Miyakogusa Predicted Gene

Lj6g3v1270770.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1270770.1 Non Chatacterized Hit- tr|D7MM77|D7MM77_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,37.28,2e-18,GATA_ZN_FINGER_1,Zinc finger, GATA-type;
TRANSCRIPTION FACTOR GATA (GATA BINDING FACTOR),NULL;
Gluco,CUFF.59306.1
         (315 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G26150.1 | Symbols: CGA1, GATA22, GNL | cytokinin-responsive ...    75   6e-14
AT5G56860.1 | Symbols: GNC, GATA21 | GATA type zinc finger trans...    74   1e-13
AT5G49300.1 | Symbols: GATA16 | GATA transcription factor 16 | c...    68   1e-11
AT5G26930.1 | Symbols: GATA23 | GATA transcription factor 23 | c...    65   9e-11
AT4G36620.1 | Symbols: GATA19 | GATA transcription factor 19 | c...    63   3e-10
AT3G16870.1 | Symbols: GATA17 | GATA transcription factor 17 | c...    62   4e-10
AT3G06740.1 | Symbols: GATA15 | GATA transcription factor 15 | c...    62   4e-10
AT3G50870.1 | Symbols: MNP, HAN, GATA18 | GATA type zinc finger ...    62   5e-10
AT4G16141.1 | Symbols:  | GATA type zinc finger transcription fa...    62   6e-10
AT2G18380.1 | Symbols: GATA20 | GATA transcription factor 20 | c...    61   8e-10
AT1G08000.2 | Symbols: GATA10 | GATA transcription factor 10 | c...    60   1e-09
AT1G08000.1 | Symbols: GATA10 | GATA transcription factor 10 | c...    60   1e-09
AT1G08010.2 | Symbols: GATA11 | GATA transcription factor 11 | c...    59   4e-09
AT1G08010.1 | Symbols: GATA11 | GATA transcription factor 11 | c...    59   4e-09
AT4G32890.1 | Symbols: GATA9 | GATA transcription factor 9 | chr...    54   1e-07
AT5G25830.1 | Symbols: GATA12 | GATA transcription factor 12 | c...    54   1e-07
AT3G54810.1 | Symbols: BME3-ZF, BME3, GATA8 | Plant-specific GAT...    54   1e-07
AT3G54810.2 | Symbols: BME3-ZF, BME3, GATA8 | Plant-specific GAT...    54   1e-07
AT2G45050.1 | Symbols: GATA2 | GATA transcription factor 2 | chr...    54   1e-07
AT3G45170.1 | Symbols: GATA14 | GATA transcription factor 14 | c...    53   3e-07
AT4G34680.2 | Symbols: GATA3 | GATA transcription factor 3 | chr...    53   3e-07
AT4G34680.1 | Symbols: GATA3 | GATA transcription factor 3 | chr...    53   3e-07
AT3G24050.1 | Symbols: GATA1 | GATA transcription factor 1 | chr...    52   5e-07
AT3G60530.1 | Symbols: GATA4 | GATA transcription factor 4 | chr...    52   5e-07
AT5G66320.2 | Symbols: GATA5 | GATA transcription factor 5 | chr...    51   8e-07
AT5G66320.1 | Symbols: GATA5 | GATA transcription factor 5 | chr...    51   8e-07
AT3G51080.1 | Symbols: GATA6 | GATA transcription factor 6 | chr...    51   1e-06
AT2G28340.1 | Symbols: GATA13 | GATA transcription factor 13 | c...    51   1e-06
AT4G36240.1 | Symbols: GATA7 | GATA transcription factor 7 | chr...    50   2e-06
AT3G20750.1 | Symbols: GATA29 | GATA transcription factor 29 | c...    50   2e-06

>AT4G26150.1 | Symbols: CGA1, GATA22, GNL | cytokinin-responsive
           gata factor 1 | chr4:13253210-13254659 FORWARD
           LENGTH=352
          Length = 352

 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 22/103 (21%)

Query: 118 SSAKWMPLKIRM--KRRLMVSDQTSSDHAIAGIQSTDEHKQENQKLPLPQHLRSTDXXXX 175
           +S KW+  K+R+  K++ +++   SS       QS++    E Q                
Sbjct: 146 NSLKWISSKVRLMKKKKAIITTSDSSKQHTNNDQSSNLSNSERQN--------------- 190

Query: 176 XXXXXXXXXXXAVRVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
                       +R+C+DCNTTKTPLWR GPRGPK+LCNACGI
Sbjct: 191 -----GYNNDCVIRICSDCNTTKTPLWRSGPRGPKSLCNACGI 228


>AT5G56860.1 | Symbols: GNC, GATA21 | GATA type zinc finger
           transcription factor family protein |
           chr5:22989630-22991351 REVERSE LENGTH=398
          Length = 398

 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 27/32 (84%), Positives = 30/32 (93%)

Query: 187 AVRVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
            +RVC+DCNTTKTPLWR GPRGPK+LCNACGI
Sbjct: 228 VIRVCSDCNTTKTPLWRSGPRGPKSLCNACGI 259


>AT5G49300.1 | Symbols: GATA16 | GATA transcription factor 16 |
           chr5:19984849-19985475 REVERSE LENGTH=139
          Length = 139

 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 61/136 (44%), Gaps = 47/136 (34%)

Query: 189 RVCADCNTTKTPLWRGGPRGPKTLCNACGIXXXXXXXXXXXXXXXXXXXXXXXXXXDQKP 248
           + CADC T+KTPLWRGGP GPK+LCNACGI                           ++ 
Sbjct: 36  KTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKK----------------------RRG 73

Query: 249 HVKRNHKLQIXXXXXXXXXXXXPNLGGGGTKKLGSEELTISL------SKSLALPQ---- 298
             + N KL+                 GGG +K G E L  SL       +S    Q    
Sbjct: 74  GTEDNKKLKKSSS-------------GGGNRKFG-ESLKQSLMDLGIRKRSTVEKQRQKL 119

Query: 299 -DEKDAAILLMALSHG 313
            +E+ AA+LLMALS+G
Sbjct: 120 GEEEQAAVLLMALSYG 135


>AT5G26930.1 | Symbols: GATA23 | GATA transcription factor 23 |
           chr5:9479592-9480061 FORWARD LENGTH=120
          Length = 120

 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 23/31 (74%), Positives = 28/31 (90%)

Query: 188 VRVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
           +R C++C TTKTP+WRGGP GPK+LCNACGI
Sbjct: 25  IRCCSECKTTKTPMWRGGPTGPKSLCNACGI 55


>AT4G36620.1 | Symbols: GATA19 | GATA transcription factor 19 |
           chr4:17268906-17269662 REVERSE LENGTH=211
          Length = 211

 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 24/31 (77%), Positives = 27/31 (87%)

Query: 188 VRVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
            R CA+C+TT TPLWR GPRGPK+LCNACGI
Sbjct: 74  ARRCANCDTTSTPLWRNGPRGPKSLCNACGI 104


>AT3G16870.1 | Symbols: GATA17 | GATA transcription factor 17 |
           chr3:5763752-5764576 REVERSE LENGTH=190
          Length = 190

 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 23/30 (76%), Positives = 25/30 (83%)

Query: 189 RVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
           R C DC T +TPLWRGGP GPK+LCNACGI
Sbjct: 42  RTCVDCGTIRTPLWRGGPAGPKSLCNACGI 71


>AT3G06740.1 | Symbols: GATA15 | GATA transcription factor 15 |
           chr3:2126658-2127265 FORWARD LENGTH=149
          Length = 149

 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 23/28 (82%), Positives = 25/28 (89%)

Query: 191 CADCNTTKTPLWRGGPRGPKTLCNACGI 218
           CA C T+KTPLWRGGP GPK+LCNACGI
Sbjct: 43  CAICGTSKTPLWRGGPAGPKSLCNACGI 70


>AT3G50870.1 | Symbols: MNP, HAN, GATA18 | GATA type zinc finger
           transcription factor family protein |
           chr3:18911112-18912369 FORWARD LENGTH=295
          Length = 295

 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 24/31 (77%), Positives = 27/31 (87%)

Query: 188 VRVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
            R CA+C+TT TPLWR GPRGPK+LCNACGI
Sbjct: 151 ARRCANCDTTSTPLWRNGPRGPKSLCNACGI 181


>AT4G16141.1 | Symbols:  | GATA type zinc finger transcription
           factor family protein | chr4:9131872-9132893 REVERSE
           LENGTH=197
          Length = 197

 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 22/30 (73%), Positives = 26/30 (86%)

Query: 189 RVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
           + C DC T++TPLWRGGP GPK+LCNACGI
Sbjct: 37  KTCVDCGTSRTPLWRGGPAGPKSLCNACGI 66


>AT2G18380.1 | Symbols: GATA20 | GATA transcription factor 20 |
           chr2:7982868-7984017 REVERSE LENGTH=208
          Length = 208

 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 23/30 (76%), Positives = 26/30 (86%)

Query: 189 RVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
           R CA C+TT TPLWR GP+GPK+LCNACGI
Sbjct: 92  RRCASCDTTSTPLWRNGPKGPKSLCNACGI 121


>AT1G08000.2 | Symbols: GATA10 | GATA transcription factor 10 |
           chr1:2483460-2484564 REVERSE LENGTH=308
          Length = 308

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 7/80 (8%)

Query: 139 TSSDHAIAGIQSTDEHKQENQKLPLPQHLRSTDXXXXXXXXXXXXXXXAVRVCADCNTTK 198
           T  +    G  S+++H ++ +K+ L  H  S+                 VR+C  C T  
Sbjct: 175 TPGESVTEGYYSSEQHAKKKRKIHLITHTESS-------TLESSKSDGIVRICTHCETIT 227

Query: 199 TPLWRGGPRGPKTLCNACGI 218
           TP WR GP GPKTLCNACG+
Sbjct: 228 TPQWRQGPSGPKTLCNACGV 247


>AT1G08000.1 | Symbols: GATA10 | GATA transcription factor 10 |
           chr1:2483460-2484564 REVERSE LENGTH=308
          Length = 308

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 7/80 (8%)

Query: 139 TSSDHAIAGIQSTDEHKQENQKLPLPQHLRSTDXXXXXXXXXXXXXXXAVRVCADCNTTK 198
           T  +    G  S+++H ++ +K+ L  H  S+                 VR+C  C T  
Sbjct: 175 TPGESVTEGYYSSEQHAKKKRKIHLITHTESS-------TLESSKSDGIVRICTHCETIT 227

Query: 199 TPLWRGGPRGPKTLCNACGI 218
           TP WR GP GPKTLCNACG+
Sbjct: 228 TPQWRQGPSGPKTLCNACGV 247


>AT1G08010.2 | Symbols: GATA11 | GATA transcription factor 11 |
           chr1:2486202-2487402 REVERSE LENGTH=303
          Length = 303

 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 23/31 (74%), Positives = 24/31 (77%)

Query: 188 VRVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
           VR C  C TTKTP WR GP GPKTLCNACG+
Sbjct: 219 VRKCTHCETTKTPQWREGPSGPKTLCNACGV 249


>AT1G08010.1 | Symbols: GATA11 | GATA transcription factor 11 |
           chr1:2486202-2487402 REVERSE LENGTH=303
          Length = 303

 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 23/31 (74%), Positives = 24/31 (77%)

Query: 188 VRVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
           VR C  C TTKTP WR GP GPKTLCNACG+
Sbjct: 219 VRKCTHCETTKTPQWREGPSGPKTLCNACGV 249


>AT4G32890.1 | Symbols: GATA9 | GATA transcription factor 9 |
           chr4:15875598-15876615 FORWARD LENGTH=308
          Length = 308

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/30 (70%), Positives = 22/30 (73%)

Query: 189 RVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
           R C  C T KTP WR GP GPKTLCNACG+
Sbjct: 197 RRCLHCATEKTPQWRTGPMGPKTLCNACGV 226


>AT5G25830.1 | Symbols: GATA12 | GATA transcription factor 12 |
           chr5:9004398-9005502 REVERSE LENGTH=331
          Length = 331

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/30 (70%), Positives = 22/30 (73%)

Query: 189 RVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
           R C  C T KTP WR GP GPKTLCNACG+
Sbjct: 219 RRCLHCATDKTPQWRTGPMGPKTLCNACGV 248


>AT3G54810.1 | Symbols: BME3-ZF, BME3, GATA8 | Plant-specific
           GATA-type zinc finger transcription factor family
           protein | chr3:20296957-20298236 FORWARD LENGTH=322
          Length = 322

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/31 (67%), Positives = 23/31 (74%)

Query: 188 VRVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
           +R C  C  TKTP WR GP GPKTLCNACG+
Sbjct: 228 LRKCMHCEVTKTPQWRLGPMGPKTLCNACGV 258


>AT3G54810.2 | Symbols: BME3-ZF, BME3, GATA8 | Plant-specific
           GATA-type zinc finger transcription factor family
           protein | chr3:20296957-20298236 FORWARD LENGTH=322
          Length = 322

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/31 (67%), Positives = 23/31 (74%)

Query: 188 VRVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
           +R C  C  TKTP WR GP GPKTLCNACG+
Sbjct: 228 LRKCMHCEVTKTPQWRLGPMGPKTLCNACGV 258


>AT2G45050.1 | Symbols: GATA2 | GATA transcription factor 2 |
           chr2:18582958-18583845 FORWARD LENGTH=264
          Length = 264

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 20/32 (62%), Positives = 23/32 (71%)

Query: 187 AVRVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
            +R C  C + KTP WR GP GPKTLCNACG+
Sbjct: 177 GMRRCTHCASEKTPQWRTGPLGPKTLCNACGV 208


>AT3G45170.1 | Symbols: GATA14 | GATA transcription factor 14 |
           chr3:16537538-16538232 FORWARD LENGTH=204
          Length = 204

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 20/28 (71%), Positives = 22/28 (78%)

Query: 191 CADCNTTKTPLWRGGPRGPKTLCNACGI 218
           C+ C T KTPLWR GPRG  TLCNACG+
Sbjct: 117 CSHCGTRKTPLWREGPRGAGTLCNACGM 144


>AT4G34680.2 | Symbols: GATA3 | GATA transcription factor 3 |
           chr4:16553700-16554610 FORWARD LENGTH=269
          Length = 269

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 20/30 (66%), Positives = 22/30 (73%)

Query: 189 RVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
           R C+ C T  TP WR GP GPKTLCNACG+
Sbjct: 180 RRCSHCGTNNTPQWRTGPVGPKTLCNACGV 209


>AT4G34680.1 | Symbols: GATA3 | GATA transcription factor 3 |
           chr4:16553700-16554610 FORWARD LENGTH=269
          Length = 269

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 20/30 (66%), Positives = 22/30 (73%)

Query: 189 RVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
           R C+ C T  TP WR GP GPKTLCNACG+
Sbjct: 180 RRCSHCGTNNTPQWRTGPVGPKTLCNACGV 209


>AT3G24050.1 | Symbols: GATA1 | GATA transcription factor 1 |
           chr3:8686060-8687462 FORWARD LENGTH=274
          Length = 274

 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 20/30 (66%), Positives = 21/30 (70%)

Query: 189 RVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
           R C  C   KTP WR GP GPKTLCNACG+
Sbjct: 194 RKCQHCGAEKTPQWRAGPAGPKTLCNACGV 223


>AT3G60530.1 | Symbols: GATA4 | GATA transcription factor 4 |
           chr3:22373348-22374147 FORWARD LENGTH=240
          Length = 240

 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 20/32 (62%), Positives = 22/32 (68%)

Query: 187 AVRVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
             R C  C + KTP WR GP GPKTLCNACG+
Sbjct: 156 GARRCTHCASEKTPQWRTGPLGPKTLCNACGV 187


>AT5G66320.2 | Symbols: GATA5 | GATA transcription factor 5 |
           chr5:26496208-26497309 REVERSE LENGTH=339
          Length = 339

 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 19/30 (63%), Positives = 21/30 (70%)

Query: 189 RVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
           R C+ C   KTP WR GP G KTLCNACG+
Sbjct: 249 RKCSHCGVQKTPQWRAGPMGAKTLCNACGV 278


>AT5G66320.1 | Symbols: GATA5 | GATA transcription factor 5 |
           chr5:26496208-26497309 REVERSE LENGTH=339
          Length = 339

 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 19/30 (63%), Positives = 21/30 (70%)

Query: 189 RVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
           R C+ C   KTP WR GP G KTLCNACG+
Sbjct: 249 RKCSHCGVQKTPQWRAGPMGAKTLCNACGV 278


>AT3G51080.1 | Symbols: GATA6 | GATA transcription factor 6 |
           chr3:18973639-18974668 FORWARD LENGTH=312
          Length = 312

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/30 (63%), Positives = 20/30 (66%)

Query: 189 RVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
           R C  C   KTP WR GP G KTLCNACG+
Sbjct: 221 RQCGHCGVQKTPQWRAGPLGAKTLCNACGV 250


>AT2G28340.1 | Symbols: GATA13 | GATA transcription factor 13 |
           chr2:12103672-12106172 FORWARD LENGTH=291
          Length = 291

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/28 (71%), Positives = 20/28 (71%)

Query: 191 CADCNTTKTPLWRGGPRGPKTLCNACGI 218
           C  C TT TP WR GP G KTLCNACGI
Sbjct: 193 CTHCETTTTPQWREGPNGRKTLCNACGI 220


>AT4G36240.1 | Symbols: GATA7 | GATA transcription factor 7 |
           chr4:17147376-17148211 REVERSE LENGTH=238
          Length = 238

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/30 (63%), Positives = 21/30 (70%)

Query: 189 RVCADCNTTKTPLWRGGPRGPKTLCNACGI 218
           R C+ C   KTP WR GP G KTLCNACG+
Sbjct: 164 RCCSHCGVQKTPQWRMGPLGAKTLCNACGV 193


>AT3G20750.1 | Symbols: GATA29 | GATA transcription factor 29 |
           chr3:7255016-7256140 FORWARD LENGTH=208
          Length = 208

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 18/26 (69%), Positives = 21/26 (80%)

Query: 193 DCNTTKTPLWRGGPRGPKTLCNACGI 218
           +CN   TP+WR GP GPK+LCNACGI
Sbjct: 163 NCNALNTPMWRRGPLGPKSLCNACGI 188