Miyakogusa Predicted Gene

Lj6g3v1177240.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1177240.2 Non Chatacterized Hit- tr|K4AIR7|K4AIR7_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si038779,46.26,2e-18,seg,NULL,CUFF.59196.2
         (143 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G23070.1 | Symbols:  | Protein of unknown function (DUF300) |...   130   2e-31
AT4G38360.2 | Symbols: LAZ1 | Protein of unknown function (DUF30...    68   2e-12
AT1G77220.1 | Symbols:  | Protein of unknown function (DUF300) |...    62   2e-10

>AT1G23070.1 | Symbols:  | Protein of unknown function (DUF300) |
           chr1:8174011-8175758 REVERSE LENGTH=403
          Length = 403

 Score =  130 bits (328), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/113 (58%), Positives = 85/113 (75%), Gaps = 7/113 (6%)

Query: 3   LVMQMAIAAIAHVFVFSAKPYYLLPAASACGKVTKETTEAAIAINEGDEQKPAALLKETT 62
           + ++MAIAA+AH+FVF A+PY+ +P  S CGK+T ET++  + + EG       L++ T 
Sbjct: 271 ICIEMAIAAVAHLFVFPAEPYHYIPV-SECGKITAETSKTEVKLEEG------GLVETTE 323

Query: 63  TEVEAPRTSVKESVQDIVVGGGQRVVNDVVLTINQAIGPVEKGVTRIQQTFHH 115
           T+VEA  TS+KESVQDIV+ GGQ VV DVVLTINQAIGPVEKGVT+IQ T H 
Sbjct: 324 TQVEASGTSIKESVQDIVIDGGQHVVKDVVLTINQAIGPVEKGVTKIQDTIHQ 376


>AT4G38360.2 | Symbols: LAZ1 | Protein of unknown function (DUF300)
           | chr4:17967389-17969798 FORWARD LENGTH=485
          Length = 485

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 10/119 (8%)

Query: 3   LVMQMAIAAIAHVFVFSAKPYYLLP-----AASACGKVTKETTEAAIAINE-GDEQKPAA 56
           + ++M IA++ H++VF AKPY L+      + S  G     + +  I  +E  D ++P  
Sbjct: 281 ICIEMGIASVVHLYVFPAKPYGLMGDRFTGSVSVLGDYA--SVDCPIDPDEIRDSERPTK 338

Query: 57  L-LKETTTEVEAPRTSVKESVQDIVVGGGQRVVNDVVLTINQAIGPVEKGVTRIQQTFH 114
           + L     ++ +  T +KES++D+ VGGG+ +V DV  T+ QA+ P+EK +T+  +  H
Sbjct: 339 VRLPHPDVDIRSGMT-IKESMRDVFVGGGEYIVKDVRFTVTQAVEPMEKSITKFNEKLH 396


>AT1G77220.1 | Symbols:  | Protein of unknown function (DUF300) |
           chr1:29013232-29015530 FORWARD LENGTH=484
          Length = 484

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 14/121 (11%)

Query: 3   LVMQMAIAAIAHVFVFSAKPYYLLPAASACGK-VTKETTEAAIAINEGDEQKPAALLKET 61
           + ++M IAA+ H++VF A PY        C + V   +  A+I +    E+   +   E 
Sbjct: 301 ICIEMGIAAVVHLYVFPAAPY---KRGERCVRNVAVMSDYASIDVPPDPEEVKDS---ER 354

Query: 62  TTEVEAPRTSVKE-------SVQDIVVGGGQRVVNDVVLTINQAIGPVEKGVTRIQQTFH 114
           TT     R   +E       SV+D+V+G G+ +V+D+  T++  + PVE+G+ +I +TFH
Sbjct: 355 TTRTRYGRHDDREKRLNFPQSVRDVVLGSGEIIVDDMRFTVSHVVEPVERGIAKINRTFH 414

Query: 115 H 115
            
Sbjct: 415 Q 415