Miyakogusa Predicted Gene
- Lj6g3v1176160.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1176160.1 Non Chatacterized Hit- tr|C0PFI1|C0PFI1_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,33.06,2e-18,CCT_2,CO/COL/TOC1, conserved site; tify,Tify;
seg,NULL; TIFY,Tify; no description,Tify,CUFF.59190.1
(257 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G19180.1 | Symbols: JAZ1, TIFY10A | jasmonate-zim-domain prot... 157 1e-38
AT1G74950.1 | Symbols: JAZ2, TIFY10B | TIFY domain/Divergent CCT... 140 1e-33
AT1G72450.1 | Symbols: JAZ6, TIFY11B | jasmonate-zim-domain prot... 115 2e-26
AT1G19180.2 | Symbols: TIFY10A | jasmonate-zim-domain protein 1 ... 107 8e-24
AT1G17380.1 | Symbols: JAZ5, TIFY11A | jasmonate-zim-domain prot... 105 2e-23
AT5G20900.1 | Symbols: JAZ12, TIFY3B | jasmonate-zim-domain prot... 65 6e-11
AT1G70700.2 | Symbols: TIFY7 | TIFY domain/Divergent CCT motif f... 61 6e-10
AT1G70700.1 | Symbols: JAZ9, TIFY7 | TIFY domain/Divergent CCT m... 56 3e-08
AT3G43440.1 | Symbols: JAZ11, TIFY3A | jasmonate-zim-domain prot... 52 3e-07
>AT1G19180.1 | Symbols: JAZ1, TIFY10A | jasmonate-zim-domain protein
1 | chr1:6622312-6623271 FORWARD LENGTH=253
Length = 253
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 140/249 (56%), Gaps = 31/249 (12%)
Query: 21 EKTTFSQTCSLLSQYIKEKGSFGDLTLGMTCNNTEQTGAPETSCQSATTMNLFPAKESNM 80
+K +FSQTCS LSQY+KE GSFGDL+LGM C + G S Q TTM+LFP + SNM
Sbjct: 19 KKPSFSQTCSRLSQYLKENGSFGDLSLGMACK-PDVNGTLGNSRQPTTTMSLFPCEASNM 77
Query: 81 TP--KNLTPMNLLSPQ--------EIP--TLINNSSAIKSVSKGAKASQLTIFYAGQVIV 128
+++ P NL Q +P ++ + +SV ++ + LTIFYAGQVIV
Sbjct: 78 DSMVQDVKPTNLFPRQPSFSSSSSSLPKEDVLKMTQTTRSVKPESQTAPLTIFYAGQVIV 137
Query: 129 LDDFPADKASELMSLATKXXXXXXXXXXXXXXXXFAPSLIRTSADSSAPVIPGVNIIPCT 188
+DF A+KA E+++LA+K A SL + D + + N +P
Sbjct: 138 FNDFSAEKAKEVINLASKGT---------------ANSLAKNQTDIRSNIATIANQVPHP 182
Query: 189 GTNSIPEHAQVSSRPIVCDLPIARKASLHRFLEKRKDRIAAKAPYEVTNLMGHANKPAES 248
+ E Q S P+ +LPIAR+ASLHRFLEKRKDR+ +KAPY++ + ++ P +
Sbjct: 183 RKTTTQEPIQSSPTPLT-ELPIARRASLHRFLEKRKDRVTSKAPYQLCDPAKASSNPQTT 241
Query: 249 --MSWLGFG 255
MSWLG
Sbjct: 242 GNMSWLGLA 250
>AT1G74950.1 | Symbols: JAZ2, TIFY10B | TIFY domain/Divergent CCT
motif family protein | chr1:28148919-28150258 REVERSE
LENGTH=249
Length = 249
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 130/251 (51%), Gaps = 33/251 (13%)
Query: 19 SPEKTTFSQTCSLLSQYIKEKGSFGDLTLGMTCNNTEQTGAPETSCQSATTMNLFPAKES 78
S K +FSQTC+ LS+Y+KEKGSFGDL+LGMTC G+ + T MNLFP + S
Sbjct: 12 SGRKPSFSQTCTRLSRYLKEKGSFGDLSLGMTCKPDVNGGS-----RQPTMMNLFPCEAS 66
Query: 79 NMT---------PKNLTPMNLLSP-------QEIPTLINNSSAIKSVSKGAKASQLTIFY 122
M PK + P +E +I ++ KSV ++++ LTIFY
Sbjct: 67 GMDSSAGQEDIKPKTMFPRQSSFSSSSSSGTKEDVQMIKETT--KSVKPESQSAPLTIFY 124
Query: 123 AGQVIVLDDFPADKASELMSLATKXXXXXXXXXXXXXXXXFAPSLIRTSADSSAPVIPGV 182
G+V+V DDF A+KA E++ LA K + + A S PV
Sbjct: 125 GGRVMVFDDFSAEKAKEVIDLANKGSAKSFTCFTAEVNNNHSAYSQKEIASSPNPV---- 180
Query: 183 NIIPCT-GTNSIPEHAQVSSRPIVCDLPIARKASLHRFLEKRKDRIAAKAPYEVTNLMGH 241
C+ + E Q + + C+LPIAR+ASLHRFLEKRKDRI +KAPY++
Sbjct: 181 ----CSPAKTAAQEPIQPNPASLACELPIARRASLHRFLEKRKDRITSKAPYQIDGSAEA 236
Query: 242 ANKPAESMSWL 252
++KP +WL
Sbjct: 237 SSKPTNP-AWL 246
>AT1G72450.1 | Symbols: JAZ6, TIFY11B | jasmonate-zim-domain protein
6 | chr1:27274336-27276136 REVERSE LENGTH=269
Length = 269
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 119/240 (49%), Gaps = 37/240 (15%)
Query: 15 AAAKSPEKTTFSQTCSLLSQYIKEKGSFGDLTLGMT-CNNTEQTGAPETSCQSATTMNLF 73
+ ++PEK+ FSQ CSLLS+Y+KEKGSFG++ +G+ ++ E G + Q N+
Sbjct: 2 STGQAPEKSNFSQRCSLLSRYLKEKGSFGNINMGLARKSDLELAGKFDLKGQ----QNVI 57
Query: 74 PAKESNMTPKNLTPMNLL---SPQEIPTLINNSSAIKSVSKGAKA------SQLTIFYAG 124
E++ T P L+ S E T + + +S+ AK SQLTIF+ G
Sbjct: 58 KKVETSET----RPFKLIQKFSIGEASTSTEDKAIYIDLSEPAKVAPESGNSQLTIFFGG 113
Query: 125 QVIVLDDFPADKASELMSLATKXXXXXXXXXXXXXXXXFAPSLIRTSADSSAPVIPGVNI 184
+V+V ++FP DKA E+M +A + S + D S VIP +N
Sbjct: 114 KVMVFNEFPEDKAKEIMEVAKEANHVAVDSKN---------SQSHMNLDKSNVVIPDLNE 164
Query: 185 IPCTGTNSIPE---HAQVSSRPIVCDLPIARKASLHRFLEKRKDRIAAKAPYEVTNLMGH 241
+G N E QV R IAR+ASLHRF KRKDR A+APY+V H
Sbjct: 165 PTSSGNNEDQETGQQHQVVER-------IARRASLHRFFAKRKDRAVARAPYQVNQHGSH 217
>AT1G19180.2 | Symbols: TIFY10A | jasmonate-zim-domain protein 1 |
chr1:6622708-6623271 FORWARD LENGTH=187
Length = 187
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 107/200 (53%), Gaps = 30/200 (15%)
Query: 70 MNLFPAKESNMTP--KNLTPMNLLSPQ--------EIP--TLINNSSAIKSVSKGAKASQ 117
M+LFP + SNM +++ P NL Q +P ++ + +SV ++ +
Sbjct: 1 MSLFPCEASNMDSMVQDVKPTNLFPRQPSFSSSSSSLPKEDVLKMTQTTRSVKPESQTAP 60
Query: 118 LTIFYAGQVIVLDDFPADKASELMSLATKXXXXXXXXXXXXXXXXFAPSLIRTSADSSAP 177
LTIFYAGQVIV +DF A+KA E+++LA+K A SL + D +
Sbjct: 61 LTIFYAGQVIVFNDFSAEKAKEVINLASKGT---------------ANSLAKNQTDIRSN 105
Query: 178 VIPGVNIIPCTGTNSIPEHAQVSSRPIVCDLPIARKASLHRFLEKRKDRIAAKAPYEVTN 237
+ N +P + E Q S P+ +LPIAR+ASLHRFLEKRKDR+ +KAPY++ +
Sbjct: 106 IATIANQVPHPRKTTTQEPIQSSPTPLT-ELPIARRASLHRFLEKRKDRVTSKAPYQLCD 164
Query: 238 LMGHANKPAES--MSWLGFG 255
++ P + MSWLG
Sbjct: 165 PAKASSNPQTTGNMSWLGLA 184
>AT1G17380.1 | Symbols: JAZ5, TIFY11A | jasmonate-zim-domain protein
5 | chr1:5955654-5957070 REVERSE LENGTH=274
Length = 274
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 115/235 (48%), Gaps = 29/235 (12%)
Query: 15 AAAKSPEKTTFSQTCSLLSQYIKEKGSFGDLTLGMTCNNTEQTGAPETSCQSATTMNLFP 74
A A++PEK+ F++ CSLLS+Y+KEKGSFG++ LG+ P++S P
Sbjct: 8 AKAQAPEKSDFTRRCSLLSRYLKEKGSFGNIDLGLYR-------KPDSSL-------ALP 53
Query: 75 AKESNMTPKNLTPMNLLSPQEIPTLINNSSAIKSVSKGAKA----SQLTIFYAGQVIVLD 130
K P M+ + ++ +K V+ +++ SQLTIF+ G+V+V +
Sbjct: 54 GKFD--PPGKQNAMHKAGHSKGEPSTSSGGKVKDVADLSESQPGSSQLTIFFGGKVLVYN 111
Query: 131 DFPADKASELMSLATKXXXXXXXXXXXXXXXXFAPSLIRTSADSSAPVIPGVNIIPCTGT 190
+FP DKA E+M +A + P + + S+ V+P +N T
Sbjct: 112 EFPVDKAKEIMEVAKQAKPVTEINIQ-------TPINDENNNNKSSMVLPDLN--EPTDN 162
Query: 191 NSIPEHAQVSSRPIVCDLPIARKASLHRFLEKRKDRIAAKAPYEVTNLMGHANKP 245
N + + Q IAR+ASLHRF KRKDR A+APY+V GH P
Sbjct: 163 NHLTKEQQQQQEQNQIVERIARRASLHRFFAKRKDRAVARAPYQVNQNAGHHRYP 217
>AT5G20900.1 | Symbols: JAZ12, TIFY3B | jasmonate-zim-domain protein
12 | chr5:7090883-7092201 FORWARD LENGTH=187
Length = 187
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 103 SSAIKSVSKGAKASQLTIFYAGQVIVLDDFPADKASELMSLATKXXXXXXXXXXXXXXX- 161
S+ I++ +QLTIF+ G V V D P++K E++ +A K
Sbjct: 43 STEIQTAEPTVPPNQLTIFFGGSVTVFDGLPSEKVQEILRIAAKAMETKNSTSISPVSSP 102
Query: 162 --XFAPSLIRTS--ADSSAPVIPGVNIIPCTGTNSIPEHAQVSSRPIVCDLPIARKASLH 217
APS TS A +A P I C T DLPIAR+ SL
Sbjct: 103 ALNRAPSFSSTSNVASPAAQPFPIQPISFCRST---------------ADLPIARRHSLQ 147
Query: 218 RFLEKRKDRIAAKAPYEVTNL 238
RFLEKR+DR+ K PY ++
Sbjct: 148 RFLEKRRDRLVNKNPYPTSDF 168
>AT1G70700.2 | Symbols: TIFY7 | TIFY domain/Divergent CCT motif
family protein | chr1:26654951-26656804 FORWARD
LENGTH=243
Length = 243
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 76/174 (43%), Gaps = 28/174 (16%)
Query: 66 SATTMNLFPAKESNMTPKNLTPMNLLSPQEIPTLINNSSAIKSVSKGAKASQLTIFYAGQ 125
S + N+F + +N TP+ L +PT + S + V+ + QLTIFY G
Sbjct: 71 SVSAANVFRRCQFGGAFQNATPLLLGGSVPLPT---HPSLVPRVASSGSSPQLTIFYGGT 127
Query: 126 VIVLDDFPADKASELMSLATKXXXXXXXXXXXXXXXXFAPSLIRTSADSSAPVIPGVNI- 184
+ V +D DKA +M A ++ S PV +
Sbjct: 128 ISVFNDISPDKAQAIMLCAGNG--------------------LKGETGDSKPVREAERMC 167
Query: 185 --IPCTGTN--SIPEHAQVSSRPIVCDLPIARKASLHRFLEKRKDRIAAKAPYE 234
P TN S+ E + R ++ +P ARKASL RFLEKRK+R+ + PY+
Sbjct: 168 RDTPVAATNAMSMIESFNAAPRNMIPSVPQARKASLARFLEKRKERLMSAMPYK 221
>AT1G70700.1 | Symbols: JAZ9, TIFY7 | TIFY domain/Divergent CCT
motif family protein | chr1:26654951-26656804 FORWARD
LENGTH=267
Length = 267
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 66 SATTMNLFPAKESNMTPKNLTPMNLLSPQEIPTLINNSSAIKSVSKGAKASQLTIFYAGQ 125
S + N+F + +N TP+ L +PT + S + V+ + QLTIFY G
Sbjct: 71 SVSAANVFRRCQFGGAFQNATPLLLGGSVPLPT---HPSLVPRVASSGSSPQLTIFYGGT 127
Query: 126 VIVLDDFPADKASELMSLATKXXXXXXXXXX--XXXXXXFAPSLIRTSADSSAPVIPGVN 183
+ V +D DKA +M A + + T+A SS+ N
Sbjct: 128 ISVFNDISPDKAQAIMLCAGNGLKGETGDSKPVREAERMYGKQIHNTAATSSSSATHTDN 187
Query: 184 IIPC-------TGTNSIPEHAQVSSRPIVCDLPIARKASLHRFLEKRKDRIAAKAPYE 234
C T S+ E + R ++ +P ARKASL RFLEKRK+R+ + PY+
Sbjct: 188 FSRCRDTPVAATNAMSMIESFNAAPRNMIPSVPQARKASLARFLEKRKERLMSAMPYK 245
>AT3G43440.1 | Symbols: JAZ11, TIFY3A | jasmonate-zim-domain protein
11 | chr3:15367670-15369774 FORWARD LENGTH=238
Length = 238
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 49/121 (40%), Gaps = 26/121 (21%)
Query: 116 SQLTIFYAGQVIVLDDFPADKASELMSLATKXXXXXXXXXXXXXXXXFAPSLIRTSADSS 175
SQLTI + G V D PA+K E++ +A P+L R + S+
Sbjct: 130 SQLTIIFGGSFSVFDGIPAEKVQEILHIA-----AAAKATETINLTSINPALKRAISFSN 184
Query: 176 APVIPGVNIIPCTGTNSIPEHAQVSSRPIVCDLPIARKASLHRFLEKRKDRIAAKAPYEV 235
A + + C T D+PIAR+ SL RF EKR+ R PY
Sbjct: 185 A------STVACVST---------------ADVPIARRRSLQRFFEKRRHRFVHTKPYSA 223
Query: 236 T 236
T
Sbjct: 224 T 224