Miyakogusa Predicted Gene

Lj6g3v1177270.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1177270.1 Non Chatacterized Hit- tr|C5YBE5|C5YBE5_SORBI
Putative uncharacterized protein Sb06g021180
OS=Sorghu,55.38,0.00000000006,INTER-ALPHA-TRYPSIN INHIBITOR HEAVY
CHAIN,NULL; VON WILLEBRAND FACTOR, TYPE A DOMAIN
CONTAINING,NULL,CUFF.59198.1
         (273 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19110.1 | Symbols:  | inter-alpha-trypsin inhibitor heavy ch...   340   7e-94
AT1G72500.1 | Symbols:  | LOCATED IN: plasma membrane; EXPRESSED...   261   5e-70

>AT1G19110.1 | Symbols:  | inter-alpha-trypsin inhibitor heavy
           chain-related | chr1:6602270-6605766 FORWARD LENGTH=754
          Length = 754

 Score =  340 bits (871), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 164/275 (59%), Positives = 210/275 (76%), Gaps = 3/275 (1%)

Query: 1   MEEEFSNAVEEGLRLSKRVYFGNDRAVSPPKPPMAMIKSHTA--WLPTAPMLYARIHDPA 58
           M E+F+ AV++GL+L+KR+YFG DRAV+ P+PP  M +S T   +LPTAPM+YA I DP 
Sbjct: 1   MAEDFARAVDDGLKLAKRIYFGKDRAVAAPRPPAPMDRSSTTQPYLPTAPMVYAVIPDPG 60

Query: 59  IVDNPDVPSYQPHVHGRCDPPALIPLHMTAVNLRADCYLDHTAFLTLTASWRLHCVSGSR 118
           IVDNPD+PSYQPHVHGRCDPPALIPL M ++ L  DCYLD TA +T+T SWR+HCV GS+
Sbjct: 61  IVDNPDLPSYQPHVHGRCDPPALIPLQMNSIELDVDCYLD-TALVTVTGSWRVHCVMGSK 119

Query: 119 AADCLLALPMAAQGSILGVEVSVHRKSFSTQLVDMEDNNGKENVTRTQDGGFLKPDAFTL 178
             DC +A+PM  QGSILGVEV + RKS++TQL+  ED N  E     + GGFLKP+ FTL
Sbjct: 120 RCDCRIAIPMGEQGSILGVEVEIPRKSYTTQLITAEDGNEFEKTALPETGGFLKPNIFTL 179

Query: 179 TIPQIDGGSNLSVKISWSQKIQCSNDVFSLNVPFVFPDYVNPVGKRISKTEKIQINVNTV 238
           TIPQ+DGG+NLS+K++WSQK+  +   F L++PF FP+YV P  K+ISK EKI ++VN  
Sbjct: 180 TIPQVDGGTNLSIKMTWSQKLTYNQGQFFLDIPFNFPEYVTPAVKKISKREKIYLSVNAG 239

Query: 239 TGSEVLCNTTSHPLKEVRRNAGDIGFSYESNVLSW 273
           TG+EVLC   SH LKE  R+AG + F+YE++VL W
Sbjct: 240 TGTEVLCKGCSHQLKEKLRSAGKLRFAYEADVLKW 274


>AT1G72500.1 | Symbols:  | LOCATED IN: plasma membrane; EXPRESSED
           IN: 23 plant structures; EXPRESSED DURING: 13 growth
           stages; CONTAINS InterPro DOMAIN/s: von Willebrand
           factor, type A (InterPro:IPR002035); BEST Arabidopsis
           thaliana protein match is: inter-alpha-trypsin inhibitor
           heavy chain-related (TAIR:AT1G19110.1); Has 1407 Blast
           hits to 1406 proteins in 307 species: Archae - 6;
           Bacteria - 522; Metazoa - 484; Fungi - 59; Plants - 110;
           Viruses - 0; Other Eukaryotes - 226 (source: NCBI
           BLink). | chr1:27295336-27298556 REVERSE LENGTH=756
          Length = 756

 Score =  261 bits (666), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 130/276 (47%), Positives = 180/276 (65%), Gaps = 7/276 (2%)

Query: 1   MEEEFSNAVEEGLRLSKRVYFGNDRAVSPPKPPMAMIKSHTAWLPTAPMLYARIHDPAIV 60
           M EEF+  VE+GL+L++R+Y+G   A      P +  ++   +LPTA   YA I DP  V
Sbjct: 1   MSEEFALRVEQGLQLARRIYYGKGIAPPVVPDPPSSPEN---FLPTAITAYASITDPVAV 57

Query: 61  DNPDVPSYQPHVHGRCDPPALIPLHMTAVNLRADCYLDHTAFLTLTASWRLHCVSGSRAA 120
           DNPDVPSYQP+VH RCDP AL+PL M  + +  DC+LD TAF+T+T  WR+HCV  S+  
Sbjct: 58  DNPDVPSYQPYVHARCDPSALVPLQMLGIEMNIDCWLD-TAFVTVTGRWRVHCVRPSKRF 116

Query: 121 DCLLALPMAAQGSILGVEVSV--HRKSFSTQLVDMEDNNGKENVTRTQDGGFLKPDAFTL 178
           DC + +PM  +GS LG E+ V  + KS+ T+LV  ++ +  +NV + +D  F K   +T 
Sbjct: 117 DCCVGVPMGEKGSFLGAEIDVLNNEKSYQTKLVTEDETSDFDNVHKDKDSRFFKSHIYTF 176

Query: 179 TIPQIDGGSNLSVKISWSQKIQCSNDVFSLNVPFVFPDYVNPVGKRISKTEKIQINVNT- 237
            IP + GGS  SV ++WSQK+   +  F LNVPF FP YVNP+GK I K EKI +N+N+ 
Sbjct: 177 KIPHVAGGSIFSVNVTWSQKLIYKDGKFHLNVPFRFPSYVNPIGKEIIKREKIVLNMNSC 236

Query: 238 VTGSEVLCNTTSHPLKEVRRNAGDIGFSYESNVLSW 273
           V+G E+  + TSHPLK + R AG++   YE+ V SW
Sbjct: 237 VSGGEIASSFTSHPLKIIHRVAGELSCEYEAEVPSW 272