Miyakogusa Predicted Gene

Lj6g3v1318540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1318540.1 tr|G7IGA8|G7IGA8_MEDTR CLEC16A-like protein
OS=Medicago truncatula GN=MTR_2g038210 PE=4
SV=1,68.33,0.000000000000008,
,NODE_30211_length_668_cov_43.576347.path2.1
         (73 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G28430.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    75   1e-14

>AT3G28430.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: mitochondrion;
           EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6
           growth stages; CONTAINS InterPro DOMAIN/s: Protein of
           unknown function FPL (InterPro:IPR019155); Has 243 Blast
           hits to 233 proteins in 101 species: Archae - 0;
           Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
           Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
           | chr3:10657441-10662404 REVERSE LENGTH=837
          Length = 837

 Score = 74.7 bits (182), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 34/50 (68%), Positives = 39/50 (78%)

Query: 1   MKRKGLVDGRWTLAFRDEESCKSALSMIAEEINFLSDEVHRRLRPLLNLE 50
           +K KGLVDGRW LAFRD+ESC SA SM+A EI+    EV RRLRPL +LE
Sbjct: 781 LKSKGLVDGRWILAFRDDESCHSAYSMVAGEIDLQCSEVERRLRPLFDLE 830