Miyakogusa Predicted Gene

Lj6g3v1269750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1269750.1 CUFF.59302.1
         (179 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G24660.1 | Symbols: TMKL1 | transmembrane kinase-like 1 | chr...    80   1e-15

>AT3G24660.1 | Symbols: TMKL1 | transmembrane kinase-like 1 |
           chr3:9003641-9005751 FORWARD LENGTH=674
          Length = 674

 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/58 (77%), Positives = 54/58 (93%)

Query: 46  KIRASLQGNAENLVLSSWNSSIPLCQWRGLKWVFSNGSPLSCSDLSSPQWTNLSLHKN 103
           KI++SLQGN+E+L+LSSWNSS+P+CQWRG+KWVFSNGSPL CSDLSSPQWTN SL  +
Sbjct: 39  KIKSSLQGNSESLLLSSWNSSVPVCQWRGVKWVFSNGSPLQCSDLSSPQWTNTSLFND 96