Miyakogusa Predicted Gene

Lj6g3v1201390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1201390.1 tr|C6ZKI9|C6ZKI9_MENPI ELF4-like protein
(Fragment) OS=Mentha piperita PE=2 SV=1,80.28,1e-18,DUF1313,Protein of
unknown function DUF1313,CUFF.59236.1
         (116 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G17455.2 | Symbols: ELF4-L4 | ELF4-like 4 | chr1:5997932-5998...   156   2e-39
AT1G17455.1 | Symbols: ELF4-L4 | ELF4-like 4 | chr1:5997932-5998...   156   2e-39
AT1G72630.1 | Symbols: ELF4-L2 | ELF4-like 2 | chr1:27344988-273...   149   3e-37
AT2G06255.1 | Symbols: ELF4-L3 | ELF4-like 3 | chr2:2459336-2459...   142   5e-35
AT2G29950.1 | Symbols: ELF4-L1 | ELF4-like 1 | chr2:12767790-127...    77   2e-15
AT2G40080.1 | Symbols: ELF4 | Protein of unknown function (DUF13...    77   2e-15

>AT1G17455.2 | Symbols: ELF4-L4 | ELF4-like 4 | chr1:5997932-5998276
           FORWARD LENGTH=114
          Length = 114

 Score =  156 bits (395), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 80/114 (70%), Positives = 90/114 (78%), Gaps = 2/114 (1%)

Query: 1   MENDTFSGVGHGILQQIDGKVLHTFQKSFVQVQNILDQNRVLINEINQNHESKVPDNLNR 60
           ME D  SG G      +DGK+L +FQKSFV VQ+ILDQNR+LINEINQNHESK PDNL R
Sbjct: 1   MEGDVLSGFGD--RHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGR 58

Query: 61  NVGLIKELNNNIRRVVDLYADLSSSFTKSIDVNSEGDSSGAVKSDGKACHKRNR 114
           NVGLIKELNNNIRRV  LY DLS SF +S+D +SEG+SSG +KSDGKA  KR R
Sbjct: 59  NVGLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSGTLKSDGKANQKRFR 112


>AT1G17455.1 | Symbols: ELF4-L4 | ELF4-like 4 | chr1:5997932-5998276
           FORWARD LENGTH=114
          Length = 114

 Score =  156 bits (395), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 80/114 (70%), Positives = 90/114 (78%), Gaps = 2/114 (1%)

Query: 1   MENDTFSGVGHGILQQIDGKVLHTFQKSFVQVQNILDQNRVLINEINQNHESKVPDNLNR 60
           ME D  SG G      +DGK+L +FQKSFV VQ+ILDQNR+LINEINQNHESK PDNL R
Sbjct: 1   MEGDVLSGFGD--RHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGR 58

Query: 61  NVGLIKELNNNIRRVVDLYADLSSSFTKSIDVNSEGDSSGAVKSDGKACHKRNR 114
           NVGLIKELNNNIRRV  LY DLS SF +S+D +SEG+SSG +KSDGKA  KR R
Sbjct: 59  NVGLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSGTLKSDGKANQKRFR 112


>AT1G72630.1 | Symbols: ELF4-L2 | ELF4-like 2 |
           chr1:27344988-27345347 FORWARD LENGTH=119
          Length = 119

 Score =  149 bits (377), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/112 (66%), Positives = 90/112 (80%), Gaps = 2/112 (1%)

Query: 1   MENDTFSGVGHGILQQIDGKVLHTFQKSFVQVQNILDQNRVLINEINQNHESKVPDNLNR 60
           ME D +SG G     Q+DGK+L  FQKSFVQVQ+ILDQNR+LINEINQNHESK  D+L R
Sbjct: 5   MEGDVYSGFGERY--QMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGR 62

Query: 61  NVGLIKELNNNIRRVVDLYADLSSSFTKSIDVNSEGDSSGAVKSDGKACHKR 112
           NVGLI+ELNNNIR V  LY DLS SF +S+D +SEG+S+G +KSDGKA +++
Sbjct: 63  NVGLIRELNNNIRTVASLYGDLSHSFARSVDASSEGESTGTLKSDGKANNQK 114


>AT2G06255.1 | Symbols: ELF4-L3 | ELF4-like 3 | chr2:2459336-2459665
           FORWARD LENGTH=109
          Length = 109

 Score =  142 bits (358), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 75/117 (64%), Positives = 94/117 (80%), Gaps = 9/117 (7%)

Query: 1   MENDTFSGV-GHGILQQIDGKVLHTFQKSFVQVQNILDQNRVLINEINQNHESKVPDNLN 59
           ME DT S + G G+  Q+DGK+L TF+KSFVQVQNILD NR+LINEINQNHESK+PDNL 
Sbjct: 1   MEGDTISRMMGSGV--QMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLG 58

Query: 60  RNVGLIKELNNNIRRVVDLYADLSSSFTKSIDVNSEGDSSGAVKSDGKACHKRNRPT 116
           RNVGLI+ELNNN+RRV  LY DLS++F+KS++ +SEGDS     S+G+  ++R RP 
Sbjct: 59  RNVGLIRELNNNVRRVAHLYVDLSNNFSKSMEASSEGDS-----SEGRG-NRRIRPA 109


>AT2G29950.1 | Symbols: ELF4-L1 | ELF4-like 1 |
           chr2:12767790-12768167 FORWARD LENGTH=125
          Length = 125

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 37/74 (50%), Positives = 52/74 (70%)

Query: 18  DGKVLHTFQKSFVQVQNILDQNRVLINEINQNHESKVPDNLNRNVGLIKELNNNIRRVVD 77
           D +V  T    F + Q  LDQNR LI  +N+NH S++PDN++RNVGLI E+N NI +V++
Sbjct: 34  DVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVGLINEINGNISQVME 93

Query: 78  LYADLSSSFTKSID 91
           +Y+DLS +F K  D
Sbjct: 94  IYSDLSLNFAKKFD 107


>AT2G40080.1 | Symbols: ELF4 | Protein of unknown function
          (DUF1313) | chr2:16734545-16734880 REVERSE LENGTH=111
          Length = 111

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 55/70 (78%)

Query: 18 DGKVLHTFQKSFVQVQNILDQNRVLINEINQNHESKVPDNLNRNVGLIKELNNNIRRVVD 77
          D  +     ++F QVQ++LD+NR LI ++N NH+S++ DN+++NV LI+ELN NI +VV+
Sbjct: 22 DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVN 81

Query: 78 LYADLSSSFT 87
          +Y+DL++SF+
Sbjct: 82 MYSDLNTSFS 91