Miyakogusa Predicted Gene

Lj6g3v1358620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1358620.1 tr|I1L9B1|I1L9B1_SOYBN Lysyl-tRNA synthetase
OS=Glycine max PE=3 SV=1,90.93,0,seg,NULL; coiled-coil,NULL; Class II
aaRS and biotin synthetases,NULL; Nucleic acid-binding
proteins,NODE_37580_length_1517_cov_173.673035.path2.1
         (485 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G11710.1 | Symbols: ATKRS-1 | lysyl-tRNA synthetase 1 | chr3:...   685   0.0  
AT3G13490.1 | Symbols: OVA5, ATKRS-2 | Lysyl-tRNA synthetase, cl...   227   1e-59
AT4G33760.1 | Symbols:  | tRNA synthetase class II (D, K and N) ...    74   2e-13
AT4G26870.1 | Symbols:  | Class II aminoacyl-tRNA and biotin syn...    72   9e-13
AT4G31180.2 | Symbols:  | Class II aminoacyl-tRNA and biotin syn...    57   3e-08
AT4G31180.1 | Symbols:  | Class II aminoacyl-tRNA and biotin syn...    57   3e-08

>AT3G11710.1 | Symbols: ATKRS-1 | lysyl-tRNA synthetase 1 |
           chr3:3702359-3705613 REVERSE LENGTH=626
          Length = 626

 Score =  685 bits (1767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/434 (73%), Positives = 372/434 (85%), Gaps = 5/434 (1%)

Query: 52  AKDNKSAPVDEDDMDPTQYFENRIKYLAGQKGEGNNPYPHKFFVTMSVAEYIKEYEGLSN 111
           A   K+   D+++MD TQY+ENR+KYLA +K +G NPYPHKF V+MS+ +YI+ Y  L+N
Sbjct: 72  ASSQKAVAADDEEMDATQYYENRLKYLAAEKAKGENPYPHKFAVSMSIPKYIETYGSLNN 131

Query: 112 GQHLEDVSVSLAGRIMHKRASGAKLVFYDLHGGGFKVQVMADASKSDLNEAEFSKFHSNV 171
           G H+E+   SLAGRIM KR+S +KL FYDLHG  FKVQVMADASKS L+EAEF K HSN 
Sbjct: 132 GDHVENAEESLAGRIMSKRSSSSKLFFYDLHGDDFKVQVMADASKSGLDEAEFLKLHSNA 191

Query: 172 KRGDIVGITGFPGKSKKGELSIFPKTFVVLSHCLHMMPRQKSXXXXXXXXXXXXXWVPGN 231
           KRGDIVG+ GFPGK+K+GELSIFP++F++LSHCLHMMPR+               WVPG 
Sbjct: 192 KRGDIVGVIGFPGKTKRGELSIFPRSFILLSHCLHMMPRKADNVNAKKPEI----WVPGQ 247

Query: 232 TRNPETYILKDQETRYRLRHLDLMLNPEVREIFKTRSKIISYIRRFLDDLDFLEVETPMM 291
           TRNPE Y+LKDQE+RYR RHLD++LN EVR+IF+TR+KIISY+RRFLD+ +FLEVETPMM
Sbjct: 248 TRNPEAYVLKDQESRYRQRHLDMILNVEVRQIFRTRAKIISYVRRFLDNKNFLEVETPMM 307

Query: 292 NMIAGGAAARPFVTHHNDLNMRLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTH 351
           NMIAGGAAARPFVTHHNDL+MRL+MRIAPELYLK+L+VGGL+RVYEIGKQFRNEGIDLTH
Sbjct: 308 NMIAGGAAARPFVTHHNDLDMRLYMRIAPELYLKQLIVGGLERVYEIGKQFRNEGIDLTH 367

Query: 352 NPEFTTCEFYMAYMDYNDLMELTEQLLSGMVKELTKGSYKIKYHADGIDKDPIEIDFTPP 411
           NPEFTTCEFYMA+ DYNDLME+TE +LSGMVKELT G YKIKY+A+G DKDPIEIDFTPP
Sbjct: 368 NPEFTTCEFYMAFADYNDLMEMTEVMLSGMVKELT-GGYKIKYNANGYDKDPIEIDFTPP 426

Query: 412 FRRIDMIEDLEKMAGLNIPKDLSSEEANQYLRDACLKHEIKCPPPETTARLLDKLVGHFL 471
           FRRI+MI +LEK+A LNIPKDL+SEEAN+YL DAC + ++KCPPP+TTARLLDKLVG FL
Sbjct: 427 FRRIEMIGELEKVAKLNIPKDLASEEANKYLIDACARFDVKCPPPQTTARLLDKLVGEFL 486

Query: 472 EETCVNPTFIINHP 485
           E TCVNPTFIIN P
Sbjct: 487 EPTCVNPTFIINQP 500


>AT3G13490.1 | Symbols: OVA5, ATKRS-2 | Lysyl-tRNA synthetase, class
           II | chr3:4395984-4399302 REVERSE LENGTH=602
          Length = 602

 Score =  227 bits (579), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 145/424 (34%), Positives = 228/424 (53%), Gaps = 52/424 (12%)

Query: 74  RIKYLAGQKGEGNNPYPHKFFVTMSVAEYIKEYEGLSNGQHLEDV--SVSLAGRIMHKRA 131
           R+K +   +G+G  PY +K+  + S  +  + Y+ L+NG+  ++    VS+AGR++ +RA
Sbjct: 88  RLKKVEELRGQGLEPYAYKWEKSHSANQLQEIYKHLANGEESDNEIDCVSIAGRVVARRA 147

Query: 132 SGAKLVFYDLHGGGFKVQVMADASKSDLNEAEFSKFHSNVKRGDIVGITGFPGKSKKGEL 191
            G KL F  L      +Q+  +  K  L++ +F +    +  GDI+G +G   +++KGEL
Sbjct: 148 FG-KLAFLTLRDDSGTIQLYCE--KERLSDDQFEQLKQFIDIGDILGASGSMKRTEKGEL 204

Query: 192 SIFPKTFVVLSHCLHMMPRQKSXXXXXXXXXXXXXWVPGNTRNPETYILKDQETRYRLRH 251
           SI   +F +L+  L  +P                          + + L D + RYR R+
Sbjct: 205 SICVNSFSILTKSLLPLP-------------------------DKYHGLTDIDKRYRQRY 239

Query: 252 LDLMLNPEVREIFKTRSKIISYIRRFLDDLDFLEVETPMMNMIAGGAAARPFVTHHNDLN 311
           +D++ NPEV ++F+ R+KI+S IR+ ++   +LEVETP++   AGGA ARPFVT HN L 
Sbjct: 240 VDMIANPEVADVFRRRAKIVSEIRKTVESFGYLEVETPVLQGAAGGAEARPFVTFHNSLG 299

Query: 312 MRLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAYMDYNDLM 371
             L++RIA EL+LK ++VGG ++VYEIG+ FRNEGI   HNPEFTT E Y AY DY+ +M
Sbjct: 300 RDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYHSMM 359

Query: 372 ELTEQLLSGMVKELTKGSYKIKYHADGIDKDPIEIDFTPPFRRIDMIEDLEKMAGLNIPK 431
           ++ E L+         G   I Y          EI    P+RR  M   ++++ G+N   
Sbjct: 360 DMAE-LIVTQCSMAVNGKLTIDYQG-------TEICLERPWRRETMHNLVKEITGINF-S 410

Query: 432 DLSSEEANQYLRDACL--KHEIKCPPPETTARLLDKLVGHFLEET--------CVNPTFI 481
           +L  +  N   +D  L    ++  P  ++  R    L GH L E          V PTF+
Sbjct: 411 ELGEDLGNA--KDTVLLALQDVLEPKDKSGIRACSSL-GHLLNEIFEVVVEPKLVQPTFV 467

Query: 482 INHP 485
           +++P
Sbjct: 468 LDYP 471


>AT4G33760.1 | Symbols:  | tRNA synthetase class II (D, K and N)
           family protein | chr4:16189285-16193260 REVERSE
           LENGTH=664
          Length = 664

 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 2/147 (1%)

Query: 240 LKDQETRYRLRHLDLMLNPEVREIFKTRSKIISYIRRFLDDL-DFLEVETPMMNMIAGGA 298
           L  +E R R R LDL    +++     R  ++  IRR+L+D   F+E+ETP+++      
Sbjct: 196 LIKEEIRLRFRCLDLR-RQQMKNNIVLRHNVVKLIRRYLEDRHGFIEIETPILSRSTPEG 254

Query: 299 AARPFVTHHNDLNMRLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTC 358
           A    V           +  +P+L+ + L+V G D+ Y+I + FR+E +     PEFT  
Sbjct: 255 ARDYLVPSRIQSGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQPEFTQL 314

Query: 359 EFYMAYMDYNDLMELTEQLLSGMVKEL 385
           +  MA+M   D+++L E L+  +  E+
Sbjct: 315 DMEMAFMPMEDMLKLNEDLIRKVFSEI 341


>AT4G26870.1 | Symbols:  | Class II aminoacyl-tRNA and biotin
           synthetases superfamily protein | chr4:13505381-13507619
           FORWARD LENGTH=532
          Length = 532

 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 119/289 (41%), Gaps = 25/289 (8%)

Query: 105 EYEGLSNGQHLEDVS----------VSLAGRIMHKRASGAKLVFYDLHGGGFKVQVMADA 154
           E +    G+ L DVS          VS+ GR+   R  G KL F  L   GF VQ + + 
Sbjct: 63  ELQSAVEGKELTDVSNLVEEIVGSEVSIRGRLHKNRLVGTKL-FVILRESGFTVQCVVEE 121

Query: 155 SKSDLNEAEFSKFHSNVKRGDIVGITGFPGKSKKG---ELSIFPKTFVVLSHCLHMMPRQ 211
           ++   N  +F K  S     +++G+   P K   G   ++ I  +    LS  L  +P  
Sbjct: 122 TRVGANMIKFVKQLSRESVVELIGVVSHPKKPLTGTTQQVEIHVRKMYCLSRSLPNLP-- 179

Query: 212 KSXXXXXXXXXXXXXWVPGNTRNPETYILKDQETRYRLRHLDLMLNPEVREIFKTRSKII 271
                             G        +L+D  TR   R LD+   P  + IF+ + ++ 
Sbjct: 180 --LVVEDAARSESDIEKSGKDGKQAARVLQD--TRLNNRVLDIR-TPANQAIFRIQCQVQ 234

Query: 272 SYIRRFLDDLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMRLFMRIAPELYLKELVVGG 331
              R +L    FLE+ TP   +IAG +     V   +       +  +P+L+ +  + G 
Sbjct: 235 IAFREYLQSKGFLEIHTP--KLIAGSSEGGSAVFRLDYKGQPACLAQSPQLHKQMAICGD 292

Query: 332 LDRVYEIGKQFRNE-GIDLTHNPEFTTCEFYMAY-MDYNDLMELTEQLL 378
           + RV+E+G  FR E      H  EF   +  M   M Y+++M+L  +L 
Sbjct: 293 MRRVFEVGPVFRAEDSFTHRHLCEFVGLDVEMEIRMHYSEIMDLVGELF 341


>AT4G31180.2 | Symbols:  | Class II aminoacyl-tRNA and biotin
           synthetases superfamily protein | chr4:15156696-15159362
           FORWARD LENGTH=558
          Length = 558

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/339 (22%), Positives = 139/339 (41%), Gaps = 25/339 (7%)

Query: 104 KEYEGLSN-GQHLEDVSVSLAGRIMHKRASGAKLVFYDLHGGGFKVQVMADASKSDLNEA 162
           KE+  +S+  + + +  V + GR+   R +  KL F  L   G  VQ +   S+     A
Sbjct: 93  KEWTDVSDLVEEMLESEVLIRGRVHTNRPTSNKLGFVVLRESGSTVQCVVSQSEKTKVGA 152

Query: 163 EFSKFHSNVKRG---DIVGITGFPGKSKKG---ELSIFPKTFVVLSHCLHMMPRQKSXXX 216
              K+   + R    D++G+   P +   G   ++ I  +    ++  L  +P       
Sbjct: 153 NMVKYLKQLSRESFVDVIGVVTLPKEPLTGTTQQVEIQVRKVYCINKSLAKLP------L 206

Query: 217 XXXXXXXXXXWVPGNTRNPETYILKDQETRYRLRHLDLMLNPEVREIFKTRSKIISYIRR 276
                      +  + + P      +Q+TR   R LDL   P  + IF+ + ++    R 
Sbjct: 207 SVEDAARSEADIEASLQTPSPAARVNQDTRLNYRVLDLR-TPANQAIFQLQYEVEYAFRE 265

Query: 277 FLDDLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMRLFMRIAPELYLKELVVGGLDRVY 336
            L   +F+ + TP   ++AG +     V           +  +P+L+ +  + G L RV+
Sbjct: 266 KLRFKNFVGIHTP--KLMAGSSEGGSAVFRLEYKGQPACLAQSPQLHKQMAICGDLRRVF 323

Query: 337 EIGKQFRNE-GIDLTHNPEFTTCEFYMAYMD-YNDLMELTEQLLSGMVKELTKGSYKIKY 394
           E+G  FR E      H  EF   +  M     Y+++M+L ++L   +   L +   + K 
Sbjct: 324 EVGPVFRAEDSFTHRHLCEFVGLDVEMEIRKHYSEIMDLVDELFVFIFTSLNE---RCKK 380

Query: 395 HADGIDKD-PIE-IDFTPPFRRIDMIEDLE--KMAGLNI 429
               + K  P E + F P   R+   E ++  K AG+ +
Sbjct: 381 ELQAVGKQYPFEPLKFLPKTLRLTFEEGVQMLKEAGVEV 419


>AT4G31180.1 | Symbols:  | Class II aminoacyl-tRNA and biotin
           synthetases superfamily protein | chr4:15156696-15159362
           FORWARD LENGTH=558
          Length = 558

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/339 (22%), Positives = 139/339 (41%), Gaps = 25/339 (7%)

Query: 104 KEYEGLSN-GQHLEDVSVSLAGRIMHKRASGAKLVFYDLHGGGFKVQVMADASKSDLNEA 162
           KE+  +S+  + + +  V + GR+   R +  KL F  L   G  VQ +   S+     A
Sbjct: 93  KEWTDVSDLVEEMLESEVLIRGRVHTNRPTSNKLGFVVLRESGSTVQCVVSQSEKTKVGA 152

Query: 163 EFSKFHSNVKRG---DIVGITGFPGKSKKG---ELSIFPKTFVVLSHCLHMMPRQKSXXX 216
              K+   + R    D++G+   P +   G   ++ I  +    ++  L  +P       
Sbjct: 153 NMVKYLKQLSRESFVDVIGVVTLPKEPLTGTTQQVEIQVRKVYCINKSLAKLP------L 206

Query: 217 XXXXXXXXXXWVPGNTRNPETYILKDQETRYRLRHLDLMLNPEVREIFKTRSKIISYIRR 276
                      +  + + P      +Q+TR   R LDL   P  + IF+ + ++    R 
Sbjct: 207 SVEDAARSEADIEASLQTPSPAARVNQDTRLNYRVLDLR-TPANQAIFQLQYEVEYAFRE 265

Query: 277 FLDDLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMRLFMRIAPELYLKELVVGGLDRVY 336
            L   +F+ + TP   ++AG +     V           +  +P+L+ +  + G L RV+
Sbjct: 266 KLRFKNFVGIHTP--KLMAGSSEGGSAVFRLEYKGQPACLAQSPQLHKQMAICGDLRRVF 323

Query: 337 EIGKQFRNE-GIDLTHNPEFTTCEFYMAYMD-YNDLMELTEQLLSGMVKELTKGSYKIKY 394
           E+G  FR E      H  EF   +  M     Y+++M+L ++L   +   L +   + K 
Sbjct: 324 EVGPVFRAEDSFTHRHLCEFVGLDVEMEIRKHYSEIMDLVDELFVFIFTSLNE---RCKK 380

Query: 395 HADGIDKD-PIE-IDFTPPFRRIDMIEDLE--KMAGLNI 429
               + K  P E + F P   R+   E ++  K AG+ +
Sbjct: 381 ELQAVGKQYPFEPLKFLPKTLRLTFEEGVQMLKEAGVEV 419