+EEAY+ I+ +P + +LL A
Sbjct: 375 GLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHI-MLGTLLSA 433
Query: 674 CKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEP 733
CKIH N+E+GE AK+L E + YVLLSN+Y+S+G W ++ +IR+ M++ G+ KEP
Sbjct: 434 CKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEP 493
Query: 734 GCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMR 772
GCS IE +++H+FL GD +HP + +++ L+ L + +R
Sbjct: 494 GCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILR 532
Score = 140 bits (353), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 139/292 (47%), Gaps = 41/292 (14%)
Query: 37 SAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGH 96
+A ID +S+ +S Y M+ V PDN+ +VLKA DL + ++IH
Sbjct: 96 TAMIDGFVSSGRSA---DGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQ 148
Query: 97 VFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVS---------------- 140
V K G+ S S +V ++ +YGK G+L A +FD + DRDHV+
Sbjct: 149 VLKLGFGS-SRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKE 207
Query: 141 ---------------WNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSN 185
W +MI R NV FT V + ACS+
Sbjct: 208 ALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSD 267
Query: 186 LRDGLSLGKQVHAYT-FRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNT 244
L L LG+ VH++ + + F NAL+ MY++ G I+EA+ +F + DKD++S+NT
Sbjct: 268 L-GALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNT 326
Query: 245 VISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEI 296
+IS L+ + EA+ M+ G RP+ VTL + L ACSH +L G E+
Sbjct: 327 MISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEV 378
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 131/541 (24%), Positives = 230/541 (42%), Gaps = 87/541 (16%)
Query: 175 TLVSIAHACSNLRDGLSLGKQVHAYTFRN-GDWRTFTNNALVTMYAKLGRIDEAKALFGL 233
TL+S+ +C N+ S +HA R D F L+ + + L +D A +F
Sbjct: 31 TLISVLRSCKNIAHVPS----IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSY 86
Query: 234 FDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACS-------H 286
+ ++ + +I + R + + + M+ + V PD + S L AC H
Sbjct: 87 VSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIH 146
Query: 287 LEMLRTG-----------KEIHGYA--LRNT-----DLIDNSFV-GSALVDMYCNCKKAD 327
++L+ G EI+G + L N ++ D V + +++ Y C
Sbjct: 147 AQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIK 206
Query: 328 KGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
+ +F + + W AMI G RN+ ++A++LF EM E + + N T +L AC
Sbjct: 207 EALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME-NVSANEFTAVCVLSAC 265
Query: 388 VRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWN 447
A +H +V + E +V NAL++MYSR G I ++ +F M +D++S+N
Sbjct: 266 SDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYN 325
Query: 448 TMITGYVVCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXX 506
TMI+G + G +A+N DM RG +PN VTL+ +L C
Sbjct: 326 TMISGLAMHGASVEAINEFRDMVNRG------------FRPNQVTLVALLNACSH----- 368
Query: 507 XXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYG 566
L+D+ + N + VF+ P + + ++ G
Sbjct: 369 ---------------------GGLLDIGLE--VFNSMKRVFNVEP--QIEHYGCIVDLLG 403
Query: 567 MHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHG 626
G+ EEA N I P+ + + +AC G ++ G + + +
Sbjct: 404 RVGRLEEAYRFI--------ENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESEN 455
Query: 627 IEPSSDHYACLVDLLGRSGRVEEAYKLIKTM-PSNMKKVDAWSSLLGACKIHQNLEVGEI 685
P S Y L +L SG+ +E+ ++ ++M S ++K S++ +IH+ L VG+I
Sbjct: 456 --PDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFL-VGDI 512
Query: 686 A 686
A
Sbjct: 513 A 513
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 117/295 (39%), Gaps = 44/295 (14%)
Query: 37 SAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGH 96
+A ID L ++ +A+ + M V + F VL A + + L LG+ +H
Sbjct: 224 TAMIDGL---VRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSF 280
Query: 97 VFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXX 156
V + S V N+L+NMY +CGD+ A VF + D+D +S+N+MI+
Sbjct: 281 V-ENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVE 339
Query: 157 XXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVT 216
P TLV++ +ACS+ L +G +V N R F +
Sbjct: 340 AINEFRDMVNRGFRPNQVTLVALLNACSH-GGLLDIGLEVF-----NSMKRVFNVEPQIE 393
Query: 217 MYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVT 276
Y ++ L + R EEA F+ ++ + PD +
Sbjct: 394 HYG------------------------CIVDLLGRVGRLEEAYRFIENI---PIEPDHIM 426
Query: 277 LASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRW 331
L + L AC + G++I + + ++V L ++Y A G+W
Sbjct: 427 LGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYV--LLSNLY-----ASSGKW 474
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 289 bits (740), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 183/550 (33%), Positives = 274/550 (49%), Gaps = 56/550 (10%)
Query: 231 FGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEML 290
FG +D L WN VI S S +ALL L ML++GV D +L+ L ACS L +
Sbjct: 80 FGEVEDPFL--WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFV 137
Query: 291 RTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAG 350
+ G +IHG+ L+ T L + F+ + L+ +Y C R +FD + +R +N+MI G
Sbjct: 138 KGGMQIHGF-LKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDG 196
Query: 351 YARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEK 410
Y + A +LF M E N + +S++ + +D I + EK
Sbjct: 197 YVKCGLIVSARELFDLMPME---MKNLISWNSMISGYAQTSDGVD---IASKLFADMPEK 250
Query: 411 DKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCG------------- 457
D N+++D Y + GRIE +K +F M RRD+V+W TMI GY G
Sbjct: 251 DLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP 310
Query: 458 ------------------RHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
H +AL + DM++ L P+ TL+ VLP
Sbjct: 311 HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESH----------LLPDDTTLVIVLPAI 360
Query: 500 XXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWN 559
++H Y ++++ +G ALIDMY+KCG + + +VF+ + +++ WN
Sbjct: 361 AQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWN 420
Query: 560 VLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFH 619
+I +HG GE A ++ ++ ++P+++T++ + ACSHSG+V EGL F
Sbjct: 421 AMIGGLAIHGLGESAFDMLLQI-----ERLSLKPDDITFVGVLNACSHSGLVKEGLLCFE 475
Query: 620 TMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQN 679
M+ H IEP HY C+VD+L RSG +E A LI+ MP V W + L AC H+
Sbjct: 476 LMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDV-IWRTFLTACSHHKE 534
Query: 680 LEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIE 739
E GE+ AK L++ S YVLLSN+Y+S G+W +R MKE + K PGCSWIE
Sbjct: 535 FETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIE 594
Query: 740 HRDEVHKFLA 749
VH+F
Sbjct: 595 LDGRVHEFFV 604
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 205/463 (44%), Gaps = 51/463 (11%)
Query: 36 PSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHG 95
P W ++ + QA+ M+ GV D F+ VLKA + + + G QIHG
Sbjct: 86 PFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHG 145
Query: 96 HVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXX 155
+ K G S + + N L+ +Y KCG L + +FDR+ RD VS+NSMI +
Sbjct: 146 FLKKTGLWS-DLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIV 204
Query: 156 XXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALV 215
+ S+ S+ + DG+ + ++ A D ++ N+++
Sbjct: 205 SARELFDLMPMEMKNLISWN--SMISGYAQTSDGVDIASKLFA-DMPEKDLISW--NSMI 259
Query: 216 TMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLS------------------------- 250
Y K GRI++AK LF + +D+V+W T+I +
Sbjct: 260 DGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNS 319
Query: 251 ------QNDRFEEALLFLYHM-LQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRN 303
QN EAL M +S + PD TL LPA + L L ++H Y +
Sbjct: 320 MMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEK 379
Query: 304 TDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKL 363
+ +G AL+DMY C VF+GI +++ WNAMI G A + + A +
Sbjct: 380 QFYLGGK-LGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDM 438
Query: 364 FIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGY-VVKRGFEKDKYVQN--ALMD 420
++ + P+ T +L AC + L KEG+ + +++R + + +Q+ ++D
Sbjct: 439 LLQ-IERLSLKPDDITFVGVLNAC--SHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVD 495
Query: 421 MYSRMGRIEISKSIFGSM--DRRDIVSWNTMITGYVVCGRHDD 461
+ SR G IE++K++ M + D++ W T +T C H +
Sbjct: 496 ILSRSGSIELAKNLIEEMPVEPNDVI-WRTFLTA---CSHHKE 534
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 133/554 (24%), Positives = 238/554 (42%), Gaps = 61/554 (11%)
Query: 77 VLKAAAGVNDLNLGKQIHGHVFKFGYASTS-------VAVANS---LVNMYGKCGDLAGA 126
VL + +D+N QIHG + K G S +A A+S + + +C +
Sbjct: 18 VLGSCKTSDDVN---QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARC--VFHE 72
Query: 127 HHV--FDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACS 184
+HV F D WN++I + V F+L + ACS
Sbjct: 73 YHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACS 132
Query: 185 NLRDGLSLGKQVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWN 243
L + G Q+H + + G W F N L+ +Y K G + ++ +F +D VS+N
Sbjct: 133 RL-GFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYN 191
Query: 244 TVISS-------LSQNDRF-----EEALLFLYHMLQSGV--RPDGVTLASALPA-CSHLE 288
++I +S + F E L ++ + SG DGV +AS L A +
Sbjct: 192 SMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKD 251
Query: 289 MLRTGKEIHGYALRN-----TDLID-----NSFVGSALVDMYCNCKKADKGRWVFDGILR 338
++ I GY L D + + ++D Y + +FD +
Sbjct: 252 LISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPH 311
Query: 339 RTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEG 398
R V +N+M+AGY +N++ EA+++F +M ES P+ TTL +LPA +
Sbjct: 312 RDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAID 371
Query: 399 IHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGR 458
+H Y+V++ F + AL+DMYS+ G I+ + +F ++ + I WN MI G + G
Sbjct: 372 MHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGL 431
Query: 459 HDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYAL-- 516
+ A ++L ++R + LKP+ +T + VL C + + L
Sbjct: 432 GESAFDMLLQIER-----------LSLKPDDITFVGVLNACSHSGLVKEG--LLCFELMR 478
Query: 517 -KQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR-NVITWNVLIMAYGMHGKGEEA 574
K K+ + ++D+ ++ G + L++ + ++MP N + W + A H + E
Sbjct: 479 RKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETG 538
Query: 575 LELFRRMVAEKDSN 588
+ + ++ + N
Sbjct: 539 ELVAKHLILQAGYN 552
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 128/310 (41%), Gaps = 47/310 (15%)
Query: 379 TLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGR---IEISKSIF 435
++SS + CK D IHG ++K G K+ + ++ ++ R + ++ +F
Sbjct: 11 SISSTIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVF 70
Query: 436 GSM--------DRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKP 487
+ D WN +I + G+D +
Sbjct: 71 HEYHVCSFSFGEVEDPFLWNAVIKSH----------------SHGKDPRQALLLLCLMLE 114
Query: 488 NSV-----TLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNL 542
N V +L VL C +IH + K L +D+ + + LI +Y KCGCL L
Sbjct: 115 NGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGL 174
Query: 543 SRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIF 602
SR +FD+MP R+ +++N +I Y G A ELF M E N +++ ++
Sbjct: 175 SRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPME-------MKNLISWNSMI 227
Query: 603 AACSH-SGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNM 661
+ + S VD LF M I +S ++D + GR+E+A L MP
Sbjct: 228 SGYAQTSDGVDIASKLFADMPEKDLISWNS-----MIDGYVKHGRIEDAKGLFDVMPR-- 280
Query: 662 KKVDAWSSLL 671
+ V W++++
Sbjct: 281 RDVVTWATMI 290
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 288 bits (737), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 151/425 (35%), Positives = 240/425 (56%), Gaps = 20/425 (4%)
Query: 361 IKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMD 420
+K + +++ S T + LL C + K + + IH + GF ++Y++ L+
Sbjct: 92 LKEAVGLLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLI 151
Query: 421 MYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDD 480
+Y+ G ++ + +F S+ RD++ WN MI+GYV G + L + +DM++ +
Sbjct: 152 LYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNR------- 204
Query: 481 ESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCL 540
+ P+ T +V C HA +K+ + ++I V SAL+DMY KC
Sbjct: 205 ----IVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSF 260
Query: 541 NLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIA 600
+ VFDQ+ TRNVITW LI YG HGK E L+ F +M E RPN VT++
Sbjct: 261 SDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEG-----CRPNPVTFLV 315
Query: 601 IFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSN 660
+ AC+H G+VD+G F++MK ++GIEP HYA +VD LGR+GR++EAY+ + P
Sbjct: 316 VLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCK 375
Query: 661 MKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDI 720
+ W SLLGAC+IH N+++ E+AA + L L+P +YV+ +N Y+S GL + A +
Sbjct: 376 -EHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKV 434
Query: 721 RKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVP-- 778
R+KM+ GV+K+PG S IE + EVH+F+ D SH S+++++ + + Y P
Sbjct: 435 RRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPDG 494
Query: 779 -DTSC 782
D+SC
Sbjct: 495 LDSSC 499
Score = 123 bits (309), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 123/265 (46%), Gaps = 9/265 (3%)
Query: 168 NVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDE 226
V+P ++ + + C R + GK++HA F G + L+ +YA G +
Sbjct: 105 QVEPETYAV--LLQECKQ-RKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQT 161
Query: 227 AKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH 286
A LF +DL+ WN +IS Q +E L Y M Q+ + PD T AS ACS
Sbjct: 162 AGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSA 221
Query: 287 LEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNA 346
L+ L GK H ++ + N V SALVDMY C G VFD + R V W +
Sbjct: 222 LDRLEHGKRAHAVMIKRC-IKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTS 280
Query: 347 MIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKR 406
+I+GY + E +K F E + E PN T +L AC +DK H Y +KR
Sbjct: 281 LISGYGYHGKVSEVLKCF-EKMKEEGCRPNPVTFLVVLTACNH-GGLVDKGWEHFYSMKR 338
Query: 407 --GFEKDKYVQNALMDMYSRMGRIE 429
G E + A++D R GR++
Sbjct: 339 DYGIEPEGQHYAAMVDTLGRAGRLQ 363
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 168/406 (41%), Gaps = 37/406 (9%)
Query: 209 FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQS 268
F+ NA + L ++ F + + + + + L R +EA+ L+ S
Sbjct: 48 FSGNATTILRRMLA--EKRIGRFQVENQRKTEKLDKTLKGLCVTGRLKEAVGLLW---SS 102
Query: 269 GVRPDGVTLASALPACSHLEMLRTGKEIH------GYALRNTDLIDNSFVGSALVDMYCN 322
G++ + T A L C + GK IH G+AL N ++ L+ +Y
Sbjct: 103 GLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFAL-------NEYLKVKLLILYAL 155
Query: 323 CKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSS 382
+F + R + WNAMI+GY + + E + ++ +M ++ P+ T +S
Sbjct: 156 SGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDM-RQNRIVPDQYTFAS 214
Query: 383 LLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRD 442
+ AC + H ++KR + + V +AL+DMY + +F + R+
Sbjct: 215 VFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRN 274
Query: 443 IVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXX 502
+++W ++I+GY G+ + L M+ +E +PN VT + VL C
Sbjct: 275 VITWTSLISGYGYHGKVSEVLKCFEKMK---------EEGC--RPNPVTFLVVLTACNHG 323
Query: 503 XXXXXXXEIHAYALKQKLATDIAVG--SALIDMYAKCGCLNLSRIVFDQMPTR-NVITWN 559
E H Y++K+ + +A++D + G L + + P + + W
Sbjct: 324 GLVDKGWE-HFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWG 382
Query: 560 VLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAAC 605
L+ A +HG + LEL E D N V + +A+C
Sbjct: 383 SLLGACRIHG-NVKLLELAATKFLELDPTNG--GNYVVFANGYASC 425
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 6/237 (2%)
Query: 67 VPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGA 126
V P+ +A +L+ + GK+IH +F G+A L+ +Y GDL A
Sbjct: 106 VEPETYA--VLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLI-LYALSGDLQTA 162
Query: 127 HHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNL 186
+F + RD + WN+MI+ + + P +T S+ ACS L
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSAL 222
Query: 187 RDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTV 245
D L GK+ HA + ++ALV MY K + +F +++++W ++
Sbjct: 223 -DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSL 281
Query: 246 ISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALR 302
IS + + E L M + G RP+ VT L AC+H ++ G E H Y+++
Sbjct: 282 ISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMK 337
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 8/178 (4%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+ + Y +M + PD + F +V +A + ++ L GK+ H + K S ++ V ++L
Sbjct: 192 EGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKS-NIIVDSAL 250
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
V+MY KC + H VFD++S R+ ++W S+I+ P
Sbjct: 251 VDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNP 310
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNN----ALVTMYAKLGRIDEA 227
T + + AC++ GL H Y+ + D+ A+V + GR+ EA
Sbjct: 311 VTFLVVLTACNH--GGLVDKGWEHFYSMKR-DYGIEPEGQHYAAMVDTLGRAGRLQEA 365
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 181/596 (30%), Positives = 310/596 (52%), Gaps = 44/596 (7%)
Query: 183 CSNLRDGLSLGKQVHAYTFR-NGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVS 241
C+NL KQ+HA R N L++ + + + A +F + ++
Sbjct: 29 CANLNQV----KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHL 84
Query: 242 WNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYAL 301
N++I + +QN + +A M + G+ D T L ACS L K +H + +
Sbjct: 85 CNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH-I 143
Query: 302 RNTDLIDNSFVGSALVDMYCNCKK--ADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDE 359
L + +V +AL+D Y C +F+ + R WN+M+ G + +
Sbjct: 144 EKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRD 203
Query: 360 AIKLFIEMVYESDFTPNSTTLSSLLPACVRC----KAFLDKEGIHGYVVKRGFEKDKYVQ 415
A +LF EM + N+ +L RC KAF + ++ E++
Sbjct: 204 ARRLFDEMPQRDLISWNT-----MLDGYARCREMSKAF--------ELFEKMPERNTVSW 250
Query: 416 NALMDMYSRMGRIEISKSIFGSMD--RRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQ 473
+ ++ YS+ G +E+++ +F M +++V+W +I GY G +A L+ M
Sbjct: 251 STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASG 310
Query: 474 DDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDM 533
LK ++ ++++L C IH+ + L ++ V +AL+DM
Sbjct: 311 -----------LKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDM 359
Query: 534 YAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRP 593
YAKCG L + VF+ +P +++++WN ++ G+HG G+EA+ELF RM E IRP
Sbjct: 360 YAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREG-----IRP 414
Query: 594 NEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKL 653
++VT+IA+ +C+H+G++DEG++ F++M+ + + P +HY CLVDLLGR GR++EA K+
Sbjct: 415 DKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKV 474
Query: 654 IKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGL 713
++TMP V W +LLGAC++H +++ + L+ L+P +Y LLSNIY++A
Sbjct: 475 VQTMPME-PNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAED 533
Query: 714 WDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQ 769
W+ DIR KMK MGV K G S +E D +H+F D SHP+S ++++ L +L++
Sbjct: 534 WEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589
Score = 157 bits (396), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 213/427 (49%), Gaps = 24/427 (5%)
Query: 43 LRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGY 102
+R AQ+S QA ++ M G+ DNF +P +LKA +G + L + K +H H+ K G
Sbjct: 89 IRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGL 148
Query: 103 ASTSVAVANSLVNMYGKCGDLA--GAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXX 160
S+ + V N+L++ Y +CG L A +F+++S+RD VSWNSM+ +
Sbjct: 149 -SSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRL 207
Query: 161 XXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAK 220
++ + L A C + L +++ RN T + + +V Y+K
Sbjct: 208 FDEMPQRDLISWNTMLDGYAR-CREMSKAFELFEKMPE---RN----TVSWSTMVMGYSK 259
Query: 221 LGRIDEAKALFG--LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLA 278
G ++ A+ +F K++V+W +I+ ++ +EA + M+ SG++ D +
Sbjct: 260 AGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVI 319
Query: 279 SALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILR 338
S L AC+ +L G IH L+ ++L N++V +AL+DMY C K VF+ I +
Sbjct: 320 SILAACTESGLLSLGMRIHSI-LKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPK 378
Query: 339 RTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEG 398
+ + WN M+ G + EAI+LF M E P+ T ++L +C A L EG
Sbjct: 379 KDLVSWNTMLHGLGVHGHGKEAIELFSRMRREG-IRPDKVTFIAVLCSC--NHAGLIDEG 435
Query: 399 I-HGYVVKRGFEKDKYVQN--ALMDMYSRMGRIEISKSIFGSMDRR-DIVSWNTMITGYV 454
I + Y +++ ++ V++ L+D+ R+GR++ + + +M ++V W ++
Sbjct: 436 IDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGA-- 493
Query: 455 VCGRHDD 461
C H++
Sbjct: 494 -CRMHNE 499
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 6/252 (2%)
Query: 111 NSLVNMYGKCGDLAGAHHVFDR--ISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXN 168
+++V Y K GD+ A +FD+ + ++ V+W +IA
Sbjct: 251 STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASG 310
Query: 169 VDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFR-NGDWRTFTNNALVTMYAKLGRIDEA 227
+ + ++SI AC+ LSLG ++H+ R N + NAL+ MYAK G + +A
Sbjct: 311 LKFDAAAVISILAACTE-SGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKA 369
Query: 228 KALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHL 287
+F KDLVSWNT++ L + +EA+ M + G+RPD VT + L +C+H
Sbjct: 370 FDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHA 429
Query: 288 EMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI-LRRTVAVWNA 346
++ G + + DL+ LVD+ + + V + + V +W A
Sbjct: 430 GLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGA 489
Query: 347 MI-AGYARNEFD 357
++ A NE D
Sbjct: 490 LLGACRMHNEVD 501
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 173/431 (40%), Gaps = 83/431 (19%)
Query: 389 RCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNT 448
+C + +H +++R +D ++ L+ S + ++ +F + ++ N+
Sbjct: 28 KCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNS 87
Query: 449 MITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXX 508
+I + + A + +MQR L ++ T +L C
Sbjct: 88 LIRAHAQNSQPYQAFFVFSEMQR-----------FGLFADNFTYPFLLKACSGQSWLPVV 136
Query: 509 XEIHAYALKQKLATDIAVGSALIDMYAKCGCLNL-------------------------- 542
+H + K L++DI V +ALID Y++CG L +
Sbjct: 137 KMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLV 196
Query: 543 -------SRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNE 595
+R +FD+MP R++I+WN ++ Y + +A ELF +M N
Sbjct: 197 KAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPER---------NT 247
Query: 596 VTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLG--RSGRVEEAYKL 653
V++ + S +G ++ +F M P+ + + + G G ++EA +L
Sbjct: 248 VSWSTMVMGYSKAGDMEMARVMFDKMPL-----PAKNVVTWTIIIAGYAEKGLLKEADRL 302
Query: 654 IKTMPSNMKKVDAWS--SLLGACKIHQNLEVGEIAAKQLLVLEPNVASH-YVL--LSNIY 708
+ M ++ K DA + S+L AC L +G ++ N+ S+ YVL L ++Y
Sbjct: 303 VDQMVASGLKFDAAAVISILAACTESGLLSLG--MRIHSILKRSNLGSNAYVLNALLDMY 360
Query: 709 SSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLL 768
+ G +A D+ + K+ SW + L G H KE E L
Sbjct: 361 AKCGNLKKAFDVFND-----IPKKDLVSW-------NTMLHGLGVHGHGKEAIE----LF 404
Query: 769 QRMRKEGYVPD 779
RMR+EG PD
Sbjct: 405 SRMRREGIRPD 415
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 285 bits (730), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 183/584 (31%), Positives = 286/584 (48%), Gaps = 71/584 (12%)
Query: 183 CSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKL---GRIDEAKALFGLFDDKDL 239
C N+R KQ+HA NG + + A L G + A LF D+
Sbjct: 22 CKNIRTL----KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDV 77
Query: 240 VSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGY 299
N V+ +Q+ + E+ + M + GV PD T L ACS LE G HG
Sbjct: 78 SICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGK 137
Query: 300 ALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDE 359
+R+ + N +V +AL+ + NC +FD + W++M +GYA+ DE
Sbjct: 138 VVRH-GFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDE 196
Query: 360 AIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALM 419
A++LF EM Y+ N ++ C++CK
Sbjct: 197 AMRLFDEMPYKDQVAWNV-----MITGCLKCK---------------------------- 223
Query: 420 DMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYED 479
++ ++ +F +D+V+WN MI+GYV CG +AL + +M+ +
Sbjct: 224 -------EMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGE----- 271
Query: 480 DESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQ-KLATDIAVGS----ALIDMY 534
P+ VT++++L C +H Y L+ +++ I VG+ ALIDMY
Sbjct: 272 ------HPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMY 325
Query: 535 AKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPN 594
AKCG ++ + VF + R++ TWN LI+ +H E ++E+F M K + PN
Sbjct: 326 AKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLK-----VWPN 379
Query: 595 EVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLI 654
EVT+I + ACSHSG VDEG F M+ + IEP+ HY C+VD+LGR+G++EEA+ +
Sbjct: 380 EVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFV 439
Query: 655 KTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLW 714
++M + W +LLGACKI+ N+E+G+ A ++LL + + + YVLLSNIY+S G W
Sbjct: 440 ESMKIEPNAI-VWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQW 498
Query: 715 DQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSK 758
D +RK + V+K G S IE D+ +S P+S+
Sbjct: 499 DGVQKVRKMFDDTRVKKPTGVSLIEEDDDKLMMRYLLSSEPESR 542
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 192/448 (42%), Gaps = 59/448 (13%)
Query: 43 LRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGY 102
LR AQS + +S Y M GV PD + F VLKA + + + G HG V + G+
Sbjct: 84 LRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGF 143
Query: 103 ASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXX 162
V N+L+ + CGDL A +FD + V+W+SM + +
Sbjct: 144 VLNEY-VKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAK------------ 190
Query: 163 XXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLG 222
+D L D + QV W N ++T K
Sbjct: 191 ---RGKIDEA-----------MRLFDEMPYKDQVA--------W-----NVMITGCLKCK 223
Query: 223 RIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALP 282
+D A+ LF F +KD+V+WN +IS +EAL M +G PD VT+ S L
Sbjct: 224 EMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLS 283
Query: 283 ACSHLEMLRTGKEIHGYALRNTDLIDNSFVGS----ALVDMYCNCKKADKGRWVFDGILR 338
AC+ L L TGK +H Y L + + +VG+ AL+DMY C D+ VF G+
Sbjct: 284 ACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKD 343
Query: 339 RTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEG 398
R ++ WN +I G A + + +I++F EM PN T ++ AC EG
Sbjct: 344 RDLSTWNTLIVGLALHHAEG-SIEMFEEM-QRLKVWPNEVTFIGVILACSHSGRV--DEG 399
Query: 399 IHGYVVKR---GFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD-RRDIVSWNTM----- 449
+ + R E + ++DM R G++E + SM + + W T+
Sbjct: 400 RKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACK 459
Query: 450 ITGYVVCGRHDDALNLLHDMQRGQDDEY 477
I G V G++ A L M++ + +Y
Sbjct: 460 IYGNVELGKY--ANEKLLSMRKDESGDY 485
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/527 (22%), Positives = 224/527 (42%), Gaps = 113/527 (21%)
Query: 290 LRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADK-GRWVFDGILRRTVAVWNAMI 348
+RT K+IH + N + + S VG + + A K +FD I + V++ N ++
Sbjct: 25 IRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVL 84
Query: 349 AGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGF 408
G A++ ++ + L+ EM + +P+ T + +L AC + + + HG VV+ GF
Sbjct: 85 RGSAQSMKPEKTVSLYTEM-EKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGF 143
Query: 409 EKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHD 468
++YV+NAL+ ++ G + I+ +F + V+W++M +GY G+ D+A+ L +
Sbjct: 144 VLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDE 203
Query: 469 MQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGS 528
M P K + V ++ GC
Sbjct: 204 M--------------PYK-DQVAWNVMITGCL---------------------------- 220
Query: 529 ALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSN 588
KC ++ +R +FD+ ++V+TWN +I Y G +EAL +F+ M +D+
Sbjct: 221 -------KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEM---RDAG 270
Query: 589 KEIRPNEVTYIAIFAACSHSGMVDEG----LNLFHTMKANHGIEPSSDHYACLVDLLGRS 644
+ P+ VT +++ +AC+ G ++ G + + T + I + + L+D+ +
Sbjct: 271 EH--PDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKC 328
Query: 645 GRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIH------------QNLEV--------GE 684
G ++ A ++ + + + + W++L+ +H Q L+V G
Sbjct: 329 GSIDRAIEVFRGVKD--RDLSTWNTLIVGLALHHAEGSIEMFEEMQRLKVWPNEVTFIGV 386
Query: 685 IAA-----------------KQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEM 727
I A + + +EPN+ HY + ++ AG ++A + MK
Sbjct: 387 ILACSHSGRVDEGRKYFSLMRDMYNIEPNI-KHYGCMVDMLGRAGQLEEAFMFVESMK-- 443
Query: 728 GVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKE 774
IE V + L G + EL +Y L MRK+
Sbjct: 444 ----------IEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKD 480
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 124/318 (38%), Gaps = 70/318 (22%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVA--- 110
+A+ + M AG PD ++L A A + DL GK++H ++ + S+S+ V
Sbjct: 258 EALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPI 317
Query: 111 -NSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNV 169
N+L++MY KCG + A VF + DRD +WN++I V
Sbjct: 318 WNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLA-LHHAEGSIEMFEEMQRLKV 376
Query: 170 DPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKA 229
P T + + ACS H+ GR+DE +
Sbjct: 377 WPNEVTFIGVILACS------------HS-----------------------GRVDEGRK 401
Query: 230 LFGLFDD-----KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPAC 284
F L D ++ + ++ L + + EEA +F+ M + P+ + + L AC
Sbjct: 402 YFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESM---KIEPNAIVWRTLLGAC 458
Query: 285 SHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVW 344
+I+G N +L + L+ M +K + G +V + + W
Sbjct: 459 ----------KIYG----NVEL--GKYANEKLLSM----RKDESGDYVLLSNIYASTGQW 498
Query: 345 NAMIAGYARNEFDDEAIK 362
+ + R FDD +K
Sbjct: 499 DGVQK--VRKMFDDTRVK 514
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 177/540 (32%), Positives = 278/540 (51%), Gaps = 58/540 (10%)
Query: 268 SGVRPDGVTLASALPACSHLEM-------LRTGKEIHGYALRNTDLIDNSFVGSALVDMY 320
SGV + + +L ++L + +R K+IH +L T LI ++ S ++
Sbjct: 9 SGVTVPAMPSSGSLSGNTYLRLIDTQCSTMRELKQIHA-SLIKTGLISDTVTASRVLAFC 67
Query: 321 C-NCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYES-DFTPNST 378
C + + VF I + VWN +I G++R+ F + AI +FI+M+ S P
Sbjct: 68 CASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRL 127
Query: 379 TLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMY---------------- 422
T S+ A R D +HG V+K G E D +++N ++ MY
Sbjct: 128 TYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM 187
Query: 423 ---------------SRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLH 467
++ G I+ ++++F M +R+ VSWN+MI+G+V GR DAL++
Sbjct: 188 IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFR 247
Query: 468 DMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVG 527
+MQ E D +KP+ T++++L C IH Y ++ + + V
Sbjct: 248 EMQ-------EKD----VKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVV 296
Query: 528 SALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDS 587
+ALIDMY KCGC+ VF+ P + + WN +I+ +G E A++LF +
Sbjct: 297 TALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSEL-----E 351
Query: 588 NKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRV 647
+ P+ V++I + AC+HSG V F MK + IEPS HY +V++LG +G +
Sbjct: 352 RSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLL 411
Query: 648 EEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNI 707
EEA LIK MP V WSSLL AC+ N+E+ + AAK L L+P+ YVLLSN
Sbjct: 412 EEAEALIKNMPVEEDTV-IWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNA 470
Query: 708 YSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENL 767
Y+S GL+++A++ R MKE + KE GCS IE EVH+F++ +HP+S E++ L+ L
Sbjct: 471 YASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDIL 530
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 186/412 (45%), Gaps = 67/412 (16%)
Query: 91 KQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACR 150
KQIH + K G S +V + L D+ A+ VF RI+ ++ WN++I R
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 151 --FXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNL---RDGLSLGKQVHAYTFRNG- 204
F +V P T S+ A L RDG +Q+H + G
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDG----RQLHGMVIKEGL 157
Query: 205 ----------------------DWRTFTN---------NALVTMYAKLGRIDEAKALFGL 233
WR F N+++ +AK G ID+A+ LF
Sbjct: 158 EDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDE 217
Query: 234 FDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTG 293
++ VSWN++IS +N RF++AL M + V+PDG T+ S L AC++L G
Sbjct: 218 MPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQG 277
Query: 294 KEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYAR 353
+ IH Y +RN + NS V +AL+DMYC C ++G VF+ ++ ++ WN+MI G A
Sbjct: 278 RWIHEYIVRNRFEL-NSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLAN 336
Query: 354 NEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFE---- 409
N F++ A+ LF E+ S P+S + +L AC H V R E
Sbjct: 337 NGFEERAMDLFSEL-ERSGLEPDSVSFIGVLTACA-----------HSGEVHRADEFFRL 384
Query: 410 -KDKYVQNALMDMYSRM-------GRIEISKSIFGSMD-RRDIVSWNTMITG 452
K+KY+ + Y+ M G +E ++++ +M D V W+++++
Sbjct: 385 MKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 143/327 (43%), Gaps = 43/327 (13%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAG--VPPDNFAFPAVLKAAAGVNDLNLGK 91
++P W +R ++SS AIS + +M+ + V P +P+V KA + G+
Sbjct: 87 KNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGR 146
Query: 92 QIHGHVFKFGYASTS------------------------------VAVANSLVNMYGKCG 121
Q+HG V K G S V NS++ + KCG
Sbjct: 147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCG 206
Query: 122 DLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAH 181
+ A ++FD + R+ VSWNSMI+ R +V P FT+VS+ +
Sbjct: 207 LIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLN 266
Query: 182 ACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLV 240
AC+ L G+ +H Y RN + + AL+ MY K G I+E +F K L
Sbjct: 267 ACAYL-GASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLS 325
Query: 241 SWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHL-------EMLRTG 293
WN++I L+ N E A+ + +SG+ PD V+ L AC+H E R
Sbjct: 326 CWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLM 385
Query: 294 KEIHGY--ALRNTDLIDNSFVGSALVD 318
KE + ++++ L+ N G+ L++
Sbjct: 386 KEKYMIEPSIKHYTLMVNVLGGAGLLE 412
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 282 bits (722), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 196/683 (28%), Positives = 325/683 (47%), Gaps = 112/683 (16%)
Query: 102 YASTS---VAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXX 158
Y+S+S V L+ K G +A A +FD + +RD V+W +I +
Sbjct: 38 YSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREAR 97
Query: 159 XXXXXXXXXNVDPTSFTLVSIAHACSNLRDG-LSLGKQVHAYTFRNGDWRTFTN-NALVT 216
VD + A LR LS+ + + F+ R + N ++
Sbjct: 98 ELFD-----RVDSRKNVVTWTAMVSGYLRSKQLSIAEML----FQEMPERNVVSWNTMID 148
Query: 217 MYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVT 276
YA+ GRID+A LF ++++VSWN+++ +L Q R +EA+ ++ + R D V+
Sbjct: 149 GYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAM----NLFERMPRRDVVS 204
Query: 277 LASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI 336
+A+VD K D+ R +FD +
Sbjct: 205 W------------------------------------TAMVDGLAKNGKVDEARRLFDCM 228
Query: 337 LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDK 396
R + WNAMI GYA+N DEA +LF +++ E DF +T ++
Sbjct: 229 PERNIISWNAMITGYAQNNRIDEADQLF-QVMPERDFASWNTMIT--------------- 272
Query: 397 EGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVC 456
GF +++ + A +F M ++++SW TMITGYV
Sbjct: 273 ----------GFIRNREMNKAC--------------GLFDRMPEKNVISWTTMITGYVEN 308
Query: 457 GRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYAL 516
+++ALN+ M R D S+ KPN T +++L C +IH
Sbjct: 309 KENEEALNVFSKMLR--------DGSV--KPNVGTYVSILSACSDLAGLVEGQQIHQLIS 358
Query: 517 KQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQ--MPTRNVITWNVLIMAYGMHGKGEEA 574
K + V SAL++MY+K G L +R +FD + R++I+WN +I Y HG G+EA
Sbjct: 359 KSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEA 418
Query: 575 LELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHY 634
+E++ +M +P+ VTY+ + ACSH+G+V++G+ F + + + +HY
Sbjct: 419 IEMYNQM-----RKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHY 473
Query: 635 ACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLE 694
CLVDL GR+GR+++ I + + + + ++L AC +H + + + K++L
Sbjct: 474 TCLVDLCGRAGRLKDVTNFINCDDARLSR-SFYGAILSACNVHNEVSIAKEVVKKVLETG 532
Query: 695 PNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASH 754
+ A YVL+SNIY++ G ++A ++R KMKE G++K+PGCSW++ + H F+ GD SH
Sbjct: 533 SDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSH 592
Query: 755 PQSKELHEYLENLLQRMRKEGYV 777
PQ + L L +L +MRK V
Sbjct: 593 PQFEALDSILSDLRNKMRKNKNV 615
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Query: 54 QAISTYANMVAAG-VPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANS 112
+A++ ++ M+ G V P+ + ++L A + + L G+QIH + K + + V ++
Sbjct: 313 EALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEI-VTSA 371
Query: 113 LVNMYGKCGDLAGAHHVFDR--ISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD 170
L+NMY K G+L A +FD + RD +SWNSMIA
Sbjct: 372 LLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFK 431
Query: 171 PTSFTLVSIAHACS 184
P++ T +++ ACS
Sbjct: 432 PSAVTYLNLLFACS 445
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/501 (33%), Positives = 256/501 (51%), Gaps = 23/501 (4%)
Query: 241 SWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYA 300
S+NT++SS + D+ + + +G PD T AC +R GK+IHG
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 301 LRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEA 360
+ D+ +V ++LV Y C ++ VF + R V W +I G+ R EA
Sbjct: 133 TK-MGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEA 191
Query: 361 IKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMD 420
+ F +M D PN T +L + R +GIHG ++KR NAL+D
Sbjct: 192 LDTFSKM----DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALID 247
Query: 421 MYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDD 480
MY + ++ + +FG ++++D VSWN+MI+G V C R +A++L MQ
Sbjct: 248 MYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQ---------- 297
Query: 481 ESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCL 540
S +KP+ L +VL C +H Y L + D +G+A++DMYAKCG +
Sbjct: 298 TSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYI 357
Query: 541 NLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIA 600
+ +F+ + ++NV TWN L+ +HG G E+L F MV +PN VT++A
Sbjct: 358 ETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMV-----KLGFKPNLVTFLA 412
Query: 601 IFAACSHSGMVDEGLNLFHTMKA-NHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPS 659
AC H+G+VDEG FH MK+ + + P +HY C++DLL R+G ++EA +L+K MP
Sbjct: 413 ALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPV 472
Query: 660 NMKKVDAWSSLLGACKIHQNL-EVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAM 718
V ++L ACK L E+ + L +E + YVLLSNI+++ WD
Sbjct: 473 K-PDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVA 531
Query: 719 DIRKKMKEMGVRKEPGCSWIE 739
IR+ MK G+ K PG S+IE
Sbjct: 532 RIRRLMKVKGISKVPGSSYIE 552
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/361 (35%), Positives = 180/361 (49%), Gaps = 19/361 (5%)
Query: 55 AISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLV 114
I Y V+ G PD F FP V KA + + GKQIHG V K G+ + V NSLV
Sbjct: 90 TIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYD-DIYVQNSLV 148
Query: 115 NMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSF 174
+ YG CG+ A VF + RD VSW +I F +V+P
Sbjct: 149 HFYGVCGESRNACKVFGEMPVRDVVSWTGIITG---FTRTGLYKEALDTFSKMDVEPNLA 205
Query: 175 TLVSIAHACSNLRDG-LSLGKQVHAYTFRNGDWRTF-TNNALVTMYAKLGRIDEAKALFG 232
T V + S+ R G LSLGK +H + + T NAL+ MY K ++ +A +FG
Sbjct: 206 TYVCV--LVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFG 263
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEAL-LFLYHMLQSGVRPDGVTLASALPACSHLEMLR 291
+ KD VSWN++IS L +R +EA+ LF SG++PDG L S L AC+ L +
Sbjct: 264 ELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVD 323
Query: 292 TGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGY 351
G+ +H Y L + ++ +G+A+VDMY C + +F+GI + V WNA++ G
Sbjct: 324 HGRWVHEYIL-TAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGL 382
Query: 352 ARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKD 411
A + E+++ F EMV + F PN T + L AC C L EG +R F K
Sbjct: 383 AIHGHGLESLRYFEEMV-KLGFKPNLVTFLAALNAC--CHTGLVDEG------RRYFHKM 433
Query: 412 K 412
K
Sbjct: 434 K 434
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 171/394 (43%), Gaps = 19/394 (4%)
Query: 109 VANSLVNMYGKCGDLAGAHHVF--DRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXX 166
+ N +V GK D A V S S+N+++++
Sbjct: 40 IINKVVTFLGKSADFASYSSVILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVS 99
Query: 167 XNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWR-TFTNNALVTMYAKLGRID 225
P FT + AC G+ GKQ+H + G + + N+LV Y G
Sbjct: 100 NGFSPDMFTFPPVFKACGKF-SGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESR 158
Query: 226 EAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACS 285
A +FG +D+VSW +I+ ++ ++EAL M V P+ T L +
Sbjct: 159 NACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSG 215
Query: 286 HLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWN 345
+ L GK IHG L+ LI G+AL+DMY C++ VF + ++ WN
Sbjct: 216 RVGCLSLGKGIHGLILKRASLISLE-TGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWN 274
Query: 346 AMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVK 405
+MI+G E EAI LF M S P+ L+S+L AC A +H Y++
Sbjct: 275 SMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILT 334
Query: 406 RGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNL 465
G + D ++ A++DMY++ G IE + IF + +++ +WN ++ G + G ++L
Sbjct: 335 AGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRY 394
Query: 466 LHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
+M + + KPN VT + L C
Sbjct: 395 FEEMVK-----------LGFKPNLVTFLAALNAC 417
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 138/299 (46%), Gaps = 8/299 (2%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R +W + ++ + +A+ T++ M V P+ + VL ++ V L+LGK I
Sbjct: 170 RDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGI 226
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
HG + K + S+ N+L++MY KC L+ A VF + +D VSWNSMI+
Sbjct: 227 HGLILKRA-SLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCER 285
Query: 154 XXXXX-XXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTN 211
+ P L S+ AC++L + G+ VH Y G W T
Sbjct: 286 SKEAIDLFSLMQTSSGIKPDGHILTSVLSACASL-GAVDHGRWVHEYILTAGIKWDTHIG 344
Query: 212 NALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVR 271
A+V MYAK G I+ A +F K++ +WN ++ L+ + E+L + M++ G +
Sbjct: 345 TAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFK 404
Query: 272 PDGVTLASALPACSHLEMLRTGKE-IHGYALRNTDLIDNSFVGSALVDMYCNCKKADKG 329
P+ VT +AL AC H ++ G+ H R +L ++D+ C D+
Sbjct: 405 PNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEA 463
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 169/559 (30%), Positives = 285/559 (50%), Gaps = 31/559 (5%)
Query: 188 DGLSLGKQVHAYTFRNGDWRT-FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVI 246
D LS KQ H + + G + + F N L+ Y K+ D+A LF +++V+WN +I
Sbjct: 50 DHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILI 109
Query: 247 SSLSQND-----RFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYAL 301
+ Q D R +L +L + V D V+ + C+ ++ G ++H +
Sbjct: 110 HGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMV 169
Query: 302 RNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAI 361
+ L + F ++LV Y C + R VF+ +L R + +WNA+++ Y N DEA
Sbjct: 170 KQ-GLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAF 228
Query: 362 KLFIEMVYESD-FTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMD 420
L M + + F + T SSLL AC + IH + K ++ D V AL++
Sbjct: 229 GLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLN 284
Query: 421 MYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDD 480
MY++ + ++ F SM R++VSWN MI G+ G +A+ L M
Sbjct: 285 MYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLEN------- 337
Query: 481 ESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCL 540
L+P+ +T +VL C ++ A K+ A ++V ++LI Y++ G L
Sbjct: 338 ----LQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNL 393
Query: 541 NLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIA 600
+ + + F + ++++W +I A HG EE+L++F M+ ++++P+++T++
Sbjct: 394 SEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESML------QKLQPDKITFLE 447
Query: 601 IFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSN 660
+ +ACSH G+V EGL F M + IE +HY CL+DLLGR+G ++EA ++ +MP+
Sbjct: 448 VLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTE 507
Query: 661 MKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDI 720
A ++ G C IH+ E + AK+LL +EP +Y +LSN Y S G W+QA +
Sbjct: 508 -PSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALL 566
Query: 721 RKKMKEMGVR-KEPGCSWI 738
RK+ + K PGCSW+
Sbjct: 567 RKRERRNCYNPKTPGCSWL 585
Score = 162 bits (410), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/486 (26%), Positives = 222/486 (45%), Gaps = 35/486 (7%)
Query: 79 KAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDH 138
K +A ++ L+ KQ HG + K G + S+ + N L+ Y K + A +FD + R+
Sbjct: 44 KLSASLDHLSDVKQEHGFMVKQGIYN-SLFLQNKLLQAYTKIREFDDADKLFDEMPLRNI 102
Query: 139 VSWNSMIAAACRFXXXXXXXX-------XXXXXXXXNVDPTSFT-LVSIAHACSNLRDGL 190
V+WN +I + ++D SF L+ + +N++ G+
Sbjct: 103 VTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGI 162
Query: 191 SLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSL 249
Q+H + G + F + +LV Y K G I EA+ +F D+DLV WN ++SS
Sbjct: 163 ----QLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSY 218
Query: 250 SQNDRFEEA--LLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLI 307
N +EA LL L ++ R D T +S L AC + GK+IH + +
Sbjct: 219 VLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQF 274
Query: 308 DNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEM 367
D V +AL++MY R F+ ++ R V WNAMI G+A+N EA++LF +M
Sbjct: 275 DIP-VATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQM 333
Query: 368 VYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGR 427
+ E + P+ T +S+L +C + A + + + V K+G V N+L+ YSR G
Sbjct: 334 LLE-NLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGN 392
Query: 428 IEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKP 487
+ + F S+ D+VSW ++I G +++L + M + L+P
Sbjct: 393 LSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQ------------KLQP 440
Query: 488 NSVTLMTVLPGCXXXXXXXXXXEIHAYALK-QKLATDIAVGSALIDMYAKCGCLNLSRIV 546
+ +T + VL C + K+ + + LID+ + G ++ + V
Sbjct: 441 DKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDV 500
Query: 547 FDQMPT 552
+ MPT
Sbjct: 501 LNSMPT 506
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 167/381 (43%), Gaps = 23/381 (6%)
Query: 67 VPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGA 126
V D+ +F +++ ++ G Q+H + K G S+ + SLV+ YGKCG + A
Sbjct: 138 VSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFP-STSLVHFYGKCGLIVEA 196
Query: 127 HHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS-----FTLVSIAH 181
VF+ + DRD V WN+++++ + D FT S+
Sbjct: 197 RRVFEAVLDRDLVLWNALVSS---YVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLS 253
Query: 182 ACSNLRDGLSLGKQVHAYTFR-NGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLV 240
AC + GKQ+HA F+ + + AL+ MYAK + +A+ F +++V
Sbjct: 254 ACR-----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVV 308
Query: 241 SWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYA 300
SWN +I +QN EA+ ML ++PD +T AS L +C+ + K++
Sbjct: 309 SWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMV 368
Query: 301 LRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEA 360
+ D V ++L+ Y + F I + W ++I A + F +E+
Sbjct: 369 TKKGS-ADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEES 427
Query: 361 IKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGF---EKDKYVQNA 417
+++F M+ + P+ T +L AC L +EG+ + F E +
Sbjct: 428 LQMFESMLQK--LQPDKITFLEVLSAC--SHGGLVQEGLRCFKRMTEFYKIEAEDEHYTC 483
Query: 418 LMDMYSRMGRIEISKSIFGSM 438
L+D+ R G I+ + + SM
Sbjct: 484 LIDLLGRAGFIDEASDVLNSM 504
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 7/184 (3%)
Query: 47 AQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTS 106
AQ+ +A+ + M+ + PD F +VL + A + + KQ+ V K G A
Sbjct: 318 AQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADF- 376
Query: 107 VAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXX 166
++VANSL++ Y + G+L+ A F I + D VSW S+I A
Sbjct: 377 LSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALAS-HGFAEESLQMFESML 435
Query: 167 XNVDPTSFTLVSIAHACSN---LRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGR 223
+ P T + + ACS+ +++GL K++ + + +T L+ + + G
Sbjct: 436 QKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYT--CLIDLLGRAGF 493
Query: 224 IDEA 227
IDEA
Sbjct: 494 IDEA 497
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 280 bits (716), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 183/600 (30%), Positives = 307/600 (51%), Gaps = 50/600 (8%)
Query: 170 DPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDW-RTFTNNALVTMYAKLGRIDEAK 228
P FT + +C+ L D + G+ +HA + G + FT ALV+MY K+ ++ +A
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQ-GRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDAL 86
Query: 229 ALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLE 288
+ ++ + S N +S L +N +A SG + VT+AS L C +E
Sbjct: 87 KVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIE 146
Query: 289 MLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWV-----FDGILRRTVAV 343
G ++H A+++ ++ +VG++LV MY C G WV F+ + ++V
Sbjct: 147 ---GGMQLHCLAMKSGFEME-VYVGTSLVSMYSRC-----GEWVLAARMFEKVPHKSVVT 197
Query: 344 WNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYV 403
+NA I+G N + +F M S PN T + + AC +HG V
Sbjct: 198 YNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLV 257
Query: 404 VKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSM-DRRDIVSWNTMITGYVVCGRHDDA 462
+K+ F+ + V AL+DMYS+ + + +F + D R+++SWN++I+G ++ G+H+ A
Sbjct: 258 MKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETA 317
Query: 463 LNLLHDM--------------------QRGQDDE----YEDDESIPLKPNSVTLMTVLPG 498
+ L + Q G+ E +E S+ + P+ L ++L
Sbjct: 318 VELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSA 377
Query: 499 CXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQM--PTRNVI 556
C EIH + +K DI V ++LIDMY KCG + +R +FD+ ++ +
Sbjct: 378 CSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPV 437
Query: 557 TWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLN 616
WNV+I YG HG+ E A+E+F + EK + P+ T+ A+ +ACSH G V++G
Sbjct: 438 FWNVMISGYGKHGECESAIEIFELLREEK-----VEPSLATFTAVLSACSHCGNVEKGSQ 492
Query: 617 LFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKI 676
+F M+ +G +PS++H C++DLLGRSGR+ EA ++I M V + SLLG+C+
Sbjct: 493 IFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYS--SLLGSCRQ 550
Query: 677 HQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCS 736
H + +GE AA +L LEP + +V+LS+IY++ W+ IR+ + + + K PG S
Sbjct: 551 HLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 176/404 (43%), Gaps = 45/404 (11%)
Query: 76 AVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISD 135
V G D+ G Q+H K G+ V V SLV+MY +CG+ A +F+++
Sbjct: 134 TVASVLGGCGDIEGGMQLHCLAMKSGF-EMEVYVGTSLVSMYSRCGEWVLAARMFEKVPH 192
Query: 136 RDHVSWNSMIAAACR-FXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGK 194
+ V++N+ I+ + +P T V+ AC++L + L G+
Sbjct: 193 KSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLN-LQYGR 251
Query: 195 QVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFG-LFDDKDLVSWNTVISSLSQN 252
Q+H + + T AL+ MY+K A +F L D ++L+SWN+VIS + N
Sbjct: 252 QLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMIN 311
Query: 253 DRFEEALLFLYHMLQSGVRPDGVT-----------------------------------L 277
+ E A+ + G++PD T L
Sbjct: 312 GQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCL 371
Query: 278 ASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGIL 337
S L ACS + L+ GKEIHG+ ++ D FV ++L+DMY C + R +FD
Sbjct: 372 TSLLSACSDIWTLKNGKEIHGHVIKAAAERD-IFVLTSLIDMYMKCGLSSWARRIFDRFE 430
Query: 338 RRT--VAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLD 395
+ WN MI+GY ++ + AI++F E++ E P+ T +++L AC C
Sbjct: 431 PKPKDPVFWNVMISGYGKHGECESAIEIF-ELLREEKVEPSLATFTAVLSACSHCGNVEK 489
Query: 396 KEGIHGYVVKR-GFEKDKYVQNALMDMYSRMGRIEISKSIFGSM 438
I + + G++ ++D+ R GR+ +K + M
Sbjct: 490 GSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 109/267 (40%), Gaps = 41/267 (15%)
Query: 69 PDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHH 128
P++ F + A A + +L G+Q+HG V K + ++ V +L++MY KC A+
Sbjct: 229 PNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETM-VGTALIDMYSKCRCWKSAYI 287
Query: 129 VFDRISD-RDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFT------------ 175
VF + D R+ +SWNS+I+ + P S T
Sbjct: 288 VFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLG 347
Query: 176 -----------------------LVSIAHACSNLRDGLSLGKQVHAYTFRNGDWR-TFTN 211
L S+ ACS++ L GK++H + + R F
Sbjct: 348 KVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWT-LKNGKEIHGHVIKAAAERDIFVL 406
Query: 212 NALVTMYAKLGRIDEAKALFGLFD--DKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSG 269
+L+ MY K G A+ +F F+ KD V WN +IS ++ E A+ + +
Sbjct: 407 TSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEK 466
Query: 270 VRPDGVTLASALPACSHLEMLRTGKEI 296
V P T + L ACSH + G +I
Sbjct: 467 VEPSLATFTAVLSACSHCGNVEKGSQI 493
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 6/196 (3%)
Query: 37 SAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGH 96
+ W + +Q ++A + M++ + P ++L A + + L GK+IHGH
Sbjct: 334 ATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGH 393
Query: 97 VFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRIS--DRDHVSWNSMIAAACRFXXX 154
V K A + V SL++MY KCG + A +FDR +D V WN MI+ +
Sbjct: 394 VIK-AAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGEC 452
Query: 155 XXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNN-- 212
V+P+ T ++ ACS+ + + G Q+ ++ T +
Sbjct: 453 ESAIEIFELLREEKVEPSLATFTAVLSACSHCGN-VEKGSQIFRLMQEEYGYKPSTEHIG 511
Query: 213 ALVTMYAKLGRIDEAK 228
++ + + GR+ EAK
Sbjct: 512 CMIDLLGRSGRLREAK 527
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 275 bits (703), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 266/511 (52%), Gaps = 49/511 (9%)
Query: 294 KEIHGYALRN-----TDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMI 348
K++H + LR DL+ + LV R +FD ++N +I
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLIPNLV----------YARKLFDHHQNSCTFLYNKLI 54
Query: 349 AGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGF 408
Y + E+I L+ + ++ P+ T + + A + +H + GF
Sbjct: 55 QAYYVHHQPHESIVLYNLLSFDG-LRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGF 113
Query: 409 EKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHD 468
E D + L+ Y+++G + ++ +F M +RD+ WN MITGY G A+ L
Sbjct: 114 ESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDS 173
Query: 469 MQR-------------GQDDEY----------EDDESIPLKPNSVTLMTVLPGCXXXXXX 505
M R Q+ Y E D+S+ KPN +T+++VLP C
Sbjct: 174 MPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSV--KPNHITVVSVLPACANLGEL 231
Query: 506 XXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPT-RNVITWNVLIMA 564
+ YA + +I V +A I+MY+KCG +++++ +F+++ RN+ +WN +I +
Sbjct: 232 EIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGS 291
Query: 565 YGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKAN 624
HGK +EAL LF +M+ E + +P+ VT++ + AC H GMV +G LF +M+
Sbjct: 292 LATHGKHDEALTLFAQMLREGE-----KPDAVTFVGLLLACVHGGMVVKGQELFKSMEEV 346
Query: 625 HGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGE 684
H I P +HY C++DLLGR G+++EAY LIKTMP V W +LLGAC H N+E+ E
Sbjct: 347 HKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAV-VWGTLLGACSFHGNVEIAE 405
Query: 685 IAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSW-IEHRDE 743
IA++ L LEP + V++SNIY++ WD + +RK MK+ + K G S+ +E +
Sbjct: 406 IASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVD 465
Query: 744 VHKFLAGDASHPQSKELHEYLENLLQRMRKE 774
VHKF D SHP+S E+++ LE + +RM+ E
Sbjct: 466 VHKFTVEDKSHPRSYEIYQVLEEIFRRMKLE 496
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 179/416 (43%), Gaps = 51/416 (12%)
Query: 194 KQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQND 253
KQ+HA+ R G T L+ + + A+ LF + +N +I + +
Sbjct: 5 KQLHAHCLRTGVDET---KDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHH 61
Query: 254 RFEEALLFLYHMLQ-SGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFV 312
+ E+++ LY++L G+RP T A + R + +H R + +SF
Sbjct: 62 QPHESIV-LYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFR-SGFESDSFC 119
Query: 313 GSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNE--------FD------- 357
+ L+ Y R VFD + +R V VWNAMI GY R FD
Sbjct: 120 CTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNV 179
Query: 358 ----------------DEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHG 401
EA+K+F+ M + PN T+ S+LPAC + G
Sbjct: 180 TSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEG 239
Query: 402 YVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSM-DRRDIVSWNTMITGYVVCGRHD 460
Y + GF + YV NA ++MYS+ G I+++K +F + ++R++ SWN+MI G+HD
Sbjct: 240 YARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHD 299
Query: 461 DALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALK-QK 519
+AL L M R + KP++VT + +L C E+ + K
Sbjct: 300 EALTLFAQMLREGE-----------KPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHK 348
Query: 520 LATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR-NVITWNVLIMAYGMHGKGEEA 574
++ + +ID+ + G L + + MP + + + W L+ A HG E A
Sbjct: 349 ISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 123/277 (44%), Gaps = 36/277 (12%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
++I Y + G+ P + F + A+A + + +H F+ G+ S S +L
Sbjct: 65 ESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFC-CTTL 123
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNV---- 169
+ Y K G L A VFD +S RD WN+MI R NV
Sbjct: 124 ITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWT 183
Query: 170 ----------------------------DPTSFTLVSIAHACSNLRDGLSLGKQVHAYTF 201
P T+VS+ AC+NL + L +G+++ Y
Sbjct: 184 TVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGE-LEIGRRLEGYAR 242
Query: 202 RNGDW-RTFTNNALVTMYAKLGRIDEAKALFG-LFDDKDLVSWNTVISSLSQNDRFEEAL 259
NG + + NA + MY+K G ID AK LF L + ++L SWN++I SL+ + + +EAL
Sbjct: 243 ENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEAL 302
Query: 260 LFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEI 296
ML+ G +PD VT L AC H M+ G+E+
Sbjct: 303 TLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQEL 339
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 158/465 (33%), Positives = 249/465 (53%), Gaps = 31/465 (6%)
Query: 340 TVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEG- 398
T W + I RN EA K F +M + PN T +LL C + + G
Sbjct: 35 TTVSWTSRINLLTRNGRLAEAAKEFSDMTL-AGVEPNHITFIALLSGCGDFTSGSEALGD 93
Query: 399 -IHGYVVKRGFEKDK-YVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVC 456
+HGY K G +++ V A++ MYS+ GR + ++ +F M+ ++ V+WNTMI GY+
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 457 GRHDDALNLLHDM----------------QRGQDDE----YEDDESIPLKPNSVTLMTVL 496
G+ D+A + M ++G +E + + + +KP+ V ++ L
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 497 PGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVI 556
C +H Y L Q ++ V ++LID+Y +CGC+ +R VF M R V+
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 557 TWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLN 616
+WN +I+ + +G E+L FR+M K +P+ VT+ ACSH G+V+EGL
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKM-----QEKGFKPDAVTFTGALTACSHVGLVEEGLR 328
Query: 617 LFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKI 676
F MK ++ I P +HY CLVDL R+GR+E+A KL+++MP +V SLL AC
Sbjct: 329 YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEV-VIGSLLAACSN 387
Query: 677 H-QNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGC 735
H N+ + E K L L S+YV+LSN+Y++ G W+ A +R+KMK +G++K+PG
Sbjct: 388 HGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGF 447
Query: 736 SWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDT 780
S IE D +H F+AGD +H ++ + E LE + +R +G V +T
Sbjct: 448 SSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 171/398 (42%), Gaps = 86/398 (21%)
Query: 139 VSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGL-SLGKQVH 197
VSW S I R V+P T +++ C + G +LG +H
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 198 AYTFRNGDWR--TFTNNALVTMYAKLGRIDEAKALFGLFDDK------------------ 237
Y + G R A++ MY+K GR +A+ +F +DK
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 238 -------------DLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPAC 284
DL+SW +I+ + EEALL+ M SGV+PD V + +AL AC
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 285 SHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVW 344
++L L G +H Y L + D +N V ++L+D+YC C + R VF + +RTV W
Sbjct: 217 TNLGALSFGLWVHRYVL-SQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSW 275
Query: 345 NAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGY-V 403
N++I G+A N E++ F +M E F P++ T + L AC L +EG+ + +
Sbjct: 276 NSVIVGFAANGNAHESLVYFRKM-QEKGFKPDAVTFTGALTACSHVG--LVEEGLRYFQI 332
Query: 404 VKRGFEKDKYVQN--ALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDD 461
+K + +++ L+D+YSR GR+E D
Sbjct: 333 MKCDYRISPRIEHYGCLVDLYSRAGRLE-------------------------------D 361
Query: 462 ALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
AL L+ +S+P+KPN V + ++L C
Sbjct: 362 ALKLV--------------QSMPMKPNEVVIGSLLAAC 385
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 194/470 (41%), Gaps = 95/470 (20%)
Query: 240 VSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPAC----SHLEMLRTGKE 295
VSW + I+ L++N R EA M +GV P+ +T + L C S E L G
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEAL--GDL 94
Query: 296 IHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNE 355
+HGYA + ++ VG+A++ MY + K R VFD + + WN MI GY R+
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 356 FDDEAIKLFIEM------------------------------VYESDFTPNSTTLSSLLP 385
D A K+F +M + S P+ + + L
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 386 ACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVS 445
AC A +H YV+ + F+ + V N+L+D+Y R G +E ++ +F +M++R +VS
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVS 274
Query: 446 WNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXX 505
WN++I G+ G ++L MQ KP++VT L C
Sbjct: 275 WNSVIVGFAANGNAHESLVYFRKMQEK-----------GFKPDAVTFTGALTACSHVGLV 323
Query: 506 XXXXE-IHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMA 564
+++ I L+D+Y++ G L
Sbjct: 324 EEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRL------------------------ 359
Query: 565 YGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSG---MVDEGLNLFHTM 621
E+AL+L + M ++PNEV ++ AACS+ G ++ E L + H
Sbjct: 360 -------EDALKLVQSM--------PMKPNEVVIGSLLAACSNHGNNIVLAERL-MKHLT 403
Query: 622 KANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPS-NMKKVDAWSSL 670
N S +Y L ++ G+ E A K+ + M +KK +SS+
Sbjct: 404 DLN---VKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSI 450
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 158/390 (40%), Gaps = 82/390 (21%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLN-----LGKQ 92
+W + L ++ +A +++M AGV P++ F A+L +G D LG
Sbjct: 38 SWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALL---SGCGDFTSGSEALGDL 94
Query: 93 IHGHVFKFGYASTSVAVANSLVNMYGK-------------------------------CG 121
+HG+ K G V V +++ MY K G
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 122 DLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAH 181
+ A +FD++ +RD +SW +MI + V P +++ +
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 182 ACSNLRDGLSLGKQVHAYT----FRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDK 237
AC+NL LS G VH Y F+N +N+L+ +Y + G ++ A+ +F + +
Sbjct: 215 ACTNL-GALSFGLWVHRYVLSQDFKN---NVRVSNSLIDLYCRCGCVEFARQVFYNMEKR 270
Query: 238 DLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIH 297
+VSWN+VI + N E+L++ M + G +PD VT AL ACSH+ ++ G
Sbjct: 271 TVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG---- 326
Query: 298 GYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFD 357
LR ++ + S ++ Y ++ Y+R
Sbjct: 327 ---LRYFQIMKCDYRISPRIEHY------------------------GCLVDLYSRAGRL 359
Query: 358 DEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
++A+KL M PN + SLL AC
Sbjct: 360 EDALKLVQSM----PMKPNEVVIGSLLAAC 385
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 274 bits (701), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 151/415 (36%), Positives = 231/415 (55%), Gaps = 28/415 (6%)
Query: 375 PNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSI 434
P++ T +L VR IHG VV GF+ +V L+ MY G + ++ +
Sbjct: 114 PDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKM 173
Query: 435 FGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQ-------------RGQDDEYEDDE 481
F M +D+ WN ++ GY G D+A +LL M G E
Sbjct: 174 FDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASE 233
Query: 482 SIPL---------KPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALID 532
+I + +P+ VTL+ VL C I +Y + + +++ +A+ID
Sbjct: 234 AIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVID 293
Query: 533 MYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIR 592
MYAK G + + VF+ + RNV+TW +I HG G EAL +F RMV +R
Sbjct: 294 MYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAG-----VR 348
Query: 593 PNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYK 652
PN+VT+IAI +ACSH G VD G LF++M++ +GI P+ +HY C++DLLGR+G++ EA +
Sbjct: 349 PNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADE 408
Query: 653 LIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAG 712
+IK+MP W SLL A +H +LE+GE A +L+ LEPN + +Y+LL+N+YS+ G
Sbjct: 409 VIKSMPFKANAA-IWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLG 467
Query: 713 LWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENL 767
WD++ +R MK +GV+K G S IE + V+KF++GD +HPQ + +HE L+ +
Sbjct: 468 RWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEM 522
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 159/346 (45%), Gaps = 37/346 (10%)
Query: 40 IDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFK 99
I L L + ++ AI+ Y + A PD F FP VLK A V+D+ G+QIHG V
Sbjct: 85 IRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVV 144
Query: 100 FGYASTSVAVANSLVNMYGKCGDLAGAHHVFDR--ISD---------------------- 135
FG+ S SV V L+ MY CG L A +FD + D
Sbjct: 145 FGFDS-SVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARS 203
Query: 136 ---------RDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNL 186
R+ VSW +I+ + NV+P TL+++ AC++L
Sbjct: 204 LLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADL 263
Query: 187 RDGLSLGKQVHAYTFRNGDWRTFT-NNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTV 245
L LG+++ +Y G R + NNA++ MYAK G I +A +F +++++V+W T+
Sbjct: 264 -GSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTI 322
Query: 246 ISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTD 305
I+ L+ + EAL M+++GVRP+ VT + L ACSH+ + GK +
Sbjct: 323 IAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYG 382
Query: 306 LIDNSFVGSALVDMYCNCKKADKGRWVFDGI-LRRTVAVWNAMIAG 350
+ N ++D+ K + V + + A+W +++A
Sbjct: 383 IHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAA 428
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 194/471 (41%), Gaps = 62/471 (13%)
Query: 194 KQVHAYTFRNGDWRTFTNNA-LVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQN 252
KQ H Y G R N A + + G + A ++F + NT+I +LS
Sbjct: 32 KQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLL 91
Query: 253 DRFEE---ALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDN 309
D A+ + +PD T L + + G++IHG + D+
Sbjct: 92 DEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVV--VFGFDS 149
Query: 310 SF-VGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYA---------------- 352
S V + L+ MY +C R +FD +L + V VWNA++AGY
Sbjct: 150 SVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMP 209
Query: 353 ---RNEFD--------------DEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLD 395
RNE EAI++F M+ E + P+ TL ++L AC +
Sbjct: 210 CWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLME-NVEPDEVTLLAVLSACADLGSLEL 268
Query: 396 KEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVV 455
E I YV RG + + NA++DMY++ G I + +F ++ R++V+W T+I G
Sbjct: 269 GERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLAT 328
Query: 456 CGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEI-HAY 514
G +AL + + M + ++PN VT + +L C + ++
Sbjct: 329 HGHGAEALAMFNRMVKA-----------GVRPNDVTFIAILSACSHVGWVDLGKRLFNSM 377
Query: 515 ALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR-NVITWNVLIMAYGMHGKGEE 573
K + +I +ID+ + G L + V MP + N W L+ A +H
Sbjct: 378 RSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVH----H 433
Query: 574 ALELFRRMVAEKDSNKEIRPNEV-TYIAIFAACSHSGMVDEGLNLFHTMKA 623
LEL R ++E ++ PN Y+ + S+ G DE + + MK
Sbjct: 434 DLELGERALSEL---IKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKG 481
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 126/313 (40%), Gaps = 53/313 (16%)
Query: 400 HGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRH 459
H Y++ G +D ++ S G + + S+F + NTMI
Sbjct: 35 HCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIR-------- 86
Query: 460 DDALNLLHD--MQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALK 517
AL+LL + Y ++ KP++ T VL +IH +
Sbjct: 87 --ALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVV 144
Query: 518 QKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYG----------- 566
+ + V + LI MY CG L +R +FD+M ++V WN L+ YG
Sbjct: 145 FGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSL 204
Query: 567 ----------------------MHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAA 604
G+ EA+E+F+RM+ E + P+EVT +A+ +A
Sbjct: 205 LEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMEN-----VEPDEVTLLAVLSA 259
Query: 605 CSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKV 664
C+ G ++ G + + + G+ + ++D+ +SG + +A + + + N + V
Sbjct: 260 CADLGSLELGERICSYVD-HRGMNRAVSLNNAVIDMYAKSGNITKALDVFECV--NERNV 316
Query: 665 DAWSSLLGACKIH 677
W++++ H
Sbjct: 317 VTWTTIIAGLATH 329
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+ +W + A+S +AI + M+ V PD AVL A A + L LG++I
Sbjct: 213 RNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERI 272
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
+V G + +V++ N++++MY K G++ A VF+ +++R+ V+W ++IA
Sbjct: 273 CSYVDHRGM-NRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGH 331
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQV 196
V P T ++I ACS++ + LGK++
Sbjct: 332 GAEALAMFNRMVKAGVRPNDVTFIAILSACSHV-GWVDLGKRL 373
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 182/658 (27%), Positives = 301/658 (45%), Gaps = 68/658 (10%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+A ++ M G P+ +L A+ D+ G Q+HG K+G V L
Sbjct: 98 KAWGVFSEMRYFGYLPNQSTVSGLLSCAS--LDVRAGTQLHGLSLKYGLFMADAFVGTCL 155
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
+ +YG+ L A VF+ + + +WN M++ T
Sbjct: 156 LCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTE 215
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFG 232
+ + + S ++D L + KQ+H + G D N+L++ Y K G A+ +F
Sbjct: 216 SSFLGVLKGVSCVKD-LDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQ 274
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRT 292
D+VSWN +I + ++++ +AL M + G P+ T S L S +++L
Sbjct: 275 DAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSC 334
Query: 293 GKEIHGYALRN---TDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIA 349
G++IHG ++N T ++ +G+AL+D Y C + R FD I + + WNA+++
Sbjct: 335 GRQIHGMLIKNGCETGIV----LGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLS 390
Query: 350 GYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFE 409
GYA N+ + LF++M+ + F P T S+ L +C + + +H +V+ G+E
Sbjct: 391 GYA-NKDGPICLSLFLQML-QMGFRPTEYTFSTALKSC----CVTELQQLHSVIVRMGYE 444
Query: 410 KDKYVQNALM--------------------------------DMYSRMGRIEISKSIFGS 437
+ YV ++LM +YSR G+ S + +
Sbjct: 445 DNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLIST 504
Query: 438 MDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLP 497
+++ D VSWN I H++ + L M + ++P+ T +++L
Sbjct: 505 LEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSN-----------IRPDKYTFVSILS 553
Query: 498 GCXXXXXXXXXXEIHAYALKQKLA-TDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVI 556
C IH K + D V + LIDMY KCG + VF++ +N+I
Sbjct: 554 LCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLI 613
Query: 557 TWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLN 616
TW LI G+HG G+EALE F+ ++ +P+ V++I+I AC H GMV EG+
Sbjct: 614 TWTALISCLGIHGYGQEALEKFKETLSLG-----FKPDRVSFISILTACRHGGMVKEGMG 668
Query: 617 LFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGAC 674
LF MK ++G+EP DHY C VDLL R+G ++EA LI+ MP W + L C
Sbjct: 669 LFQKMK-DYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFP-ADAPVWRTFLDGC 724
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/501 (26%), Positives = 222/501 (44%), Gaps = 56/501 (11%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
+S W + L + + + +V G +F VLK + V DL++ KQ+
Sbjct: 178 KSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQL 237
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
H K G ++V NSL++ YGKCG+ A +F D VSWN++I A +
Sbjct: 238 HCSATKKGL-DCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSEN 296
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNN 212
P T VS+ S+L LS G+Q+H +NG + N
Sbjct: 297 PLKALKLFVSMPEHGFSPNQGTYVSVL-GVSSLVQLLSCGRQIHGMLIKNGCETGIVLGN 355
Query: 213 ALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRP 272
AL+ YAK G +++++ F DK++V WN ++S + D LFL MLQ G RP
Sbjct: 356 ALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFL-QMLQMGFRP 414
Query: 273 DGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWV 332
T ++AL +C E+ +++H +R DN +V S+L+ Y + + +
Sbjct: 415 TEYTFSTALKSCCVTEL----QQLHSVIVR-MGYEDNDYVLSSLMRSYAKNQLMNDALLL 469
Query: 333 FD---------------GILRR------------------TVAVWNAMIAGYARNEFDDE 359
D GI R TV+ WN IA +R+++ +E
Sbjct: 470 LDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVS-WNIAIAACSRSDYHEE 528
Query: 360 AIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFE-KDKYVQNAL 418
I+LF M+ +S+ P+ T S+L C + IHG + K F D +V N L
Sbjct: 529 VIELFKHML-QSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVL 587
Query: 419 MDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYE 478
+DMY + G I +F +++++W +I+ + G +AL ++++
Sbjct: 588 IDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEAL-----------EKFK 636
Query: 479 DDESIPLKPNSVTLMTVLPGC 499
+ S+ KP+ V+ +++L C
Sbjct: 637 ETLSLGFKPDRVSFISILTAC 657
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 159/669 (23%), Positives = 288/669 (43%), Gaps = 79/669 (11%)
Query: 107 VAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXX 166
V V N+++++Y K G+++ A VFD++ +R+ VS+N++I ++
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 167 XNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWR--TFTNNALVTMYAKLGRI 224
P T VS +C++L + G Q+H + + G + F L+ +Y +L +
Sbjct: 109 FGYLPNQST-VSGLLSCASL--DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLL 165
Query: 225 DEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPAC 284
+ A+ +F K L +WN ++S L +E + F +++ G + L
Sbjct: 166 EMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGV 225
Query: 285 SHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVW 344
S ++ L K++H A + + S V S L+ Y C +F + W
Sbjct: 226 SCVKDLDISKQLHCSATKKGLDCEISVVNS-LISAYGKCGNTHMAERMFQDAGSWDIVSW 284
Query: 345 NAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVV 404
NA+I A++E +A+KLF+ M E F+PN T S+L + IHG ++
Sbjct: 285 NAIICATAKSENPLKALKLFVSMP-EHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLI 343
Query: 405 KRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALN 464
K G E + NAL+D Y++ G +E S+ F + ++IV WN +++GY D +
Sbjct: 344 KNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGY---ANKDGPIC 400
Query: 465 LLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDI 524
L +Q Q + +P T T L C ++H+ ++ +
Sbjct: 401 LSLFLQMLQ---------MGFRPTEYTFSTALKSC----CVTELQQLHSVIVRMGYEDND 447
Query: 525 AVGSALIDMYAKCGCLNLSRIVFD--QMPTRNV--------------------------- 555
V S+L+ YAK +N + ++ D PT V
Sbjct: 448 YVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQ 507
Query: 556 ---ITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVD 612
++WN+ I A EE +ELF+ M+ IRP++ T+++I + CS +
Sbjct: 508 PDTVSWNIAIAACSRSDYHEEVIELFKHML-----QSNIRPDKYTFVSILSLCSKLCDLT 562
Query: 613 EGLNLFHTMKANHGIEPSSDH-----YAC--LVDLLGRSGRVEEAYKLIKTMPSNMKKVD 665
G ++ HG+ +D + C L+D+ G+ G + K+ + + K +
Sbjct: 563 LGSSI-------HGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFE--ETREKNLI 613
Query: 666 AWSSLLGACKIHQNLEVGEIAAKQLLVL--EPNVASHYVLLSNIYSSAGLWDQAMDIRKK 723
W++L+ IH + K+ L L +P+ S +L+ G+ + M + +K
Sbjct: 614 TWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTAC-RHGGMVKEGMGLFQK 672
Query: 724 MKEMGVRKE 732
MK+ GV E
Sbjct: 673 MKDYGVEPE 681
Score = 153 bits (386), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 196/449 (43%), Gaps = 42/449 (9%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W + A+S + L+A+ + +M G P+ + +VL ++ V L+ G+QIHG +
Sbjct: 283 SWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGML 342
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
K G T + + N+L++ Y KCG+L + FD I D++ V WN++++
Sbjct: 343 IKNG-CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN-KDGPIC 400
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG----DW------R 207
PT +T + +C ++ +Q+H+ R G D+ R
Sbjct: 401 LSLFLQMLQMGFRPTEYTFSTALKSCC-----VTELQQLHSVIVRMGYEDNDYVLSSLMR 455
Query: 208 TFTNNALVT-----------------------MYAKLGRIDEAKALFGLFDDKDLVSWNT 244
++ N L+ +Y++ G+ E+ L + D VSWN
Sbjct: 456 SYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNI 515
Query: 245 VISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNT 304
I++ S++D EE + HMLQS +RPD T S L CS L L G IHG +
Sbjct: 516 AIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTD 575
Query: 305 DLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLF 364
++FV + L+DMY C VF+ + + W A+I+ + + EA++ F
Sbjct: 576 FSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKF 635
Query: 365 IEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSR 424
E + F P+ + S+L AC + G+ + G E + +D+ +R
Sbjct: 636 KETL-SLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLAR 694
Query: 425 MGRIEISKSIFGSMD-RRDIVSWNTMITG 452
G ++ ++ + M D W T + G
Sbjct: 695 NGYLKEAEHLIREMPFPADAPVWRTFLDG 723
Score = 106 bits (265), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 175/399 (43%), Gaps = 28/399 (7%)
Query: 277 LASALPACSHLEMLRTGKEIHGYALR-NTDLIDNSFVGSALVDMYCNCKKADKGRWVFDG 335
+ S L C K +H ++ + L+ +V + ++ +Y + VFD
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 336 ILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLD 395
+ R +N +I GY++ D+A +F EM Y + PN +T+S LL C +
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFG-YLPNQSTVSGLLS----CASLDV 129
Query: 396 KEG--IHGYVVKRG-FEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITG 452
+ G +HG +K G F D +V L+ +Y R+ +E+++ +F M + + +WN M++
Sbjct: 130 RAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSL 189
Query: 453 YVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIH 512
G + + ++ R E + + VL G ++H
Sbjct: 190 LGHRGFLKECMFFFRELVRMGASLTES-----------SFLGVLKGVSCVKDLDISKQLH 238
Query: 513 AYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGE 572
A K+ L +I+V ++LI Y KCG +++ +F + ++++WN +I A
Sbjct: 239 CSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPL 298
Query: 573 EALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSD 632
+AL+LF M S PN+ TY+++ S ++ G + H M +G E
Sbjct: 299 KALKLFVSMPEHGFS-----PNQGTYVSVLGVSSLVQLLSCGRQI-HGMLIKNGCETGIV 352
Query: 633 HYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLL 671
L+D + G +E++ + K + W++LL
Sbjct: 353 LGNALIDFYAKCGNLEDSRLCFDYIRD--KNIVCWNALL 389
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 137/327 (41%), Gaps = 28/327 (8%)
Query: 372 DFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVK--RGFEKDKYVQNALMDMYSRMGRIE 429
D ++ + SLL C + +F + +H + + YV N ++ +Y ++G +
Sbjct: 7 DLANHNDRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVS 66
Query: 430 ISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNS 489
++ +F M R+ VS+NT+I GY G D A + +M+ PN
Sbjct: 67 LAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY-----------FGYLPNQ 115
Query: 490 VTLMTVLPGCXXXXXXXXXXEIHAYALKQKL-ATDIAVGSALIDMYAKCGCLNLSRIVFD 548
T+ +L ++H +LK L D VG+ L+ +Y + L ++ VF+
Sbjct: 116 STVSGLLS--CASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFE 173
Query: 549 QMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHS 608
MP +++ TWN ++ G G +E + FR +V S E +++ + S
Sbjct: 174 DMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGAS-----LTESSFLGVLKGVSCV 228
Query: 609 GMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWS 668
+D L H G++ L+ G+ G A ++ + S + +W+
Sbjct: 229 KDLDISKQL-HCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGS--WDIVSWN 285
Query: 669 SLLGACKIHQNLEVGEIAAKQLLVLEP 695
+++ A +N + A +L V P
Sbjct: 286 AIICATAKSEN----PLKALKLFVSMP 308
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 273 bits (698), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 177/587 (30%), Positives = 273/587 (46%), Gaps = 61/587 (10%)
Query: 243 NTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALR 302
+ +S + +A+ L + Q G+R LAS L C + L+ GK IH +
Sbjct: 15 QSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKI 74
Query: 303 NTDLIDNSFVGSALVDMYCNCKKAD-------------------------------KGRW 331
N+ + + L+ MY C K + R
Sbjct: 75 TGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARV 134
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCK 391
VFD + R V WN M+ GYA++ EA+ + E S N + + LL ACV+ +
Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEF-RRSGIKFNEFSFAGLLTACVKSR 193
Query: 392 AFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMIT 451
HG V+ GF + + +++D Y++ G++E +K F M +DI W T+I+
Sbjct: 194 QLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLIS 253
Query: 452 GYVVCGRHDDALNLLHDMQRGQD--------------------DEYEDDESIPLKPNSVT 491
GY G + A L +M D + ++ +KP T
Sbjct: 254 GYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFT 313
Query: 492 LMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMP 551
+ L EIH Y ++ + + V S+LIDMY+K G L S VF
Sbjct: 314 FSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICD 373
Query: 552 TR-NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGM 610
+ + + WN +I A HG G +AL + M+ + ++PN T + I ACSHSG+
Sbjct: 374 DKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFR-----VQPNRTTLVVILNACSHSGL 428
Query: 611 VDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSL 670
V+EGL F +M HGI P +HYACL+DLLGR+G +E + I+ MP K W+++
Sbjct: 429 VEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDK-HIWNAI 487
Query: 671 LGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVR 730
LG C+IH N E+G+ AA +L+ L+P ++ Y+LLS+IY+ G W+ +R MK+ V
Sbjct: 488 LGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVN 547
Query: 731 KEPGCSWIEHRDEVHKFLAGDASHPQSK--ELHEYLENLLQRMRKEG 775
KE SWIE +V F D SH ++ E++ L NL + +E
Sbjct: 548 KEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAAVIEEEA 594
Score = 144 bits (363), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 184/430 (42%), Gaps = 52/430 (12%)
Query: 176 LVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFD 235
L+ + C D + Q+H RN ++ N +V+ Y K G + A+ +F
Sbjct: 88 LIGMYMKCGKPIDACKVFDQMH---LRN----LYSWNNMVSGYVKSGMLVRARVVFDSMP 140
Query: 236 DKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKE 295
++D+VSWNT++ +Q+ EAL F +SG++ + + A L AC L+ ++
Sbjct: 141 ERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQ 200
Query: 296 IHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNE 355
HG L + N + +++D Y C + + + FD + + + +W +I+GYA+
Sbjct: 201 AHGQVL-VAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLG 259
Query: 356 FDDEAIKLFIEMVYESDFT------------------------------PNSTTLSSLLP 385
+ A KLF EM ++ + P T SS L
Sbjct: 260 DMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLC 319
Query: 386 ACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSM-DRRDIV 444
A + + IHGY+++ + V ++L+DMYS+ G +E S+ +F D+ D V
Sbjct: 320 ASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCV 379
Query: 445 SWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXX 504
WNTMI+ G AL +L DM + ++PN TL+ +L C
Sbjct: 380 FWNTMISALAQHGLGHKALRMLDDMIK-----------FRVQPNRTTLVVILNACSHSGL 428
Query: 505 XXXXXE-IHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR-NVITWNVLI 562
+ ++ + D + LID+ + GC ++MP + WN ++
Sbjct: 429 VEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAIL 488
Query: 563 MAYGMHGKGE 572
+HG E
Sbjct: 489 GVCRIHGNEE 498
Score = 129 bits (324), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 183/453 (40%), Gaps = 76/453 (16%)
Query: 43 LRLQAQSSSFLQAISTYANMVAAGV--PPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKF 100
L A + QA+S ++ G+ P D A ++L+ L GK IH H+
Sbjct: 18 LSKHATKAELSQAVSRLESLTQQGIRLPFDLLA--SLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 101 GYASTSVAVANSLVNMYGKCGD-------------------------------LAGAHHV 129
G+ + ++N L+ MY KCG L A V
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 130 FDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDG 189
FD + +RD VSWN+M+ + + F+ + AC R
Sbjct: 136 FDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQ- 194
Query: 190 LSLGKQVHAYTFRNG----------------------------DWRTFTN----NALVTM 217
L L +Q H G D T + L++
Sbjct: 195 LQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISG 254
Query: 218 YAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTL 277
YAKLG ++ A+ LF +K+ VSW +I+ + AL M+ GV+P+ T
Sbjct: 255 YAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTF 314
Query: 278 ASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI- 336
+S L A + + LR GKEIHGY +R T++ N+ V S+L+DMY + VF
Sbjct: 315 SSCLCASASIASLRHGKEIHGYMIR-TNVRPNAIVISSLIDMYSKSGSLEASERVFRICD 373
Query: 337 LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDK 396
+ WN MI+ A++ +A+++ +M+ + PN TTL +L AC + L +
Sbjct: 374 DKHDCVFWNTMISALAQHGLGHKALRMLDDMI-KFRVQPNRTTLVVILNAC--SHSGLVE 430
Query: 397 EGIHGY---VVKRGFEKDKYVQNALMDMYSRMG 426
EG+ + V+ G D+ L+D+ R G
Sbjct: 431 EGLRWFESMTVQHGIVPDQEHYACLIDLLGRAG 463
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
++P +W + + S +A+ + M+A GV P+ F F + L A+A + L GK+I
Sbjct: 274 KNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEI 333
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDH--VSWNSMIAAACRF 151
HG++ + ++ ++ SL++MY K G L + VF RI D H V WN+MI+A +
Sbjct: 334 HGYMIRTNVRPNAIVIS-SLIDMYSKSGSLEASERVF-RICDDKHDCVFWNTMISALAQH 391
Query: 152 XXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSN 185
V P TLV I +ACS+
Sbjct: 392 GLGHKALRMLDDMIKFRVQPNRTTLVVILNACSH 425
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 272 bits (696), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 250/473 (52%), Gaps = 32/473 (6%)
Query: 321 CNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNE--FDDEAIKLFIEMVYESDFTPNST 378
CN A R++FD ++ A++ Y+ + A F MV S PN
Sbjct: 71 CNLSYA---RFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHF 127
Query: 379 TLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMY-SRMGRIEISKSIFGS 437
+L + + +H ++ K GF VQ AL+ Y S + I +++ +F
Sbjct: 128 IYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDE 187
Query: 438 MDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQR-------------GQDDEYEDDESI- 483
M R++VSW M++GY G +A+ L DM Q+ + + S+
Sbjct: 188 MSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLF 247
Query: 484 -------PLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAK 536
++PN VT++ VL C IHA+A ++ L++D+ V ++L+D+Y K
Sbjct: 248 RRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGK 307
Query: 537 CGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEV 596
CG L + VF +++ WN +I + +HG+ EEA+ +F M+ K + +I+P+ +
Sbjct: 308 CGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMM--KLNINDIKPDHI 365
Query: 597 TYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKT 656
T+I + AC+H G+V +G F M GIEP +HY CL+DLLGR+GR +EA +++ T
Sbjct: 366 TFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMST 425
Query: 657 MPSNMKKVDA-WSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWD 715
M MK +A W SLL ACKIH +L++ E+A K L+ L PN + +++N+Y G W+
Sbjct: 426 M--KMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWE 483
Query: 716 QAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLL 768
+A RK +K K PG S IE +EVH+F + D SHP+++E++ L++L+
Sbjct: 484 EARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLI 536
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 127/255 (49%), Gaps = 6/255 (2%)
Query: 213 ALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHML-QSGVR 271
A+++ YA+ G I A ALF ++D+ SWN ++++ +QN F EA+ M+ + +R
Sbjct: 198 AMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIR 257
Query: 272 PDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRW 331
P+ VT+ L AC+ L+ K IH +A R DL + FV ++LVD+Y C ++
Sbjct: 258 PNEVTVVCVLSACAQTGTLQLAKGIHAFAYRR-DLSSDVFVSNSLVDLYGKCGNLEEASS 316
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYE--SDFTPNSTTLSSLLPACVR 389
VF ++++ WN+MI +A + +EAI +F EM+ +D P+ T LL AC
Sbjct: 317 VFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTH 376
Query: 390 CKAFLDKEGIHGYVVKR-GFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRR-DIVSWN 447
G + R G E L+D+ R GR + + + +M + D W
Sbjct: 377 GGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWG 436
Query: 448 TMITGYVVCGRHDDA 462
+++ + G D A
Sbjct: 437 SLLNACKIHGHLDLA 451
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 157/372 (42%), Gaps = 61/372 (16%)
Query: 314 SALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDF 373
+A++ Y +F+ + R V WNA++A +N EA+ LF M+ E
Sbjct: 197 TAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSI 256
Query: 374 TPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKS 433
PN T+ +L AC + +GIH + +R D +V N+L+D+Y + G +E + S
Sbjct: 257 RPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASS 316
Query: 434 IFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLM 493
+F ++ + +WN+MI + + GR ++A+ + +M + ++ +KP+ +T +
Sbjct: 317 VFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNIND--------IKPDHITFI 368
Query: 494 TVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR 553
+L C G ++ R FD M R
Sbjct: 369 GLLNAC-----------------------------------THGGLVSKGRGYFDLMTNR 393
Query: 554 NVIT-----WNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHS 608
I + LI G G+ +EALE+ M +++ +E + ++ AC
Sbjct: 394 FGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTM--------KMKADEAIWGSLLNACKIH 445
Query: 609 GMVDEGLNLFHTMKANHGIEPSSDHY-ACLVDLLGRSGRVEEAYKLIKTMP-SNMKKVDA 666
G +D + A + P++ Y A + +L G G EEA + K + N K
Sbjct: 446 GHLDLAEVAVKNLVA---LNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPG 502
Query: 667 WSSLLGACKIHQ 678
WS + ++HQ
Sbjct: 503 WSRIEIDNEVHQ 514
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 162/357 (45%), Gaps = 58/357 (16%)
Query: 37 SAWIDHLRLQAQSSSFLQAISTYANMVAAGVP-PDNFAFPAVLKAAAGVNDLNLGKQIHG 95
+A+ L L A S A S + MV VP P++F +P VLK+ ++ +H
Sbjct: 96 TAYSSSLPLHASS-----AFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHT 150
Query: 96 HVFKFG--------------YAST-----------------SVAVANSLVNMYGKCGDLA 124
H+FK G YAS+ +V ++++ Y + GD++
Sbjct: 151 HLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDIS 210
Query: 125 GAHHVFDRISDRDHVSWNSMIAAACR-FXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHAC 183
A +F+ + +RD SWN+++AA + ++ P T+V + AC
Sbjct: 211 NAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSAC 270
Query: 184 SNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSW 242
+ L L K +HA+ +R F +N+LV +Y K G ++EA ++F + K L +W
Sbjct: 271 AQ-TGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAW 329
Query: 243 NTVISSLSQNDRFEEALLFLYHMLQ---SGVRPDGVTLASALPACSHLEMLRTGKEIHGY 299
N++I+ + + R EEA+ M++ + ++PD +T L AC+H ++ G+ GY
Sbjct: 330 NSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGR---GY 386
Query: 300 ALRNTDLIDNSFV-------GSALVDMYCNCKKADKGRWVFDGI-LRRTVAVWNAMI 348
DL+ N F L+D+ + D+ V + ++ A+W +++
Sbjct: 387 ----FDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLL 439
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 11/223 (4%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMV-AAGVPPDNFAFPAVLKAAAGVNDLNLGKQ 92
R +W L Q+ FL+A+S + M+ + P+ VL A A L L K
Sbjct: 222 RDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKG 281
Query: 93 IHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMI---AAAC 149
IH ++ S+ V V+NSLV++YGKCG+L A VF S + +WNSMI A
Sbjct: 282 IHAFAYRRDL-SSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHG 340
Query: 150 RFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGL-SLGK-QVHAYTFRNG-DW 206
R ++ P T + + +AC++ GL S G+ T R G +
Sbjct: 341 RSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTH--GGLVSKGRGYFDLMTNRFGIEP 398
Query: 207 RTFTNNALVTMYAKLGRIDEAKALFGLFDDK-DLVSWNTVISS 248
R L+ + + GR DEA + K D W +++++
Sbjct: 399 RIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNA 441
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 272 bits (695), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 163/549 (29%), Positives = 279/549 (50%), Gaps = 25/549 (4%)
Query: 194 KQVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQN 252
+++H++ ++ R + L YA + A+ LF +F ++ + WN++I + ++
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 253 DRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFV 312
+F L +L+S RPD T A S + + IHG A+ + D
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQ-IC 143
Query: 313 GSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESD 372
GSA+V Y + +F I +A+WN MI GY F D+ I LF ++
Sbjct: 144 GSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLF-NLMQHRG 202
Query: 373 FTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISK 432
PN T+ +L + L +H + +K + YV AL++MYSR I +
Sbjct: 203 HQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASAC 262
Query: 433 SIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTL 492
S+F S+ D+V+ +++ITGY CG H +AL+L +++ KP+ V +
Sbjct: 263 SVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGK-----------KPDCVLV 311
Query: 493 MTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPT 552
VL C E+H+Y ++ L DI V SALIDMY+KCG L + +F +P
Sbjct: 312 AIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPE 371
Query: 553 RNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVD 612
+N++++N LI+ G+HG A E F ++ + P+E+T+ A+ C HSG+++
Sbjct: 372 KNIVSFNSLILGLGLHGFASTAFEKFTEIL-----EMGLIPDEITFSALLCTCCHSGLLN 426
Query: 613 EGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDA--WSSL 670
+G +F MK+ GIEP ++HY +V L+G +G++EEA++ + ++ K +D+ +L
Sbjct: 427 KGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSL---QKPIDSGILGAL 483
Query: 671 LGACKIHQNLEVGEIAAKQLLV-LEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGV 729
L C++H+N + E+ A+ + E + + V+LSN+Y+ G WD+ +R + E
Sbjct: 484 LSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYG 543
Query: 730 RKEPGCSWI 738
K PG SW
Sbjct: 544 GKLPGISWF 552
Score = 139 bits (350), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 132/553 (23%), Positives = 221/553 (39%), Gaps = 70/553 (12%)
Query: 110 ANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNV 169
A L Y DL A +FD +R WNS+I A + +
Sbjct: 43 ATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDT 102
Query: 170 DPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAK 228
P +FT +A S D L + +H +G + +A+V Y+K G I EA
Sbjct: 103 RPDNFTYACLARGFSESFDTKGL-RCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEAS 161
Query: 229 ALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLE 288
LF D DL WN +I +++ + M G +P+ T+ +
Sbjct: 162 KLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPS 221
Query: 289 MLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMI 348
+L +H + L+ +L +S+VG ALV+MY C VF+ I + +++I
Sbjct: 222 LLLVAWSVHAFCLK-INLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLI 280
Query: 349 AGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGF 408
GY+R EA+ LF E+ S P+ ++ +L +C + + +H YV++ G
Sbjct: 281 TGYSRCGNHKEALHLFAEL-RMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGL 339
Query: 409 EKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHD 468
E D V +AL+DMYS+ G ++ + S+F + ++IVS+N++I G LH
Sbjct: 340 ELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLG-----------LHG 388
Query: 469 MQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGS 528
+++ + + L P+ +T +L C
Sbjct: 389 FASTAFEKFTEILEMGLIPDEITFSALLCTC----------------------------- 419
Query: 529 ALIDMYAKCGCLNLSRIVFDQMPTRNVIT-----WNVLIMAYGMHGKGEEALELFRRMVA 583
G LN + +F++M + I + ++ GM GK EEA E +
Sbjct: 420 ------CHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQK 473
Query: 584 EKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKAN---HGIEPSSDHYACLVDL 640
DS A+ + C V E +L + N +G E S + L ++
Sbjct: 474 PIDSG--------ILGALLSCCE----VHENTHLAEVVAENIHKNGEERRSVYKVMLSNV 521
Query: 641 LGRSGRVEEAYKL 653
R GR +E +L
Sbjct: 522 YARYGRWDEVERL 534
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 163/359 (45%), Gaps = 13/359 (3%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
RS W +R A++ F +S ++ ++ + PDNF + + + + D + I
Sbjct: 69 RSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCI 128
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAA--ACRF 151
HG G + +++V Y K G + A +F I D D WN MI C F
Sbjct: 129 HGIAIVSGLGFDQIC-GSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGF 187
Query: 152 XXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDG--LSLGKQVHAYTFR-NGDWRT 208
P +T+V++ S L D L + VHA+ + N D +
Sbjct: 188 WDKGINLFNLMQHRGHQ--PNCYTMVALT---SGLIDPSLLLVAWSVHAFCLKINLDSHS 242
Query: 209 FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQS 268
+ ALV MY++ I A ++F + DLV+ +++I+ S+ +EAL + S
Sbjct: 243 YVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMS 302
Query: 269 GVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADK 328
G +PD V +A L +C+ L +GKE+H Y +R +D V SAL+DMY C
Sbjct: 303 GKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIK-VCSALIDMYSKCGLLKC 361
Query: 329 GRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
+F GI + + +N++I G + F A + F E++ E P+ T S+LL C
Sbjct: 362 AMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEIL-EMGLIPDEITFSALLCTC 419
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 113/244 (46%), Gaps = 3/244 (1%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+ I+ + M G P+ + A+ + L + +H K S S V +L
Sbjct: 190 KGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSY-VGCAL 248
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
VNMY +C +A A VF+ IS+ D V+ +S+I R P
Sbjct: 249 VNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDC 308
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFG 232
+ + +C+ L D +S GK+VH+Y R G + +AL+ MY+K G + A +LF
Sbjct: 309 VLVAIVLGSCAELSDSVS-GKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFA 367
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRT 292
+K++VS+N++I L + A +L+ G+ PD +T ++ L C H +L
Sbjct: 368 GIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNK 427
Query: 293 GKEI 296
G+EI
Sbjct: 428 GQEI 431
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 21/224 (9%)
Query: 394 LDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGY 453
L+ + +H +V K +D Y L Y+ + ++ +F R + WN++I Y
Sbjct: 22 LNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAY 81
Query: 454 VVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHA 513
+ L+L + R +P++ T + G IH
Sbjct: 82 AKAHQFTTVLSLFSQILRSDT-----------RPDNFTYACLARGFSESFDTKGLRCIHG 130
Query: 514 YALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEE 573
A+ L D GSA++ Y+K G + + +F +P ++ WNV+I+ YG G ++
Sbjct: 131 IAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDK 190
Query: 574 ALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNL 617
+ LF M ++ +PN T +A+ SG++D L L
Sbjct: 191 GINLFNLM-----QHRGHQPNCYTMVAL-----TSGLIDPSLLL 224
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 270 bits (689), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 190/628 (30%), Positives = 306/628 (48%), Gaps = 31/628 (4%)
Query: 119 KCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVS 178
K G+L AH FD +S RD V++N +I+ R+ + ++ T S
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPS 117
Query: 179 IAHACSN---LRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLF 234
+ CS+ R+G+ QVH G F +ALV +YA L +D A LF
Sbjct: 118 VLSVCSDELFCREGI----QVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEM 173
Query: 235 DDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGK 294
D++L N ++ Q + M GV +G+T + CSH ++ GK
Sbjct: 174 LDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGK 233
Query: 295 EIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARN 354
++H +++ I N FV + LVD Y C F+ + + V WN++++ A
Sbjct: 234 QLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADY 293
Query: 355 EFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDK-Y 413
+++ LF +M + P+ S L C R + IH YV+K GF+ +
Sbjct: 294 GSVLDSLDLFSKMQFWGK-RPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLH 352
Query: 414 VQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALN---LLHDMQ 470
VQ+AL+DMY + IE S ++ S+ ++ N+++T + CG D + L+ D
Sbjct: 353 VQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEG 412
Query: 471 RGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSAL 530
G D E S LK S++L L C +H A+K A D+AV +L
Sbjct: 413 TGID---EVTLSTVLKALSLSLPESLHSCTL---------VHCCAIKSGYAADVAVSCSL 460
Query: 531 IDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKE 590
ID Y K G +SR VFD++ T N+ +I Y +G G + +++ R M
Sbjct: 461 IDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREM-----DRMN 515
Query: 591 IRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEA 650
+ P+EVT +++ + CSHSG+V+EG +F ++++ +GI P YAC+VDLLGR+G VE+A
Sbjct: 516 LIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKA 575
Query: 651 YKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSS 710
+L+ + V AWSSLL +C+IH+N +G AA+ L+ LEP + Y+ +S Y
Sbjct: 576 ERLLLQARGDADCV-AWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFE 634
Query: 711 AGLWDQAMDIRKKMKEMGVRKEPGCSWI 738
G ++ + IR+ + +E G S +
Sbjct: 635 IGDFEISRQIREIAASRELMREIGYSSV 662
Score = 149 bits (376), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 125/527 (23%), Positives = 227/527 (43%), Gaps = 30/527 (5%)
Query: 53 LQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANS 112
L+AI YA MV+ G+ FP+VL + G Q+H V G+ ++ V ++
Sbjct: 94 LRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFG-CNMFVRSA 152
Query: 113 LVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPT 172
LV +Y + A +FD + DR+ N ++ C+ V
Sbjct: 153 LVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKN 212
Query: 173 SFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDW---RTFTNNALVTMYAKLGRIDEAKA 229
T + CS+ R + GKQ+H+ ++G W F N LV Y+ G + +
Sbjct: 213 GLTYCYMIRGCSHDRL-VYEGKQLHSLVVKSG-WNISNIFVANVLVDYYSACGDLSGSMR 270
Query: 230 LFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEM 289
F +KD++SWN+++S + ++L M G RP S L CS
Sbjct: 271 SFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSD 330
Query: 290 LRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIA 349
+++GK+IH Y L+ + + V SAL+DMY C + ++ + + N+++
Sbjct: 331 IQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMT 390
Query: 350 GYARNEFDDEAIKLFIEMVYES---DFTPNSTTLSSL---LPACVRCKAFLDKEGIHGYV 403
+ I++F M+ E D ST L +L LP + +H
Sbjct: 391 SLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTL-----VHCCA 445
Query: 404 VKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDAL 463
+K G+ D V +L+D Y++ G+ E+S+ +F +D +I ++I GY G D +
Sbjct: 446 IKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCV 505
Query: 464 NLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIH-AYALKQKLAT 522
+L +M R + L P+ VT+++VL GC I + K ++
Sbjct: 506 KMLREMDR-----------MNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISP 554
Query: 523 DIAVGSALIDMYAKCGCLNLS-RIVFDQMPTRNVITWNVLIMAYGMH 568
+ + ++D+ + G + + R++ + + W+ L+ + +H
Sbjct: 555 GRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIH 601
Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 187/414 (45%), Gaps = 9/414 (2%)
Query: 43 LRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGY 102
LR Q+ + Y M GV + + +++ + + GKQ+H V K G+
Sbjct: 185 LRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGW 244
Query: 103 ASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXX 162
+++ VAN LV+ Y CGDL+G+ F+ + ++D +SWNS+++ +
Sbjct: 245 NISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFS 304
Query: 163 XXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTF-TNNALVTMYAK 220
P+ +S + CS D + GKQ+H Y + G D + +AL+ MY K
Sbjct: 305 KMQFWGKRPSIRPFMSFLNFCSRNSD-IQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGK 363
Query: 221 LGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASA 280
I+ + L+ +L N++++SL ++ + M+ G D VTL++
Sbjct: 364 CNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTV 423
Query: 281 LPACSHL--EMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILR 338
L A S E L + +H A+++ D + V +L+D Y + + R VFD +
Sbjct: 424 LKALSLSLPESLHSCTLVHCCAIKSGYAADVA-VSCSLIDAYTKSGQNEVSRKVFDELDT 482
Query: 339 RTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEG 398
+ ++I GYARN + +K+ EM + P+ T+ S+L C + E
Sbjct: 483 PNIFCLTSIINGYARNGMGTDCVKMLREM-DRMNLIPDEVTILSVLSGCSHSGLVEEGEL 541
Query: 399 IHGYV-VKRGFEKDKYVQNALMDMYSRMGRIE-ISKSIFGSMDRRDIVSWNTMI 450
I + K G + + ++D+ R G +E + + + D V+W++++
Sbjct: 542 IFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLL 595
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 117/262 (44%), Gaps = 4/262 (1%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W + + A S L ++ ++ M G P F + L + +D+ GKQIH +V
Sbjct: 282 SWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYV 341
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAA--CRFXXXX 155
K G+ +S+ V ++L++MYGKC + + ++ + + NS++ + C
Sbjct: 342 LKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDI 401
Query: 156 XXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNAL 214
+D + + V A + S L + L VH ++G + +L
Sbjct: 402 IEMFGLMIDEGTGIDEVTLSTVLKALSLS-LPESLHSCTLVHCCAIKSGYAADVAVSCSL 460
Query: 215 VTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDG 274
+ Y K G+ + ++ +F D ++ ++I+ ++N + + L M + + PD
Sbjct: 461 IDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDE 520
Query: 275 VTLASALPACSHLEMLRTGKEI 296
VT+ S L CSH ++ G+ I
Sbjct: 521 VTILSVLSGCSHSGLVEEGELI 542
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 269 bits (687), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 167/551 (30%), Positives = 277/551 (50%), Gaps = 36/551 (6%)
Query: 233 LFDDK----DLVSWNTVISSLSQNDRFEEALLFLYHML--QSGVRPDGVTLASALPACSH 286
LFD + D N++I + + ++ ++ LY L ++ PD T + +CS
Sbjct: 32 LFDQRPQRDDSFLSNSMIKAYLETRQYPDSFA-LYRDLRKETCFAPDNFTFTTLTKSCSL 90
Query: 287 LEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNA 346
+ G ++H R + +V + +VDMY K R FD + R+ W A
Sbjct: 91 SMCVYQGLQLHSQIWR-FGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTA 149
Query: 347 MIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAF-LDKEGIHGYVVK 405
+I+GY R D A KLF +M + D + + + + A L E H V+
Sbjct: 150 LISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVI- 208
Query: 406 RGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNL 465
++ Y + I+ ++ +F +M R++VSWNTMI GY + + + L
Sbjct: 209 --------TWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRL 260
Query: 466 LHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIA 525
+MQ + L P+ VT+++VLP H + ++KL +
Sbjct: 261 FQEMQ----------ATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVK 310
Query: 526 VGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEK 585
V +A++DMY+KCG + ++ +FD+MP + V +WN +I Y ++G AL+LF M+ E+
Sbjct: 311 VCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE 370
Query: 586 DSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSG 645
+P+E+T +A+ AC+H G+V+EG FH M+ G+ +HY C+VDLLGR+G
Sbjct: 371 ------KPDEITMLAVITACNHGGLVEEGRKWFHVMR-EMGLNAKIEHYGCMVDLLGRAG 423
Query: 646 RVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLS 705
++EA LI MP + SS L AC ++++E E K+ + LEP +YVLL
Sbjct: 424 SLKEAEDLITNMPFEPNGI-ILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLR 482
Query: 706 NIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLE 765
N+Y++ WD ++ M++ +KE GCS IE V +F++GD +HP + +H L
Sbjct: 483 NLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLG 542
Query: 766 NLLQRMRKEGY 776
+LL M +E Y
Sbjct: 543 DLLMHMNEEKY 553
Score = 144 bits (363), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 178/420 (42%), Gaps = 23/420 (5%)
Query: 171 PTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDEAKA 229
P +FT ++ +CS L + G Q+H+ +R G + + +V MYAK G++ A+
Sbjct: 76 PDNFTFTTLTKSCS-LSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARN 134
Query: 230 LFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEM 289
F + VSW +IS + + A M D V + +
Sbjct: 135 AFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMDG-----F 186
Query: 290 LRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIA 349
+++G L + + ++ YCN K D R +FD + R + WN MI
Sbjct: 187 VKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIG 246
Query: 350 GYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFE 409
GY +N+ E I+LF EM + P+ T+ S+LPA A E H +V ++ +
Sbjct: 247 GYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLD 306
Query: 410 KDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDM 469
K V A++DMYS+ G IE +K IF M + + SWN MI GY + G AL+L M
Sbjct: 307 KKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM 366
Query: 470 QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSA 529
I KP+ +T++ V+ C + + L I
Sbjct: 367 M------------IEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGC 414
Query: 530 LIDMYAKCGCLNLSRIVFDQMPTR-NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSN 588
++D+ + G L + + MP N I + + A G + E A + ++ V + N
Sbjct: 415 MVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQN 474
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 184/386 (47%), Gaps = 42/386 (10%)
Query: 69 PDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHH 128
PDNF F + K+ + + G Q+H +++FG+ + + V+ +V+MY K G + A +
Sbjct: 76 PDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCA-DMYVSTGVVDMYAKFGKMGCARN 134
Query: 129 VFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRD 188
FD + R VSW ++I+ R +D S + H ++D
Sbjct: 135 AFDEMPHRSEVSWTALISGYIR---------------CGELDLASKLFDQMPH----VKD 175
Query: 189 GLSLGKQVHAYTFRNGDW----RTF---TNNALVTM------YAKLGRIDEAKALFGLFD 235
+ + + ++GD R F T+ ++T Y + ID A+ LF
Sbjct: 176 VVIYNAMMDGFV-KSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMP 234
Query: 236 DKDLVSWNTVISSLSQNDRFEEAL-LFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGK 294
+++LVSWNT+I QN + +E + LF + + PD VT+ S LPA S L G+
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE 294
Query: 295 EIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARN 354
H + R L V +A++DMY C + +K + +FD + + VA WNAMI GYA N
Sbjct: 295 WCHCFVQRKK-LDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALN 353
Query: 355 EFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYV 414
A+ LF+ M+ E P+ T+ +++ AC L +EG + V R + +
Sbjct: 354 GNARAALDLFVTMMIEE--KPDEITMLAVITACNH--GGLVEEGRKWFHVMREMGLNAKI 409
Query: 415 QN--ALMDMYSRMGRIEISKSIFGSM 438
++ ++D+ R G ++ ++ + +M
Sbjct: 410 EHYGCMVDLLGRAGSLKEAEDLITNM 435
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAA-GVPPDNFAFPAVLKAAAGVNDLNLGKQ 92
R+ +W + Q+ + I + M A + PD+ +VL A + L+LG+
Sbjct: 236 RNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEW 295
Query: 93 IHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMI 145
H V + V V ++++MY KCG++ A +FD + ++ SWN+MI
Sbjct: 296 CHCFVQR-KKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMI 347
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 267 bits (682), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 151/492 (30%), Positives = 256/492 (52%), Gaps = 37/492 (7%)
Query: 296 IHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNE 355
IHG L +SF+ + +VD + D +F+ + V ++N++I Y N
Sbjct: 35 IHG-------LSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87
Query: 356 FDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQ 415
+ I+++ +++ +S P+ T + +C + + +HG++ K G +
Sbjct: 88 LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE 147
Query: 416 NALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLH-------- 467
NAL+DMY + + + +F M RD++SWN++++GY G+ A L H
Sbjct: 148 NALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIV 207
Query: 468 ---DMQRGQD---------DEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYA 515
M G D + + + ++P+ ++L++VLP C IH YA
Sbjct: 208 SWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267
Query: 516 LKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEAL 575
++ V +ALI+MY+KCG ++ + +F QM ++VI+W+ +I Y HG A+
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327
Query: 576 ELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYA 635
E F M K ++PN +T++ + +ACSH GM EGL F M+ ++ IEP +HY
Sbjct: 328 ETFNEMQRAK-----VKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYG 382
Query: 636 CLVDLLGRSGRVEEAYKLIKTMPSNMKKVDA--WSSLLGACKIHQNLEVGEIAAKQLLVL 693
CL+D+L R+G++E A ++ KTMP K D+ W SLL +C+ NL+V +A L+ L
Sbjct: 383 CLIDVLARAGKLERAVEITKTMP---MKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVEL 439
Query: 694 EPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDAS 753
EP +YVLL+NIY+ G W+ +RK ++ ++K PG S IE + V +F++GD S
Sbjct: 440 EPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNS 499
Query: 754 HPQSKELHEYLE 765
P E+ L+
Sbjct: 500 KPFWTEISIVLQ 511
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 133/284 (46%), Gaps = 35/284 (12%)
Query: 43 LRLQAQSSSFLQAISTYANMVAAGVP-PDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFG 101
+R +S + I Y ++ PD F FP + K+ A + LGKQ+HGH+ KFG
Sbjct: 80 IRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFG 139
Query: 102 YASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXX- 160
V N+L++MY K DL AH VFD + +RD +SWNS+++ R
Sbjct: 140 -PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLF 198
Query: 161 ------------------------------XXXXXXXNVDPTSFTLVSIAHACSNLRDGL 190
++P +L+S+ +C+ L L
Sbjct: 199 HLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQL-GSL 257
Query: 191 SLGKQVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSL 249
LGK +H Y R G + T NAL+ MY+K G I +A LFG + KD++SW+T+IS
Sbjct: 258 ELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGY 317
Query: 250 SQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTG 293
+ + A+ M ++ V+P+G+T L ACSH+ M + G
Sbjct: 318 AYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEG 361
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 199/431 (46%), Gaps = 47/431 (10%)
Query: 70 DNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHV 129
+N+ P + + V N K+I+ + G + +S V +V+ K D+ A +
Sbjct: 10 ENYFIPFLQR----VKSRNEWKKINASIIIHGLSQSSFMVTK-MVDFCDKIEDMDYATRL 64
Query: 130 FDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD-PTSFTLVSIAHACSNLRD 188
F+++S+ + +NS+I A + + P FT + +C++L
Sbjct: 65 FNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASL-G 123
Query: 189 GLSLGKQVHAYTFRNGD-WRTFTNNALVTMY----------------------------- 218
LGKQVH + + G + T NAL+ MY
Sbjct: 124 SCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLS 183
Query: 219 --AKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVT 276
A+LG++ +AK LF L DK +VSW +IS + + EA+ F M +G+ PD ++
Sbjct: 184 GYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEIS 243
Query: 277 LASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI 336
L S LP+C+ L L GK IH YA R + + V +AL++MY C + +F +
Sbjct: 244 LISVLPSCAQLGSLELGKWIHLYAERR-GFLKQTGVCNALIEMYSKCGVISQAIQLFGQM 302
Query: 337 LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDK 396
+ V W+ MI+GYA + AI+ F EM + PN T LL AC + +
Sbjct: 303 EGKDVISWSTMISGYAYHGNAHGAIETFNEM-QRAKVKPNGITFLGLLSACSHVGMW--Q 359
Query: 397 EGIHGY-VVKRGFEKDKYVQN--ALMDMYSRMGRIEISKSIFGSMDRR-DIVSWNTMITG 452
EG+ + ++++ ++ + +++ L+D+ +R G++E + I +M + D W ++++
Sbjct: 360 EGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSS 419
Query: 453 YVVCGRHDDAL 463
G D AL
Sbjct: 420 CRTPGNLDVAL 430
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 52 FLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVAN 111
+++A+ + M AG+ PD + +VL + A + L LGK IH + + G+ + V N
Sbjct: 222 YVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQT-GVCN 280
Query: 112 SLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDP 171
+L+ MY KCG ++ A +F ++ +D +SW++MI+ V P
Sbjct: 281 ALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKP 340
Query: 172 TSFTLVSIAHACSNL---RDGLSLGKQVHAYTFRNGDWRTFTN----NALVTMYAKLGRI 224
T + + ACS++ ++GL + D++ L+ + A+ G++
Sbjct: 341 NGITFLGLLSACSHVGMWQEGL------RYFDMMRQDYQIEPKIEHYGCLIDVLARAGKL 394
Query: 225 DEAKALFGLFDDK-DLVSWNTVISSLSQNDRFEEALLFLYHMLQ 267
+ A + K D W +++SS + AL+ + H+++
Sbjct: 395 ERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVE 438
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 266 bits (679), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 174/574 (30%), Positives = 295/574 (51%), Gaps = 30/574 (5%)
Query: 169 VDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEA 227
+ P L++ +C RD + + + +H Y + G D F + L+ ++ + I A
Sbjct: 24 LSPQCQKLINDLRSC---RDTVEVSR-IHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYA 78
Query: 228 KALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHL 287
++F + +L +NT+I S +D E A + G+ D + + L +CS
Sbjct: 79 SSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRE 138
Query: 288 EMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAV-WNA 346
+ G+ +HG ALR+ ++ + +AL+ YC C K R VFD + + AV ++
Sbjct: 139 LCVSIGEGLHGIALRSGFMVFTD-LRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFST 197
Query: 347 MIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKR 406
++ GY + A+ LF ++ +S+ N +TL S L A E H +K
Sbjct: 198 LMNGYLQVSKKALALDLF-RIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKI 256
Query: 407 GFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLL 466
G + D ++ AL+ MY + G I ++ IF R+D+V+WN MI Y G ++ + LL
Sbjct: 257 GLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLL 316
Query: 467 HDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAV 526
M+ YE +KPNS T + +L C + ++++A D +
Sbjct: 317 RQMK------YE-----KMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAIL 365
Query: 527 GSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKD 586
G+AL+DMYAK G L + +F++M ++V +W +I YG HG EA+ LF +M ++
Sbjct: 366 GTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKM---EE 422
Query: 587 SNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGR 646
N ++RPNE+T++ + ACSH G+V EG+ F M + P +HY C+VDLLGR+G+
Sbjct: 423 ENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQ 482
Query: 647 VEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSN 706
+EEAY+LI+ +P AW +LL AC+++ N ++GE +L + + +LL+
Sbjct: 483 LEEAYELIRNLPITSDST-AWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAG 541
Query: 707 IYSSAGLWDQAMDIRKKMKEMGV-RKEPGCSWIE 739
++ AG ++++D E+ RKE G S IE
Sbjct: 542 THAVAGNPEKSLD-----NELNKGRKEAGYSAIE 570
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 187/416 (44%), Gaps = 16/416 (3%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+A S + + A G+ D F+F LK+ + +++G+ +HG + G+ + + N+L
Sbjct: 108 RAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFT-DLRNAL 166
Query: 114 VNMYGKCGDLAGAHHVFDRISDR-DHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPT 172
++ Y CG ++ A VFD + D V++++++ + V
Sbjct: 167 IHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVN 226
Query: 173 SFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALF 231
TL+S A S+L D LS + H + G D AL+ MY K G I A+ +F
Sbjct: 227 VSTLLSFLSAISDLGD-LSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIF 285
Query: 232 GLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLR 291
KD+V+WN +I ++ EE + L M ++P+ T L +C++ E
Sbjct: 286 DCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAF 345
Query: 292 TGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGY 351
G+ + L + ++ +G+ALVDMY +K +F+ + + V W AMI+GY
Sbjct: 346 VGRTVADL-LEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGY 404
Query: 352 ARNEFDDEAIKLFIEMVYES-DFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEK 410
+ EA+ LF +M E+ PN T +L AC L EGI + KR E
Sbjct: 405 GAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNAC--SHGGLVMEGIRCF--KRMVEA 460
Query: 411 DKYVQNA-----LMDMYSRMGRIEISKSIFGSMD-RRDIVSWNTMITGYVVCGRHD 460
+ ++D+ R G++E + + ++ D +W ++ V G D
Sbjct: 461 YSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNAD 516
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 265 bits (677), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 170/591 (28%), Positives = 273/591 (46%), Gaps = 75/591 (12%)
Query: 200 TFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEAL 259
T N D R N +T R+D A + + ++ +N + +L
Sbjct: 799 TSLNQDCRLM--NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSL 856
Query: 260 LFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIH------GYALRNTDLIDNSFVG 313
ML+ V P T +S + A S + H G+ ++ +
Sbjct: 857 ELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVK---------IQ 907
Query: 314 SALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDF 373
+ L+D Y + + R VFD + R W M++ Y R D A L +M
Sbjct: 908 TTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMS----- 962
Query: 374 TPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKS 433
EK++ N L++ Y +G +E ++S
Sbjct: 963 -----------------------------------EKNEATSNCLINGYMGLGNLEQAES 987
Query: 434 IFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLM 493
+F M +DI+SW TMI GY R+ +A+ + + M +E I P+ VT+
Sbjct: 988 LFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMM---------EEGI--IPDEVTMS 1036
Query: 494 TVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR 553
TV+ C E+H Y L+ D+ +GSAL+DMY+KCG L + +VF +P +
Sbjct: 1037 TVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK 1096
Query: 554 NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDE 613
N+ WN +I HG +EAL++F +M E ++PN VT++++F AC+H+G+VDE
Sbjct: 1097 NLFCWNSIIEGLAAHGFAQEALKMFAKMEMES-----VKPNAVTFVSVFTACTHAGLVDE 1151
Query: 614 GLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGA 673
G ++ +M ++ I + +HY +V L ++G + EA +LI M V W +LL
Sbjct: 1152 GRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAV-IWGALLDG 1210
Query: 674 CKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKE- 732
C+IH+NL + EIA +L+VLEP + +Y LL ++Y+ W +IR +M+E+G+ K
Sbjct: 1211 CRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKIC 1270
Query: 733 PGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCV 783
PG S I H F A D SH S E+ L+ + +M GYV +T V
Sbjct: 1271 PGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQETENV 1321
Score = 183 bits (464), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 200/406 (49%), Gaps = 54/406 (13%)
Query: 53 LQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANS 112
++++ Y M+ V P ++ + +++KA++ + Q H F FG+ V + +
Sbjct: 853 IRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGF---HVKIQTT 909
Query: 113 LVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPT 172
L++ Y G + A VFD + +RD ++W +M++A R
Sbjct: 910 LIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVL-------------------- 949
Query: 173 SFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFG 232
++ SL Q+ + T+N L+ Y LG +++A++LF
Sbjct: 950 ------------DMDSANSLANQM-------SEKNEATSNCLINGYMGLGNLEQAESLFN 990
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRT 292
KD++SW T+I SQN R+ EA+ Y M++ G+ PD VT+++ + AC+HL +L
Sbjct: 991 QMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEI 1050
Query: 293 GKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYA 352
GKE+H Y L+N ++D ++GSALVDMY C ++ VF + ++ + WN++I G A
Sbjct: 1051 GKEVHMYTLQNGFVLD-VYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLA 1109
Query: 353 RNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDK 412
+ F EA+K+F +M ES PN+ T S+ AC A L EG Y + +
Sbjct: 1110 AHGFAQEALKMFAKMEMES-VKPNAVTFVSVFTACTH--AGLVDEGRRIY--RSMIDDYS 1164
Query: 413 YVQN-----ALMDMYSRMGRIEISKSIFGSMD-RRDIVSWNTMITG 452
V N ++ ++S+ G I + + G+M+ + V W ++ G
Sbjct: 1165 IVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDG 1210
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 11/215 (5%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W ++ +Q+ + +AI+ + M+ G+ PD V+ A A + L +GK++H +
Sbjct: 999 SWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYT 1058
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
+ G+ V + ++LV+MY KCG L A VF + ++ WNS+I
Sbjct: 1059 LQNGFV-LDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEA 1117
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGL-SLGKQVHAYTFRNGDWRTFTN----N 212
+V P + T VS+ AC++ GL G+++ Y D+ +N
Sbjct: 1118 LKMFAKMEMESVKPNAVTFVSVFTACTHA--GLVDEGRRI--YRSMIDDYSIVSNVEHYG 1173
Query: 213 ALVTMYAKLGRIDEAKALFGLFD-DKDLVSWNTVI 246
+V +++K G I EA L G + + + V W ++
Sbjct: 1174 GMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 1208
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 109/267 (40%), Gaps = 29/267 (10%)
Query: 513 AYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGE 572
A +K L D + + I L+L+ QM NV +N L +
Sbjct: 794 AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPI 853
Query: 573 EALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSD 632
+LEL+ RM+ +DS + P+ TY ++ A S + E L H K G
Sbjct: 854 RSLELYVRML--RDS---VSPSSYTYSSLVKASSFASRFGESLQA-HIWKFGFGFHVKIQ 907
Query: 633 HYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLV 692
L+D +GR+ EA K+ MP + AW++++ A + +++ A Q+
Sbjct: 908 --TTLIDFYSATGRIREARKVFDEMPE--RDDIAWTTMVSAYRRVLDMDSANSLANQM-- 961
Query: 693 LEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDA 752
E N A+ L+ N Y G +QA + +M + SW + G
Sbjct: 962 SEKNEATSNCLI-NGYMGLGNLEQAESLFNQMPVKDI-----ISWT-------TMIKG-- 1006
Query: 753 SHPQSKELHEYLENLLQRMRKEGYVPD 779
+ Q+K E + + +M +EG +PD
Sbjct: 1007 -YSQNKRYREAIA-VFYKMMEEGIIPD 1031
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 262 bits (670), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 139/417 (33%), Positives = 222/417 (53%), Gaps = 28/417 (6%)
Query: 348 IAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRG 407
++ YA ++A+ LF++M ++ S L +C + +H + VK
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 408 FEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLH 467
F + +V AL+DMY + + ++ +F + +R+ V WN MI+ Y CG+ +A+ L
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 468 DMQ------------RG----QDDEYEDDE------SIPLKPNSVTLMTVLPGCXXXXXX 505
M +G +D Y E KPN +TL+ ++ C
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAF 198
Query: 506 XXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAY 565
EIH+YA + + + S L++ Y +CG + ++VFD M R+V+ W+ LI AY
Sbjct: 199 RLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAY 258
Query: 566 GMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANH 625
+HG E AL+ F+ M K + P+++ ++ + ACSH+G+ DE L F M+ ++
Sbjct: 259 ALHGDAESALKTFQEMELAK-----VTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDY 313
Query: 626 GIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEI 685
G+ S DHY+CLVD+L R GR EEAYK+I+ MP W +LLGAC+ + +E+ EI
Sbjct: 314 GLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEK-PTAKTWGALLGACRNYGEIELAEI 372
Query: 686 AAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRD 742
AA++LL++EP ++YVLL IY S G ++A +R KMKE GV+ PG SW +D
Sbjct: 373 AARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSWCLFKD 429
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 158/376 (42%), Gaps = 57/376 (15%)
Query: 239 LVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRP-DGVTLASALPACSHLEMLRTGKEIH 297
L+S +SS + E+AL M S P D + AL +C+ G +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 298 GYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFD 357
++++ ++ + N FVG AL+DMY C R +FD I +R VWNAMI+ Y
Sbjct: 72 AHSVK-SNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 358 DEAIKLFIEM--------------------------------VYESDFTPNSTTLSSLLP 385
EA++L+ M + E F PN TL +L+
Sbjct: 131 KEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVS 190
Query: 386 ACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVS 445
AC AF + IH Y + E +++ L++ Y R G I + +F SM+ RD+V+
Sbjct: 191 ACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVA 250
Query: 446 WNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXX 505
W+++I+ Y + G + AL +M+ + + P+ + + VL C
Sbjct: 251 WSSLISAYALHGDAESALKTFQEMELAK-----------VTPDDIAFLNVLKACSHAGLA 299
Query: 506 XXXXEIHAYALKQKLATDIAVG------SALIDMYAKCGCLNLSRIVFDQMPTR-NVITW 558
A +++ D + S L+D+ ++ G + V MP + TW
Sbjct: 300 D-----EALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTW 354
Query: 559 NVLIMAYGMHGKGEEA 574
L+ A +G+ E A
Sbjct: 355 GALLGACRNYGEIELA 370
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 143/319 (44%), Gaps = 45/319 (14%)
Query: 443 IVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXX 502
++S ++ Y G H+ ALNL M ++PL + +L L C
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMH--------SSFALPLDAHVFSL--ALKSCAAA 61
Query: 503 XXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLI 562
+HA+++K ++ VG AL+DMY KC ++ +R +FD++P RN + WN +I
Sbjct: 62 FRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMI 121
Query: 563 MAYGMHGKGEEALELFRRM----------------VAEKDSNK------------EIRPN 594
Y GK +EA+EL+ M V +D + +PN
Sbjct: 122 SHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPN 181
Query: 595 EVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLI 654
+T +A+ +ACS G + H+ + IEP + LV+ GR G + +
Sbjct: 182 LITLLALVSACSAIGAF-RLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVF 240
Query: 655 KTMPSNMKKVDAWSSLLGACKIHQNLE--VGEIAAKQLLVLEPNVASHYVLLSNIYSSAG 712
+M + V AWSSL+ A +H + E + +L + P+ + +L S AG
Sbjct: 241 DSMED--RDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKAC-SHAG 297
Query: 713 LWDQAMDIRKKMK-EMGVR 730
L D+A+ K+M+ + G+R
Sbjct: 298 LADEALVYFKRMQGDYGLR 316
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 133/300 (44%), Gaps = 48/300 (16%)
Query: 192 LGKQVHAYTFR-NGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLS 250
LG VHA++ + N F AL+ MY K + A+ LF ++ V WN +IS +
Sbjct: 66 LGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYT 125
Query: 251 QNDRFEEA---------------------------------LLFLYHMLQSGVRPDGVTL 277
+ +EA + F M++ +P+ +TL
Sbjct: 126 HCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITL 185
Query: 278 ASALPACSHLEMLRTGKEIHGYALRNTDLID-NSFVGSALVDMYCNCKKADKGRWVFDGI 336
+ + ACS + R KEIH YA RN LI+ + + S LV+ Y C + VFD +
Sbjct: 186 LALVSACSAIGAFRLIKEIHSYAFRN--LIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSM 243
Query: 337 LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDK 396
R V W+++I+ YA + + A+K F EM + TP+ ++L AC A L
Sbjct: 244 EDRDVVAWSSLISAYALHGDAESALKTFQEMEL-AKVTPDDIAFLNVLKAC--SHAGLAD 300
Query: 397 EGIHGYVVKRG-----FEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIV-SWNTMI 450
E + + +G KD Y + L+D+ SR+GR E + + +M + +W ++
Sbjct: 301 EALVYFKRMQGDYGLRASKDHY--SCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALL 358
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 141/343 (41%), Gaps = 54/343 (15%)
Query: 52 FLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVAN 111
FLQ S++A +P D F LK+ A LG +H H K + S V
Sbjct: 35 FLQMHSSFA------LPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPF-VGC 87
Query: 112 SLVNMYGKCGDLAGAHHVFDRISDRDHV-------------------------------- 139
+L++MYGKC ++ A +FD I R+ V
Sbjct: 88 ALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNES 147
Query: 140 SWNSMIAAACRFX-XXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHA 198
S+N++I P TL+++ ACS + L K++H+
Sbjct: 148 SFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAI-GAFRLIKEIHS 206
Query: 199 YTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEE 257
Y FRN + + LV Y + G I + +F +D+D+V+W+++IS+ + + E
Sbjct: 207 YAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAES 266
Query: 258 ALLFLYHMLQSGVRPDGVTLASALPACSHL----EMLRTGKEIHG-YALRNTDLIDNSFV 312
AL M + V PD + + L ACSH E L K + G Y LR + D+
Sbjct: 267 ALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASK--DHY-- 322
Query: 313 GSALVDMYCNCKKADKGRWVFDGILRR-TVAVWNAMIAGYARN 354
S LVD+ + ++ V + + T W A++ G RN
Sbjct: 323 -SCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALL-GACRN 363
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 11/211 (5%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+AI Y M+ P+ A++ A + + L K+IH + F+ + + L
Sbjct: 165 RAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFR-NLIEPHPQLKSGL 223
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
V YG+CG + VFD + DRD V+W+S+I+A V P
Sbjct: 224 VEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDD 283
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFR-NGDWRTFTN----NALVTMYAKLGRIDEAK 228
+++ ACS+ L + Y R GD+ + + LV + +++GR +EA
Sbjct: 284 IAFLNVLKACSH----AGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAY 339
Query: 229 ALFGLFDDKDLV-SWNTVISSLSQNDRFEEA 258
+ +K +W ++ + E A
Sbjct: 340 KVIQAMPEKPTAKTWGALLGACRNYGEIELA 370
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/392 (35%), Positives = 217/392 (55%), Gaps = 17/392 (4%)
Query: 380 LSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD 439
LSS + +C + F G H +K GF D Y+ ++L+ +Y G +E + +F M
Sbjct: 123 LSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMP 182
Query: 440 RRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
R++VSW MI+G+ R D L L M++ D PN T +L C
Sbjct: 183 ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD-----------PNDYTFTALLSAC 231
Query: 500 XXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWN 559
+H L L + + + ++LI MY KCG L + +FDQ ++V++WN
Sbjct: 232 TGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWN 291
Query: 560 VLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFH 619
+I Y HG +A+ELF M+ + + +P+ +TY+ + ++C H+G+V EG F+
Sbjct: 292 SMIAGYAQHGLAMQAIELFELMMPKSGT----KPDAITYLGVLSSCRHAGLVKEGRKFFN 347
Query: 620 TMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQN 679
M A HG++P +HY+CLVDLLGR G ++EA +LI+ MP V W SLL +C++H +
Sbjct: 348 LM-AEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSV-IWGSLLFSCRVHGD 405
Query: 680 LEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIE 739
+ G AA++ L+LEP+ A+ +V L+N+Y+S G W +A +RK MK+ G++ PGCSWIE
Sbjct: 406 VWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIE 465
Query: 740 HRDEVHKFLAGDASHPQSKELHEYLENLLQRM 771
+ V F A D S+ + E+ L L+ M
Sbjct: 466 INNYVFMFKAEDGSNCRMLEIVHVLHCLIDHM 497
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 138/298 (46%), Gaps = 13/298 (4%)
Query: 273 DGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWV 332
D L+SA+ +C RTG H AL+ I + ++GS+LV +Y + + + V
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKG-GFISDVYLGSSLVVLYRDSGEVENAYKV 177
Query: 333 FDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKA 392
F+ + R V W AMI+G+A+ D +KL+ +M +S PN T ++LL AC A
Sbjct: 178 FEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKM-RKSTSDPNDYTFTALLSACTGSGA 236
Query: 393 FLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITG 452
+H + G + ++ N+L+ MY + G ++ + IF +D+VSWN+MI G
Sbjct: 237 LGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAG 296
Query: 453 YVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIH 512
Y G A+ L M KP+++T + VL C +
Sbjct: 297 YAQHGLAMQAIELFELMMPKSGT----------KPDAITYLGVLSSCRHAGLVKEGRKFF 346
Query: 513 AYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR-NVITWNVLIMAYGMHG 569
+ L ++ S L+D+ + G L + + + MP + N + W L+ + +HG
Sbjct: 347 NLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHG 404
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 123/241 (51%), Gaps = 11/241 (4%)
Query: 64 AAGVPPDNFAFPAVLKAAA----GVN-DLNLGKQIHGHVFKFGYASTSVAVANSLVNMYG 118
++ V D ++F A ++A G+N D G H K G+ S V + +SLV +Y
Sbjct: 108 SSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFIS-DVYLGSSLVVLYR 166
Query: 119 KCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVS 178
G++ A+ VF+ + +R+ VSW +MI+ + DP +T +
Sbjct: 167 DSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTA 226
Query: 179 IAHACSNLRDGLSLGKQVHAYTFRNGDWRTF--TNNALVTMYAKLGRIDEAKALFGLFDD 236
+ AC+ L G+ VH T G +++ +N+L++MY K G + +A +F F +
Sbjct: 227 LLSACTG-SGALGQGRSVHCQTLHMG-LKSYLHISNSLISMYCKCGDLKDAFRIFDQFSN 284
Query: 237 KDLVSWNTVISSLSQNDRFEEAL-LFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKE 295
KD+VSWN++I+ +Q+ +A+ LF M +SG +PD +T L +C H +++ G++
Sbjct: 285 KDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRK 344
Query: 296 I 296
Sbjct: 345 F 345
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 135/293 (46%), Gaps = 11/293 (3%)
Query: 173 SFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDEAKALF 231
++ L S +C RD G H + G + ++LV +Y G ++ A +F
Sbjct: 120 AYGLSSAVRSCGLNRD-FRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 232 GLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLR 291
++++VSW +IS +Q R + L M +S P+ T + L AC+ L
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 292 TGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGY 351
G+ +H L + L + ++L+ MYC C +FD + V WN+MIAGY
Sbjct: 239 QGRSVHCQTL-HMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGY 297
Query: 352 ARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEG--IHGYVVKRGFE 409
A++ +AI+LF M+ +S P++ T +L +C A L KEG + + G +
Sbjct: 298 AQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRH--AGLVKEGRKFFNLMAEHGLK 355
Query: 410 KDKYVQNALMDMYSRMGRIEISKSIFGSMDRR-DIVSWNTMITGYVVCGRHDD 461
+ + L+D+ R G ++ + + +M + + V W +++ C H D
Sbjct: 356 PELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL---FSCRVHGD 405
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+ +W + AQ + Y+ M + P+++ F A+L A G L G+ +
Sbjct: 184 RNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSV 243
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAA 147
H G S + ++NSL++MY KCGDL A +FD+ S++D VSWNSMIA
Sbjct: 244 HCQTLHMGLKSY-LHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAG 296
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 260 bits (665), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 180/654 (27%), Positives = 307/654 (46%), Gaps = 114/654 (17%)
Query: 172 TSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKAL 230
T LVS +C++ D ++ G+Q+H ++G D + N+++ MYAK + +A+++
Sbjct: 40 TERALVSALGSCASSND-VTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESV 98
Query: 231 F----------------------------GLFD---DKDLVSWNTVISSLSQNDRFEEAL 259
F LFD ++ VS+ T+I +QN+++ EA+
Sbjct: 99 FRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAM 158
Query: 260 LFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDM 319
M G+ + VTLA+ + ACSHL + + + A++ L FV + L+ M
Sbjct: 159 ELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIK-LKLEGRVFVSTNLLHM 217
Query: 320 YCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIE------------- 366
YC C R +FD + R + WN M+ GY++ ++A +LF +
Sbjct: 218 YCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMI 277
Query: 367 ------------MVYESDF-----TPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFE 409
+VY ++ P+ + LL A R +HG +VKRGF+
Sbjct: 278 DGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFD 337
Query: 410 KDKYVQ-------------------------------NALMDMYSRMGRIEISKSIFGSM 438
++Q NAL+ + + G +E ++ +F
Sbjct: 338 CYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQT 397
Query: 439 DRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPG 498
+DI SWN MI+GY AL+L +M S +KP+++T+++V
Sbjct: 398 HDKDIFSWNAMISGYAQSLSPQLALHLFREMI----------SSSQVKPDAITMVSVFSA 447
Query: 499 CXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQ---MPTRNV 555
H Y + + + +A+IDMYAKCG + + +F Q + + +
Sbjct: 448 ISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTI 507
Query: 556 ITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGL 615
WN +I HG + AL+L+ + + I+PN +T++ + +AC H+G+V+ G
Sbjct: 508 SPWNAIICGSATHGHAKLALDLYSDL-----QSLPIKPNSITFVGVLSACCHAGLVELGK 562
Query: 616 NLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACK 675
F +MK++HGIEP HY C+VDLLG++GR+EEA ++IK MP V W LL A +
Sbjct: 563 TYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVK-ADVMIWGMLLSASR 621
Query: 676 IHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGV 729
H N+E+ E+AA +L ++P+ V+LSN+Y+ AG W+ +R++M+ V
Sbjct: 622 THGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDV 675
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 140/299 (46%), Gaps = 37/299 (12%)
Query: 372 DFTPNST----TLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGR 427
DF+ S+ L S L +C IH V+K G + + Y+ N++++MY++
Sbjct: 32 DFSGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRL 91
Query: 428 IEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDM----------------QR 471
+ ++S+F + D S+N M+ GYV R DAL L M Q
Sbjct: 92 LADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQN 151
Query: 472 GQDDE----YEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVG 527
Q E + + ++ + N VTL TV+ C + + A+K KL + V
Sbjct: 152 NQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVS 211
Query: 528 SALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDS 587
+ L+ MY C CL +R +FD+MP RN++TWNV++ Y G E+A ELF + + EKD
Sbjct: 212 TNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQ-ITEKDI 270
Query: 588 NKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGR 646
V++ + C +DE L +++T G++PS +VDLL S R
Sbjct: 271 --------VSWGTMIDGCLRKNQLDEAL-VYYTEMLRCGMKPSE---VMMVDLLSASAR 317
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 116/281 (41%), Gaps = 46/281 (16%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGY----------- 102
+A+ Y M+ G+ P +L A+A + G Q+HG + K G+
Sbjct: 288 EALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATII 347
Query: 103 -----------------ASTS--VAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNS 143
AS +A N+L+ + K G + A VFD+ D+D SWN+
Sbjct: 348 HFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNA 407
Query: 144 MIAA-ACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFR 202
MI+ A V P + T+VS+ A S+L L GK+ H Y
Sbjct: 408 MISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSL-GSLEEGKRAHDYL-- 464
Query: 203 NGDWRTFTNN-----ALVTMYAKLGRIDEAKALFGL---FDDKDLVSWNTVISSLSQNDR 254
++ T N A++ MYAK G I+ A +F + WN +I + +
Sbjct: 465 --NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGH 522
Query: 255 FEEALLFLYHMLQS-GVRPDGVTLASALPACSHLEMLRTGK 294
+ A L LY LQS ++P+ +T L AC H ++ GK
Sbjct: 523 AKLA-LDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGK 562
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 259 bits (663), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 156/502 (31%), Positives = 255/502 (50%), Gaps = 35/502 (6%)
Query: 242 WNTVISSLSQNDRFEEALLFLYHMLQSGV-RPDGVTLASALPACSHLEMLRTGKEIHGYA 300
WN +I S F E + L M+++G+ RPD T + CS+ +R G +HG
Sbjct: 77 WNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLV 136
Query: 301 LRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEA 360
LR + VG++ VD Y CK R VF + R W A++ Y ++ +EA
Sbjct: 137 LR-IGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEA 195
Query: 361 IKLFIEMVYESDFTP--NSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNAL 418
+F D P N + ++L+ V+ ++ + + + KR D ++
Sbjct: 196 KSMF-------DLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKR----DIISYTSM 244
Query: 419 MDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYE 478
+D Y++ G + ++ +F D+ +W+ +I GY G+ ++A + +M
Sbjct: 245 IDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKN----- 299
Query: 479 DDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLA--TDIAVGSALIDMYAK 536
+KP+ ++ ++ C ++ +Y L Q++ + V ALIDM AK
Sbjct: 300 ------VKPDEFIMVGLMSACSQMGCFELCEKVDSY-LHQRMNKFSSHYVVPALIDMNAK 352
Query: 537 CGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEV 596
CG ++ + +F++MP R+++++ ++ +HG G EA+ LF +MV E I P+EV
Sbjct: 353 CGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEG-----IVPDEV 407
Query: 597 TYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKT 656
+ I C S +V+EGL F M+ + I S DHY+C+V+LL R+G+++EAY+LIK+
Sbjct: 408 AFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKS 467
Query: 657 MPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQ 716
MP AW SLLG C +H N E+ E+ A+ L LEP A YVLLSNIY++ W
Sbjct: 468 MPFE-AHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTD 526
Query: 717 AMDIRKKMKEMGVRKEPGCSWI 738
+R KM E G+ K G SWI
Sbjct: 527 VAHLRDKMNENGITKICGRSWI 548
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 197/439 (44%), Gaps = 32/439 (7%)
Query: 35 SPSAWIDHLRLQAQSSSFL--QAISTYANMVAAGVP-PDNFAFPAVLKAAAGVNDLNLGK 91
SP ++ + ++ S+ FL + +S M+ G+ PD + FP V+K + + +G
Sbjct: 71 SPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGS 130
Query: 92 QIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRF 151
+HG V + G+ V V S V+ YGKC DL A VF + +R+ VSW +++ A +
Sbjct: 131 SVHGLVLRIGF-DKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKS 189
Query: 152 XXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGL-SLGKQVHAYTFRNGDWR--T 208
N+ + + L DGL G V+A + +
Sbjct: 190 GELEEAKSMFDLMPERNLG-----------SWNALVDGLVKSGDLVNAKKLFDEMPKRDI 238
Query: 209 FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQS 268
+ +++ YAK G + A+ LF D+ +W+ +I +QN + EA M
Sbjct: 239 ISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAK 298
Query: 269 GVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADK 328
V+PD + + ACS + +++ Y + + + +V AL+DM C D+
Sbjct: 299 NVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDR 358
Query: 329 GRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACV 388
+F+ + +R + + +M+ G A + EAI+LF +MV E P+ + +L C
Sbjct: 359 AAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEG-IVPDEVAFTVILKVCG 417
Query: 389 RCKAFLDKEGIHGYVVKRG-----FEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDI 443
+ + L +EG+ + + R D Y + ++++ SR G+++ + + SM
Sbjct: 418 QSR--LVEEGLRYFELMRKKYSILASPDHY--SCIVNLLSRTGKLKEAYELIKSMPFEAH 473
Query: 444 VS-WNTMITGYVVCGRHDD 461
S W +++ G C H +
Sbjct: 474 ASAWGSLLGG---CSLHGN 489
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/458 (23%), Positives = 185/458 (40%), Gaps = 41/458 (8%)
Query: 129 VFDRISDRDHVSWNSMIAA-ACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLR 187
VF+R+ WN +I + +F P +T + CSN
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSN-N 123
Query: 188 DGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVI 246
+ +G VH R G D + V Y K + A+ +FG +++ VSW ++
Sbjct: 124 GQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV 183
Query: 247 SSLSQNDRFEEALLFLYHMLQSGVRP-----DGVTLASALPACSHLEMLRTGKEIHGYAL 301
+ ++ EEA M + + DG+ + L L ++I Y
Sbjct: 184 VAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISY-- 241
Query: 302 RNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAI 361
T +ID G +V R +F+ V W+A+I GYA+N +EA
Sbjct: 242 --TSMIDGYAKGGDMVS----------ARDLFEEARGVDVRAWSALILGYAQNGQPNEAF 289
Query: 362 KLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFE-KDKYVQNALMD 420
K+F EM + + P+ + L+ AC + F E + Y+ +R + YV AL+D
Sbjct: 290 KVFSEMCAK-NVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALID 348
Query: 421 MYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDD 480
M ++ G ++ + +F M +RD+VS+ +M+ G + G +A+ L M D
Sbjct: 349 MNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMV---------D 399
Query: 481 ESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVG---SALIDMYAKC 537
E I P+ V +L C + + L +K + +A S ++++ ++
Sbjct: 400 EGIV--PDEVAFTVILKVCGQSRLVEEG--LRYFELMRKKYSILASPDHYSCIVNLLSRT 455
Query: 538 GCLNLSRIVFDQMPTR-NVITWNVLIMAYGMHGKGEEA 574
G L + + MP + W L+ +HG E A
Sbjct: 456 GKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIA 493
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 178/432 (41%), Gaps = 61/432 (14%)
Query: 375 PNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYV-QNALMDMYSRMGRIEISKS 433
P+ +L +L C K+ + IH ++++G E+D+ + + S + S S
Sbjct: 8 PSLLSLETLFKLC---KSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSS 64
Query: 434 IFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLM 493
+F + WN +I GY + +++L M R + +P+ T
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMR----------TGLARPDEYTFP 114
Query: 494 TVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR 553
V+ C +H L+ D+ VG++ +D Y KC L +R VF +MP R
Sbjct: 115 LVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPER 174
Query: 554 NVITWNVLIMAYGMHGKGEEALELFRRMV----------------------AEKDSNKEI 591
N ++W L++AY G+ EEA +F M A+K ++
Sbjct: 175 NAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMP 234
Query: 592 RPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAY 651
+ + ++Y ++ + G + +LF + G++ + ++ L+ ++G+ EA+
Sbjct: 235 KRDIISYTSMIDGYAKGGDMVSARDLFEEAR---GVDVRA--WSALILGYAQNGQPNEAF 289
Query: 652 KLIKTMPSNMKKVDAW--SSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVL--LSNI 707
K+ M + K D + L+ AC E+ E L +SHYV+ L ++
Sbjct: 290 KVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDM 349
Query: 708 YSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENL 767
+ G D+A + ++M + + CS +E G A H E L
Sbjct: 350 NAKCGHMDRAAKLFEEMPQRDLVSY--CSMME----------GMAIHGCGSEAI----RL 393
Query: 768 LQRMRKEGYVPD 779
++M EG VPD
Sbjct: 394 FEKMVDEGIVPD 405
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 259 bits (663), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 172/667 (25%), Positives = 308/667 (46%), Gaps = 63/667 (9%)
Query: 62 MVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCG 121
+ A+ P + + + ++ + + +++ H+ F + + N + YGKCG
Sbjct: 52 LFASPEPVSYWLYERLFRSCSSKALVVQARKVQSHLVTFS-PLPPIFLLNRAIEAYGKCG 110
Query: 122 DLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAH 181
+ A +F+ + +RD SWN++I A + V T + +
Sbjct: 111 CVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLK 170
Query: 182 ACSNLRDGLSLGKQVHAYTFRNGDWRTFTNN-----ALVTMYAKLGRIDEAKALFGLFDD 236
+C + D L L +Q+H + G ++ N ++V +Y K + +A+ +F +
Sbjct: 171 SCGLILD-LRLLRQLHCAVVKYG----YSGNVDLETSIVDVYGKCRVMSDARRVFDEIVN 225
Query: 237 KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEI 296
VSWN ++ + +EA++ + ML+ VRP T++S + ACS L GK I
Sbjct: 226 PSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVI 285
Query: 297 HGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFD--------------------GI 336
H A++ ++ ++ V +++ DMY C + + R VFD G+
Sbjct: 286 HAIAVK-LSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGL 344
Query: 337 LR-----------RTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLP 385
R R + WNAM+ GY DEA+ M E + N TL +L
Sbjct: 345 TREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDN-VTLVWILN 403
Query: 386 ACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSM-DRRDIV 444
C + HG++ + G++ + V NAL+DMY + G ++ + F M + RD V
Sbjct: 404 VCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEV 463
Query: 445 SWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXX 504
SWN ++TG GR + AL+ MQ + KP+ TL T+L GC
Sbjct: 464 SWNALLTGVARVGRSEQALSFFEGMQ------------VEAKPSKYTLATLLAGCANIPA 511
Query: 505 XXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMA 564
IH + ++ D+ + A++DMY+KC C + + VF + TR++I WN +I
Sbjct: 512 LNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRG 571
Query: 565 YGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKAN 624
+G+ +E ELF M+ E N+ ++P+ VT++ I AC G V+ G F +M
Sbjct: 572 CCRNGRSKEVFELF--MLLE---NEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTK 626
Query: 625 HGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGE 684
+ I P +HY C+++L + G + + + + MP + + + + AC+ ++ ++G
Sbjct: 627 YHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFD-PPMQMLTRINDACQRYRWSKLGA 685
Query: 685 IAAKQLL 691
AAK+L+
Sbjct: 686 WAAKRLM 692
Score = 192 bits (488), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 154/565 (27%), Positives = 252/565 (44%), Gaps = 64/565 (11%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R +W + AQ+ + + M GV +F VLK+ + DL L +Q+
Sbjct: 125 RDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQL 184
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
H V K+GY S +V + S+V++YGKC ++ A VFD I + VSWN ++
Sbjct: 185 HCAVVKYGY-SGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGF 243
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTF------------ 201
NV P + T+ S+ ACS L +GK +HA
Sbjct: 244 NDEAVVMFFKMLELNVRPLNHTVSSVMLACSR-SLALEVGKVIHAIAVKLSVVADTVVST 302
Query: 202 ----------------------RNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDL 239
R+ D +++T+ ++ YA G EA+ LF L ++++
Sbjct: 303 SVFDMYVKCDRLESARRVFDQTRSKDLKSWTSA--MSGYAMSGLTREARELFDLMPERNI 360
Query: 240 VSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGY 299
VSWN ++ ++EAL FL M Q D VTL L CS + ++ GK+ HG+
Sbjct: 361 VSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGF 420
Query: 300 ALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI--LRRTVAVWNAMIAGYARNEFD 357
R+ N V +AL+DMY C F + LR V+ WNA++ G AR
Sbjct: 421 IYRH-GYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVS-WNALLTGVARVGRS 478
Query: 358 DEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNA 417
++A+ F M E+ P+ TL++LL C A + IHG++++ G++ D ++ A
Sbjct: 479 EQALSFFEGMQVEAK--PSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGA 536
Query: 418 LMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEY 477
++DMYS+ + + +F RD++ WN++I G GR + L +
Sbjct: 537 MVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLL-------- 588
Query: 478 EDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXE-IHAYALKQKLATDIAVGSALIDMYAK 536
E+ +KP+ VT + +L C + + + K ++ + +I++Y K
Sbjct: 589 ---ENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCK 645
Query: 537 CGCLN-----LSRIVFD---QMPTR 553
GCL+ L + FD QM TR
Sbjct: 646 YGCLHQLEEFLLLMPFDPPMQMLTR 670
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/481 (32%), Positives = 251/481 (52%), Gaps = 49/481 (10%)
Query: 291 RTGKEIHGYALRNTDLIDNSF-----VGSALVDMYCNCKKADKGRWVFDGILRRTVAVWN 345
+ GK+IH D+I F + L+ ++ C R VFD + + T++ +N
Sbjct: 51 KAGKKIHA------DIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYN 104
Query: 346 AMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC-VRCKAFLDKEG----IH 400
MI+GY ++ E + L M Y + + TLS +L A R + +H
Sbjct: 105 YMISGYLKHGLVKELLLLVQRMSYSGE-KADGYTLSMVLKASNSRGSTMILPRSLCRLVH 163
Query: 401 GYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHD 460
++K E D + AL+D Y + G++E ++++F +M ++V +MI+GY+ G +
Sbjct: 164 ARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVE 223
Query: 461 DALNLLHDMQ----------------RGQDDEYEDDESIPLK-----PNSVTLMTVLPGC 499
DA + + + G+ + D I ++ PN T +V+ C
Sbjct: 224 DAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGAC 283
Query: 500 XXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWN 559
++HA +K + T I +GS+L+DMYAKCG +N +R VFDQM +NV +W
Sbjct: 284 SVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWT 343
Query: 560 VLIMAYGMHGKGEEALELFRRMVAEKDSNKEIR--PNEVTYIAIFAACSHSGMVDEGLNL 617
+I YG +G EEALELF RM KE R PN VT++ +ACSHSG+VD+G +
Sbjct: 344 SMIDGYGKNGNPEEALELFTRM-------KEFRIEPNYVTFLGALSACSHSGLVDKGYEI 396
Query: 618 FHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIH 677
F +M+ ++ ++P +HYAC+VDL+GR+G + +A++ + MP D W++LL +C +H
Sbjct: 397 FESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPER-PDSDIWAALLSSCNLH 455
Query: 678 QNLEVGEIAAKQLLVLEPNV-ASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCS 736
N+E+ IAA +L L + Y+ LSN+Y+S WD IR+ MK + K G S
Sbjct: 456 GNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Query: 737 W 737
W
Sbjct: 516 W 516
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 163/380 (42%), Gaps = 52/380 (13%)
Query: 90 GKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAAC 149
GK+IH + K G+ + ++ L+ ++ KCG L+ A VFD + ++N MI+
Sbjct: 53 GKKIHADIIKTGF-QPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYL 111
Query: 150 RFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGL-----SLGKQVHAYTFR-N 203
+ +TL + A SN R SL + VHA + +
Sbjct: 112 KHGLVKELLLLVQRMSYSGEKADGYTLSMVLKA-SNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 204 GDWRTFTNNALVTMYAKLGRIDEAKALF---------------------GLFDD------ 236
+ ALV Y K G+++ A+ +F G +D
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 237 ----KDLVSWNTVISSLSQNDRFEEALLFLY-HMLQSGVRPDGVTLASALPACSHLEMLR 291
KD+V +N ++ S++ + + +Y M ++G P+ T AS + ACS L
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 292 TGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGY 351
G+++H ++ + + + +GS+L+DMY C + R VFD + + V W +MI GY
Sbjct: 291 VGQQVHAQIMK-SGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGY 349
Query: 352 ARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKD 411
+N +EA++LF M E PN T L AC +DK GY + ++D
Sbjct: 350 GKNGNPEEALELFTRM-KEFRIEPNYVTFLGALSACSH-SGLVDK----GYEIFESMQRD 403
Query: 412 KYVQNALMDMYS----RMGR 427
Y M+ Y+ MGR
Sbjct: 404 -YSMKPKMEHYACIVDLMGR 422
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+++ Y +M AG P+ F +V+ A + + +G+Q+H + K G T + + +SL
Sbjct: 256 RSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSG-VYTHIKMGSSL 314
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTS 173
++MY KCG + A VFD++ +++ SW SMI + ++P
Sbjct: 315 LDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNY 374
Query: 174 FTLVSIAHACSN 185
T + ACS+
Sbjct: 375 VTFLGALSACSH 386
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 256 bits (653), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 149/446 (33%), Positives = 242/446 (54%), Gaps = 28/446 (6%)
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYES--DFTPNSTTLSSLLPACVR 389
+FD I V++ MI +R+ ++ F+ MV E D TP+ T L+ AC++
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK 128
Query: 390 CKAFLDKEGIHGYVVKRG-FEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNT 448
F + IH +VVK G F D +VQ ++ +Y + ++ +F + + D+V W+
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDV 188
Query: 449 MITGYVVCGRHDDALNLLHDMQ-RGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXX 507
++ GYV CG + L + +M RG ++P+ ++ T L C
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVRG------------IEPDEFSVTTALTACAQVGALAQ 236
Query: 508 XXEIHAYALKQK-LATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYG 566
IH + K++ + +D+ VG+AL+DMYAKCGC+ + VF+++ RNV +W LI Y
Sbjct: 237 GKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYA 296
Query: 567 MHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHG 626
+G ++A R+ E I+P+ V + + AAC+H G ++EG + M+A +G
Sbjct: 297 AYGYAKKATTCLDRIEREDG----IKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYG 352
Query: 627 IEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKV-DAWSSLLGACKIHQNLEVGEI 685
I P +HY+C+VDL+ R+GR+++A LI+ MP MK + W +LL C+ H+N+E+GE+
Sbjct: 353 ITPKHEHYSCIVDLMCRAGRLDDALDLIEKMP--MKPLASVWGALLNGCRTHKNVELGEL 410
Query: 686 AAKQLLVLEP-NVASH---YVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHR 741
A + LL LE NV V LSNIY S +A +R +++ G+RK PG S +E
Sbjct: 411 AVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVD 470
Query: 742 DEVHKFLAGDASHPQSKELHEYLENL 767
V KF++GD SHP ++H + L
Sbjct: 471 GIVTKFVSGDVSHPNLLQIHTLIHLL 496
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 150/315 (47%), Gaps = 20/315 (6%)
Query: 194 KQVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDE----AKALFGLFDDKDLVSWNTVISS 248
K H+ +G R T+ + L+T + L +++ A ++F + + ++T+I
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRI 87
Query: 249 LSQNDRFEEALLFLYHML---QSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTD 305
S++ + L + M+ + + P +T + AC GK+IH + ++N
Sbjct: 88 CSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGV 147
Query: 306 LIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFI 365
+ + V + ++ +Y K R VFD I + V W+ ++ GY R E +++F
Sbjct: 148 FLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFK 207
Query: 366 EMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYV-VKRGFEKDKYVQNALMDMYSR 424
EM+ P+ ++++ L AC + A + IH +V KR E D +V AL+DMY++
Sbjct: 208 EMLVRG-IEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAK 266
Query: 425 MGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIP 484
G IE + +F + RR++ SW +I GY G A L ++R ED
Sbjct: 267 CGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIER------EDG---- 316
Query: 485 LKPNSVTLMTVLPGC 499
+KP+SV L+ VL C
Sbjct: 317 IKPDSVVLLGVLAAC 331
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 145/316 (45%), Gaps = 20/316 (6%)
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRT--FTNNALVTMYAKLGRIDEAKALF 231
F +V+ AC S+GKQ+H + +NG + + ++ +Y + + +A+ +F
Sbjct: 121 FLIVACLKACF-----FSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVF 175
Query: 232 GLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLR 291
D+V W+ +++ + E L ML G+ PD ++ +AL AC+ + L
Sbjct: 176 DEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALA 235
Query: 292 TGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGY 351
GK IH + + + + FVG+ALVDMY C + VF+ + RR V W A+I GY
Sbjct: 236 QGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGY 295
Query: 352 ARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLD--KEGIHGYVVKRGFE 409
A + +A + E P+S L +L AC FL+ + + + G
Sbjct: 296 AAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAH-GGFLEEGRTMLENMEARYGIT 354
Query: 410 KDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVS-WNTMITGYVVCGRHDD------A 462
+ ++D+ R GR++ + + M + + S W ++ G C H + A
Sbjct: 355 PKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG---CRTHKNVELGELA 411
Query: 463 LNLLHDMQRGQDDEYE 478
+ L D+++G +E E
Sbjct: 412 VQNLLDLEKGNVEEEE 427
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 7/289 (2%)
Query: 67 VPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGA 126
+ P F ++ A ++GKQIH V K G + V ++ +Y + L A
Sbjct: 112 ITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDA 171
Query: 127 HHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNL 186
VFD I D V W+ ++ R ++P F++ + AC+ +
Sbjct: 172 RKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQV 231
Query: 187 RDGLSLGKQVHAYTFRNGDW---RTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWN 243
L+ GK +H + + W F ALV MYAK G I+ A +F +++ SW
Sbjct: 232 -GALAQGKWIHEFV-KKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWA 289
Query: 244 TVISSLSQNDRFEEALLFLYHM-LQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALR 302
+I + ++A L + + G++PD V L L AC+H L G+ +
Sbjct: 290 ALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEA 349
Query: 303 NTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVA-VWNAMIAG 350
+ S +VD+ C + D + + + + +A VW A++ G
Sbjct: 350 RYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 9/219 (4%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+ + + M+ G+ PD F+ L A A V L GK IH V K + + V V +L
Sbjct: 201 EGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTAL 260
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXN-VDPT 172
V+MY KCG + A VF++++ R+ SW ++I + + + P
Sbjct: 261 VDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPD 320
Query: 173 SFTLVSIAHACSN---LRDGLSLGKQVHAYTFRNGDWRTFTN-NALVTMYAKLGRIDEAK 228
S L+ + AC++ L +G ++ + + A R G + + +V + + GR+D+A
Sbjct: 321 SVVLLGVLAACAHGGFLEEGRTMLENMEA---RYGITPKHEHYSCIVDLMCRAGRLDDAL 377
Query: 229 ALFGLFDDKDLVS-WNTVISSLSQNDRFEEALLFLYHML 266
L K L S W +++ + E L + ++L
Sbjct: 378 DLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLL 416
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 255 bits (651), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/489 (31%), Positives = 254/489 (51%), Gaps = 26/489 (5%)
Query: 281 LPACSHLE-MLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRR 339
L CS ++ +L+ +IH +L+N I + V + + + K R +
Sbjct: 20 LKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSL---AKDLAFARTLLLHSSDS 76
Query: 340 TVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGI 399
T + WN + GY+ ++ E+I ++ EM PN T LL AC I
Sbjct: 77 TPSTWNMLSRGYSSSDSPVESIWVYSEM-KRRGIKPNKLTFPFLLKACASFLGLTAGRQI 135
Query: 400 HGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRH 459
V+K GF+ D YV N L+ +Y + ++ +F M R++VSWN+++T V G+
Sbjct: 136 QVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKL 195
Query: 460 DDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQK 519
+ +M + P+ T++ +L C +H+ + ++
Sbjct: 196 NLVFECFCEMIGKR-----------FCPDETTMVVLLSACGGNLSLGKL--VHSQVMVRE 242
Query: 520 LATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFR 579
L + +G+AL+DMYAK G L +R+VF++M +NV TW+ +I+ +G EEAL+LF
Sbjct: 243 LELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFS 302
Query: 580 RMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVD 639
+M+ E +RPN VT++ + ACSH+G+VD+G FH M+ H I+P HY +VD
Sbjct: 303 KMMKESS----VRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVD 358
Query: 640 LLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLE---VGEIAAKQLLVLEPN 696
+LGR+GR+ EAY IK MP V W +LL AC IH + + +GE K+L+ LEP
Sbjct: 359 ILGRAGRLNEAYDFIKKMPFEPDAV-VWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPK 417
Query: 697 VASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQ 756
+ + V+++N ++ A +W +A ++R+ MKE ++K G S +E H+F +G +
Sbjct: 418 RSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSE 477
Query: 757 SKELHEYLE 765
++E L+
Sbjct: 478 YVSIYELLD 486
Score = 136 bits (343), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 130/261 (49%), Gaps = 6/261 (2%)
Query: 35 SPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIH 94
+PS W R + S S +++I Y+ M G+ P+ FP +LKA A L G+QI
Sbjct: 77 TPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQ 136
Query: 95 GHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXX 154
V K G+ V V N+L+++YG C + A VFD +++R+ VSWNS++ A
Sbjct: 137 VEVLKHGF-DFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKL 195
Query: 155 XXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTF-RNGDWRTFTNNA 213
P T+V + AC LSLGK VH+ R + A
Sbjct: 196 NLVFECFCEMIGKRFCPDETTMVVLLSACGG---NLSLGKLVHSQVMVRELELNCRLGTA 252
Query: 214 LVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEAL-LFLYHMLQSGVRP 272
LV MYAK G ++ A+ +F DK++ +W+ +I L+Q EEAL LF M +S VRP
Sbjct: 253 LVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRP 312
Query: 273 DGVTLASALPACSHLEMLRTG 293
+ VT L ACSH ++ G
Sbjct: 313 NYVTFLGVLCACSHTGLVDDG 333
Score = 129 bits (325), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 189/429 (44%), Gaps = 23/429 (5%)
Query: 183 CSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSW 242
CS+++ L + Q+H + +N D + V+ + + A+ L D +W
Sbjct: 23 CSSIKHLLQIHGQIHLSSLQN-DSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTW 81
Query: 243 NTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALR 302
N + S +D E++ M + G++P+ +T L AC+ L G++I L+
Sbjct: 82 NMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLK 141
Query: 303 NTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIK 362
+ D +VG+ L+ +Y CKK R VFD + R V WN+++ N + +
Sbjct: 142 HGFDFD-VYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFE 200
Query: 363 LFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMY 422
F EM+ + F P+ TT+ LL AC + + +H V+ R E + + AL+DMY
Sbjct: 201 CFCEMIGKR-FCPDETTMVVLLSACGGNLSL--GKLVHSQVMVRELELNCRLGTALVDMY 257
Query: 423 SRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDES 482
++ G +E ++ +F M +++ +W+ MI G G ++AL L M +
Sbjct: 258 AKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESS-------- 309
Query: 483 IPLKPNSVTLMTVLPGCXXXXXXXXXXE-IHAYALKQKLATDIAVGSALIDMYAKCGCLN 541
++PN VT + VL C + H K+ + A++D+ + G LN
Sbjct: 310 --VRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLN 367
Query: 542 LSRIVFDQMPTR-NVITWNVLIMAYGMH------GKGEEALELFRRMVAEKDSNKEIRPN 594
+ +MP + + W L+ A +H G GE+ + + ++ N I N
Sbjct: 368 EAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVAN 427
Query: 595 EVTYIAIFA 603
++A
Sbjct: 428 RFAEARMWA 436
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 253 bits (647), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 156/502 (31%), Positives = 250/502 (49%), Gaps = 18/502 (3%)
Query: 85 NDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSM 144
N + L K+IH K + + N+L++ + GDL A VFD + +++ V+W +M
Sbjct: 96 NGMRLIKRIHAMALK-CFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAM 154
Query: 145 IAAACRFXXXXXXXXXXXXXXXXNVDPTSFTL-VSIAHACSNLRDGLSLGKQVHAYTFRN 203
I ++ + T+ + V + + CS R LG+QVH +
Sbjct: 155 IDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSR-RAEFELGRQVHGNMVKV 213
Query: 204 GDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLY 263
G ++LV YA+ G + A F + ++KD++SW VIS+ S+ +A+
Sbjct: 214 GVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFI 273
Query: 264 HMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNC 323
ML P+ T+ S L ACS + LR G+++H ++ D FVG++L+DMY C
Sbjct: 274 GMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTD-VFVGTSLMDMYAKC 332
Query: 324 KKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSL 383
+ R VFDG+ R W ++IA +AR F +EAI LF ++ N+ T+ S+
Sbjct: 333 GEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLF-RIMKRRHLIANNLTVVSI 391
Query: 384 LPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDI 443
L AC A L + +H ++K EK+ Y+ + L+ +Y + G + ++ + RD+
Sbjct: 392 LRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDV 451
Query: 444 VSWNTMITGYVVCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXX 502
VSW MI+G G +AL+ L +M Q G ++PN T + L C
Sbjct: 452 VSWTAMISGCSSLGHESEALDFLKEMIQEG------------VEPNPFTYSSALKACANS 499
Query: 503 XXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLI 562
IH+ A K +++ VGSALI MYAKCG ++ + VFD MP +N+++W +I
Sbjct: 500 ESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMI 559
Query: 563 MAYGMHGKGEEALELFRRMVAE 584
M Y +G EAL+L RM AE
Sbjct: 560 MGYARNGFCREALKLMYRMEAE 581
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 233/486 (47%), Gaps = 24/486 (4%)
Query: 188 DGLSLGKQVHAYTFRNGDWRT-FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVI 246
+G+ L K++HA + D + + N L++ +LG + A+ +F +K+ V+W +I
Sbjct: 96 NGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMI 155
Query: 247 SSLSQNDRFEEALLFLYHMLQSGVR-PDGVTLASALPACSHLEMLRTGKEIHGYALRNTD 305
+ +EA ++ G+R + L CS G+++HG ++
Sbjct: 156 DGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG- 214
Query: 306 LIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFI 365
+ N V S+LV Y C + FD + + V W A+I+ +R +AI +FI
Sbjct: 215 -VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFI 273
Query: 366 EMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRM 425
M+ F PN T+ S+L AC KA +H VVKR + D +V +LMDMY++
Sbjct: 274 GMLNHW-FLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKC 332
Query: 426 GRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPL 485
G I + +F M R+ V+W ++I + G ++A++L M+R L
Sbjct: 333 GEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRH-----------L 381
Query: 486 KPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRI 545
N++T++++L C E+HA +K + ++ +GS L+ +Y KCG +
Sbjct: 382 IANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFN 441
Query: 546 VFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAAC 605
V Q+P+R+V++W +I G EAL+ + M+ E + PN TY + AC
Sbjct: 442 VLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEG-----VEPNPFTYSSALKAC 496
Query: 606 SHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVD 665
++S + G ++ K NH + A L+ + + G V EA+++ +MP K +
Sbjct: 497 ANSESLLIGRSIHSIAKKNHALSNVFVGSA-LIHMYAKCGFVSEAFRVFDSMPE--KNLV 553
Query: 666 AWSSLL 671
+W +++
Sbjct: 554 SWKAMI 559
Score = 197 bits (500), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 208/419 (49%), Gaps = 7/419 (1%)
Query: 54 QAISTYANMVAAGVPPDN-FAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANS 112
+A + + + V G+ N F +L + + LG+Q+HG++ K G ++ V +S
Sbjct: 166 EAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG--NLIVESS 223
Query: 113 LVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPT 172
LV Y +CG+L A FD + ++D +SW ++I+A R P
Sbjct: 224 LVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPN 283
Query: 173 SFTLVSIAHACSNLRDGLSLGKQVHAYTF-RNGDWRTFTNNALVTMYAKLGRIDEAKALF 231
FT+ SI ACS L G+QVH+ R F +L+ MYAK G I + + +F
Sbjct: 284 EFTVCSILKACSE-EKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVF 342
Query: 232 GLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLR 291
+++ V+W ++I++ ++ EEA+ M + + + +T+ S L AC + L
Sbjct: 343 DGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALL 402
Query: 292 TGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGY 351
GKE+H ++N+ + N ++GS LV +YC C ++ V + R V W AMI+G
Sbjct: 403 LGKELHAQIIKNS-IEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGC 461
Query: 352 ARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKD 411
+ + EA+ EM+ E PN T SS L AC ++ L IH K +
Sbjct: 462 SSLGHESEALDFLKEMIQEG-VEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSN 520
Query: 412 KYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQ 470
+V +AL+ MY++ G + + +F SM +++VSW MI GY G +AL L++ M+
Sbjct: 521 VFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRME 579
Score = 191 bits (484), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/336 (35%), Positives = 173/336 (51%), Gaps = 5/336 (1%)
Query: 53 LQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANS 112
++AI + M+ P+ F ++LKA + L G+Q+H V K T V V S
Sbjct: 266 IKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVK-RMIKTDVFVGTS 324
Query: 113 LVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPT 172
L++MY KCG+++ VFD +S+R+ V+W S+IAA R ++
Sbjct: 325 LMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIAN 384
Query: 173 SFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALF 231
+ T+VSI AC ++ L LGK++HA +N + + + LV +Y K G +A +
Sbjct: 385 NLTVVSILRACGSV-GALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVL 443
Query: 232 GLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLR 291
+D+VSW +IS S EAL FL M+Q GV P+ T +SAL AC++ E L
Sbjct: 444 QQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLL 503
Query: 292 TGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGY 351
G+ IH A +N L N FVGSAL+ MY C + VFD + + + W AMI GY
Sbjct: 504 IGRSIHSIAKKNHAL-SNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGY 562
Query: 352 ARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
ARN F EA+KL M E F + +++L C
Sbjct: 563 ARNGFCREALKLMYRMEAEG-FEVDDYIFATILSTC 597
Score = 162 bits (410), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 191/405 (47%), Gaps = 26/405 (6%)
Query: 271 RPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNS-FVGSALVDMYCNCKKADKG 329
R D LA L + + + ++ K IH AL+ D D + G+ L+
Sbjct: 82 RVDYALLAEWLQSSNGMRLI---KRIHAMALKCFD--DQVIYFGNNLISSCVRLGDLVYA 136
Query: 330 RWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVR 389
R VFD + + W AMI GY + +DEA LF + V N LL C R
Sbjct: 137 RKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSR 196
Query: 390 CKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTM 449
F +HG +VK G + V+++L+ Y++ G + + F M+ +D++SW +
Sbjct: 197 RAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAV 255
Query: 450 ITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXX 509
I+ C R + + M G + + PN T+ ++L C
Sbjct: 256 ISA---CSRKGHGIKAI-GMFIGMLNHW-------FLPNEFTVCSILKACSEEKALRFGR 304
Query: 510 EIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHG 569
++H+ +K+ + TD+ VG++L+DMYAKCG ++ R VFD M RN +TW +I A+ G
Sbjct: 305 QVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREG 364
Query: 570 KGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEP 629
GEEA+ LFR M + + N +T ++I AC G + G L H + IE
Sbjct: 365 FGEEAISLFRIM-----KRRHLIANNLTVVSILRACGSVGALLLGKEL-HAQIIKNSIEK 418
Query: 630 SSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGAC 674
+ + LV L + G +A+ +++ +PS + V +W++++ C
Sbjct: 419 NVYIGSTLVWLYCKCGESRDAFNVLQQLPS--RDVVSWTAMISGC 461
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 119/257 (46%), Gaps = 3/257 (1%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R+ W + A+ +AIS + M + +N ++L+A V L LGK++
Sbjct: 348 RNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKEL 407
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
H + K +V + ++LV +Y KCG+ A +V ++ RD VSW +MI+
Sbjct: 408 HAQIIK-NSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGH 466
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDW-RTFTNN 212
V+P FT S AC+N + L +G+ +H+ +N F +
Sbjct: 467 ESEALDFLKEMIQEGVEPNPFTYSSALKACAN-SESLLIGRSIHSIAKKNHALSNVFVGS 525
Query: 213 ALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRP 272
AL+ MYAK G + EA +F +K+LVSW +I ++N EAL +Y M G
Sbjct: 526 ALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEV 585
Query: 273 DGVTLASALPACSHLEM 289
D A+ L C +E+
Sbjct: 586 DDYIFATILSTCGDIEL 602
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 253 bits (646), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 146/413 (35%), Positives = 225/413 (54%), Gaps = 29/413 (7%)
Query: 336 ILRR----TVAVWNAMIAGYARNEFDDE---AIKLFIEMVY-ESDFT-PNSTTLSSLLPA 386
ILR+ +V ++N +I+ N + A L+ +++ S+F PN T SL A
Sbjct: 62 ILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKA 121
Query: 387 C-VRCKAFLDKEGIHGYVVK--RGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDI 443
+ +H +V+K D++VQ AL+ Y+ G++ ++S+F + D+
Sbjct: 122 SGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDL 181
Query: 444 VSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXX 503
+WNT++ Y D +L R Q ++PN ++L+ ++ C
Sbjct: 182 ATWNTLLAAYANSEEIDSDEEVLLLFMRMQ-----------VRPNELSLVALIKSCANLG 230
Query: 504 XXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIM 563
H Y LK L + VG++LID+Y+KCGCL+ +R VFD+M R+V +N +I
Sbjct: 231 EFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIR 290
Query: 564 AYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKA 623
+HG G+E +EL++ ++++ + P+ T++ +ACSHSG+VDEGL +F++MKA
Sbjct: 291 GLAVHGFGQEGIELYKSLISQG-----LVPDSATFVVTISACSHSGLVDEGLQIFNSMKA 345
Query: 624 NHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVG 683
+GIEP +HY CLVDLLGRSGR+EEA + IK MP W S LG+ + H + E G
Sbjct: 346 VYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVK-PNATLWRSFLGSSQTHGDFERG 404
Query: 684 EIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCS 736
EIA K LL LE + +YVLLSNIY+ W R+ MK+ V K PG S
Sbjct: 405 EIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 141/280 (50%), Gaps = 18/280 (6%)
Query: 169 VDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFR-----NGDWRTFTNNALVTMYAKLGR 223
V P FT S+ A G+ +HA+ + N D F ALV YA G+
Sbjct: 108 VRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHD--RFVQAALVGFYANCGK 165
Query: 224 IDEAKALFGLFDDKDLVSWNTVISSLSQNDRF--EEALLFLYHMLQSGVRPDGVTLASAL 281
+ EA++LF + DL +WNT++++ + ++ +E +L L+ +Q VRP+ ++L + +
Sbjct: 166 LREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ--VRPNELSLVALI 223
Query: 282 PACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTV 341
+C++L G H Y L+N +L N FVG++L+D+Y C R VFD + +R V
Sbjct: 224 KSCANLGEFVRGVWAHVYVLKN-NLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDV 282
Query: 342 AVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHG 401
+ +NAMI G A + F E I+L+ ++ + P+S T + AC + L EG+
Sbjct: 283 SCYNAMIRGLAVHGFGQEGIELYKSLISQG-LVPDSATFVVTISAC--SHSGLVDEGLQI 339
Query: 402 YVVKR---GFEKDKYVQNALMDMYSRMGRIEISKSIFGSM 438
+ + G E L+D+ R GR+E ++ M
Sbjct: 340 FNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKM 379
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 8/246 (3%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNL-GKQIHGHVFKF-GYASTSVAVAN 111
Q +S+ +N V P+ F +P++ KA+ + G+ +H HV KF + V
Sbjct: 99 QILSSRSNFVR----PNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQA 154
Query: 112 SLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDP 171
+LV Y CG L A +F+RI + D +WN+++AA V P
Sbjct: 155 ALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRP 214
Query: 172 TSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKAL 230
+LV++ +C+NL + + G H Y +N F +L+ +Y+K G + A+ +
Sbjct: 215 NELSLVALIKSCANLGEFVR-GVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKV 273
Query: 231 FGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEML 290
F +D+ +N +I L+ + +E + ++ G+ PD T + ACSH ++
Sbjct: 274 FDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLV 333
Query: 291 RTGKEI 296
G +I
Sbjct: 334 DEGLQI 339
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 161/360 (44%), Gaps = 26/360 (7%)
Query: 374 TPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKS 433
+P+++ L +CK+ + + IH ++ G Y + L+ + S + + + S
Sbjct: 3 SPSTSKNHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALS 61
Query: 434 IFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLM 493
I + + +NT+I+ +V + +L + D+ S ++PN T
Sbjct: 62 ILRQIPNPSVFLYNTLISS-IVSNHNSTQTHLAFSLY----DQILSSRSNFVRPNEFTYP 116
Query: 494 TVLPGCXXXXX-XXXXXEIHAYALK--QKLATDIAVGSALIDMYAKCGCLNLSRIVFDQM 550
++ +HA+ LK + + D V +AL+ YA CG L +R +F+++
Sbjct: 117 SLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERI 176
Query: 551 PTRNVITWNVLIMAYGMHGK---GEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSH 607
++ TWN L+ AY + EE L LF RM ++RPNE++ +A+ +C++
Sbjct: 177 REPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM--------QVRPNELSLVALIKSCAN 228
Query: 608 SGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAW 667
G G+ H + + + L+DL + G + A K+ M + + V +
Sbjct: 229 LGEFVRGV-WAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEM--SQRDVSCY 285
Query: 668 SSLLGACKIHQNLEVGEIAAKQLLV--LEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMK 725
++++ +H + G K L+ L P+ A+ V +S S +GL D+ + I MK
Sbjct: 286 NAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISAC-SHSGLVDEGLQIFNSMK 344
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 7/204 (3%)
Query: 67 VPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGA 126
V P+ + A++K+ A + + G H +V K + + V SL+++Y KCG L+ A
Sbjct: 212 VRPNELSLVALIKSCANLGEFVRGVWAHVYVLK-NNLTLNQFVGTSLIDLYSKCGCLSFA 270
Query: 127 HHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSN- 185
VFD +S RD +N+MI + P S T V ACS+
Sbjct: 271 RKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHS 330
Query: 186 --LRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDK-DLVSW 242
+ +GL + + A + LV + + GR++EA+ K + W
Sbjct: 331 GLVDEGLQIFNSMKAVYGIEPKVEHY--GCLVDLLGRSGRLEEAEECIKKMPVKPNATLW 388
Query: 243 NTVISSLSQNDRFEEALLFLYHML 266
+ + S + FE + L H+L
Sbjct: 389 RSFLGSSQTHGDFERGEIALKHLL 412
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 253 bits (645), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 149/446 (33%), Positives = 240/446 (53%), Gaps = 28/446 (6%)
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYES--DFTPNSTTLSSLLPACVR 389
+FD I V++ MI +R+ ++ F+ MV E D P+ T L+ AC++
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK 128
Query: 390 CKAFLDKEGIHGYVVKRG-FEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNT 448
F + IH +VVK G F D +VQ ++ +Y + ++ +F + + D+V W+
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDV 188
Query: 449 MITGYVVCGRHDDALNLLHDMQ-RGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXX 507
++ GYV CG + L + +M +G L+P+ ++ T L C
Sbjct: 189 LMNGYVRCGLGSEGLEVFREMLVKG------------LEPDEFSVTTALTACAQVGALAQ 236
Query: 508 XXEIHAYALKQK-LATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYG 566
IH + K+ + +D+ VG+AL+DMYAKCGC+ + VF ++ RNV +W LI Y
Sbjct: 237 GKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYA 296
Query: 567 MHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHG 626
+G ++A+ R+ E I+P+ V + + AAC+H G ++EG ++ M+A +
Sbjct: 297 AYGYAKKAMTCLERLEREDG----IKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYE 352
Query: 627 IEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKV-DAWSSLLGACKIHQNLEVGEI 685
I P +HY+C+VDL+ R+GR+++A LI+ MP MK + W +LL C+ H+N+E+GE+
Sbjct: 353 ITPKHEHYSCIVDLMCRAGRLDDALNLIEKMP--MKPLASVWGALLNGCRTHKNVELGEL 410
Query: 686 AAKQLLVLEP-NVASH---YVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHR 741
A K LL LE NV V LSNIY S +A +R +++ GVRK PG S +E
Sbjct: 411 AVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVD 470
Query: 742 DEVHKFLAGDASHPQSKELHEYLENL 767
V KF++GD SHP ++H + L
Sbjct: 471 GNVTKFVSGDVSHPNLLQIHTVIHLL 496
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 154/315 (48%), Gaps = 20/315 (6%)
Query: 194 KQVHAYTFRNGDWR-TFTNNALVTMYAKLGRIDE----AKALFGLFDDKDLVSWNTVISS 248
K H+ +G R T+ + L+T + L +++ A ++F + + ++T+I
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRI 87
Query: 249 LSQNDRFEEALLFLYHML---QSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTD 305
S++ + L + M+ + + P +T + AC GK+IH + ++N
Sbjct: 88 CSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGV 147
Query: 306 LIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFI 365
+ +S V + ++ +Y K R VFD I + V W+ ++ GY R E +++F
Sbjct: 148 FLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFR 207
Query: 366 EMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGF-EKDKYVQNALMDMYSR 424
EM+ + P+ ++++ L AC + A + IH +V K+ + E D +V AL+DMY++
Sbjct: 208 EMLVKG-LEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAK 266
Query: 425 MGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIP 484
G IE + +F + RR++ SW +I GY G A+ L ++R ED
Sbjct: 267 CGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLER------EDG---- 316
Query: 485 LKPNSVTLMTVLPGC 499
+KP+SV L+ VL C
Sbjct: 317 IKPDSVVLLGVLAAC 331
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 146/316 (46%), Gaps = 20/316 (6%)
Query: 174 FTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRT--FTNNALVTMYAKLGRIDEAKALF 231
F +V+ AC S+GKQ+H + +NG + + ++ +Y + + +A+ +F
Sbjct: 121 FLIVACLKACF-----FSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVF 175
Query: 232 GLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLR 291
D+V W+ +++ + E L ML G+ PD ++ +AL AC+ + L
Sbjct: 176 DEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALA 235
Query: 292 TGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGY 351
GK IH + + + + + FVG+ALVDMY C + VF + RR V W A+I GY
Sbjct: 236 QGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGY 295
Query: 352 ARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLD--KEGIHGYVVKRGFE 409
A + +A+ + E P+S L +L AC FL+ + + +
Sbjct: 296 AAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAH-GGFLEEGRSMLENMEARYEIT 354
Query: 410 KDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVS-WNTMITGYVVCGRHDD------A 462
+ ++D+ R GR++ + ++ M + + S W ++ G C H + A
Sbjct: 355 PKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG---CRTHKNVELGELA 411
Query: 463 LNLLHDMQRGQDDEYE 478
+ L D+++G +E E
Sbjct: 412 VKNLLDLEKGNVEEEE 427
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 132/309 (42%), Gaps = 10/309 (3%)
Query: 67 VPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGA 126
+ P F ++ A ++GKQIH V K G + V ++ +Y + L A
Sbjct: 112 IAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDA 171
Query: 127 HHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNL 186
VFD I D V W+ ++ R ++P F++ + AC+ +
Sbjct: 172 RKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQV 231
Query: 187 RDGLSLGKQVHAYTFRNGDW---RTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWN 243
L+ GK +H + + W F ALV MYAK G I+ A +F +++ SW
Sbjct: 232 -GALAQGKWIHEFV-KKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWA 289
Query: 244 TVISSLSQNDRFEEALLFLYHM-LQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALR 302
+I + ++A+ L + + G++PD V L L AC+H L G+ +
Sbjct: 290 ALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEA 349
Query: 303 NTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVA-VWNAMIAG---YARNEFDD 358
++ S +VD+ C + D + + + + +A VW A++ G + E +
Sbjct: 350 RYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGE 409
Query: 359 EAIKLFIEM 367
A+K +++
Sbjct: 410 LAVKNLLDL 418
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 7/218 (3%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+ + + M+ G+ PD F+ L A A V L GK IH V K + + V V +L
Sbjct: 201 EGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTAL 260
Query: 114 VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXN-VDPT 172
V+MY KCG + A VF +++ R+ SW ++I + + + P
Sbjct: 261 VDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPD 320
Query: 173 SFTLVSIAHACSN---LRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKA 229
S L+ + AC++ L +G S+ + + A ++ +V + + GR+D+A
Sbjct: 321 SVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYS--CIVDLMCRAGRLDDALN 378
Query: 230 LFGLFDDKDLVS-WNTVISSLSQNDRFEEALLFLYHML 266
L K L S W +++ + E L + ++L
Sbjct: 379 LIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLL 416
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 251 bits (642), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 164/535 (30%), Positives = 267/535 (49%), Gaps = 41/535 (7%)
Query: 228 KALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHL 287
K + F+ D SW ++ LSQ+ +F+E + M SG+ P + S L AC +
Sbjct: 58 KRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKM 117
Query: 288 EMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAM 347
E + GK IH AL+N L +V + LV +Y + + FD I + WN++
Sbjct: 118 ENMVDGKPIHAQALKN-GLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSL 176
Query: 348 IAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLP------ACVRCKAFLDKEG--- 398
+ GY + DEA ++F + + E D + +SS AC A K
Sbjct: 177 LHGYLESGELDEARRVF-DKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASW 235
Query: 399 ---IHGYVVKRGF-----------EKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIV 444
I GYV R +K+ ++ Y+++G ++ ++ +F M ++D +
Sbjct: 236 NILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKL 295
Query: 445 SWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXX 504
++ MI Y G+ DAL L M + + Y ++P+ +TL +V+
Sbjct: 296 VYDAMIACYTQNGKPKDALKLFAQML--ERNSY-------IQPDEITLSSVVSANSQLGN 346
Query: 505 XXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMA 564
+ +Y + + D + ++LID+Y K G + +F + ++ ++++ +IM
Sbjct: 347 TSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMG 406
Query: 565 YGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKAN 624
G++G EA LF M+ K+I PN VT+ + +A SHSG+V EG F++MK +
Sbjct: 407 CGINGMATEANSLFTAMI-----EKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK-D 460
Query: 625 HGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGE 684
H +EPS+DHY +VD+LGR+GR+EEAY+LIK+MP W +LL A +H N+E GE
Sbjct: 461 HNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQ-PNAGVWGALLLASGLHNNVEFGE 519
Query: 685 IAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIE 739
IA + LE + + L+ IYSS G WD A +R +KE + K GCSW+E
Sbjct: 520 IACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 112/445 (25%), Positives = 193/445 (43%), Gaps = 66/445 (14%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W +R +Q F + + Y +M +G+PP + A +VL+A + ++ GK IH
Sbjct: 71 SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQA 130
Query: 98 FK-------------------FGY-----------ASTSVAVANSLVNMYGKCGDLAGAH 127
K GY A + NSL++ Y + G+L A
Sbjct: 131 LKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEAR 190
Query: 128 HVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLR 187
VFD+I ++D VSWN +I++ + + P S+ ++ + N R
Sbjct: 191 RVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKS--PASWNILIGGYV--NCR 246
Query: 188 DGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVI 246
+ A +NG W T +++ Y KLG + A+ LF L KD + ++ +I
Sbjct: 247 EMKLARTYFDAMPQKNGVSWIT-----MISGYTKLGDVQSAEELFRLMSKKDKLVYDAMI 301
Query: 247 SSLSQNDRFEEALLFLYHMLQ--SGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNT 304
+ +QN + ++AL ML+ S ++PD +TL+S + A S L G + Y +
Sbjct: 302 ACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHG 361
Query: 305 DLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLF 364
ID+ + ++L+D+Y K +F + ++ ++AMI G N EA LF
Sbjct: 362 IKIDD-LLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLF 420
Query: 365 IEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFE-----KDKYVQNA-- 417
M+ E PN T + LL A H +V+ G++ KD ++ +
Sbjct: 421 TAMI-EKKIPPNVVTFTGLLSAYS-----------HSGLVQEGYKCFNSMKDHNLEPSAD 468
Query: 418 ----LMDMYSRMGRIEISKSIFGSM 438
++DM R GR+E + + SM
Sbjct: 469 HYGIMVDMLGRAGRLEEAYELIKSM 493
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 178/439 (40%), Gaps = 57/439 (12%)
Query: 169 VDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG------------------------ 204
+ P+S + S+ AC + + + GK +HA +NG
Sbjct: 100 IPPSSHAVTSVLRACGKMENMVD-GKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELA 158
Query: 205 --------DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFE 256
+ T + N+L+ Y + G +DEA+ +F +KD VSWN +ISS ++
Sbjct: 159 KKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMG 218
Query: 257 EAL-LFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSA 315
A LF L+S + L C +++ RT + N
Sbjct: 219 NACSLFSAMPLKSPASWN--ILIGGYVNCREMKLART--------YFDAMPQKNGVSWIT 268
Query: 316 LVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDF-T 374
++ Y +F + ++ V++AMIA Y +N +A+KLF +M+ + +
Sbjct: 269 MISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQ 328
Query: 375 PNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSI 434
P+ TLSS++ A + + Y+ + G + D + +L+D+Y + G + +
Sbjct: 329 PDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKM 388
Query: 435 FGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMT 494
F +++++D VS++ MI G + G +A +L M ++ IP PN VT
Sbjct: 389 FSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMI---------EKKIP--PNVVTFTG 437
Query: 495 VLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR- 553
+L + L ++DM + G L + + MP +
Sbjct: 438 LLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQP 497
Query: 554 NVITWNVLIMAYGMHGKGE 572
N W L++A G+H E
Sbjct: 498 NAGVWGALLLASGLHNNVE 516
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 194/707 (27%), Positives = 325/707 (45%), Gaps = 92/707 (13%)
Query: 121 GDLAGAHHVFDRISDRDHVS----WNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTL 176
G L A H+ D+I R ++ W S+++ + N+ + L
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 177 VSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDD 236
C + + +L FR + ++T GR ++A LF +
Sbjct: 116 TGYVK-CRRMNEAWTL--------FREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPE 166
Query: 237 KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEI 296
+++VSWNT+++ L +N E+A + + D V+ + + + + K +
Sbjct: 167 RNVVSWNTLVTGLIRNGDMEKA----KQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLL 222
Query: 297 HGYALRNTDLIDNSFVG-SALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNE 355
G D+ + + V +++V YC + +F + R + W AMI+G+A NE
Sbjct: 223 FG------DMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNE 276
Query: 356 FDDEAIKLFIEMVYESD-FTPNSTTLSSLLPACVRCKAFLDK--EGIHGYVVKRGFEK-- 410
EA+ LF+EM + D +PN TL SL AC + E +H V+ G+E
Sbjct: 277 LYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVD 336
Query: 411 -DKYVQNALMDMYSRMGRIEISKSIF-------------------GSMDR---------- 440
D + +L+ MY+ G I ++S+ G ++R
Sbjct: 337 HDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKS 396
Query: 441 -RDIVSWNTMITGYVVCGRHDDALNL---LHD--------MQRG--QDDEYEDDESI--- 483
D VSW +MI GY+ G A L LHD M G Q++ + + S+
Sbjct: 397 LHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSD 456
Query: 484 ----PLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLA--TDIAVGSALIDMYAKC 537
LKP + T +L IH K D+ + ++L+ MYAKC
Sbjct: 457 MVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKC 516
Query: 538 GCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVT 597
G + + +F +M ++ ++WN +IM HG ++AL LF+ M+ DS K +PN VT
Sbjct: 517 GAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEML---DSGK--KPNSVT 571
Query: 598 YIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTM 657
++ + +ACSHSG++ GL LF MK + I+P DHY ++DLLGR+G+++EA + I +
Sbjct: 572 FLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISAL 631
Query: 658 PSNMKKVDAWSSLLGACKIH---QNLE-VGEIAAKQLLVLEPNVASHYVLLSNIYSSAGL 713
P + +LLG C ++ ++ E + E AA +LL L+P A +V L N+Y+ G
Sbjct: 632 PFTPDHT-VYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGR 690
Query: 714 WDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKEL 760
D ++RK+M GV+K PGCSW+ + FL+GD S ++ ++
Sbjct: 691 HDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQM 737
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 127/541 (23%), Positives = 208/541 (38%), Gaps = 124/541 (22%)
Query: 106 SVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXX 165
+V N+LV + GD+ A VFD + RD VSWN+MI
Sbjct: 168 NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIE--------------- 212
Query: 166 XXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRID 225
DG+ K + + T ++V Y + G +
Sbjct: 213 ---------------------NDGMEEAKLLFGDM---SEKNVVTWTSMVYGYCRYGDVR 248
Query: 226 EAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQS--GVRPDGVTLASALPA 283
EA LF ++++VSW +IS + N+ + EAL+ M + V P+G TL S A
Sbjct: 249 EAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYA 308
Query: 284 CSHL--EMLRTGKE-----------------------IHGYA-----------------L 301
C L E R G++ +H YA L
Sbjct: 309 CGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDL 368
Query: 302 RNTDLIDNSFVG-----------------------SALVDMYCNCKKADKGRWVFDGILR 338
++ ++I N ++ ++++D Y + +F +
Sbjct: 369 QSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHD 428
Query: 339 RTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEG 398
+ W MI+G +NE EA L +MV P ++T S LL + +
Sbjct: 429 KDGVTWTVMISGLVQNELFAEAASLLSDMV-RCGLKPLNSTYSVLLSSAGATSNLDQGKH 487
Query: 399 IHGYVVKRG--FEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVC 456
IH + K ++ D +QN+L+ MY++ G IE + IF M ++D VSWN+MI G
Sbjct: 488 IHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHH 547
Query: 457 GRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYAL 516
G D ALNL +M KPNSVT + VL C E+ A+
Sbjct: 548 GLADKALNLFKEMLDSGK-----------KPNSVTFLGVLSACSHSGLITRGLELFK-AM 595
Query: 517 KQKLATDIAVGS--ALIDMYAKCGCLNLSRIVFDQMP-TRNVITWNVLIMAYGMHGKGEE 573
K+ + + ++ID+ + G L + +P T + + L+ G++ + ++
Sbjct: 596 KETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKD 655
Query: 574 A 574
A
Sbjct: 656 A 656
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 246 bits (629), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 148/479 (30%), Positives = 245/479 (51%), Gaps = 38/479 (7%)
Query: 294 KEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYAR 353
+E+ +A +T+ ++ F L M C VF ++ + V +W +MI GY
Sbjct: 16 RELITHAKCSTESLNQMF----LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLL 71
Query: 354 NEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPA--CVRCKAFLDKEGIHGYVVKRGFEKD 411
N+ D + + + ++ E D +T +S + + ++ D+ +D
Sbjct: 72 NK-DLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPC----------RD 120
Query: 412 KYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQR 471
N +++ Y+ +G +E + +F M R++ SWN +I GY GR + L M
Sbjct: 121 VMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV- 179
Query: 472 GQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLA---TDIAVGS 528
D+ S+ PN T+ VL C +H Y + L D+ V +
Sbjct: 180 -------DEGSVV--PNDATMTLVLSACAKLGAFDFGKWVHKYG--ETLGYNKVDVNVKN 228
Query: 529 ALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSN 588
ALIDMY KCG + ++ VF + R++I+WN +I HG G EAL LF M N
Sbjct: 229 ALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEM-----KN 283
Query: 589 KEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVE 648
I P++VT++ + AC H G+V++GL F++M + I P +H C+VDLL R+G +
Sbjct: 284 SGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLT 343
Query: 649 EAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIY 708
+A + I MP V W++LLGA K+++ +++GE+A ++L+ LEP +++V+LSNIY
Sbjct: 344 QAVEFINKMPVKADAV-IWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIY 402
Query: 709 SSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENL 767
AG +D A ++ M++ G +KE G SWIE D + KF + HP+++EL L L
Sbjct: 403 GDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 86/186 (46%), Gaps = 4/186 (2%)
Query: 111 NSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAA-ACRFXXXXXXXXXXXXXXXXNV 169
N+++ Y GD+ VFD + +R+ SWN +I A +V
Sbjct: 125 NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSV 184
Query: 170 DPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTN--NALVTMYAKLGRIDEA 227
P T+ + AC+ L GK VH Y G + N NAL+ MY K G I+ A
Sbjct: 185 VPNDATMTLVLSACAKL-GAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIA 243
Query: 228 KALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHL 287
+F +DL+SWNT+I+ L+ + EAL + M SG+ PD VT L AC H+
Sbjct: 244 MEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHM 303
Query: 288 EMLRTG 293
++ G
Sbjct: 304 GLVEDG 309
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 93/209 (44%), Gaps = 35/209 (16%)
Query: 212 NALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTV-------------------------- 245
N +++ Y ++G + EA++LF +D++SWNTV
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVF 153
Query: 246 -----ISSLSQNDRFEEALLFLYHMLQSG-VRPDGVTLASALPACSHLEMLRTGKEIHGY 299
I +QN R E L M+ G V P+ T+ L AC+ L GK +H Y
Sbjct: 154 SWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKY 213
Query: 300 A-LRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDD 358
+ +D + V +AL+DMY C + VF GI RR + WN MI G A +
Sbjct: 214 GETLGYNKVDVN-VKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGT 272
Query: 359 EAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
EA+ LF EM S +P+ T +L AC
Sbjct: 273 EALNLFHEM-KNSGISPDKVTFVGVLCAC 300
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 4/162 (2%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAG-VPPDNFAFPAVLKAAAGVNDLNLGKQ 92
R+ +W ++ AQ+ + + ++ MV G V P++ VL A A + + GK
Sbjct: 150 RNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKW 209
Query: 93 IHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFX 152
+H + GY V V N+L++MYGKCG + A VF I RD +SWN+MI
Sbjct: 210 VHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHG 269
Query: 153 XXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNL---RDGLS 191
+ P T V + AC ++ DGL+
Sbjct: 270 HGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLA 311
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 173/578 (29%), Positives = 281/578 (48%), Gaps = 57/578 (9%)
Query: 193 GKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQ 251
G+Q+HA+ +G ++ + LVT Y+ +DEA+ + + + WN +I S +
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 252 NDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSF 311
N RF+E++ M+ G+R D T S + AC+ L G+ +HG ++ + N +
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG-SIEVSSHRCNLY 220
Query: 312 VGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEM---- 367
V +AL+ MY K D R +FD + R WNA+I Y E EA KL M
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 368 VYESDFTPN------------------------------STTLSSLLPACVRCKAFLDKE 397
V S T N S + + L AC A +
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 398 GIHGYVVKR-GFEKD-KYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVV 455
H V++ F D V+N+L+ MYSR + + +F ++ + +WN++I+G+
Sbjct: 341 VFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAY 400
Query: 456 CGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYA 515
R ++ LL +M PN +TL ++LP E H Y
Sbjct: 401 NERSEETSFLLKEMLLSG-----------FHPNHITLASILPLFARVGNLQHGKEFHCYI 449
Query: 516 LKQKLATD-IAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEA 574
L+++ D + + ++L+DMYAK G + ++ VFD M R+ +T+ LI YG GKGE A
Sbjct: 450 LRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVA 509
Query: 575 LELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHY 634
L F+ M I+P+ VT +A+ +ACSHS +V EG LF M+ GI +HY
Sbjct: 510 LAWFKDM-----DRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHY 564
Query: 635 ACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLV-L 693
+C+VDL R+G +++A + T+P ++LL AC IH N +GE AA +LL+
Sbjct: 565 SCMVDLYCRAGYLDKARDIFHTIPYEPSSAMC-ATLLKACLIHGNTNIGEWAADKLLLET 623
Query: 694 EPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRK 731
+P HY+LL+++Y+ G W + + ++ + ++GV+K
Sbjct: 624 KPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 190 bits (482), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 141/525 (26%), Positives = 230/525 (43%), Gaps = 65/525 (12%)
Query: 72 FAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFD 131
++ ++L G N+ G+Q+H H G SV V LV Y L A + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK-LVTFYSAFNLLDEAQTITE 142
Query: 132 RISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLS 191
+ WN +I + R + FT S+ AC+ L D +
Sbjct: 143 NSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLD-FA 201
Query: 192 LGKQVH-AYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLS 250
G+ VH + + + NAL++MY + G++D A+ LF ++D VSWN +I+ +
Sbjct: 202 YGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 251 QNDRFEEALLFLYHMLQSG-----------------------------------VRPDGV 275
++ EA L M SG VR V
Sbjct: 262 SEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSV 321
Query: 276 TLASALPACSHLEMLRTGKEIHGYALRNTDL---IDNSFVGSALVDMYCNCKKADKGRWV 332
+ + L ACSH+ L+ GK H +R+ IDN V ++L+ MY C V
Sbjct: 322 AMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN--VRNSLITMYSRCSDLRHAFIV 379
Query: 333 FDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKA 392
F + +++ WN++I+G+A NE +E L EM+ S F PN TL+S+LP R
Sbjct: 380 FQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLL-SGFHPNHITLASILPLFARVGN 438
Query: 393 FLDKEGIHGYVVKRGFEKDKYV-QNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMIT 451
+ H Y+++R KD + N+L+DMY++ G I +K +F SM +RD V++ ++I
Sbjct: 439 LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLID 498
Query: 452 GYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEI 511
GY G+ + AL DM R +KP+ VT++ VL C +
Sbjct: 499 GYGRLGKGEVALAWFKDMDRSG-----------IKPDHVTMVAVLSACSHSNLVREGHWL 547
Query: 512 -----HAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMP 551
H + ++ +L S ++D+Y + G L+ +R +F +P
Sbjct: 548 FTKMEHVFGIRLRLEH----YSCMVDLYCRAGYLDKARDIFHTIP 588
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 203/445 (45%), Gaps = 48/445 (10%)
Query: 36 PSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHG 95
P W + ++ F +++S Y M++ G+ D F +P+V+KA A + D G+ +HG
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 96 HVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXX 155
+ + ++ V N+L++MY + G + A +FDR+S+RD VSWN++I
Sbjct: 209 SI-EVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLG 267
Query: 156 XXXXXXXXXXXXNVDPTSFTLVSIAHAC------------------SNLRDG-------- 189
V+ + T +IA C N+R G
Sbjct: 268 EAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGL 327
Query: 190 --------LSLGKQVHAYTFRNGDWR---TFTNNALVTMYAKLGRIDEAKALFGLFDDKD 238
L GK H R+ + N+L+TMY++ + A +F +
Sbjct: 328 KACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANS 387
Query: 239 LVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHG 298
L +WN++IS + N+R EE L ML SG P+ +TLAS LP + + L+ GKE H
Sbjct: 388 LSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHC 447
Query: 299 YALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDD 358
Y LR D + ++LVDMY + + VFD + +R + ++I GY R +
Sbjct: 448 YILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGE 507
Query: 359 EAIKLFIEMVYESDFTPNSTTLSSLLPAC-----VRCKAFLDKEGIHGYVVKRGFEKDKY 413
A+ F +M S P+ T+ ++L AC VR +L + H + ++ E
Sbjct: 508 VALAWFKDMD-RSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH--- 563
Query: 414 VQNALMDMYSRMGRIEISKSIFGSM 438
+ ++D+Y R G ++ ++ IF ++
Sbjct: 564 -YSCMVDLYCRAGYLDKARDIFHTI 587
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 129/552 (23%), Positives = 212/552 (38%), Gaps = 75/552 (13%)
Query: 235 DDKDL--VSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGV-TLASALPACSHLEMLR 291
DD+ + V +N+ +S +E F QSG + + AS L C
Sbjct: 41 DDESVPQVLFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFV 100
Query: 292 TGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGY 351
G+++H + + + D+ V LV Y D+ + + + WN +I Y
Sbjct: 101 PGQQLHAHCISSGLEFDSVLV-PKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSY 159
Query: 352 ARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKD 411
RN+ E++ ++ M+ + T S++ AC F +HG + +
Sbjct: 160 IRNKRFQESVSVYKRMM-SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCN 218
Query: 412 KYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQ- 470
YV NAL+ MY R G++++++ +F M RD VSWN +I Y + +A LL M
Sbjct: 219 LYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYL 278
Query: 471 RGQDDEYEDDESIP-----------------------LKPNSVTLMTVLPGCXXXXXXXX 507
G + +I ++ SV ++ L C
Sbjct: 279 SGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKW 338
Query: 508 XXEIHAYALKQ-KLATDI-AVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAY 565
H ++ + DI V ++LI MY++C L + IVF Q+ ++ TWN +I +
Sbjct: 339 GKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGF 398
Query: 566 GMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHT----- 620
+ + EE L + M+ PN +T +I + G + G FH
Sbjct: 399 AYNERSEETSFLLKEMLLSG-----FHPNHITLASILPLFARVGNLQHGKE-FHCYILRR 452
Query: 621 ---------------MKANHGIEPSSDH------------YACLVDLLGRSGRVEEAYKL 653
M A G ++ Y L+D GR G+ E A
Sbjct: 453 QSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAW 512
Query: 654 IKTMPSNMKKVD--AWSSLLGACKIHQNL--EVGEIAAKQLLVLEPNV-ASHYVLLSNIY 708
K M + K D ++L AC H NL E + K V + HY + ++Y
Sbjct: 513 FKDMDRSGIKPDHVTMVAVLSACS-HSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLY 571
Query: 709 SSAGLWDQAMDI 720
AG D+A DI
Sbjct: 572 CRAGYLDKARDI 583
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 173/578 (29%), Positives = 281/578 (48%), Gaps = 57/578 (9%)
Query: 193 GKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQ 251
G+Q+HA+ +G ++ + LVT Y+ +DEA+ + + + WN +I S +
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 252 NDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSF 311
N RF+E++ M+ G+R D T S + AC+ L G+ +HG ++ + N +
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG-SIEVSSHRCNLY 220
Query: 312 VGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEM---- 367
V +AL+ MY K D R +FD + R WNA+I Y E EA KL M
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 368 VYESDFTPN------------------------------STTLSSLLPACVRCKAFLDKE 397
V S T N S + + L AC A +
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 398 GIHGYVVKR-GFEKD-KYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVV 455
H V++ F D V+N+L+ MYSR + + +F ++ + +WN++I+G+
Sbjct: 341 VFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAY 400
Query: 456 CGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYA 515
R ++ LL +M PN +TL ++LP E H Y
Sbjct: 401 NERSEETSFLLKEMLLSG-----------FHPNHITLASILPLFARVGNLQHGKEFHCYI 449
Query: 516 LKQKLATD-IAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEA 574
L+++ D + + ++L+DMYAK G + ++ VFD M R+ +T+ LI YG GKGE A
Sbjct: 450 LRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVA 509
Query: 575 LELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHY 634
L F+ M I+P+ VT +A+ +ACSHS +V EG LF M+ GI +HY
Sbjct: 510 LAWFKDM-----DRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHY 564
Query: 635 ACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLV-L 693
+C+VDL R+G +++A + T+P ++LL AC IH N +GE AA +LL+
Sbjct: 565 SCMVDLYCRAGYLDKARDIFHTIPYEPSSAMC-ATLLKACLIHGNTNIGEWAADKLLLET 623
Query: 694 EPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRK 731
+P HY+LL+++Y+ G W + + ++ + ++GV+K
Sbjct: 624 KPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 190 bits (482), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 141/525 (26%), Positives = 230/525 (43%), Gaps = 65/525 (12%)
Query: 72 FAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFD 131
++ ++L G N+ G+Q+H H G SV V LV Y L A + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK-LVTFYSAFNLLDEAQTITE 142
Query: 132 RISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLS 191
+ WN +I + R + FT S+ AC+ L D +
Sbjct: 143 NSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLD-FA 201
Query: 192 LGKQVH-AYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLS 250
G+ VH + + + NAL++MY + G++D A+ LF ++D VSWN +I+ +
Sbjct: 202 YGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 251 QNDRFEEALLFLYHMLQSG-----------------------------------VRPDGV 275
++ EA L M SG VR V
Sbjct: 262 SEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSV 321
Query: 276 TLASALPACSHLEMLRTGKEIHGYALRNTDL---IDNSFVGSALVDMYCNCKKADKGRWV 332
+ + L ACSH+ L+ GK H +R+ IDN V ++L+ MY C V
Sbjct: 322 AMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN--VRNSLITMYSRCSDLRHAFIV 379
Query: 333 FDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKA 392
F + +++ WN++I+G+A NE +E L EM+ S F PN TL+S+LP R
Sbjct: 380 FQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLL-SGFHPNHITLASILPLFARVGN 438
Query: 393 FLDKEGIHGYVVKRGFEKDKYV-QNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMIT 451
+ H Y+++R KD + N+L+DMY++ G I +K +F SM +RD V++ ++I
Sbjct: 439 LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLID 498
Query: 452 GYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEI 511
GY G+ + AL DM R +KP+ VT++ VL C +
Sbjct: 499 GYGRLGKGEVALAWFKDMDRSG-----------IKPDHVTMVAVLSACSHSNLVREGHWL 547
Query: 512 -----HAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMP 551
H + ++ +L S ++D+Y + G L+ +R +F +P
Sbjct: 548 FTKMEHVFGIRLRLEH----YSCMVDLYCRAGYLDKARDIFHTIP 588
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 203/445 (45%), Gaps = 48/445 (10%)
Query: 36 PSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHG 95
P W + ++ F +++S Y M++ G+ D F +P+V+KA A + D G+ +HG
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 96 HVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXX 155
+ + ++ V N+L++MY + G + A +FDR+S+RD VSWN++I
Sbjct: 209 SI-EVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLG 267
Query: 156 XXXXXXXXXXXXNVDPTSFTLVSIAHAC------------------SNLRDG-------- 189
V+ + T +IA C N+R G
Sbjct: 268 EAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGL 327
Query: 190 --------LSLGKQVHAYTFRNGDWR---TFTNNALVTMYAKLGRIDEAKALFGLFDDKD 238
L GK H R+ + N+L+TMY++ + A +F +
Sbjct: 328 KACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANS 387
Query: 239 LVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHG 298
L +WN++IS + N+R EE L ML SG P+ +TLAS LP + + L+ GKE H
Sbjct: 388 LSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHC 447
Query: 299 YALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDD 358
Y LR D + ++LVDMY + + VFD + +R + ++I GY R +
Sbjct: 448 YILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGE 507
Query: 359 EAIKLFIEMVYESDFTPNSTTLSSLLPAC-----VRCKAFLDKEGIHGYVVKRGFEKDKY 413
A+ F +M S P+ T+ ++L AC VR +L + H + ++ E
Sbjct: 508 VALAWFKDMD-RSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH--- 563
Query: 414 VQNALMDMYSRMGRIEISKSIFGSM 438
+ ++D+Y R G ++ ++ IF ++
Sbjct: 564 -YSCMVDLYCRAGYLDKARDIFHTI 587
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 129/552 (23%), Positives = 212/552 (38%), Gaps = 75/552 (13%)
Query: 235 DDKDL--VSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGV-TLASALPACSHLEMLR 291
DD+ + V +N+ +S +E F QSG + + AS L C
Sbjct: 41 DDESVPQVLFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFV 100
Query: 292 TGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGY 351
G+++H + + + D+ V LV Y D+ + + + WN +I Y
Sbjct: 101 PGQQLHAHCISSGLEFDSVLV-PKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSY 159
Query: 352 ARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKD 411
RN+ E++ ++ M+ + T S++ AC F +HG + +
Sbjct: 160 IRNKRFQESVSVYKRMM-SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCN 218
Query: 412 KYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQ- 470
YV NAL+ MY R G++++++ +F M RD VSWN +I Y + +A LL M
Sbjct: 219 LYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYL 278
Query: 471 RGQDDEYEDDESIP-----------------------LKPNSVTLMTVLPGCXXXXXXXX 507
G + +I ++ SV ++ L C
Sbjct: 279 SGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKW 338
Query: 508 XXEIHAYALKQ-KLATDI-AVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAY 565
H ++ + DI V ++LI MY++C L + IVF Q+ ++ TWN +I +
Sbjct: 339 GKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGF 398
Query: 566 GMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHT----- 620
+ + EE L + M+ PN +T +I + G + G FH
Sbjct: 399 AYNERSEETSFLLKEMLLSG-----FHPNHITLASILPLFARVGNLQHGKE-FHCYILRR 452
Query: 621 ---------------MKANHGIEPSSDH------------YACLVDLLGRSGRVEEAYKL 653
M A G ++ Y L+D GR G+ E A
Sbjct: 453 QSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAW 512
Query: 654 IKTMPSNMKKVD--AWSSLLGACKIHQNL--EVGEIAAKQLLVLEPNV-ASHYVLLSNIY 708
K M + K D ++L AC H NL E + K V + HY + ++Y
Sbjct: 513 FKDMDRSGIKPDHVTMVAVLSACS-HSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLY 571
Query: 709 SSAGLWDQAMDI 720
AG D+A DI
Sbjct: 572 CRAGYLDKARDI 583
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 243 bits (621), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 148/460 (32%), Positives = 246/460 (53%), Gaps = 36/460 (7%)
Query: 277 LASALPACSHLEMLRTGKEIH----GYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWV 332
AS L C L + G +H Y LRN N + S LV +Y +C A+ V
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRN-----NLGISSKLVRLYASCGYAEVAHEV 149
Query: 333 FDGILRRTVA--VWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRC 390
FD + +R + WN++I+GYA ++A+ L+ +M E P+ T +L AC
Sbjct: 150 FDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMA-EDGVKPDRFTFPRVLKACGGI 208
Query: 391 KAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMI 450
+ E IH +VK GF D YV NAL+ MY++ G I ++++F + +D VSWN+M+
Sbjct: 209 GSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSML 268
Query: 451 TGYVVCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXX 509
TGY+ G +AL++ M Q G ++P+ V + +VL
Sbjct: 269 TGYLHHGLLHEALDIFRLMVQNG------------IEPDKVAISSVL---ARVLSFKHGR 313
Query: 510 EIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHG 569
++H + +++ + +++V +ALI +Y+K G L + +FDQM R+ ++WN +I A H
Sbjct: 314 QLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HS 370
Query: 570 KGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEP 629
K L+ F +M +P+ +T++++ + C+++GMV++G LF M +GI+P
Sbjct: 371 KNSNGLKYFEQM-----HRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDP 425
Query: 630 SSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQ 689
+HYAC+V+L GR+G +EEAY +I W +LL AC +H N ++GE+AA++
Sbjct: 426 KMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQR 485
Query: 690 LLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGV 729
L LEP+ ++ LL IYS A + +R+ M + G+
Sbjct: 486 LFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 173/381 (45%), Gaps = 19/381 (4%)
Query: 35 SPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIH 94
SP AW + A+ + A++ Y M GV PD F FP VLKA G+ + +G+ IH
Sbjct: 159 SPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIH 218
Query: 95 GHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXX 154
+ K G+ V V N+LV MY KCGD+ A +VFD I +D+VSWNSM+
Sbjct: 219 RDLVKEGFG-YDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLL 277
Query: 155 XXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNA 213
++P + S+ + + G+Q+H + R G +W NA
Sbjct: 278 HEALDIFRLMVQNGIEPDKVAISSVLARVLSFKH----GRQLHGWVIRRGMEWELSVANA 333
Query: 214 LVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPD 273
L+ +Y+K G++ +A +F ++D VSWN +IS+ S+N L + M ++ +PD
Sbjct: 334 LIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNS---NGLKYFEQMHRANAKPD 390
Query: 274 GVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKG--RW 331
G+T S L C++ M+ G+ + + + + +V++Y ++
Sbjct: 391 GITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMI 450
Query: 332 VFDGILRRTVAVWNAMIAG---YARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACV 388
V + L VW A++ + + + A + E+ E D N L+
Sbjct: 451 VQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFEL--EPD---NEHNFELLIRIYS 505
Query: 389 RCKAFLDKEGIHGYVVKRGFE 409
+ K D E + +V RG E
Sbjct: 506 KAKRAEDVERVRQMMVDRGLE 526
Score = 146 bits (368), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 186/389 (47%), Gaps = 16/389 (4%)
Query: 51 SFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVA 110
S + + T A + P+ FA ++L+ + ++ G ++H H+ ++ ++
Sbjct: 74 SVITDLETSAQKGISLTEPEIFA--SLLETCYSLRAIDHGVRVH-HLIPPYLLRNNLGIS 130
Query: 111 NSLVNMYGKCGDLAGAHHVFDRISDRDH--VSWNSMIAAACRFXXXXXXXXXXXXXXXXN 168
+ LV +Y CG AH VFDR+S RD +WNS+I+
Sbjct: 131 SKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG 190
Query: 169 VDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEA 227
V P FT + AC + + +G+ +H + G + + NALV MYAK G I +A
Sbjct: 191 VKPDRFTFPRVLKACGGI-GSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKA 249
Query: 228 KALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHL 287
+ +F + KD VSWN++++ + EAL M+Q+G+ PD V ++S L + +
Sbjct: 250 RNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARV 306
Query: 288 EMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAM 347
+ G+++HG+ +R + S V +AL+ +Y + + ++FD +L R WNA+
Sbjct: 307 LSFKHGRQLHGWVIRRGMEWELS-VANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAI 365
Query: 348 IAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKR- 406
I+ +++N +K F E ++ ++ P+ T S+L C D E + + K
Sbjct: 366 ISAHSKN---SNGLKYF-EQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEY 421
Query: 407 GFEKDKYVQNALMDMYSRMGRIEISKSIF 435
G + ++++Y R G +E + S+
Sbjct: 422 GIDPKMEHYACMVNLYGRAGMMEEAYSMI 450
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 242 bits (617), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 157/509 (30%), Positives = 263/509 (51%), Gaps = 73/509 (14%)
Query: 293 GKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYA 352
G+ +H + L + + + + + LV Y C K R VFD + +R ++ MI A
Sbjct: 35 GRVLHAH-LVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACA 93
Query: 353 RNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKE---GIHGYVVKRGFE 409
RN + E++ F EM Y+ ++ + SLL A + LD+E IH V+K +E
Sbjct: 94 RNGYYQESLDFFREM-YKDGLKLDAFIVPSLLKAS---RNLLDREFGKMIHCLVLKFSYE 149
Query: 410 KDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIV------------------------- 444
D ++ ++L+DMYS+ G + ++ +F + +D+V
Sbjct: 150 SDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDM 209
Query: 445 ----------SWNTMITGY--------------VVC--GRHDDALN-------LLHDMQR 471
+WN +I+G+ ++C G D ++ L+H+ Q
Sbjct: 210 KLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQN 269
Query: 472 GQD-DEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSAL 530
+ D ++ + L PNS T++T+LP C EIH Y++ L V SAL
Sbjct: 270 EKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSAL 329
Query: 531 IDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKE 590
+DMY KCG ++ + I+F + P + +T+N +I Y HG ++A+ELF +M A +
Sbjct: 330 LDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGE---- 385
Query: 591 IRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEA 650
+ + +T+ AI ACSH+G+ D G NLF M+ + I P +HYAC+VDLLGR+G++ EA
Sbjct: 386 -KLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEA 444
Query: 651 YKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSS 710
Y++IK M + W +LL AC+ H N+E+ IAAK L LEP + + +LL+++Y++
Sbjct: 445 YEMIKAMRME-PDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYAN 503
Query: 711 AGLWDQAMDIRKKMKEMGVRKEPGCSWIE 739
AG W+ + ++K +K+ R+ G SW+E
Sbjct: 504 AGSWESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 208/488 (42%), Gaps = 49/488 (10%)
Query: 90 GKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAAC 149
G+ +H H+ G A + +A LV Y +CG + A VFD + RD MI A
Sbjct: 35 GRVLHAHLVTSGIARLT-RIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACA 93
Query: 150 RFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFR-NGDWRT 208
R + +F + S+ A NL D GK +H + + +
Sbjct: 94 RNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDR-EFGKMIHCLVLKFSYESDA 152
Query: 209 FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQS 268
F ++L+ MY+K G + A+ +F ++DLV +N +IS + N + +EAL + M
Sbjct: 153 FIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLL 212
Query: 269 GVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADK 328
G++PD +T + + SH+ RN + + S ++++ C
Sbjct: 213 GIKPDVITWNALISGFSHM--------------RNEEKV------SEILELMC------- 245
Query: 329 GRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACV 388
DG + V W ++I+G N +++A F +M+ + PNS T+ +LLPAC
Sbjct: 246 ----LDGY-KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLY-PNSATIITLLPACT 299
Query: 389 RCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNT 448
+ IHGY V G E +V++AL+DMY + G I + +F ++ V++N+
Sbjct: 300 TLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNS 359
Query: 449 MITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXX 508
MI Y G D A+ L M E+ K + +T +L C
Sbjct: 360 MIFCYANHGLADKAVELFDQM-----------EATGEKLDHLTFTAILTACSHAGLTDLG 408
Query: 509 XEIHAYAL-KQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR-NVITWNVLIMAYG 566
+ K ++ + + ++D+ + G L + + M ++ W L+ A
Sbjct: 409 QNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACR 468
Query: 567 MHGKGEEA 574
HG E A
Sbjct: 469 NHGNMELA 476
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 161/341 (47%), Gaps = 34/341 (9%)
Query: 47 AQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTS 106
A++ + +++ + M G+ D F P++LKA+ + D GK IH V KF Y S +
Sbjct: 93 ARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDA 152
Query: 107 VAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXX 166
V+ SL++MY K G++ A VF + ++D V +N+MI+
Sbjct: 153 FIVS-SLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKL 211
Query: 167 XNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDE 226
+ P T ++ S++R+ K+ I E
Sbjct: 212 LGIKPDVITWNALISGFSHMRNE-----------------------------EKVSEILE 242
Query: 227 AKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH 286
L G D+VSW ++IS L N + E+A ML G+ P+ T+ + LPAC+
Sbjct: 243 LMCLDGY--KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTT 300
Query: 287 LEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNA 346
L ++ GKEIHGY++ T L D+ FV SAL+DMY C + +F ++T +N+
Sbjct: 301 LAYMKHGKEIHGYSVV-TGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNS 359
Query: 347 MIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
MI YA + D+A++LF +M + + T +++L AC
Sbjct: 360 MIFCYANHGLADKAVELFDQMEATGE-KLDHLTFTAILTAC 399
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 155/345 (44%), Gaps = 22/345 (6%)
Query: 383 LLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRD 442
L+ A R + F +H ++V G + + L+ Y G++ ++ +F M +RD
Sbjct: 22 LIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRD 81
Query: 443 IVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXX 502
I MI G + ++L+ +M Y+D LK ++ + ++L
Sbjct: 82 ISGCVVMIGACARNGYYQESLDFFREM-------YKDG----LKLDAFIVPSLLKASRNL 130
Query: 503 XXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLI 562
IH LK +D + S+LIDMY+K G + +R VF + ++++ +N +I
Sbjct: 131 LDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMI 190
Query: 563 MAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMK 622
Y + + +EAL L + M I+P+ +T+ A+ + SH ++ + M
Sbjct: 191 SGYANNSQADEALNLVKDM-----KLLGIKPDVITWNALISGFSHMRNEEKVSEILELMC 245
Query: 623 ANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWS--SLLGACKIHQNL 680
+ G +P + ++ L + + E+A+ K M ++ ++ + +LL AC +
Sbjct: 246 LD-GYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYM 304
Query: 681 EVG-EIAAKQLLV-LEPNVASHYVLLSNIYSSAGLWDQAMDIRKK 723
+ G EI ++ LE + LL ++Y G +AM + +K
Sbjct: 305 KHGKEIHGYSVVTGLEDHGFVRSALL-DMYGKCGFISEAMILFRK 348
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 242 bits (617), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/348 (37%), Positives = 198/348 (56%), Gaps = 23/348 (6%)
Query: 523 DIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMV 582
D++ L++MY+ CG N + VF++M +N+ TW ++I + +G GE+A+++F R
Sbjct: 288 DLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK 347
Query: 583 AEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLG 642
E + P+ + IF AC G VDEGL F +M ++GI PS + Y LV++
Sbjct: 348 EEGNI-----PDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYA 402
Query: 643 RSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYV 702
G ++EA + ++ MP VD W +L+ ++H NLE+G+ A+ + L+P
Sbjct: 403 LPGFLDEALEFVERMPME-PNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRL---- 457
Query: 703 LLSNIYSSAGLWD-QAMDIRKKMKEMGVRKEPGCSWIEH--RDEVHKFLAGDASHPQSKE 759
N S G +A D+ K+ ++K G I H + + +F AGD + P++ E
Sbjct: 458 ---NKQSREGFIPVKASDVEKE----SLKKRSG---ILHGVKSSMQEFRAGDTNLPENDE 507
Query: 760 LHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIR 819
L + L NL M + GYV +T LHD+D E KET+L GHSER+A A +LN+ P
Sbjct: 508 LFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFT 567
Query: 820 VTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
V KNLRVC DCH A K +S IV RE+I RD++RFH +NG C+C DYW
Sbjct: 568 VIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/431 (30%), Positives = 228/431 (52%), Gaps = 27/431 (6%)
Query: 316 LVDMYCNCKKADKGRWVFDGILRRTVA-------VWNAMIAGYARNEFDDEAIKLFIEMV 368
L + NC + R + I R + +WN ++ Y R+E +AI++++ MV
Sbjct: 50 LATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMV 109
Query: 369 YESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI 428
S P+ +L ++ A V+ F + +H V+ GF D++ ++ + +Y + G
Sbjct: 110 -RSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEF 168
Query: 429 EISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPN 488
E ++ +F R + SWN +I G GR ++A+ + DM+R L+P+
Sbjct: 169 ENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSG-----------LEPD 217
Query: 489 SVTLMTVLPGCXXXXXXXXXXEIHAYALKQKL--ATDIAVGSALIDMYAKCGCLNLSRIV 546
T+++V C ++H L+ K +DI + ++LIDMY KCG ++L+ +
Sbjct: 218 DFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHI 277
Query: 547 FDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACS 606
F++M RNV++W+ +I+ Y +G EALE FR+M +RPN++T++ + +AC
Sbjct: 278 FEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQM-----REFGVRPNKITFVGVLSACV 332
Query: 607 HSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDA 666
H G+V+EG F MK+ +EP HY C+VDLL R G+++EA K+++ MP V
Sbjct: 333 HGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMK-PNVMV 391
Query: 667 WSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKE 726
W L+G C+ ++E+ E A ++ LEP YV+L+N+Y+ G+W +RK MK
Sbjct: 392 WGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKT 451
Query: 727 MGVRKEPGCSW 737
V K P S+
Sbjct: 452 KKVAKIPAYSY 462
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 143/318 (44%), Gaps = 10/318 (3%)
Query: 39 WIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVF 98
W + +R + S L AI Y MV + V PD ++ P V+KAA ++D LGK++H
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 99 KFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXX 158
+ G+ + + +Y K G+ A VFD +R SWN++I
Sbjct: 145 RLGFVGDEFC-ESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAV 203
Query: 159 XXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVH-----AYTFRNGDWRTFTNNA 213
++P FT+VS+ +C L D LSL Q+H A T D N+
Sbjct: 204 EMFVDMKRSGLEPDDFTMVSVTASCGGLGD-LSLAFQLHKCVLQAKTEEKSDIMML--NS 260
Query: 214 LVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPD 273
L+ MY K GR+D A +F +++VSW+++I + N EAL M + GVRP+
Sbjct: 261 LIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPN 320
Query: 274 GVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVF 333
+T L AC H ++ GK +L +VD+ + + + V
Sbjct: 321 KITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVV 380
Query: 334 DGI-LRRTVAVWNAMIAG 350
+ + ++ V VW ++ G
Sbjct: 381 EEMPMKPNVMVWGCLMGG 398
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 164/352 (46%), Gaps = 15/352 (4%)
Query: 113 LVNMYGKCGDLAGAHHVF-----DRISDRDHVS--WNSMIAAACRFXXXXXXXXXXXXXX 165
L + C LA + RI D+ ++ WN+++ + R
Sbjct: 50 LATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMV 109
Query: 166 XXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRI 224
V P ++L + A + D +LGK++H+ R G F + +T+Y K G
Sbjct: 110 RSTVLPDRYSLPIVIKAAVQIHD-FTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEF 168
Query: 225 DEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPAC 284
+ A+ +F ++ L SWN +I L+ R EA+ M +SG+ PD T+ S +C
Sbjct: 169 ENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASC 228
Query: 285 SHLEMLRTGKEIHGYALR-NTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAV 343
L L ++H L+ T+ + + ++L+DMY C + D +F+ + +R V
Sbjct: 229 GGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVS 288
Query: 344 WNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYV 403
W++MI GYA N EA++ F +M E PN T +L ACV +++ + +
Sbjct: 289 WSSMIVGYAANGNTLEALECFRQM-REFGVRPNKITFVGVLSACVH-GGLVEEGKTYFAM 346
Query: 404 VKRGFEKDKYVQN--ALMDMYSRMGRIEISKSIFGSMDRR-DIVSWNTMITG 452
+K FE + + + ++D+ SR G+++ +K + M + +++ W ++ G
Sbjct: 347 MKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGG 398
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 174/647 (26%), Positives = 303/647 (46%), Gaps = 55/647 (8%)
Query: 111 NSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD 170
N +N + G +A A +F+++ R+ V+WN+MI+ + +V
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDV- 102
Query: 171 PTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKAL 230
T T++S +C +R K R+ +F+ N +++ YAK RI EA L
Sbjct: 103 VTWNTMISGYVSCGGIRFLEEARKLFDEMPSRD----SFSWNTMISGYAKNRRIGEALLL 158
Query: 231 FGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEML 290
F +++ VSW+ +I+ QN + A++ M P L + + E L
Sbjct: 159 FEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLIKNERL 214
Query: 291 RTGKEIHG-YALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI------------- 336
+ G Y + D + + L+ Y + + R +FD I
Sbjct: 215 SEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFR 274
Query: 337 --LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFL 394
+ V WN+MI Y + D + +L + + + D + + ++++ V
Sbjct: 275 ERFCKNVVSWNSMIKAYLKVG-DVVSARLLFDQMKDRD----TISWNTMIDGYVHVSRME 329
Query: 395 DKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYV 454
D + + R D + N ++ Y+ +G +E+++ F + VSWN++I Y
Sbjct: 330 DAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYE 385
Query: 455 VCGRHDDALNLLHDMQ-RGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHA 513
+ +A++L M G+ KP+ TL ++L ++H
Sbjct: 386 KNKDYKEAVDLFIRMNIEGE------------KPDPHTLTSLLSASTGLVNLRLGMQMHQ 433
Query: 514 YALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMP-TRNVITWNVLIMAYGMHGKGE 572
+K + D+ V +ALI MY++CG + SR +FD+M R VITWN +I Y HG
Sbjct: 434 IVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNAS 492
Query: 573 EALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSD 632
EAL LF M + I P+ +T++++ AC+H+G+VDE F +M + + IEP +
Sbjct: 493 EALNLFGSM-----KSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQME 547
Query: 633 HYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLV 692
HY+ LV++ G+ EEA +I +MP K W +LL AC+I+ N+ + +AA+ +
Sbjct: 548 HYSSLVNVTSGQGQFEEAMYIITSMPFEPDKT-VWGALLDACRIYNNVGLAHVAAEAMSR 606
Query: 693 LEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIE 739
LEP ++ YVLL N+Y+ GLWD+A +R M+ ++KE G SW++
Sbjct: 607 LEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 103/253 (40%), Gaps = 46/253 (18%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W + ++ + +A+ + M G PD ++L A+ G+ +L LG Q+H V
Sbjct: 376 SWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIV 435
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRIS-DRDHVSWNSMIAAACRFXXXXX 156
K V V N+L+ MY +CG++ + +FD + R+ ++WN+MI
Sbjct: 436 VK--TVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASE 493
Query: 157 XXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVT 216
+ P+ T VS+ +AC+ HA
Sbjct: 494 ALNLFGSMKSNGIYPSHITFVSVLNACA------------HA------------------ 523
Query: 217 MYAKLGRIDEAKALF----GLFD-DKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVR 271
G +DEAKA F ++ + + ++++++ S +FEEA+ + M
Sbjct: 524 -----GLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSM---PFE 575
Query: 272 PDGVTLASALPAC 284
PD + L AC
Sbjct: 576 PDKTVWGALLDAC 588
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 237 bits (604), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/465 (31%), Positives = 236/465 (50%), Gaps = 28/465 (6%)
Query: 295 EIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARN 354
EIH + LR+ L ++ + + + + + +D VF I V V+NAMI Y+
Sbjct: 22 EIHAHLLRHF-LHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLV 80
Query: 355 EFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYV 414
E++ F M + + T + LL +C + +HG +++ GF + +
Sbjct: 81 GPPLESLSFFSSMKSRGIWA-DEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKI 139
Query: 415 QNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQD 474
+ ++++Y+ GR+ ++ +F M R++V WN MI G+ G + L+L M
Sbjct: 140 RIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSI 199
Query: 475 DEY-----------EDDESIPL---------KPNSVTLMTVLPGCXXXXXXXXXXEIHAY 514
+ D E++ L P+ T++TVLP IH+
Sbjct: 200 VSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHST 259
Query: 515 ALKQKLATD-IAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEE 573
A L D I VG+AL+D Y K G L + +F +M RNV++WN LI ++GKGE
Sbjct: 260 AESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEF 319
Query: 574 ALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDH 633
++LF M+ E ++ PNE T++ + A CS++G V+ G LF M +E ++H
Sbjct: 320 GIDLFDAMIEEG----KVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEH 375
Query: 634 YACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVL 693
Y +VDL+ RSGR+ EA+K +K MP N W SLL AC+ H ++++ E+AA +L+ +
Sbjct: 376 YGAMVDLMSRSGRITEAFKFLKNMPVNANAA-MWGSLLSACRSHGDVKLAEVAAMELVKI 434
Query: 694 EPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWI 738
EP + +YVLLSN+Y+ G W +R MK+ +RK G S I
Sbjct: 435 EPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 166/389 (42%), Gaps = 44/389 (11%)
Query: 214 LVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPD 273
+++ L D A +F + +++ +N +I S E+L F M G+ D
Sbjct: 42 FISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWAD 101
Query: 274 GVTLASALPACSHLEMLRTGKEIHGYALRN-------------------------TDLID 308
T A L +CS L LR GK +HG +R + D
Sbjct: 102 EYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFD 161
Query: 309 -----NSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKL 363
N V + ++ +C+ ++G +F + R++ WN+MI+ ++ D EA++L
Sbjct: 162 EMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALEL 221
Query: 364 FIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKY-VQNALMDMY 422
F EM+ + F P+ T+ ++LP + IH G KD V NAL+D Y
Sbjct: 222 FCEMI-DQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFY 280
Query: 423 SRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDES 482
+ G +E + +IF M RR++VSWNT+I+G V G+ + ++L M E
Sbjct: 281 CKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMI----------EE 330
Query: 483 IPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQ-KLATDIAVGSALIDMYAKCGCLN 541
+ PN T + VL C E+ +++ KL A++D+ ++ G +
Sbjct: 331 GKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRIT 390
Query: 542 LSRIVFDQMPTR-NVITWNVLIMAYGMHG 569
+ MP N W L+ A HG
Sbjct: 391 EAFKFLKNMPVNANAAMWGSLLSACRSHG 419
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 174/419 (41%), Gaps = 39/419 (9%)
Query: 77 VLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDR 136
+L+ G N +IH H+ + +++ +A+ +++ G + A+ VF I +
Sbjct: 7 LLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAH-FISICGSLSNSDYANRVFSHIQNP 65
Query: 137 DHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQV 196
+ + +N+MI + +T + +CS+L D L GK V
Sbjct: 66 NVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSD-LRFGKCV 124
Query: 197 HAYTFRNGDWRTF-TNNALVTMYAKLGRIDEAKALF----------------GLFDDKD- 238
H R G R +V +Y GR+ +A+ +F G D D
Sbjct: 125 HGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDV 184
Query: 239 --------------LVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPAC 284
+VSWN++ISSLS+ R EAL M+ G PD T+ + LP
Sbjct: 185 ERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPIS 244
Query: 285 SHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVW 344
+ L +L TGK IH A + D VG+ALVD YC + +F + RR V W
Sbjct: 245 ASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSW 304
Query: 345 NAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVV 404
N +I+G A N + I LF M+ E PN T +L C E + G ++
Sbjct: 305 NTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMM 364
Query: 405 KR-GFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD-RRDIVSWNTMITGYVVCGRHDD 461
+R E A++D+ SR GRI + +M + W ++++ C H D
Sbjct: 365 ERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSA---CRSHGD 420
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 152/331 (45%), Gaps = 35/331 (10%)
Query: 53 LQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGY---------- 102
L+++S +++M + G+ D + + +LK+ + ++DL GK +HG + + G+
Sbjct: 84 LESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGV 143
Query: 103 --------------------ASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWN 142
+ +V V N ++ + GD+ H+F ++S+R VSWN
Sbjct: 144 VELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWN 203
Query: 143 SMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFR 202
SMI++ + DP T+V++ ++L L GK +H+
Sbjct: 204 SMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASL-GVLDTGKWIHSTAES 262
Query: 203 NGDWRTF--TNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALL 260
+G ++ F NALV Y K G ++ A A+F +++VSWNT+IS + N + E +
Sbjct: 263 SGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGID 322
Query: 261 FLYHMLQSG-VRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDM 319
M++ G V P+ T L CS+ + G+E+ G + L + A+VD+
Sbjct: 323 LFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDL 382
Query: 320 YCNCKKADKG-RWVFDGILRRTVAVWNAMIA 349
+ + +++ + + A+W ++++
Sbjct: 383 MSRSGRITEAFKFLKNMPVNANAAMWGSLLS 413
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 5/219 (2%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
RS +W + ++ +A+ + M+ G PD VL +A + L+ GK I
Sbjct: 197 RSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWI 256
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIA-AACRFX 152
H G + V N+LV+ Y K GDL A +F ++ R+ VSWN++I+ +A
Sbjct: 257 HSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGK 316
Query: 153 XXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG--DWRTFT 210
V P T + + AC + + G+++ + RT
Sbjct: 317 GEFGIDLFDAMIEEGKVAPNEATFLGVL-ACCSYTGQVERGEELFGLMMERFKLEARTEH 375
Query: 211 NNALVTMYAKLGRIDEA-KALFGLFDDKDLVSWNTVISS 248
A+V + ++ GRI EA K L + + + W +++S+
Sbjct: 376 YGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSA 414
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 237 bits (604), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 143/465 (30%), Positives = 238/465 (51%), Gaps = 29/465 (6%)
Query: 276 TLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDG 335
T L ACS L TG+++H ++ + +AL+DMY VF+
Sbjct: 86 TFTPVLGACSLLSYPETGRQVHALMIKQ-GAETGTISKTALIDMYSKYGHLVDSVRVFES 144
Query: 336 ILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLD 395
+ + + WNA+++G+ RN EA+ +F M Y + TLSS++ C K
Sbjct: 145 VEEKDLVSWNALLSGFLRNGKGKEALGVFAAM-YRERVEISEFTLSSVVKTCASLKILQQ 203
Query: 396 KEGIHGYVVKRGFEKDKYV-QNALMDMYSRMGRIEISKSIFGSMD-RRDIVSWNTMITGY 453
+ +H VV G +D V A++ YS +G I + ++ S++ D V N++I+G
Sbjct: 204 GKQVHAMVVVTG--RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGC 261
Query: 454 VVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHA 513
+ + +A LL QR PN L + L GC +IH
Sbjct: 262 IRNRNYKEAF-LLMSRQR---------------PNVRVLSSSLAGCSDNSDLWIGKQIHC 305
Query: 514 YALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEE 573
AL+ +D + + L+DMY KCG + +R +F +P+++V++W +I AY ++G G +
Sbjct: 306 VALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVK 365
Query: 574 ALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDH 633
ALE+FR M E + PN VT++ + +AC+H+G+V EG F MK + + P ++H
Sbjct: 366 ALEIFREMCEEGSG---VLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEH 422
Query: 634 YACLVDLLGRSGRVEEAYKLIKTMPSNMKK---VDAWSSLLGACKIHQNLEVGEIAAKQL 690
Y C +D+L ++G EE ++L++ M N + W ++L AC ++ +L GE A++L
Sbjct: 423 YVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRL 482
Query: 691 L-VLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPG 734
+ P AS YVL+SN Y++ G WD ++R K+K G+ K G
Sbjct: 483 MEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAG 527
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 174/349 (49%), Gaps = 18/349 (5%)
Query: 69 PD--NFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGA 126
PD + F VL A + ++ G+Q+H + K G A T +L++MY K G L +
Sbjct: 80 PDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQG-AETGTISKTALIDMYSKYGHLVDS 138
Query: 127 HHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNL 186
VF+ + ++D VSWN++++ R V+ + FTL S+ C++L
Sbjct: 139 VRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASL 198
Query: 187 RDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFD-DKDLVSWNTV 245
+ L GKQVHA G A+++ Y+ +G I+EA ++ + D V N++
Sbjct: 199 KI-LQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSL 257
Query: 246 ISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTD 305
IS +N ++EA L L S RP+ L+S+L CS L GK+IH ALRN
Sbjct: 258 ISGCIRNRNYKEAFL-----LMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRN-G 311
Query: 306 LIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFI 365
+ +S + + L+DMY C + + R +F I ++V W +MI YA N +A+++F
Sbjct: 312 FVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFR 371
Query: 366 EMVYE-SDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKY 413
EM E S PNS T ++ AC A L KEG + G K+KY
Sbjct: 372 EMCEEGSGVLPNSVTFLVVISACAH--AGLVKEGKECF----GMMKEKY 414
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 181/377 (48%), Gaps = 22/377 (5%)
Query: 126 AHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSN 185
A H+FD + RD S NS +++ R + D +S T + ACS
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACS- 95
Query: 186 LRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNT 244
L G+QVHA + G + T + AL+ MY+K G + ++ +F ++KDLVSWN
Sbjct: 96 LLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNA 155
Query: 245 VISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHG-YALRN 303
++S +N + +EAL M + V TL+S + C+ L++L+ GK++H +
Sbjct: 156 LLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG 215
Query: 304 TDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAV-WNAMIAGYARNEFDDEAIK 362
DL+ +G+A++ Y + ++ V++ + T V N++I+G RN EA
Sbjct: 216 RDLV---VLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFL 272
Query: 363 LFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMY 422
L S PN LSS L C + IH ++ GF D + N LMDMY
Sbjct: 273 LM------SRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMY 326
Query: 423 SRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDES 482
+ G+I +++IF ++ + +VSW +MI Y V G AL + +M +E
Sbjct: 327 GKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMC---------EEG 377
Query: 483 IPLKPNSVTLMTVLPGC 499
+ PNSVT + V+ C
Sbjct: 378 SGVLPNSVTFLVVISAC 394
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 236 bits (601), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 151/509 (29%), Positives = 247/509 (48%), Gaps = 66/509 (12%)
Query: 275 VTLASALPACSHLEMLRTGKEI---HGYALRNTDLIDNSFVGSALVDMYCN---CKKADK 328
V ++ +P S E ++ EI H + L+ T L ++F S LV K
Sbjct: 34 VCSSTPVPILSFTERAKSLTEIQQAHAFMLK-TGLFHDTFSASKLVAFAATNPEPKTVSY 92
Query: 329 GRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACV 388
+ + I N++I YA + + A+ +F EM+ F P+ + + +L AC
Sbjct: 93 AHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVF-PDKYSFTFVLKACA 151
Query: 389 RCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNT 448
F + IHG +K G D +V+N L+++Y R G EI++ + M RD VSWN+
Sbjct: 152 AFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNS 211
Query: 449 MITGYVVCGRHDDALNLLHDMQRGQDDEY-----------------EDDESIPL------ 485
+++ Y+ G D+A L +M+ + + E +S+P+
Sbjct: 212 LLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSW 271
Query: 486 -----------------------------KPNSVTLMTVLPGCXXXXXXXXXXEIHAYAL 516
KP+ TL++VL C +H Y
Sbjct: 272 NAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYID 331
Query: 517 KQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALE 576
K + + + +AL+DMY+KCG ++ + VF R+V TWN +I +HG G++ALE
Sbjct: 332 KHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALE 391
Query: 577 LFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYAC 636
+F MV E +PN +T+I + +AC+H GM+D+ LF M + + +EP+ +HY C
Sbjct: 392 IFSEMVYEG-----FKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGC 446
Query: 637 LVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPN 696
+VDLLGR G++EEA +L+ +P++ + SLLGACK LE E A +LL L
Sbjct: 447 MVDLLGRMGKIEEAEELVNEIPADEASI-LLESLLGACKRFGQLEQAERIANRLLELNLR 505
Query: 697 VASHYVLLSNIYSSAGLWDQAMDIRKKMK 725
+S Y +SN+Y+S G W++ +D R+ M+
Sbjct: 506 DSSGYAQMSNLYASDGRWEKVIDGRRNMR 534
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 147/615 (23%), Positives = 244/615 (39%), Gaps = 111/615 (18%)
Query: 43 LRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGY 102
+R QA + LQ + V + P +F K+ + +Q H + K G
Sbjct: 14 IRPQAYNLRLLQKENLKKMSVCSSTPVPILSFTERAKSLTEI------QQAHAFMLKTGL 67
Query: 103 A----STSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXX 158
S S VA + N K ++ AH + +RI + + NS+I A
Sbjct: 68 FHDTFSASKLVAFAATNPEPKT--VSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVAL 125
Query: 159 XXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWR-TFTNNALVTM 217
V P ++ + AC+ G G+Q+H ++G F N LV +
Sbjct: 126 TVFREMLLGPVFPDKYSFTFVLKACAAF-CGFEEGRQIHGLFIKSGLVTDVFVENTLVNV 184
Query: 218 YAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTL 277
Y + G + A+ + +D VSWN+++S+ + +EA M + V
Sbjct: 185 YGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFM- 243
Query: 278 ASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGIL 337
I GYA + LV + + VFD +
Sbjct: 244 ------------------ISGYA------------AAGLVK---------EAKEVFDSMP 264
Query: 338 RRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKE 397
R V WNAM+ YA +E +++F +M+ +S P+ TL S+L AC + E
Sbjct: 265 VRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGE 324
Query: 398 GIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCG 457
+H Y+ K G E + ++ AL+DMYS+ G+I+ + +F + +RD+ +WN++I+ V G
Sbjct: 325 WVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHG 384
Query: 458 RHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALK 517
DAL + +M YE KPN +T + VL C H L
Sbjct: 385 LGKDALEIFSEMV------YEG-----FKPNGITFIGVLSACN-----------HVGMLD 422
Query: 518 QKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALEL 577
Q L +M + V+ PT + + ++ G GK EEA EL
Sbjct: 423 Q--------ARKLFEMMSS---------VYRVEPT--IEHYGCMVDLLGRMGKIEEAEEL 463
Query: 578 FRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPS---SDHY 634
+ A++ S + ++ AC G +++ + AN +E + S Y
Sbjct: 464 VNEIPADEAS--------ILLESLLGACKRFGQLEQAERI-----ANRLLELNLRDSSGY 510
Query: 635 ACLVDLLGRSGRVEE 649
A + +L GR E+
Sbjct: 511 AQMSNLYASDGRWEK 525
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 235 bits (599), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 150/628 (23%), Positives = 295/628 (46%), Gaps = 89/628 (14%)
Query: 208 TFTNNALVTMYAKLGRIDEAKALFGLFD-DKDLVSWNTVISSLSQNDRFEEALLFLYHML 266
++ NA++ Y K + EA+ LF + ++DL+++NT++S ++ D E + ++ +
Sbjct: 54 VYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEM 113
Query: 267 ----QSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCN 322
+ + D T+ + + + L + G+++HG L T F S+L+ MY
Sbjct: 114 HRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHG-VLVKTGNDGTKFAVSSLIHMYSK 172
Query: 323 CKKADKGRWVFDGI-----------------------------------LRRTVAVWNAM 347
C K + +F+G L T++ WN +
Sbjct: 173 CGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTIS-WNTL 231
Query: 348 IAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRG 407
IAGYA+N +++EA+K+ + M E+ + + ++L K+ + +H V+K G
Sbjct: 232 IAGYAQNGYEEEALKMAVSME-ENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNG 290
Query: 408 FEKDKYVQNALMDMYSRMGRIEISKS-------------------------------IFG 436
+K+V + ++D+Y + G ++ ++S +F
Sbjct: 291 SYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFD 350
Query: 437 SMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVL 496
S+ +++V W M GY+ + D L L + + P+S+ +++VL
Sbjct: 351 SLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETN----------TPDSLVMVSVL 400
Query: 497 PGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVI 556
C EIH ++L+ + D + +A +DMY+KCG + + +FD R+ +
Sbjct: 401 GACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTV 460
Query: 557 TWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLN 616
+N +I HG ++ + F M + +P+E+T++A+ +AC H G+V EG
Sbjct: 461 MYNAMIAGCAHHGHEAKSFQHFEDM-----TEGGFKPDEITFMALLSACRHRGLVLEGEK 515
Query: 617 LFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKI 676
F +M + I P + HY C++DL G++ R+++A +L++ + K + L AC
Sbjct: 516 YFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSW 575
Query: 677 HQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCS 736
++N E+ + ++LLV+E + S Y+ ++N Y+S+G WD+ IR +M+ + GCS
Sbjct: 576 NKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCS 635
Query: 737 WIEHRDEVHKFLAGDASHPQSKELHEYL 764
W + H F + D SH +++ ++ L
Sbjct: 636 WANIDKQFHMFTSSDISHYETEAIYAML 663
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 131/498 (26%), Positives = 215/498 (43%), Gaps = 73/498 (14%)
Query: 170 DPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTN----NALVTMYAKLGRID 225
D T F + S+ H S GK NG F + NA++ Y + G ID
Sbjct: 157 DGTKFAVSSLIHMYSKC------GKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDID 210
Query: 226 EAKALFGLFDD-KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPAC 284
+A ++F + D +SWNT+I+ +QN EEAL M ++G++ D + + L
Sbjct: 211 KALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVL 270
Query: 285 SHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKK------------------- 325
S L+ L+ GKE+H L+N N FV S +VD+YC C
Sbjct: 271 SSLKSLKIGKEVHARVLKNGSY-SNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSA 329
Query: 326 -------ADKGRWV-----FDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDF 373
+ +G+ V FD + + + VW AM GY D ++L +
Sbjct: 330 SSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETN 389
Query: 374 TPNSTTLSSLLPACVRCKAFLDK-EGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISK 432
TP+S + S+L AC +A+++ + IHG+ ++ G DK + A +DMYS+ G +E ++
Sbjct: 390 TPDSLVMVSVLGAC-SLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAE 448
Query: 433 SIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTL 492
IF S RD V +N MI G C H H+ + Q +ED KP+ +T
Sbjct: 449 RIFDSSFERDTVMYNAMIAG---CAHHG------HEAKSFQ--HFEDMTEGGFKPDEITF 497
Query: 493 MTVLPGCXXXXXXXXXXE-----IHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVF 547
M +L C + I AY ++ + + +ID+Y K L+ + +
Sbjct: 498 MALLSACRHRGLVLEGEKYFKSMIEAY----NISPETGHYTCMIDLYGKAYRLDKAIELM 553
Query: 548 DQMPT--RNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAAC 605
+ + ++ + + A + E E+ +++ + SN YI I A
Sbjct: 554 EGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGS------RYIQIANAY 607
Query: 606 SHSGMVDEGLNLFHTMKA 623
+ SG DE + H M+
Sbjct: 608 ASSGRWDEMQRIRHQMRG 625
Score = 126 bits (316), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 169/388 (43%), Gaps = 77/388 (19%)
Query: 70 DNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHV 129
D+F ++K +A + ++ G+Q+HG + K G T AV+ SL++MY KCG ++
Sbjct: 124 DDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVS-SLIHMYSKCGKFKEVCNI 182
Query: 130 FDR--ISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLV---------- 177
F+ + D V+ N+MIAA CR N + TL+
Sbjct: 183 FNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEE 242
Query: 178 ----------------------SIAHACSNLRDGLSLGKQVHAYTFRNGDWRT------- 208
++ + S+L+ L +GK+VHA +NG +
Sbjct: 243 EALKMAVSMEENGLKWDEHSFGAVLNVLSSLKS-LKIGKEVHARVLKNGSYSNKFVSSGI 301
Query: 209 -------------------------FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWN 243
++ ++++ Y+ G++ EAK LF +K+LV W
Sbjct: 302 VDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWT 361
Query: 244 TVI---SSLSQNDR-FEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGY 299
+ +L Q D E A F+ + + PD + + S L ACS + GKEIHG+
Sbjct: 362 AMFLGYLNLRQPDSVLELARAFIANETNT---PDSLVMVSVLGACSLQAYMEPGKEIHGH 418
Query: 300 ALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDE 359
+LR L+D V +A VDMY C + +FD R ++NAMIAG A + + +
Sbjct: 419 SLRTGILMDKKLV-TAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAK 477
Query: 360 AIKLFIEMVYESDFTPNSTTLSSLLPAC 387
+ + F +M E F P+ T +LL AC
Sbjct: 478 SFQHFEDMT-EGGFKPDEITFMALLSAC 504
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 144/334 (43%), Gaps = 39/334 (11%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W + AQ+ +A+ +M G+ D +F AVL + + L +GK++H V
Sbjct: 227 SWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARV 286
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDL-------------------------------AGA 126
K G S V++ +V++Y KCG++ A
Sbjct: 287 LKNGSYSNKF-VSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEA 345
Query: 127 HHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD-PTSFTLVSIAHACSN 185
+FD +S+++ V W +M + P S +VS+ ACS
Sbjct: 346 KRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACS- 404
Query: 186 LRDGLSLGKQVHAYTFRNG---DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSW 242
L+ + GK++H ++ R G D + T A V MY+K G ++ A+ +F ++D V +
Sbjct: 405 LQAYMEPGKEIHGHSLRTGILMDKKLVT--AFVDMYSKCGNVEYAERIFDSSFERDTVMY 462
Query: 243 NTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALR 302
N +I+ + + ++ M + G +PD +T + L AC H ++ G++ +
Sbjct: 463 NAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIE 522
Query: 303 NTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI 336
++ + + ++D+Y + DK + +GI
Sbjct: 523 AYNISPETGHYTCMIDLYGKAYRLDKAIELMEGI 556
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 79/195 (40%), Gaps = 10/195 (5%)
Query: 68 PPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAH 127
PD+ +VL A + + GK+IHGH + G V + V+MY KCG++ A
Sbjct: 390 TPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVT-AFVDMYSKCGNVEYAE 448
Query: 128 HVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSN-- 185
+FD +RD V +N+MIA P T +++ AC +
Sbjct: 449 RIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRG 508
Query: 186 --LRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFD--DKDLVS 241
L + AY N T ++ +Y K R+D+A L D +KD V
Sbjct: 509 LVLEGEKYFKSMIEAY---NISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVI 565
Query: 242 WNTVISSLSQNDRFE 256
+++ S N E
Sbjct: 566 LGAFLNACSWNKNTE 580
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%)
Query: 512 HAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKG 571
H ++K + L+++Y+K G L +R VFD+M RNV +WN +I AY
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 572 EEALELFRRMVAEKD 586
+EA ELF E+D
Sbjct: 71 KEARELFESDNCERD 85
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 233 bits (595), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 146/479 (30%), Positives = 246/479 (51%), Gaps = 54/479 (11%)
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCK 391
VFD I V A+I + + EA + F ++ PN T +++ + +
Sbjct: 49 VFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLG-IRPNEFTFGTVIGSSTTSR 107
Query: 392 AFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI----------------------- 428
+ +H Y +K G + +V +A+++ Y ++ +
Sbjct: 108 DVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLIS 167
Query: 429 --------EISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDD 480
E + S+F +M R +V+WN +I G+ GR+++A+N DM R
Sbjct: 168 GYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLR--------- 218
Query: 481 ESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALK-QKLATDIAVGSALIDMYAKCGC 539
E + + PN T + IHA A+K ++ V ++LI Y+KCG
Sbjct: 219 EGVVI-PNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGN 277
Query: 540 LNLSRIVFDQMP--TRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVT 597
+ S + F+++ RN+++WN +I Y +G+GEEA+ +F +MV KD+N +RPN VT
Sbjct: 278 MEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMV--KDTN--LRPNNVT 333
Query: 598 YIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSS---DHYACLVDLLGRSGRVEEAYKLI 654
+ + AC+H+G++ EG F+ N +P+ +HYAC+VD+L RSGR +EA +LI
Sbjct: 334 ILGVLFACNHAGLIQEGYMYFNK-AVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELI 392
Query: 655 KTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLW 714
K+MP + + W +LLG C+IH N + ++AA ++L L+P S YV+LSN YS+ W
Sbjct: 393 KSMPLD-PGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENW 451
Query: 715 DQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRK 773
IR+KMKE G+++ GCSWIE RD++ F+ D ++ E++ L + Q + +
Sbjct: 452 QNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLEE 510
Score = 122 bits (307), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 158/358 (44%), Gaps = 47/358 (13%)
Query: 123 LAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHA 182
+ AH VFD I + D +S ++I + + P FT ++ +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 183 CSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRI----------------- 224
+ RD + LGKQ+H Y + G F +A++ Y KL +
Sbjct: 103 STTSRD-VKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVS 161
Query: 225 --------------DEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGV 270
+EA +LF ++ +V+WN VI SQ R EEA+ ML+ GV
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV 221
Query: 271 R-PDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKG 329
P+ T A+ A S++ GK IH A++ N FV ++L+ Y C +
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDS 281
Query: 330 RWVFDGIL--RRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
F+ + +R + WN+MI GYA N +EA+ +F +MV +++ PN+ T+ +L AC
Sbjct: 282 LLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Query: 388 VRCKAFLDKEG-------IHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSM 438
A L +EG ++ Y E + Y ++DM SR GR + ++ + SM
Sbjct: 342 --NHAGLIQEGYMYFNKAVNDYDDPNLLELEHYA--CMVDMLSRSGRFKEAEELIKSM 395
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 143/310 (46%), Gaps = 45/310 (14%)
Query: 224 IDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPA 283
I A +F + D++S VI + R EA +L G+RP+ T + + +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 284 CSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFD--------- 334
+ ++ GK++H YAL+ L N FVGSA+++ Y R FD
Sbjct: 103 STTSRDVKLGKQLHCYALK-MGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVS 161
Query: 335 ------GILR----------------RTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESD 372
G L+ R+V WNA+I G+++ ++EA+ F++M+ E
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV 221
Query: 373 FTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVK-RGFEKDKYVQNALMDMYSRMGRIEIS 431
PN +T + A + + IH +K G + +V N+L+ YS+ G +E S
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDS 281
Query: 432 KSIFGSM--DRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNS 489
F + ++R+IVSWN+MI GY GR ++A+ + M + + L+PN+
Sbjct: 282 LLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTN----------LRPNN 331
Query: 490 VTLMTVLPGC 499
VT++ VL C
Sbjct: 332 VTILGVLFAC 341
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 146/345 (42%), Gaps = 46/345 (13%)
Query: 48 QSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSV 107
+ S ++A + ++ G+ P+ F F V+ ++ D+ LGKQ+H + K G AS +V
Sbjct: 70 KESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLAS-NV 128
Query: 108 AVANSLVNMYGKCGDLAGAHHVFDRISD-------------------------------R 136
V ++++N Y K L A FD D R
Sbjct: 129 FVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPER 188
Query: 137 DHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNV-DPTSFTLVSIAHACSNLRDGLSLGKQ 195
V+WN++I + V P T A SN+ GK
Sbjct: 189 SVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASH-GAGKS 247
Query: 196 VHA--YTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDD--KDLVSWNTVISSLSQ 251
+HA F + F N+L++ Y+K G ++++ F ++ +++VSWN++I +
Sbjct: 248 IHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAH 307
Query: 252 NDRFEEALLFLYHMLQ-SGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNS 310
N R EEA+ M++ + +RP+ VT+ L AC+H +++ G A+ + D D +
Sbjct: 308 NGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD--DPN 365
Query: 311 FVG----SALVDMYCNCKKADKGRWVFDGI-LRRTVAVWNAMIAG 350
+ + +VDM + + + + L + W A++ G
Sbjct: 366 LLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGG 410
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVP-PDNFAFPAVLKAAAGVNDLNLGKQ 92
RS W + +Q+ +A++T+ +M+ GV P+ FP + A + + GK
Sbjct: 188 RSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKS 247
Query: 93 IHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISD--RDHVSWNSMI-AAAC 149
IH KF +V V NSL++ Y KCG++ + F+++ + R+ VSWNSMI A
Sbjct: 248 IHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAH 307
Query: 150 RFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSN---LRDG-LSLGKQVHAYTFRNGD 205
N+ P + T++ + AC++ +++G + K V+ Y + +
Sbjct: 308 NGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD--DPN 365
Query: 206 WRTFTNNA-LVTMYAKLGRIDEAKALF 231
+ A +V M ++ GR EA+ L
Sbjct: 366 LLELEHYACMVDMLSRSGRFKEAEELI 392
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 233 bits (595), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 165/509 (32%), Positives = 259/509 (50%), Gaps = 59/509 (11%)
Query: 265 MLQSGVRPDGVTLASALP----ACS-HLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDM 319
+L G+R GV +P AC+ + + GK +H +++ + + VGS+L+ M
Sbjct: 32 VLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIK-FGVCSDVMVGSSLISM 90
Query: 320 YCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLF------------IEM 367
Y C R VFD + R VA WNAMI GY N A LF IEM
Sbjct: 91 YGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEM 150
Query: 368 V--YESDF-TPNSTTLSSLLPACVR-CKAFLDKEGIHGYVVKRGFE-----------KDK 412
+ Y + L +P ++ KA+ G+ YV R E K+
Sbjct: 151 IKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGV--YVNNRKMEDARKFFEDIPEKNA 208
Query: 413 YVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRG 472
+V + +M Y R+G + +++IF + RD+V WNT+I GY G DDA++ +MQ
Sbjct: 209 FVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ-- 266
Query: 473 QDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALID 532
+ YE P++VT+ ++L C E+H+ + + + V +ALID
Sbjct: 267 -GEGYE--------PDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALID 317
Query: 533 MYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIR 592
MYAKCG L + VF+ + R+V N +I +HGKG+EALE+F M + +++
Sbjct: 318 MYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTM-----ESLDLK 372
Query: 593 PNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYK 652
P+E+T+IA+ AC H G + EGL +F MK ++P+ H+ CL+ LLGRSG+++EAY+
Sbjct: 373 PDEITFIAVLTACVHGGFLMEGLKIFSEMK-TQDVKPNVKHFGCLIHLLGRSGKLKEAYR 431
Query: 653 LIKTMPSNMKKVD-AWSSLLGACKIHQNLEVGEIAAKQL----LVLEPNVASHYVLLSNI 707
L+K M ++K D +LLGACK+H + E+ E K + + +H +SN+
Sbjct: 432 LVKEM--HVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNL 489
Query: 708 YSSAGLWDQAMDIRKKMKEMGVRKEPGCS 736
Y+ W A +R +M++ G+ K PG S
Sbjct: 490 YAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 172/375 (45%), Gaps = 51/375 (13%)
Query: 51 SFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGV-NDLNLGKQIHGHVFKFGYASTSVAV 109
S +QA+ Y + GV + P +L+A A V + LGK +H KFG S V V
Sbjct: 26 SPIQALVLYGGIRRRGVYFPGWV-PLILRACACVVPRVVLGKLLHSESIKFGVCS-DVMV 83
Query: 110 ANSLVNMYGKCG-------------------------------DLAGAHHVFDRISD-RD 137
+SL++MYGKCG D A +F+ IS R+
Sbjct: 84 GSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRN 143
Query: 138 HVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVH 197
V+W MI + + F L ++ L ++ K
Sbjct: 144 TVTWIEMIKGYGKRIEIEKAREL--------FERMPFELKNVKAWSVMLGVYVNNRKMED 195
Query: 198 AYTFRNG--DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRF 255
A F + F + +++ Y ++G + EA+A+F +DLV WNT+I+ +QN
Sbjct: 196 ARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYS 255
Query: 256 EEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLID-NSFVGS 314
++A+ ++M G PD VT++S L AC+ L G+E+H +L N I+ N FV +
Sbjct: 256 DDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVH--SLINHRGIELNQFVSN 313
Query: 315 ALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYES-DF 373
AL+DMY C + VF+ I R+VA N+MI+ A + EA+++F M ES D
Sbjct: 314 ALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTM--ESLDL 371
Query: 374 TPNSTTLSSLLPACV 388
P+ T ++L ACV
Sbjct: 372 KPDEITFIAVLTACV 386
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 145/338 (42%), Gaps = 47/338 (13%)
Query: 113 LVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPT 172
+++ Y + GD+ A +F R+ RD V WN++IA + +P
Sbjct: 214 MMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPD 273
Query: 173 SFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALF 231
+ T+ SI AC+ L +G++VH+ G + F +NAL+ MYAK G ++ A ++F
Sbjct: 274 AVTVSSILSACAQ-SGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVF 332
Query: 232 GLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLR 291
+ + N++IS L+ + + +EAL M ++PD +T + L AC H L
Sbjct: 333 ESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLM 392
Query: 292 TGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGY 351
G +I + K D ++ V + +I
Sbjct: 393 EGLKI-----------------------FSEMKTQD---------VKPNVKHFGCLIHLL 420
Query: 352 ARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDK---EGIHGYVVKRGF 408
R+ EA +L EM PN T L +LL A CK +D E + + G
Sbjct: 421 GRSGKLKEAYRLVKEM----HVKPNDTVLGALLGA---CKVHMDTEMAEQVMKIIETAGS 473
Query: 409 EKDKYVQN---ALMDMYSRMGRIEISKSIFGSMDRRDI 443
+ Y +N ++ ++Y+ R + ++++ M++R +
Sbjct: 474 ITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGL 511
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 7/187 (3%)
Query: 47 AQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTS 106
AQ+ AI + NM G PD ++L A A L++G+++H + G
Sbjct: 250 AQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQ 309
Query: 107 VAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXX 166
V+N+L++MY KCGDL A VF+ IS R NSMI+
Sbjct: 310 F-VSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMES 368
Query: 167 XNVDPTSFTLVSIAHACSN---LRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGR 223
++ P T +++ AC + L +GL + ++ + + + F L+ + + G+
Sbjct: 369 LDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKP-NVKHF--GCLIHLLGRSGK 425
Query: 224 IDEAKAL 230
+ EA L
Sbjct: 426 LKEAYRL 432
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 230 bits (586), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 216/407 (53%), Gaps = 18/407 (4%)
Query: 332 VFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCK 391
VF + R + WN +I ++R+ F ++I LF+ M ES P+ TL +L AC +
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 392 AFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMIT 451
+ IH +K GF +V +AL+ MY MG++ ++ +F M RD V + M
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 208
Query: 452 GYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEI 511
GYV G L + +M +SV ++++L C +
Sbjct: 209 GYVQQGEAMLGLAMFREMGYSG-----------FALDSVVMVSLLMACGQLGALKHGKSV 257
Query: 512 HAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKG 571
H + +++ + +G+A+ DMY KC L+ + VF M R+VI+W+ LI+ YG+ G
Sbjct: 258 HGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDV 317
Query: 572 EEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSS 631
+ +LF M+ E I PN VT++ + +AC+H G+V++ F M+ + I P
Sbjct: 318 VMSFKLFDEMLKEG-----IEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQ-EYNIVPEL 371
Query: 632 DHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLL 691
HYA + D + R+G +EEA K ++ MP + ++L CK++ N+EVGE A++L+
Sbjct: 372 KHYASVADCMSRAGLLEEAEKFLEDMPVKPDEA-VMGAVLSGCKVYGNVEVGERVARELI 430
Query: 692 VLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWI 738
L+P AS+YV L+ +YS+AG +D+A +R+ MKE + K PGCS I
Sbjct: 431 QLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 162/401 (40%), Gaps = 51/401 (12%)
Query: 102 YASTSVAVANSLVNMYGKCGDL-AGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXX 160
+ ++V +++ LV Y K L + VF + R+ SWN +I R
Sbjct: 61 FLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDL 120
Query: 161 XXXXXXXN-VDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMY 218
+ V P FTL I ACS R+ S G +H + G F ++ALV MY
Sbjct: 121 FLRMWRESCVRPDDFTLPLILRACSASREAKS-GDLIHVLCLKLGFSSSLFVSSALVIMY 179
Query: 219 AKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLA 278
+G++ A+ LF +D V + + Q L M SG D V +
Sbjct: 180 VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMV 239
Query: 279 SALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILR 338
S L AC L L+ GK +HG+ +R + + +G+A+ DMY C D VF + R
Sbjct: 240 SLLMACGQLGALKHGKSVHGWCIRRCSCLGLN-LGNAITDMYVKCSILDYAHTVFVNMSR 298
Query: 339 RTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEG 398
R V W+++I GY + + KLF EM+ E PN+ T +L AC
Sbjct: 299 RDVISWSSLILGYGLDGDVVMSFKLFDEMLKEG-IEPNAVTFLGVLSACA---------- 347
Query: 399 IHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGR 458
HG G + ++ LM Y+ + ++ S+ M R G
Sbjct: 348 -HG-----GLVEKSWLYFRLMQEYNIVPELKHYASVADCMSR---------------AGL 386
Query: 459 HDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
++A L DM P+KP+ + VL GC
Sbjct: 387 LEEAEKFLEDM--------------PVKPDEAVMGAVLSGC 413
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 94/253 (37%), Gaps = 43/253 (16%)
Query: 48 QSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSV 107
Q + ++ + M +G D+ ++L A + L GK +HG + + +
Sbjct: 212 QQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIR-RCSCLGL 270
Query: 108 AVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXX 167
+ N++ +MY KC L AH VF +S RD +SW+S+I
Sbjct: 271 NLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKE 330
Query: 168 NVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEA 227
++P + T + + AC A G ++++
Sbjct: 331 GIEPNAVTFLGVLSAC-----------------------------------AHGGLVEKS 355
Query: 228 KALFGLFDDKDLVS----WNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPA 283
F L + ++V + +V +S+ EEA FL M V+PD + + L
Sbjct: 356 WLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDM---PVKPDEAVMGAVLSG 412
Query: 284 CSHLEMLRTGKEI 296
C + G+ +
Sbjct: 413 CKVYGNVEVGERV 425
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 226 bits (575), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 127/359 (35%), Positives = 201/359 (55%), Gaps = 26/359 (7%)
Query: 511 IHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGK 570
+H + +DI+ +++I+MY+ CG + + VF+ MP RN+ TW +I + +G+
Sbjct: 203 VHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQ 262
Query: 571 GEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPS 630
GE+A++ F R E + +P+ + IF AC G ++EGL F +M +GI P
Sbjct: 263 GEDAIDTFSRFKQEGN-----KPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPC 317
Query: 631 SDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQL 690
+HY LV +L G ++EA + +++M N VD W +L+ ++H +L +G+ +
Sbjct: 318 MEHYVSLVKMLAEPGYLDEALRFVESMEPN---VDLWETLMNLSRVHGDLILGDRCQDMV 374
Query: 691 LVLEPNVASHYVLLSNIYSSAGLWD-QAMD-IRKKMKEMGVRKEPGCSWIEHRDEVHKFL 748
L+ + N S AGL ++ D +++K++ M G ++
Sbjct: 375 EQLDASRL-------NKESKAGLVPVKSSDLVKEKLQRMAKGPNYGIRYM---------A 418
Query: 749 AGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFG 808
AGD S P+++EL+ L++L + M + GYVP + LHDVD E K+ L H+ER A
Sbjct: 419 AGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFIST 478
Query: 809 LLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
L+TP + IRV KNLRVC DCH A K +SKIV RE+I RD +RFHH ++G CSC +YW
Sbjct: 479 FLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 223 bits (568), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 222/399 (55%), Gaps = 19/399 (4%)
Query: 373 FTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISK 432
F + + L ++ + + + LD IH V K GF +Q +L+ YS +G ++ ++
Sbjct: 61 FVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYAR 120
Query: 433 SIFGSM-DRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVT 491
+F ++++IV W MI+ Y +A+ L M E+ ++ + V
Sbjct: 121 QVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRM-----------EAEKIELDGVI 169
Query: 492 LMTVLPGCXXXXXXXXXXEIHAYALKQK--LATDIAVGSALIDMYAKCGCLNLSRIVFDQ 549
+ L C EI++ ++K+K LA D+ + ++L++MY K G +R +FD+
Sbjct: 170 VTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDE 229
Query: 550 MPTRNVITWNVLIMAYGMHGKGEEALELFRRM-VAEKDSNKEIRPNEVTYIAIFAACSHS 608
++V T+ +I Y ++G+ +E+LELF++M ++ + I PN+VT+I + ACSHS
Sbjct: 230 SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHS 289
Query: 609 GMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWS 668
G+V+EG F +M ++ ++P H+ C+VDL RSG +++A++ I MP V W
Sbjct: 290 GLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTV-IWR 348
Query: 669 SLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMG 728
+LLGAC +H N+E+GE +++ L+ + YV LSNIY+S G+WD+ +R ++++
Sbjct: 349 TLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRK-- 406
Query: 729 VRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENL 767
R+ PG SWIE +++F++G ++ + + E E L
Sbjct: 407 -RRMPGKSWIELGSIINEFVSGPDNNDEQLMMGEISEVL 444
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 152/331 (45%), Gaps = 57/331 (17%)
Query: 177 VSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFD 235
VS A S+L G+Q+HA + G + +LV Y+ +G +D A+ +F
Sbjct: 73 VSSAQKASSLD-----GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETP 127
Query: 236 DK-DLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGK 294
+K ++V W +IS+ ++N+ EA+ M + DGV + AL AC+ L ++ G+
Sbjct: 128 EKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGE 187
Query: 295 EIHGYAL-RNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYAR 353
EI+ ++ R L + + ++L++MY + +K R +FD +R+ V + +MI GYA
Sbjct: 188 EIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYAL 247
Query: 354 NEFDDEAIKLF-----IEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGF 408
N E+++LF I+ ++ TPN T +L AC H +V+ G
Sbjct: 248 NGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACS-----------HSGLVEEG- 295
Query: 409 EKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHD 468
++ ++ +MD ++ ++ FG M+ + G DA ++
Sbjct: 296 --KRHFKSMIMDY-----NLKPREAHFG-----------CMVDLFCRSGHLKDAHEFINQ 337
Query: 469 MQRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
M P+KPN+V T+L C
Sbjct: 338 M--------------PIKPNTVIWRTLLGAC 354
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 125/293 (42%), Gaps = 14/293 (4%)
Query: 70 DNFAFPAVLKAAAGVNDLNL-GKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHH 128
D+F+ +K ++ +L G+QIH V K G+ + + + SLV Y GD+ A
Sbjct: 63 DSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAV-IQIQTSLVGFYSSVGDVDYARQ 121
Query: 129 VFDRISDRDH-VSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLR 187
VFD ++ + V W +MI+A ++ + AC++L
Sbjct: 122 VFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADL- 180
Query: 188 DGLSLGKQVHAYTFRNGDWRTF---TNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNT 244
+ +G+++++ + + N+L+ MY K G ++A+ LF KD+ ++ +
Sbjct: 181 GAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTS 240
Query: 245 VISSLSQNDRFEEALLFLYHM------LQSGVRPDGVTLASALPACSHLEMLRTGKEIHG 298
+I + N + +E+L M + + P+ VT L ACSH ++ GK
Sbjct: 241 MIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFK 300
Query: 299 YALRNTDLIDNSFVGSALVDMYCNCKK-ADKGRWVFDGILRRTVAVWNAMIAG 350
+ + +L +VD++C D ++ ++ +W ++
Sbjct: 301 SMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGA 353
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/433 (32%), Positives = 216/433 (49%), Gaps = 52/433 (12%)
Query: 339 RTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEG 398
+T V+N +I Y ++ LF M+ S PN+ T SL+ A C +F G
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHML-ASHVQPNNLTFPSLIKAA--CSSFSVSYG 105
Query: 399 I--HGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIF--------------------- 435
+ HG +KRGF D +VQ + + Y +G +E S+ +F
Sbjct: 106 VALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRN 165
Query: 436 GSMDR----------RDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPL 485
G MD D+VSW T+I G+ G H AL + +M + +E +
Sbjct: 166 GEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQ--------NERAVI 217
Query: 486 KPNSVTLMTVLPGCXX--XXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLS 543
PN T ++VL C +IH Y + +++ +G+AL+DMY K G L ++
Sbjct: 218 TPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMA 277
Query: 544 RIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFA 603
+FDQ+ + V WN +I A +G+ ++ALE+F M + + PN +T +AI
Sbjct: 278 LTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMM-----KSSYVHPNGITLLAILT 332
Query: 604 ACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKK 663
AC+ S +VD G+ LF ++ + + I P+S+HY C+VDL+GR+G + +A I+++P
Sbjct: 333 ACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFE-PD 391
Query: 664 VDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKK 723
+LLGACKIH+N E+G KQL+ L+P YV LS + W +A +RK
Sbjct: 392 ASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKA 451
Query: 724 MKEMGVRKEPGCS 736
M E G+RK P S
Sbjct: 452 MIEAGIRKIPAYS 464
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 37/313 (11%)
Query: 43 LRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGY 102
+R + + +++ + +M+A+ V P+N FP+++KAA ++ G +HG K G+
Sbjct: 58 IRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGF 117
Query: 103 ASTSVAVANSLVNMYGKCGDLAGAHHVFD------------------------------- 131
V S V YG+ GDL + +FD
Sbjct: 118 LWDPF-VQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQ 176
Query: 132 RISDRDHVSWNSMIAAACR---FXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNL-R 187
R+ D VSW ++I + + P T VS+ +C+N +
Sbjct: 177 RMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQ 236
Query: 188 DGLSLGKQVHAYTF-RNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVI 246
G+ LGKQ+H Y + T AL+ MY K G ++ A +F DK + +WN +I
Sbjct: 237 GGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAII 296
Query: 247 SSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDL 306
S+L+ N R ++AL M S V P+G+TL + L AC+ +++ G ++ +
Sbjct: 297 SALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKI 356
Query: 307 IDNSFVGSALVDM 319
I S +VD+
Sbjct: 357 IPTSEHYGCVVDL 369
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 124/262 (47%), Gaps = 42/262 (16%)
Query: 168 NVDPTSFTLVS-IAHACSNLRDGLSLGKQVHAYTFRNGD-WRTFTNNALVTMYAKLGRID 225
+V P + T S I ACS+ +S G +H + G W F + V Y ++G ++
Sbjct: 81 HVQPNNLTFPSLIKAACSSF--SVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLE 138
Query: 226 EAKALF------------GLFDD-------------------KDLVSWNTVISSLSQNDR 254
++ +F L D D+VSW TVI+ S+
Sbjct: 139 SSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGL 198
Query: 255 FEEALLFLYHMLQSG---VRPDGVTLASALPACSHLEM--LRTGKEIHGYALRNTDLIDN 309
+AL+ M+Q+ + P+ T S L +C++ + +R GK+IHGY + + ++I
Sbjct: 199 HAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVM-SKEIILT 257
Query: 310 SFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVY 369
+ +G+AL+DMY + +FD I + V WNA+I+ A N +A+++F EM+
Sbjct: 258 TTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMF-EMMK 316
Query: 370 ESDFTPNSTTLSSLLPACVRCK 391
S PN TL ++L AC R K
Sbjct: 317 SSYVHPNGITLLAILTACARSK 338
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 220 bits (561), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 205/383 (53%), Gaps = 39/383 (10%)
Query: 487 PNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIV 546
P+ + + C ++H + L+ K D + + +I M+ +C + ++ V
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRV 293
Query: 547 FDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACS 606
FD M +++ +W++++ AY +G G++AL LF M ++PNE T++ +F AC+
Sbjct: 294 FDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHG-----LKPNEETFLTVFLACA 348
Query: 607 HSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDA 666
G ++E F +MK HGI P ++HY ++ +LG+ G + EA + I+ +P D
Sbjct: 349 TVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFE-PTADF 407
Query: 667 WSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKE 726
W ++ ++H ++++ + + ++ ++P+ A +++ I + K KE
Sbjct: 408 WEAMRNYARLHGDIDLEDYMEELMVDVDPSKA----VINKIPTPPP---------KSFKE 454
Query: 727 MGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEG--YVPDTSCVL 784
+ + + + +F + L Y + + K+G YVPDT VL
Sbjct: 455 TNM--------VTSKSRILEF----------RNLTFYKDEAKEMAAKKGVVYVPDTRFVL 496
Query: 785 HDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKNLRVCNDCHVATKFISKIVDRE 844
HD+D E KE L HSERLAIA+G++ TPP T+ + KNLRVC DCH K +SKI+ R
Sbjct: 497 HDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRV 556
Query: 845 IILRDVRRFHHFRNGTCSCGDYW 867
+I+RD +RFHHF++G CSCGDYW
Sbjct: 557 LIVRDNKRFHHFKDGKCSCGDYW 579
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 375 PNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSI 434
P+ L +C K+ + +H + ++ F D + N ++ M+ I +K +
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRV 293
Query: 435 FGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMT 494
F M +D+ SW+ M+ Y G DDAL+L +M + LKPN T +T
Sbjct: 294 FDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHG-----------LKPNEETFLT 342
Query: 495 VLPGC 499
V C
Sbjct: 343 VFLAC 347
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Query: 265 MLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCK 324
+L G PD +C++L+ L K++H + L+ + + + + ++ M+ C
Sbjct: 227 LLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQ-SKFRGDPKLNNMVISMFGECS 285
Query: 325 KADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLL 384
+ VFD ++ + + W+ M+ Y+ N D+A+ LF EM + PN T ++
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMT-KHGLKPNEETFLTVF 344
Query: 385 PACV 388
AC
Sbjct: 345 LACA 348
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 171 PTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRN---GDWRTFTNNALVTMYAKLGRIDEA 227
P V + +C+NL+ L K+VH + ++ GD + NN +++M+ + I +A
Sbjct: 234 PDRECFVLLFESCANLK-SLEHSKKVHDHFLQSKFRGDPKL--NNMVISMFGECSSITDA 290
Query: 228 KALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACS 285
K +F DKD+ SW+ ++ + S N ++AL M + G++P+ T + AC+
Sbjct: 291 KRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACA 348
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 219 bits (558), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 111/334 (33%), Positives = 188/334 (56%), Gaps = 20/334 (5%)
Query: 409 EKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHD 468
++D N L+D + I ++ +F SM RD+VSWN++I+GY +A+ L +
Sbjct: 180 QRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDE 239
Query: 469 MQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGS 528
M ++ LKP++V +++ L C IH Y +++L D + +
Sbjct: 240 MV-----------ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLAT 288
Query: 529 ALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSN 588
L+D YAKCG ++ + +F+ + + TWN +I MHG GE ++ FR+MV+
Sbjct: 289 GLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSG--- 345
Query: 589 KEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVE 648
I+P+ VT+I++ CSHSG+VDE NLF M++ + + HY C+ DLLGR+G +E
Sbjct: 346 --IKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIE 403
Query: 649 EAYKLIKTMPS---NMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLS 705
EA ++I+ MP N +K+ AWS LLG C+IH N+E+ E AA ++ L P Y ++
Sbjct: 404 EAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMV 463
Query: 706 NIYSSAGLWDQAMDIRKKM-KEMGVRKEPGCSWI 738
+Y++A W++ + +R+ + ++ V+K G S +
Sbjct: 464 EMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 112/269 (41%), Gaps = 34/269 (12%)
Query: 51 SFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVN--DLNLGKQIHGHVFKFGYAS---- 104
S L + + M VPPD FP V KA A DL L K +H +FG S
Sbjct: 95 SSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFT 154
Query: 105 --------------------------TSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDH 138
V N L++ K ++ A +FD + RD
Sbjct: 155 LNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDL 214
Query: 139 VSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHA 198
VSWNS+I+ + + P + +VS AC+ D GK +H
Sbjct: 215 VSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGD-WQKGKAIHD 273
Query: 199 YTFRNGDW-RTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEE 257
YT R + +F LV YAK G ID A +F L DK L +WN +I+ L+ + E
Sbjct: 274 YTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGEL 333
Query: 258 ALLFLYHMLQSGVRPDGVTLASALPACSH 286
+ + M+ SG++PDGVT S L CSH
Sbjct: 334 TVDYFRKMVSSGIKPDGVTFISVLVGCSH 362
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 143/333 (42%), Gaps = 49/333 (14%)
Query: 168 NVDPTSFTLVSIAHACSNLRDG-LSLGKQVHAYTFRNGDWR-TFTNNALVTMYAKLGRID 225
+V P T + AC+ ++G L+L K +H R G FT N L+ +Y+ + ID
Sbjct: 110 SVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPID 169
Query: 226 EAKALFG----------------------------LFDD---KDLVSWNTVISSLSQNDR 254
A LF LFD +DLVSWN++IS +Q +
Sbjct: 170 SALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNH 229
Query: 255 FEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGS 314
EA+ M+ G++PD V + S L AC+ + GK IH Y R ID SF+ +
Sbjct: 230 CREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFID-SFLAT 288
Query: 315 ALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFT 374
LVD Y C D +F+ +T+ WNAMI G A + + + F +MV S
Sbjct: 289 GLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMV-SSGIK 347
Query: 375 PNSTTLSSLLPACVRCKAFLDKEGIHG-----YVVKRGFEKDKYVQNALMDMYSRMGRIE 429
P+ T S+L C + + Y V R E Y + D+ R G IE
Sbjct: 348 PDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNR--EMKHY--GCMADLLGRAGLIE 403
Query: 430 ISKSIFGSM-----DRRDIVSWNTMITGYVVCG 457
+ + M +R +++W+ ++ G + G
Sbjct: 404 EAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHG 436
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 164/412 (39%), Gaps = 74/412 (17%)
Query: 224 IDEAKALFGLFDDKDLVSWNTVI--------SSLSQNDRFEEALLFLYHMLQSGVRPDGV 275
+ A ++F + +NT+I SSLS F E M + V PD
Sbjct: 64 VSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVE-------MRRRSVPPDFH 116
Query: 276 TLASALPACSHLEM--LRTGKEIHGYALR----------NTDLIDNSFVG---------- 313
T AC+ + L K +H ALR NT + S +
Sbjct: 117 TFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFD 176
Query: 314 ----------SALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKL 363
+ L+D ++ + R +FD + R + WN++I+GYA+ EAIKL
Sbjct: 177 ENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKL 236
Query: 364 FIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYS 423
F EMV P++ + S L AC + + + IH Y ++ D ++ L+D Y+
Sbjct: 237 FDEMV-ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYA 295
Query: 424 RMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESI 483
+ G I+ + IF + + +WN MITG + G + ++ M S
Sbjct: 296 KCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMV-----------SS 344
Query: 484 PLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALK-QKLATDIAVGSALIDMYAKCGCLNL 542
+KP+ VT ++VL GC + + ++ + D+ + G +
Sbjct: 345 GIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEE 404
Query: 543 SRIVFDQMPT-----RNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNK 589
+ + +QMP ++ W+ L+ +HG E +AEK +N+
Sbjct: 405 AAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIE---------IAEKAANR 447
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 63/152 (41%), Gaps = 1/152 (0%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
R +W + AQ + +AI + MVA G+ PDN A + L A A D GK I
Sbjct: 212 RDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAI 271
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXX 153
H + K +A LV+ Y KCG + A +F+ SD+ +WN+MI
Sbjct: 272 HDYT-KRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGN 330
Query: 154 XXXXXXXXXXXXXXNVDPTSFTLVSIAHACSN 185
+ P T +S+ CS+
Sbjct: 331 GELTVDYFRKMVSSGIKPDGVTFISVLVGCSH 362
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 219 bits (558), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 137/459 (29%), Positives = 229/459 (49%), Gaps = 59/459 (12%)
Query: 344 WNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYV 403
WN +I G++ + +++I ++I+M+ P+ T L+ + R +H V
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQML-RFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSV 134
Query: 404 VKRGFEKDKYVQNAL-------------------------------MDMYSRMGRIEISK 432
VK G E D ++ N L +D Y++ G + ++
Sbjct: 135 VKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSAR 194
Query: 433 SIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTL 492
+F M RD+V+W++MI GYV G ++ AL + M R K N VT+
Sbjct: 195 LVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSS----------KANEVTM 244
Query: 493 MTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPT 552
++V+ C +H Y L L + + ++LIDMYAKCG + + VF +
Sbjct: 245 VSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASV 304
Query: 553 R--NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGM 610
+ + + WN +I HG E+L+LF +M K I P+E+T++ + AACSH G+
Sbjct: 305 KETDALMWNAIIGGLASHGFIRESLQLFHKMRESK-----IDPDEITFLCLLAACSHGGL 359
Query: 611 VDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSL 670
V E + F ++K + G EP S+HYAC+VD+L R+G V++A+ I MP + S+
Sbjct: 360 VKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMP-----IKPTGSM 413
Query: 671 LGA----CKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKE 726
LGA C H NLE+ E K+L+ L+P+ YV L+N+Y+ + A +R+ M++
Sbjct: 414 LGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEK 473
Query: 727 MGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLE 765
GV+K G S ++ H+F+A D +H S +++ L+
Sbjct: 474 KGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQ 512
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 37/268 (13%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
++IS Y M+ G+ PD+ +P ++K+++ +++ LG +H V K G + + N+L
Sbjct: 91 KSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGL-EWDLFICNTL 149
Query: 114 VNMYG-------------------------------KCGDLAGAHHVFDRISDRDHVSWN 142
++MYG K GD+ A VFD +S+RD V+W+
Sbjct: 150 IHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWS 209
Query: 143 SMIAAAC-RFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTF 201
SMI R + T+VS+ AC++L L+ GK VH Y
Sbjct: 210 SMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHL-GALNRGKTVHRYIL 268
Query: 202 R-NGDWRTFTNNALVTMYAKLGRIDEAKALF--GLFDDKDLVSWNTVISSLSQNDRFEEA 258
+ +L+ MYAK G I +A ++F + D + WN +I L+ + E+
Sbjct: 269 DVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRES 328
Query: 259 LLFLYHMLQSGVRPDGVTLASALPACSH 286
L + M +S + PD +T L ACSH
Sbjct: 329 LQLFHKMRESKIDPDEITFLCLLAACSH 356
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 43/310 (13%)
Query: 222 GRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASAL 281
G +D A D WN VI S + E+++ ML+ G+ PD +T +
Sbjct: 56 GDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLM 115
Query: 282 PACSHLEMLRTGKEIHGYALR----------NT---------------DLID-----NSF 311
+ S L + G +H ++ NT L D N
Sbjct: 116 KSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLV 175
Query: 312 VGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYES 371
++++D Y R VFD + R V W++MI GY + ++A+++F +M+
Sbjct: 176 TWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMG 235
Query: 372 DFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEIS 431
N T+ S++ AC A + +H Y++ +Q +L+DMY++ G I +
Sbjct: 236 SSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDA 295
Query: 432 KSIF--GSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNS 489
S+F S+ D + WN +I G G ++L L H M+ + D P+
Sbjct: 296 WSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKID-----------PDE 344
Query: 490 VTLMTVLPGC 499
+T + +L C
Sbjct: 345 ITFLCLLAAC 354
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 156/385 (40%), Gaps = 43/385 (11%)
Query: 92 QIHGHVFKFGYASTSVAVANSL-VNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACR 150
+IH + G + V+ +L + GD+ A+ ++SD + WN +I
Sbjct: 26 KIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSN 85
Query: 151 FXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTF 209
+ P T + + S L + LG +H ++G +W F
Sbjct: 86 SRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNR-KLGGSLHCSVVKSGLEWDLF 144
Query: 210 TNNALVTMY-------------------------------AKLGRIDEAKALFGLFDDKD 238
N L+ MY AK G + A+ +F ++D
Sbjct: 145 ICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERD 204
Query: 239 LVSWNTVISSLSQNDRFEEALLFLYHMLQSG-VRPDGVTLASALPACSHLEMLRTGKEIH 297
+V+W+++I + + +AL M++ G + + VT+ S + AC+HL L GK +H
Sbjct: 205 VVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVH 264
Query: 298 GYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVF--DGILRRTVAVWNAMIAGYARNE 355
Y L + L + ++L+DMY C VF + +WNA+I G A +
Sbjct: 265 RYIL-DVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHG 323
Query: 356 FDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGY--VVKRGFEKDKY 413
F E+++LF +M ES P+ T LL AC L KE H + + + G E
Sbjct: 324 FIRESLQLFHKM-RESKIDPDEITFLCLLAAC--SHGGLVKEAWHFFKSLKESGAEPKSE 380
Query: 414 VQNALMDMYSRMGRIEISKSIFGSM 438
++D+ SR G ++ + M
Sbjct: 381 HYACMVDVLSRAGLVKDAHDFISEM 405
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 160/384 (41%), Gaps = 62/384 (16%)
Query: 389 RCKAFLDKEGIHGYVVKRGF-EKDKYVQNAL-MDMYSRMGRIEISKSIFGSMDRRDIVSW 446
+CK+ + IH ++ G E++ +V L S G ++ + + W
Sbjct: 17 QCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGW 76
Query: 447 NTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXX 506
N +I G+ + ++++ M R L P+ +T ++
Sbjct: 77 NFVIRGFSNSRNPEKSISVYIQMLR-----------FGLLPDHMTYPFLMKSSSRLSNRK 125
Query: 507 XXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYG 566
+H +K L D+ + + LI MY +R +FD+MP +N++TWN ++ AY
Sbjct: 126 LGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYA 185
Query: 567 MHG-----------------------------KGE--EALELFRRMVAEKDSNKEIRPNE 595
G +GE +ALE+F +M+ S + NE
Sbjct: 186 KSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSS----KANE 241
Query: 596 VTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIK 655
VT +++ AC+H G ++ G + + H + + L+D+ + G + +A+ +
Sbjct: 242 VTMVSVICACAHLGALNRGKTVHRYILDVH-LPLTVILQTSLIDMYAKCGSIGDAWSVF- 299
Query: 656 TMPSNMKKVDA--WSSLLGACKIH----QNLEVGEIAAKQLLVLEPNVASHYVLLSNIYS 709
+++K+ DA W++++G H ++L++ + ++P+ + LL+ S
Sbjct: 300 -YRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRES--KIDPDEITFLCLLAAC-S 355
Query: 710 SAGLWDQAMDIRKKMKEMGVRKEP 733
GL +A K +KE G EP
Sbjct: 356 HGGLVKEAWHFFKSLKESGA--EP 377
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 4/155 (2%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDN-FAFPAVLKAAAGVNDLNLGKQ 92
R W + + + +A+ + M+ G N +V+ A A + LN GK
Sbjct: 203 RDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKT 262
Query: 93 IHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDR--ISDRDHVSWNSMIAAACR 150
+H ++ + +V + SL++MY KCG + A VF R + + D + WN++I
Sbjct: 263 VHRYILDV-HLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLAS 321
Query: 151 FXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSN 185
+DP T + + ACS+
Sbjct: 322 HGFIRESLQLFHKMRESKIDPDEITFLCLLAACSH 356
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 216 bits (551), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 156/564 (27%), Positives = 264/564 (46%), Gaps = 67/564 (11%)
Query: 241 SWNTVISSLSQNDRFEE--ALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHG 298
SW+T++ +L+ RF L ++ G +PD L L + + +++HG
Sbjct: 23 SWSTIVPALA---RFGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHG 79
Query: 299 YALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDD 358
Y ++ + N+ + ++L+ Y + VFD + V WN++++GY ++
Sbjct: 80 YVTKH-GFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 359 EAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEK-DKYVQNA 417
E I LF+E+ + SD PN + ++ L AC R IH +VK G EK + V N
Sbjct: 139 EGICLFLEL-HRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNC 197
Query: 418 LMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEY 477
L+DMY + G ++ + +F M+ +D VSWN ++ G+ + L H M Y
Sbjct: 198 LIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTY 257
Query: 478 EDDESIPLK----------------PNSVTLMTVLPGCXXXXXXXXXXE----------- 510
+ +K PNS + T+L G E
Sbjct: 258 NELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVR 317
Query: 511 ------------------------IHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIV 546
IHA A K L + + V SALIDMY+KCG L + ++
Sbjct: 318 FDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELM 377
Query: 547 FDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACS 606
F MP +N+I WN +I Y +G EA++LF ++ E + ++P+ T++ + A CS
Sbjct: 378 FWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQE----RFLKPDRFTFLNLLAVCS 433
Query: 607 HSGM-VDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVD 665
H + ++ L F M + I+PS +H L+ +G+ G V +A ++I+ V
Sbjct: 434 HCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGV- 492
Query: 666 AWSSLLGACKIHQNLEVGE-IAAKQLLVLEPNVASH-YVLLSNIYSSAGLWDQAMDIRKK 723
AW +LLGAC ++L+ + +AAK + + + + + Y+++SN+Y+ W + IRK
Sbjct: 493 AWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKI 552
Query: 724 MKEMGVRKEPGCSWIEHRDEVHKF 747
M+E GV KE G SWI+ R + +
Sbjct: 553 MRESGVLKEVGSSWIDSRTKCSSY 576
Score = 146 bits (368), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 191/440 (43%), Gaps = 55/440 (12%)
Query: 62 MVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCG 121
++ G PD +L+ + ++L +Q+HG+V K G+ S + ++NSL+ Y
Sbjct: 46 LINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNT-RLSNSLMRFYKTSD 104
Query: 122 DLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAH 181
L AH VFD + D D +SWNS+++ + +V P F+ +
Sbjct: 105 SLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALA 164
Query: 182 ACSNLRDGLSLGKQVHAYTFRNG--DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDL 239
AC+ L LG +H+ + G N L+ MY K G +D+A +F ++KD
Sbjct: 165 ACARLHLS-PLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDT 223
Query: 240 VSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGY 299
VSWN +++S S+N + E L F + M PD VT
Sbjct: 224 VSWNAIVASCSRNGKLELGLWFFHQM----PNPDTVTY---------------------- 257
Query: 300 ALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDE 359
+ L+D + + V + + WN ++ GY +E E
Sbjct: 258 --------------NELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGE 303
Query: 360 AIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALM 419
A + F +M + S + +LS +L A IH K G + V +AL+
Sbjct: 304 ATEFFTKM-HSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALI 362
Query: 420 DMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYED 479
DMYS+ G ++ ++ +F +M R++++ WN MI+GY G +A+ L + +++ +
Sbjct: 363 DMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERF----- 417
Query: 480 DESIPLKPNSVTLMTVLPGC 499
LKP+ T + +L C
Sbjct: 418 -----LKPDRFTFLNLLAVC 432
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 160/358 (44%), Gaps = 40/358 (11%)
Query: 38 AWIDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHV 97
+W + QS F + I + + + V P+ F+F A L A A ++ LG IH +
Sbjct: 123 SWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKL 182
Query: 98 FKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXX 157
K G +V V N L++MYGKCG + A VF + ++D VSWN+++A+ R
Sbjct: 183 VKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSR------- 235
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTM 217
L GL Q+ N D T T N L+
Sbjct: 236 -------------------------NGKLELGLWFFHQM-----PNPD--TVTYNELIDA 263
Query: 218 YAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTL 277
+ K G + A + + + SWNT+++ +++ EA F M SGVR D +L
Sbjct: 264 FVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSL 323
Query: 278 ASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGIL 337
+ L A + L ++ G IH A L V SAL+DMY C +F +
Sbjct: 324 SIVLAAVAALAVVPWGSLIHACA-HKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMP 382
Query: 338 RRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLD 395
R+ + VWN MI+GYARN EAIKLF ++ E P+ T +LL C C+ ++
Sbjct: 383 RKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPME 440
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 220/432 (50%), Gaps = 36/432 (8%)
Query: 345 NAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGI-HGYV 403
N + Y + +A+ + +++ F P+S T SL+ +C+ +D + HG
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDIL-RFGFVPDSYTFVSLI-SCIEKTCCVDSGKMCHGQA 144
Query: 404 VKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDAL 463
+K G ++ VQN+LM MY+ G ++++K +F + +RDIVSWN++I G V R+ D L
Sbjct: 145 IKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMV---RNGDVL 201
Query: 464 -----------------NLLHDMQRGQDDE------YEDDESIPLKPNSVTLMTVLPGCX 500
N++ G ++ + + + N TL+ +L C
Sbjct: 202 AAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACG 261
Query: 501 XXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNV 560
+HA ++ L + + + +ALIDMY KC + L+R +FD + RN +TWNV
Sbjct: 262 RSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNV 321
Query: 561 LIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHT 620
+I+A+ +HG+ E LELF M+ N +RP+EVT++ + C+ +G+V +G + +
Sbjct: 322 MILAHCLHGRPEGGLELFEAMI-----NGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSL 376
Query: 621 MKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSN--MKKVDAWSSLLGACKIHQ 678
M I+P+ H C+ +L +G EEA + +K +P + W++LL + +
Sbjct: 377 MVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTG 436
Query: 679 NLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWI 738
N +GE AK L+ +P +Y LL NIYS G W+ +R+ +KE + + PGC +
Sbjct: 437 NPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLV 496
Query: 739 EHRDEVHKFLAG 750
+ ++ VH G
Sbjct: 497 DLKEIVHGLRLG 508
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 145/338 (42%), Gaps = 49/338 (14%)
Query: 195 QVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDD-KDLVSWNTVISSLSQND 253
QVHA +G++ + ++ + + R ++ ++ L N V + +
Sbjct: 40 QVHARLITSGNF--WDSSWAIRLLKSSSRFGDSSYTVSIYRSIGKLYCANPVFKAYLVSS 97
Query: 254 RFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSF-V 312
++AL F + +L+ G PD T S + + +GK HG A+++ D V
Sbjct: 98 SPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG--CDQVLPV 155
Query: 313 GSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARN-----------EFDDE-- 359
++L+ MY C D + +F I +R + WN++IAG RN E D+
Sbjct: 156 QNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNI 215
Query: 360 ------------------AIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHG 401
+I LF EMV + F N +TL LL AC R + +H
Sbjct: 216 ISWNIMISAYLGANNPGVSISLFREMV-RAGFQGNESTLVLLLNACGRSARLKEGRSVHA 274
Query: 402 YVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDD 461
+++ + AL+DMY + + +++ IF S+ R+ V+WN MI + + GR +
Sbjct: 275 SLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEG 334
Query: 462 ALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
L L M G L+P+ VT + VL GC
Sbjct: 335 GLELFEAMINGM-----------LRPDEVTFVGVLCGC 361
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 163/422 (38%), Gaps = 85/422 (20%)
Query: 49 SSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVA 108
SSS QA+ Y +++ G PD++ F +++ ++ GK HG K G +
Sbjct: 96 SSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG-CDQVLP 154
Query: 109 VANSLVNMYGKCG-------------------------------DLAGAHHVFDRISDRD 137
V NSL++MY CG D+ AH +FD + D++
Sbjct: 155 VQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKN 214
Query: 138 HVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVH 197
+SWN MI+A TLV + +AC L G+ VH
Sbjct: 215 IISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGR-SARLKEGRSVH 273
Query: 198 AYTFRNGDWRTFTNN------ALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQ 251
A R TF N+ AL+ MY K + A+ +F ++ V+WN +I +
Sbjct: 274 ASLIR-----TFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCL 328
Query: 252 NDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSF 311
+ R E L M+ +RPD VT L C+ ++ G+ +
Sbjct: 329 HGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYY-------------- 374
Query: 312 VGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYES 371
S +VD + K +W + Y+ F +EA + ++ + +
Sbjct: 375 --SLMVDEF-QIKPNFGHQWCMANL--------------YSSAGFPEEAEEA-LKNLPDE 416
Query: 372 DFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKD----KYVQNALMDMYSRMGR 427
D TP ST ++LL + F + + K E D KY + LM++YS GR
Sbjct: 417 DVTPESTKWANLLSS----SRFTGNPTLGESIAKSLIETDPLNYKY-YHLLMNIYSVTGR 471
Query: 428 IE 429
E
Sbjct: 472 WE 473
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 130/311 (41%), Gaps = 36/311 (11%)
Query: 171 PTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKA 229
P S+T VS+ +C + GK H ++G D N+L+ MY G +D AK
Sbjct: 116 PDSYTFVSLI-SCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKK 174
Query: 230 LF----------------------------GLFD---DKDLVSWNTVISSLSQNDRFEEA 258
LF LFD DK+++SWN +IS+ + +
Sbjct: 175 LFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVS 234
Query: 259 LLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVD 318
+ M+++G + + TL L AC L+ G+ +H +R T L + + +AL+D
Sbjct: 235 ISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIR-TFLNSSVVIDTALID 293
Query: 319 MYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNST 378
MY CK+ R +FD + R WN MI + + + ++LF M+ P+
Sbjct: 294 MYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMI-NGMLRPDEV 352
Query: 379 TLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYV-QNALMDMYSRMGRIEISKSIFGS 437
T +L C R + + +V K + Q + ++YS G E ++ +
Sbjct: 353 TFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKN 412
Query: 438 MDRRDIVSWNT 448
+ D+ +T
Sbjct: 413 LPDEDVTPEST 423
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 119/282 (42%), Gaps = 28/282 (9%)
Query: 399 IHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGR 458
+H ++ G D L+ SR G + SI+ S+ + + N + Y+V
Sbjct: 41 VHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGK--LYCANPVFKAYLVSSS 98
Query: 459 HDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQ 518
AL D+ R P+S T ++++ H A+K
Sbjct: 99 PKQALGFYFDILR-----------FGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKH 147
Query: 519 KLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELF 578
+ V ++L+ MY CG L+L++ +F ++P R++++WN +I +G A +LF
Sbjct: 148 GCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLF 207
Query: 579 RRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLV 638
M +K I + I+ + ++ G+ ++LF M G + + L+
Sbjct: 208 DEM-----PDKNIISWNIM-ISAYLGANNPGV---SISLFREM-VRAGFQGNESTLVLLL 257
Query: 639 DLLGRSGRVEEAY----KLIKTMPSNMKKVD-AWSSLLGACK 675
+ GRS R++E LI+T ++ +D A + G CK
Sbjct: 258 NACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCK 299
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 213 bits (541), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 128/359 (35%), Positives = 185/359 (51%), Gaps = 31/359 (8%)
Query: 405 KRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALN 464
K GFE YVQ AL+ MY G + + +F M R+ V+WN MITG G + AL
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 465 LLHDMQR-----------GQDDEYEDDESIPL----------KPNSVTLMTVLPGCXXXX 503
L M G + E+I L KPN +T++ +LP
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 504 XXXXXXEIHAYALKQKLAT-DIAVGSALIDMYAKCGCLNLSRIVFDQMPT--RNVITWNV 560
+HAY K+ DI V ++LID YAKCGC+ + F ++P +N+++W
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 561 LIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEG-LNLFH 619
+I A+ +HG G+EA+ +F+ M ++PN VT I++ ACSH G+ +E L F+
Sbjct: 331 MISAFAIHGMGKEAVSMFKDM-----ERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFN 385
Query: 620 TMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQN 679
TM + I P HY CLVD+L R GR+EEA K+ +P K V W LLGAC ++ +
Sbjct: 386 TMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAV-VWRMLLGACSVYDD 444
Query: 680 LEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWI 738
E+ E ++L+ LE + YVL+SNI+ G + A RK+M GV K PG S +
Sbjct: 445 AELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 132/286 (46%), Gaps = 17/286 (5%)
Query: 309 NSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMV 368
N + ++ N +K + + RTV W +I GYAR + EAI LF MV
Sbjct: 188 NPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMV 247
Query: 369 YESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEK-DKYVQNALMDMYSRMGR 427
PN T+ ++LPA +H YV KRGF D V N+L+D Y++ G
Sbjct: 248 ACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGC 307
Query: 428 IEISKSIFGSMD--RRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPL 485
I+ + F + R+++VSW TMI+ + + G +A+++ DM+R + L
Sbjct: 308 IQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMER-----------LGL 356
Query: 486 KPNSVTLMTVLPGCXX--XXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLS 543
KPN VT+++VL C + + K+ D+ L+DM + G L +
Sbjct: 357 KPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEA 416
Query: 544 RIVFDQMPT-RNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSN 588
+ ++P + W +L+ A ++ E A + R+++ + S+
Sbjct: 417 EKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSH 462
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 116/261 (44%), Gaps = 45/261 (17%)
Query: 67 VPP-DNFAFPAVLKAAAG--VNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDL 123
+PP D+F + +LKA++ L LG +HG K G+ S V V +LV MY G++
Sbjct: 116 LPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFES-HVYVQTALVGMYLVGGNM 174
Query: 124 AGAHHVFDRISDRDHVSWNSMIA----------AACRFXXXXXXXXXXXXXXXXN----- 168
AH VFD + +R+ V+WN MI A C
Sbjct: 175 IDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVD 234
Query: 169 -----------------VDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG----DWR 207
+ P T+++I A NL D L + VHAY + G D R
Sbjct: 235 KPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGD-LKMCGSVHAYVGKRGFVPCDIR 293
Query: 208 TFTNNALVTMYAKLGRIDEAKALFGLFDD--KDLVSWNTVISSLSQNDRFEEALLFLYHM 265
N+L+ YAK G I A F + K+LVSW T+IS+ + + +EA+ M
Sbjct: 294 V--TNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDM 351
Query: 266 LQSGVRPDGVTLASALPACSH 286
+ G++P+ VT+ S L ACSH
Sbjct: 352 ERLGLKPNRVTMISVLNACSH 372
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 120/294 (40%), Gaps = 45/294 (15%)
Query: 208 TFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQ 267
+ ALV MY G + +A +F +++ V+WN +I+ L+ FE+AL FL M
Sbjct: 158 VYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPN 217
Query: 268 --------------------------------SGVRPDGVTLASALPACSHLEMLRTGKE 295
++P+ +T+ + LPA +L L+
Sbjct: 218 RTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGS 277
Query: 296 IHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGIL--RRTVAVWNAMIAGYAR 353
+H Y + + + V ++L+D Y C F I R+ + W MI+ +A
Sbjct: 278 VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAI 337
Query: 354 NEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC----VRCKAFLDKEGIHGYVVKRGFE 409
+ EA+ +F +M PN T+ S+L AC + + FL E + V +
Sbjct: 338 HGMGKEAVSMFKDM-ERLGLKPNRVTMISVLNACSHGGLAEEEFL--EFFNTMVNEYKIT 394
Query: 410 KDKYVQNALMDMYSRMGRIEISKSIFGSMD-RRDIVSWNTMITGYVVCGRHDDA 462
D L+DM R GR+E ++ I + V W ++ C +DDA
Sbjct: 395 PDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGA---CSVYDDA 445
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 10/233 (4%)
Query: 34 RSPSAWIDHLRLQAQSSSFLQAISTYANMVAA-GVPPDNFAFPAVLKAAAGVNDLNLGKQ 92
R+ +W + A+ +AI ++ MVA + P+ A+L A + DL +
Sbjct: 218 RTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGS 277
Query: 93 IHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISD--RDHVSWNSMIAAACR 150
+H +V K G+ + V NSL++ Y KCG + A F I + ++ VSW +MI+A
Sbjct: 278 VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAI 337
Query: 151 FXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFT 210
+ P T++S+ +ACS+ GL+ + + + +++
Sbjct: 338 HGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSH--GGLAEEEFLEFFNTMVNEYKITP 395
Query: 211 N----NALVTMYAKLGRIDEA-KALFGLFDDKDLVSWNTVISSLSQNDRFEEA 258
+ LV M + GR++EA K + ++ V W ++ + S D E A
Sbjct: 396 DVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELA 448
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 210 bits (534), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 151/549 (27%), Positives = 262/549 (47%), Gaps = 29/549 (5%)
Query: 205 DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYH 264
D T T N + K G ++ A LF ++D+VSWNT+IS L E + +
Sbjct: 67 DKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFD 126
Query: 265 MLQSGVRPDGVTLA--SALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCN 322
M + +RP T + ++L C +R G++IHG A+ + N V ++++DMY
Sbjct: 127 MQRWEIRPTEFTFSILASLVTC-----VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRR 181
Query: 323 CKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSS 382
D VF + R V WN +I + + + A+ F M E + P+ T+S
Sbjct: 182 LGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLM-REMEIQPDEYTVSM 240
Query: 383 LLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRD 442
++ C + + +K GF + V A +DM+S+ R++ S +F +++ D
Sbjct: 241 VVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWD 300
Query: 443 IVSWNTMITGYV--VCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCX 500
V N+MI Y CG +DAL L + Q ++P+ T +VL
Sbjct: 301 SVLCNSMIGSYSWHCCG--EDALRLFI-LAMTQS----------VRPDKFTFSSVLSS-M 346
Query: 501 XXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNV 560
++H+ +K D AV ++L++MY K G ++L+ VF + +++I WN
Sbjct: 347 NAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNT 406
Query: 561 LIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHT 620
+IM + + E+L +F +++ N+ ++P+ VT + I AC ++G V+EG+ +F +
Sbjct: 407 VIMGLARNSRAVESLAIFNQLLM----NQSLKPDRVTLMGILVACCYAGFVNEGIQIFSS 462
Query: 621 MKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNL 680
M+ HG+ P ++HYAC+++LL R G + EA + +P W +L A +
Sbjct: 463 MEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFE-PSSHIWEPILCASLDLGDT 521
Query: 681 EVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEH 740
+ E AK +L EP + Y++L IY W+ ++ +R M E ++ G S I
Sbjct: 522 RLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISI 581
Query: 741 RDEVHKFLA 749
V F A
Sbjct: 582 ESSVFSFEA 590
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/522 (24%), Positives = 231/522 (44%), Gaps = 62/522 (11%)
Query: 69 PDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHH 128
P + F ++ + L K +H + + G+ T+ N + +Y K G + A
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYW-GNRCLQLYFKSGSVINALQ 60
Query: 129 VFDRISD-------------------------------RDHVSWNSMIAAACRFXXXXXX 157
+FD I D RD VSWN+MI+
Sbjct: 61 LFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYG 120
Query: 158 XXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG--DWRTFTNNALV 215
+ PT FT +A + +R G+Q+H +G + N+++
Sbjct: 121 IRVFFDMQRWEIRPTEFTFSILASLVTCVRH----GEQIHGNAICSGVSRYNLVVWNSVM 176
Query: 216 TMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGV 275
MY +LG D A ++F +D+D+VSWN +I S S + E AL + M + ++PD
Sbjct: 177 DMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEY 236
Query: 276 TLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDG 335
T++ + CS L L GK+ ++ + NS V A +DM+ C + D +F
Sbjct: 237 TVSMVVSICSDLRELSKGKQALALCIK-MGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRE 295
Query: 336 ILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLD 395
+ + + N+MI Y+ + ++A++LFI + +S P+ T SS+L + A +
Sbjct: 296 LEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQS-VRPDKFTFSSVLSS---MNAVML 351
Query: 396 KEG--IHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGY 453
G +H V+K GF+ D V +LM+MY + G ++++ +F D +D++ WNT+I G
Sbjct: 352 DHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGL 411
Query: 454 VVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHA 513
R ++L + + + Q LKP+ VTLM +L C +I +
Sbjct: 412 ARNSRAVESLAIFNQLLMNQ----------SLKPDRVTLMGILVACCYAGFVNEGIQIFS 461
Query: 514 YALKQKLATDIAVG----SALIDMYAKCGCLNLSRIVFDQMP 551
K A + G + +I++ + G +N ++ + D++P
Sbjct: 462 SMEK---AHGVNPGNEHYACIIELLCRVGMINEAKDIADKIP 500
Score = 133 bits (334), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 184/392 (46%), Gaps = 28/392 (7%)
Query: 55 AISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLV 114
I + +M + P F F + A+ V + G+QIHG+ G + ++ V NS++
Sbjct: 120 GIRVFFDMQRWEIRPTEFTFSIL---ASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVM 176
Query: 115 NMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSF 174
+MY + G A VF + DRD VSWN +I + + P +
Sbjct: 177 DMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEY 236
Query: 175 TLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVT-----MYAKLGRIDEAKA 229
T+ + CS+LR+ LS GKQ A + G F +N++V M++K R+D++
Sbjct: 237 TVSMVVSICSDLRE-LSKGKQALALCIKMG----FLSNSIVLGAGIDMFSKCNRLDDSVK 291
Query: 230 LFGLFDDKDLVSWNTVISSLSQNDRFEEAL-LFLYHMLQSGVRPDGVTLASALPACSHLE 288
LF + D V N++I S S + E+AL LF+ M QS VRPD T +S L + + +
Sbjct: 292 LFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQS-VRPDKFTFSSVLSSMNAV- 349
Query: 289 MLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMI 348
ML G ++H ++ +D + V ++L++MY D VF + + WN +I
Sbjct: 350 MLDHGADVHSLVIKLGFDLDTA-VATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVI 408
Query: 349 AGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGF 408
G ARN E++ +F +++ P+ TL +L AC C A EGI +
Sbjct: 409 MGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVAC--CYAGFVNEGIQIF---SSM 463
Query: 409 EKDKYVQNA------LMDMYSRMGRIEISKSI 434
EK V ++++ R+G I +K I
Sbjct: 464 EKAHGVNPGNEHYACIIELLCRVGMINEAKDI 495
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 202 bits (513), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 184/354 (51%), Gaps = 28/354 (7%)
Query: 399 IHGYVVKRGF-EKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCG 457
+HG V K GF + + + L+ Y++ G + ++ +F M R V+WN MI GY
Sbjct: 133 VHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYC--- 189
Query: 458 RHDDALNLLHDMQRGQD--DEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYA 515
H D N H+ ++ + S ++P T++ VL +H Y
Sbjct: 190 SHKDKGN--HNARKAMVLFRRFSCCGS-GVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 516 LKQKLA--TDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEE 573
K D+ +G+AL+DMY+KCGCLN + VF+ M +NV TW + ++G+G E
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 574 ALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDH 633
L RM + I+PNE+T+ ++ +A H G+V+EG+ LF +MK G+ P +H
Sbjct: 307 TPNLLNRM-----AESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEH 361
Query: 634 YACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDA--WSSLLGACKIHQNLEVGEIAAKQLL 691
Y C+VDLLG++GR++EAY+ I MP K DA SL AC I+ +GE K LL
Sbjct: 362 YGCIVDLLGKAGRIQEAYQFILAMPI---KPDAILLRSLCNACSIYGETVMGEEIGKALL 418
Query: 692 VLE-------PNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWI 738
+E + YV LSN+ + G W + +RK+MKE ++ PG S++
Sbjct: 419 EIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 105/220 (47%), Gaps = 11/220 (5%)
Query: 87 LNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIA 146
L +G+ +HG V K G+ S + +L++ Y K GDL A VFD + +R V+WN+MI
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 147 AACRFXXXXXXXXXXXXXXX-------XNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAY 199
C V PT T+V + A S L +G VH Y
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQ-TGLLEIGSLVHGY 245
Query: 200 TFRNG---DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFE 256
+ G + F ALV MY+K G ++ A ++F L K++ +W ++ + L+ N R
Sbjct: 246 IEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGN 305
Query: 257 EALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEI 296
E L M +SG++P+ +T S L A H+ ++ G E+
Sbjct: 306 ETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIEL 345
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 137/357 (38%), Gaps = 57/357 (15%)
Query: 190 LSLGKQVHAYTFRNGDW--RTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVIS 247
L +G+ VH + G L+ YAK G + A+ +F ++ V+WN +I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 248 SL-------SQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGY- 299
+ N R L + SGVRP T+ L A S +L G +HGY
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 300 -ALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDD 358
L T +D F+G+ALVDMY C + VF+ + + V W +M G A N +
Sbjct: 247 EKLGFTPEVD-VFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGN 305
Query: 359 EAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNAL 418
E L M ES PN T +SLL A
Sbjct: 306 ETPNLLNRMA-ESGIKPNEITFTSLLSA-------------------------------- 332
Query: 419 MDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYE 478
Y +G +E +F SM R V+ G +V +LL R Q + Y+
Sbjct: 333 ---YRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIV--------DLLGKAGRIQ-EAYQ 380
Query: 479 DDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYA 535
++P+KP+++ L ++ C EI L+ + + GS D A
Sbjct: 381 FILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVA 437
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 48/284 (16%)
Query: 64 AAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYA-STSVAVANSLVNMYGKCGD 122
+GV P + VL A + L +G +HG++ K G+ V + +LV+MY KCG
Sbjct: 213 GSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGC 272
Query: 123 LAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHA 182
L A VF+ + ++ +W SM T L +
Sbjct: 273 LNNAFSVFELMKVKNVFTWTSM--------------------------ATGLALNGRGNE 306
Query: 183 CSNLRDGLS-LGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVS 241
NL + ++ G + + TF +L++ Y +G ++E LF + V+
Sbjct: 307 TPNLLNRMAESGIKPNEITF----------TSLLSAYRHIGLVEEGIELFKSMKTRFGVT 356
Query: 242 -----WNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEI 296
+ ++ L + R +EA F+ M ++PD + L S ACS G+EI
Sbjct: 357 PVIEHYGCIVDLLGKAGRIQEAYQFILAM---PIKPDAILLRSLCNACSIYGETVMGEEI 413
Query: 297 HGYALRNTDLIDNSFVGSALVD-MYCNCKKADKGRWVFDGILRR 339
G AL + D GS D + + A KG+WV LR+
Sbjct: 414 -GKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRK 456
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 197 bits (501), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 199/404 (49%), Gaps = 36/404 (8%)
Query: 281 LPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRT 340
L CS+ L K+IH +++ +L ++ + L+ + + + VF+ + +
Sbjct: 27 LRTCSNFSQL---KQIHTKIIKH-NLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPS 82
Query: 341 VAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIH 400
WN MI + N EA+ LFI M+ + T ++ AC+ + +H
Sbjct: 83 TFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVH 142
Query: 401 GYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHD 460
G +K GF D + QN LMD+Y + G+ + + +F M R IVSW TM+ G V + D
Sbjct: 143 GLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLD 202
Query: 461 DALNLLHDM-----------------QRGQDDEYE-------DDESIPLKPNSVTLMTVL 496
A + + M R D+ ++ DD +KPN T++ +L
Sbjct: 203 SAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDD----VKPNEFTIVNLL 258
Query: 497 PGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVI 556
+H YA K D +G+ALIDMY+KCG L +R VFD M +++
Sbjct: 259 QASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLA 318
Query: 557 TWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLN 616
TWN +I + G+HG GEEAL LF E + + P+ +T++ + +AC+++G V +GL
Sbjct: 319 TWNSMITSLGVHGCGEEALSLF----EEMEEEASVEPDAITFVGVLSACANTGNVKDGLR 374
Query: 617 LFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSN 660
F M +GI P +H AC++ LL ++ VE+A L+++M S+
Sbjct: 375 YFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSD 418
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 159/355 (44%), Gaps = 57/355 (16%)
Query: 182 ACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNAL-----VTMYAKLGRIDEAKALFGLFDD 236
CSN S KQ+H ++ TN+ L +++ + G A +F
Sbjct: 29 TCSNF----SQLKQIHTKIIKHN----LTNDQLLVRQLISVSSSFGETQYASLVFNQLQS 80
Query: 237 KDLVSWNTVISSLSQNDRFEEA-LLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKE 295
+WN +I SLS N + EA LLF+ M+ + D T + AC +R G +
Sbjct: 81 PSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQ 140
Query: 296 IHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFD---------------GILR-- 338
+HG A++ ++ F + L+D+Y C K D GR VFD G++
Sbjct: 141 VHGLAIK-AGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNS 199
Query: 339 --------------RTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLL 384
R V W AMI Y +N DEA +LF M + D PN T+ +LL
Sbjct: 200 QLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVD-DVKPNEFTIVNLL 258
Query: 385 PACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIV 444
A + + +H Y K GF D ++ AL+DMYS+ G ++ ++ +F M + +
Sbjct: 259 QASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLA 318
Query: 445 SWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
+WN+MIT V G ++AL+L +M+ E P+++T + VL C
Sbjct: 319 TWNSMITSLGVHGCGEEALSLFEEMEEEASVE----------PDAITFVGVLSAC 363
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 120/257 (46%), Gaps = 35/257 (13%)
Query: 70 DNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCG-------- 121
D F FP V+KA + + LG Q+HG K G+ + V N+L+++Y KCG
Sbjct: 118 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFN-DVFFQNTLMDLYFKCGKPDSGRKV 176
Query: 122 -----------------------DLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXX 158
L A VF+++ R+ VSW +MI A +
Sbjct: 177 FDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAF 236
Query: 159 XXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTM 217
+V P FT+V++ A + L LS+G+ VH Y +NG F AL+ M
Sbjct: 237 QLFRRMQVDDVKPNEFTIVNLLQASTQL-GSLSMGRWVHDYAHKNGFVLDCFLGTALIDM 295
Query: 218 YAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEAL-LFLYHMLQSGVRPDGVT 276
Y+K G + +A+ +F + K L +WN++I+SL + EEAL LF ++ V PD +T
Sbjct: 296 YSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAIT 355
Query: 277 LASALPACSHLEMLRTG 293
L AC++ ++ G
Sbjct: 356 FVGVLSACANTGNVKDG 372
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 142/330 (43%), Gaps = 36/330 (10%)
Query: 91 KQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMI-AAAC 149
KQIH + K + + V L+++ G+ A VF+++ +WN MI + +
Sbjct: 37 KQIHTKIIKHNLTNDQLLV-RQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSV 95
Query: 150 RFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWR-T 208
FT + AC + LG QVH + G +
Sbjct: 96 NHKPREALLLFILMMISHQSQFDKFTFPFVIKACL-ASSSIRLGTQVHGLAIKAGFFNDV 154
Query: 209 FTNNALVTMYAKLGRIDEAKALF----------------GLFDD---------------K 237
F N L+ +Y K G+ D + +F GL + +
Sbjct: 155 FFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMR 214
Query: 238 DLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIH 297
++VSW +I++ +N R +EA M V+P+ T+ + L A + L L G+ +H
Sbjct: 215 NVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVH 274
Query: 298 GYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFD 357
YA +N ++D F+G+AL+DMY C R VFD + +++A WN+MI +
Sbjct: 275 DYAHKNGFVLD-CFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCG 333
Query: 358 DEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
+EA+ LF EM E+ P++ T +L AC
Sbjct: 334 EEALSLFEEMEEEASVEPDAITFVGVLSAC 363
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 179 bits (454), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 178/345 (51%), Gaps = 22/345 (6%)
Query: 523 DIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMV 582
D+ +A+I+MY+ C ++ + VF++MP N T V++ + +G GEEA++LF R
Sbjct: 153 DVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFK 212
Query: 583 AEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLG 642
E + +PN + +F+ C+ +G V EG F M +GI PS +HY + +L
Sbjct: 213 EEGN-----KPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLA 267
Query: 643 RSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYV 702
SG ++EA ++ MP VD W +L+ ++H ++E+G+ A+ + L+
Sbjct: 268 TSGHLDEALNFVERMPME-PSVDVWETLMNLSRVHGDVELGDRCAELVEKLDAT------ 320
Query: 703 LLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHE 762
L + S+ + +A D KK E R EP F D+SHPQ ++E
Sbjct: 321 RLDKVSSAGLVATKASDFVKK--EPSTRSEPYF--------YSTFRPVDSSHPQMNIIYE 370
Query: 763 YLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTK 822
L +L ++++ GYVPDT + E + + G+ E +A+ LL + P + I +
Sbjct: 371 TLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLT 430
Query: 823 NLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
N+R+ DCH K +S I R++I RD + +H F+NG C C + W
Sbjct: 431 NIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 160 bits (406), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 181/348 (52%), Gaps = 35/348 (10%)
Query: 529 ALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSN 588
+I+MY+ C + + VF++MP RN TW +I +G+GE A+++F R + E +
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGN-- 205
Query: 589 KEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVE 648
+P++ + A+F AC G ++EGL F +M ++G+ S + Y ++++L G ++
Sbjct: 206 ---KPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLD 262
Query: 649 EAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIY 708
EA ++ M V+ W +L+ C + LE+G+ A+ + L+ + S
Sbjct: 263 EALDFVERMTVE-PSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKE------- 314
Query: 709 SSAGLW-----DQAMDIRKKMKEMG----VRKEPGCSWIEHRDEVHKFLAGDASHPQSKE 759
S+AGL D AM+ K+KE+ +R +P + +H+F AGD SH +
Sbjct: 315 SNAGLVAAKASDSAME---KLKELRYCQMIRDDP-------KKRMHEFRAGDTSHLGTVS 364
Query: 760 LHEYLENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIR 819
+L +M G+VP T V++EEKE L S +LA A ++N+ +
Sbjct: 365 A---FRSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLT 421
Query: 820 VTKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
V +N+R C D H K IS I R +I RD +++H ++NG CSC DYW
Sbjct: 422 VLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 160 bits (405), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 209/466 (44%), Gaps = 96/466 (20%)
Query: 209 FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQS 268
+ N ++ MY K ++ A+ +F + WN +IS + EEA
Sbjct: 137 YVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEA---------- 186
Query: 269 GVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVG-SALVDMYCNCKKAD 327
C +M+ +N V + ++ + K +
Sbjct: 187 ---------------CKLFDMMP----------------ENDVVSWTVMITGFAKVKDLE 215
Query: 328 KGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
R FD + ++V WNAM++GYA+N F ++A++LF +M+ PN TT ++ AC
Sbjct: 216 NARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDML-RLGVRPNETTWVIVISAC 274
Query: 388 --------------------VRCKAFL------------DKEGIHGYVVKRGFEKDKYVQ 415
VR F+ D + + G +++
Sbjct: 275 SFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTW 334
Query: 416 NALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDD 475
NA++ Y+R+G + ++ +F +M +R++VSWN++I GY G+ A+ DM
Sbjct: 335 NAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMI----- 389
Query: 476 EYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYA 535
+Y D KP+ VT+++VL C I Y K ++ + + +LI MYA
Sbjct: 390 DYGDS-----KPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYA 444
Query: 536 KCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNE 595
+ G L ++ VFD+M R+V+++N L A+ +G G E L L +M ++ I P+
Sbjct: 445 RGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKM-----KDEGIEPDR 499
Query: 596 VTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLL 641
VTY ++ AC+ +G++ EG +F +++ P +DHYAC+ DLL
Sbjct: 500 VTYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM-DLL 539
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 174/427 (40%), Gaps = 96/427 (22%)
Query: 330 RWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVR 389
R +FD + V V N+M +++ + ++ ++L+ E P++ + ++ + R
Sbjct: 60 RLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLY-EQRSRCGIMPDAFSFPVVIKSAGR 118
Query: 390 CKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTM 449
V K GF KD YV+N +MDMY + +E ++ +F + +R WN M
Sbjct: 119 FGILF-----QALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVM 173
Query: 450 ITGYVVCGRHDDALNLLHDM---------------------------------------- 469
I+GY G ++A L M
Sbjct: 174 ISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWN 233
Query: 470 -------QRGQDDE----YEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQ 518
Q G ++ + D + ++PN T + V+ C + ++
Sbjct: 234 AMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEK 293
Query: 519 KLATDIAVGSALIDMYAKC--------------------------------GCLNLSRIV 546
++ + V +AL+DM+AKC G ++ +R +
Sbjct: 294 RVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQL 353
Query: 547 FDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACS 606
FD MP RNV++WN LI Y +G+ A+E F M+ DS +P+EVT I++ +AC
Sbjct: 354 FDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDS----KPDEVTMISVLSACG 409
Query: 607 HSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDA 666
H ++ G + ++ N I+ + Y L+ + R G + EA ++ M + V +
Sbjct: 410 HMADLELGDCIVDYIRKNQ-IKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKE--RDVVS 466
Query: 667 WSSLLGA 673
+++L A
Sbjct: 467 YNTLFTA 473
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 147/346 (42%), Gaps = 46/346 (13%)
Query: 113 LVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPT 172
++ + K DL A FDR+ ++ VSWN+M++ + V P
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPN 263
Query: 173 SFTLVSIAHACSNLRD---GLSLGKQVHAYTFR-------------------NGDWRTF- 209
T V + ACS D SL K + R R F
Sbjct: 264 ETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN 323
Query: 210 ---------TNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSLSQNDRFEEALL 260
T NA+++ Y ++G + A+ LF +++VSWN++I+ + N + A+
Sbjct: 324 ELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIE 383
Query: 261 FLYHMLQSG-VRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDM 319
F M+ G +PD VT+ S L AC H+ L G I Y +N +++S S L+ M
Sbjct: 384 FFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRS-LIFM 442
Query: 320 YCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTT 379
Y + + VFD + R V +N + +A N E + L +M E P+ T
Sbjct: 443 YARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEG-IEPDRVT 501
Query: 380 LSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRM 425
+S+L AC R A L KEG +R F K ++N L D Y+ M
Sbjct: 502 YTSVLTACNR--AGLLKEG------QRIF---KSIRNPLADHYACM 536
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 8/234 (3%)
Query: 72 FAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFD 131
F A+L A D+ ++I + ++ N++++ Y + GD++ A +FD
Sbjct: 300 FVKTALLDMHAKCRDIQSARRIFNEL----GTQRNLVTWNAMISGYTRIGDMSSARQLFD 355
Query: 132 RISDRDHVSWNSMIAA-ACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGL 190
+ R+ VSWNS+IA A + P T++S+ AC ++ D L
Sbjct: 356 TMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMAD-L 414
Query: 191 SLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVISSL 249
LG + Y +N +L+ MYA+ G + EAK +F ++D+VS+NT+ ++
Sbjct: 415 ELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAF 474
Query: 250 SQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRN 303
+ N E L L M G+ PD VT S L AC+ +L+ G+ I ++RN
Sbjct: 475 AANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFK-SIRN 527
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 139/367 (37%), Gaps = 65/367 (17%)
Query: 431 SKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSV 490
++ IF S+ ++ N+M + +D L L QR + D S P+ S
Sbjct: 59 TRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYE--QRSRCGIMPDAFSFPVVIKSA 116
Query: 491 TLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQM 550
+L A K D V + ++DMY K + +R VFDQ+
Sbjct: 117 GRFGIL--------------FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQI 162
Query: 551 PTRNVITWNVLIMAYGMHGKGEEALELFRRMV----------------------AEKDSN 588
R WNV+I Y G EEA +LF M A K +
Sbjct: 163 SQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFD 222
Query: 589 KEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVE 648
+ + V++ A+ + + +G ++ L LF+ M G+ P+ + ++
Sbjct: 223 RMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDM-LRLGVRPNETTWVIVISACSFRADPS 281
Query: 649 EAYKLIKTMPSNMKKVDAW--SSLL---GACKIHQNLE--VGEIAAKQLLVLEPNVASHY 701
L+K + +++ + ++LL C+ Q+ E+ ++ LV + S Y
Sbjct: 282 LTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGY 341
Query: 702 VLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELH 761
+ ++ S+ L+D + K SW + +AG A + Q+
Sbjct: 342 TRIGDMSSARQLFDT------------MPKRNVVSW-------NSLIAGYAHNGQAALAI 382
Query: 762 EYLENLL 768
E+ E+++
Sbjct: 383 EFFEDMI 389
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 157 bits (396), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 69/104 (66%), Positives = 83/104 (79%)
Query: 764 LENLLQRMRKEGYVPDTSCVLHDVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVTKN 823
L++L + +R GYVP+T VLHD+D+E KE L HSERLAIAFG++NTPPGTTIRV KN
Sbjct: 136 LKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKN 195
Query: 824 LRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 867
LR+C DCH K +S I DREII+RD +RFHHFR+G CSCGDYW
Sbjct: 196 LRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 128/510 (25%), Positives = 222/510 (43%), Gaps = 58/510 (11%)
Query: 178 SIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDD 236
SI C R LSL V A + G + T N+L+ + RI +A +L G +
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 237 ----KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALP---------- 282
D ++NT+I L +++R EA+ + M+ G +PD VT +
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 283 ACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI----LR 338
A S L+ + GK G + NT ++D CN K + +F + +R
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNT-----------IIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 339 RTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEG 398
V +N++I +A +L +M+ E PN T S+L+ A V+ ++ E
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMI-ERKINPNVVTFSALIDAFVKEGKLVEAEK 347
Query: 399 IHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRD----IVSWNTMITGYV 454
++ ++KR + D + ++L++ + R++ +K +F M +D +V++NT+I G+
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 407
Query: 455 VCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHA 513
R D+ + L +M QRG L N+VT T++ G +
Sbjct: 408 KAKRVDEGMELFREMSQRG------------LVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 514 YALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR----NVITWNVLIMAYGMHG 569
+ + DI S L+D G + + +VF+ + ++ T+N++I G
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Query: 570 KGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEP 629
K E+ +LF + S K ++PN VTY + + G+ +E LF MK G P
Sbjct: 516 KVEDGWDLFCSL-----SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK-EEGPLP 569
Query: 630 SSDHYACLVDLLGRSGRVEEAYKLIKTMPS 659
S Y L+ R G + +LI+ M S
Sbjct: 570 DSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 117/545 (21%), Positives = 241/545 (44%), Gaps = 52/545 (9%)
Query: 254 RFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVG 313
+ ++A+ M++S P V + L A + + + G ++N + N +
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISL-GEQMQNLGISHNLYTY 119
Query: 314 SALVDMYCNCKKADKGRWVFDGILR----RTVAVWNAMIAGYARNEFDDEAIKLFIEMVY 369
S L++ +C + V +++ + N+++ G+ +A+ L +MV
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV- 178
Query: 370 ESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIE 429
E + P+S T ++L+ R + + +V +G + D +++ + G I+
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 430 ISKSIFGSMDRRDI----VSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPL 485
++ S+ M++ I V +NT+I +DALNL +M D++ I
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM---------DNKGI-- 287
Query: 486 KPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRI 545
+PN VT +++ + + +++K+ ++ SALID + K G L +
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 347
Query: 546 VFDQMPTR----NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAI 601
++D+M R ++ T++ LI + MH + +EA +F M++ K+ PN VTY +
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS-----KDCFPNVVTYNTL 402
Query: 602 FAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSN- 660
+ VDEG+ LF M + G+ ++ Y L+ ++ + A + K M S+
Sbjct: 403 IKGFCKAKRVDEGMELFREM-SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 661 -MKKVDAWSSLL-GAC---KIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWD 715
+ + +S LL G C K+ L V E + +EP++ ++ +++ + AG +
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS--KMEPDIYTYNIMIEGM-CKAGKVE 518
Query: 716 QAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEG 775
D+ + GV+ + + + + F K L E + L + M++EG
Sbjct: 519 DGWDLFCSLSLKGVKP----NVVTYTTMMSGFC--------RKGLKEEADALFREMKEEG 566
Query: 776 YVPDT 780
+PD+
Sbjct: 567 PLPDS 571
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/466 (19%), Positives = 191/466 (40%), Gaps = 77/466 (16%)
Query: 55 AISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLV 114
A++ A M+ G PD ++L N ++ + G + + GY S N+L+
Sbjct: 135 ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTF-NTLI 193
Query: 115 NMYGKCGDLAGAHHVFDRISDR----DHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD 170
+ + + A + DR+ + D V++ ++ C+ ++
Sbjct: 194 HGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE 253
Query: 171 PTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKAL 230
P +I A N ++ +++A L
Sbjct: 254 PGVVIYNTIIDALCNYKN-----------------------------------VNDALNL 278
Query: 231 FGLFDDK----DLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH 286
F D+K ++V++N++I L R+ +A L M++ + P+ VT ++ + A
Sbjct: 279 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA--- 335
Query: 287 LEMLRTGKEIHGYALRNTDLIDNS-----FVGSALVDMYCNCKKADKGRWVFDGILRR-- 339
++ GK + L + ++I S F S+L++ +C + D+ + +F+ ++ +
Sbjct: 336 --FVKEGKLVEAEKLYD-EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392
Query: 340 --TVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKE 397
V +N +I G+ + + DE ++LF EM + N+ T ++L+ + + + +
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREM-SQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 398 GIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRR----DIVSWNTMITGY 453
+ +V G D + L+D G++E + +F + R DI ++N MI G
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 454 VVCGRHDDALNLLHDMQ-RGQDDEYEDDESIPLKPNSVTLMTVLPG 498
G+ +D +L + +G +KPN VT T++ G
Sbjct: 512 CKAGKVEDGWDLFCSLSLKG------------VKPNVVTYTTMMSG 545
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/433 (20%), Positives = 174/433 (40%), Gaps = 56/433 (12%)
Query: 55 AISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLV 114
A+S MV G PD+F F + IHG +F+ AS +VA+ + +V
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTL---------------IHG-LFRHNRASEAVALVDRMV 213
Query: 115 NMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSF 174
+ G D V++ ++ C+ ++P
Sbjct: 214 --------VKGCQP--------DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 175 TLVSIAHA-CS--NLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALF 231
+I A C+ N+ D L+L ++ R T N+L+ GR +A L
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN---VVTYNSLIRCLCNYGRWSDASRLL 314
Query: 232 GLFDDK----DLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPA-CSH 286
++ ++V+++ +I + + + EA M++ + PD T +S + C H
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 287 LEMLRTGKEIHGYALR-NTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRR----TV 341
R + H + L + D N + L+ +C K+ D+G +F + +R
Sbjct: 375 ---DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 342 AVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHG 401
+ +I G+ + D A +F +MV + P+ T S LL +
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDG-VLPDIMTYSILLDGLCNNGKVETALVVFE 490
Query: 402 YVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD----RRDIVSWNTMITGYVVCG 457
Y+ + E D Y N +++ + G++E +F S+ + ++V++ TM++G+ G
Sbjct: 491 YLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 550
Query: 458 RHDDALNLLHDMQ 470
++A L +M+
Sbjct: 551 LKEEADALFREMK 563
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 169/730 (23%), Positives = 287/730 (39%), Gaps = 88/730 (12%)
Query: 36 PSAW--IDHLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQI 93
P+A+ I + +S + A+ T+ M G+ P+ A A L + A KQI
Sbjct: 431 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 490
Query: 94 HGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDR----DHVSWNSMIAAAC 149
+ G SV N ++ Y K G++ A + + + D + NS+I
Sbjct: 491 FYGLKDIGLVPDSVTY-NMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLY 549
Query: 150 RFXXXXXXXXXXXXXXXXNVDPTSFT---LVSIAHACSNLRDGLSLGKQVHAYTFRNGDW 206
+ + PT T L++ +++ + L +
Sbjct: 550 KADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL---FEGMVQKGCPP 606
Query: 207 RTFTNNALVTMYAKLGRIDEA-KALFGLFD---DKDLVSWNTVISSLSQNDRFEEALLFL 262
T T N L K + A K LF + D D+ ++NT+I L +N + +EA+ F
Sbjct: 607 NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCF- 665
Query: 263 YHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRN-----TDLIDNSFVGSALV 317
+H ++ V PD VTL + LP ++ +I L N +L +GS L
Sbjct: 666 FHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILA 725
Query: 318 DMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNS 377
+ + + R V +GI R ++ +I ++ A LF + + P
Sbjct: 726 EAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKL 785
Query: 378 TTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGS 437
T + L+ + + + V G D N L+D Y + G+I+ ++
Sbjct: 786 PTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKE 845
Query: 438 MDRRD----IVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLM 493
M + ++ N +I+G V G DDAL+L +D+ +D P + T
Sbjct: 846 MSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD----------FSPTACTY- 894
Query: 494 TVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR 553
LID +K G L ++ +F+ M
Sbjct: 895 ----------------------------------GPLIDGLSKSGRLYEAKQLFEGMLDY 920
Query: 554 ----NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSG 609
N +N+LI +G G+ + A LF+RMV E +RP+ TY + G
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG-----VRPDLKTYSVLVDCLCMVG 975
Query: 610 MVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSN---MKKVDA 666
VDEGL+ F +K + G+ P Y +++ LG+S R+EEA L M ++ +
Sbjct: 976 RVDEGLHYFKELKES-GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYT 1034
Query: 667 WSSLLGACKIHQNL-EVGEIAAK-QLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKM 724
++SL+ I + E G+I + Q LEPNV + L+ YS +G + A + + M
Sbjct: 1035 YNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG-YSLSGKPEHAYAVYQTM 1093
Query: 725 KEMGVRKEPG 734
G G
Sbjct: 1094 VTGGFSPNTG 1103
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 154/706 (21%), Positives = 273/706 (38%), Gaps = 113/706 (16%)
Query: 69 PDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHH 128
PD + +L + DL+ KQ + K G+ V LV+ K G+ A
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP-DVVTFTILVDALCKAGNFGEAFD 384
Query: 129 VFDRISDRDHV----SWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACS 184
D + D+ + ++N++I R V PT++T +
Sbjct: 385 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG 444
Query: 185 NLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALF-GLFDD---KDLV 240
D +S + + NA + AK GR EAK +F GL D D V
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504
Query: 241 SWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYA 300
++N ++ S+ +EA+ L M+++G PD + + S +
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT----------------- 547
Query: 301 LRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEA 360
L D +D ++ M+ K+ L+ TV +N ++AG +N EA
Sbjct: 548 LYKADRVDEAW------KMFMRMKEMK---------LKPTVVTYNTLLAGLGKNGKIQEA 592
Query: 361 IKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMD 420
I+LF MV + PN+ T ++L + + ++ G D + N ++
Sbjct: 593 IELFEGMV-QKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Query: 421 MYSRMGRIEISKSIFGSMDR---RDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDE- 476
+ G+++ + F M + D V+ T++ G V +DA ++ + D+
Sbjct: 652 GLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQP 711
Query: 477 ----YED-----------DESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIH-----AYAL 516
+ED D ++ V G H A L
Sbjct: 712 ANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTL 771
Query: 517 KQKLATDIAVG------SALIDMYAKCGCLNLSRIVFDQMPTR----NVITWNVLIMAYG 566
+K D+ V + LI + + +++ VF Q+ + +V T+N L+ AYG
Sbjct: 772 FEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYG 831
Query: 567 MHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHG 626
GK +E EL++ M S E N +T+ + + +G VD+ L+L++ + ++
Sbjct: 832 KSGKIDELFELYKEM-----STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 886
Query: 627 IEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIA 686
P++ Y L+D L +SGR+ EA +L + M L+ G
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGM----------------------LDYG--- 921
Query: 687 AKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKE 732
PN A + +L+ N + AG D A + K+M + GVR +
Sbjct: 922 ------CRPNCAIYNILI-NGFGKAGEADAACALFKRMVKEGVRPD 960
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 102/480 (21%), Positives = 179/480 (37%), Gaps = 105/480 (21%)
Query: 344 WNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYV 403
+N +I ++ F EA++++ M+ E F P+ T SSL+ + + G+ +
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEG-FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 404 VKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRR----DIVSWNTMITGYVVCGRH 459
G + + Y + + R G+I + I MD D+V++ +I +
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309
Query: 460 DDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQK 519
D A + M+ G+ KP+ VT +T+L + + K
Sbjct: 310 DCAKEVFEKMKTGRH-----------KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Query: 520 LATDIAVGSALIDMYAK------------------------------CGCLNLSRI---- 545
D+ + L+D K CG L + R+
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 546 -VFDQMPTRNV----ITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIA 600
+F M + V T+ V I YG G ALE F +M K I PN V A
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM-----KTKGIAPNIVACNA 473
Query: 601 IFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSN 660
+ + +G E +F+ +K + G+ P S Y ++ + G ++EA KL+ M N
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLK-DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 532
Query: 661 MKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDI 720
C EP+V L++ +Y A D+A +
Sbjct: 533 ------------GC-------------------EPDVIVVNSLINTLY-KADRVDEAWKM 560
Query: 721 RKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDT 780
+MKEM ++ + + + + LAG + + +E E E ++Q+ G P+T
Sbjct: 561 FMRMKEMKLKP----TVVTY----NTLLAGLGKNGKIQEAIELFEGMVQK----GCPPNT 608
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/479 (20%), Positives = 186/479 (38%), Gaps = 76/479 (15%)
Query: 186 LRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDK----DLVS 241
L++ +LG + + YTF + + + G+I+EA + DD+ D+V+
Sbjct: 246 LKEMETLGLKPNVYTF----------TICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 295
Query: 242 WNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYAL 301
+ +I +L + + A M +PD VT + L S L + K+
Sbjct: 296 YTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEME 355
Query: 302 RNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAI 361
++ + D + LVD C AG FD
Sbjct: 356 KDGHVPD-VVTFTILVDALCK--------------------------AGNFGEAFDT--- 385
Query: 362 KLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDM 421
++++ + PN T ++L+ +R D + G + G + Y +D
Sbjct: 386 ---LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDY 442
Query: 422 YSRMGRIEISKSIFGSMDRR----DIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEY 477
Y + G + F M + +IV+ N + GR +A + + ++
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLK------- 495
Query: 478 EDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKC 537
I L P+SVT ++ ++ + ++ D+ V ++LI+ K
Sbjct: 496 ----DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKA 551
Query: 538 GCLNLSRIVFDQM------PTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEI 591
++ + +F +M PT V+T+N L+ G +GK +EA+ELF MV K
Sbjct: 552 DRVDEAWKMFMRMKEMKLKPT--VVTYNTLLAGLGKNGKIQEAIELFEGMV-----QKGC 604
Query: 592 RPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEA 650
PN +T+ +F + V L + M + G P Y ++ L ++G+V+EA
Sbjct: 605 PPNTITFNTLFDCLCKNDEVTLALKMLFKM-MDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 214/477 (44%), Gaps = 57/477 (11%)
Query: 210 TNNALVTMYAKLGRIDEAKAL----FGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHM 265
T ++L+ Y RI EA AL F + + V++NT+I L +++ EA+ + M
Sbjct: 152 TLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRM 211
Query: 266 LQSGVRPDGVTLASALP----------ACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSA 315
+ G +PD T + + A S L+ + GK D++ + +
Sbjct: 212 VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK-------IEADVV----IYTT 260
Query: 316 LVDMYCNCKKADKGRWVFDGI----LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYES 371
++D CN K + +F + +R V +N++I +A +L +M+ E
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI-ER 319
Query: 372 DFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEIS 431
PN T S+L+ A V+ ++ E ++ ++KR + D + ++L++ + R++ +
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 432 KSIFGSMDRRD----IVSWNTMITGYVVCGRHDDALNLLHDM-QRGQDDEYEDDESIPLK 486
K +F M +D +V++NT+I G+ R ++ + L +M QRG L
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG------------LV 427
Query: 487 PNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIV 546
N+VT T++ G +I + + DI S L+D K G L + +V
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487
Query: 547 FDQMPTR----NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIF 602
F+ + ++ T+N++I GK E+ +LF + S K ++PN + Y +
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-----SLKGVKPNVIIYTTMI 542
Query: 603 AACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPS 659
+ G+ +E LF MK + G P+S Y L+ R G + +LIK M S
Sbjct: 543 SGFCRKGLKEEADALFREMKED-GTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 150/383 (39%), Gaps = 50/383 (13%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+A++ MVA G PD F + V+ D++L + + K G V + ++
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK-GKIEADVVIYTTI 261
Query: 114 VNMYGKCGDLAGAHHVFDRISDR----DHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNV 169
++ ++ A ++F + ++ + V++NS+I C + +
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Query: 170 DPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKA 229
+P T ++ A + K R+ D FT ++L+ + R+DEAK
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 230 LFGLFDDKD----LVSWNTVISSLSQNDRFEEALLFLYHMLQ------------------ 267
+F L KD +V++NT+I + R EE + M Q
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 268 -----------------SGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNS 310
GV PD +T + L L + Y L+ + + +
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY-LQKSKMEPDI 500
Query: 311 FVGSALVDMYCNCKKADKGRWVFDGI----LRRTVAVWNAMIAGYARNEFDDEAIKLFIE 366
+ + +++ C K + G +F + ++ V ++ MI+G+ R +EA LF E
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Query: 367 MVYESDFTPNSTTLSSLLPACVR 389
M E PNS T ++L+ A +R
Sbjct: 561 M-KEDGTLPNSGTYNTLIRARLR 582
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 180/438 (41%), Gaps = 51/438 (11%)
Query: 358 DEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNA 417
D+A+ LF EMV +S P+ + LL A + F + + D Y N
Sbjct: 62 DDAVDLFGEMV-QSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 418 LMDMYSRMGRIEISKSIFGSMDR----RDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQ 473
L++ + R ++ ++ ++ G M + DIV+ ++++ GY R +A+ L+ M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF--- 177
Query: 474 DDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDM 533
+ +PN+VT T++ G + + + D+ +++
Sbjct: 178 --------VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 229
Query: 534 YAKCGCLNLSRIVFDQMPT----RNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNK 589
K G ++L+ + +M +V+ + +I A + +AL LF M NK
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM-----DNK 284
Query: 590 EIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEE 649
IRPN VTY ++ + G + L M I P+ ++ L+D + G++ E
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM-IERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 650 AYKLIKTMPSNMKKVD--AWSSLLGACKIHQNLEVGEIAAKQLLVLE------PNVASHY 701
A KL M D +SSL+ +H L+ AK + L PNV ++
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD----EAKHMFELMISKDCFPNVVTYN 399
Query: 702 VLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELH 761
L+ + A ++ M++ ++M + G+ G + + F AGD Q
Sbjct: 400 TLIKG-FCKAKRVEEGMELFREMSQRGL---VGNTVTYNTLIQGLFQAGDCDMAQ----- 450
Query: 762 EYLENLLQRMRKEGYVPD 779
+ ++M +G PD
Sbjct: 451 ----KIFKKMVSDGVPPD 464
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 211/507 (41%), Gaps = 92/507 (18%)
Query: 215 VTMYAKLGRIDEAKALFGLFDD----KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGV 270
+ + K G+++EA LF ++ ++V++NTVI L R++EA +F M++ G+
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 271 RPDGVTLASALPACSHLEMLRTGKEIHGYA-LRNTDLIDNSFVGSALVDMYCNCKKADKG 329
P +T + + + + R G + N V + L+D + +K
Sbjct: 327 EPTLITYSILVKGLTRAK--RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 384
Query: 330 RWVFDGILRR----TVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLP 385
+ D ++ + T + +N +I GY +N D A +L EM+ F N + +S++
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML-SIGFNVNQGSFTSVI- 442
Query: 386 ACVRCKAF------------------------------LDKEGIHGYVVK-------RGF 408
C+ C L K G H ++ +GF
Sbjct: 443 -CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
Query: 409 EKDKYVQNALMDMYSRMGRIE----ISKSIFGSMDRRDIVSWNTMITGYVVCGRH--DDA 462
D NAL+ G+++ I K I G D VS+NT+I+G CG+ D+A
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG--CCGKKKLDEA 559
Query: 463 LNLLHDM-QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLA 521
L +M +RG LKP++ T ++ G + + +
Sbjct: 560 FMFLDEMVKRG------------LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML 607
Query: 522 TDIAVGSALIDMYAKCGCLNLSRI-----VFDQMPTRNV----ITWNVLIMAYGMHGKGE 572
D+ S +ID GC R FD+M ++NV + +N LI AY G+
Sbjct: 608 PDVYTYSVMID-----GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 573 EALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSD 632
ALEL M +K I PN TY ++ S V+E LF M+ G+EP+
Sbjct: 663 MALELREDM-----KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM-EGLEPNVF 716
Query: 633 HYACLVDLLGRSGRVEEAYKLIKTMPS 659
HY L+D G+ G++ + L++ M S
Sbjct: 717 HYTALIDGYGKLGQMVKVECLLREMHS 743
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 190/433 (43%), Gaps = 35/433 (8%)
Query: 62 MVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCG 121
M G PP+ + ++ + LN +I + G + TS + N+L+ Y K G
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS-STYNTLIKGYCKNG 414
Query: 122 DLAGAHHVFDRI----SDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLV 177
A + + + + S+ S+I C N+ P L
Sbjct: 415 QADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT 474
Query: 178 S-IAHACSNLRDGLSLGKQVHA----YTFRNGDW--RTFTNNALVTMYAKLGRIDEA--- 227
+ I+ C + GK A + F N + T T+NAL+ + G++DEA
Sbjct: 475 TLISGLCKH-------GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 228 -KALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH 286
K + G D VS+NT+IS + +EA +FL M++ G++PD T ++ C
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY--SILICGL 585
Query: 287 LEMLRTGKEIHGY-ALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTV---- 341
M + + I + + ++ + + S ++D C ++ ++G+ FD ++ + V
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 342 AVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHG 401
V+N +I Y R+ A++L +M ++ +PNS T +SL+ + + +
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKG-ISPNSATYTSLIKGMSIISRVEEAKLLFE 704
Query: 402 YVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDI----VSWNTMITGYVVCG 457
+ G E + + AL+D Y ++G++ + + M +++ +++ MI GY G
Sbjct: 705 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 764
Query: 458 RHDDALNLLHDMQ 470
+A LL++M+
Sbjct: 765 NVTEASRLLNEMR 777
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 128/290 (44%), Gaps = 32/290 (11%)
Query: 375 PNSTTLSSLLPACVRCKAFLDKEGIHGY-VVKRGFEKDKYVQNALMDMYSRMGRIEISKS 433
P+ TT + LL + VR F ++ + VV +G D Y+ ++ + + G++E +
Sbjct: 224 PSKTTCNILLTSLVRANEF--QKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVK 281
Query: 434 IFGSMDRR----DIVSWNTMITGYVVCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKPN 488
+F M+ ++V++NT+I G +CGR+D+A M +RG ++P
Sbjct: 282 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG------------MEPT 329
Query: 489 SVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFD 548
+T ++ G + K+ ++ V + LID + + G LN + + D
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 549 QMPTRNV----ITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFA- 603
M ++ + T+N LI Y +G+ + A L + M++ N+ ++ ++
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG-----FNVNQGSFTSVICL 444
Query: 604 ACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKL 653
CSH M D L M + + P L+ L + G+ +A +L
Sbjct: 445 LCSHL-MFDSALRFVGEMLLRN-MSPGGGLLTTLISGLCKHGKHSKALEL 492
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 211/507 (41%), Gaps = 92/507 (18%)
Query: 215 VTMYAKLGRIDEAKALFGLFDD----KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGV 270
+ + K G+++EA LF ++ ++V++NTVI L R++EA +F M++ G+
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 271 RPDGVTLASALPACSHLEMLRTGKEIHGYA-LRNTDLIDNSFVGSALVDMYCNCKKADKG 329
P +T + + + + R G + N V + L+D + +K
Sbjct: 327 EPTLITYSILVKGLTRAK--RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 384
Query: 330 RWVFDGILRR----TVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLP 385
+ D ++ + T + +N +I GY +N D A +L EM+ F N + +S++
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML-SIGFNVNQGSFTSVI- 442
Query: 386 ACVRCKAF------------------------------LDKEGIHGYVVK-------RGF 408
C+ C L K G H ++ +GF
Sbjct: 443 -CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
Query: 409 EKDKYVQNALMDMYSRMGRIE----ISKSIFGSMDRRDIVSWNTMITGYVVCGRH--DDA 462
D NAL+ G+++ I K I G D VS+NT+I+G CG+ D+A
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG--CCGKKKLDEA 559
Query: 463 LNLLHDM-QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLA 521
L +M +RG LKP++ T ++ G + + +
Sbjct: 560 FMFLDEMVKRG------------LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML 607
Query: 522 TDIAVGSALIDMYAKCGCLNLSRI-----VFDQMPTRNV----ITWNVLIMAYGMHGKGE 572
D+ S +ID GC R FD+M ++NV + +N LI AY G+
Sbjct: 608 PDVYTYSVMID-----GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 573 EALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSD 632
ALEL M +K I PN TY ++ S V+E LF M+ G+EP+
Sbjct: 663 MALELREDM-----KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM-EGLEPNVF 716
Query: 633 HYACLVDLLGRSGRVEEAYKLIKTMPS 659
HY L+D G+ G++ + L++ M S
Sbjct: 717 HYTALIDGYGKLGQMVKVECLLREMHS 743
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 190/433 (43%), Gaps = 35/433 (8%)
Query: 62 MVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCG 121
M G PP+ + ++ + LN +I + G + TS + N+L+ Y K G
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS-STYNTLIKGYCKNG 414
Query: 122 DLAGAHHVFDRI----SDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLV 177
A + + + + S+ S+I C N+ P L
Sbjct: 415 QADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT 474
Query: 178 S-IAHACSNLRDGLSLGKQVHA----YTFRNGDW--RTFTNNALVTMYAKLGRIDEA--- 227
+ I+ C + GK A + F N + T T+NAL+ + G++DEA
Sbjct: 475 TLISGLCKH-------GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 228 -KALFGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH 286
K + G D VS+NT+IS + +EA +FL M++ G++PD T ++ C
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY--SILICGL 585
Query: 287 LEMLRTGKEIHGY-ALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTV---- 341
M + + I + + ++ + + S ++D C ++ ++G+ FD ++ + V
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 342 AVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHG 401
V+N +I Y R+ A++L +M ++ +PNS T +SL+ + + +
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKG-ISPNSATYTSLIKGMSIISRVEEAKLLFE 704
Query: 402 YVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDI----VSWNTMITGYVVCG 457
+ G E + + AL+D Y ++G++ + + M +++ +++ MI GY G
Sbjct: 705 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 764
Query: 458 RHDDALNLLHDMQ 470
+A LL++M+
Sbjct: 765 NVTEASRLLNEMR 777
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 128/290 (44%), Gaps = 32/290 (11%)
Query: 375 PNSTTLSSLLPACVRCKAFLDKEGIHGY-VVKRGFEKDKYVQNALMDMYSRMGRIEISKS 433
P+ TT + LL + VR F ++ + VV +G D Y+ ++ + + G++E +
Sbjct: 224 PSKTTCNILLTSLVRANEF--QKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVK 281
Query: 434 IFGSMDRR----DIVSWNTMITGYVVCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKPN 488
+F M+ ++V++NT+I G +CGR+D+A M +RG ++P
Sbjct: 282 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG------------MEPT 329
Query: 489 SVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFD 548
+T ++ G + K+ ++ V + LID + + G LN + + D
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 549 QMPTRNV----ITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFA- 603
M ++ + T+N LI Y +G+ + A L + M++ N+ ++ ++
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG-----FNVNQGSFTSVICL 444
Query: 604 ACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKL 653
CSH M D L M + + P L+ L + G+ +A +L
Sbjct: 445 LCSHL-MFDSALRFVGEMLLRN-MSPGGGLLTTLISGLCKHGKHSKALEL 492
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 196/469 (41%), Gaps = 62/469 (13%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+A + M G+ PD A+ ++ L +G ++ G V V +S
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG-VKLDVVVFSST 362
Query: 114 VNMYGKCGDLAGAHHVFDRI----SDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNV 169
+++Y K GDLA A V+ R+ + V++ +I C+ +
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
Query: 170 DPTSFTLVSIAHA---CSNLRDGLSL--------------------------GKQVHAYT 200
+P+ T S+ C NLR G +L G +HA
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482
Query: 201 F------RNGDWRTFTNNALVTMYAKLGRIDEAKALF---GLFDDK-DLVSWNTVISSLS 250
F ++ N+L+ + +L R DEA +F G++ K D+ ++ TV+
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI 542
Query: 251 QNDRFEEALLFLYHMLQSGVRPDGVTLASALPA-CSHLEMLRTGKEIHGYALRNTDLIDN 309
R EEAL + M + G+ PD + + + A C H++ G ++ RN D
Sbjct: 543 MEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP-TIGLQLFDLMQRNKISADI 601
Query: 310 SFVGSALVDMYCNCKKADKGRWVF----DGILRRTVAVWNAMIAGYARNEFDDEAIKLFI 365
+ V + ++ + C + + F +G + + +N MI GY DEA ++F
Sbjct: 602 A-VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF- 659
Query: 366 EMVYESDFTPNSTTLSSLLPACVRCKAFLDKEG---IHGYVVKRGFEKDKYVQNALMDMY 422
E++ + F PN+ TL+ L+ V CK D +G + + ++G + + LMD +
Sbjct: 660 ELLKVTPFGPNTVTLTILIH--VLCKNN-DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 716
Query: 423 SRMGRIEISKSIFGSMDRR----DIVSWNTMITGYVVCGRHDDALNLLH 467
S+ IE S +F M + IVS++ +I G GR D+A N+ H
Sbjct: 717 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFH 765
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 117/555 (21%), Positives = 233/555 (41%), Gaps = 55/555 (9%)
Query: 223 RIDEAKALFGLFDD----KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLA 278
+I+ A L L D ++V++ T+I+ + + A M Q G+ PD + +
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 279 SALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILR 338
+ + ML G ++ AL +D V S+ +D+Y V+ +L
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLD-VVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 339 R----TVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFL 394
+ V + +I G ++ EA ++ +++ + P+ T SSL+ +C
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL-KRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 395 DKEGIHGYVVKRGFEKDKYVQNALMDMYSRMG----RIEISKSIFGSMDRRDIVSWNTMI 450
++ ++K G+ D + L+D S+ G + S + G R ++V +N++I
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 451 TGYVVCGRHDDALNLLHDM---------------QRGQDDEYEDDESI---------PLK 486
G+ R D+AL + M R E +E++ L+
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563
Query: 487 PNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIV 546
P+++ T++ ++ + K++ DIAV + +I + KC + +
Sbjct: 564 PDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 623
Query: 547 FDQMPT----RNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTY-IAI 601
F+ + +++T+N +I Y + +EA +F + PN VT I I
Sbjct: 624 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV-----TPFGPNTVTLTILI 678
Query: 602 FAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSN- 660
C ++ M D + +F M A G +P++ Y CL+D +S +E ++KL + M
Sbjct: 679 HVLCKNNDM-DGAIRMFSIM-AEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 736
Query: 661 -MKKVDAWSSLL-GACKIHQNLEVGEIAAKQL-LVLEPNVASHYVLLSNIYSSAGLWDQA 717
+ ++S ++ G CK + E I + + L P+V ++ +L+ Y G +A
Sbjct: 737 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG-YCKVGRLVEA 795
Query: 718 MDIRKKMKEMGVRKE 732
+ + M GV+ +
Sbjct: 796 ALLYEHMLRNGVKPD 810
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 172/373 (46%), Gaps = 36/373 (9%)
Query: 375 PNSTTLSSLLPACVRCKAFLDKE-GIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKS 433
P+ + + + CK + K H V++RGF N ++ S + +IE++
Sbjct: 214 PSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASR 272
Query: 434 IFGSM----DRRDIVSWNTMITGYVVCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKPN 488
+ + ++V++ T+I G+ G D A +L M QRG ++P+
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG------------IEPD 320
Query: 489 SVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFD 548
+ T++ G ++ + AL + + D+ V S+ ID+Y K G L + +V+
Sbjct: 321 LIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYK 380
Query: 549 QMPTR----NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAA 604
+M + NV+T+ +LI G+ EA ++ +++ + + P+ VTY ++
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL-----KRGMEPSIVTYSSLIDG 435
Query: 605 CSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKL-IKTMPSNMK- 662
G + G L+ M G P Y LVD L + G + A + +K + +++
Sbjct: 436 FCKCGNLRSGFALYEDM-IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 663 KVDAWSSLL-GACKIHQNLEVGEI-AAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDI 720
V ++SL+ G C++++ E ++ + ++P+VA+ + + + G ++A+ +
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT-FTTVMRVSIMEGRLEEALFL 553
Query: 721 RKKMKEMGVRKEP 733
+M +MG+ EP
Sbjct: 554 FFRMFKMGL--EP 564
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 123/510 (24%), Positives = 221/510 (43%), Gaps = 58/510 (11%)
Query: 178 SIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDD 236
SI C R LSL V A + G + T ++L+ Y RI +A AL +
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 237 ----KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALP---------- 282
D ++ T+I L +++ EA+ + M+Q G +PD VT + +
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 283 ACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI----LR 338
A S L+ + GK + NT ++D C K D +F + +R
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNT-----------IIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 339 RTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEG 398
V ++++I+ +A +L +M+ E PN T S+L+ A V+ ++ E
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMI-ERKINPNVVTFSALIDAFVKEGKLVEAEK 349
Query: 399 IHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRD----IVSWNTMITGYV 454
++ ++KR + D + ++L++ + R++ +K +F M +D +V+++T+I G+
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
Query: 455 VCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHA 513
R ++ + L +M QRG L N+VT T++ G +
Sbjct: 410 KAKRVEEGMELFREMSQRG------------LVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 514 YALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR----NVITWNVLIMAYGMHG 569
+ + +I + L+D K G L + +VF+ + ++ T+N++I G
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517
Query: 570 KGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEP 629
K E+ ELF + S K + PN + Y + + G +E +L MK + G P
Sbjct: 518 KVEDGWELFCNL-----SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED-GPLP 571
Query: 630 SSDHYACLVDLLGRSGRVEEAYKLIKTMPS 659
+S Y L+ R G E + +LIK M S
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRS 601
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/458 (19%), Positives = 177/458 (38%), Gaps = 65/458 (14%)
Query: 55 AISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLV 114
A++ MV G PD F F ++ N + + + + G + ++V
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVV 230
Query: 115 NMYGKCGDLAGAHHVFDRIS----DRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD 170
N K GD+ A + ++ + D V +N++I C++ +
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 171 PTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKAL 230
P FT S+ N + + R + T +AL+ + K G++ EA+ L
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 231 FGLF----DDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH 286
+ D D+ +++++I+ +DR +EA M+ P+ VT
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY--------- 401
Query: 287 LEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRR----TVA 342
S L+ +C K+ ++G +F + +R
Sbjct: 402 ---------------------------STLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 343 VWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGY 402
+ +I G+ + D A +F +MV PN T + LL + + Y
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMV-SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 403 VVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRR----DIVSWNTMITGYVVCGR 458
+ + E D Y N +++ + G++E +F ++ + +++++NTMI+G+ G
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Query: 459 HDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVL 496
++A +LL M+ E PL PNS T T++
Sbjct: 554 KEEADSLLKKMK----------EDGPL-PNSGTYNTLI 580
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 125/512 (24%), Positives = 219/512 (42%), Gaps = 62/512 (12%)
Query: 178 SIAHACSNLRDGLSLGKQVHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKAL----FG 232
SI C R L L V + G + T ++L+ Y RI EA AL F
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 233 LFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALP---------- 282
+ V++NT+I L +++ EA+ + M+ G +PD VT +
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 283 ACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI----LR 338
A + L + GK G + NT ++D C K D +F + +R
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNT-----------IIDGLCKYKHMDDALNLFKEMETKGIR 288
Query: 339 RTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEG 398
V ++++I+ +A +L +M+ E P+ T S+L+ A V+ ++ E
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 399 IHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRR----DIVSWNTMITGYV 454
++ +VKR + ++L++ + R++ +K +F M + D+V++NT+I G+
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
Query: 455 VCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHA 513
R ++ + + +M QRG L N+VT ++ G EI
Sbjct: 408 KYKRVEEGMEVFREMSQRG------------LVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Query: 514 YALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQM------PTRNVITWNVLIMAYGM 567
+ + +I + L+D K G L + +VF+ + PT + T+N++I
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT--IYTYNIMIEGMCK 513
Query: 568 HGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGI 627
GK E+ +LF + S K ++P+ V Y + + G +E LF MK + G
Sbjct: 514 AGKVEDGWDLFCNL-----SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED-GT 567
Query: 628 EPSSDHYACLVDLLGRSGRVEEAYKLIKTMPS 659
P+S Y L+ R G E + +LIK M S
Sbjct: 568 LPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/478 (18%), Positives = 192/478 (40%), Gaps = 60/478 (12%)
Query: 47 AQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTS 106
A+ + F IS M G+P +++ + ++ + L L + G + K GY
Sbjct: 92 AKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNI 151
Query: 107 VAVANSLVNMYGKCGDLAGAHHVFDRI----SDRDHVSWNSMIAAACRFXXXXXXXXXXX 162
V ++ SL+N Y ++ A + D++ + V++N++I
Sbjct: 152 VTLS-SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALID 210
Query: 163 XXXXXNVDPTSFTLVSIAHACSNLRD---GLSLGKQVHAYTFRNGDWRTFTNNALVTMYA 219
P T + + D +L ++ G N ++
Sbjct: 211 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPG---VLIYNTIIDGLC 267
Query: 220 KLGRIDEAKALFGLFDDK----DLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGV 275
K +D+A LF + K ++V+++++IS L R+ +A L M++ + PD
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327
Query: 276 TLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVG-SALVDMYCNCKKADKGRWVFD 334
T ++ + A L ++++ ++ + ID S V S+L++ +C + D+ + +F+
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRS--IDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 335 GILRR----TVAVWNAMIAGYARNEFDDEAIKLFIEM----------------------- 367
++ + V +N +I G+ + + +E +++F EM
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 368 -----------VYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQN 416
+ PN T ++LL + + Y+ + E Y N
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 417 ALMDMYSRMGRIEISKSIFGSMD----RRDIVSWNTMITGYVVCGRHDDALNLLHDMQ 470
+++ + G++E +F ++ + D+V++NTMI+G+ G ++A L +M+
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 118/495 (23%), Positives = 213/495 (43%), Gaps = 59/495 (11%)
Query: 194 KQVHAYTFRNGDWR------TFTNNALVTMYAKLGRIDEAKALFG----LFDDKDLVSWN 243
K + A++ W+ T T + LV + GR+ EA AL + DLV+ +
Sbjct: 120 KLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVS 179
Query: 244 TVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASAL-------PACSHLEMLRTGKEI 296
T+I+ L R EAL+ + M++ G +PD VT L + L++ R +E
Sbjct: 180 TLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE- 238
Query: 297 HGYALRNTDLIDNSFVG-SALVDMYCNCKKADKGRWVFDGI----LRRTVAVWNAMIAGY 351
RN I S V S ++D C D +F+ + ++ V ++++I G
Sbjct: 239 -----RN---IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 352 ARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKD 411
+ D+ K+ EM+ + P+ T S+L+ V+ L+ + ++ ++ RG D
Sbjct: 291 CNDGKWDDGAKMLREMI-GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 412 KYVQNALMDMYSRMGRIEISKSIFGSMDRR----DIVSWNTMITGYVVCGRHDDALNLLH 467
N+L+D + + + + +F M + DIV+++ +I Y R DD + L
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 468 DMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVG 527
++ S L PN++T T++ G E+ + + + +
Sbjct: 410 EIS-----------SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Query: 528 SALIDMYAKCGCLNLSRIVFDQMP----TRNVITWNVLIMAYGMHGKGEEALELFRRMVA 583
L+D G LN + +F++M T + +N++I K ++A LF +
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSL-- 516
Query: 584 EKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDL-LG 642
S+K ++P+ VTY + G + E LF MK + G P Y L+ LG
Sbjct: 517 ---SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED-GCTPDDFTYNILIRAHLG 572
Query: 643 RSGRVEEAYKLIKTM 657
SG + + +LI+ M
Sbjct: 573 GSGLI-SSVELIEEM 586
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 169/386 (43%), Gaps = 35/386 (9%)
Query: 358 DEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNA 417
++AI LF M+ +S P + L A R K + G + G E D Y
Sbjct: 52 NDAIDLFESMI-QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 418 LMDMYSRMGRIEISKSIFGSMDR----RDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQ 473
+++ Y R ++ + S+ G + D ++++T++ G+ + GR +A+ L+ M +
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 474 DDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDM 533
+P+ VT+ T++ G + ++ D +++
Sbjct: 171 Q-----------RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 534 YAKCGCLNLSRIVFDQMPTRN----VITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNK 589
K G L+ +F +M RN V+ ++++I + G ++AL LF M K
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM-----EMK 274
Query: 590 EIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEE 649
I+ + VTY ++ + G D+G + M I P ++ L+D+ + G++ E
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREM-IGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 650 AYKLIKTMPSNMKKVD--AWSSLL-GACK---IHQNLEVGEIAAKQLLVLEPNVASHYVL 703
A +L M + D ++SL+ G CK +H+ ++ ++ + EP++ ++ +L
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK--GCEPDIVTYSIL 391
Query: 704 LSNIYSSAGLWDQAMDIRKKMKEMGV 729
+ N Y A D M + +++ G+
Sbjct: 392 I-NSYCKAKRVDDGMRLFREISSKGL 416
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 110/506 (21%), Positives = 221/506 (43%), Gaps = 41/506 (8%)
Query: 210 TNNALVTMYAKLGRIDEAKALFGLFD----DKDLVSWNTVISSLSQNDRFEEALLFLYHM 265
T NAL+ +Y K R EA + +V++N++IS+ +++ +EA+ M
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375
Query: 266 LQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKK 325
+ G +PD T + L + + I +RN N +A + MY N K
Sbjct: 376 AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE-EMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 326 ADKGRWVFDGI----LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLS 381
+ +FD I L + WN ++A + +N D E +F EM + F P T +
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM-KRAGFVPERETFN 493
Query: 382 SLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD-- 439
+L+ A RC +F ++ ++ G D N ++ +R G E S+ + M+
Sbjct: 494 TLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDG 553
Query: 440 --RRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLP 497
+ + +++ +++ Y + + L+H + E+ S ++P +V L T++
Sbjct: 554 RCKPNELTYCSLLHAYA----NGKEIGLMHSLA-------EEVYSGVIEPRAVLLKTLVL 602
Query: 498 GCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR---- 553
C + ++ + DI ++++ +Y + + + V D M R
Sbjct: 603 VCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTP 662
Query: 554 NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTY-IAIFAACSHSGMVD 612
++ T+N L+ + ++ E+ R ++A K I+P+ ++Y I+A C ++ M D
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILA-----KGIKPDIISYNTVIYAYCRNTRMRD 717
Query: 613 EGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSN--MKKVDAWSSL 670
+F M+ N GI P Y + EEA +++ M + + ++S+
Sbjct: 718 AS-RIFSEMR-NSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSI 775
Query: 671 L-GACKIHQNLEVGEIAAKQLLVLEP 695
+ G CK+++ E ++ + L L+P
Sbjct: 776 VDGYCKLNRKDE-AKLFVEDLRNLDP 800
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 146/357 (40%), Gaps = 31/357 (8%)
Query: 314 SALVDMYCNCKKADKGRWVFDGI----LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVY 369
++L+ + N + + VF + + T+ +N ++ + + I +E +
Sbjct: 212 TSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 271
Query: 370 ESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIE 429
P++ T ++L+ C R + + + GF DK NAL+D+Y + R +
Sbjct: 272 SDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPK 331
Query: 430 ISKSIFGSMD----RRDIVSWNTMITGYVVCGRHDDALNLLHDM-QRGQDDEYEDDESIP 484
+ + M IV++N++I+ Y G D+A+ L + M ++G
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT----------- 380
Query: 485 LKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSR 544
KP+ T T+L G I +I +A I MY G
Sbjct: 381 -KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 545 IVFDQMP----TRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIA 600
+FD++ + +++TWN L+ +G +G E +F+ M P T+
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM-----KRAGFVPERETFNT 494
Query: 601 IFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTM 657
+ +A S G ++ + ++ M + G+ P Y ++ L R G E++ K++ M
Sbjct: 495 LISAYSRCGSFEQAMTVYRRM-LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 186/451 (41%), Gaps = 72/451 (15%)
Query: 331 WVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRC 390
W + G+ + V ++I FD + + ++E +T S LL
Sbjct: 90 WSYHGLSPQGQQVLRSLI----EPNFDSGQLDSVLSELFEPFKDKPESTSSELL------ 139
Query: 391 KAFLDKEGIHGY--VVKRGFE---KDKYVQNAL--------MDMYSRMGRIEISKSIFGS 437
AFL G H + R F+ K K Q+ L + M + GR+ + ++F
Sbjct: 140 -AFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNG 198
Query: 438 MDRR----DIVSWNTMITGYVVCGRHDDALNLLHDMQR-----------------GQ--- 473
+ D+ S+ ++I+ + GR+ +A+N+ M+ G+
Sbjct: 199 LQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGT 258
Query: 474 -----DDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGS 528
E +S + P++ T T++ C ++ + D +
Sbjct: 259 PWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYN 318
Query: 529 ALIDMYAKCGCLNLSRIVFDQMP----TRNVITWNVLIMAYGMHGKGEEALELFRRMVAE 584
AL+D+Y K + V ++M + +++T+N LI AY G +EA+EL +M AE
Sbjct: 319 ALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM-AE 377
Query: 585 KDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRS 644
K + +P+ TY + + +G V+ +++F M+ N G +P+ + + + G
Sbjct: 378 KGT----KPDVFTYTTLLSGFERAGKVESAMSIFEEMR-NAGCKPNICTFNAFIKMYGNR 432
Query: 645 GRVEEAYKLIKTMPSNMKKVD--AWSSLLGACKIHQNLEVGEIAA--KQL--LVLEPNVA 698
G+ E K+ + D W++LL QN E++ K++ P
Sbjct: 433 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAV--FGQNGMDSEVSGVFKEMKRAGFVPERE 490
Query: 699 SHYVLLSNIYSSAGLWDQAMDIRKKMKEMGV 729
+ L+S YS G ++QAM + ++M + GV
Sbjct: 491 TFNTLIS-AYSRCGSFEQAMTVYRRMLDAGV 520
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 164/412 (39%), Gaps = 70/412 (16%)
Query: 43 LRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGY 102
+++ F + + + + G+ PD + +L A G N ++ ++ G VFK
Sbjct: 426 IKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL-AVFGQNGMD--SEVSG-VFKEMK 481
Query: 103 ASTSVA---VANSLVNMYGKCGDLAGAHHVFDRISD----RDHVSWNSMIAAACRFXXXX 155
+ V N+L++ Y +CG A V+ R+ D D ++N+++AA R
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541
Query: 156 XXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRD-GL--SLGKQVHAYTFRNGDWRTFTNN 212
P T S+ HA +N ++ GL SL ++V++ + R
Sbjct: 542 QSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVI---EPRAVLLK 598
Query: 213 ALVTMYAKLGRIDEAKALFGLFDDK----DLVSWNTVISSLSQNDRFEEALLFLYHMLQS 268
LV + +K + EA+ F ++ D+ + N+++S + +A L +M +
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER 658
Query: 269 GVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADK 328
G P T S MY + + AD
Sbjct: 659 GFTPSMATYNSL--------------------------------------MYMHSRSADF 680
Query: 329 GRWVFDGILRRTVA--------VWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTL 380
G+ + ILR +A +N +I Y RN +A ++F EM S P+ T
Sbjct: 681 GKS--EEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM-RNSGIVPDVITY 737
Query: 381 SSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISK 432
++ + + F + G+ Y++K G ++ N+++D Y ++ R + +K
Sbjct: 738 NTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 153/333 (45%), Gaps = 38/333 (11%)
Query: 407 GFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD----RRDIVSWNTMITGYVVCGRHDDA 462
G E Y N LM+ ++ ++ +F M+ + DIV++NTMI GY G+ A
Sbjct: 217 GIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKA 276
Query: 463 LNLLHDMQ-RGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLA 521
+ L DM+ RG + + +T MT++ C ++ ++ +
Sbjct: 277 MEKLRDMETRGHE------------ADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQ 324
Query: 522 TDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR----NVITWNVLIMAYGMHGKGEEALEL 577
S +I K G LN VF+ M + NV + VLI Y G E+A+ L
Sbjct: 325 VPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRL 384
Query: 578 FRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACL 637
RM+ E +P+ VTY + +G V+E L+ FHT + + G+ +S Y+ L
Sbjct: 385 LHRMIDEG-----FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD-GLAINSMFYSSL 438
Query: 638 VDLLGRSGRVEEAYKLIKTMPSNMKKVDA--WSSLLGACKIHQNLEVGEIAAKQLLVLE- 694
+D LG++GRV+EA +L + M D+ +++L+ A H+ ++ K++ E
Sbjct: 439 IDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEG 498
Query: 695 --PNVASHYVLLSNIY------SSAGLWDQAMD 719
V ++ +LLS ++ + LWD +D
Sbjct: 499 CDQTVYTYTILLSGMFKEHRNEEALKLWDMMID 531
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 127/287 (44%), Gaps = 40/287 (13%)
Query: 209 FTNNALVTMYAKLGRIDEAKALFGLFDD----KDLVSWNTVISSLSQNDRFEEALLFLYH 264
+T N L+ +D A+ +F + + D+V++NT+I + + ++A+ L
Sbjct: 223 YTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRD 282
Query: 265 MLQSGVRPDGVTLASALPACS-----------HLEMLRTGKEIHGYALRNTDLIDNSFVG 313
M G D +T + + AC + EM G ++ +A
Sbjct: 283 METRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF------------ 330
Query: 314 SALVDMYCNCKKADKGRWVFDGILRR----TVAVWNAMIAGYARNEFDDEAIKLFIEMVY 369
S ++ C K ++G VF+ ++R+ VA++ +I GYA++ ++AI+L M+
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
Query: 370 ESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKR--GFEKDKYVQNALMDMYSRMGR 427
E F P+ T S ++ CK +E + + R G + ++L+D + GR
Sbjct: 391 EG-FKPDVVTYSVVVNGL--CKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 447
Query: 428 IEISKSIFGSMDR----RDIVSWNTMITGYVVCGRHDDALNLLHDMQ 470
++ ++ +F M RD +N +I + + D+A+ L M+
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRME 494
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/436 (19%), Positives = 173/436 (39%), Gaps = 39/436 (8%)
Query: 58 TYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMY 117
+ M G+ P + + ++ ++ +++ V + G + N+++ Y
Sbjct: 209 VWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVMESGRIKPDIVTYNTMIKGY 267
Query: 118 GKCGDLAGAHHVFDRISDRDH----VSWNSMIAA--ACRFXXXXXXXXXXXXXXXXNVDP 171
K G A + R H +++ +MI A A V P
Sbjct: 268 CKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPP 327
Query: 172 TSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFT-NNALVTMYAKLGRIDEAKAL 230
+F+LV I C + L+ G V R G L+ YAK G +++A L
Sbjct: 328 HAFSLV-IGGLCKEGK--LNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRL 384
Query: 231 FGLFDDK----DLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH 286
D+ D+V+++ V++ L +N R EEAL + + G+ + + +S +
Sbjct: 385 LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGK 444
Query: 287 LEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILR-----RTV 341
+ + + + +S+ +AL+D + +K D+ +F + +TV
Sbjct: 445 AGRVDEAERLFE-EMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTV 503
Query: 342 AVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPA-CV-----RCKAFLD 395
+ +++G + ++EA+KL+ +M+ + TP + +L C+ R LD
Sbjct: 504 YTYTILLSGMFKEHRNEEALKLW-DMMIDKGITPTAACFRALSTGLCLSGKVARACKILD 562
Query: 396 KEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI-EISKSIFGSMDR-RDIVS--WNTMIT 451
+ G ++ E +++ + GRI E K G +R R++ MI
Sbjct: 563 ELAPMGVILDAACED-------MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMIN 615
Query: 452 GYVVCGRHDDALNLLH 467
G+ D A+ L+H
Sbjct: 616 ALRKVGKADLAMKLMH 631
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/504 (21%), Positives = 199/504 (39%), Gaps = 123/504 (24%)
Query: 190 LSLGKQVHAYTFRNGDWRT-FTNNALVTMYAKLGRIDEAKALFGLFDD----KDLVSWNT 244
+++ K++ F G T + +AL++ Y + G +EA ++F + +LV++N
Sbjct: 249 VTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNA 308
Query: 245 VISSLSQND-RFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRN 303
VI + + F++ F M ++GV+PD +T S L CS + + + + N
Sbjct: 309 VIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFD-EMTN 367
Query: 304 TDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI----LRRTVAVWNAMIAGYARNEFDDE 359
+ + F + L+D C + D + + + V ++ +I G+A+ DE
Sbjct: 368 RRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDE 427
Query: 360 AIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALM 419
A+ LF EM Y G D+ N L+
Sbjct: 428 ALNLFGEMRY------------------------------------LGIALDRVSYNTLL 451
Query: 420 DMYSRMGRIEISKSIFGSMD----RRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDD 475
+Y+++GR E + I M ++D+V++N ++ GY G++D+ + +M+R
Sbjct: 452 SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH-- 509
Query: 476 EYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYA 535
+ PN +T T++ G EI L D+ + SALID
Sbjct: 510 ---------VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALC 560
Query: 536 KCGCLNLSRIVFDQMP----TRNVITWNVLIMAYG------------------------- 566
K G + + + D+M + NV+T+N +I A+G
Sbjct: 561 KNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALS 620
Query: 567 --MHGKGEEALELFRRMVAEKDSNK------------------------EIRPNEVTYIA 600
+G ++LF ++ E ++ EI+PN VT+ A
Sbjct: 621 ALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSA 680
Query: 601 IFAACSH------SGMVDEGLNLF 618
I ACS + M+ E L LF
Sbjct: 681 ILNACSRCNSFEDASMLLEELRLF 704
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 155/349 (44%), Gaps = 29/349 (8%)
Query: 314 SALVDMYCNCKKADKGRWVFDGI----LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVY 369
SAL+ Y ++ VF+ + LR + +NA+I + + + + F + +
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 370 ESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIE 429
+ P+ T +SLL C R + + + R E+D + N L+D + G+++
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 430 ISKSIFGSMDRR----DIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPL 485
++ I M + ++VS++T+I G+ GR D+ALNL +M+ + +
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY-----------LGI 440
Query: 486 KPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRI 545
+ V+ T+L +I + D+ +AL+ Y K G + +
Sbjct: 441 ALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKK 500
Query: 546 VFDQMPTR----NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAI 601
VF +M N++T++ LI Y G +EA+E+FR + +R + V Y A+
Sbjct: 501 VFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF-----KSAGLRADVVLYSAL 555
Query: 602 FAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEA 650
A +G+V ++L M GI P+ Y ++D GRS ++ +
Sbjct: 556 IDALCKNGLVGSAVSLIDEM-TKEGISPNVVTYNSIIDAFGRSATMDRS 603
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 170/351 (48%), Gaps = 35/351 (9%)
Query: 398 GIHGYVVKRGFEKDKY--VQNALMDMYSRMGRIEISKSIFGSMDR----RDIVSWNTMIT 451
G + + VKR K++ + +A++ R G++ I+K IF + + +++ +I+
Sbjct: 217 GFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALIS 276
Query: 452 GYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXX-XXXXE 510
Y G H++A+++ + M+ EY L+PN VT V+ C +
Sbjct: 277 AYGRSGLHEEAISVFNSMK-----EYG------LRPNLVTYNAVIDACGKGGMEFKQVAK 325
Query: 511 IHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR----NVITWNVLIMAYG 566
+ + D ++L+ + ++ G +R +FD+M R +V ++N L+ A
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 567 MHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHG 626
G+ + A E+ +M K I PN V+Y + + +G DE LNLF M+ G
Sbjct: 386 KGGQMDLAFEILAQMPV-----KRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY-LG 439
Query: 627 IEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPS-NMKK-VDAWSSLLGA-CKIHQNLEVG 683
I Y L+ + + GR EEA +++ M S +KK V +++LLG K + EV
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 684 EI--AAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKE 732
++ K+ VL PN+ ++ L+ YS GL+ +AM+I ++ K G+R +
Sbjct: 500 KVFTEMKREHVL-PNLLTYSTLIDG-YSKGGLYKEAMEIFREFKSAGLRAD 548
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/485 (21%), Positives = 199/485 (41%), Gaps = 86/485 (17%)
Query: 208 TFTNNALVTMYAKLGRIDEAKALFG----LFDDKDLVSWNTVISSLSQNDRFEEALLFLY 263
T T + L+ GR+ EA L + DL++ NT+++ L + + EA+L +
Sbjct: 158 TITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLID 217
Query: 264 HMLQSGVRPDGVTLASALPA-CSH------LEMLRTGKEIHGYALRNTDLIDNSFVGSAL 316
M++ G +P+ VT L C +E+LR +E RN L ++ S +
Sbjct: 218 KMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE------RNIKL--DAVKYSII 269
Query: 317 VDMYCNCKKADKGRWVFDGI----LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESD 372
+D C D +F+ + + + +N +I G+ D+ KL +M+ +
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI-KRK 328
Query: 373 FTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISK 432
PN T S L+ + V+ + E +H ++ RG D +L+D + + ++ +
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 433 SIFGSMDRR----DIVSWNTMITGYVVCGRHDDALNLLHDMQ-RGQDDEYEDDESIPLKP 487
+ M + +I ++N +I GY R DD L L M RG
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG--------------- 433
Query: 488 NSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVF 547
+ D + LI + + G LN+++ +F
Sbjct: 434 --------------------------------VVADTVTYNTLIQGFCELGKLNVAKELF 461
Query: 548 DQMPTR----NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFA 603
+M +R N++T+ +L+ +G+ E+ALE+F EK ++ + Y I
Sbjct: 462 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF-----EKIEKSKMELDIGIYNIIIH 516
Query: 604 ACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKK 663
++ VD+ +LF ++ G++P Y ++ L + G + EA L + M +
Sbjct: 517 GMCNASKVDDAWDLFCSLPL-KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575
Query: 664 VDAWS 668
D W+
Sbjct: 576 PDGWT 580
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 177/428 (41%), Gaps = 67/428 (15%)
Query: 314 SALVDMYCNCKKADKGRWVFDGILRR----TVAVWNAMIAGYARNEFDDEAIKLFIEMVY 369
S LVD+ KAD +F ++ TV ++ + + A+ + D + L +M
Sbjct: 62 SGLVDI-----KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMEL 116
Query: 370 ESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIE 429
+ N TLS ++ RC+ G ++K G+E + + L++ GR+
Sbjct: 117 KG-IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVS 175
Query: 430 ISKSIFGSM----DRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPL 485
+ + M + D+++ NT++ G + G+ +A+ L+ M EY
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV-----EY------GC 224
Query: 486 KPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRI 545
+PN+VT VL E+ ++ + D S +ID K G L+ +
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284
Query: 546 VFDQMP----TRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAI 601
+F++M T N+IT+N+LI + G+ ++ +L R M+ K I PN VT+ +
Sbjct: 285 LFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK-----INPNVVTFSVL 339
Query: 602 FAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNM 661
+ G + E L H + GI P + Y L+D + +++A +++ M S
Sbjct: 340 IDSFVKEGKLREAEEL-HKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK- 397
Query: 662 KKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIR 721
C +PN+ + +L+ N Y A D +++
Sbjct: 398 -----------GC-------------------DPNIRTFNILI-NGYCKANRIDDGLELF 426
Query: 722 KKMKEMGV 729
+KM GV
Sbjct: 427 RKMSLRGV 434
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/521 (21%), Positives = 218/521 (41%), Gaps = 73/521 (14%)
Query: 190 LSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFG----LFDDKDLVSWNTV 245
+SLG+++ +G +T N L+ + + +I A AL G L + +V+ +++
Sbjct: 105 ISLGEKMQRLEIVHG---LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL 161
Query: 246 ISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPAC--------------------S 285
++ R +A+ + M++ G RPD +T + +
Sbjct: 162 LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 221
Query: 286 HLEMLRTGKEIHGYALR-NTDLIDNSF-------------VGSALVDMYCNCKKADKGRW 331
++ G ++G R +TDL N + + ++D C + D
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 332 VFDGI----LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPAC 387
+F + +R V ++++I+ +A +L +M+ E PN T ++L+ A
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI-EKKINPNLVTFNALIDAF 340
Query: 388 VRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRR----DI 443
V+ F++ E ++ ++KR + D + N+L++ + R++ +K +F M + D+
Sbjct: 341 VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 400
Query: 444 VSWNTMITGYVVCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXX 502
V++NT+I G+ R +D L +M RG L ++VT T++ G
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRG------------LVGDTVTYTTLIQGLFHD 448
Query: 503 XXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR----NVITW 558
++ + + DI S L+D G L + VFD M ++ +
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Query: 559 NVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLF 618
+I GK ++ +LF + S K ++PN VTY + + ++ E L
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSL-----SLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 619 HTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPS 659
MK + G P+S Y L+ R G + +LI+ M S
Sbjct: 564 KKMKED-GPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 205/475 (43%), Gaps = 60/475 (12%)
Query: 344 WNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYV 403
+N +I + R A+ L +M+ + + P+ TLSSLL K D + +
Sbjct: 123 YNILINCFCRRSQISLALALLGKMM-KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 404 VKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRR----DIVSWNTMITGYVVCGRH 459
V+ G+ D L+ + + ++ M +R ++V++ ++ G G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 460 DDALNLLHDMQ---------------------RGQDDE---YEDDESIPLKPNSVTLMTV 495
D ALNLL+ M+ R DD +++ E+ ++PN VT ++
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 496 LPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR-- 553
+ ++ + +++K+ ++ +ALID + K G + ++D M R
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 554 --NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMV 611
++ T+N L+ + MH + ++A ++F MV+ K+ P+ VTY + S V
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS-----KDCFPDVVTYNTLIKGFCKSKRV 416
Query: 612 DEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVD--AWSS 669
++G LF M ++ G+ + Y L+ L G + A K+ K M S+ D +S
Sbjct: 417 EDGTELFREM-SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 670 LL-GAC---KIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMK 725
LL G C K+ + LEV + K + L+ + Y + AG D D+ +
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI---YTTMIEGMCKAGKVDDGWDLFCSLS 532
Query: 726 EMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDT 780
GV+ + + + + S SK L + LL++M+++G +P++
Sbjct: 533 LKGVKP----NVVTYNTMI--------SGLCSKRLLQEAYALLKKMKEDGPLPNS 575
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/383 (20%), Positives = 151/383 (39%), Gaps = 50/383 (13%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+A++ MV G P+ + V+ D +L + + + V + N++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM-EAAKIEADVVIFNTI 266
Query: 114 VNMYGKCGDLAGAHHVFDRISDR----DHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNV 169
++ K + A ++F + + + V+++S+I+ C + +
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 170 DPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKA 229
+P T ++ A + K R+ D FT N+LV + R+D+AK
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 230 LFGLFDDK----DLVSWNTVISSLSQNDRFEEAL-LF---------------------LY 263
+F K D+V++NT+I ++ R E+ LF L+
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 264 H-------------MLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNS 310
H M+ GV PD +T + L + L E+ Y ++ +++ +
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY-MQKSEIKLDI 505
Query: 311 FVGSALVDMYCNCKKADKGRWVFDGI----LRRTVAVWNAMIAGYARNEFDDEAIKLFIE 366
++ + +++ C K D G +F + ++ V +N MI+G EA L +
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565
Query: 367 MVYESDFTPNSTTLSSLLPACVR 389
M E PNS T ++L+ A +R
Sbjct: 566 M-KEDGPLPNSGTYNTLIRAHLR 587
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 212/470 (45%), Gaps = 77/470 (16%)
Query: 209 FTNNALVTMYAKLGRIDEAKALFG----LFDDKDLVSWNTVISSLSQNDRFEEALLFLYH 264
+T N L+ + + + A + G L + D+V++ ++I+ +R EEA+ +
Sbjct: 108 YTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQ 167
Query: 265 MLQSGVRPDGV---TLASALPACSHLEM-LRTGKEIHGYALRNTDLIDNSFVGSALVDMY 320
M++ G++PD V T+ +L H+ L ++ Y +R D++ + ++LV+
Sbjct: 168 MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIR-PDVV----MYTSLVNGL 222
Query: 321 CNCKKADKGRWV-FDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTT 379
CN GRW D +LR G + + P+ T
Sbjct: 223 CN-----SGRWRDADSLLR-----------GMTKRKIK-----------------PDVIT 249
Query: 380 LSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD 439
++L+ A V+ FLD E ++ +++ + + +L++ + G ++ ++ +F M+
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 440 RR----DIVSWNTMITGYVVCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKPNSVTLMT 494
+ D+V++ ++I G+ C + DDA+ + ++M Q+G L N++T T
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG------------LTGNTITYTT 357
Query: 495 VLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR- 553
++ G E+ ++ + + + +I + L+ G + + ++F+ M R
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 554 ------NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSH 607
N+ T+NVL+ +GK E+AL MV E +E+ +TY I
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKAL-----MVFEDMRKREMDIGIITYTIIIQGMCK 472
Query: 608 SGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTM 657
+G V +NLF ++ + G++P+ Y ++ L R G EA+ L + M
Sbjct: 473 AGKVKNAVNLFCSLPSK-GVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 176/408 (43%), Gaps = 49/408 (12%)
Query: 358 DEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNA 417
+EA+ LF MV ES P+ + LL + K F + ++ G D Y N
Sbjct: 54 NEALDLFTHMV-ESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 418 LMDMYSRMGRIEISKSIFGSMDR----RDIVSWNTMITGYVVCGRHDDALNLLHDM-QRG 472
LM+ + + + ++ S G M + DIV++ ++I G+ + R ++A+++++ M + G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 473 QDDE-----------------------YEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXX 509
+ ++ E+ ++P+ V +++ G
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 510 EIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQM----PTRNVITWNVLIMAY 565
+ K+K+ D+ +ALID + K G + ++++M N+ T+ LI +
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 566 GMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANH 625
M G +EA ++F M K P+ V Y ++ VD+ + +F+ M +
Sbjct: 293 CMEGCVDEARQMFYLM-----ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM-SQK 346
Query: 626 GIEPSSDHYACLVDLLGRSGRVEEAYKLIKTM-----PSNMKKVDA-WSSLLGACKIHQN 679
G+ ++ Y L+ G+ G+ A ++ M P N++ + L K+ +
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Query: 680 LEVGE-IAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAM---DIRKK 723
L + E + +++ + PN+ ++ VLL + + L M D+RK+
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 554 NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDE 613
+++T+ LI + + + EEA+ + +MV I+P+ V Y I + +G V+
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMV-----EMGIKPDVVMYTTIIDSLCKNGHVNY 195
Query: 614 GLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVD--AWSSLL 671
L+LF M+ N+GI P Y LV+ L SGR +A L++ M K D +++L+
Sbjct: 196 ALSLFDQME-NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 672 GA-CKIHQNLEVGEIAAKQL-LVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMG 728
A K + L+ E+ + + + + PN+ + Y L N + G D+A + M+ G
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFT-YTSLINGFCMEGCVDEARQMFYLMETKG 312
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 110/489 (22%), Positives = 205/489 (41%), Gaps = 52/489 (10%)
Query: 210 TNNALVTMYAKLGRIDEAKALFG------------LFDD-------KDLVSWNTVISSLS 250
T N L+ RI EA ALFG LFD ++++NT+I+ L
Sbjct: 178 TFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLC 237
Query: 251 QNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNS 310
R EA + M+ G+ D VT + + + ++ + + T + +
Sbjct: 238 LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS-KMEETHIKPDV 296
Query: 311 FVGSALVDMYCNCKKADKGRWVFDGILRRTVA----VWNAMIAGYARNEFDDEAIKLFIE 366
+ SA++D C +++F +L + +A +N MI G+ +A +L +
Sbjct: 297 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 356
Query: 367 MVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMG 426
M+ E + P+ T ++L+ A V+ + E + ++ R D N+++ + +
Sbjct: 357 MI-EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 427 RIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLK 486
R + +K +F M D+V++NT+I Y R D+ + LL ++ R L
Sbjct: 416 RFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG-----------LV 464
Query: 487 PNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKC------GCL 540
N+ T T++ G ++ + + D + L +Y C L
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL--LYGFCENEKLEEAL 522
Query: 541 NLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTY-I 599
L ++ + + +N++I K +EA +LF + + P+ TY +
Sbjct: 523 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG-----VEPDVQTYNV 577
Query: 600 AIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPS 659
I C S + D + LFH MK N G EP + Y L+ ++G ++++ +LI M S
Sbjct: 578 MISGFCGKSAISDANV-LFHKMKDN-GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Query: 660 NMKKVDAWS 668
N DA++
Sbjct: 636 NGFSGDAFT 644
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/436 (19%), Positives = 172/436 (39%), Gaps = 54/436 (12%)
Query: 50 SSFLQAISTYANMVAAGVPPDNFAFPA----------VLKAAAGVNDLNLGKQIHGHVFK 99
+ FL+A++ + MV G+ P F VL+AAA VN + +GK +H V
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM-VGKGLHIDVVT 263
Query: 100 FG-------------------------YASTSVAVANSLVNMYGKCGDLAGAHHVFDRIS 134
+G + V + +++++ K G + A ++F +
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 135 DR----DHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFT---LVSIAHACSNLR 187
++ + ++N MI C F ++P T L+S + L
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 188 DGLSL-GKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVI 246
+ L + +H F + T T N+++ + K R D+AK +F L D+V++NT+I
Sbjct: 384 EAEKLCDEMLHRCIFPD----TVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTII 439
Query: 247 SSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDL 306
+ R +E + L + + G+ + T + + ++ L +++ + + +
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH-GV 498
Query: 307 IDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTV----AVWNAMIAGYARNEFDDEAIK 362
++ + L+ +C +K ++ +F+ I + +N +I G + DEA
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558
Query: 363 LFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMY 422
LF + P+ T + ++ A D + + G E D N L+
Sbjct: 559 LFCSLPIHG-VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617
Query: 423 SRMGRIEISKSIFGSM 438
+ G I+ S + M
Sbjct: 618 LKAGEIDKSIELISEM 633
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 184/433 (42%), Gaps = 55/433 (12%)
Query: 55 AISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLV 114
AI +M + G+ PD F V++ DL+ +I + +FG + ++V+V N +V
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSV-NVIV 266
Query: 115 NMYGKCGDLAGAHHVFDRISDR-----DHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNV 169
+ + K G + A + +S++ D ++N+++ C+
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG----------------- 309
Query: 170 DPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKA 229
+ HA + L G YT+ N++++ KLG + EA
Sbjct: 310 --------HVKHAIEIMDVMLQEGYDPDVYTY----------NSVISGLCKLGEVKEAVE 351
Query: 230 LFGLFDDKD----LVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACS 285
+ +D V++NT+IS+L + ++ EEA + G+ PD T S +
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 286 HLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI----LRRTV 341
R E+ +R+ + F + L+D C+ K D+ + + R+V
Sbjct: 412 LTRNHRVAMELF-EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470
Query: 342 AVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHG 401
+N +I G+ + EA ++F EM + NS T ++L+ + + D +
Sbjct: 471 ITYNTLIDGFCKANKTREAEEIFDEMEVHG-VSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 402 YVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRR----DIVSWNTMITGYVVCG 457
++ G + DKY N+L+ + R G I+ + I +M DIV++ T+I+G G
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 458 RHDDALNLLHDMQ 470
R + A LL +Q
Sbjct: 590 RVEVASKLLRSIQ 602
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 119/583 (20%), Positives = 215/583 (36%), Gaps = 65/583 (11%)
Query: 137 DHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHAC---SNLRDGLSLG 193
D ++N +I A CR + P T ++ +L L +
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 194 KQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALF-------GLFDDKDLVSWNTVI 246
+Q+ + W + N +V + K GR+++A G F D+ ++NT++
Sbjct: 248 EQMVEF---GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQ--YTFNTLV 302
Query: 247 SSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDL 306
+ L + + A+ + MLQ G PD T S + L ++ E+ + D
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI-TRDC 361
Query: 307 IDNSFVGSALVDMYCNCKKADKGR-----WVFDGILRRTVAVWNAMIAGYARNEFDDEAI 361
N+ + L+ C + ++ GIL V +N++I G A+
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL-PDVCTFNSLIQGLCLTRNHRVAM 420
Query: 362 KLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDM 421
+LF EM P+ T + L+ + + + + G + N L+D
Sbjct: 421 ELFEEM-RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479
Query: 422 YSRMGRIEISKSIFGSMD----RRDIVSWNTMITGYVVCGRHDDALNLLHDM-QRGQDDE 476
+ + + ++ IF M+ R+ V++NT+I G R +DA L+ M GQ
Sbjct: 480 FCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ--- 536
Query: 477 YEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAK 536
KP+ T ++L +I DI LI K
Sbjct: 537 ---------KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 537 CGCLNLSRIVFD--QMPTRNVI--TWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIR 592
G + ++ + QM N+ +N +I K EA+ LFR M+ + E
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ----NEAP 643
Query: 593 PNEVTYIAIF-AACSHSGMVDEGLNLFHTMKANHGIEPSSDHYAC--------------- 636
P+ V+Y +F C+ G + E ++ + + S Y
Sbjct: 644 PDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVK 703
Query: 637 LVDLLGRSGRV-EEAYKLIKTMPSNMKKVDAWSSLLGACKIHQ 678
LV+++ + R EE ++K + K DA ++L G Q
Sbjct: 704 LVNMVMQKARFSEEEVSMVKGLLKIRKFQDALATLGGVLDSRQ 746
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 140/362 (38%), Gaps = 83/362 (22%)
Query: 444 VSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXX 503
VS N ++ G+ GR +DALN + +M QD + P+ T T++ G
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMS-NQDGFF---------PDQYTFNTLVNGLCKAG 309
Query: 504 XXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR----NVITWN 559
EI L++ D+ +++I K G + + V DQM TR N +T+N
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 560 VLIMAYGMHGKGEEALELFRRMVA------------------------------EKDSNK 589
LI + EEA EL R + + E+ +K
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 590 EIRPNEVTYIAIFAACSHSGMVDEGLNLFHTM--------------------KAN----- 624
P+E TY + + G +DE LN+ M KAN
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 625 ---------HGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAW---SSLLG 672
HG+ +S Y L+D L +S RVE+A +L+ M +K D + S L
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 673 ACKIHQNLEVGEIA-AKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRK 731
C+ + +I A EP++ ++ L+S + AG + A + + ++ G+
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL-CKAGRVEVASKLLRSIQMKGINL 608
Query: 732 EP 733
P
Sbjct: 609 TP 610
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 138/341 (40%), Gaps = 22/341 (6%)
Query: 55 AISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLV 114
AI M+ G PD + + +V+ + ++ ++ + + +V N+L+
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY-NTLI 372
Query: 115 NMYGKCGDLAGAHHVFDRISDR----DHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD 170
+ K + A + ++ + D ++NS+I C +
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE 432
Query: 171 PTSFTL-VSIAHACSN--LRDGLSLGKQVHAYTFRNGDWRT-FTNNALVTMYAKLGRIDE 226
P FT + I CS L + L++ KQ+ +G R+ T N L+ + K + E
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMEL----SGCARSVITYNTLIDGFCKANKTRE 488
Query: 227 AKALFGLFD----DKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALP 282
A+ +F + ++ V++NT+I L ++ R E+A + M+ G +PD T S L
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Query: 283 ACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI----LR 338
++ +I N D G+ L+ C + + + I +
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT-LISGLCKAGRVEVASKLLRSIQMKGIN 607
Query: 339 RTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTT 379
T +N +I G R EAI LF EM+ +++ P++ +
Sbjct: 608 LTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVS 648
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 107/476 (22%), Positives = 201/476 (42%), Gaps = 52/476 (10%)
Query: 223 RIDEAKALFG------------LFDD-------KDLVSWNTVISSLSQNDRFEEALLFLY 263
RI EA ALFG LFD ++++NT+I+ L R EA +
Sbjct: 191 RISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250
Query: 264 HMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNC 323
M+ G+ D VT + + + ++ + + T + + + SA++D C
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS-KMEETHIKPDVVIYSAIIDRLCKD 309
Query: 324 KKADKGRWVFDGILRRTVA----VWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTT 379
+++F +L + +A +N MI G+ +A +L +M+ E + P+ T
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI-EREINPDVLT 368
Query: 380 LSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD 439
++L+ A V+ + E + ++ R D N+++ + + R + +K +F M
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA 428
Query: 440 RRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
D+V++NT+I Y R D+ + LL ++ R L N+ T T++ G
Sbjct: 429 SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR-----------GLVANTTTYNTLIHGF 477
Query: 500 XXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKC------GCLNLSRIVFDQMPTR 553
++ + + D + L +Y C L L ++
Sbjct: 478 CEVDNLNAAQDLFQEMISHGVCPDTITCNIL--LYGFCENEKLEEALELFEVIQMSKIDL 535
Query: 554 NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTY-IAIFAACSHSGMVD 612
+ + +N++I K +EA +LF + + P+ TY + I C S + D
Sbjct: 536 DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG-----VEPDVQTYNVMISGFCGKSAISD 590
Query: 613 EGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWS 668
+ LFH MK N G EP + Y L+ ++G ++++ +LI M SN DA++
Sbjct: 591 ANV-LFHKMKDN-GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/436 (19%), Positives = 172/436 (39%), Gaps = 54/436 (12%)
Query: 50 SSFLQAISTYANMVAAGVPPDNFAFPA----------VLKAAAGVNDLNLGKQIHGHVFK 99
+ FL+A++ + MV G+ P F VL+AAA VN + +GK +H V
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM-VGKGLHIDVVT 263
Query: 100 FG-------------------------YASTSVAVANSLVNMYGKCGDLAGAHHVFDRIS 134
+G + V + +++++ K G + A ++F +
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 135 DR----DHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFT---LVSIAHACSNLR 187
++ + ++N MI C F ++P T L+S + L
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 188 DGLSL-GKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVSWNTVI 246
+ L + +H F + T T N+++ + K R D+AK +F L D+V++NT+I
Sbjct: 384 EAEKLCDEMLHRCIFPD----TVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTII 439
Query: 247 SSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDL 306
+ R +E + L + + G+ + T + + ++ L +++ + + +
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH-GV 498
Query: 307 IDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTV----AVWNAMIAGYARNEFDDEAIK 362
++ + L+ +C +K ++ +F+ I + +N +I G + DEA
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558
Query: 363 LFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMY 422
LF + P+ T + ++ A D + + G E D N L+
Sbjct: 559 LFCSLPIHG-VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617
Query: 423 SRMGRIEISKSIFGSM 438
+ G I+ S + M
Sbjct: 618 LKAGEIDKSIELISEM 633
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/445 (22%), Positives = 199/445 (44%), Gaps = 49/445 (11%)
Query: 210 TNNALVTMYAKLGRIDEAKALFGLFDD----KDLVSWNTVISSLSQNDRFEEALLFLYHM 265
T ++L+ Y RI +A AL + D +++ T+I L +++ EA+ + M
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 266 LQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRN----TDLIDNSFVGSALVDMYC 321
+Q G +P+ VT + + + G + L N + N + S ++D C
Sbjct: 217 VQRGCQPNLVTYGVVVNG-----LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC 271
Query: 322 NCKKADKGRWVFDGI----LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNS 377
+ D +F + +R V ++++I+ E +A +L +M+ E PN
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI-ERKINPNV 330
Query: 378 TTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGS 437
T ++L+ A V+ ++ E ++ ++KR + D + ++L++ + R++ +K +F
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390
Query: 438 MDRRD----IVSWNTMITGYVVCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKPNSVTL 492
M +D +V++NT+I G+ R D+ + L +M QRG L N+VT
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG------------LVGNTVTY 438
Query: 493 MTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQM-- 550
T++ G + + + +I + L+D K G L + +VF+ +
Sbjct: 439 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 498
Query: 551 ----PTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACS 606
PT + T+N++I GK E+ +LF + S K ++P+ + Y + +
Sbjct: 499 SKMEPT--IYTYNIMIEGMCKAGKVEDGWDLFCSL-----SLKGVKPDVIIYNTMISGFC 551
Query: 607 HSGMVDEGLNLFHTMKANHGIEPSS 631
G+ +E LF M+ + G P S
Sbjct: 552 RKGLKEEADALFRKMRED-GPLPDS 575
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 102/474 (21%), Positives = 207/474 (43%), Gaps = 58/474 (12%)
Query: 344 WNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYV 403
+N +I + R A+ L +M+ + + P+ TLSSLL K D + +
Sbjct: 123 YNILINCFCRRSQISLALALLGKMM-KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 404 VKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRR----DIVSWNTMITGYVVCGRH 459
V+ G+ D L+ + + ++ M +R ++V++ ++ G G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 460 DDALNLLHDMQ---------------------RGQDDE---YEDDESIPLKPNSVTLMTV 495
D A NLL+ M+ R +DD + + E+ ++PN +T ++
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 496 LPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR-- 553
+ + + +++K+ ++ +ALID + K G L + ++D+M R
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 554 --NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMV 611
++ T++ LI + MH + +EA +F M++ K+ PN VTY + + +
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMIS-----KDCFPNVVTYNTLINGFCKAKRI 416
Query: 612 DEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSN--MKKVDAWSS 669
DEG+ LF M + G+ ++ Y L+ ++ + A + K M S+ + +++
Sbjct: 417 DEGVELFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNT 475
Query: 670 LL-GACKIHQNLEVGEIAAK--QLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKE 726
LL G CK + LE + + Q +EP + ++ +++ + AG + D+ +
Sbjct: 476 LLDGLCK-NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM-CKAGKVEDGWDLFCSLSL 533
Query: 727 MGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDT 780
GV+ + I + + F K L E + L ++MR++G +PD+
Sbjct: 534 KGVKPD----VIIYNTMISGFC--------RKGLKEEADALFRKMREDGPLPDS 575
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/398 (17%), Positives = 153/398 (38%), Gaps = 52/398 (13%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+A++ MV G P+ + V+ D++L + + + +V + +++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEANVVIYSTV 266
Query: 114 VNMYGKCGDLAGAHHVFDRISDR----DHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNV 169
++ K A ++F + ++ + ++++S+I+ C + +
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 170 DPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKA 229
+P T ++ A + K R+ D FT ++L+ + R+DEAK
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 230 LFGLFDDKD----LVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACS 285
+F L KD +V++NT+I+ + R +E + M Q G+ + VT +
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL----- 441
Query: 286 HLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVF-----DGILRRT 340
IHG+ + D + VF DG+
Sbjct: 442 ----------IHGFF---------------------QARDCDNAQMVFKQMVSDGV-HPN 469
Query: 341 VAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIH 400
+ +N ++ G +N ++A+ +F E + S P T + ++ + D +
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVF-EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528
Query: 401 GYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSM 438
+ +G + D + N ++ + R G E + ++F M
Sbjct: 529 CSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 125/620 (20%), Positives = 253/620 (40%), Gaps = 78/620 (12%)
Query: 213 ALVTMYAKLGRIDEAKALFGLFD----DKDLVSWNTVISSLSQNDRFEEALLFLYHMLQS 268
L+ +AK GR+D A +L D D+V +N I S + + + A F + + +
Sbjct: 208 TLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN 267
Query: 269 GVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADK 328
G++PD VT S + L E+ + +N + ++ + ++ Y + K D+
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR-VPCTYAYNTMIMGYGSAGKFDE 326
Query: 329 GRWVFDGILRR----TVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLL 384
+ + + +V +N ++ + DEA+K+F EM + D PN +T + L+
Sbjct: 327 AYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM--KKDAAPNLSTYNILI 384
Query: 385 PACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRR--- 441
R + + K G + N ++D + +++ + ++F MD +
Sbjct: 385 DMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCT 444
Query: 442 -DIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCX 500
D +++ ++I G GR DDA + YE + NS+ +++
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKV-----------YEKMLDSDCRTNSIVYTSLIKNFF 493
Query: 501 XXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVI---- 556
+I+ + Q + D+ + + +D K G R +F+++ R +
Sbjct: 494 NHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR 553
Query: 557 TWNVLIMAYGMHGKGEEALELFRRM------------------------------VAEKD 586
++++LI G E ELF M + E+
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 587 SNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGR 646
K P VTY ++ + +DE LF K+ IE + Y+ L+D G+ GR
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR-IELNVVIYSSLIDGFGKVGR 672
Query: 647 VEEAYKLIKTMPSN--MKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLE--PNVASHYV 702
++EAY +++ + + W+SLL A + + + + + L+ PN ++ +
Sbjct: 673 IDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGI 732
Query: 703 LLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASHPQSKELHE 762
L++ + +++A ++M++ G+ K S+ + K AG+ + +
Sbjct: 733 LINGL-CKVRKFNKAFVFWQEMQKQGM-KPSTISYTTMISGLAK--AGNIAEAGA----- 783
Query: 763 YLENLLQRMRKEGYVPDTSC 782
L R + G VPD++C
Sbjct: 784 ----LFDRFKANGGVPDSAC 799
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 114/581 (19%), Positives = 235/581 (40%), Gaps = 54/581 (9%)
Query: 107 VAVANSLVNMYGKCGDLAGAHHVFDRIS----DRDHVSWNSMIAAACRFXXXXXXXXXXX 162
+ + N ++ +GK G + A F I D V++ SMI C+
Sbjct: 238 IVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFE 297
Query: 163 XXXXXNVDPTSF---TLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYA 219
P ++ T++ + + SL ++ A + N ++T
Sbjct: 298 HLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA---KGSIPSVIAYNCILTCLR 354
Query: 220 KLGRIDEAKALFGLFDD---KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVT 276
K+G++DEA +F +L ++N +I L + + + A M ++G+ P+ T
Sbjct: 355 KMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRT 414
Query: 277 ---LASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVF 333
+ L L+ E Y + D I +F +L+D + D V+
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI--TFC--SLIDGLGKVGRVDDAYKVY 470
Query: 334 DGIL----RRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVR 389
+ +L R V+ ++I + + ++ K++ +M+ + +P+ L++ + +
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI-NQNCSPDLQLLNTYMDCMFK 529
Query: 390 CKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRR----DIVS 445
+ + R F D + L+ + G + +F SM + D +
Sbjct: 530 AGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA 589
Query: 446 WNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXX 505
+N +I G+ CG+ + A LL +M+ + +P VT +V+ G
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMK-----------TKGFEPTVVTYGSVIDGLAKIDRL 638
Query: 506 XXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMP----TRNVITWNVL 561
+ A +++ ++ + S+LID + K G ++ + ++ +++ T N+ TWN L
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698
Query: 562 IMAYGMHGKGEEALELFRRMVAEKDSNKEIR--PNEVTYIAIFAACSHSGMVDEGLNLFH 619
+ A + EAL F+ M KE++ PN+VTY + ++ +
Sbjct: 699 LDALVKAEEINEALVCFQSM-------KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751
Query: 620 TMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSN 660
M+ G++PS+ Y ++ L ++G + EA L +N
Sbjct: 752 EMQ-KQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKAN 791
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 121/639 (18%), Positives = 246/639 (38%), Gaps = 130/639 (20%)
Query: 64 AAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCGDL 123
A G+ PD + +++ N L+ ++ H+ K + A N+++ YG G
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAY-NTMIMGYGSAGKF 324
Query: 124 AGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHAC 183
A+ + +R R S S+IA C +++
Sbjct: 325 DEAYSLLER--QRAKGSIPSVIAYNC--------------------------ILTCLRKM 356
Query: 184 SNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKAL------FGLFDDK 237
+ + L + +++ ++ T N L+ M + G++D A L GLF +
Sbjct: 357 GKVDEALKVFEEMK----KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNV 412
Query: 238 DLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIH 297
V N ++ L ++ + +EA M PD +T S + + + +++
Sbjct: 413 RTV--NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Query: 298 GYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAGYARNEF- 356
L ++D NS V ++L+ + N + + G ++ ++ + + ++ Y F
Sbjct: 471 EKML-DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFK 529
Query: 357 --DDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYV 414
+ E + E + F P++ + S L IHG ++K GF + Y
Sbjct: 530 AGEPEKGRAMFEEIKARRFVPDARSYSIL---------------IHG-LIKAGFANETY- 572
Query: 415 QNALMDMYSRMGRIEISKSIFGSMDRR----DIVSWNTMITGYVVCGRHDDALNLLHDMQ 470
+F SM + D ++N +I G+ CG+ + A LL +M+
Sbjct: 573 ------------------ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614
Query: 471 RGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSAL 530
+ +P VT +V+ G + A +++ ++ + S+L
Sbjct: 615 -----------TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL 663
Query: 531 IDMYAKCGCLNLSRIVFDQMP----TRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKD 586
ID + K G ++ + ++ +++ T N+ TWN L+ A + EAL F+ M K
Sbjct: 664 IDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKC 723
Query: 587 SNKEI------------------------------RPNEVTYIAIFAACSHSGMVDEGLN 616
+ ++ +P+ ++Y + + + +G + E
Sbjct: 724 TPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA 783
Query: 617 LFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIK 655
LF KAN G+ P S Y +++ L R +A+ L +
Sbjct: 784 LFDRFKANGGV-PDSACYNAMIEGLSNGNRAMDAFSLFE 821
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 117/536 (21%), Positives = 224/536 (41%), Gaps = 49/536 (9%)
Query: 209 FTNNALVTMYAKLGRIDEAKALFGLFDDK----DLVSWNTVISSLSQNDRFEEALLFLYH 264
FT N + + G +D A + G ++ D++++N +I L +N +F+EA ++L
Sbjct: 252 FTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGK 311
Query: 265 MLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCK 324
M+ G+ PD T + + M++ + I G A+ N + + F +L+D C+
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFN-GFVPDQFTYRSLIDGLCHEG 370
Query: 325 KADKGRWVFDGIL----RRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTL 380
+ ++ +F+ L + V ++N +I G + EA +L EM E P T
Sbjct: 371 ETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS-EKGLIPEVQTF 429
Query: 381 SSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDR 440
+ L+ + D +G+ ++ +G+ D + N L+ YS ++E + I M
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLD 489
Query: 441 R----DIVSWNTMITGYVVCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKPNSVTLMTV 495
D+ ++N+++ G + +D + M ++G PN T +
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG------------CAPNLFTFNIL 537
Query: 496 LPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMP---- 551
L + + + D LID + K G L+ + +F +M
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 552 -TRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGM 610
+ + T+N++I A+ A +LF+ MV ++ + P+ TY + +G
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV-----DRCLGPDGYTYRLMVDGFCKTGN 652
Query: 611 VDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSL 670
V+ G M N G PS +++ L RV EA +I M +A +++
Sbjct: 653 VNLGYKFLLEMMEN-GFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTI 711
Query: 671 LGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKE 726
C + + E+AA + LVLE + + Y+ L+D D R + K+
Sbjct: 712 ---CDVDKK----EVAAPK-LVLEDLLKKSCI---TYYAYELLFDGLRDKRLRKKK 756
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 202/471 (42%), Gaps = 45/471 (9%)
Query: 210 TNNALVTMYAKLGRIDEAKALFGLFDD----KDLVSWNTVISSLSQNDRFEEALLFLYHM 265
T ++L+ Y RI +A AL + D +++ T+I L +++ EA+ + M
Sbjct: 82 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 141
Query: 266 LQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRN----TDLIDNSFVGSALVDMYC 321
+Q G +P+ VT + + + G + L N + + + + ++D C
Sbjct: 142 VQRGCQPNLVTYGVVVNG-----LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 196
Query: 322 NCKKADKGRWVFDGI----LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNS 377
+ D +F + +R V ++++I+ +A +L +M+ E PN
Sbjct: 197 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI-EKKINPNL 255
Query: 378 TTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGS 437
T ++L+ A V+ F++ E +H ++KR + D + N+L++ + R++ +K +F
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315
Query: 438 MDRR----DIVSWNTMITGYVVCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKPNSVTL 492
M + D+ ++NT+I G+ R +D L +M RG L ++VT
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG------------LVGDTVTY 363
Query: 493 MTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPT 552
T++ G ++ + + DI S L+D G L + VFD M
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Query: 553 R----NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHS 608
++ + +I GK ++ +LF + S K ++PN VTY + +
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-----SLKGVKPNVVTYNTMISGLCSK 478
Query: 609 GMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPS 659
++ E L MK + G P S Y L+ R G + +LI+ M S
Sbjct: 479 RLLQEAYALLKKMKED-GPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 197/468 (42%), Gaps = 91/468 (19%)
Query: 344 WNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCK------AFLDKE 397
+N +I + R A+ L +M+ + + P+ TLSSLL K A +D+
Sbjct: 48 YNILINCFCRRSQISLALALLGKMM-KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 398 GIHGY-----------------------------VVKRGFEKDKYVQNALMDMYSRMGRI 428
GY +V+RG + + +++ + G I
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166
Query: 429 EISKSIFGSMD----RRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIP 484
+++ ++ M+ D+V +NT+I DDALNL +M E+
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-----------ETKG 215
Query: 485 LKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSR 544
++PN VT +++ ++ + +++K+ ++ +ALID + K G +
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 545 IVFDQMPTR----NVITWNVLIMAYGMHGKGEEALELFRRMVAE---------------- 584
+ D M R ++ T+N LI + MH + ++A ++F MV++
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 585 --------------KDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPS 630
+ S++ + + VTY + H G D +F M ++ G+ P
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPD 394
Query: 631 SDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAW---SSLLGACKIHQNLEVGEI-A 686
Y+ L+D L +G++E+A ++ M + K+D + + + G CK + + ++
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 687 AKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPG 734
+ L ++PNV ++ ++S + S L +A + KKMKE G + G
Sbjct: 455 SLSLKGVKPNVVTYNTMISGL-CSKRLLQEAYALLKKMKEDGPLPDSG 501
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 154/389 (39%), Gaps = 62/389 (15%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+A++ MV G P+ + V+ D++L + + + V + N++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEADVVIFNTI 191
Query: 114 VNMYGKCGDLAGAHHVFDRISDR----DHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNV 169
++ K + A ++F + + + V+++S+I+ C + +
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 170 DPTSFTLVSIAHACSNLRDGLSLGKQVHAYTF------RNGDWRTFTNNALVTMYAKLGR 223
+P T ++ A + GK V A R+ D FT N+L+ + R
Sbjct: 252 NPNLVTFNALIDAF------VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 224 IDEAKALFGLFDDK----DLVSWNTVISSLSQNDRFEEAL-LF----------------- 261
+D+AK +F K DL ++NT+I ++ R E+ LF
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 262 ----LYH-------------MLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNT 304
L+H M+ GV PD +T + L + L E+ Y ++ +
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY-MQKS 424
Query: 305 DLIDNSFVGSALVDMYCNCKKADKGRWVFDGI----LRRTVAVWNAMIAGYARNEFDDEA 360
++ + ++ + +++ C K D G +F + ++ V +N MI+G EA
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 484
Query: 361 IKLFIEMVYESDFTPNSTTLSSLLPACVR 389
L +M E P+S T ++L+ A +R
Sbjct: 485 YALLKKM-KEDGPLPDSGTYNTLIRAHLR 512
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/461 (19%), Positives = 193/461 (41%), Gaps = 35/461 (7%)
Query: 210 TNNALVTMYAKLGRIDEAKALFGLFDDKD----LVSWNTVISSLSQNDRFEEALLFLYHM 265
T N L++ Y+ G ++EA L K + ++NTVI+ L ++ ++E A M
Sbjct: 272 TYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM 331
Query: 266 LQSGVRPDGVTLASAL-PACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCK 324
L+SG+ PD T S L AC +++ T K +R+ D++ + S+++ ++
Sbjct: 332 LRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSD--MRSRDVVPDLVCFSSMMSLFTRSG 389
Query: 325 KADKGRWVFDGILRRTV----AVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTL 380
DK F+ + + ++ +I GY R A+ L EM+ + + T
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML-QQGCAMDVVTY 448
Query: 381 SSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD- 439
+++L + K + + + + +R D Y L+D + ++G ++ + +F M
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 440 ---RRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVL 496
R D+V++NT++ G+ G D A + DM S + P ++ ++
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV-----------SKEILPTPISYSILV 557
Query: 497 PGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR--- 553
+ + + + + + +++I Y + G + ++M +
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 554 -NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVD 612
+ I++N LI + +A L ++M E+ + P+ TY +I +
Sbjct: 618 PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGG---LVPDVFTYNSILHGFCRQNQMK 674
Query: 613 EGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKL 653
E + M G+ P Y C+++ + EA+++
Sbjct: 675 EAEVVLRKM-IERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 116/537 (21%), Positives = 226/537 (42%), Gaps = 48/537 (8%)
Query: 223 RIDEAKALFGLFDD----KDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLA 278
+I+ A L L D ++V++ T+I+ + + A M Q G+ PD + +
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 279 SALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILR 338
+ + ML G ++ AL +D V S+ +D+Y V+ +L
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLD-VVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 339 R----TVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFL 394
+ V + +I G ++ EA ++ +++ + P+ T SSL+ +C
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL-KRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 395 DKEGIHGYVVKRGFEKDKYVQNALMDMYSRMG----RIEISKSIFGSMDRRDIVSWNTMI 450
++ ++K G+ D + L+D S+ G + S + G R ++V +N++I
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 451 TGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVL------PGCXXXXX 504
G+ R D+AL + M +KP+ T TV+
Sbjct: 504 DGWCRLNRFDEALKVFRLMG-----------IYGIKPDVATFTTVMRVSIMEDAFCKHMK 552
Query: 505 XXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPT----RNVITWNV 560
++ + K++ DIAV + +I + KC + + F+ + +++T+N
Sbjct: 553 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 612
Query: 561 LIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTY-IAIFAACSHSGMVDEGLNLFH 619
+I Y + +EA +F + PN VT I I C ++ M D + +F
Sbjct: 613 MICGYCSLRRLDEAERIFELLKVT-----PFGPNTVTLTILIHVLCKNNDM-DGAIRMFS 666
Query: 620 TMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSN--MKKVDAWSSLL-GACKI 676
M A G +P++ Y CL+D +S +E ++KL + M + ++S ++ G CK
Sbjct: 667 IM-AEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 725
Query: 677 HQNLEVGEIAAKQL-LVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKE 732
+ E I + + L P+V ++ +L+ Y G +A + + M GV+ +
Sbjct: 726 GRVDEATNIFHQAIDAKLLPDVVAYAILIRG-YCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 104/468 (22%), Positives = 182/468 (38%), Gaps = 89/468 (19%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+A + M G+ PD A+ ++ L +G ++ G V V +S
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG-VKLDVVVFSST 362
Query: 114 VNMYGKCGDLAGAHHVFDRI----SDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNV 169
+++Y K GDLA A V+ R+ + V++ +I C+ +
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
Query: 170 DPTSFTLVSIAHA---CSNLRDGLSL--------------------------GKQVHAYT 200
+P+ T S+ C NLR G +L G +HA
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482
Query: 201 F------RNGDWRTFTNNALVTMYAKLGRIDEAKALF---GLFDDK-DLVSWNTVISSLS 250
F ++ N+L+ + +L R DEA +F G++ K D+ ++ TV+
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI 542
Query: 251 QNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNS 310
D F C H++ G ++ RN D +
Sbjct: 543 MEDAF----------------------------CKHMKP-TIGLQLFDLMQRNKISADIA 573
Query: 311 FVGSALVDMYCNCKKADKGRWVF----DGILRRTVAVWNAMIAGYARNEFDDEAIKLFIE 366
V + ++ + C + + F +G + + +N MI GY DEA ++F E
Sbjct: 574 -VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF-E 631
Query: 367 MVYESDFTPNSTTLSSLLPACVRCKAFLDKEG---IHGYVVKRGFEKDKYVQNALMDMYS 423
++ + F PN+ TL+ L+ V CK D +G + + ++G + + LMD +S
Sbjct: 632 LLKVTPFGPNTVTLTILIH--VLCKNN-DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFS 688
Query: 424 RMGRIEISKSIFGSMDRR----DIVSWNTMITGYVVCGRHDDALNLLH 467
+ IE S +F M + IVS++ +I G GR D+A N+ H
Sbjct: 689 KSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFH 736
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 144/317 (45%), Gaps = 32/317 (10%)
Query: 375 PNSTTLSSLLPACVRCKAFLDKE-GIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKS 433
P+ + + + CK + K H V++RGF N ++ S + +IE++
Sbjct: 214 PSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASR 272
Query: 434 IFGSM----DRRDIVSWNTMITGYVVCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKPN 488
+ + ++V++ T+I G+ G D A +L M QRG ++P+
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG------------IEPD 320
Query: 489 SVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFD 548
+ T++ G ++ + AL + + D+ V S+ ID+Y K G L + +V+
Sbjct: 321 LIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYK 380
Query: 549 QMPTR----NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAA 604
+M + NV+T+ +LI G+ EA ++ +++ + + P+ VTY ++
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL-----KRGMEPSIVTYSSLIDG 435
Query: 605 CSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKL-IKTMPSNMK- 662
G + G L+ M G P Y LVD L + G + A + +K + +++
Sbjct: 436 FCKCGNLRSGFALYEDM-IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 663 KVDAWSSLL-GACKIHQ 678
V ++SL+ G C++++
Sbjct: 495 NVVVFNSLIDGWCRLNR 511
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 197/471 (41%), Gaps = 80/471 (16%)
Query: 238 DLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIH 297
DL ++N VI+ + AL L ML+ G PD VT+ S ++
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSL---------------VN 163
Query: 298 GYALRN-----TDLIDNSF-VG--------SALVDMYCNCKKADKGRWVFDGI----LRR 339
G+ RN L+D +G +A++D C K+ + F I +R
Sbjct: 164 GFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRP 223
Query: 340 TVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGI 399
V + A++ G + +A +L +M+ + TPN T S+LL A V+ L+ + +
Sbjct: 224 NVVTYTALVNGLCNSSRWSDAARLLSDMI-KKKITPNVITYSALLDAFVKNGKVLEAKEL 282
Query: 400 HGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRR----DIVSWNTMITGYVV 455
+V+ + D ++L++ RI+ + +F M + D+VS+NT+I G+
Sbjct: 283 FEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK 342
Query: 456 CGRHDDALNLLHDM-QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAY 514
R +D + L +M QRG L N+VT T++ G E +
Sbjct: 343 AKRVEDGMKLFREMSQRG------------LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 515 ALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR----NVITWNVLIMAYGMHGK 570
++ DI + L+ G L + ++F+ M R +++T+ +I GK
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 571 GEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPS 630
EEA LF + S K ++P+ VTY + + G++ E L+ MK G+ +
Sbjct: 451 VEEAWSLFCSL-----SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK-QEGLMKN 504
Query: 631 SDHYACLVDLLGRSGRVEEAYKLIKTM------PSNMKKVDAWSSLLGACK 675
D G + + +LIK M PS +K + + G CK
Sbjct: 505 --------DCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKS-----GVCK 542
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 132/313 (42%), Gaps = 36/313 (11%)
Query: 358 DEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNA 417
++AI LF +MV F P+ + LL A V+ K + + + G D Y N
Sbjct: 67 NDAIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 418 LMDMYSRMGRIEISKSIFGSMDRR----DIVSWNTMITGYVVCGRHDDALNLLHDMQRGQ 473
+++ + ++ ++ SI G M + D V+ +++ G+ R DA++L+ M
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE-- 183
Query: 474 DDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDM 533
I KP+ V ++ + ++ + ++ +AL++
Sbjct: 184 ---------IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN- 233
Query: 534 YAKCGCLNLSR------IVFDQMP---TRNVITWNVLIMAYGMHGKGEEALELFRRMVAE 584
G N SR ++ D + T NVIT++ L+ A+ +GK EA ELF MV
Sbjct: 234 ----GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV-- 287
Query: 585 KDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRS 644
I P+ VTY ++ +DE +F M + G Y L++ ++
Sbjct: 288 ---RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM-VSKGCLADVVSYNTLINGFCKA 343
Query: 645 GRVEEAYKLIKTM 657
RVE+ KL + M
Sbjct: 344 KRVEDGMKLFREM 356
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/485 (21%), Positives = 203/485 (41%), Gaps = 53/485 (10%)
Query: 209 FTNNALVTMYAKLGRIDEAKALFG----LFDDKDLVSWNTVISSLSQNDRFEEALLFLYH 264
+T N ++ + + + A ++ G L + D ++NT+I L + EA++ +
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR 183
Query: 265 MLQSGVRPDGVTLASALPACSH-------LEMLRTGKEIHGYALRNTDLIDNSFVGSALV 317
M+++G +PD VT S + L++LR +E + A + F S ++
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA--------DVFTYSTII 235
Query: 318 DMYCNCKKADKGRWVFDGI----LRRTVAVWNAMIAGYAR-NEFDDEAIKLFIEMVYESD 372
D C D +F + ++ +V +N+++ G + +++D A L ++ + +
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA--LLLKDMVSRE 293
Query: 373 FTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISK 432
PN T + LL V+ + ++ ++ RG + N LMD Y R+ +
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 433 SIFGSMDRR----DIVSWNTMITGYVVCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKP 487
++ M R DIV++ ++I GY + R DD + + ++ +RG L
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG------------LVA 401
Query: 488 NSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVF 547
N+VT ++ G E+ + + D+ L+D G L + +F
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
Query: 548 DQMPTRN----VITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFA 603
+ + ++ + +I GK E+A LF + K ++PN +TY + +
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC-----KGVKPNVMTYTVMIS 516
Query: 604 ACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKK 663
G + E L M+ + G P+ Y L+ R G + + KLI+ M S
Sbjct: 517 GLCKKGSLSEANILLRKMEED-GNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575
Query: 664 VDAWS 668
DA S
Sbjct: 576 ADASS 580
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/464 (19%), Positives = 177/464 (38%), Gaps = 38/464 (8%)
Query: 55 AISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLV 114
AI+ + M+ + P F A A NL + G A ++ N ++
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH-NIYTLNIMI 130
Query: 115 NMYGKCGDLAGAHHVFDRIS----DRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVD 170
N + +C A+ V ++ + D ++N++I
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 171 PTSFTLVSIAHA-CSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKA 229
P T SI + C + L+L + RN FT + ++ + G ID A +
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLAL-DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 230 LFGLFDDK----DLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACS 285
LF + K +V++N+++ L + ++ + L L M+ + P+ +T L
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 286 HLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRT----V 341
L+ E++ + + N + L+D YC + + + D ++R +
Sbjct: 310 KEGKLQEANELYKEMI-TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368
Query: 342 AVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHG 401
+ ++I GY + D+ +K+F + + N+ T S L+ + E +
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVF-RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 402 YVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRD----IVSWNTMITGYVVCG 457
+V G D L+D G++E + IF + + IV + T+I G G
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 458 RHDDALNLLHDMQRGQDDEYEDDESIP---LKPNSVTLMTVLPG 498
+ +DA NL S+P +KPN +T ++ G
Sbjct: 488 KVEDAWNLFC--------------SLPCKGVKPNVMTYTVMISG 517
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 157/406 (38%), Gaps = 92/406 (22%)
Query: 358 DEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNA 417
D+AI LF EM+ S P+ S A R K F + G + Y N
Sbjct: 70 DDAIALFQEMI-RSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128
Query: 418 LMDMYSRMGRIEISKSIFGSMDRR----DIVSWNTMITGYVVCGRHDDALNLLHDMQRGQ 473
+++ + R + + S+ G + + D ++NT+I G + G+ +A+ L+ M
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN- 187
Query: 474 DDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDM 533
+P+ VT +++ G ++ ++ + D+ S +ID
Sbjct: 188 ----------GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 534 YAKCGCLNLSRIVFDQMPTR---------------------------------------N 554
+ GC++ + +F +M T+ N
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 555 VITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEI----------------------- 591
VIT+NVL+ + GK +EA EL++ M+ S I
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 592 -------RPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRS 644
P+ VT+ ++ VD+G+ +F + + G+ ++ Y+ LV +S
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI-SKRGLVANAVTYSILVQGFCQS 416
Query: 645 GRVEEAYKLIKTMPSN--MKKVDAWSSLL-GAC---KIHQNLEVGE 684
G+++ A +L + M S+ + V + LL G C K+ + LE+ E
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 462
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 140/316 (44%), Gaps = 14/316 (4%)
Query: 62 MVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSLVNMYGKCG 121
M + +P + + + K +A ND ++ H+ K T + N L+ M+ CG
Sbjct: 79 MDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPT-ITFINRLLLMHVSCG 137
Query: 122 DLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVS--- 178
L +FDR+ RD SW +++ C + +F + S
Sbjct: 138 RLDITRQMFDRMPHRDFHSW-AIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWIL 196
Query: 179 --IAHACSNLRDGLSLGKQVHAYTFRNG---DWRTFTNNALVTMYAKLGRIDEAKALFGL 233
+ AC+ +RD LGKQVHA + G + ++ + +L+ Y + +++A +
Sbjct: 197 GCVLKACAMIRD-FELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQ 255
Query: 234 FDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHL-EMLRT 292
+ + V+W +++ + F+E + M G++ + ++ L ACS + + R+
Sbjct: 256 LSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRS 315
Query: 293 GKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRT-VAVWNAMIAGY 351
G+++H A++ + + L++MY K VF T V+ WNAM+A Y
Sbjct: 316 GQQVHANAIK-LGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASY 374
Query: 352 ARNEFDDEAIKLFIEM 367
+N EAIKL +M
Sbjct: 375 MQNGIYIEAIKLLYQM 390
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 8/216 (3%)
Query: 77 VLKAAAGVNDLNLGKQIHGHVFKFGYASTSVA-VANSLVNMYGKCGDLAGAHHVFDRISD 135
VLKA A + D LGKQ+H K G+ + ++ SL+ YG+ L A+ V ++S+
Sbjct: 199 VLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSN 258
Query: 136 RDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQ 195
+ V+W + + R + ++ ACS + DG G+Q
Sbjct: 259 ANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQ 318
Query: 196 VHAYTFRNG-DWRTFTNNALVTMYAKLGRIDEAKALFGLFDDKDLVS-WNTVISSLSQND 253
VHA + G + L+ MY K G++ +A+ +F D+ VS WN +++S QN
Sbjct: 319 VHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNG 378
Query: 254 RFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEM 289
+ EA+ LY M +G++ L A HL+M
Sbjct: 379 IYIEAIKLLYQMKATGIKAHDTLLNEA-----HLQM 409
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 124/301 (41%), Gaps = 21/301 (6%)
Query: 291 RTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAVWNAMIAG 350
R E+ + ++++ +F+ L+ M+ +C + D R +FD + R W + G
Sbjct: 105 RGAHELQVHIMKSSIRPTITFINRLLL-MHVSCGRLDITRQMFDRMPHRDFHSWAIVFLG 163
Query: 351 -YARNEFDDEAIKLFIEMVYESD---FTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKR 406
+++D A LF+ M+ S F S L +L AC + F + +H K
Sbjct: 164 CIEMGDYEDAAF-LFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKL 222
Query: 407 GF--EKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALN 464
GF E+D Y+ +L+ Y +E + + + + V+W +T G + +
Sbjct: 223 GFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIR 282
Query: 465 LLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCX-XXXXXXXXXEIHAYALKQKLATD 523
+M +K N VL C ++HA A+K +D
Sbjct: 283 DFIEMGNH-----------GIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESD 331
Query: 524 IAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVIT-WNVLIMAYGMHGKGEEALELFRRMV 582
+ LI+MY K G + + VF ++ WN ++ +Y +G EA++L +M
Sbjct: 332 CLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMK 391
Query: 583 A 583
A
Sbjct: 392 A 392
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 114/288 (39%), Gaps = 26/288 (9%)
Query: 395 DKEGIHG---YVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMIT 451
D+ G H +++K N L+ M+ GR++I++ +F M RD SW +
Sbjct: 103 DQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFL 162
Query: 452 GYVVCGRHDDA----LNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXX 507
G + G ++DA +++L Q+G K S L VL C
Sbjct: 163 GCIEMGDYEDAAFLFVSMLKHSQKG-----------AFKIPSWILGCVLKACAMIRDFEL 211
Query: 508 XXEIHAYALKQKL--ATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAY 565
++HA K D + +LI Y + CL + +V Q+ N + W +
Sbjct: 212 GKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTND 271
Query: 566 GMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANH 625
G+ +E + F M N I+ N + + ACS H
Sbjct: 272 YREGEFQEVIRDFIEM-----GNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKL 326
Query: 626 GIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGA 673
G E L+++ G+ G+V++A K+ K+ + V W++++ +
Sbjct: 327 GFESDCLIRCRLIEMYGKYGKVKDAEKVFKS-SKDETSVSCWNAMVAS 373
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 208/455 (45%), Gaps = 47/455 (10%)
Query: 340 TVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGI 399
++ N+++ G+ EA+ L +MV E + P++ T ++L+ + + +
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMV-EMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 400 HGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDR----RDIVSWNTMITGYVV 455
+V +G + D A+++ + G +++ ++ M++ D+V ++T+I
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 456 CGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYA 515
DDALNL +M D++ I +P+ T +++ + +
Sbjct: 253 YRHVDDALNLFTEM---------DNKGI--RPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 516 LKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR----NVITWNVLIMAYGMHGKG 571
L++K+ ++ ++LID +AK G L + +FD+M R N++T+N LI + MH +
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 572 EEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSS 631
+EA ++F MV+ K+ P+ VTY + + V +G+ LF M + G+ ++
Sbjct: 362 DEAQQIFTLMVS-----KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM-SRRGLVGNT 415
Query: 632 DHYACLVDLLGRSGRVEEAYKLIKTMPSN--MKKVDAWSSLL-GAC---KIHQNLEVGEI 685
Y L+ ++ + A + K M S+ + +++LL G C K+ + + V E
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 475
Query: 686 AAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVH 745
K +EP++ + Y ++S AG + D+ + GV+ + I + +
Sbjct: 476 LQKS--KMEPDIYT-YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD----VIAYNTMIS 528
Query: 746 KFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDT 780
F K L E L +M+++G +PD+
Sbjct: 529 GFC--------KKGLKEEAYTLFIKMKEDGPLPDS 555
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 132/640 (20%), Positives = 224/640 (35%), Gaps = 121/640 (18%)
Query: 42 HLRLQAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFG 101
HL+L +A+ + MV + P F +L A A + +L V FG
Sbjct: 43 HLKLD-------EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDL-------VISFG 88
Query: 102 YASTSVAVA------NSLVNMYGKCGDLAGAHHVFDRISDRDH----VSWNSMIAAACRF 151
+ V+ N ++N + L+ A + ++ + V+ NS++ C
Sbjct: 89 EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG 148
Query: 152 XXXXXXXXXXXXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTN 211
P + T ++ H V + T
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 212 NALVTMYAKLGRIDEAKALFGLFD----DKDLVSWNTVISSLSQNDRFEEALLFLYHMLQ 267
A++ K G D A L + + D+V ++TVI SL + ++AL M
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 268 SGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKK-A 326
G+RPD F S+L+ CN + +
Sbjct: 269 KGIRPDV------------------------------------FTYSSLISCLCNYGRWS 292
Query: 327 DKGRWVFDGILRR---TVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSL 383
D R + D + R+ V +N++I +A+ EA KLF EM+ S PN T +SL
Sbjct: 293 DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS-IDPNIVTYNSL 351
Query: 384 LPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDI 443
+ + + I +V + D N L++ + + ++ +F M RR +
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL 411
Query: 444 ----VSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
V++ T+I G+ D+A + M S + PN +T T+L G
Sbjct: 412 VGNTVTYTTLIHGFFQASDCDNAQMVFKQMV-----------SDGVHPNIMTYNTLLDGL 460
Query: 500 XXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWN 559
+ Y K K+ DI T+N
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDI-------------------------------YTYN 489
Query: 560 VLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFH 619
++ GK E+ +LF + S K ++P+ + Y + + G+ +E LF
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSL-----SLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFI 544
Query: 620 TMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPS 659
MK + G P S Y L+ R G + +LIK M S
Sbjct: 545 KMKED-GPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 127/583 (21%), Positives = 242/583 (41%), Gaps = 111/583 (19%)
Query: 209 FTNNALVTMYAKLGRIDEAKALFGLFDDK----DLVSWNTVISSLSQNDRFEEALLFLYH 264
FT N L+ + G ID A LF + K ++V++NT+I + + ++ L
Sbjct: 206 FTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRS 265
Query: 265 MLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCK 324
M G+ P+ ++ + + R G+ + + SFV L +M
Sbjct: 266 MALKGLEPNLISYNVVING-----LCREGR-----------MKEVSFV---LTEM----- 301
Query: 325 KADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLL 384
++ + D + +N +I GY + +A+ + EM+ TP+ T +SL+
Sbjct: 302 --NRRGYSLDEV------TYNTLIKGYCKEGNFHQALVMHAEML-RHGLTPSVITYTSLI 352
Query: 385 PACVRCKA--------FLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFG 436
+ CKA FLD+ + RG ++ L+D +S+ G + + +
Sbjct: 353 HS--MCKAGNMNRAMEFLDQMRV------RGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404
Query: 437 SMDRR----DIVSWNTMITGYVVCGRHDDALNLLHDMQR---------------GQDDEY 477
M+ +V++N +I G+ V G+ +DA+ +L DM+ G Y
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 478 EDDESIP---------LKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGS 528
+ DE++ +KP+++T +++ G +++ L+ L D +
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 529 ALIDMYAKCGCLNLSRIVFDQMPTR----NVITWNVLIMAYGMHGKGEEALELFRRMVAE 584
ALI+ Y G L + + ++M + +V+T++VLI + EA L ++ E
Sbjct: 525 ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE 584
Query: 585 KDSNKEIRPNEVTYIAIFAACSH---------------SGMVDEGLNLFHTMKA-NHGIE 628
E P++VTY + CS+ GM+ E +F +M NH +
Sbjct: 585 -----ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH--K 637
Query: 629 PSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLLGACKIHQNLEVGEIAAK 688
P Y ++ R+G + +AY L K M + + + + +H+ +V E+ +
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
Query: 689 QLLVL---EPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMG 728
+ VL E + A +L I G D +D+ +M + G
Sbjct: 698 IVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDG 740
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 181/434 (41%), Gaps = 59/434 (13%)
Query: 340 TVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLD-KEG 398
T +V++ ++ Y+R D+A+ + + + F P + +++L A +R K + E
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSI-VHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAEN 191
Query: 399 IHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRR----DIVSWNTMITGYV 454
+ +++ + + N L+ + G I+++ ++F M+ + ++V++NT+I GY
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 455 VCGRHDDALNLLHDM--------------------QRGQDDE------------YEDDES 482
+ DD LL M + G+ E Y DE
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE- 310
Query: 483 IPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNL 542
VT T++ G +HA L+ L + ++LI K G +N
Sbjct: 311 -------VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNR 363
Query: 543 SRIVFDQMPTR----NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTY 598
+ DQM R N T+ L+ + G EA + R M ++ P+ VTY
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM-----NDNGFSPSVVTY 418
Query: 599 IAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMP 658
A+ +G +++ + + MK G+ P Y+ ++ RS V+EA ++ + M
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEK-GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 477
Query: 659 SNMKKVDA--WSSLL-GACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWD 715
K D +SSL+ G C+ + E ++ + L V P Y L N Y G +
Sbjct: 478 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537
Query: 716 QAMDIRKKMKEMGV 729
+A+ + +M E GV
Sbjct: 538 KALQLHNEMVEKGV 551
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/499 (20%), Positives = 203/499 (40%), Gaps = 73/499 (14%)
Query: 206 WRTFTNNALVTMYAKLGRIDEAKALFGLFDDK----DLVSWNTVISSLSQNDRFEEALLF 261
W + N ++ +LGRI EA L L + K D++S++TV++ + ++
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 262 LYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYC 321
+ M + G++P NS++ +++ + C
Sbjct: 304 IEVMKRKGLKP------------------------------------NSYIYGSIIGLLC 327
Query: 322 NCKKADKGRWVFDGILRRTV----AVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNS 377
K + F ++R+ + V+ +I G+ + A K F EM + D TP+
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM-HSRDITPDV 386
Query: 378 TTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGS 437
T ++++ + ++ + + +G E D L++ Y + G ++ + +
Sbjct: 387 LTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH 446
Query: 438 MDRR----DIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLM 493
M + ++V++ T+I G G D A LLH+M + I L+PN T
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK-----------IGLQPNIFTYN 495
Query: 494 TVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR 553
+++ G ++ L D + L+D Y K G ++ ++ + +M +
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 554 ----NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSG 609
++T+NVL+ + +HG E+ +L M+A K I PN T+ ++
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA-----KGIAPNATTFNSLVKQYCIRN 610
Query: 610 MVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSN--MKKVDAW 667
+ ++ M + G+ P Y LV ++ ++EA+ L + M V +
Sbjct: 611 NLKAATAIYKDM-CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 668 SSLL-GACKIHQNLEVGEI 685
S L+ G K + LE E+
Sbjct: 670 SVLIKGFLKRKKFLEAREV 688
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 152/361 (42%), Gaps = 30/361 (8%)
Query: 341 VAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIH 400
V ++ ++ GY R D+ KL IE++ PNS S++ R + E
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKL-IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 401 GYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDI----VSWNTMITGYVVC 456
++++G D V L+D + + G I + F M RDI +++ +I+G+
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 457 GRHDDALNLLHDMQ-RGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYA 515
G +A L H+M +G L+P+SVT ++ G +H +
Sbjct: 400 GDMVEAGKLFHEMFCKG------------LEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 516 LKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQM----PTRNVITWNVLIMAYGMHGKG 571
++ + ++ + LID K G L+ + + +M N+ T+N ++ G
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 572 EEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSS 631
EEA++L A + + VTY + A SG +D+ + M G++P+
Sbjct: 508 EEAVKLVGEFEAAG-----LNADTVTYTTLMDAYCKSGEMDKAQEILKEM-LGKGLQPTI 561
Query: 632 DHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDA--WSSLLGACKIHQNLEVGEIAAKQ 689
+ L++ G +E+ KL+ M + +A ++SL+ I NL+ K
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 690 L 690
+
Sbjct: 622 M 622
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 144/332 (43%), Gaps = 40/332 (12%)
Query: 416 NALMDMYSRMGRIEISKSIFGSMDRR----DIVSWNTMITGYVVCGRHDDALNLLHDMQR 471
N ++ ++GRI+ + + M+ + D++S++T++ GY G D L+ M+R
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 472 GQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALI 531
LKPNS +++ E + ++Q + D V + LI
Sbjct: 310 KG-----------LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 532 DMYAKCGCLNLSRIVFDQMPTR----NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDS 587
D + K G + + F +M +R +V+T+ +I + G EA +LF M
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC---- 414
Query: 588 NKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRV 647
K + P+ VT+ + +G + + + H G P+ Y L+D L + G +
Sbjct: 415 -KGLEPDSVTFTELINGYCKAGHMKDAFRV-HNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 648 EEAYKLIKTM--PSNMKKVDAWSSLL-GACKIHQNLE-----VGEIAAKQLLVLEPNVAS 699
+ A +L+ M + ++S++ G CK N+E VGE A L N +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCK-SGNIEEAVKLVGEFEAAGL-----NADT 526
Query: 700 -HYVLLSNIYSSAGLWDQAMDIRKKMKEMGVR 730
Y L + Y +G D+A +I K+M G++
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 102/505 (20%), Positives = 189/505 (37%), Gaps = 65/505 (12%)
Query: 106 SVAVANSLVNMYGKCGDLAGAHHVFDRISDR----DHVSWNSMIAAACRFXXXXXXXXXX 161
+VA N +++ + G + AHH+ + + D +S+++++ CRF
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 162 XXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWR-TFTNNALVTMYAK 220
+ P S+ SI + L+ ++ + R G T L+ + K
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICK-LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 221 LGRIDEAKALFGLFDDKDL----VSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVT 276
G I A F +D+ +++ +IS Q EA + M G+ PD VT
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 277 LASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI 336
I+GY + + D V + ++ C+
Sbjct: 424 FTEL---------------INGYC-KAGHMKDAFRVHNHMIQAGCS-------------- 453
Query: 337 LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDK 396
V + +I G + D A +L EM ++ PN T +S++ + +
Sbjct: 454 --PNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 397 EGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI----EISKSIFGSMDRRDIVSWNTMITG 452
+ G G D LMD Y + G + EI K + G + IV++N ++ G
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 453 YVVCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEI 511
+ + G +D LL+ M +G + PN+ T +++ I
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKG------------IAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 512 HAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR----NVITWNVLIMAYGM 567
+ + + D L+ + K + + +F +M + +V T++VLI +
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 568 HGKGEEALELFRRMVAEK-DSNKEI 591
K EA E+F +M E ++KEI
Sbjct: 679 RKKFLEAREVFDQMRREGLAADKEI 703
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/499 (20%), Positives = 203/499 (40%), Gaps = 73/499 (14%)
Query: 206 WRTFTNNALVTMYAKLGRIDEAKALFGLFDDK----DLVSWNTVISSLSQNDRFEEALLF 261
W + N ++ +LGRI EA L L + K D++S++TV++ + ++
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 262 LYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYC 321
+ M + G++P NS++ +++ + C
Sbjct: 304 IEVMKRKGLKP------------------------------------NSYIYGSIIGLLC 327
Query: 322 NCKKADKGRWVFDGILRRTV----AVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNS 377
K + F ++R+ + V+ +I G+ + A K F EM + D TP+
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM-HSRDITPDV 386
Query: 378 TTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGS 437
T ++++ + ++ + + +G E D L++ Y + G ++ + +
Sbjct: 387 LTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH 446
Query: 438 MDRR----DIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLM 493
M + ++V++ T+I G G D A LLH+M + I L+PN T
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK-----------IGLQPNIFTYN 495
Query: 494 TVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR 553
+++ G ++ L D + L+D Y K G ++ ++ + +M +
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 554 ----NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSG 609
++T+NVL+ + +HG E+ +L M+A K I PN T+ ++
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA-----KGIAPNATTFNSLVKQYCIRN 610
Query: 610 MVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSN--MKKVDAW 667
+ ++ M + G+ P Y LV ++ ++EA+ L + M V +
Sbjct: 611 NLKAATAIYKDM-CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 668 SSLL-GACKIHQNLEVGEI 685
S L+ G K + LE E+
Sbjct: 670 SVLIKGFLKRKKFLEAREV 688
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 152/361 (42%), Gaps = 30/361 (8%)
Query: 341 VAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIH 400
V ++ ++ GY R D+ KL IE++ PNS S++ R + E
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKL-IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 401 GYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDI----VSWNTMITGYVVC 456
++++G D V L+D + + G I + F M RDI +++ +I+G+
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 457 GRHDDALNLLHDMQ-RGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYA 515
G +A L H+M +G L+P+SVT ++ G +H +
Sbjct: 400 GDMVEAGKLFHEMFCKG------------LEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 516 LKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQM----PTRNVITWNVLIMAYGMHGKG 571
++ + ++ + LID K G L+ + + +M N+ T+N ++ G
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 572 EEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSS 631
EEA++L A + + VTY + A SG +D+ + M G++P+
Sbjct: 508 EEAVKLVGEFEAAG-----LNADTVTYTTLMDAYCKSGEMDKAQEILKEM-LGKGLQPTI 561
Query: 632 DHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDA--WSSLLGACKIHQNLEVGEIAAKQ 689
+ L++ G +E+ KL+ M + +A ++SL+ I NL+ K
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 690 L 690
+
Sbjct: 622 M 622
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 144/332 (43%), Gaps = 40/332 (12%)
Query: 416 NALMDMYSRMGRIEISKSIFGSMDRR----DIVSWNTMITGYVVCGRHDDALNLLHDMQR 471
N ++ ++GRI+ + + M+ + D++S++T++ GY G D L+ M+R
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 472 GQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALI 531
LKPNS +++ E + ++Q + D V + LI
Sbjct: 310 KG-----------LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 532 DMYAKCGCLNLSRIVFDQMPTR----NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDS 587
D + K G + + F +M +R +V+T+ +I + G EA +LF M
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC---- 414
Query: 588 NKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRV 647
K + P+ VT+ + +G + + + H G P+ Y L+D L + G +
Sbjct: 415 -KGLEPDSVTFTELINGYCKAGHMKDAFRV-HNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 648 EEAYKLIKTM--PSNMKKVDAWSSLL-GACKIHQNLE-----VGEIAAKQLLVLEPNVAS 699
+ A +L+ M + ++S++ G CK N+E VGE A L N +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCK-SGNIEEAVKLVGEFEAAGL-----NADT 526
Query: 700 -HYVLLSNIYSSAGLWDQAMDIRKKMKEMGVR 730
Y L + Y +G D+A +I K+M G++
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 102/505 (20%), Positives = 189/505 (37%), Gaps = 65/505 (12%)
Query: 106 SVAVANSLVNMYGKCGDLAGAHHVFDRISDR----DHVSWNSMIAAACRFXXXXXXXXXX 161
+VA N +++ + G + AHH+ + + D +S+++++ CRF
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 162 XXXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWR-TFTNNALVTMYAK 220
+ P S+ SI + L+ ++ + R G T L+ + K
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICK-LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 221 LGRIDEAKALFGLFDDKDL----VSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVT 276
G I A F +D+ +++ +IS Q EA + M G+ PD VT
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 277 LASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI 336
I+GY + + D V + ++ C+
Sbjct: 424 FTEL---------------INGYC-KAGHMKDAFRVHNHMIQAGCS-------------- 453
Query: 337 LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDK 396
V + +I G + D A +L EM ++ PN T +S++ + +
Sbjct: 454 --PNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 397 EGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI----EISKSIFGSMDRRDIVSWNTMITG 452
+ G G D LMD Y + G + EI K + G + IV++N ++ G
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 453 YVVCGRHDDALNLLHDM-QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEI 511
+ + G +D LL+ M +G + PN+ T +++ I
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKG------------IAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 512 HAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR----NVITWNVLIMAYGM 567
+ + + D L+ + K + + +F +M + +V T++VLI +
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 568 HGKGEEALELFRRMVAEK-DSNKEI 591
K EA E+F +M E ++KEI
Sbjct: 679 RKKFLEAREVFDQMRREGLAADKEI 703
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 125/556 (22%), Positives = 242/556 (43%), Gaps = 91/556 (16%)
Query: 238 DLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGK--E 295
D+ S+NTVI + E+AL M SG VT + A + GK E
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDA-----FCKAGKMDE 230
Query: 296 IHGY--ALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRR----TVAVWNAMIA 349
G+ ++ L + V ++L+ +C+C + D+G+ +FD +L R +N +I
Sbjct: 231 AMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR 290
Query: 350 GYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIH--GYVVKRG 407
G+ + EA ++F E + E PN T + L+ C KE + ++++
Sbjct: 291 GFCKLGQLKEASEIF-EFMIERGVRPNVYTYTGLIDGL--CGVGKTKEALQLLNLMIEKD 347
Query: 408 FEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRR----DIVSWNTMITGYVVCGRHDDAL 463
E + N +++ + G + + I M +R D +++N ++ G G D+A
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 464 NLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATD 523
LL+ M + D Y D P+ ++ + IH + +L
Sbjct: 408 KLLYLMLK--DSSYTD-------PDVISYNAL---------------IHGLCKENRLHQ- 442
Query: 524 IAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVA 583
L++ ++ +++ + +T N+L+ + G +A+EL++++
Sbjct: 443 ---------------ALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI-- 485
Query: 584 EKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGR 643
S+ +I N TY A+ +GM++ L M+ + ++PS Y CL+ L +
Sbjct: 486 ---SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE-LQPSVFDYNCLLSSLCK 541
Query: 644 SGRVEEAYKLIKTMP--SNMKKVDAWSSLLGACKIHQNLEVGEI-AAKQLLV------LE 694
G +++A++L + M +N V +++ + I +L+ G+I +A+ LLV L
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIM-----IDGSLKAGDIKSAESLLVGMSRAGLS 596
Query: 695 PNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFLAGDASH 754
P++ + Y L N + G D+A+ KM + G EP D V K+ S
Sbjct: 597 PDLFT-YSKLINRFLKLGYLDEAISFFDKMVDSGF--EPDAHIC---DSVLKYC---ISQ 647
Query: 755 PQSKELHEYLENLLQR 770
++ +L E ++ L+ +
Sbjct: 648 GETDKLTELVKKLVDK 663
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 168/436 (38%), Gaps = 109/436 (25%)
Query: 304 TDLIDNSFVGSALVDMYCNCKKADKGRWVFDGILRRTVAV----WNAMIAGYARNEFDDE 359
TD N S L++ Y +K V +L+R A N ++ G RN +
Sbjct: 101 TDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGK 160
Query: 360 AIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGY-VVKRGFEKDKYVQNAL 418
A+ L EM +SL+P + Y V RGF + K ++ AL
Sbjct: 161 AVSLLREM-----------RRNSLMP------------DVFSYNTVIRGFCEGKELEKAL 197
Query: 419 MDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYE 478
E++ + GS +V+W +I + G+ D+A+ L +M+
Sbjct: 198 ----------ELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKF------- 240
Query: 479 DDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCG 538
L D+ V ++LI + CG
Sbjct: 241 ---------------------------------------MGLEADLVVYTSLIRGFCDCG 261
Query: 539 CLNLSRIVFDQMPTRN----VITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPN 594
L+ + +FD++ R IT+N LI + G+ +EA E+F M+ + +RPN
Sbjct: 262 ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI-----ERGVRPN 316
Query: 595 EVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLI 654
TY + G E L L + M EP++ Y +++ L + G V +A +++
Sbjct: 317 VYTYTGLIDGLCGVGKTKEALQLLNLM-IEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375
Query: 655 KTMPSNMKKVD--AWSSLLGACKIHQNLEVGEIAAKQLLVL--------EPNVASHYVLL 704
+ M + D ++ LLG +L+ A +LL L +P+V S+ L+
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLD----EASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 705 SNIYSSAGLWDQAMDI 720
+ L QA+DI
Sbjct: 432 HGLCKENRL-HQALDI 446
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/406 (19%), Positives = 171/406 (42%), Gaps = 31/406 (7%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+A+ M G+ D + ++++ +L+ GK + V + G + ++ N+L
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY-NTL 288
Query: 114 VNMYGKCGDLAGAHHVFDRISDR----DHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNV 169
+ + K G L A +F+ + +R + ++ +I C +
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 170 DPTSFTL-VSIAHACSNLRDGLSLG--KQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDE 226
+P + T + I C +DGL + V R T N L+ G +DE
Sbjct: 349 EPNAVTYNIIINKLC---KDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405
Query: 227 AKALFGL------FDDKDLVSWNTVISSLSQNDRFEEAL---LFLYHMLQSGVR-PDGVT 276
A L L + D D++S+N +I L + +R +AL L L +G R +
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465
Query: 277 LASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGI 336
L S L A + + K+I ++ ++ NS +A++D +C + + + +
Sbjct: 466 LNSTLKAGDVNKAMELWKQIS-----DSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM 520
Query: 337 ----LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKA 392
L+ +V +N +++ + D+A +LF EM +++F P+ + + ++ ++
Sbjct: 521 RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF-PDVVSFNIMIDGSLKAGD 579
Query: 393 FLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSM 438
E + + + G D + + L++ + ++G ++ + S F M
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 129/648 (19%), Positives = 265/648 (40%), Gaps = 129/648 (19%)
Query: 197 HAYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALFGLFDDK----DLVSWNTVISSLSQN 252
++ +GD+R N L + + ++D+A LFG +V +N ++S++++
Sbjct: 41 RSFASASGDYREILRNRL----SDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKM 96
Query: 253 DRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFV 312
++FE + M G+ D ++ Y
Sbjct: 97 NKFELVISLGEQMQTLGISHD----------------------LYTY------------- 121
Query: 313 GSALVDMYCNCKKADKGRWVFDGILR----RTVAVWNAMIAGYARNEFDDEAIKLFIEMV 368
S ++ +C + V +++ + ++++ GY ++ +A+ L +MV
Sbjct: 122 -SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 369 YESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI 428
E + P++ T ++L+ + + +V+RG + D +++ + G I
Sbjct: 181 -EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 429 EISKSIFGSMD----RRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIP 484
+++ ++ M+ + ++V +NT+I + A++L +M E+
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM-----------ETKG 288
Query: 485 LKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSR 544
++PN VT +++ + + L++K+ ++ +ALID + K G L +
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Query: 545 IVFDQMPTRNV----ITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIA 600
+ ++M R++ IT+N+LI + MH + +EA ++F+ MV+ K+ PN TY
Sbjct: 349 KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS-----KDCLPNIQTYNT 403
Query: 601 IFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSN 660
+ V++G+ LF M + G+ ++ Y ++ ++G + A + K M SN
Sbjct: 404 LINGFCKCKRVEDGVELFREM-SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN 462
Query: 661 MKKVD--AWSSLL-GACK------------------------IHQNLEVGEIAAKQL--- 690
D +S LL G C I+ + G A ++
Sbjct: 463 RVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA 522
Query: 691 ------LVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEV 744
L ++P+V ++ ++S + S L +A D+ +KMKE G G R +
Sbjct: 523 WDLFCSLSIKPDVVTYNTMISGL-CSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANL 581
Query: 745 HKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPDTSCV------LHD 786
D S E L++ MR G+V D S + LHD
Sbjct: 582 R-----DCDRAASAE-------LIKEMRSSGFVGDASTISLVTNMLHD 617
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 154/381 (40%), Gaps = 49/381 (12%)
Query: 54 QAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVANSL 113
+A++ MV G PD + V+ D++L + + + +V + N++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM-EAARIKANVVIFNTI 264
Query: 114 VNMYGKCGDLAGAHHVFDRISDR----DHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNV 169
++ K + A +F + + + V++NS+I C + +
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Query: 170 DPTSFTLVSIAHACSNLRDG-LSLGKQVHAYTF-RNGDWRTFTNNALVTMYAKLGRIDEA 227
+P T ++ A ++G L +++H R+ D T T N L+ + R+DEA
Sbjct: 325 NPNVVTFNALIDAF--FKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA 382
Query: 228 KALFGLFDDKDLV----SWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPA 283
K +F KD + ++NT+I+ + R E+ + M Q G+ + VT + +
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 284 ------CSHLEML-------RTGKEIHGYA---------------------LRNTDLIDN 309
C +M+ R +I Y+ L+ +++ N
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN 502
Query: 310 SFVGSALVDMYCNCKKADKGRWVFDGI-LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMV 368
F+ + +++ C K + +F + ++ V +N MI+G EA LF +M
Sbjct: 503 IFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKM- 561
Query: 369 YESDFTPNSTTLSSLLPACVR 389
E PNS T ++L+ A +R
Sbjct: 562 KEDGTLPNSGTYNTLIRANLR 582
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 115/518 (22%), Positives = 202/518 (38%), Gaps = 74/518 (14%)
Query: 238 DLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSH----------- 286
++V + T+I + QN RF +A+ L M + G+ PD S + S
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 287 LEMLRTGKE---------IHGY--------------ALRNTDLIDNSFVGSALVDMYCNC 323
+EM+ G + I GY +R ++ N + + L++ YC
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 324 KKADKG----RWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTT 379
K + R + D + + ++ G +N+ D+A ++F EM + P+ +
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG-IAPDVFS 629
Query: 380 LSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD 439
L+ + I +V+ G + + N L+ + R G IE +K + M
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 440 RRDI----VSWNTMITGYVVCGRHDDALNLLHDMQ-RGQDDEYEDDESIPLKPNSVTLMT 494
+ + V++ T+I GY G +A L +M+ +G L P+S T
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG------------LVPDSFVYTT 737
Query: 495 VLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIV-------- 546
++ GC I K+ A+ A +ALI+ K G L V
Sbjct: 738 LVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796
Query: 547 FDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACS 606
FD+ N +T+N++I G E A ELF +M N + P +TY ++
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM-----QNANLMPTVITYTSLLNGYD 851
Query: 607 HSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVDA 666
G E +F A GIEP Y+ +++ + G +A L+ M + D
Sbjct: 852 KMGRRAEMFPVFDEAIA-AGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDG 910
Query: 667 WSSLLGACK--IHQNLEVGEIAAKQLLVLEPNVASHYV 702
+ C+ + +VGE+ + V+E V Y+
Sbjct: 911 CKLSISTCRALLSGFAKVGEMEVAE-KVMENMVRLQYI 947
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/465 (18%), Positives = 188/465 (40%), Gaps = 35/465 (7%)
Query: 209 FTNNALVTMYAKLGRIDEAKALFGLFDDK----DLVSWNTVISSLSQNDRFEEALLFLYH 264
+T + L+ K+ R+++AK+L D D +++ +I L + + A ++
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337
Query: 265 MLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCK 324
M+ G+ + S ++ K + + + LI + ++L++ YC K
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD-GMIASGLIPQAQAYASLIEGYCREK 396
Query: 325 KADKGRWVFDGILRRTVAV----WNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTL 380
+G + + +R + + + ++ G + D A + EM+ S PN
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI-ASGCRPNVVIY 455
Query: 381 SSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD- 439
++L+ ++ F D + + ++G D + N+L+ S+ R++ ++S M
Sbjct: 456 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 440 ---RRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVL 496
+ + ++ I+GY+ A + +M+ + PN V ++
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE-----------CGVLPNKVLCTGLI 564
Query: 497 PGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR--- 553
+ + Q + D + L++ K ++ + +F +M +
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624
Query: 554 -NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVD 612
+V ++ VLI + G ++A +F MV E + PN + Y + SG ++
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG-----LTPNVIIYNMLLGGFCRSGEIE 679
Query: 613 EGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTM 657
+ L M G+ P++ Y ++D +SG + EA++L M
Sbjct: 680 KAKELLDEMSV-KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 133/707 (18%), Positives = 279/707 (39%), Gaps = 84/707 (11%)
Query: 52 FLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLGKQIHGHVFKFGYASTSVAVAN 111
F A+ + +MV+ G+ PD + + V+++ + DL+ K++ H+ G
Sbjct: 208 FGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATG---------- 257
Query: 112 SLVNMYGKCGDLAGAHHVFDRISDRDHVSWNSMIAAACRFXXXXXXXXXXXXXXXXNVDP 171
D + V +N +I C+ ++ P
Sbjct: 258 ----------------------CDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKP 295
Query: 172 TSFTLVSIAHACSNLRD---GLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLGRIDEAK 228
T ++ + +++ GL + ++ F + ++LV K G+I+EA
Sbjct: 296 DVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAV---SSLVEGLRKRGKIEEAL 352
Query: 229 AL------FGLFDDKDLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALP 282
L FG+ +L +N +I SL + +F EA L M + G+RP+ VT + +
Sbjct: 353 NLVKRVVDFGV--SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID 410
Query: 283 ACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRW----VFDGILR 338
L T G + +T L + + ++L++ +C + + L
Sbjct: 411 MFCRRGKLDTALSFLG-EMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE 469
Query: 339 RTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEG 398
TV + +++ GY ++A++L+ EM + P+ T ++LL R D
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG-IAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 399 IHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIV----SWNTMITGYV 454
+ + + + ++ N +++ Y G + + M + IV S+ +I G
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 455 VCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAY 514
+ G+ +A + + +G + N + +L G +
Sbjct: 589 LTGQASEAKVFVDGLHKGN-----------CELNEICYTGLLHGFCREGKLEEALSVCQE 637
Query: 515 ALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNV----ITWNVLIMAYGMHGK 570
+++ + D+ LID K L + +M R + + + +I A G
Sbjct: 638 MVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD 697
Query: 571 GEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPS 630
+EA ++ M+ N+ PNEVTY A+ +G V+E L M+ + P+
Sbjct: 698 FKEAFGIWDLMI-----NEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV-PN 751
Query: 631 SDHYACLVDLLGRSGRV--EEAYKLIKTMPSNMKKVDAWSSLL--GACKIHQNLEVGEIA 686
Y C +D+L + G V ++A +L + + A ++L G C+ + E E+
Sbjct: 752 QVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELI 810
Query: 687 AKQLL-VLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKE 732
+ + + P+ ++ +++ + + +A+++ M E G+R +
Sbjct: 811 TRMIGDGVSPDCITYTTMINELCRRNDV-KKAIELWNSMTEKGIRPD 856
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 190/452 (42%), Gaps = 48/452 (10%)
Query: 344 WNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYV 403
++ +I Y R+ + + +F M+ + P TLS+LL V+ + F + +
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 404 VKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRR----DIVSWNTMITGYVVCGRH 459
V G D Y+ ++ + + +K + M+ +IV +N +I G +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 460 DDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQK 519
+A+ + D+ G+D LKP+ VT T++ G E+ L +
Sbjct: 279 WEAVGIKKDLA-GKD----------LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLR 327
Query: 520 LATDIAVGSALIDMYAKCG----CLNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEAL 575
+ A S+L++ K G LNL + V D + N+ +N LI + K EA
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAE 387
Query: 576 ELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYA 635
LF RM +RPN+VTY + G +D L+ M + G++ S Y
Sbjct: 388 LLFDRM-----GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM-VDTGLKLSVYPYN 441
Query: 636 CLVDLLGRSGRVEEAYKLIKTMPSNM--KKVDAWSSLLGA-C---KIHQNLEV-GEIAAK 688
L++ + G + A + M + V ++SL+G C KI++ L + E+ K
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Query: 689 QLLVLEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSWIEHRDEVHKFL 748
+ P++ + LLS ++ AGL A+ + +M E V+ +R + +
Sbjct: 502 G---IAPSIYTFTTLLSGLF-RAGLIRDAVKLFNEMAEWNVKP--------NRVTYNVMI 549
Query: 749 AGDASHPQSKELHEYLENLLQRMRKEGYVPDT 780
G + E+ L+ M ++G VPDT
Sbjct: 550 EGYCEEGDMSKAFEF----LKEMTEKGIVPDT 577
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 91/495 (18%), Positives = 189/495 (38%), Gaps = 69/495 (13%)
Query: 214 LVTMYAKLGRIDEAKALFGLFDDK-----DLVSWNTVISSLSQNDRFEEALLFLYHMLQS 268
L+ Y + R+ + +F + K ++ + + ++ L + F A+ M+
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 269 GVRPDGVTLASALPACSHLEMLRTGKEIHGYA---------------------------- 300
G+RPD + + L+ L KE+ +
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 301 ------LRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGIL----RRTVAVWNAMIAG 350
L DL + LV C ++ + G + D +L + A ++++ G
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341
Query: 351 YARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEK 410
+ +EA+ L ++ V + +PN ++L+ + + + F + E + + K G
Sbjct: 342 LRKRGKIEEALNL-VKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRP 400
Query: 411 DKYVQNALMDMYSRMGRIEISKSIFGSMD----RRDIVSWNTMITGYVVCGRHDDALNLL 466
+ + L+DM+ R G+++ + S G M + + +N++I G+ G A +
Sbjct: 401 NDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFM 460
Query: 467 HDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAV 526
+M + L+P VT +++ G ++ + +A I
Sbjct: 461 AEMINKK-----------LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 527 GSALIDMYAKCGCLNLSRIVFDQMPTRNV----ITWNVLIMAYGMHGKGEEALELFRRMV 582
+ L+ + G + + +F++M NV +T+NV+I Y G +A E + M
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM- 568
Query: 583 AEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLG 642
+ K I P+ +Y + +G E +F E + Y L+
Sbjct: 569 ----TEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFC 623
Query: 643 RSGRVEEAYKLIKTM 657
R G++EEA + + M
Sbjct: 624 REGKLEEALSVCQEM 638
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 117/524 (22%), Positives = 214/524 (40%), Gaps = 65/524 (12%)
Query: 209 FTNNALVTMYAKLGRIDEAKALFGLFDDKDLVS----WNTVISSLSQNDRFEEALLFLYH 264
FT ++ + + ID A +L V + T+I SLS+ +R EAL L
Sbjct: 218 FTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEE 277
Query: 265 MLQSGVRPDGVTLASA-LPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNC 323
M G PD T L C + K ++ +R D ++ L++ C
Sbjct: 278 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITY--GYLMNGLCKI 335
Query: 324 KKADKGRWVFDGILRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSL 383
+ D + +F I + + ++N +I G+ + D+A + +MV P+ T +SL
Sbjct: 336 GRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
Query: 384 LPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDI 443
+ KEG+ G ++ L DM ++ + ++
Sbjct: 396 IYG-------YWKEGLVGLALE-----------VLHDMRNKGC-------------KPNV 424
Query: 444 VSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXX 503
S+ ++ G+ G+ D+A N+L++M LKPN+V ++
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADG-----------LKPNTVGFNCLISAFCKEH 473
Query: 504 XXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCG----CLNLSRIVFDQMPTRNVITWN 559
EI ++ D+ ++LI + L L R + + N +T+N
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 560 VLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFH 619
LI A+ G+ +EA +L MV + +E+TY ++ +G VD+ +LF
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSP-----LDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 620 TMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMP--SNMKKVDAWSSLL-GACKI 676
M G PS+ L++ L RSG VEEA + K M + + ++SL+ G C+
Sbjct: 589 KM-LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 677 HQNLEVGEIAAKQLLV--LEPNVASHYVLLSNIYSSAGLWDQAM 718
+ +E G ++L + P+ + L+S + ++D +
Sbjct: 648 GR-IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACL 690
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 178/391 (45%), Gaps = 26/391 (6%)
Query: 342 AVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHG 401
++ +I ++ +EA++L EM + P++ T + ++ + + +
Sbjct: 253 VIYQTLIHSLSKCNRVNEALQLLEEM-FLMGCVPDAETFNDVILGLCKFDRINEAAKMVN 311
Query: 402 YVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVCGRHDD 461
++ RGF D LM+ ++GR++ +K +F + + +IV +NT+I G+V GR DD
Sbjct: 312 RMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDD 371
Query: 462 ALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLA 521
A +L DM S + P+ T +++ G E+ +
Sbjct: 372 AKAVLSDMV----------TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCK 421
Query: 522 TDIAVGSALIDMYAKCGCLNLSRIVFDQMPT----RNVITWNVLIMAYGMHGKGEEALEL 577
++ + L+D + K G ++ + V ++M N + +N LI A+ + EA+E+
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 578 FRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACL 637
FR M K +P+ T+ ++ + + L L M + G+ ++ Y L
Sbjct: 482 FREM-----PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM-ISEGVVANTVTYNTL 535
Query: 638 VDLLGRSGRVEEAYKLIKTMPSNMKKVD--AWSSLL-GACKIHQNLEVGEIAAKQLL-VL 693
++ R G ++EA KL+ M +D ++SL+ G C+ + + + K L
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 694 EPNVASHYVLLSNIYSSAGLWDQAMDIRKKM 724
P+ S +L++ + S G+ ++A++ +K+M
Sbjct: 596 APSNISCNILINGLCRS-GMVEEAVEFQKEM 625
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 120/588 (20%), Positives = 236/588 (40%), Gaps = 45/588 (7%)
Query: 107 VAVANSLVNMYGKCGDLAGAHHVF-DRISDR---DHVSWNSMIAAACRFXXXXXXXXXXX 162
+ N+L+N + G + V+ + + D+ + ++N M+ C+
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 163 XXXXXNVDPTSFTLVSIAHACSNLRDGLSLGKQVHAYTFRNGDWRTFTNNALVTMYAKLG 222
+DP FT S+ +D S K + + L+
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 223 RIDEAKALFGLFDDKD----LVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLA 278
RIDEA LF D + + ++ +I SL ++R EAL + M ++G++P+ T
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 279 SALPA-CSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGIL 337
+ + CS + +E+ G L L+ N +AL++ YC + V + +
Sbjct: 363 VLIDSLCSQCK-FEKARELLGQMLEK-GLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 338 RRTVA----VWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAF 393
R ++ +N +I GY ++ +A+ + +M+ E P+ T +SL+ R F
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKML-ERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 394 LDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRR----DIVSWNTM 449
+ + RG D++ +++D + R+E + +F S++++ ++V + +
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 450 ITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXX 509
I GY G+ D+A +L M S PNS+T ++ G
Sbjct: 539 IDGYCKAGKVDEAHLMLEKML-----------SKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 510 EIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTR----NVITWNVLIMAY 565
+ +K L ++ + LI K G + + F QM + + T+ I Y
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 566 GMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANH 625
G+ +A ++ +M + P+ TY ++ G + ++ M+ +
Sbjct: 648 CREGRLLDAEDMMAKM-----RENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR-DT 701
Query: 626 GIEPSSDHYACLVD--LLGRSGRVEEAYKLIKTMPSNMKKVDAWSSLL 671
G EPS + L+ L + G+ + + + M SNM + D LL
Sbjct: 702 GCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAM-SNMMEFDTVVELL 748
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 115/586 (19%), Positives = 241/586 (41%), Gaps = 119/586 (20%)
Query: 212 NALVTMYAKLGRIDEAKALF-GLFDDK---DLVSWNTVISSLSQNDRFEEALLFLYHMLQ 267
N L+ A+ G +DE K ++ + +DK ++ ++N +++ + EEA ++ +++
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 268 SGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNCKKAD 327
+G+ PD F ++L+ YC K D
Sbjct: 247 AGLDPD------------------------------------FFTYTSLIMGYCQRKDLD 270
Query: 328 KGRWVFDGI----LRRTVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSL 383
VF+ + RR + +I G DEA+ LF++M + F P T + L
Sbjct: 271 SAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF-PTVRTYTVL 329
Query: 384 LPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRR-- 441
+ + + + + + + G + + + L+D + E ++ + G M +
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 442 --DIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGC 499
+++++N +I GY G +DA++++ M ES L PN+ T
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELM-----------ESRKLSPNTRTY------- 431
Query: 500 XXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLN--LSRIVFDQMPTRNVIT 557
++ G +++ G LN L R V +V+T
Sbjct: 432 ----------------------NELIKGYCKSNVHKAMGVLNKMLERKVLP-----DVVT 464
Query: 558 WNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNL 617
+N LI G + A L M +++ + P++ TY ++ + S V+E +L
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLM-----NDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 618 FHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSN--MKKVDAWSSLL-GAC 674
F +++ G+ P+ Y L+D ++G+V+EA+ +++ M S + +++L+ G C
Sbjct: 520 FDSLE-QKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 675 KIHQNLEVGEIAAKQLLV-LEPNVASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEP 733
+ E + K + + L+P V++ +L+ + G +D A ++M G +
Sbjct: 579 ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD-GDFDHAYSRFQQMLSSGTKP-- 635
Query: 734 GCSWIEHRDEVHKFLAGDASHPQSKELHEYLENLLQRMRKEGYVPD 779
+ H + ++ + L + E+++ +MR+ G PD
Sbjct: 636 ---------DAHTYTTFIQTYCREGRLLD-AEDMMAKMRENGVSPD 671
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 174/437 (39%), Gaps = 37/437 (8%)
Query: 238 DLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIH 297
D++ +N +I + Q +++EA +L+S P T A + A ++ E+
Sbjct: 176 DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERA-EVV 234
Query: 298 GYALRNTDLIDNSFVGSALVDMYCNCKKADKGRW-----VFDGILR----RTVAVWNAMI 348
++N + + +G + + Y KG VF + R T +N MI
Sbjct: 235 LVEMQNHHVSPKT-IGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 293
Query: 349 AGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGF 408
Y + + KL+ EM PN T ++L+ A R E I + + G
Sbjct: 294 NLYGKASKSYMSWKLYCEM-RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 352
Query: 409 EKDKYVQNALMDMYSRMGRIEISKSIFGSMD----RRDIVSWNTMITGYVVCGRHDDALN 464
E D YV NALM+ YSR G + IF M D S+N M+ Y G H DA
Sbjct: 353 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEA 412
Query: 465 LLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDI 524
+ +M+R + + P + M +L I + + D
Sbjct: 413 VFEEMKR-----------LGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 461
Query: 525 AVGSALIDMYAKCGCLNLSRIVFDQMP----TRNVITWNVLIMAYGMHGKGEEALELFRR 580
V ++++++Y + G + +M T ++ T+N+LI YG G E ELF
Sbjct: 462 FVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVE 521
Query: 581 MVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDL 640
+ K RP+ VT+ + A S + + L +F M + G P L+
Sbjct: 522 L-----KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM-IDSGCAPDGGTAKVLLSA 575
Query: 641 LGRSGRVEEAYKLIKTM 657
+VE+ +++TM
Sbjct: 576 CSSEEQVEQVTSVLRTM 592
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 169/432 (39%), Gaps = 83/432 (19%)
Query: 324 KKADKGRWVFDGILRRT-----VAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNST 378
KK D V + ILR++ V +N +I Y + EA L+++++ ES + P
Sbjct: 155 KKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLL-ESRYVPTED 213
Query: 379 TLSSLLPA-CV-----RCKAFLDKEGIHGYVVKRGFEKDKYVQNALMD-MYSRMGRIEIS 431
T + L+ A C+ R + L + H +V + Y NA ++ + R G E +
Sbjct: 214 TYALLIKAYCMAGLIERAEVVLVEMQNH-HVSPKTIGVTVY--NAYIEGLMKRKGNTEEA 270
Query: 432 KSIFGSMDR----RDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKP 487
+F M R ++N MI Y + + L +M+ Q KP
Sbjct: 271 IDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQ-----------CKP 319
Query: 488 NSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVF 547
N T ++ EI + L D+ V +AL++ Y++ G + +F
Sbjct: 320 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 379
Query: 548 DQM------PTRNVITWNVLIMAYG---MHGKGEEALELFRRMVAEKDSNKEIRPNEVTY 598
M P R ++N+++ AYG +H E E +R+ I P ++
Sbjct: 380 SLMQHMGCEPDR--ASYNIMVDAYGRAGLHSDAEAVFEEMKRL--------GIAPTMKSH 429
Query: 599 IAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMP 658
+ + +A S + V + + M N G+EP + +++L GR G+ + K++ M
Sbjct: 430 MLLLSAYSKARDVTKCEAIVKEMSEN-GVEPDTFVLNSMLNLYGRLGQFTKMEKILAEME 488
Query: 659 SNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAM 718
+ G C S Y +L NIY AG ++
Sbjct: 489 N------------GPCTAD--------------------ISTYNILINIYGKAGFLERIE 516
Query: 719 DIRKKMKEMGVR 730
++ ++KE R
Sbjct: 517 ELFVELKEKNFR 528
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 174/437 (39%), Gaps = 37/437 (8%)
Query: 238 DLVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIH 297
D++ +N +I + Q +++EA +L+S P T A + A ++ E+
Sbjct: 154 DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERA-EVV 212
Query: 298 GYALRNTDLIDNSFVGSALVDMYCNCKKADKGRW-----VFDGILR----RTVAVWNAMI 348
++N + + +G + + Y KG VF + R T +N MI
Sbjct: 213 LVEMQNHHVSPKT-IGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 271
Query: 349 AGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGF 408
Y + + KL+ EM PN T ++L+ A R E I + + G
Sbjct: 272 NLYGKASKSYMSWKLYCEM-RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 330
Query: 409 EKDKYVQNALMDMYSRMGRIEISKSIFGSMD----RRDIVSWNTMITGYVVCGRHDDALN 464
E D YV NALM+ YSR G + IF M D S+N M+ Y G H DA
Sbjct: 331 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEA 390
Query: 465 LLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDI 524
+ +M+R + + P + M +L I + + D
Sbjct: 391 VFEEMKR-----------LGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 439
Query: 525 AVGSALIDMYAKCGCLNLSRIVFDQMP----TRNVITWNVLIMAYGMHGKGEEALELFRR 580
V ++++++Y + G + +M T ++ T+N+LI YG G E ELF
Sbjct: 440 FVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVE 499
Query: 581 MVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDL 640
+ K RP+ VT+ + A S + + L +F M + G P L+
Sbjct: 500 L-----KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM-IDSGCAPDGGTAKVLLSA 553
Query: 641 LGRSGRVEEAYKLIKTM 657
+VE+ +++TM
Sbjct: 554 CSSEEQVEQVTSVLRTM 570
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 169/432 (39%), Gaps = 83/432 (19%)
Query: 324 KKADKGRWVFDGILRRT-----VAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNST 378
KK D V + ILR++ V +N +I Y + EA L+++++ ES + P
Sbjct: 133 KKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLL-ESRYVPTED 191
Query: 379 TLSSLLPA-CV-----RCKAFLDKEGIHGYVVKRGFEKDKYVQNALMD-MYSRMGRIEIS 431
T + L+ A C+ R + L + H +V + Y NA ++ + R G E +
Sbjct: 192 TYALLIKAYCMAGLIERAEVVLVEMQNH-HVSPKTIGVTVY--NAYIEGLMKRKGNTEEA 248
Query: 432 KSIFGSMDR----RDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKP 487
+F M R ++N MI Y + + L +M+ Q KP
Sbjct: 249 IDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQ-----------CKP 297
Query: 488 NSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVF 547
N T ++ EI + L D+ V +AL++ Y++ G + +F
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 357
Query: 548 DQM------PTRNVITWNVLIMAYG---MHGKGEEALELFRRMVAEKDSNKEIRPNEVTY 598
M P R ++N+++ AYG +H E E +R+ I P ++
Sbjct: 358 SLMQHMGCEPDR--ASYNIMVDAYGRAGLHSDAEAVFEEMKRL--------GIAPTMKSH 407
Query: 599 IAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMP 658
+ + +A S + V + + M N G+EP + +++L GR G+ + K++ M
Sbjct: 408 MLLLSAYSKARDVTKCEAIVKEMSEN-GVEPDTFVLNSMLNLYGRLGQFTKMEKILAEME 466
Query: 659 SNMKKVDAWSSLLGACKIHQNLEVGEIAAKQLLVLEPNVASHYVLLSNIYSSAGLWDQAM 718
+ G C S Y +L NIY AG ++
Sbjct: 467 N------------GPCTAD--------------------ISTYNILINIYGKAGFLERIE 494
Query: 719 DIRKKMKEMGVR 730
++ ++KE R
Sbjct: 495 ELFVELKEKNFR 506
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 116/568 (20%), Positives = 247/568 (43%), Gaps = 52/568 (9%)
Query: 239 LVSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHG 298
L+ ++ + S +++ +++ L M G+ + TL+ + C L G
Sbjct: 72 LIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMG 131
Query: 299 YALRNTDLIDNSFVGSALVDMYCNCKKADKGRWVFDGIL----RRTVAVWNAMIAGYARN 354
++ ++ S L++ C + + + D ++ + T+ NA++ G N
Sbjct: 132 KIIK-LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLN 190
Query: 355 EFDDEAIKLFIEMVYESDFTPNSTTLSSLLPA-CVRCKAFLDKEGIHGYVVKRGFEKDKY 413
+A+ L I+ + E+ F PN T +L C + L E + + +R + D
Sbjct: 191 GKVSDAV-LLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR-KMEERKIKLDAV 248
Query: 414 VQNALMDMYSRMGRIEISKSIFGSMD----RRDIVSWNTMITGYVVCGRHDDALNLLHDM 469
+ ++D + G ++ + ++F M+ + DI+ + T+I G+ GR DD LL DM
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 470 QRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSA 529
+ + + P+ V ++ E+H +++ ++ D ++
Sbjct: 309 IKRK-----------ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 530 LIDMYAKCGCLNLSRIVFDQMPTR----NVITWNVLIMAYGMHGKGEEALELFRRMVAEK 585
LID + K L+ + + D M ++ N+ T+N+LI Y ++ LELFR+M
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM---- 413
Query: 586 DSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSG 645
S + + + VTY + G ++ LF M + + P Y L+D L +G
Sbjct: 414 -SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR-VRPDIVSYKILLDGLCDNG 471
Query: 646 RVEEAYKLIKTMPSNMKKVD--AWSSLL-GACKIHQNLEVGEI-AAKQLLVLEPNVASHY 701
E+A ++ + + + ++D ++ ++ G C + + ++ + L ++P+V ++
Sbjct: 472 EPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYN 531
Query: 702 VLLSNIYSSAGLWDQAMDIRKKMKEMGVRKEPGCSW-IEHRDEVHKFLAGDASHPQSKEL 760
+++ + L + + R KM+E G GC++ I R + + GDA+
Sbjct: 532 IMIGGLCKKGSLSEADLLFR-KMEEDG-HSPNGCTYNILIRAHLGE---GDATKSA---- 582
Query: 761 HEYLENLLQRMRKEGYVPDTSCVLHDVD 788
L++ +++ G+ D S V VD
Sbjct: 583 -----KLIEEIKRCGFSVDASTVKMVVD 605
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 119/647 (18%), Positives = 235/647 (36%), Gaps = 126/647 (19%)
Query: 34 RSPSAWIDHLRL---QAQSSSFLQAISTYANMVAAGVPPDNFAFPAVLKAAAGVNDLNLG 90
R ID RL A++ + + M G+ + + ++ L+L
Sbjct: 67 RPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLA 126
Query: 91 KQIHGHVFKFGYASTSVAVANSLVNMYGKCGDLAGAHHVFDRISDRDH----VSWNSMIA 146
G + K GY +V + +L+N G ++ A + DR+ + H ++ N+++
Sbjct: 127 FSAMGKIIKLGYEPDTVTFS-TLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVN 185
Query: 147 AACRFXXXXXXXXXXXXXXXXNVDPTSFTLVSIAHA-CSNLRDGLSLGKQVHAYTFRNGD 205
C P T + C + + L++ + + R
Sbjct: 186 GLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM-ELLRKMEERKIK 244
Query: 206 WRTFTNNALVTMYAKLGRIDEAKALFGLFDDK----DLVSWNTVISSLSQNDRFEEALLF 261
+ ++ K G +D A LF + K D++ + T+I R+++
Sbjct: 245 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKL 304
Query: 262 LYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYC 321
L M++ + PD V ++ + LR +E+H ++ + ++ ++L+D +C
Sbjct: 305 LRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTVTYTSLIDGFC 363
Query: 322 NCKKADKGRWVFDGILRR----TVAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNS 377
+ DK + D ++ + + +N +I GY + D+ ++LF +M
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL-------- 415
Query: 378 TTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGS 437
RG D N L+ + +G++E++K +F
Sbjct: 416 ----------------------------RGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 438 MDRR----DIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLM 493
M R DIVS+ ++ G G + AL + ++
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE----------------------- 484
Query: 494 TVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRI-----VFD 548
K K+ DI + + +I G N S++ +F
Sbjct: 485 -----------------------KSKMELDIGIYNIIIH-----GMCNASKVDDAWDLFC 516
Query: 549 QMPTR----NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAA 604
+P + +V T+N++I G EA LFR+M E+D + PN TY + A
Sbjct: 517 SLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM--EEDGHS---PNGCTYNILIRA 571
Query: 605 CSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAY 651
G + L +K G + +VD+L GR+++++
Sbjct: 572 HLGEGDATKSAKLIEEIK-RCGFSVDASTVKMVVDMLS-DGRLKKSF 616
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/485 (21%), Positives = 208/485 (42%), Gaps = 42/485 (8%)
Query: 198 AYTFRNGDWRTFTNNALVTMYAKLGRIDEAKALF-GLFDDKDL---VSWNTVISSLSQND 253
++ RN +R ++ LV + A D+A LF + + L + +N + S++++
Sbjct: 48 TFSDRNLSYRDKLSSGLVGIKA-----DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTK 102
Query: 254 RFEEALLFLYHMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVG 313
++E L M G+ TL+ + L G ++ D
Sbjct: 103 QYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFN 162
Query: 314 SALVDMYCNCKKADKGRWVFDGIL----RRTVAVWNAMIAGYARNEFDDEAIKLFIEMVY 369
+ L + C+ ++ V D ++ + T+ N ++ G N +A+ L MV
Sbjct: 163 TLLNGLCLECRVSEALELV-DRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV- 220
Query: 370 ESDFTPNSTTLSSLLPA-CVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRI 428
E+ F PN T +L C + L E + + +R + D + ++D + G +
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK-MEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 429 EISKSIFGSMD----RRDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIP 484
+ + ++F M+ + DI+++NT+I G+ GR DD LL DM + +
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK----------- 328
Query: 485 LKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSR 544
+ PN VT ++ ++ +++ +A + ++LID + K L +
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 545 IVFDQMPTR----NVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIA 600
+ D M ++ +++T+N+LI Y + ++ LELFR M S + + N VTY
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM-----SLRGVIANTVTYNT 443
Query: 601 IFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSN 660
+ SG ++ LF M + + P Y L+D L +G +E+A ++ + +
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEM-VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS 502
Query: 661 MKKVD 665
++D
Sbjct: 503 KMELD 507
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 137/317 (43%), Gaps = 43/317 (13%)
Query: 398 GIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRD----IVSWNTMITGY 453
G + ++ GF + YV N LM+ + + G I ++ +F + +R +VS+NT+I GY
Sbjct: 226 GFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGY 285
Query: 454 VVCGRHDDALNLLHDMQR------------------------GQDDEYEDDESIPLKPNS 489
G D+ L H M++ G +++ L PN
Sbjct: 286 CKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND 345
Query: 490 VTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQ 549
V T++ G E + L + L DI + + L++ + K G L +R + D
Sbjct: 346 VIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDG 405
Query: 550 MPTRNV----ITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAA- 604
M R + IT+ LI + G E ALE+ + M D N I + V + A+
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEM----DQNG-IELDRVGFSALVCGM 460
Query: 605 CSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSN--MK 662
C ++D L ++A GI+P Y ++D + G + +KL+K M S+ +
Sbjct: 461 CKEGRVIDAERALREMLRA--GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518
Query: 663 KVDAWSSLL-GACKIHQ 678
V ++ LL G CK+ Q
Sbjct: 519 SVVTYNVLLNGLCKLGQ 535
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 146/358 (40%), Gaps = 59/358 (16%)
Query: 309 NSFVGSALVDMYCNCKKADKGRWVFDGILRR----TVAVWNAMIAGYARNEFDDEAIKLF 364
N +V + L++ +C + VFD I +R TV +N +I GY + DE +L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 365 IEMVYESDFTPNSTTLSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSR 424
+M +S P+ T S+L+ A + G+ + KRG + + L+ +SR
Sbjct: 299 HQM-EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 425 MGRIEISKSIFGSMDRR----DIVSWNTMITGYVVCGRHDDALNLLHDM-QRGQDDEYED 479
G I++ K + M + DIV +NT++ G+ G A N++ M +RG
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG------- 410
Query: 480 DESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGC 539
L+P+ +T T++ G EI + + D SAL+ CG
Sbjct: 411 -----LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALV-----CGM 460
Query: 540 LNLSRIVFDQMPTRNVITWNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYI 599
R++ E AL R M+ I+P++VTY
Sbjct: 461 CKEGRVI-----------------------DAERAL---REML-----RAGIKPDDVTYT 489
Query: 600 AIFAACSHSGMVDEGLNLFHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTM 657
+ A G G L M+++ G PS Y L++ L + G+++ A L+ M
Sbjct: 490 MMMDAFCKKGDAQTGFKLLKEMQSD-GHVPSVVTYNVLLNGLCKLGQMKNADMLLDAM 546
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/382 (19%), Positives = 142/382 (37%), Gaps = 64/382 (16%)
Query: 208 TFTNNALVTMYAKLGRIDEAKALFGLFDDKDL----VSWNTVISSLSQNDRFEEALLFLY 263
+ N L+ + K G I +A+ +F + L VS+NT+I+ + +E +
Sbjct: 240 VYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKH 299
Query: 264 HMLQSGVRPDGVTLASALPACSHLEMLRTGKEIHGYALRNTDLIDNSFVGSALVDMYCNC 323
M +S RPD F SAL++ C
Sbjct: 300 QMEKSRTRPD------------------------------------VFTYSALINALCKE 323
Query: 324 KKADKGRWVFDGILRRTV----AVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTT 379
K D +FD + +R + ++ +I G++RN D + + +M+ + P+
Sbjct: 324 NKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG-LQPDIVL 382
Query: 380 LSSLLPACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMD 439
++L+ + + I +++RG DK L+D + R G +E + I MD
Sbjct: 383 YNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMD 442
Query: 440 RRDI----VSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTV 495
+ I V ++ ++ G GR DA L +M R +KP+ VT +
Sbjct: 443 QNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG-----------IKPDDVTYTMM 491
Query: 496 LPGCXXXXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNV 555
+ ++ + + L++ K G + + ++ D M V
Sbjct: 492 MDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGV 551
Query: 556 ----ITWNVLIMAYGMHGKGEE 573
IT+N L+ + H +
Sbjct: 552 VPDDITYNTLLEGHHRHANSSK 573
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 108/478 (22%), Positives = 204/478 (42%), Gaps = 51/478 (10%)
Query: 221 LGRIDEAKALFGLFDDKDL--VSWNTVISSLSQNDRFEEALLFLYHMLQSGVRPDGVTLA 278
LGR ++ F L + L +++N +I + ++N+ E+AL + M Q G + D V +
Sbjct: 177 LGRSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYS 236
Query: 279 SALPACSH------LEMLRTGKEIHGYALR-NTDLIDNSFVGSALVDMYCNCKKADKGRW 331
+ + + + +LR KEI L + L+++ +G A K D +
Sbjct: 237 LVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFA--------KSGDPSKA 288
Query: 332 V-FDGILRRT-----VAVWNAMIAGYARNEFDDEAIKLFIEMVYESDFTPNSTTLSSLLP 385
+ G+ + T A ++I+ A + EA LF E+ +S P + ++LL
Sbjct: 289 LQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEEL-RQSGIKPRTRAYNALLK 347
Query: 386 ACVRCKAFLDKEGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDI-- 443
V+ D E + + KRG D++ + L+D Y GR E ++ + M+ D+
Sbjct: 348 GYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQP 407
Query: 444 --VSWNTMITGYVVCGRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXX 501
++ ++ G+ G +L +M+ SI +KP+ V+
Sbjct: 408 NSFVFSRLLAGFRDRGEWQKTFQVLKEMK-----------SIGVKPDRQFYNVVIDTFGK 456
Query: 502 XXXXXXXXEIHAYALKQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVI----T 557
L + + D + LID + K G ++ +F+ M R + T
Sbjct: 457 FNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATT 516
Query: 558 WNVLIMAYGMHGKGEEALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNL 617
+N++I +YG + ++ L +M ++ I PN VT+ + SG ++ +
Sbjct: 517 YNIMINSYGDQERWDDMKRLLGKM-----KSQGILPNVVTHTTLVDVYGKSGRFNDAIEC 571
Query: 618 FHTMKANHGIEPSSDHYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVD--AWSSLLGA 673
MK+ G++PSS Y L++ + G E+A + M S+ K A +SL+ A
Sbjct: 572 LEEMKS-VGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINA 628
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 152/404 (37%), Gaps = 68/404 (16%)
Query: 340 TVAVWNAMIAGYARNEFDDEAIKLFIEMV---YESDFTPNSTTLSSLLPACVRCKAFLDK 396
T +NA+I ARN ++A+ L +M Y+SDF S + SL
Sbjct: 196 TPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLT------------ 243
Query: 397 EGIHGYVVKRGFEKDKYVQNALMDMYSRMGRIEISKSIFGSMDRRDIVSWNTMITGYVVC 456
+K L+ +Y + R ++ D+ N +I G+
Sbjct: 244 ------------RSNKIDSVMLLRLYKEIERDKLE---------LDVQLVNDIIMGFAKS 282
Query: 457 GRHDDALNLLHDMQRGQDDEYEDDESIPLKPNSVTLMTVLPGCXXXXXXXXXXEIHAYAL 516
G AL LL Q + L + TL++++ +
Sbjct: 283 GDPSKALQLLGMAQ-----------ATGLSAKTATLVSIISALADSGRTLEAEALFEELR 331
Query: 517 KQKLATDIAVGSALIDMYAKCGCLNLSRIVFDQMPTRNVI----TWNVLIMAYGMHGKGE 572
+ + +AL+ Y K G L + + +M R V T+++LI AY G+ E
Sbjct: 332 QSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWE 391
Query: 573 EALELFRRMVAEKDSNKEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMKANHGIEPSSD 632
A R+V ++ +++PN + + A G + + MK+ G++P
Sbjct: 392 SA-----RIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS-IGVKPDRQ 445
Query: 633 HYACLVDLLGRSGRVEEAYKLIKTMPSNMKKVD--AWSSLLGA-CKIHQNLEVGEIAAKQ 689
Y ++D G+ ++ A M S + D W++L+ CK +++ +A +
Sbjct: 446 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHI----VAEEM 501
Query: 690 LLVLEPN----VASHYVLLSNIYSSAGLWDQAMDIRKKMKEMGV 729
+E A+ Y ++ N Y WD + KMK G+
Sbjct: 502 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI 545