Miyakogusa Predicted Gene
- Lj6g3v1333090.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1333090.1 tr|Q6EUQ6|Q6EUQ6_ORYSJ Os02g0175700 protein
OS=Oryza sativa subsp. japonica GN=OJ1077_E05.14 PE=2
SV,58.51,2e-18,CLATHRIN ASSEMBLY PROTEIN,NULL,CUFF.59353.1
(116 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G25940.1 | Symbols: | ENTH/ANTH/VHS superfamily protein | ch... 108 8e-25
AT5G57200.1 | Symbols: | ENTH/ANTH/VHS superfamily protein | ch... 98 1e-21
AT5G35200.1 | Symbols: | ENTH/ANTH/VHS superfamily protein | ch... 81 1e-16
AT1G14910.1 | Symbols: | ENTH/ANTH/VHS superfamily protein | ch... 69 7e-13
AT2G01600.1 | Symbols: | ENTH/ANTH/VHS superfamily protein | ch... 69 8e-13
AT2G25430.1 | Symbols: | epsin N-terminal homology (ENTH) domai... 50 3e-07
AT4G32285.2 | Symbols: | ENTH/ANTH/VHS superfamily protein | ch... 46 6e-06
AT4G32285.1 | Symbols: | ENTH/ANTH/VHS superfamily protein | ch... 46 6e-06
>AT4G25940.1 | Symbols: | ENTH/ANTH/VHS superfamily protein |
chr4:13169792-13172700 REVERSE LENGTH=601
Length = 601
Score = 108 bits (270), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/120 (58%), Positives = 79/120 (65%), Gaps = 15/120 (12%)
Query: 1 MALAILPPDGHNP---NNLALSSIGGTTGWELALVTAPSNHTNQAPDR----KMAGGFDK 53
+ALAI PP P N L+L GG+ GWELALVT +N+ N P K+AGGFD
Sbjct: 413 LALAIYPPGHEAPGPSNILSLIETGGS-GWELALVTPQNNNNNNNPRPAPNTKLAGGFDN 471
Query: 54 LLLDSLYEDDNARRQHQLQMAGYGHGGVPVE----NPFDHYNQQHDPFAMSSNIAPPTNV 109
LLLDSLYEDD+ARRQ QL AGYGHGG+ NPF Q DPFAMS+NIAPPTNV
Sbjct: 472 LLLDSLYEDDSARRQIQLTNAGYGHGGIDTTAAPPNPF---QMQQDPFAMSNNIAPPTNV 528
>AT5G57200.1 | Symbols: | ENTH/ANTH/VHS superfamily protein |
chr5:23177696-23180601 FORWARD LENGTH=591
Length = 591
Score = 97.8 bits (242), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 77/124 (62%), Gaps = 18/124 (14%)
Query: 1 MALAILPPDGHN----PNNLALSSIGGTTGWELALVTAPSNHTNQAPDR-----KMAGGF 51
+LAI PP GH N+L+L GG+ GWELALVT +N+ N R K+ GGF
Sbjct: 402 FSLAIYPP-GHETSAPSNSLSLIEAGGS-GWELALVTPQNNNNNNNNPRPVIATKLGGGF 459
Query: 52 DKLLLDSLYEDDNARRQHQLQMAGYGHGGVPV------ENPFDHYNQQHDPFAMSSNIAP 105
D LLLDSLYEDD ARRQ QL AGYG G + NP + + Q DPFAMS+N+AP
Sbjct: 460 DNLLLDSLYEDDTARRQIQLTNAGYGFGATAIPGALASSNP-NPFGVQQDPFAMSNNMAP 518
Query: 106 PTNV 109
PTNV
Sbjct: 519 PTNV 522
>AT5G35200.1 | Symbols: | ENTH/ANTH/VHS superfamily protein |
chr5:13462463-13465581 REVERSE LENGTH=544
Length = 544
Score = 80.9 bits (198), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Query: 1 MALAILPPDGHNPNNLALSSIGGTTGWELALVTAPSNHTNQAPDRKMAGGFDKLLLDSLY 60
+ALAI+P P++ + G +TGWELALVTAPS++ A D K+AGG DKL LDSLY
Sbjct: 379 LALAIVPVSVEQPHSTTDFTNGNSTGWELALVTAPSSNEGAAADSKLAGGLDKLTLDSLY 438
Query: 61 EDDNARRQHQLQMAGYGHGGVPVE-NPFDHYNQQHDPFAMSSNIAPPTNVQLA 112
ED A R Q Q Y P E NP + + H PF S+ +A P Q+A
Sbjct: 439 ED--AIRVSQQQNRSYN----PWEQNPVHNGHMMHQPFYASNGVAAPQPFQMA 485
>AT1G14910.1 | Symbols: | ENTH/ANTH/VHS superfamily protein |
chr1:5139928-5143571 REVERSE LENGTH=692
Length = 692
Score = 68.6 bits (166), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 10/85 (11%)
Query: 25 TGWELALVTAPSNHTNQAPDRKMAGGFDKLLLDSLYEDDNARRQHQLQMAGYGHGGVPVE 84
+GWELALVT PSN + A +R++AGG D L L+SLY+D R Q Y GVP
Sbjct: 425 SGWELALVTTPSNDISAATERQLAGGLDTLTLNSLYDDGALRAAQQ---PAY---GVPAS 478
Query: 85 NPFDHYNQQHDPFAMSSNIAPPTNV 109
NPF + D FA S +++PP+ V
Sbjct: 479 NPF----EVQDLFAFSDSVSPPSAV 499
>AT2G01600.1 | Symbols: | ENTH/ANTH/VHS superfamily protein |
chr2:268975-272356 FORWARD LENGTH=571
Length = 571
Score = 68.6 bits (166), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 61/117 (52%), Gaps = 23/117 (19%)
Query: 1 MALAIL-----PPDGH--NPNNLALSSIGGTTGWELALVTAPSNHTNQAPDRKMAGGFDK 53
+ALAI+ PP H PNN TGWELALVTAPS+ + + +RK+AGG D
Sbjct: 398 LALAIVSTDADPPTPHFGQPNNY------DPTGWELALVTAPSSDISASTERKLAGGLDT 451
Query: 54 LLLDSLYEDDNARRQHQLQMAGYGHGGVPVENPFDHYNQQHDPFAMSSNIAPPTNVQ 110
L L SLY DD A Q + G P NPF HDPFA S+ APP Q
Sbjct: 452 LTLSSLY-DDGAYIASQRPVY-----GAPAPNPF----ASHDPFASSNGTAPPPQQQ 498
>AT2G25430.1 | Symbols: | epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related | chr2:10822716-10824677 FORWARD
LENGTH=653
Length = 653
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 61/145 (42%), Gaps = 32/145 (22%)
Query: 1 MALAILP-PDGHNPNNLALSSIGGTTGW------------ELALVTAPSNHTNQAPDRKM 47
ALA+ P G+N A SS G T+ W ELALV SN Q +
Sbjct: 454 FALALFAGPPGNNGKWEAFSSNGVTSAWQNPAAEPGKADWELALVETTSNLEKQTA--AL 511
Query: 48 AGGFDKLLLDSLYEDDNARRQH--QLQMAGYGHGGVPVENPFDHYNQ------------- 92
GGFD LLL+ +Y D RQH Q+ G V + P NQ
Sbjct: 512 GGGFDNLLLNGMY-DQGMVRQHVSTSQLTGGSASSVALPLPGKTNNQVLALPAPDGTVEK 570
Query: 93 -QHDPFAMSSNIAPPTNVQLALLAQ 116
DPFA S I PP+ VQ+A + +
Sbjct: 571 VNQDPFAASLTIPPPSYVQMAEMEK 595
>AT4G32285.2 | Symbols: | ENTH/ANTH/VHS superfamily protein |
chr4:15586003-15587910 FORWARD LENGTH=635
Length = 635
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 43/106 (40%), Gaps = 19/106 (17%)
Query: 23 GTTGWELALVTAPSNHTNQAPDRKMAGGFDKLLLDSLYEDDNARRQHQLQMAGYGHGGVP 82
G WELALV SN +Q M GG D LLL+ +Y D A RQH G
Sbjct: 470 GKADWELALVETASNLEHQKA--AMGGGLDPLLLNGMY-DQGAVRQHVSTSELTGGSSSS 526
Query: 83 VENPFDHYNQQH----------------DPFAMSSNIAPPTNVQLA 112
V P H DPFA S I PP+ VQ+A
Sbjct: 527 VALPLPGKVNSHILALPAPDGTVQKVNQDPFAASLTIPPPSYVQMA 572
>AT4G32285.1 | Symbols: | ENTH/ANTH/VHS superfamily protein |
chr4:15586003-15587910 FORWARD LENGTH=635
Length = 635
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 43/106 (40%), Gaps = 19/106 (17%)
Query: 23 GTTGWELALVTAPSNHTNQAPDRKMAGGFDKLLLDSLYEDDNARRQHQLQMAGYGHGGVP 82
G WELALV SN +Q M GG D LLL+ +Y D A RQH G
Sbjct: 470 GKADWELALVETASNLEHQKA--AMGGGLDPLLLNGMY-DQGAVRQHVSTSELTGGSSSS 526
Query: 83 VENPFDHYNQQH----------------DPFAMSSNIAPPTNVQLA 112
V P H DPFA S I PP+ VQ+A
Sbjct: 527 VALPLPGKVNSHILALPAPDGTVQKVNQDPFAASLTIPPPSYVQMA 572