Miyakogusa Predicted Gene
- Lj6g3v1356520.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1356520.1 tr|G7IN26|G7IN26_MEDTR Pumilio-like protein
OS=Medicago truncatula GN=MTR_2g036900 PE=4 SV=1,79.72,0,PUF,Pumilio
RNA-binding repeat; PUMILIO 1, 2,NULL; RNA BINDING PROTEIN
PUMILIO-RELATED,NULL; Pumilio,CUFF.59391.1
(976 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G25880.1 | Symbols: APUM6, PUM6 | pumilio 6 | chr4:13155518-1... 704 0.0
AT3G20250.1 | Symbols: APUM5, PUM5 | pumilio 5 | chr3:7059098-70... 697 0.0
AT4G25880.2 | Symbols: APUM6, PUM6 | pumilio 6 | chr4:13155518-1... 686 0.0
AT4G25880.3 | Symbols: APUM6, PUM6 | pumilio 6 | chr4:13155518-1... 684 0.0
AT2G29200.1 | Symbols: APUM1, PUM1 | pumilio 1 | chr2:12549483-1... 505 e-143
AT2G29140.1 | Symbols: APUM3, PUM3 | pumilio 3 | chr2:12531392-1... 500 e-141
AT2G29190.2 | Symbols: PUM2 | pumilio 2 | chr2:12544260-12548071... 487 e-137
AT2G29190.1 | Symbols: APUM2, PUM2 | pumilio 2 | chr2:12544260-1... 487 e-137
AT3G10360.1 | Symbols: APUM4, PUM4 | pumilio 4 | chr3:3211276-32... 459 e-129
AT1G78160.1 | Symbols: APUM7, PUM7 | pumilio 7 | chr1:29407900-2... 186 6e-47
AT1G22240.1 | Symbols: APUM8, PUM8 | pumilio 8 | chr1:7853084-78... 186 9e-47
AT5G56510.1 | Symbols: APUM12, PUM12 | pumilio 12 | chr5:2288172... 172 8e-43
AT4G08840.1 | Symbols: APUM11, PUM11 | pumilio 11 | chr4:5631298... 162 1e-39
AT1G35730.1 | Symbols: APUM9, PUM9 | pumilio 9 | chr1:13227324-1... 149 1e-35
AT1G35750.1 | Symbols: APUM10, PUM10 | pumilio 10 | chr1:1325339... 140 3e-33
AT5G43090.1 | Symbols: APUM13, PUM13 | pumilio 13 | chr5:1729593... 90 9e-18
AT5G43110.1 | Symbols: APUM14, PUM14 | pumilio 14 | chr5:1730984... 75 2e-13
AT5G59280.1 | Symbols: APUM16, PUM16 | pumilio 16 | chr5:2391414... 70 5e-12
AT4G08560.1 | Symbols: APUM15, PUM15 | pumilio 15 | chr4:5450434... 66 1e-10
AT5G09610.1 | Symbols: APUM21, PUM21 | pumilio 21 | chr5:2981156... 65 3e-10
AT1G35850.1 | Symbols: APUM17, PUM17 | pumilio 17 | chr1:1333051... 63 8e-10
AT1G21620.1 | Symbols: APUM20, PUM20 | pumilio 20 | chr1:7579129... 53 1e-06
AT5G60110.1 | Symbols: APUM18, PUM18 | pumilio 18 | chr5:2420195... 50 7e-06
AT5G60180.1 | Symbols: APUM19, PUM19 | pumilio 19 | chr5:2423302... 50 1e-05
>AT4G25880.1 | Symbols: APUM6, PUM6 | pumilio 6 |
chr4:13155518-13159078 FORWARD LENGTH=861
Length = 861
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/994 (45%), Positives = 573/994 (57%), Gaps = 159/994 (15%)
Query: 1 MATESPIRISEAGGKWPSHKEAATFGQPSHNMVTEDLGILLKGHRFHGRGHDVAPNRSGS 60
MATE+PIRIS + +W + ++ + PNRSGS
Sbjct: 1 MATENPIRISGSNERWSNSRKVSV------------------------------PNRSGS 30
Query: 61 APPSMEGSFLAIENLLHXXXXXXXXXXXXXXRAVQ-----NCESEEQLRASPAYLAYYSS 115
APP+MEGSFLA++NLL + + S+ L P+ YY +
Sbjct: 31 APPNMEGSFLAVDNLLSRQGGSVYNNLMLPRYGFEEPVTTHPSSKHSLNRIPSPPIYYPT 90
Query: 116 XXXXXXXXXXXXTSWENRHLGHHIGSFRDNGRF----SSDHGSKSSLSTHKEEPEDDSPK 171
E + + + +G FR N S H S+ LSTHKE ED+S +
Sbjct: 91 ---------------EYQFIDNRVGRFRSNQGLNKVNSPIHLSQGKLSTHKEVSEDESSQ 135
Query: 172 R-PYESELVKTTGVWHR--PGAASLTSQHKNAVDLIQEDFPRTMSPVYNKSPSASHGLVD 228
+ S +T G+ R PG+ SL D Q+D +P +++S ++S+G V+
Sbjct: 136 QLSVNSVSDRTDGLDIRLSPGSQSL-------ADFRQDDTSSGQTPQHSRS-NSSNGEVN 187
Query: 229 KXXXXXXXXXXXXXXXXXXXXXAQPTADE-GDIRLSSSFDTHAPVAXXXXXXXXXXMGFS 287
TADE G+ S V +G
Sbjct: 188 -------------------------TADESGNF---SELSDDVVVKDNAASTARASIGNE 219
Query: 288 DL-NVATIESQLKALSVSNLPNPESLSYEEKWKTIYQNNLMQRQVFPQQNNPYEVPSAN- 345
+ +TI S++K+ +N+ P + Y + + +RQ QQNN + +
Sbjct: 220 KSPDESTIISKMKS---TNISGPGTAKYPREPRY----GQPERQPHQQQNNATWIQGGSN 272
Query: 346 --SQSVNSAYVVREQFPQNSG-KFP-DVQPLLQSSGFTPPLY--ATAAAYMTSANPFYTN 399
S VN A + QF KF D QP+LQSSGFTPPL AT AYMTS Y N
Sbjct: 273 MGSHGVNDAVIGAGQFHYGQPYKFSGDGQPVLQSSGFTPPLLYTATQTAYMTSPAHVY-N 331
Query: 400 MQAPGIYTPQYVGGYTLNPTAIPQYITAYPPHGAVPLVDGASSSRYTPLTPGVSTGGSIS 459
MQ+P +Y+PQY GY IPQ++ YP HG+VP+V S + P G S GS+
Sbjct: 332 MQSPAVYSPQY--GYGPYTNMIPQFMPGYPSHGSVPVV---VSPDFIPQLSGPS-AGSVV 385
Query: 460 HGAEMVHANKYLGQFGYPMQPSFGDPYYMQYHQQPLMEGYGISGHFDPLAPRASDASQTS 519
HG EM +A K + P QPSF DP YMQY QQ G +PLAPR + T+
Sbjct: 386 HGGEMQYAEKL---YVPPGQPSFPDPMYMQYCQQSF-------GQMEPLAPR----NHTN 431
Query: 520 PYDSQKRPSTGAYLDDKRILDQRTGANINSRKGGSLTPSYFGHMPNMGFVMQYPNSPLPS 579
+SQK DD + L Q G + ++ + +Y+G PNMG ++QY LP+
Sbjct: 432 APESQK--------DDPKFLRQIRGPSNSNMARPGMGVNYYGIQPNMGIMVQY----LPT 479
Query: 580 PAFSGYPEGTLGLPGGRNEMKLSPASGRNGGILSGWQGQRSFDSAHDPKIVNFLEELKSG 639
LG P LSP GWQ Q S + A+ P++ NFLEELKSG
Sbjct: 480 ---------HLGPP-------LSPGHVPYVEAYPGWQPQGSLEGANGPRLCNFLEELKSG 523
Query: 640 KGRRFELSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGN 699
KGRRF+LSDI GHIVEFSADQHGSRFIQQKLE C E+KA VF+E+LP A KLMTDVFGN
Sbjct: 524 KGRRFDLSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGN 583
Query: 700 YVIQKFFEYGSPEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRELDG 759
YVIQKFFEYG+ QR+ELADQL GQI+PLSLQMYGCRVIQKAL+VI+ DQ+ +L RELDG
Sbjct: 584 YVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDG 643
Query: 760 NVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTD 819
VMRCVRDQNGNHVIQKCIE+IP K+GF+L AF GQV++LSMHPYGCRVIQR+LE C+
Sbjct: 644 QVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSH 703
Query: 820 EVQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFA 879
+ QC+FI +EILESVC L++DQYGNYVTQHVLE+G +ER +I KLSGHIVQLS HKFA
Sbjct: 704 DHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFA 763
Query: 880 SNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRAT 939
SNV+EKCL YG ER+ +I EI G DE N+LL MMKDQ+ NYVVQK+ + C+ +QR T
Sbjct: 764 SNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLT 823
Query: 940 LLSHIRVHAQALKKYTYGKHIVARLEQ-QFEEDQ 972
L S +R+HA ALKKYTYGKHIV+RLEQ EE+Q
Sbjct: 824 LFSRVRMHASALKKYTYGKHIVSRLEQPSIEENQ 857
>AT3G20250.1 | Symbols: APUM5, PUM5 | pumilio 5 |
chr3:7059098-7062660 REVERSE LENGTH=961
Length = 961
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/1013 (43%), Positives = 571/1013 (56%), Gaps = 113/1013 (11%)
Query: 2 ATESPIRISEAG--GKWPSHKEAATFGQPSHNMVTEDLGILLKGHRFH-GRGHDVAPNRS 58
T+S +R+ E W + ++ FG S +M EDLG L+K +R G P+RS
Sbjct: 3 TTQSAMRMVEGDHIKNWQASSDSGIFG--SLDMAVEDLGFLMKRNRLDSGDQTGKFPSRS 60
Query: 59 GSAPPSMEGSFLAIENLLHXXXXXXXXXXXXXXRAVQNCESEEQLRASPAYLAYYSSXXX 118
SAPPSMEGSF A+ NLL RA++N +SEE++R+ PAY+AYY S
Sbjct: 61 ESAPPSMEGSFAALRNLL---KQQEGSSSEVLSRAIENYDSEEEIRSDPAYVAYYLSNIN 117
Query: 119 XXXXXXXXXTSWENRHLGHHIG--------SFRDNGRFSSDHGSKSSLSTHKEEPEDDSP 170
S EN+HL H G S+ + G SS H S+++LSTH+EEPED++
Sbjct: 118 LNPRLPPPLISRENQHLLRHFGDNNQSPTTSWDNMGIRSSLHSSRTALSTHREEPEDEAS 177
Query: 171 KRPYESELVKTTGVWHRPGAASLTSQHKNAVDLIQEDFPRTMSPVYNKSPSASHGLVDKX 230
+S ASL + K+ D+IQEDFP T+S V+ + SA + + +
Sbjct: 178 SGEQQS-------------YASLAGRRKSIADMIQEDFPLTLSSVFKRPHSAGNRPIAQD 224
Query: 231 XXXXXXXXXXXXXXXXXXXXAQPTADEGDIRLSSSFDTHAPVAXXXXXXXXXXMGFSDLN 290
P +D + L D+ + A +
Sbjct: 225 IHAISSDTSSEHARRL------PESDINSVNLLRETDSLSSDAIASEDPFTTDLASQSFT 278
Query: 291 VATIESQLKALSVSNLPNPESLSYEEKWKTIYQNNLMQRQVFPQQNNPYEVPSANSQSVN 350
A E +L A S+ N S+ ++ M+R QQ+ +P Q
Sbjct: 279 NAQTE-RLNARQASHEDNNLSVFGASPPSSVASR--MRRNQEDQQSQGRRMPP---QYTP 332
Query: 351 SAYVVREQFPQNSGKFPDV---QPLLQS----------SGFT-------PPLYATAAAYM 390
S+Y V+ PQ +P + Q ++QS S F PP+Y + AAYM
Sbjct: 333 SSYQVQASSPQQMS-YPRIGGTQDMMQSLPKIATGEVHSTFQSPHGLAPPPMYTSTAAYM 391
Query: 391 TSANPFY-TNMQAPGIYTPQY-VGGYTLNPTAIPQYITAYPPHGA-VPL---VDGASSSR 444
TS +PFY N Q+ G++ PQY GGY +PQY++ YP H A VP+ + SS
Sbjct: 392 TSLSPFYHQNFQSSGMFVPQYNYGGYPPASGIVPQYMSGYPSHEATVPMPYDISSTSSGY 451
Query: 445 YTP-LTPGVSTGGSISHGAEMVHANKYLGQFGYPMQPSFGDPYYMQYHQQPLMEGYGISG 503
P L PGVS+ G PS DP+ +QY QQ ++ Y
Sbjct: 452 NNPRLLPGVSSSGQ--------------------NIPSLVDPFQLQYFQQAQVDAYA--- 488
Query: 504 HFDPLAPRASDASQTSPYDSQKRPSTGAYLDDKRILDQ--RTGANINS-RKGGSLTPSYF 560
P ++D+ QK Y+ + L+ G + S R G+ YF
Sbjct: 489 ---PPFQSSTDSF------GQKDQQAVGYMANHEPLNSPLSPGYGLQSPRHMGN----YF 535
Query: 561 GHMPNMGFVMQYPNSPLPSPAFSGYPEGTLGLPGGRNEMKLSPASG--RNGGIL-SGWQG 617
P + + QYP SPL SP P G + GR G RN GI GWQG
Sbjct: 536 AVPPGVRVMPQYPGSPLASPVMPSSPVGGMMSHFGRRSETRYHQQGPSRNTGIYPGGWQG 595
Query: 618 QRSFDSA--HDPKIVNFLEELKSGKGRRFELSDIIGHIVEFSADQHGSRFIQQKLETCGV 675
R S+ D K +FL+ELKS R+ ELSDI G +VEFS DQHGSRFIQQKLE C
Sbjct: 596 NRGGASSIVDDLKRHSFLDELKSPNARKLELSDIAGRVVEFSVDQHGSRFIQQKLEHCSD 655
Query: 676 EDKALVFKEVLPRASKLMTDVFGNYVIQKFFEYGSPEQRRELADQLAGQILPLSLQMYGC 735
E+KA VF EVLP+ASKLMTDVFGNYVIQKF E+G+P QR EL QLAGQ++ LSLQMYGC
Sbjct: 656 EEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQREELVKQLAGQMVSLSLQMYGC 715
Query: 736 RVIQKALEVIDHDQKAQLVRELDGNVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHG 795
RVIQKALEVID DQK +L+RELDGNV++CVRDQNGNHVIQKCIES+P +IGF+++AF G
Sbjct: 716 RVIQKALEVIDVDQKTELIRELDGNVLKCVRDQNGNHVIQKCIESMPAGRIGFVIAAFRG 775
Query: 796 QVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEILESVCALAQDQYGNYVTQHVLERGK 855
QVA LS HPYGCRVIQR+LEHC+D+ + I+DEILES ALA DQYGNYVTQHVLERGK
Sbjct: 776 QVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEILESAFALAHDQYGNYVTQHVLERGK 835
Query: 856 PQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTM 915
P ER QII KL+G++VQ+SQHK+ASNVVEKCL + D ERE LI EI+G+ E++N+LL M
Sbjct: 836 PDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHADSTEREFLIEEIMGKSEEDNHLLAM 895
Query: 916 MKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQALKKYTYGKHIVARLEQQF 968
MKDQFANYVVQKV+++ + QR L+ +++H Q+L+KYTYGKHIVAR EQ F
Sbjct: 896 MKDQFANYVVQKVLEISKDQQREILVQRMKIHLQSLRKYTYGKHIVARFEQLF 948
>AT4G25880.2 | Symbols: APUM6, PUM6 | pumilio 6 |
chr4:13155518-13159078 FORWARD LENGTH=855
Length = 855
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/994 (44%), Positives = 567/994 (57%), Gaps = 165/994 (16%)
Query: 1 MATESPIRISEAGGKWPSHKEAATFGQPSHNMVTEDLGILLKGHRFHGRGHDVAPNRSGS 60
MATE+PIRIS + +W + ++ + PNRSGS
Sbjct: 1 MATENPIRISGSNERWSNSRKVSV------------------------------PNRSGS 30
Query: 61 APPSMEGSFLAIENLLHXXXXXXXXXXXXXXRAVQ-----NCESEEQLRASPAYLAYYSS 115
APP+MEGSFLA++NLL + + S+ L P+ YY +
Sbjct: 31 APPNMEGSFLAVDNLLSRQGGSVYNNLMLPRYGFEEPVTTHPSSKHSLNRIPSPPIYYPT 90
Query: 116 XXXXXXXXXXXXTSWENRHLGHHIGSFRDNGRF----SSDHGSKSSLSTHKEEPEDDSPK 171
E + + + +G FR N S H S+ LSTHKE ED+S +
Sbjct: 91 ---------------EYQFIDNRVGRFRSNQGLNKVNSPIHLSQGKLSTHKEVSEDESSQ 135
Query: 172 R-PYESELVKTTGVWHR--PGAASLTSQHKNAVDLIQEDFPRTMSPVYNKSPSASHGLVD 228
+ S +T G+ R PG+ SL D Q+D +P +++S ++S+G V+
Sbjct: 136 QLSVNSVSDRTDGLDIRLSPGSQSLA-------DFRQDDTSSGQTPQHSRS-NSSNGEVN 187
Query: 229 KXXXXXXXXXXXXXXXXXXXXXAQPTADE-GDIRLSSSFDTHAPVAXXXXXXXXXXMGFS 287
TADE G+ S V +G
Sbjct: 188 -------------------------TADESGNF---SELSDDVVVKDNAASTARASIGNE 219
Query: 288 DL-NVATIESQLKALSVSNLPNPESLSYEEKWKTIYQNNLMQRQVFPQQNNPYEVPSAN- 345
+ +TI S++K+ +N+ P + Y + + +RQ QQNN + +
Sbjct: 220 KSPDESTIISKMKS---TNISGPGTAKYPREPRY----GQPERQPHQQQNNATWIQGGSN 272
Query: 346 --SQSVNSAYVVREQFPQNSG-KFP-DVQPLLQSSGFTPPLY--ATAAAYMTSANPFYTN 399
S VN A + QF KF D QP+LQSSGFTPPL AT AYMTS Y N
Sbjct: 273 MGSHGVNDAVIGAGQFHYGQPYKFSGDGQPVLQSSGFTPPLLYTATQTAYMTSPAHVY-N 331
Query: 400 MQAPGIYTPQYVGGYTLNPTAIPQYITAYPPHGAVPLVDGASSSRYTPLTPGVSTGGSIS 459
MQ+P +Y+PQY GY IPQ++ YP HG+VP+V S + P G S GS+
Sbjct: 332 MQSPAVYSPQY--GYGPYTNMIPQFMPGYPSHGSVPVV---VSPDFIPQLSGPS-AGSVV 385
Query: 460 HGAEMVHANKYLGQFGYPMQPSFGDPYYMQYHQQPLMEGYGISGHFDPLAPRASDASQTS 519
HG EM +A K + P QPSF DP YMQY QQ G +PLAPR + T+
Sbjct: 386 HGGEMQYAEKL---YVPPGQPSFPDPMYMQYCQQSF-------GQMEPLAPR----NHTN 431
Query: 520 PYDSQKRPSTGAYLDDKRILDQRTGANINSRKGGSLTPSYFGHMPNMGFVMQYPNSPLPS 579
+SQK DD + L Q G + ++ + +Y+G PNMG ++QY LP+
Sbjct: 432 APESQK--------DDPKFLRQIRGPSNSNMARPGMGVNYYGIQPNMGIMVQY----LPT 479
Query: 580 PAFSGYPEGTLGLPGGRNEMKLSPASGRNGGILSGWQGQRSFDSAHDPKIVNFLEELKSG 639
LG P LSP GWQ Q S + A+ P++ NFLEELKSG
Sbjct: 480 ---------HLGPP-------LSPGHVPYVEAYPGWQPQGSLEGANGPRLCNFLEELKSG 523
Query: 640 KGRRFELSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGN 699
KGRRF+LSDI GHIVEFS RFIQQKLE C E+KA VF+E+LP A KLMTDVFGN
Sbjct: 524 KGRRFDLSDITGHIVEFS------RFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGN 577
Query: 700 YVIQKFFEYGSPEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRELDG 759
YVIQKFFEYG+ QR+ELADQL GQI+PLSLQMYGCRVIQKAL+VI+ DQ+ +L RELDG
Sbjct: 578 YVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDG 637
Query: 760 NVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTD 819
VMRCVRDQNGNHVIQKCIE+IP K+GF+L AF GQV++LSMHPYGCRVIQR+LE C+
Sbjct: 638 QVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSH 697
Query: 820 EVQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFA 879
+ QC+FI +EILESVC L++DQYGNYVTQHVLE+G +ER +I KLSGHIVQLS HKFA
Sbjct: 698 DHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFA 757
Query: 880 SNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRAT 939
SNV+EKCL YG ER+ +I EI G DE N+LL MMKDQ+ NYVVQK+ + C+ +QR T
Sbjct: 758 SNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLT 817
Query: 940 LLSHIRVHAQALKKYTYGKHIVARLEQ-QFEEDQ 972
L S +R+HA ALKKYTYGKHIV+RLEQ EE+Q
Sbjct: 818 LFSRVRMHASALKKYTYGKHIVSRLEQPSIEENQ 851
>AT4G25880.3 | Symbols: APUM6, PUM6 | pumilio 6 |
chr4:13155518-13159070 FORWARD LENGTH=858
Length = 858
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/987 (44%), Positives = 563/987 (57%), Gaps = 164/987 (16%)
Query: 1 MATESPIRISEAGGKWPSHKEAATFGQPSHNMVTEDLGILLKGHRFHGRGHDVAPNRSGS 60
MATE+PIRIS + +W + ++ + PNRSGS
Sbjct: 1 MATENPIRISGSNERWSNSRKVSV------------------------------PNRSGS 30
Query: 61 APPSMEGSFLAIENLLHXXXXXXXXXXXXXXRAVQ-----NCESEEQLRASPAYLAYYSS 115
APP+MEGSFLA++NLL + + S+ L P+ YY +
Sbjct: 31 APPNMEGSFLAVDNLLSRQGGSVYNNLMLPRYGFEEPVTTHPSSKHSLNRIPSPPIYYPT 90
Query: 116 XXXXXXXXXXXXTSWENRHLGHHIGSFRDNGRF----SSDHGSKSSLSTHKEEPEDDSPK 171
E + + + +G FR N S H S+ LSTHKE ED+S +
Sbjct: 91 ---------------EYQFIDNRVGRFRSNQGLNKVNSPIHLSQGKLSTHKEVSEDESSQ 135
Query: 172 R-PYESELVKTTGVWHR--PGAASLTSQHKNAVDLIQEDFPRTMSPVYNKSPSASHGLVD 228
+ S +T G+ R PG+ SL D Q+D +P +++S ++S+G V+
Sbjct: 136 QLSVNSVSDRTDGLDIRLSPGSQSL-------ADFRQDDTSSGQTPQHSRS-NSSNGEVN 187
Query: 229 KXXXXXXXXXXXXXXXXXXXXXAQPTADE-GDIRLSSSFDTHAPVAXXXXXXXXXXMGFS 287
TADE G+ S V +G
Sbjct: 188 -------------------------TADESGNF---SELSDDVVVKDNAASTARASIGNE 219
Query: 288 DL-NVATIESQLKALSVSNLPNPESLSYEEKWKTIYQNNLMQRQVFPQQNNPYEVPSAN- 345
+ +TI S++K+ +N+ P + Y + + +RQ QQNN + +
Sbjct: 220 KSPDESTIISKMKS---TNISGPGTAKYPREPRY----GQPERQPHQQQNNATWIQGGSN 272
Query: 346 --SQSVNSAYVVREQFPQNSG-KFP-DVQPLLQSSGFTPPLY--ATAAAYMTSANPFYTN 399
S VN A + QF KF D QP+LQSSGFTPPL AT AYMTS Y N
Sbjct: 273 MGSHGVNDAVIGAGQFHYGQPYKFSGDGQPVLQSSGFTPPLLYTATQTAYMTSPAHVY-N 331
Query: 400 MQAPGIYTPQYVGGYTLNPTAIPQYITAYPPHGAVPLVDGASSSRYTPLTPGVSTGGSIS 459
MQ+P +Y+PQY GY IPQ++ YP HG+VP+V S + P G S GS+
Sbjct: 332 MQSPAVYSPQY--GYGPYTNMIPQFMPGYPSHGSVPVV---VSPDFIPQLSGPS-AGSVV 385
Query: 460 HGAEMVHANKYLGQFGYPMQPSFGDPYYMQYHQQPLMEGYGISGHFDPLAPRASDASQTS 519
HG EM +A K + P QPSF DP YMQY QQ G +PLAPR + T+
Sbjct: 386 HGGEMQYAEKL---YVPPGQPSFPDPMYMQYCQQSF-------GQMEPLAPR----NHTN 431
Query: 520 PYDSQKRPSTGAYLDDKRILDQRTGANINSRKGGSLTPSYFGHMPNMGFVMQYPNSPLPS 579
+SQK DD + L Q G + ++ + +Y+G PNMG ++QY LP+
Sbjct: 432 APESQK--------DDPKFLRQIRGPSNSNMARPGMGVNYYGIQPNMGIMVQY----LPT 479
Query: 580 PAFSGYPEGTLGLPGGRNEMKLSPASGRNGGILSGWQGQRSFDSAHDPKIVNFLEELKSG 639
LG P LSP GWQ Q S + A+ P++ NFLEELKSG
Sbjct: 480 ---------HLGPP-------LSPGHVPYVEAYPGWQPQGSLEGANGPRLCNFLEELKSG 523
Query: 640 KGRRFELSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGN 699
KGRRF+LSDI GHIVEFS RFIQQKLE C E+KA VF+E+LP A KLMTDVFGN
Sbjct: 524 KGRRFDLSDITGHIVEFS------RFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGN 577
Query: 700 YVIQKFFEYGSPEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRELDG 759
YVIQKFFEYG+ QR+ELADQL GQI+PLSLQMYGCRVIQKAL+VI+ DQ+ +L RELDG
Sbjct: 578 YVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDG 637
Query: 760 NVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTD 819
VMRCVRDQNGNHVIQKCIE+IP K+GF+L AF GQV++LSMHPYGCRVIQR+LE C+
Sbjct: 638 QVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSH 697
Query: 820 EVQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFA 879
+ QC+FI +EILESVC L++DQYGNYVTQHVLE+G +ER +I KLSGHIVQLS HKFA
Sbjct: 698 DHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFA 757
Query: 880 SNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRAT 939
SNV+EKCL YG ER+ +I EI G DE N+LL MMKDQ+ NYVVQK+ + C+ +QR T
Sbjct: 758 SNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLT 817
Query: 940 LLSHIRVHAQALKKYTYGKHIVARLEQ 966
L S +R+HA ALKKYTYGKHIV+RLEQ
Sbjct: 818 LFSRVRMHASALKKYTYGKHIVSRLEQ 844
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 13/184 (7%)
Query: 788 FILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEILESVCALAQDQYGNYVT 847
F LS G + S R IQ+ LE+C E + + EIL C L D +GNYV
Sbjct: 528 FDLSDITGHIVEFS------RFIQQKLENCKPEEKAA-VFREILPHACKLMTDVFGNYVI 580
Query: 848 QHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDE 907
Q E G +R ++ +L G IV LS + V++K L + +R L E+ GQ
Sbjct: 581 QKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQ-- 638
Query: 908 QNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQALKKYTYGKHIVARLEQQ 967
++ ++DQ N+V+QK I+ ++ +L R +L + YG ++ RL ++
Sbjct: 639 ----VMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLER 694
Query: 968 FEED 971
D
Sbjct: 695 CSHD 698
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 848 QHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDE 907
Q LE KP+E++ + ++ H +L F + V++K YG+ +R+ L +++GQ
Sbjct: 545 QQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQ-- 602
Query: 908 QNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQALKKYTYGKHIVARLEQQ 967
++ + + V+QK +D+ +QR L + + G H++ + +
Sbjct: 603 ----IVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQNGNHVIQKCIEN 658
Query: 968 FEEDQ 972
D+
Sbjct: 659 IPADK 663
>AT2G29200.1 | Symbols: APUM1, PUM1 | pumilio 1 |
chr2:12549483-12553185 REVERSE LENGTH=968
Length = 968
Score = 505 bits (1300), Expect = e-143, Method: Compositional matrix adjust.
Identities = 286/627 (45%), Positives = 379/627 (60%), Gaps = 44/627 (7%)
Query: 354 VVREQFPQNSGKFPDVQPLLQSSGFTPPLYATAAAYMTSANPFYTNMQAPGIYTPQY-VG 412
V + +FP S + L++S P + + ANP+ + +P Y +
Sbjct: 352 VNQHEFPNKSDQAHKATGSLRNSQLRGPHGSAYNGGVGLANPYQQ------LDSPNYCLN 405
Query: 413 GYTLNPTAIPQYITAYPPHGAVPLVDGASSSRYTPLTPGVSTGGSISHGAEMVHANKYLG 472
Y LNP + P+ D S+ ++ + G +S G + + + LG
Sbjct: 406 NYALNPAVASMMANQLGNNNFAPMYDNVSALGFSGMDSRHHGRGFVSSGQNLSES-RNLG 464
Query: 473 QFGYPMQPSFGDPYYMQYHQQPLMEGYGISGHF-DPLAPRASDASQTSPYDSQKRPSTG- 530
+F M + G G+ H DP+ + +D+ S R G
Sbjct: 465 RFSNRM----------------MGGGAGLQSHMVDPMYNQYADSLDLLNDPSMDRNFMGG 508
Query: 531 -AYLDDKRILDQRTGA-----NINSRKGGSLTPSYFGHMPNMGFVMQYPNSPLPSPAFSG 584
+Y+D + GA + + G + SY+G P G M YP SPL A G
Sbjct: 509 SSYMDMLELQRAYLGAQKSQYGVPYKSGSPNSHSYYGS-PTFGSNMSYPGSPL---AHHG 564
Query: 585 YPEGTLG--LPGGRNEMKLS-PASGRN--GGILSGWQGQRSFDSAHDPKIVNFLEELKSG 639
P + P R+E+ + P++ RN GG++ W SFD + LEE KS
Sbjct: 565 MPNSLMSPYSPMRRDEVNMRFPSATRNYSGGLMGSWHMDASFDEGFGSSM---LEEFKSN 621
Query: 640 KGRRFELSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGN 699
K R FELS+I GH+VEFS+DQ+GSRFIQQKLET ++K +V++E++P+A LMTDVFGN
Sbjct: 622 KTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALVLMTDVFGN 681
Query: 700 YVIQKFFEYGSPEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRELDG 759
YVIQKFFE+G P QRRELA++L +LPLSLQMYGCRVIQKA+EV+D DQK ++V+ELDG
Sbjct: 682 YVIQKFFEHGLPPQRRELAEKLFDHVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDG 741
Query: 760 NVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTD 819
+VMRCVRDQNGNHV+QKCIE +P + I FI+S F G V LS HPYGCRVIQRVLEHC D
Sbjct: 742 HVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHD 801
Query: 820 EVQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFA 879
+++EIL +V LAQDQYGNYV QHVLE GKP ER+ II +L+G IVQ+SQ KFA
Sbjct: 802 PDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFA 861
Query: 880 SNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRAT 939
SNVVEKCL +G ERE L+ E++G ++N L MMKDQFANYVVQKV++ C + QR
Sbjct: 862 SNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQREL 921
Query: 940 LLSHIRVHAQALKKYTYGKHIVARLEQ 966
+L+ I+VH ALKKYTYGKH+VAR+E+
Sbjct: 922 ILTRIKVHLTALKKYTYGKHVVARIEK 948
>AT2G29140.1 | Symbols: APUM3, PUM3 | pumilio 3 |
chr2:12531392-12535060 FORWARD LENGTH=964
Length = 964
Score = 500 bits (1288), Expect = e-141, Method: Compositional matrix adjust.
Identities = 278/572 (48%), Positives = 357/572 (62%), Gaps = 33/572 (5%)
Query: 407 TPQYVGGYTLNPTAIPQYITAYPPHGAVPLVDGASSSRYTPLTPGVSTGGSISHGAEMVH 466
+P Y Y LNP + P+ + AS++ GGS + +
Sbjct: 394 SPNY---YALNPAVASMMANQLGTNNYSPMYENASATLGYSAMDSRLHGGSFVSSGQNLS 450
Query: 467 ANKYLGQFGYPM------QPS-FGDPYYMQYHQQPLMEGYGISGHFDPLAPRASDASQTS 519
++ +G+ G M PS DP Y QY + E + FD L + D + +
Sbjct: 451 ESRNIGRVGNRMMEGGTGHPSHLADPMYHQYAR--FSEN---ADSFDLLNDPSMDRNYGN 505
Query: 520 PYDSQKRPSTGAYLDDKRILDQRTGANINSRKGGSLTPSYFGHMPNMGFVMQYPNSPLPS 579
Y + AYL Q++ + + G + SY+G P G M YP SPL
Sbjct: 506 SYMNMLEIQR-AYLGS-----QKSQYGLPYKSGSPNSHSYYGS-PTFGSNMSYPGSPL-- 556
Query: 580 PAFSGYPEGTLG--LPGGRNEMKLS-PASGRN--GGILSGWQGQRSFDSAHDPKIVNFLE 634
A G P + P R E+ + PA+ RN GG++ W S D + LE
Sbjct: 557 -AHHGMPNSLMSPYSPMRRGEVNMRYPAATRNYTGGVMGSWHMDASLDEGFGSSM---LE 612
Query: 635 ELKSGKGRRFELSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMT 694
E KS K R FELS+I GH+VEFS+DQ+GSRFIQQKLET ++K +V++E++P+A LMT
Sbjct: 613 EFKSNKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPKALALMT 672
Query: 695 DVFGNYVIQKFFEYGSPEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLV 754
DVFGNYVIQKFFE+G P QRREL ++L +LPLSLQMYGCRVIQKA+EV+D DQK Q+V
Sbjct: 673 DVFGNYVIQKFFEHGLPPQRRELGEKLIDNVLPLSLQMYGCRVIQKAIEVVDLDQKIQMV 732
Query: 755 RELDGNVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVL 814
+ELDG+VMRCVRDQNGNHV+QKCIE +P + I FI+S F G V LS HPYGCRVIQRVL
Sbjct: 733 KELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVL 792
Query: 815 EHCTDEVQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLS 874
EHC + +++EIL +V L QDQYGNYV QHVLE GKP ER+ II +L+G IVQ+S
Sbjct: 793 EHCHNPDTQSKVMEEILSTVSMLTQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMS 852
Query: 875 QHKFASNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSE 934
Q KFASNVVEKCL +G ERE L+ E++G ++N L MMKDQFANYVVQKV++ C +
Sbjct: 853 QQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDD 912
Query: 935 NQRATLLSHIRVHAQALKKYTYGKHIVARLEQ 966
QR +L+ I+VH ALKKYTYGKHIVAR+E+
Sbjct: 913 QQRELILTRIKVHLNALKKYTYGKHIVARVEK 944
>AT2G29190.2 | Symbols: PUM2 | pumilio 2 | chr2:12544260-12548071
REVERSE LENGTH=972
Length = 972
Score = 487 bits (1254), Expect = e-137, Method: Compositional matrix adjust.
Identities = 272/576 (47%), Positives = 354/576 (61%), Gaps = 43/576 (7%)
Query: 407 TPQY-VGGYTLNPTAIPQYITAYPPHGAVPLVDGASSSR---YTPLTPGVSTGGSISHGA 462
+P Y + Y LNP + P+ + AS++ ++ + + GG +S G
Sbjct: 404 SPNYCLNNYGLNPAVASMMANQLGTNNYSPVYENASAASAMGFSGMDSRLHGGGYVSSGQ 463
Query: 463 EMVHANKYLGQF-------GYPMQPSFGDPYYMQYHQQPLMEGYGISGHFDPLAPRASDA 515
+ + + LG+F G +Q DP Y QY + D L + D
Sbjct: 464 NLSES-RNLGRFSNRMMGGGTGLQSHMADPMYHQY-----------ADSLDLLNDPSMDV 511
Query: 516 SQTSPYDSQKRPSTGAYLDDKRILDQRTGANINSRKGGSLTPSYFGHMPNMGFVMQYPNS 575
+ AYL Q++ + + G + + +G P G YP S
Sbjct: 512 NFMGNSYMNMLELQRAYLGA-----QKSQYGVPYKSGSPNSHTDYGS-PTFG---SYPGS 562
Query: 576 PLPSPAFSGYPEGTLG--LPGGRNEMKLS-PASGRN--GGILSGWQGQRSFDSAHDPKIV 630
PL A P + P R E+ + P++ RN GG++ W S D +
Sbjct: 563 PL---AHHLLPNSLVSPCSPMRRGEVNMRYPSATRNYAGGVMGSWHMDASLDEGFGSSM- 618
Query: 631 NFLEELKSGKGRRFELSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRAS 690
LEE KS K R FEL++I GH+VEFS+DQ+GSRFIQQKLET ++K +V++E++P A
Sbjct: 619 --LEEFKSNKTRGFELAEIAGHVVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHAL 676
Query: 691 KLMTDVFGNYVIQKFFEYGSPEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQK 750
LMTDVFGNYVIQKFFE+G P QRRELAD+L +LPLSLQMYGCRVIQKA+EV+D DQK
Sbjct: 677 ALMTDVFGNYVIQKFFEHGLPPQRRELADKLFDNVLPLSLQMYGCRVIQKAIEVVDLDQK 736
Query: 751 AQLVRELDGNVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVI 810
++V+ELDG+VMRCVRDQNGNHV+QKCIE +P + I FI+S F G V LS HPYGCRVI
Sbjct: 737 IKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVI 796
Query: 811 QRVLEHCTDEVQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHI 870
QRVLEHC D ++DEI+ ++ LAQDQYGNYV QHVLE GKP ER+ II +L+G I
Sbjct: 797 QRVLEHCHDPDTQSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKI 856
Query: 871 VQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVID 930
VQ+SQ KFASNVVEKCL +G ERE L+ E++G ++N L MMKDQFANYVVQKV++
Sbjct: 857 VQMSQQKFASNVVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLE 916
Query: 931 LCSENQRATLLSHIRVHAQALKKYTYGKHIVARLEQ 966
C + QR +L I+VH ALKKYTYGKHIVAR+E+
Sbjct: 917 TCDDQQRELILGRIKVHLNALKKYTYGKHIVARVEK 952
>AT2G29190.1 | Symbols: APUM2, PUM2 | pumilio 2 |
chr2:12544260-12548071 REVERSE LENGTH=972
Length = 972
Score = 487 bits (1254), Expect = e-137, Method: Compositional matrix adjust.
Identities = 272/576 (47%), Positives = 354/576 (61%), Gaps = 43/576 (7%)
Query: 407 TPQY-VGGYTLNPTAIPQYITAYPPHGAVPLVDGASSSR---YTPLTPGVSTGGSISHGA 462
+P Y + Y LNP + P+ + AS++ ++ + + GG +S G
Sbjct: 404 SPNYCLNNYGLNPAVASMMANQLGTNNYSPVYENASAASAMGFSGMDSRLHGGGYVSSGQ 463
Query: 463 EMVHANKYLGQF-------GYPMQPSFGDPYYMQYHQQPLMEGYGISGHFDPLAPRASDA 515
+ + + LG+F G +Q DP Y QY + D L + D
Sbjct: 464 NLSES-RNLGRFSNRMMGGGTGLQSHMADPMYHQY-----------ADSLDLLNDPSMDV 511
Query: 516 SQTSPYDSQKRPSTGAYLDDKRILDQRTGANINSRKGGSLTPSYFGHMPNMGFVMQYPNS 575
+ AYL Q++ + + G + + +G P G YP S
Sbjct: 512 NFMGNSYMNMLELQRAYLGA-----QKSQYGVPYKSGSPNSHTDYGS-PTFG---SYPGS 562
Query: 576 PLPSPAFSGYPEGTLG--LPGGRNEMKLS-PASGRN--GGILSGWQGQRSFDSAHDPKIV 630
PL A P + P R E+ + P++ RN GG++ W S D +
Sbjct: 563 PL---AHHLLPNSLVSPCSPMRRGEVNMRYPSATRNYAGGVMGSWHMDASLDEGFGSSM- 618
Query: 631 NFLEELKSGKGRRFELSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRAS 690
LEE KS K R FEL++I GH+VEFS+DQ+GSRFIQQKLET ++K +V++E++P A
Sbjct: 619 --LEEFKSNKTRGFELAEIAGHVVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHAL 676
Query: 691 KLMTDVFGNYVIQKFFEYGSPEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQK 750
LMTDVFGNYVIQKFFE+G P QRRELAD+L +LPLSLQMYGCRVIQKA+EV+D DQK
Sbjct: 677 ALMTDVFGNYVIQKFFEHGLPPQRRELADKLFDNVLPLSLQMYGCRVIQKAIEVVDLDQK 736
Query: 751 AQLVRELDGNVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVI 810
++V+ELDG+VMRCVRDQNGNHV+QKCIE +P + I FI+S F G V LS HPYGCRVI
Sbjct: 737 IKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVI 796
Query: 811 QRVLEHCTDEVQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHI 870
QRVLEHC D ++DEI+ ++ LAQDQYGNYV QHVLE GKP ER+ II +L+G I
Sbjct: 797 QRVLEHCHDPDTQSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKI 856
Query: 871 VQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVID 930
VQ+SQ KFASNVVEKCL +G ERE L+ E++G ++N L MMKDQFANYVVQKV++
Sbjct: 857 VQMSQQKFASNVVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLE 916
Query: 931 LCSENQRATLLSHIRVHAQALKKYTYGKHIVARLEQ 966
C + QR +L I+VH ALKKYTYGKHIVAR+E+
Sbjct: 917 TCDDQQRELILGRIKVHLNALKKYTYGKHIVARVEK 952
>AT3G10360.1 | Symbols: APUM4, PUM4 | pumilio 4 |
chr3:3211276-3215144 REVERSE LENGTH=1003
Length = 1003
Score = 459 bits (1182), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/411 (54%), Positives = 291/411 (70%), Gaps = 14/411 (3%)
Query: 558 SYFGHMPNMGFVMQYPNSPLPSPAFSGYPEGTLGLPGGRN--EMKLSPASGRNGGILSGW 615
S F P+ Y + LPSP+ RN M++S ++ G
Sbjct: 584 SRFFESPSYDLGNMYLGNHLPSPS-----------KNSRNFQNMRMSQSASMMKVPFGGL 632
Query: 616 QGQRSFDSAHDPKIVNFLEELKSGKGRRFELSDIIGHIVEFSADQHGSRFIQQKLETCGV 675
QG D + + LE K+ K R ELS+I+GH++EFS DQ+GSRFIQQKLET
Sbjct: 633 QGSSHVDIGSTAE-ASLLEGFKNNKTRSLELSEIVGHVIEFSMDQYGSRFIQQKLETATD 691
Query: 676 EDKALVFKEVLPRASKLMTDVFGNYVIQKFFEYGSPEQRRELADQLAGQILPLSLQMYGC 735
E+K +F E+LP LMTDVFGNYVIQKFFE+G+ +QR+ELA+Q+ G +L LSLQMYGC
Sbjct: 692 EEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTTKQRKELAEQVTGHVLALSLQMYGC 751
Query: 736 RVIQKALEVIDHDQKAQLVRELDGNVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHG 795
RVIQKALEV++ +Q+A++V+ELDG+VM+CV DQNGNHVIQKCIE +P I FI+S+F+G
Sbjct: 752 RVIQKALEVVELEQQARMVKELDGSVMKCVHDQNGNHVIQKCIERLPQDWIQFIISSFYG 811
Query: 796 QVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEILESVCALAQDQYGNYVTQHVLERGK 855
+V LS HPYGCRVIQRVLEH D + I++EI++SVC LAQDQYGNYV QH+++ GK
Sbjct: 812 KVLALSTHPYGCRVIQRVLEHIDDIETQRIIMEEIMDSVCTLAQDQYGNYVIQHIIQHGK 871
Query: 856 PQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTM 915
P ERS+II KL+G IV++SQ KFASNVVEKCL +G ER+ L+ E++G ++N L M
Sbjct: 872 PHERSEIINKLAGQIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAM 931
Query: 916 MKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQALKKYTYGKHIVARLEQ 966
MKD F NYVVQKV++ C + A +LS I+VH ALK+YTYGKHIVAR+E+
Sbjct: 932 MKDPFGNYVVQKVLETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEK 982
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 7/181 (3%)
Query: 790 LSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEILESVCALAQDQYGNYVTQH 849
LS G V SM YG R IQ+ LE TDE + I EIL L D +GNYV Q
Sbjct: 662 LSEIVGHVIEFSMDQYGSRFIQQKLETATDE-EKNAIFPEILPYGRTLMTDVFGNYVIQK 720
Query: 850 VLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDEQN 909
E G ++R ++ +++GH++ LS + V++K L ++ ++ ++ E+ G
Sbjct: 721 FFEHGTTKQRKELAEQVTGHVLALSLQMYGCRVIQKALEVVELEQQARMVKELDG----- 775
Query: 910 NNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQALKKYTYGKHIVARLEQQFE 969
+++ + DQ N+V+QK I+ ++ ++S AL + YG ++ R+ + +
Sbjct: 776 -SVMKCVHDQNGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHID 834
Query: 970 E 970
+
Sbjct: 835 D 835
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 45/191 (23%)
Query: 643 RFELSDIIGHIVEFSADQHGSRFIQQKLETCG-VEDKALVFKEVLPRASKLMTDVFGNYV 701
+F +S G ++ S +G R IQ+ LE +E + ++ +E++ L D +GNYV
Sbjct: 803 QFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIMEEIMDSVCTLAQDQYGNYV 862
Query: 702 IQKFFEYGSPEQRRELADQLAGQILPLSLQMY---------------------------- 733
IQ ++G P +R E+ ++LAGQI+ +S Q +
Sbjct: 863 IQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYT 922
Query: 734 --------------GCRVIQKALEVIDHDQKAQLVRELDGNVMRCVRDQNGNHVIQKCIE 779
G V+QK LE D A ++ + ++ R G H++ + +
Sbjct: 923 DENEPLQAMMKDPFGNYVVQKVLETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEK 982
Query: 780 SIPT--KKIGF 788
I T ++IG
Sbjct: 983 LITTGERRIGL 993
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 859 RSQIIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKD 918
RS + ++ GH+++ S ++ S +++ L E+ ++ EI+ T+M D
Sbjct: 658 RSLELSEIVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGR------TLMTD 711
Query: 919 QFANYVVQKVIDLCSENQRATLLSHIRVHAQALKKYTYGKHIVARLEQQFEEDQ 972
F NYV+QK + + QR L + H AL YG ++ + + E +Q
Sbjct: 712 VFGNYVIQKFFEHGTTKQRKELAEQVTGHVLALSLQMYGCRVIQKALEVVELEQ 765
>AT1G78160.1 | Symbols: APUM7, PUM7 | pumilio 7 |
chr1:29407900-29410184 FORWARD LENGTH=650
Length = 650
Score = 186 bits (473), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 182/323 (56%), Gaps = 13/323 (4%)
Query: 646 LSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKF 705
+ DI G++ + DQHG RF+Q+ + D ++F EV+ +LM D FGNY++QK
Sbjct: 331 MCDIQGYVYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKL 390
Query: 706 FEYGSPEQRREL---ADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVR-ELDGNV 761
+ + EQR ++ A + GQ++ +SL YG RV+Q+ +E I ++ LV+ L
Sbjct: 391 LDVCTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGF 450
Query: 762 MRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEV 821
+ ++D NGNHVIQ+C++ + T+ FI A ++ H +GC V+Q+ + + +
Sbjct: 451 LDLIKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQ- 509
Query: 822 QCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASN 881
Q + ++ EI + LAQD +GNY Q V+E P + ++ +L GH VQLS KF+S+
Sbjct: 510 QREKLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSH 569
Query: 882 VVEKCLVYGDVPE-RESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRATL 940
+VE+CL++ PE R ++ E++ + +++D +AN+V+Q + A+L
Sbjct: 570 MVERCLMH--CPESRPQIVRELVSVPHFDQ----LLQDPYANFVIQAALAATKGPLHASL 623
Query: 941 LSHIRVHAQALKKYTYGKHIVAR 963
+ IR H+ L+ Y K I +R
Sbjct: 624 VEVIRPHS-ILRNNPYCKRIFSR 645
>AT1G22240.1 | Symbols: APUM8, PUM8 | pumilio 8 |
chr1:7853084-7854963 FORWARD LENGTH=515
Length = 515
Score = 186 bits (471), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 183/324 (56%), Gaps = 13/324 (4%)
Query: 645 ELSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQK 704
++S+ G++ + DQHG RF+Q E D ++F EV+P +LM D FGNY++QK
Sbjct: 195 KVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYLMQK 254
Query: 705 FFEYGSPEQRRELADQLA---GQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRE-LDGN 760
+ + EQR ++ + GQ++ +SL YG RV+Q+ +E I ++ LV+ L
Sbjct: 255 LLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSALRPG 314
Query: 761 VMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDE 820
+ +RD NGNHVIQ+C++ + T+ FI +++ H +GC V+Q+ + + +
Sbjct: 315 FLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAY-SSG 373
Query: 821 VQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFAS 880
+Q + +V EI + LAQD YGNY Q VLE + ++ +L GH V+LS KF+S
Sbjct: 374 LQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQKFSS 433
Query: 881 NVVEKCLVYGDVPE-RESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRAT 939
++VE+CL + PE R ++ E+I + +++D +AN+V+Q + + + AT
Sbjct: 434 HMVERCLTH--CPESRPQIVRELISVPHFD----ILIQDPYANFVIQAALAVTKGSLHAT 487
Query: 940 LLSHIRVHAQALKKYTYGKHIVAR 963
L+ IR H+ L+ Y K I +R
Sbjct: 488 LVEVIRPHS-ILRNNPYCKRIFSR 510
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 6/196 (3%)
Query: 623 SAHDPKIV-NFLEELKSGKGRRFELSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALV 681
+A+ ++V +E +K+ K S + + D +G+ IQ+ L+ ED +
Sbjct: 284 NAYGTRVVQRLVESIKTRKQISLVKSALRPGFLNLIRDLNGNHVIQRCLQCLSTEDNEFI 343
Query: 682 FKEVLPRASKLMTDVFGNYVIQKFFEYGSPEQRRELADQLAGQILPLSLQMYGCRVIQKA 741
F++ + T G V+QK Y S QR +L +++ L L+ YG +Q
Sbjct: 344 FEDATKFCIDIATHRHGCCVLQKCIAYSSGLQREKLVTEISRNSLFLAQDPYGNYAVQFV 403
Query: 742 LEVIDHDQKAQLVRELDGNVMRCVRDQNGNHVIQKCIESIPTKK---IGFILSAFHGQVA 798
LE+ D A ++ +L G+ + + +H++++C+ P + + ++S H +
Sbjct: 404 LELRDFSAIAAMLAQLKGHYVELSMQKFSSHMVERCLTHCPESRPQIVRELISVPHFDI- 462
Query: 799 NLSMHPYGCRVIQRVL 814
L PY VIQ L
Sbjct: 463 -LIQDPYANFVIQAAL 477
>AT5G56510.1 | Symbols: APUM12, PUM12 | pumilio 12 |
chr5:22881721-22883842 FORWARD LENGTH=596
Length = 596
Score = 172 bits (437), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 168/318 (52%), Gaps = 9/318 (2%)
Query: 651 GHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKFFEYGS 710
G I + DQHG RF+Q+ D ++F E++ S+LM D FGNY++QK E +
Sbjct: 280 GKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQKLLEVCN 339
Query: 711 PEQRRELADQLA---GQILPLSLQMYGCRVIQKALEVIDHDQKAQLV-RELDGNVMRCVR 766
+QR ++ + G ++ +S M+G R +QK +E +++ ++ L ++ ++
Sbjct: 340 EDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKHGIVHLIK 399
Query: 767 DQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFI 826
+ NGNHV+Q+C++ + F+ A L+ +GC V+Q+ L + E Q Q +
Sbjct: 400 NVNGNHVVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEGE-QKQHL 458
Query: 827 VDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKC 886
V EI + L+QD +GNYV Q+V E +I+ +L G+ +LS K +SNVVEKC
Sbjct: 459 VSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSNVVEKC 518
Query: 887 LVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRV 946
L D R +I E+I L +M D + NYV+Q + N A L+ I++
Sbjct: 519 LKLADDKHRARIIRELINY----GRLDQVMLDPYGNYVIQAALKQSKGNVHALLVDAIKL 574
Query: 947 HAQALKKYTYGKHIVARL 964
+ +L+ YGK +++ L
Sbjct: 575 NISSLRTNPYGKKVLSAL 592
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 2/170 (1%)
Query: 643 RFELSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVI 702
+F I H VE + D+HG +Q+ L E K + E+ A L D FGNYV+
Sbjct: 420 KFLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQKQHLVSEIASNALLLSQDPFGNYVL 479
Query: 703 QKFFEYGSPEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRELD--GN 760
Q FE E+ +QL G LS+Q V++K L++ D +A+++REL G
Sbjct: 480 QYVFELQLQWATFEILEQLEGNYTELSMQKCSSNVVEKCLKLADDKHRARIIRELINYGR 539
Query: 761 VMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVI 810
+ + + D GN+VIQ ++ ++ A +++L +PYG +V+
Sbjct: 540 LDQVMLDPYGNYVIQAALKQSKGNVHALLVDAIKLNISSLRTNPYGKKVL 589
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 92/223 (41%), Gaps = 47/223 (21%)
Query: 749 QKAQLVRELDGNVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCR 808
QK + E G + +DQ+G +Q+ I I + ++ L M P+G
Sbjct: 270 QKYNSIAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNY 329
Query: 809 VIQRVLEHCTDEVQCQFIVDEILES---VCALAQDQYGNYVTQHVLERGKPQERSQII-- 863
++Q++LE C ++ + Q IV I + ++ D +G Q ++E K +E II
Sbjct: 330 LVQKLLEVCNEDQRMQ-IVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIIS 388
Query: 864 ------------------------------GKL-----SGHIVQLSQHKFASNVVEKCLV 888
GK H V+L+ + V++KCL
Sbjct: 389 ALKHGIVHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLG 448
Query: 889 YGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDL 931
Y + +++ L++EI N L + +D F NYV+Q V +L
Sbjct: 449 YSEGEQKQHLVSEIAS------NALLLSQDPFGNYVLQYVFEL 485
>AT4G08840.1 | Symbols: APUM11, PUM11 | pumilio 11 |
chr4:5631298-5633779 FORWARD LENGTH=556
Length = 556
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 173/322 (53%), Gaps = 13/322 (4%)
Query: 646 LSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKF 705
+ D G + + DQ G R +Q+ ++ D ++FKEV+ +L TD FGNY+IQK
Sbjct: 239 MVDSYGSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQKL 298
Query: 706 FEYGSPEQRRELADQLA---GQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRE-LDGNV 761
E + EQR ++ +L G ++ +S+ YG RV+QK +E + ++ LV+ L
Sbjct: 299 IEVCNEEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLVKSALVPGF 358
Query: 762 MRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEV 821
+ R+ NGNHVI C++ FIL A ++ +GC V+QR + + E
Sbjct: 359 LSLFRELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGE- 417
Query: 822 QCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASN 881
Q + +VDEI + LAQD +GNY+ Q+++E K ++ +L G+ V+L+ KF S+
Sbjct: 418 QHEKLVDEISRNSLLLAQDPFGNYLVQYIIE--KKVGGVNVLFELRGNYVKLATQKFGSH 475
Query: 882 VVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRATLL 941
VVEKCL Y PE S +I+ + N +++D +ANYV+Q + RA+L+
Sbjct: 476 VVEKCLRY--YPESRS---QIVNELVSVLNFGYLLQDPYANYVIQCALSKTKGFVRASLV 530
Query: 942 SHIRVHAQALKKYTYGKHIVAR 963
+R + + LK Y K I ++
Sbjct: 531 EKVRRY-ENLKMTPYCKRIFSK 551
>AT1G35730.1 | Symbols: APUM9, PUM9 | pumilio 9 |
chr1:13227324-13229796 REVERSE LENGTH=564
Length = 564
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 171/326 (52%), Gaps = 16/326 (4%)
Query: 646 LSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKF 705
+ +I G + + DQ G R +Q+ +E + ++ ++ +L D FGNY++QK
Sbjct: 247 MVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNYIVQKL 306
Query: 706 FEYGSPEQRRELADQLAG---QILPLSLQMYGCRVIQKALEVIDHDQKAQLVRE-LDGNV 761
F+ EQR + L +++ + L YG RV+QK +E + Q+ LV+ L
Sbjct: 307 FDVSDEEQRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPGF 366
Query: 762 MRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEV 821
+ V+D NGNHVIQ C++++ F+L A A +++H +GC V+Q + + +
Sbjct: 367 LALVKDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCISNSVG-L 425
Query: 822 QCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASN 881
Q + +V EI + L+QD +GNYV Q++++ + +++ + H +L+ KF+S+
Sbjct: 426 QRERLVAEISRNSLHLSQDPFGNYVVQYLID--QQVSAVKLLVQFRMHYAELATQKFSSH 483
Query: 882 VVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRATLL 941
V+EKCL PE AEI+ + N +++D +ANYV+Q + + RA L+
Sbjct: 484 VIEKCL--RKYPESR---AEIVRELLCVPNFEYLLQDPYANYVIQTALSVTKGPVRAKLV 538
Query: 942 SHI----RVHAQALKKYTYGKHIVAR 963
+ + ++H+ K + K I+ +
Sbjct: 539 AKVYRYGKLHSSPYCKKIFSKTILKK 564
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 131/270 (48%), Gaps = 15/270 (5%)
Query: 710 SPEQRRELAD--QLAGQILPLSLQMYGCRVIQKALEV-IDHDQKAQLVRELDGNVMRCVR 766
SP+ +L ++ G + ++ GCRV+QK +E H+ K L+ +D +V+
Sbjct: 237 SPKSNNDLVSMVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIID-HVVELSM 295
Query: 767 DQNGNHVIQKCIESIPTKKIGFILSAFHG---QVANLSMHPYGCRVIQRVLEHCTDEVQC 823
D GN+++QK + ++ I+S ++ + ++ YG RV+Q+++E + Q
Sbjct: 296 DPFGNYIVQKLFDVSDEEQRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQI 355
Query: 824 QFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVV 883
+ + AL +D GN+V Q L+ P + ++ + + +++ H+ V+
Sbjct: 356 ALVKSGLKPGFLALVKDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVL 415
Query: 884 EKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSH 943
+ C+ +RE L+AEI + N L + +D F NYVVQ +ID + LL
Sbjct: 416 QCCISNSVGLQRERLVAEI------SRNSLHLSQDPFGNYVVQYLID--QQVSAVKLLVQ 467
Query: 944 IRVHAQALKKYTYGKHIVARLEQQFEEDQS 973
R+H L + H++ + +++ E ++
Sbjct: 468 FRMHYAELATQKFSSHVIEKCLRKYPESRA 497
>AT1G35750.1 | Symbols: APUM10, PUM10 | pumilio 10 |
chr1:13253398-13255570 REVERSE LENGTH=528
Length = 528
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 163/322 (50%), Gaps = 13/322 (4%)
Query: 646 LSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKF 705
+ +I G + + DQ G R +Q+ +E V D ++F E++ +L D GNY++QK
Sbjct: 211 MVEIYGSVNLMARDQIGCRALQKLVEEGTVLDSKVIFLEIIDHVVELSMDPLGNYIVQKL 270
Query: 706 FEYGSPEQRRELADQLAG---QILPLSLQMYGCRVIQKALEVIDHDQKAQLVRE-LDGNV 761
EQR + L +++ + L G RVIQK ++ + Q+ LV+ L+
Sbjct: 271 LVVSDEEQRTMIVSVLTSKPRELIKICLNTNGTRVIQKMIKTVKTKQQIALVKSALEPGF 330
Query: 762 MRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEV 821
+ V D NG HV+Q C+E + F++ A A L+ H YGC V+Q L + T +
Sbjct: 331 LVLVNDSNGYHVLQSCLEFLVPNDNKFVVEAATEYCAQLATHQYGCYVLQCSLIN-TVGL 389
Query: 822 QCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASN 881
Q + +V EI L+QD +GNYV Q +++ + ++ H ++L+ KF+S+
Sbjct: 390 QHERLVAEISRDSLRLSQDPFGNYVVQCLID--QQVSSVNLLLPFRTHCIELATQKFSSH 447
Query: 882 VVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRATLL 941
V+EKCL PE AEI+ + N +++D +ANYV+Q + + RA L+
Sbjct: 448 VIEKCL--RKYPESR---AEIVRELLSYPNFEQLLQDPYANYVIQTALSVTKGAVRARLV 502
Query: 942 SHIRVHAQALKKYTYGKHIVAR 963
++ + L+ Y K I ++
Sbjct: 503 EKVKRFGK-LQSNPYCKKIFSK 523
>AT5G43090.1 | Symbols: APUM13, PUM13 | pumilio 13 |
chr5:17295933-17298171 FORWARD LENGTH=527
Length = 527
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 150/341 (43%), Gaps = 33/341 (9%)
Query: 636 LKSGKGRRFELSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTD 695
+++G+G F ++ D+ S+ +++ + E ++F ++ +LM D
Sbjct: 206 MENGRGSYFSIA----------TDRVWSKELEKTIFVGTKETIDMIFDGLIVGICELMVD 255
Query: 696 VFGNYVIQKFFEYGSPEQRRELADQLAGQI---LPLSLQMYGCRVIQKALEVIDHDQKAQ 752
FGN V++ S EQ + D + I + + G IQ L I Q
Sbjct: 256 PFGNDVVKLLIGKCSSEQIILIVDVVTRHISKFVNICFNPIGTLAIQVLLTSIHERANNQ 315
Query: 753 LVRELDG---NVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRV 809
+ R +D ++ R+ N +VI C + + +L +++ GC +
Sbjct: 316 IPRIMDAISSVALQLTRNTNAKYVILACFRMFTSSQCRRLLEVVSQHCYQIAIDQNGCCL 375
Query: 810 IQRVLEHCTDEVQC------QFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQII 863
+Q+ C D+ + Q ++ E++E L + +GNYV Q+V+E E ++
Sbjct: 376 LQQ----CFDKERVPNHEIRQRLISEVIEHALKLCLNCHGNYVVQYVVELDNQHETDLLV 431
Query: 864 GKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANY 923
KL + L+++K+ S+VV+K L + + ++ + G D T++ D F NY
Sbjct: 432 NKLLRNYAHLARNKYGSHVVQKLLKLRGIDSKLIVVDLLRGID-------TLLLDPFGNY 484
Query: 924 VVQKVIDLCSENQRATLLSHIRVHAQALKKYTYGKHIVARL 964
V+Q + E+ R L +I + + ++ +G I+ +L
Sbjct: 485 VIQTAWFVSKEDVRQMLRYYIERNIRLMRCNKFGNKILEKL 525
>AT5G43110.1 | Symbols: APUM14, PUM14 | pumilio 14 |
chr5:17309842-17311937 FORWARD LENGTH=518
Length = 518
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 131/295 (44%), Gaps = 22/295 (7%)
Query: 681 VFKEVLPRASKLMTDVFGNYVIQKFFEYGSPEQRRELAD---QLAGQILPLSLQMYGCRV 737
++ ++ +LM D +G+ V+Q S EQ +L D Q Q + + + G
Sbjct: 233 IYNGLIGDICELMVDPYGSDVVQLLMRRCSSEQIVQLVDIVTQQMFQFVNICIDSLGTNA 292
Query: 738 IQKALEVIDHDQKAQLVRELDGNVMRCVRDQ--NGNH---VIQKCIESIPTKKIGFILSA 792
IQ L I+ K Q+ R +D V+R V Q NH VI C P +L
Sbjct: 293 IQVLLTCINERAKDQIPRIVD--VVRTVALQLSKSNHAIFVILACFRLFPLH-CRLLLEL 349
Query: 793 FHGQVANLSMHPYGCRVIQRVLEHC---TDEVQCQFIVDEILESVCALAQDQYGNYVTQH 849
+++ +GC ++Q E++ + I++ I ++ L + YGNYV Q+
Sbjct: 350 IVQNCHQIAIDQHGCCLLQLCFNKDRVPNLEIRQRLIMEAIANAL-RLCLNCYGNYVVQY 408
Query: 850 VLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDEQN 909
++E ++ +L G+ L+++K+ S+ V+K L + R +I + D
Sbjct: 409 IVELNNRYLIDALVRQLIGNYAHLARNKYGSHAVQKLLKLRWIDSRVIVIDLLREID--- 465
Query: 910 NNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQALKKYTYGKHIVARL 964
T++ D F NYV+Q + ++ R L HI + ++ +G ++ +L
Sbjct: 466 ----TLLLDPFGNYVIQTAWFVSKDDVRRMLRYHIERNIPMMRCNKFGNKVLEKL 516
>AT5G59280.1 | Symbols: APUM16, PUM16 | pumilio 16 |
chr5:23914141-23915139 REVERSE LENGTH=332
Length = 332
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Query: 805 YGCRVIQRVLEHCTDEVQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIG 864
YGC + ++ D ++D + + L+ D YGN+V QHVL+ + I
Sbjct: 166 YGCIALNEIITDLDDPYYRDQLLDIVANNALLLSNDAYGNFVVQHVLKLRDSRCTRNIAD 225
Query: 865 KLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYV 924
KL G+ V+LS K+ S +VE+ L GDVP ++ + + E L+ + + ++ N+V
Sbjct: 226 KLCGYCVELSFKKYGSYIVERLLEAGDVPMATVVLDLLACKTEM---LIRLARSEYGNFV 282
Query: 925 VQKVIDLCSENQRATLL 941
V K ++L +E A L
Sbjct: 283 VCKALELTNEILTADLF 299
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 652 HIVEFSADQHGSRFIQQKLETCGVEDK--ALVFKEVLPRASKLMTDVFGNYVIQKFFEYG 709
+ + + +++GS+ +Q+ + G+ D F+ ++ +MTD + +YV +
Sbjct: 86 YFMVITTNKNGSKTLQKLM---GMSDDMDVFFFEAIMRLFIHVMTDKYASYVTIQGMRVF 142
Query: 710 SPEQRRELADQLAGQILPLSLQMYGCRVIQKALEVIDHDQ-KAQLVRELDGNVMRCVRDQ 768
++R + DQ+ L+ YGC + + + +D + QL+ + N + D
Sbjct: 143 QQDKRELMYDQILRYACFLAGDQYGCIALNEIITDLDDPYYRDQLLDIVANNALLLSNDA 202
Query: 769 NGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVD 828
GN V+Q ++ ++ I G LS YG +++R+LE +V +V
Sbjct: 203 YGNFVVQHVLKLRDSRCTRNIADKLCGYCVELSFKKYGSYIVERLLE--AGDVPMATVVL 260
Query: 829 EIL----ESVCALAQDQYGNYVTQHVLE 852
++L E + LA+ +YGN+V LE
Sbjct: 261 DLLACKTEMLIRLARSEYGNFVVCKALE 288
>AT4G08560.1 | Symbols: APUM15, PUM15 | pumilio 15 |
chr4:5450434-5453183 FORWARD LENGTH=477
Length = 477
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 119/260 (45%), Gaps = 22/260 (8%)
Query: 681 VFKEVLPRASKLMTDVFGNYVIQKFFEYGSPEQRRELADQLA---GQILPLSLQMYGCRV 737
+F ++ +LM D +G+ V +K E + EQ + D + + + L + +G
Sbjct: 183 IFDNLISHVCELMLDYYGHKVFRKLMEKCTDEQITRVLDIVLEEPFEFVRLCVHTHGTHA 242
Query: 738 IQKALE-VIDHDQKAQLVRELDGNVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQ 796
IQ + + +Q ++ + L + +D + VI C ++L
Sbjct: 243 IQGLMRSLCSEEQISRFMETLCYVSLLLTKDVIAHRVILFCFNQFSPSHTRYLLEVIVQN 302
Query: 797 VANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEILESVCALAQDQYG----------NYV 846
+++ GC ++++++ + E++ ++ EI+ L + YG NYV
Sbjct: 303 CYQVAIDQNGCCMLKKLIRQSSRELR-DPLIKEIISIAVRLCGNCYGTLTPKSLLVRNYV 361
Query: 847 TQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQD 906
Q++L + S + L G+ VQLS K+ S+VV+KCL + R +IAE++
Sbjct: 362 VQYLLRLKDYEVTSALSKHLDGNYVQLSYDKYGSHVVQKCLESREFSSRR-IIAELL--- 417
Query: 907 EQNNNLLTMMKDQFANYVVQ 926
+++ +++ D + +YV+Q
Sbjct: 418 ---SDIDSLLVDPYGDYVIQ 434
>AT5G09610.1 | Symbols: APUM21, PUM21 | pumilio 21 |
chr5:2981156-2982709 FORWARD LENGTH=517
Length = 517
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 17/242 (7%)
Query: 725 ILPLSLQMYG---CRVIQKALEVIDHDQKAQLVRELDGNVMRCVRDQNGNHVIQKCIESI 781
L L+ YG R++ + +DH L +D N + D+ G +I I ++
Sbjct: 263 FLHLATNQYGSQALRILFRRSPSLDH----LLFCAVDTNFFLLMSDKYGRGLIIPAIRAV 318
Query: 782 PTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEILESVCALAQDQ 841
K + + +L+ GC + VL+ + I + + + L+ D
Sbjct: 319 DKTKKESLYKLTYEYTLHLARLETGCLALNNVLQEIRG-IYRDLIFECVANNADWLSFDP 377
Query: 842 YGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAE 901
YG +V Q++L P + I +L G +L+ + S VVEKCL D R+ ++ E
Sbjct: 378 YGTHVVQNILILQNPVATTAIAERLRGSFFRLAMERQGSYVVEKCLK-SDF-ARDQVLEE 435
Query: 902 IIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQALKKYTYGKHIV 961
G ++ + M D+F N+VVQ + + E + LL R + L+ + +GK +
Sbjct: 436 FRGNAKE---WVRMTTDKFGNFVVQSALRVMKEKEMRPLL---REFVEKLRPH-FGKMEI 488
Query: 962 AR 963
R
Sbjct: 489 GR 490
>AT1G35850.1 | Symbols: APUM17, PUM17 | pumilio 17 |
chr1:13330510-13331506 FORWARD LENGTH=304
Length = 304
Score = 63.2 bits (152), Expect = 8e-10, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 800 LSMHPYGCRVIQRVLEHCTDEVQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQER 859
L+ YGC + +++ D ++D + + L+ D YGN+V QHVL+ +
Sbjct: 133 LARDQYGCIALNEIIKELDDPYYRDELMDIVSNNALLLSNDAYGNFVVQHVLKLHDSRCT 192
Query: 860 SQIIGKLSGHIVQLSQHKFASNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQ 919
I KL G+ V+LS K+ S +VE+ L D+P ++ + + E L+ + + +
Sbjct: 193 GNIADKLCGYCVELSFKKYGSYIVERLLEVRDIPMATIVLDLLACKTEM---LIRLARSE 249
Query: 920 FANYVVQKVIDLCSENQRA----TLLSHIRVHAQALKKYTYGKHIVARL 964
N+VV K+++L ++ A +L++ +R + L ++ K IVA L
Sbjct: 250 NGNFVVCKLLELTNDILTADLFYSLVNKLRPYRFLLHRFPESK-IVAIL 297
Score = 51.2 bits (121), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 7/166 (4%)
Query: 692 LMTDVFGNYVIQKFFEYGSPEQRRELADQLAGQILPLSLQMYGCRVIQKAL-EVIDHDQK 750
+M D + +YV + ++R + D + L L+ YGC + + + E+ D +
Sbjct: 97 VMIDKYASYVAIQGMRIFKQDKRELMYDHILRYALFLARDQYGCIALNEIIKELDDPYYR 156
Query: 751 AQLVRELDGNVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVI 810
+L+ + N + D GN V+Q ++ ++ G I G LS YG ++
Sbjct: 157 DELMDIVSNNALLLSNDAYGNFVVQHVLKLHDSRCTGNIADKLCGYCVELSFKKYGSYIV 216
Query: 811 QRVLEHCTDEVQCQFIVDEIL----ESVCALAQDQYGNYVTQHVLE 852
+R+LE ++ IV ++L E + LA+ + GN+V +LE
Sbjct: 217 ERLLE--VRDIPMATIVLDLLACKTEMLIRLARSENGNFVVCKLLE 260
>AT1G21620.1 | Symbols: APUM20, PUM20 | pumilio 20 |
chr1:7579129-7580171 FORWARD LENGTH=308
Length = 308
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 19/212 (8%)
Query: 766 RDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQF 825
R+ NG+ IQK + F +A + ++ Y V++R + D+ + +
Sbjct: 99 RNMNGSKRIQKLLGKTDDVDALFA-AAILRRFLHIITDKYASYVVRRGMT-VFDKKKKKA 156
Query: 826 IVDEIL---------ESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQH 876
+ + IL + L+ D YGN+V Q VL+ + ++ I+ L GH V LS
Sbjct: 157 MYEHILHYASHIARDKHALVLSNDAYGNFVIQRVLKLNDLRSKNNIVVSLRGHFVDLSFQ 216
Query: 877 KFASNVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQ 936
K+ S VV+ L + E ++ E + + E + L+ + ++++ N++V K + + +
Sbjct: 217 KYGSYVVDVLL---ETKESMVVVVEELMECE-GDMLMRLARNEYGNFLVCKALRVTQKEM 272
Query: 937 RATLLSHIRVHA----QALKKYTYGKHIVARL 964
T L VH L +++ GK+I + L
Sbjct: 273 VRTDLFWGLVHKLKPFHNLLRWSRGKNIASIL 304
>AT5G60110.1 | Symbols: APUM18, PUM18 | pumilio 18 |
chr5:24201954-24202937 FORWARD LENGTH=327
Length = 327
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 98/233 (42%), Gaps = 17/233 (7%)
Query: 660 QHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKFFEYGSPEQRRELAD 719
+ GSR +Q+ L D A +L R + TD + +YV + ++ L +
Sbjct: 91 KFGSRRVQKLLGKSDDVD-AFFCAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYE 149
Query: 720 QLAGQILPLSLQMYGCRVIQKALEVIDHDQ---KAQLVRELDGNVMRCVRDQNGNHVIQK 776
++ L L+ +GC + + D D + QL+ + N +R D +GN V+Q
Sbjct: 150 RILYHALDLACDQHGCIALNDI--ITDADDPYYRDQLLELVASNALRLSNDASGNFVVQH 207
Query: 777 CIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIV-----DEIL 831
+ ++ I I +GQ LS YG +++++LE V + D ++
Sbjct: 208 VLTLYDSRCIHNIAVNLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLM 267
Query: 832 ESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHI--VQLSQHKFASNV 882
LA++++GN+V L K G + + ++L + SN+
Sbjct: 268 R----LARNEFGNFVVVKALRFTKMSRMDLFWGLVQKLMPFIRLLRRSHGSNI 316
>AT5G60180.1 | Symbols: APUM19, PUM19 | pumilio 19 |
chr5:24233024-24234007 REVERSE LENGTH=327
Length = 327
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 15/213 (7%)
Query: 660 QHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKFFEYGSPEQRRELAD 719
+ GSR +Q+ L D A +L R + TD + +YV + ++ L +
Sbjct: 91 KFGSRRVQKLLGKSDDVD-AFFCAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYE 149
Query: 720 QLAGQILPLSLQMYGCRVIQKALEVIDHDQ---KAQLVRELDGNVMRCVRDQNGNHVIQK 776
++ L L+ +GC + + D D + QL+ + N +R D +GN V+Q
Sbjct: 150 RILYHALDLACDQHGCIALNDI--ITDADDPYYRDQLLELVVSNALRLSNDASGNFVVQH 207
Query: 777 CIESIPTKKIGFILSAFHGQVANLSMHPYGCRVIQRVLEHCTDEVQCQFIV-----DEIL 831
+ ++ I I +GQ LS YG +++++LE V + D ++
Sbjct: 208 VLTLYDSRCIHNIAVNLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLM 267
Query: 832 ESVCALAQDQYGNYVTQHVLERGKPQERSQIIG 864
LA++++GN+V L K G
Sbjct: 268 R----LARNEFGNFVVVKALRFTKEMRMDLFWG 296