Miyakogusa Predicted Gene

Lj6g3v1201180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1201180.1 Non Chatacterized Hit- tr|I1MHF0|I1MHF0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25941
PE,81.02,0,DENN,DENN domain; UDENN,uDENN domain; DDENN,dDENN domain;
Domain always found upstream of DENN domai,CUFF.59335.1
         (795 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G35560.1 | Symbols:  | DENN (AEX-3) domain-containing protein...   929   0.0  
AT2G20320.1 | Symbols:  | DENN (AEX-3) domain-containing protein...   341   1e-93
AT1G49040.3 | Symbols: SCD1 | stomatal cytokinesis defective / S...    68   3e-11
AT1G49040.1 | Symbols: SCD1 | stomatal cytokinesis defective / S...    68   3e-11
AT1G49040.2 | Symbols: SCD1 | stomatal cytokinesis defective / S...    67   3e-11

>AT5G35560.1 | Symbols:  | DENN (AEX-3) domain-containing protein |
           chr5:13742458-13747464 REVERSE LENGTH=765
          Length = 765

 Score =  929 bits (2401), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/800 (60%), Positives = 585/800 (73%), Gaps = 53/800 (6%)

Query: 4   IAKEEE-SGSPSWGASFFTQTTEDVAKAVAAA---MNSERPSVIYSSKTDHGGSQLQRLQ 59
           +AK EE S SPSWGASFF QT+EDVA A AAA   +N  RPSV++SSK +   S L+RLQ
Sbjct: 1   MAKNEEGSSSPSWGASFFMQTSEDVAMAFAAAASAINPPRPSVVFSSKDEGSDSPLERLQ 60

Query: 60  SQVTKLIKGFSGTSEVKYANYNPEILTSQKRQWAANFHLQYMDHKSWKEPSRLFESMVVV 119
            QV+K +K F  T + K   YNPE+LTSQKRQWA     ++ DHK  K+PSRLFES+VVV
Sbjct: 61  RQVSKAVKNFYETPKTKSVLYNPEVLTSQKRQWA-----KFQDHKPLKDPSRLFESVVVV 115

Query: 120 GLHPNCDIQALQRQYIDRKSEGS-GKLRSALGYHNQSRVEPNLEPQVLFAYPPDKQLPLK 178
           GLHPNCDIQAL+RQYI RKSEGS G+LRSAL   N SRVEP+LEPQVL  YPPDKQ P+K
Sbjct: 116 GLHPNCDIQALERQYIARKSEGSSGRLRSALVSQNHSRVEPSLEPQVLLVYPPDKQPPIK 175

Query: 179 DKDLFSFCFPGGLEVNAVERTPSMSELNEILFGQEHLKQRDLSFVFRLQGADNSTLYGCC 238
            KDL SFCFPGG+EV+AVERTPSMSEL+EI+  QEHL+  DLSFVFRLQ ADNSTLYGCC
Sbjct: 176 YKDLHSFCFPGGIEVHAVERTPSMSELSEIILSQEHLRPSDLSFVFRLQVADNSTLYGCC 235

Query: 239 VLVDELVQKPSGLLSLILDKQSSHSSLRRHIITTKRCYCILSRLPFFELHFGVLNSIFMQ 298
           +LV+E+V KPS LLS +LDKQ + SSL R+++TT+RCYC+L+RLPFFELHFGVLNSIF++
Sbjct: 236 LLVEEIVNKPSRLLSTVLDKQPACSSLSRYVMTTRRCYCVLTRLPFFELHFGVLNSIFLE 295

Query: 299 ERLEWLTSSVEDLNLEIVEGSYDEENSGENSECVLMNDRPTEDRDDDNPTISQSKLGSSL 358
           ERLE L S +   +LE      +E++         +ND   + RD  +      + GS L
Sbjct: 296 ERLEHLMSGISCASLEPPTDFSNEDS---------LNDSSPQQRDSGDTKEQTVEAGSKL 346

Query: 359 P--ENIEGDSSHLEKQMVNEELHTFKEGVNNDTVVPIDPEPDIKTAKEESGCKNAEDSDL 416
           P  + I  + +    Q  ++   +       D  +PI     IK  +E   C        
Sbjct: 347 PKADEISDNGTCEANQKADDSAESIDRVTKADDSLPI-----IKQGRE--SC-------- 391

Query: 417 CRDAFVTNKQSEDRRLPNAILPLLR-XXXXXXXXXXXXXXXXPCEDRNFRSDADDTETEE 475
                          LP    PLLR                 PCE R+ R+ ADDTET+E
Sbjct: 392 ---------------LPEPG-PLLRCPYLDEISDSSTSFQAAPCERRHSRTSADDTETDE 435

Query: 476 ASISGQEDLNDLHDILEWAKANNCGPLQIISEYYRLSVPARGSALTFRPLEHLHHLEYHR 535
           AS SGQ+D +   DILEWAK+   G LQI+ EYY+L  PARGS +TF PLEHLH +EYHR
Sbjct: 436 ASFSGQDDTSSNFDILEWAKSKKNGSLQILCEYYQLKCPARGSTITFHPLEHLHPVEYHR 495

Query: 536 PAETVLHLAGSTVDLKSCSTRLEFAEAHISLLAEEEATSLSIWAVACMCGTLRLENVLTL 595
           P E  LH  GS +DL+SCST LE AEAH +L+AEEEA +LS WAVA +CG+LRL+NVL +
Sbjct: 496 PNEVALHTPGSAIDLRSCSTSLELAEAHTTLMAEEEAAALSTWAVASLCGSLRLDNVLMI 555

Query: 596 FAGALLEKQIVIVCSNLGILSASVLSVIPLIRPYQWQSLLMPVLPNDMLEFLDAPVPYIV 655
            AGALLEKQIV VCSNLGIL+ASVLS+IP+IRP++WQSLLMPVLP+DMLEFLDAPVPYIV
Sbjct: 556 LAGALLEKQIVFVCSNLGILAASVLSIIPVIRPFRWQSLLMPVLPDDMLEFLDAPVPYIV 615

Query: 656 GIRNKTNEIQSKLTNVILVDANKNQVKSPTVPQLPRQKELISSLRPYHATLVGESYLGRR 715
           G++NKT+E+QSKLTNVI+VD  KNQVKSP++PQLP+ ++L ++L PYH+ LVGESYL ++
Sbjct: 616 GVKNKTSEVQSKLTNVIVVDILKNQVKSPSMPQLPQYRDLYNALSPYHSKLVGESYLAKK 675

Query: 716 RPVYECTEVQTEAAKGFLSVLRSYLDSLCGNIRSHTITNVQSNDDKVSLLLKESYIDSFP 775
           RPVYECT+VQ +AAKGF+ VLRSYLDSLC N++SHTITNVQSN+DKVSLLLKES+IDSFP
Sbjct: 676 RPVYECTDVQVDAAKGFMDVLRSYLDSLCSNLQSHTITNVQSNNDKVSLLLKESFIDSFP 735

Query: 776 YRDRAFMKLFVDTQLFSVHT 795
            R R FMKLFVDTQLFSVHT
Sbjct: 736 SRQRPFMKLFVDTQLFSVHT 755


>AT2G20320.1 | Symbols:  | DENN (AEX-3) domain-containing protein |
            chr2:8767082-8772271 FORWARD LENGTH=1029
          Length = 1029

 Score =  341 bits (874), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 169/311 (54%), Positives = 223/311 (71%), Gaps = 8/311 (2%)

Query: 485  NDLHD--ILEWAKANNCGPLQIISEYYRLSVPARGSALTFRPLEHLHHLEYHRPAETVLH 542
            ND  D  ILEWAK +N   LQ++  Y+ L++P+RGS + F PLEHL  + Y RP  + L 
Sbjct: 711  NDFGDDLILEWAKDHNNDSLQLVCGYHSLAIPSRGSEVVFHPLEHLQSISYTRPPVSALG 770

Query: 543  LAGSTVDLKSCSTRLEFAEAHISLLAEEEATSLSIWAVACMCGTLRLENVLTLFAGALLE 602
            L+   +    CS+  +  E +  L A EEA  LS+W  A +C  L LE +++L AG LLE
Sbjct: 771  LSEEYI----CSS--DSKEINARLAAAEEAMGLSMWTTATVCRILSLETIMSLLAGVLLE 824

Query: 603  KQIVIVCSNLGILSASVLSVIPLIRPYQWQSLLMPVLPNDMLEFLDAPVPYIVGIRNKTN 662
            KQIVI+C NLG+LSA VLS++P+IRP+QWQSLL+PVLP  M +FL+APVP++VGI +K  
Sbjct: 825  KQIVIICPNLGVLSAIVLSLVPMIRPFQWQSLLLPVLPGRMFDFLEAPVPFLVGIHSKPI 884

Query: 663  EIQSKLTNVILVDANKNQVKSPTVPQLPRQKELISSLRPYHATLVGESYLGRRRPVYECT 722
            + + K +N+ILV+   NQVK   +P LP+ +EL++ L P HATL  +S   RR PVY+C 
Sbjct: 885  DWKVKTSNLILVNILNNQVKICNMPALPQCRELMAQLAPIHATLAHQSSNARRHPVYKCN 944

Query: 723  EVQTEAAKGFLSVLRSYLDSLCGNIRSHTITNVQSNDDKVSLLLKESYIDSFPYRDRAFM 782
            EVQ EAA  FL V+R Y++SLC ++ SHTIT+VQSN D+VSLLLK+S+IDSFP RDR F+
Sbjct: 945  EVQAEAATKFLRVMRDYMESLCSDLHSHTITSVQSNSDRVSLLLKDSFIDSFPGRDRPFI 1004

Query: 783  KLFVDTQLFSV 793
            KLFVDTQLFSV
Sbjct: 1005 KLFVDTQLFSV 1015



 Score =  231 bits (588), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 112/263 (42%), Positives = 167/263 (63%), Gaps = 5/263 (1%)

Query: 55  LQRLQSQVTKLIKGFSGTSEVKYANYNPEILTSQKRQWAANFHLQYMDHKSWKEPSRLFE 114
            QRL++Q+ K  +G S   E     +NPE+L +QKRQW      + +D    KEP+ LFE
Sbjct: 287 FQRLKTQMQKAWRGVSNLREDNRPTFNPEVLANQKRQWYQLHSSKALDQTKLKEPASLFE 346

Query: 115 SMVVVGLHPNCDIQALQRQYIDRKSEGSGKLRSALGYHNQSRVE----PNLEPQVLFAYP 170
             ++VGLHP  +++ ++  +  RK       R  +  +   R      P LEPQ+LF YP
Sbjct: 347 HFIIVGLHPETNLRPVEEAFRRRKKWEMEMSRYEVADYRILRHRGPQFPILEPQILFKYP 406

Query: 171 PDKQLPLKDKDLFSFCFPGGLEVNAVERTPSMSELNEILFGQEHLKQRDLSFVFRLQGAD 230
           P K++ ++ KDL +FCFPGG++   +ERTPS+S+LNE+++GQEHL   D SF+F  + AD
Sbjct: 407 PGKKVAMRPKDLATFCFPGGVKARLLERTPSLSDLNELVYGQEHLGTDDSSFIFSFKVAD 466

Query: 231 NSTLYGCCVLVDELVQKPSGLLSLILDKQSSHSSLRRHIITTKRCYCILSRLPFFELHFG 290
           ++TLYG C+ V E+VQ+P G+LS      SS     R +++  RCYC+L+R+PFFELHF 
Sbjct: 467 DATLYGVCLHVSEIVQRPPGVLSTASPLHSSGGG-SRFLVSAPRCYCLLTRVPFFELHFE 525

Query: 291 VLNSIFMQERLEWLTSSVEDLNL 313
           +LNS+  QERL+ +T  V +++L
Sbjct: 526 MLNSMIAQERLKRITEFVSEMSL 548


>AT1G49040.3 | Symbols: SCD1 | stomatal cytokinesis defective / SCD1
           protein (SCD1) | chr1:18140457-18148826 REVERSE
           LENGTH=1040
          Length = 1040

 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 69/115 (60%), Gaps = 3/115 (2%)

Query: 587 LRLENVLTLFAGALLEKQIVIVCSNLGILSASVLSVIPLIRPYQWQSLLMPVLPNDMLEF 646
           L ++N++ LF   L+E++I+I  +   +L+    S+  LI P++W  + +P+L    +++
Sbjct: 214 LDVDNLIKLFTSVLVERRILIRSNKYSLLTLVSESICHLIYPFRWLQVYIPLLFFSGVDY 273

Query: 647 LDAPVPYIVGIRNKTNEIQSKLTNVILVDANKNQV-KSPTVPQLPRQKELISSLR 700
           +DAP PY++G+ +  +     +  V++VD + NQ+  S  +PQ+P  +   S+LR
Sbjct: 274 IDAPTPYMMGLHSDVDTSNLAMDGVVVVDLDINQITTSEEIPQIPEPE--FSTLR 326


>AT1G49040.1 | Symbols: SCD1 | stomatal cytokinesis defective / SCD1
           protein (SCD1) | chr1:18139419-18148826 REVERSE
           LENGTH=1187
          Length = 1187

 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 64/105 (60%), Gaps = 1/105 (0%)

Query: 587 LRLENVLTLFAGALLEKQIVIVCSNLGILSASVLSVIPLIRPYQWQSLLMPVLPNDMLEF 646
           L ++N++ LF   L+E++I+I  +   +L+    S+  LI P++W  + +P+L    +++
Sbjct: 214 LDVDNLIKLFTSVLVERRILIRSNKYSLLTLVSESICHLIYPFRWLQVYIPLLFFSGVDY 273

Query: 647 LDAPVPYIVGIRNKTNEIQSKLTNVILVDANKNQV-KSPTVPQLP 690
           +DAP PY++G+ +  +     +  V++VD + NQ+  S  +PQ+P
Sbjct: 274 IDAPTPYMMGLHSDVDTSNLAMDGVVVVDLDINQITTSEEIPQIP 318


>AT1G49040.2 | Symbols: SCD1 | stomatal cytokinesis defective / SCD1
           protein (SCD1) | chr1:18142007-18148826 REVERSE
           LENGTH=909
          Length = 909

 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 69/115 (60%), Gaps = 3/115 (2%)

Query: 587 LRLENVLTLFAGALLEKQIVIVCSNLGILSASVLSVIPLIRPYQWQSLLMPVLPNDMLEF 646
           L ++N++ LF   L+E++I+I  +   +L+    S+  LI P++W  + +P+L    +++
Sbjct: 214 LDVDNLIKLFTSVLVERRILIRSNKYSLLTLVSESICHLIYPFRWLQVYIPLLFFSGVDY 273

Query: 647 LDAPVPYIVGIRNKTNEIQSKLTNVILVDANKNQV-KSPTVPQLPRQKELISSLR 700
           +DAP PY++G+ +  +     +  V++VD + NQ+  S  +PQ+P  +   S+LR
Sbjct: 274 IDAPTPYMMGLHSDVDTSNLAMDGVVVVDLDINQITTSEEIPQIPEPE--FSTLR 326