Miyakogusa Predicted Gene

Lj6g3v1149670.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1149670.2 tr|G7IIR5|G7IIR5_MEDTR Fiber protein-like protein
OS=Medicago truncatula GN=MTR_2g044550 PE=4
SV=1,48.45,0.00000000000001,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.59171.2
         (457 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G43240.1 | Symbols:  | ARID/BRIGHT DNA-binding domain-contain...   520   e-148

>AT3G43240.1 | Symbols:  | ARID/BRIGHT DNA-binding domain-containing
           protein | chr3:15210032-15214440 REVERSE LENGTH=747
          Length = 747

 Score =  520 bits (1339), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 259/397 (65%), Positives = 310/397 (78%), Gaps = 8/397 (2%)

Query: 13  AITIYDDAVNMRFLVCGVPCTLDACLLGSLEDGLNALLCTEIRGFKLHNRTSAPPPPLQA 72
           +I IYD+ V +RFL+CG PCT+D  LLGSL DGLNALL  E+RG KLHNR+SAP PPLQA
Sbjct: 234 SIKIYDEDVTVRFLLCGPPCTVDTFLLGSLMDGLNALLRIEMRGSKLHNRSSAPAPPLQA 293

Query: 73  GTFSRGVVTMRCDISTCSSAHISLLVSGSADTCFNDQILENHIKKELIEKSQLVQAAPDH 132
           GTF+RGVVTMRCD+STCSSAHIS+LVSG+A TCF+DQ+LENHIK E++EK QLV +  + 
Sbjct: 294 GTFTRGVVTMRCDVSTCSSAHISMLVSGNAQTCFSDQLLENHIKHEVVEKIQLVHSVVNS 353

Query: 133 EQVKLPSSEPRRSASVACGSSVFEVCMRVPTWASQVLRQLAPNVSYRSLVMLGVASIQGL 192
           E+ K   SEPRRSAS+ACG+SV EV M+VPTWA QVLRQLAP+VSYRSLV+LGVASIQGL
Sbjct: 354 EETKRGFSEPRRSASIACGASVCEVSMQVPTWALQVLRQLAPDVSYRSLVVLGVASIQGL 413

Query: 193 AVASFNKDDAERLLFFSSKREKDKCPKEPVFSGNPSWLRPPAPSRKRSELCSRTKSINTS 252
           +VASF KDDAERLLFF  ++  D    + + S  P+WL PP P+RKRSE C  +K I   
Sbjct: 414 SVASFEKDDAERLLFFCGQQINDTSNHDALLSKIPNWLTPPLPTRKRSEPCRESKEI--- 470

Query: 253 SLKVEDIGSDRQKSNYAAMRPVPHSQRQKILPFSGLYEGERYNGDHGKSQQLPAPIKHHV 312
               E+ G   +K N AA+RP+PH++R K++PFSG  E  R++GDH K   LP P KH  
Sbjct: 471 ----ENGGPTSRKINVAALRPIPHTRRHKMIPFSGYSEIGRFDGDHTKG-SLPMPPKHGA 525

Query: 313 SGPNSVTHRKSVSNSFQASQIISLNPLPMKKHGCDRAPIRACSEEEFLRDVMQFLIHRGH 372
           SG   VTHRK+ S S+Q  QIISLNPLP+KKH C RA I+ CSEEEFLRDVMQFL+ RGH
Sbjct: 526 SGGTPVTHRKAFSGSYQRKQIISLNPLPLKKHDCGRAHIQVCSEEEFLRDVMQFLLIRGH 585

Query: 373 TRLIPQGGLAEFPEAILNAKRLDLFNLYREGGVKGRF 409
           TRL+P GGLAEFP+A+LN+KRLDLFNLYRE   +G F
Sbjct: 586 TRLVPPGGLAEFPDAVLNSKRLDLFNLYREVVSRGGF 622