Miyakogusa Predicted Gene

Lj6g3v1357540.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1357540.1 Non Chatacterized Hit- tr|A5C344|A5C344_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,45.61,3e-19,seg,NULL,CUFF.59387.1
         (199 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G17690.1 | Symbols: NOF1 | FUNCTIONS IN: molecular_function u...    96   1e-20

>AT1G17690.1 | Symbols: NOF1 | FUNCTIONS IN: molecular_function
           unknown; INVOLVED IN: biological_process unknown;
           LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures;
           EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
           DOMAIN/s: Digestive organ expansion factor, predicted
           (InterPro:IPR010678); Has 25006 Blast hits to 13379
           proteins in 904 species: Archae - 102; Bacteria - 5571;
           Metazoa - 7448; Fungi - 3168; Plants - 1056; Viruses -
           466; Other Eukaryotes - 7195 (source: NCBI BLink). |
           chr1:6082878-6088157 REVERSE LENGTH=754
          Length = 754

 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 87/159 (54%), Gaps = 13/159 (8%)

Query: 46  DVHDDGEGFDDESPRSNLVETVQQDPDNSNSGLIEGSETEDGVEF-SDLDEEDIEINGPL 104
           D  DD    DD+     L +  Q+D DN        SE ED  ++ +D +  ++  NG  
Sbjct: 118 DGEDDKSQGDDQETLGGLTDDTQEDNDNQ-------SEEEDPDDYETDEEVHELSTNGQS 170

Query: 105 TSEDSVQLSSFYLHLHHILSKEEIDS--QKNWKYSWEIPAIGMTNCKWTGTGDNFLKDMN 162
             + S  +S+F  HL H LS EE+++  +  WK+ WE PA  M NCKW GT +NFL  + 
Sbjct: 171 FVDASSSISAFSEHLSHKLSSEEVETLPKGKWKFKWESPAFDMPNCKWKGTSENFLDGIQ 230

Query: 163 TNSYDGLKARLYEHWMDINKTSG---VDLSKQKMLFSLC 198
           +++  GLK +LY HW+ + K  G   +D SK++  FS+C
Sbjct: 231 SDAPYGLKPKLYNHWLQLYKKCGGKDLDSSKRRKFFSIC 269