Miyakogusa Predicted Gene

Lj6g3v1315110.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1315110.1 tr|G7IIC1|G7IIC1_MEDTR Oligosaccharyltransferase
complex subunit OSTC OS=Medicago truncatula GN=MTR_,86.36,0,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; OST3_OST6,Oligosaccharyl
transferase complex, subun,CUFF.59333.1
         (177 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G29870.1 | Symbols:  | Oligosaccharyltransferase complex/magn...   160   5e-40
AT2G19340.2 | Symbols:  | Oligosaccharyltransferase complex/magn...   154   2e-38
AT2G19340.1 | Symbols:  | Oligosaccharyltransferase complex/magn...   134   3e-32

>AT4G29870.1 | Symbols:  | Oligosaccharyltransferase
           complex/magnesium transporter family protein |
           chr4:14606012-14606530 FORWARD LENGTH=172
          Length = 172

 Score =  160 bits (404), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 86/152 (56%), Positives = 98/152 (64%)

Query: 26  IDPIFHXXXXXXXXXXXXXXXXXXXXXXXXXXANLVFAFVLLTYFMVVSGIVYDIIVEPP 85
           IDPIFH                             VF+ +LLTYF+VVSG VYD+IVEPP
Sbjct: 21  IDPIFHILRIIPFSFLRPPRLRLKLPSFTLPSPMTVFSLILLTYFLVVSGFVYDVIVEPP 80

Query: 86  GIGSTQDPYTGAVKPVVFMSGRVNGQYIIEGLSSGFMFXXXXXXXXXXXXXXXXXXXXSV 145
           GIGSTQDP TG+V+PVVFMSGRVNGQYIIEGLSSGFMF                    SV
Sbjct: 81  GIGSTQDPITGSVRPVVFMSGRVNGQYIIEGLSSGFMFVLGGIGIIMLDLALDKNRAKSV 140

Query: 146 KVSYASAGITSVLLAYVMSMLFIRIKIPAYLR 177
           K SYA+AG++S+++AYVMSMLFIRIKIP YLR
Sbjct: 141 KASYATAGVSSIVIAYVMSMLFIRIKIPGYLR 172


>AT2G19340.2 | Symbols:  | Oligosaccharyltransferase
           complex/magnesium transporter family protein |
           chr2:8375274-8375795 REVERSE LENGTH=173
          Length = 173

 Score =  154 bits (390), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 78/116 (67%), Positives = 89/116 (76%)

Query: 61  VFAFVLLTYFMVVSGIVYDIIVEPPGIGSTQDPYTGAVKPVVFMSGRVNGQYIIEGLSSG 120
           V+A +LLTYF+VVSG VYD+IVEPPGIGSTQDP TG ++PVVFMSGRVNGQYIIEGLSSG
Sbjct: 57  VYALILLTYFLVVSGFVYDVIVEPPGIGSTQDPTTGTIRPVVFMSGRVNGQYIIEGLSSG 116

Query: 121 FMFXXXXXXXXXXXXXXXXXXXXSVKVSYASAGITSVLLAYVMSMLFIRIKIPAYL 176
           FMF                    SVK SYA AG++S+++AYVMSMLFIRIKIP YL
Sbjct: 117 FMFVLGGIGIVMLDLALDKNKAKSVKASYAVAGVSSIVIAYVMSMLFIRIKIPGYL 172


>AT2G19340.1 | Symbols:  | Oligosaccharyltransferase
           complex/magnesium transporter family protein |
           chr2:8374313-8375795 REVERSE LENGTH=200
          Length = 200

 Score =  134 bits (337), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 67/104 (64%), Positives = 78/104 (75%)

Query: 61  VFAFVLLTYFMVVSGIVYDIIVEPPGIGSTQDPYTGAVKPVVFMSGRVNGQYIIEGLSSG 120
           V+A +LLTYF+VVSG VYD+IVEPPGIGSTQDP TG ++PVVFMSGRVNGQYIIEGLSSG
Sbjct: 57  VYALILLTYFLVVSGFVYDVIVEPPGIGSTQDPTTGTIRPVVFMSGRVNGQYIIEGLSSG 116

Query: 121 FMFXXXXXXXXXXXXXXXXXXXXSVKVSYASAGITSVLLAYVMS 164
           FMF                    SVK SYA AG++S+++AYVMS
Sbjct: 117 FMFVLGGIGIVMLDLALDKNKAKSVKASYAVAGVSSIVIAYVMS 160