Miyakogusa Predicted Gene

Lj6g3v1177310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1177310.1 tr|G7IGG7|G7IGG7_MEDTR
Methylthioribose-1-phosphate isomerase OS=Medicago truncatula
GN=MTR_2g042450,85.16,0,IF-2B,Initiation factor 2B-related; no
description,NULL; seg,NULL; Salvage_MtnA,Putative
translation,CUFF.59203.1
         (375 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G05830.1 | Symbols:  | NagB/RpiA/CoA transferase-like superfa...   496   e-141
AT2G05830.4 | Symbols:  | NagB/RpiA/CoA transferase-like superfa...   427   e-120
AT2G05830.3 | Symbols:  | NagB/RpiA/CoA transferase-like superfa...   427   e-120
AT2G05830.2 | Symbols:  | NagB/RpiA/CoA transferase-like superfa...   427   e-120
AT2G44070.1 | Symbols:  | NagB/RpiA/CoA transferase-like superfa...    52   1e-06

>AT2G05830.1 | Symbols:  | NagB/RpiA/CoA transferase-like
           superfamily protein | chr2:2229759-2231839 FORWARD
           LENGTH=374
          Length = 374

 Score =  496 bits (1278), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 246/364 (67%), Positives = 286/364 (78%), Gaps = 2/364 (0%)

Query: 11  GTNTLQSIRYNRGSLQLLDQRKLPLETIYLEIRDSTDGWNAIRDMVVRGXXXXXXXXXXX 70
           G  TL++I Y  GSLQLLDQRKLPLETIYLEIRD++DGW+AI++MVVRG           
Sbjct: 5   GDTTLKAICYKPGSLQLLDQRKLPLETIYLEIRDASDGWSAIQEMVVRGAPAIAIAAALS 64

Query: 71  XXVEVSNLGDFSGSPSDAASFLQNKLEYLVSSRPTAVNLSDAATKLKEVISGAAATASEA 130
             VEV N   F GS SDA +FL+NKL+YLVSSRPTAVNL+DAA KLK VI+ A ATA+EA
Sbjct: 65  LAVEVFNFHGFDGSASDAVAFLENKLDYLVSSRPTAVNLADAALKLKHVIAKALATATEA 124

Query: 131 KSVFQDYIEAAEIMLVDDVASNRAIGSYGATFIQHQVEKP-KLSVLTHCNTGSLATAGYG 189
           KS+F+ YIEA+E ML DDV SN+AIG++G + ++ Q + P KLSVLTHCNTGSLATAGYG
Sbjct: 125 KSIFKAYIEASEDMLEDDVVSNKAIGNFGLSLLRQQAKNPDKLSVLTHCNTGSLATAGYG 184

Query: 190 TALGVIRALHSGGALERAYCTETRPFNQGSRLTAFELVHDKIPXXXXXXXXXXXLMKSXX 249
           TALGVIRALH+ G LERAYCTETRPFNQGSRLTAFELVH+KIP           LMK   
Sbjct: 185 TALGVIRALHTQGILERAYCTETRPFNQGSRLTAFELVHEKIPATLIADSAAAALMKDGR 244

Query: 250 XXXXXXXXXXXXSNGDTANKIGTYSVALCAKFHNVPFYVAAPLTSIDLSLSSGEEIVIEE 309
                       SNGDTANKIGTYS+ALCAK H +PFYVAAPLTS+DLSLSSG+EIVIEE
Sbjct: 245 VDGVIVGADRVASNGDTANKIGTYSLALCAKHHGIPFYVAAPLTSVDLSLSSGKEIVIEE 304

Query: 310 RSPKELLNSRGGLGEQVAASGISVWNPAFDVTPANIISGIITEKGVITKSSAADAFDIKA 369
           RSPKEL+++ GGLGE++AA GISVWNPAFD+TPA +I+GIITEKGVITK +  D FDI +
Sbjct: 305 RSPKELMHTHGGLGERIAAPGISVWNPAFDMTPAELIAGIITEKGVITK-NGNDTFDISS 363

Query: 370 FIQK 373
           F +K
Sbjct: 364 FAKK 367


>AT2G05830.4 | Symbols:  | NagB/RpiA/CoA transferase-like
           superfamily protein | chr2:2229964-2231839 FORWARD
           LENGTH=328
          Length = 328

 Score =  427 bits (1099), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 214/321 (66%), Positives = 248/321 (77%), Gaps = 2/321 (0%)

Query: 54  DMVVRGXXXXXXXXXXXXXVEVSNLGDFSGSPSDAASFLQNKLEYLVSSRPTAVNLSDAA 113
           +MVVRG             VEV N   F GS SDA +FL+NKL+YLVSSRPTAVNL+DAA
Sbjct: 2   EMVVRGAPAIAIAAALSLAVEVFNFHGFDGSASDAVAFLENKLDYLVSSRPTAVNLADAA 61

Query: 114 TKLKEVISGAAATASEAKSVFQDYIEAAEIMLVDDVASNRAIGSYGATFIQHQVEKP-KL 172
            KLK VI+ A ATA+EAKS+F+ YIEA+E ML DDV SN+AIG++G + ++ Q + P KL
Sbjct: 62  LKLKHVIAKALATATEAKSIFKAYIEASEDMLEDDVVSNKAIGNFGLSLLRQQAKNPDKL 121

Query: 173 SVLTHCNTGSLATAGYGTALGVIRALHSGGALERAYCTETRPFNQGSRLTAFELVHDKIP 232
           SVLTHCNTGSLATAGYGTALGVIRALH+ G LERAYCTETRPFNQGSRLTAFELVH+KIP
Sbjct: 122 SVLTHCNTGSLATAGYGTALGVIRALHTQGILERAYCTETRPFNQGSRLTAFELVHEKIP 181

Query: 233 XXXXXXXXXXXLMKSXXXXXXXXXXXXXXSNGDTANKIGTYSVALCAKFHNVPFYVAAPL 292
                      LMK               SNGDTANKIGTYS+ALCAK H +PFYVAAPL
Sbjct: 182 ATLIADSAAAALMKDGRVDGVIVGADRVASNGDTANKIGTYSLALCAKHHGIPFYVAAPL 241

Query: 293 TSIDLSLSSGEEIVIEERSPKELLNSRGGLGEQVAASGISVWNPAFDVTPANIISGIITE 352
           TS+DLSLSSG+EIVIEERSPKEL+++ GGLGE++AA GISVWNPAFD+TPA +I+GIITE
Sbjct: 242 TSVDLSLSSGKEIVIEERSPKELMHTHGGLGERIAAPGISVWNPAFDMTPAELIAGIITE 301

Query: 353 KGVITKSSAADAFDIKAFIQK 373
           KGVITK +  D FDI +F +K
Sbjct: 302 KGVITK-NGNDTFDISSFAKK 321


>AT2G05830.3 | Symbols:  | NagB/RpiA/CoA transferase-like
           superfamily protein | chr2:2230057-2231839 FORWARD
           LENGTH=326
          Length = 326

 Score =  427 bits (1098), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 214/320 (66%), Positives = 247/320 (77%), Gaps = 2/320 (0%)

Query: 55  MVVRGXXXXXXXXXXXXXVEVSNLGDFSGSPSDAASFLQNKLEYLVSSRPTAVNLSDAAT 114
           MVVRG             VEV N   F GS SDA +FL+NKL+YLVSSRPTAVNL+DAA 
Sbjct: 1   MVVRGAPAIAIAAALSLAVEVFNFHGFDGSASDAVAFLENKLDYLVSSRPTAVNLADAAL 60

Query: 115 KLKEVISGAAATASEAKSVFQDYIEAAEIMLVDDVASNRAIGSYGATFIQHQVEKP-KLS 173
           KLK VI+ A ATA+EAKS+F+ YIEA+E ML DDV SN+AIG++G + ++ Q + P KLS
Sbjct: 61  KLKHVIAKALATATEAKSIFKAYIEASEDMLEDDVVSNKAIGNFGLSLLRQQAKNPDKLS 120

Query: 174 VLTHCNTGSLATAGYGTALGVIRALHSGGALERAYCTETRPFNQGSRLTAFELVHDKIPX 233
           VLTHCNTGSLATAGYGTALGVIRALH+ G LERAYCTETRPFNQGSRLTAFELVH+KIP 
Sbjct: 121 VLTHCNTGSLATAGYGTALGVIRALHTQGILERAYCTETRPFNQGSRLTAFELVHEKIPA 180

Query: 234 XXXXXXXXXXLMKSXXXXXXXXXXXXXXSNGDTANKIGTYSVALCAKFHNVPFYVAAPLT 293
                     LMK               SNGDTANKIGTYS+ALCAK H +PFYVAAPLT
Sbjct: 181 TLIADSAAAALMKDGRVDGVIVGADRVASNGDTANKIGTYSLALCAKHHGIPFYVAAPLT 240

Query: 294 SIDLSLSSGEEIVIEERSPKELLNSRGGLGEQVAASGISVWNPAFDVTPANIISGIITEK 353
           S+DLSLSSG+EIVIEERSPKEL+++ GGLGE++AA GISVWNPAFD+TPA +I+GIITEK
Sbjct: 241 SVDLSLSSGKEIVIEERSPKELMHTHGGLGERIAAPGISVWNPAFDMTPAELIAGIITEK 300

Query: 354 GVITKSSAADAFDIKAFIQK 373
           GVITK +  D FDI +F +K
Sbjct: 301 GVITK-NGNDTFDISSFAKK 319


>AT2G05830.2 | Symbols:  | NagB/RpiA/CoA transferase-like
           superfamily protein | chr2:2230057-2231839 FORWARD
           LENGTH=326
          Length = 326

 Score =  427 bits (1098), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 214/320 (66%), Positives = 247/320 (77%), Gaps = 2/320 (0%)

Query: 55  MVVRGXXXXXXXXXXXXXVEVSNLGDFSGSPSDAASFLQNKLEYLVSSRPTAVNLSDAAT 114
           MVVRG             VEV N   F GS SDA +FL+NKL+YLVSSRPTAVNL+DAA 
Sbjct: 1   MVVRGAPAIAIAAALSLAVEVFNFHGFDGSASDAVAFLENKLDYLVSSRPTAVNLADAAL 60

Query: 115 KLKEVISGAAATASEAKSVFQDYIEAAEIMLVDDVASNRAIGSYGATFIQHQVEKP-KLS 173
           KLK VI+ A ATA+EAKS+F+ YIEA+E ML DDV SN+AIG++G + ++ Q + P KLS
Sbjct: 61  KLKHVIAKALATATEAKSIFKAYIEASEDMLEDDVVSNKAIGNFGLSLLRQQAKNPDKLS 120

Query: 174 VLTHCNTGSLATAGYGTALGVIRALHSGGALERAYCTETRPFNQGSRLTAFELVHDKIPX 233
           VLTHCNTGSLATAGYGTALGVIRALH+ G LERAYCTETRPFNQGSRLTAFELVH+KIP 
Sbjct: 121 VLTHCNTGSLATAGYGTALGVIRALHTQGILERAYCTETRPFNQGSRLTAFELVHEKIPA 180

Query: 234 XXXXXXXXXXLMKSXXXXXXXXXXXXXXSNGDTANKIGTYSVALCAKFHNVPFYVAAPLT 293
                     LMK               SNGDTANKIGTYS+ALCAK H +PFYVAAPLT
Sbjct: 181 TLIADSAAAALMKDGRVDGVIVGADRVASNGDTANKIGTYSLALCAKHHGIPFYVAAPLT 240

Query: 294 SIDLSLSSGEEIVIEERSPKELLNSRGGLGEQVAASGISVWNPAFDVTPANIISGIITEK 353
           S+DLSLSSG+EIVIEERSPKEL+++ GGLGE++AA GISVWNPAFD+TPA +I+GIITEK
Sbjct: 241 SVDLSLSSGKEIVIEERSPKELMHTHGGLGERIAAPGISVWNPAFDMTPAELIAGIITEK 300

Query: 354 GVITKSSAADAFDIKAFIQK 373
           GVITK +  D FDI +F +K
Sbjct: 301 GVITK-NGNDTFDISSFAKK 319


>AT2G44070.1 | Symbols:  | NagB/RpiA/CoA transferase-like
           superfamily protein | chr2:18231097-18232469 REVERSE
           LENGTH=333
          Length = 333

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 121/297 (40%), Gaps = 35/297 (11%)

Query: 80  DFSGSPS-----DAASFLQNKLEYLVSSRPTAVNLSDAATKLKEVISGAAATASEAKSVF 134
           D+S  P      D  + + + + +L+  RP ++++ +A   +K  I+    T SE+++  
Sbjct: 37  DYSTPPENTLNRDMTAQISSYVSFLIECRPLSISMGNAIRFVKNRIAKLPITLSESEA-- 94

Query: 135 QDYIEAAEIMLVDDVASNRAIGSYGATFIQHQVEKPKLSVLTHCNTGSLATAGYGTALGV 194
               +A+    ++   + + IG+     ++H V K +       +   L T G  T + +
Sbjct: 95  ----KASLHSDIERFINEKIIGA-DTVIVEHAVTKIR-------DGDVLLTYGSSTVIEM 142

Query: 195 IRA-LHSGGALERAYCTETRPFNQGSRLTAFELVHDKIPXXXXXXXXXXXLMKSXXXXXX 253
           I    H  G   R +  ++RP  QG +L    L+   I            +M        
Sbjct: 143 ILVHAHELGKKFRVFVVDSRPKLQG-KLLLRRLIKRGINCTYTHITAISYIMHQVTKVFL 201

Query: 254 XXXXXXXXSNGDTANKIGTYSVALCAKFHNVPFYVAAPL------TSIDLSLSS---GEE 304
                   SNG   +++GT  VA+ A    VP  V            +D S+ S   G+ 
Sbjct: 202 GASSVF--SNGTVYSRVGTACVAMVANAFRVPVLVCCEAYKFHEKVQLDYSICSNELGDP 259

Query: 305 IVIEERSPKELLNSRGGLGEQVAASGISVWNPAFDVTPANIISGIITEKGVITKSSA 361
             I +   +E +N   GL      + +   N  +D TP++ IS IIT+ G++  +S 
Sbjct: 260 NAISKVHGREDINYLNGLTNN---AKLKFLNLMYDATPSDYISMIITDYGMVPPTSV 313