Miyakogusa Predicted Gene

Lj6g3v1177260.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1177260.1 tr|Q1YZ74|Q1YZ74_PHOPR Inter-alpha-trypsin
inhibitor domain protein OS=Photobacterium profundum
3TCK,33.52,1e-17,no description,NULL; vWA-like,NULL;
INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN,NULL; VON WILLEBRAND
F,CUFF.59197.1
         (184 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19110.1 | Symbols:  | inter-alpha-trypsin inhibitor heavy ch...   220   5e-58
AT1G72500.1 | Symbols:  | LOCATED IN: plasma membrane; EXPRESSED...   181   3e-46

>AT1G19110.1 | Symbols:  | inter-alpha-trypsin inhibitor heavy
           chain-related | chr1:6602270-6605766 FORWARD LENGTH=754
          Length = 754

 Score =  220 bits (560), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 106/184 (57%), Positives = 133/184 (72%)

Query: 1   MRGKLIEDTKNALSAALSKLDPEDSFSIIAFNGERYLFSTSMELASKDAVERAIEWININ 60
           M GK +ED KNA+S ALSKLDP DSF+II F+ +  LFSTSME  + DAVER IEW+N N
Sbjct: 339 MTGKPLEDVKNAISTALSKLDPGDSFNIITFSNDTALFSTSMESVTSDAVERGIEWMNKN 398

Query: 61  FVAGGDTNILQPLNKAMEMLSDARSSAPIIFLVTDGSVENERQICDMVKNHMINGKSTAP 120
           FV    TN+L PL KA+EMLS+ R S P+IF VTDGSVE+ER ICD++K H+ +  S  P
Sbjct: 399 FVVADGTNMLPPLEKAVEMLSNTRGSIPMIFFVTDGSVEDERHICDVMKKHLASAGSVFP 458

Query: 121 RIYTLGIGSFCNHYFLRMLAMISRGQHIAALDVDLVEPQMLKLFDKASSLVLANITMDIF 180
           RI+T G+G FCNHYFL+MLA IS GQH +  + D +E +M KLF KA S +L NI ++  
Sbjct: 459 RIHTFGLGVFCNHYFLQMLANISCGQHESVYNTDHIEERMDKLFTKALSTILVNIAIEPL 518

Query: 181 NDVD 184
             +D
Sbjct: 519 QSLD 522


>AT1G72500.1 | Symbols:  | LOCATED IN: plasma membrane; EXPRESSED
           IN: 23 plant structures; EXPRESSED DURING: 13 growth
           stages; CONTAINS InterPro DOMAIN/s: von Willebrand
           factor, type A (InterPro:IPR002035); BEST Arabidopsis
           thaliana protein match is: inter-alpha-trypsin inhibitor
           heavy chain-related (TAIR:AT1G19110.1); Has 1407 Blast
           hits to 1406 proteins in 307 species: Archae - 6;
           Bacteria - 522; Metazoa - 484; Fungi - 59; Plants - 110;
           Viruses - 0; Other Eukaryotes - 226 (source: NCBI
           BLink). | chr1:27295336-27298556 REVERSE LENGTH=756
          Length = 756

 Score =  181 bits (458), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 91/179 (50%), Positives = 119/179 (66%), Gaps = 1/179 (0%)

Query: 1   MRGKLIEDTKNALSAALSKLDPEDSFSIIAFNGERYLFSTSMELASKDAVERAIEWININ 60
           M+ K +ED K AL   L+KL  ED F+IIAFN E   FSTSME A+ + +    EW++ N
Sbjct: 337 MKWKPLEDVKKALLECLAKLQAEDVFNIIAFNDEILEFSTSMEFATDETISAVTEWLDSN 396

Query: 61  FVAGGDTNILQPLNKAMEMLSDARSSAPIIFLVTDGSVENERQICDMVKNHMI-NGKSTA 119
            +A G TN+L PL +AM++L  +    P+++LVTDGSVENER+IC  +K     NGKS +
Sbjct: 397 LIANGGTNMLLPLKQAMKLLEGSNIGVPLVYLVTDGSVENEREICHAMKESCSRNGKSIS 456

Query: 120 PRIYTLGIGSFCNHYFLRMLAMISRGQHIAALDVDLVEPQMLKLFDKASSLVLANITMD 178
           PRI T GIGSFCNHYFL+MLA I  G +    + D  E QM +LF+ ASS ++AN T D
Sbjct: 457 PRISTFGIGSFCNHYFLQMLARIGNGYYDGTNNTDSFEHQMSRLFEIASSTIVANTTFD 515