Miyakogusa Predicted Gene

Lj6g3v1211980.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1211980.1 Non Chatacterized Hit- tr|I1L1L3|I1L1L3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19153
PE,83.91,0,FAD/NAD(P)-binding domain,NULL; seg,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; carotene-,CUFF.59261.1
         (510 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G57030.1 | Symbols: LUT2 | Lycopene beta/epsilon cyclase prot...   667   0.0  
AT3G10230.1 | Symbols: LYC | lycopene cyclase | chr3:3164340-316...   269   4e-72
AT3G10230.2 | Symbols: LYC | lycopene cyclase | chr3:3164340-316...   234   2e-61

>AT5G57030.1 | Symbols: LUT2 | Lycopene beta/epsilon cyclase protein
           | chr5:23077398-23079818 FORWARD LENGTH=524
          Length = 524

 Score =  667 bits (1720), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/510 (65%), Positives = 377/510 (73%), Gaps = 13/510 (2%)

Query: 1   MECVGARNLAAMAFCVSPSXXXXXXXXXXXXXXVSSSGHAVRWRSHCLKVXXXXXXXXXX 60
           MECVGARN AAMA    PS                   ++ R     L            
Sbjct: 1   MECVGARNFAAMAVSTFPSWSCRRKFPVVKR-------YSYRNIRFGLCSVRASGGGSSG 53

Query: 61  XXXCVVTKEEFADEEDYVKAGGSELVFVXXXXXXXXXXXXXLADKLQPXXXXXXXXXXXX 120
              CV  +E+FADEED+VKAGGSE++FV             L DKL P            
Sbjct: 54  SESCVAVREDFADEEDFVKAGGSEILFVQMQQNKDMDEQSKLVDKLPPISIGDGALDLVV 113

Query: 121 XXXXPAGLALAAECGMLGLKVGLIGPDLPFTNNYGVWEDEFKGLGLEGCIEHVWKDTIVY 180
               PAGLALAAE   LGLKVGLIGPDLPFTNNYGVWEDEF  LGL+ CIEHVW++TIVY
Sbjct: 114 IGCGPAGLALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFNDLGLQKCIEHVWRETIVY 173

Query: 181 LDNKDPILIGRSYGRVSRHLLHEELLKRCVESGVSYLSSRVERIVEASNGNSHVVCEYDI 240
           LD+  PI IGR+YGRVSR LLHEELL+RCVESGVSYLSS+V+ I EAS+G   V C+ + 
Sbjct: 174 LDDDKPITIGRAYGRVSRRLLHEELLRRCVESGVSYLSSKVDSITEASDGLRLVACDDNN 233

Query: 241 KVPCRLATVASGAASGKLLQYEVGGPKVSVQTAYGIEVEVENNPYDPNLMVFMDYRDYMK 300
            +PCRLATVASGAASGKLLQYEVGGP+V VQTAYG+EVEVEN+PYDP+ MVFMDYRDY  
Sbjct: 234 VIPCRLATVASGAASGKLLQYEVGGPRVCVQTAYGVEVEVENSPYDPDQMVFMDYRDYTN 293

Query: 301 QNVQCLEASYPTFLYAMPMSSTKVFFEETCLASEDAMPFDLLKKKLFSRLNTMGIRITKT 360
           + V+ LEA YPTFLYAMPM+ +++FFEETCLAS+D MPFDLLK KL  RL+T+GIRI KT
Sbjct: 294 EKVRSLEAEYPTFLYAMPMTKSRLFFEETCLASKDVMPFDLLKTKLMLRLDTLGIRILKT 353

Query: 361 YEEEWSYIPVGGSLPNTDQKNLAFGAAACMVHPATGYSVVRSLSEAPKYASIIATILKES 420
           YEEEWSYIPVGGSLPNT+QKNLAFGAAA MVHPATGYSVVRSLSEAPKYAS+IA IL+E 
Sbjct: 354 YEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIAEILREE 413

Query: 421 HARGIVTHNRTKENLSMQAWNGLWPQEKKRQRAFFLFGLALILQLDIEGIRTFFRTFFCL 480
                 T  +   N+S QAW+ LWP E+KRQRAFFLFGLALI+Q D EGIR+FFRTFF L
Sbjct: 414 ------TTKQINSNISRQAWDTLWPPERKRQRAFFLFGLALIVQFDTEGIRSFFRTFFRL 467

Query: 481 PTWMWQGFLGSSLSSRDLALFALYMFIIAP 510
           P WMWQGFLGS+L+S DL LFALYMF+I+P
Sbjct: 468 PKWMWQGFLGSTLTSGDLVLFALYMFVISP 497


>AT3G10230.1 | Symbols: LYC | lycopene cyclase |
           chr3:3164340-3165845 REVERSE LENGTH=501
          Length = 501

 Score =  269 bits (687), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 149/388 (38%), Positives = 220/388 (56%), Gaps = 15/388 (3%)

Query: 125 PAGLALAAECGMLGLKVGLI--GPDLPFTNNYGVWEDEFKGLGLEGCIEHVWKDTIVYLD 182
           PAGLA+A +    GL V  I   P L + NNYGVW DEF+ + L  C++  W   +VY+D
Sbjct: 92  PAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYVD 151

Query: 183 NKDPILIGRSYGRVSRHLLHEELLKRCVESGVSYLSSRVERIVEASNGNSHVVCEYDIKV 242
                 + R YGRV+R  L  ++L++C+ +GV +  S+V  +V     NS VVC   +K+
Sbjct: 152 EGVKKDLSRPYGRVNRKQLKSKMLQKCITNGVKFHQSKVTNVVH-EEANSTVVCSDGVKI 210

Query: 243 PCRLATVASGAASGKLLQYEVGGP-KVSVQTAYGIEVEVENNPYDPNLMVFMDYRDYMKQ 301
              +   A+G  S  L+QY+   P     Q AYGI  EV+ +P+D + MVFMD+RD    
Sbjct: 211 QASVVLDATGF-SRCLVQYD--KPYNPGYQVAYGIVAEVDGHPFDVDKMVFMDWRDKHLD 267

Query: 302 NVQCLE---ASYPTFLYAMPMSSTKVFFEETCLASEDAMPFDLLKKKLFSRLNTMGIRIT 358
           +   L+   +  PTFLYAMP SS ++F EET L +   +  + +++++ +RL  +GI + 
Sbjct: 268 SYPELKERNSKIPTFLYAMPFSSNRIFLEETSLVARPGLRMEDIQERMAARLKHLGINVK 327

Query: 359 KTYEEEWSYIPVGGSLPNTDQKNLAFGAAACMVHPATGYSVVRSLSEAPKYASIIATILK 418
           +  E+E   IP+GG LP   Q+ +  G  A MVHP+TGY V R+L+ AP  A+ I   L 
Sbjct: 328 RIEEDERCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRYLG 387

Query: 419 ESHARGIVTHNRTKENLSMQAWNGLWPQEKKRQRAFFLFGLALILQLDIEGIRTFFRTFF 478
              +  +       + LS + W  LWP E++RQR FF FG+ ++L+LD++  R FF  FF
Sbjct: 388 SPSSNSL-----RGDQLSAEVWRDLWPIERRRQREFFCFGMDILLKLDLDATRRFFDAFF 442

Query: 479 CLPTWMWQGFLGSSLSSRDLALFALYMF 506
            L    W GFL S L   +L +F L +F
Sbjct: 443 DLQPHYWHGFLSSRLFLPELLVFGLSLF 470


>AT3G10230.2 | Symbols: LYC | lycopene cyclase |
           chr3:3164340-3165449 REVERSE LENGTH=369
          Length = 369

 Score =  234 bits (596), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 128/347 (36%), Positives = 195/347 (56%), Gaps = 13/347 (3%)

Query: 164 LGLEGCIEHVWKDTIVYLDNKDPILIGRSYGRVSRHLLHEELLKRCVESGVSYLSSRVER 223
           + L  C++  W   +VY+D      + R YGRV+R  L  ++L++C+ +GV +  S+V  
Sbjct: 1   MDLLDCLDTTWSGAVVYVDEGVKKDLSRPYGRVNRKQLKSKMLQKCITNGVKFHQSKVTN 60

Query: 224 IVEASNGNSHVVCEYDIKVPCRLATVASGAASGKLLQYEVGGP-KVSVQTAYGIEVEVEN 282
           +V     NS VVC   +K+   +   A+G  S  L+QY+   P     Q AYGI  EV+ 
Sbjct: 61  VVH-EEANSTVVCSDGVKIQASVVLDATGF-SRCLVQYD--KPYNPGYQVAYGIVAEVDG 116

Query: 283 NPYDPNLMVFMDYRDYMKQNVQCLE---ASYPTFLYAMPMSSTKVFFEETCLASEDAMPF 339
           +P+D + MVFMD+RD    +   L+   +  PTFLYAMP SS ++F EET L +   +  
Sbjct: 117 HPFDVDKMVFMDWRDKHLDSYPELKERNSKIPTFLYAMPFSSNRIFLEETSLVARPGLRM 176

Query: 340 DLLKKKLFSRLNTMGIRITKTYEEEWSYIPVGGSLPNTDQKNLAFGAAACMVHPATGYSV 399
           + +++++ +RL  +GI + +  E+E   IP+GG LP   Q+ +  G  A MVHP+TGY V
Sbjct: 177 EDIQERMAARLKHLGINVKRIEEDERCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMV 236

Query: 400 VRSLSEAPKYASIIATILKESHARGIVTHNRTKENLSMQAWNGLWPQEKKRQRAFFLFGL 459
            R+L+ AP  A+ I   L    +  +       + LS + W  LWP E++RQR FF FG+
Sbjct: 237 ARTLAAAPIVANAIVRYLGSPSSNSL-----RGDQLSAEVWRDLWPIERRRQREFFCFGM 291

Query: 460 ALILQLDIEGIRTFFRTFFCLPTWMWQGFLGSSLSSRDLALFALYMF 506
            ++L+LD++  R FF  FF L    W GFL S L   +L +F L +F
Sbjct: 292 DILLKLDLDATRRFFDAFFDLQPHYWHGFLSSRLFLPELLVFGLSLF 338