Miyakogusa Predicted Gene

Lj6g3v1187470.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1187470.2 Non Chatacterized Hit- tr|I1MHF8|I1MHF8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20654
PE,82.72,0,TTL,Tubulin-tyrosine ligase; RNI-like,NULL; seg,NULL;
SUBFAMILY NOT NAMED,NULL; TUBULIN TYROSINE LIG,CUFF.59219.2
         (866 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G77550.1 | Symbols:  | tubulin-tyrosine ligases;tubulin-tyros...  1164   0.0  

>AT1G77550.1 | Symbols:  | tubulin-tyrosine ligases;tubulin-tyrosine
           ligases | chr1:29138490-29142965 REVERSE LENGTH=855
          Length = 855

 Score = 1164 bits (3010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 564/857 (65%), Positives = 685/857 (79%), Gaps = 4/857 (0%)

Query: 10  RIRTYEEFAQVHALLLASSGLPQSLFRRLFQKLAGETFDGGNHFQIEPCEDGRMRRLVLT 69
           +I ++++F +VH +LLA+SGLP  L+ RLF+KLA +TFDGG++FQIE CED + R+L+LT
Sbjct: 3   KIESFDDFVKVHGILLAASGLPPKLYPRLFEKLAYDTFDGGDYFQIESCEDDQRRKLLLT 62

Query: 70  SDSMPKDSDVFLIDHAWTFRLPDAYNQLLEVPGLAERMGSLMCVDIDMNLEGEGEVSEKP 129
           ++SMPKDSDVFL+DHAWTFRLPDAY QL E+PGLAERM SLM VDID++  GE EV+E+ 
Sbjct: 63  AESMPKDSDVFLVDHAWTFRLPDAYKQLKEIPGLAERMASLMSVDIDVD-AGEEEVAEEL 121

Query: 130 DVLEVLESEVRETKEKGDGKLRWLELEGXXXXXXXXXXXXXXXKFPDLVSLSLYGNKLNR 189
            V +++++E+R   +KG   LRWLELEG               KF DLV+LSL GNK+  
Sbjct: 122 SVDQIIDNEIRYAADKGYDSLRWLELEGLGVDDSLLSLHLPS-KFQDLVALSLIGNKIES 180

Query: 190 AEVVVQEVSKFKHLKGLWLNNNLVLKECNDKIAGAILKELPELEIYNSNFTSNFGEWALG 249
           A+VV+QE+ KFK+LK LWLN+N VL++   ++A  IL+  P LEIYNS FT N+G WALG
Sbjct: 181 ADVVIQEIVKFKNLKALWLNDNPVLQKSERQMADEILQGCPSLEIYNSCFTPNYGLWALG 240

Query: 250 FCAGIYEKDNPASSDHADSPLQSVSTLDISNRNIHNLINKAFSPILFSSLSHLNIHGNPL 309
           FC  I+ KDNP      D PL +V++LD+SNR+IHNL+NKAFS      LSHLNI GN L
Sbjct: 241 FCGDIFGKDNPGCV-QQDQPLCNVTSLDLSNRSIHNLVNKAFSVHEMPLLSHLNIRGNSL 299

Query: 310 EQNSVGDLLDLLRRFPCLCSLGVDIPGPLGGSAIEILESLPNISELNGISASQILETSKQ 369
           +QNSVG+LL++L+ FP L SL VDIPGPLG +A+EILESL N+S LNG+  ++ILET K 
Sbjct: 300 DQNSVGELLEVLKLFPSLSSLEVDIPGPLGINALEILESLSNLSLLNGVDTAKILETGKH 359

Query: 370 VIDSALLPRVSEWTPDEPLADRIVNGMWKYLMTYRLADEEKLDETSVWYVMDELGSALRH 429
           V+DS L PR+ E  PD+ L DR+++ MW Y + YRLAD+EKLDETS+WYVMDELGSALRH
Sbjct: 360 VVDSMLQPRIPELNPDDTLVDRVLDAMWLYALNYRLADDEKLDETSLWYVMDELGSALRH 419

Query: 430 SDEPNFRVAPFLFMPEGNLASAVSFSILWPTQNLQKGDECTRDFLLGIGEDKQRSARLTA 489
           SDEPNF+VAPFLFMP G L SAVS+S++WP ++ QKGDECTRDFL GIGEDKQRSARLTA
Sbjct: 420 SDEPNFKVAPFLFMPSGKLESAVSYSVMWPIKHSQKGDECTRDFLSGIGEDKQRSARLTA 479

Query: 490 WFHTPENYFIQEFEKHNQKLGSTSLIPPTVQSSETRSIHQPDGRPLRVYTDIPHVEENLT 549
           WF TPENYFI EFEK+ QKL + +        S +RSI   DG PL VYTD+P VEE LT
Sbjct: 480 WFQTPENYFIHEFEKYQQKLQAKAFESKPSNPSVSRSIQHSDGSPLLVYTDLPQVEEFLT 539

Query: 550 HPEFAITKEPKDADIIWTCMQIDEDTKKATGITDQQYINQFPFEACLVMKHHLAETIQKA 609
            PEF IT EPKDADI+WT +Q+D++ KK  GITD QYINQFPFEACLVMKHHLAETIQ  
Sbjct: 540 RPEFVITNEPKDADILWTSVQVDDELKKEVGITDDQYINQFPFEACLVMKHHLAETIQMG 599

Query: 610 LGSPQWLQHTYNLETHLSQLIGDYYLRKREGQDNLWILKPWNMARTIDTTVTDNLPAIIR 669
            GSP+WLQ TYNLET LSQ IGDY +RKR+  +NLWILKPWNMARTIDT++TDNL AIIR
Sbjct: 600 YGSPKWLQPTYNLETQLSQFIGDYCVRKRDQLNNLWILKPWNMARTIDTSITDNLSAIIR 659

Query: 670 LMETGPKICQKYIEKPALFQGKKFDLRYIVLVRSMHPLEIFLSDCFWVRIANNQYSLERR 729
           +METGPKICQKYIE PALF+G KFDLRY+VLVRS+ PLEI+L + FWVR++NN YSLE+ 
Sbjct: 660 MMETGPKICQKYIEHPALFKGNKFDLRYVVLVRSIDPLEIYLIEIFWVRLSNNPYSLEKH 719

Query: 730 SLFEYETHFTVMNYRGKINHKNIKDFVKEFEEEHQVKWLDIHTRVRNMIRSVFEAAAVAH 789
           S FEYETHFTVMNY  K+NHK   +FV+EFE+EH VKW+DIH +V+ +IR+VFEAAA+AH
Sbjct: 720 SFFEYETHFTVMNYGRKLNHKPTAEFVREFEQEHNVKWMDIHEKVKQVIRAVFEAAALAH 779

Query: 790 PEMHSPTSRAMYGVDVMLNSSFQPKLLEVTYCPDCTRACKYDMDIVVGEGGVSKGCDFFN 849
           PEM SP SRAMYGVDVML+SSF+PK+LEVTYCPDC RACKYDM+ + G+ G+ KG DFFN
Sbjct: 780 PEMQSPKSRAMYGVDVMLDSSFEPKILEVTYCPDCMRACKYDMETIDGK-GIVKGGDFFN 838

Query: 850 NVFRCLFLDEISQVSPL 866
           NVF CLFLDE + V+PL
Sbjct: 839 NVFGCLFLDETAHVTPL 855