Miyakogusa Predicted Gene

Lj6g3v1137460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1137460.1 tr|D6MKJ9|D6MKJ9_9ASPA Transcription factor
OS=Lycoris longituba PE=2 SV=1,41.67,0.00000000000001,seg,NULL; no
description,Tify; tify,Tify; CCT_2,CO/COL/TOC1, conserved site;
TIFY,Tify,CUFF.59132.1
         (201 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G20900.1 | Symbols: JAZ12, TIFY3B | jasmonate-zim-domain prot...    92   3e-19
AT3G43440.1 | Symbols: JAZ11, TIFY3A | jasmonate-zim-domain prot...    69   3e-12
AT3G43440.2 | Symbols: JAZ11 | jasmonate-zim-domain protein 11 |...    65   3e-11
AT1G19180.2 | Symbols: TIFY10A | jasmonate-zim-domain protein 1 ...    57   6e-09
AT1G19180.1 | Symbols: JAZ1, TIFY10A | jasmonate-zim-domain prot...    56   1e-08
AT1G74950.1 | Symbols: JAZ2, TIFY10B | TIFY domain/Divergent CCT...    56   1e-08
AT1G17380.1 | Symbols: JAZ5, TIFY11A | jasmonate-zim-domain prot...    49   2e-06

>AT5G20900.1 | Symbols: JAZ12, TIFY3B | jasmonate-zim-domain protein
           12 | chr5:7090883-7092201 FORWARD LENGTH=187
          Length = 187

 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/127 (42%), Positives = 74/127 (58%), Gaps = 7/127 (5%)

Query: 43  VIPNTSKVTIFYNGSVHIYDGIPADKVHEIMLIAAAAAKSVETKKIGMQXXXXXXXXXXX 102
           V PN  ++TIF+ GSV ++DG+P++KV EI+ IAA   K++ETK                
Sbjct: 53  VPPN--QLTIFFGGSVTVFDGLPSEKVQEILRIAA---KAMETKN-STSISPVSSPALNR 106

Query: 103 XXXHGTTNNIASTQELCFPAKKSSICR-LQEFPIARRHSLQSFLEQRRNRLGSKAPYSSS 161
                +T+N+AS     FP +  S CR   + PIARRHSLQ FLE+RR+RL +K PY +S
Sbjct: 107 APSFSSTSNVASPAAQPFPIQPISFCRSTADLPIARRHSLQRFLEKRRDRLVNKNPYPTS 166

Query: 162 STTKAAV 168
              K  V
Sbjct: 167 DFKKTDV 173


>AT3G43440.1 | Symbols: JAZ11, TIFY3A | jasmonate-zim-domain protein
           11 | chr3:15367670-15369774 FORWARD LENGTH=238
          Length = 238

 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 21/117 (17%)

Query: 48  SKVTIFYNGSVHIYDGIPADKVHEIMLIAAAAAKSVETKKIGMQXXXXXXXXXXXXXXHG 107
           S++TI + GS  ++DGIPA+KV EI+ I AAAAK+ ET  +                   
Sbjct: 130 SQLTIIFGGSFSVFDGIPAEKVQEILHI-AAAAKATETINL------------------- 169

Query: 108 TTNNIASTQELCFPAKKSSIC-RLQEFPIARRHSLQSFLEQRRNRLGSKAPYSSSST 163
           T+ N A  + + F    +  C    + PIARR SLQ F E+RR+R     PYS++++
Sbjct: 170 TSINPALKRAISFSNASTVACVSTADVPIARRRSLQRFFEKRRHRFVHTKPYSATTS 226



 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 29/105 (27%)

Query: 47  TSKVTIFYNGSVHIYDGIPADKVHEIMLIAAAAAKSVETKKIGMQXXXXXXXXXXXXXXH 106
           ++++TI + GS  +++G+PA KV EI+ IA A     +TK +                  
Sbjct: 43  STQLTIIFGGSCRVFNGVPAQKVQEIIRIAFAGK---QTKNV------------------ 81

Query: 107 GTTNNIASTQELCFPAKKSSICRLQEFPIARRHSLQSFLEQRRNR 151
            T  N A  + L F         + + PIARR SLQ FLE+RR+R
Sbjct: 82  -TGINPALNRALSFST-------VADLPIARRRSLQRFLEKRRDR 118


>AT3G43440.2 | Symbols: JAZ11 | jasmonate-zim-domain protein 11 |
           chr3:15367670-15369774 FORWARD LENGTH=152
          Length = 152

 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 21/118 (17%)

Query: 47  TSKVTIFYNGSVHIYDGIPADKVHEIMLIAAAAAKSVETKKIGMQXXXXXXXXXXXXXXH 106
           ++++TI + GS  +++G+PA KV EI+ I AAAAK+ ET  +                  
Sbjct: 43  STQLTIIFGGSCRVFNGVPAQKVQEILHI-AAAAKATETINL------------------ 83

Query: 107 GTTNNIASTQELCFPAKKSSIC-RLQEFPIARRHSLQSFLEQRRNRLGSKAPYSSSST 163
            T+ N A  + + F    +  C    + PIARR SLQ F E+RR+R     PYS++++
Sbjct: 84  -TSINPALKRAISFSNASTVACVSTADVPIARRRSLQRFFEKRRHRFVHTKPYSATTS 140


>AT1G19180.2 | Symbols: TIFY10A | jasmonate-zim-domain protein 1 |
           chr1:6622708-6623271 FORWARD LENGTH=187
          Length = 187

 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 17/158 (10%)

Query: 21  PHGDSVDGVATNKSVAASGLNAVIPNTSKVTIFYNGSVHIYDGIPADKVHEIMLIAA-AA 79
           P  D +    T +SV           T+ +TIFY G V +++   A+K  E++ +A+   
Sbjct: 38  PKEDVLKMTQTTRSVKPES------QTAPLTIFYAGQVIVFNDFSAEKAKEVINLASKGT 91

Query: 80  AKSVETKKIGMQXXXXXXXXXXXXXXHGTTNNIASTQELCFPAKKSSICRLQEFPIARRH 139
           A S+   +  ++                TT      QE      +SS   L E PIARR 
Sbjct: 92  ANSLAKNQTDIRSNIATIANQVPHPRKTTT------QEPI----QSSPTPLTELPIARRA 141

Query: 140 SLQSFLEQRRNRLGSKAPYSSSSTTKAAVADNIENNFS 177
           SL  FLE+R++R+ SKAPY      KA+       N S
Sbjct: 142 SLHRFLEKRKDRVTSKAPYQLCDPAKASSNPQTTGNMS 179


>AT1G19180.1 | Symbols: JAZ1, TIFY10A | jasmonate-zim-domain protein
           1 | chr1:6622312-6623271 FORWARD LENGTH=253
          Length = 253

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 17/158 (10%)

Query: 21  PHGDSVDGVATNKSVAASGLNAVIPNTSKVTIFYNGSVHIYDGIPADKVHEIMLIAA-AA 79
           P  D +    T +SV           T+ +TIFY G V +++   A+K  E++ +A+   
Sbjct: 104 PKEDVLKMTQTTRSVKPES------QTAPLTIFYAGQVIVFNDFSAEKAKEVINLASKGT 157

Query: 80  AKSVETKKIGMQXXXXXXXXXXXXXXHGTTNNIASTQELCFPAKKSSICRLQEFPIARRH 139
           A S+   +  ++                TT      QE      +SS   L E PIARR 
Sbjct: 158 ANSLAKNQTDIRSNIATIANQVPHPRKTTT------QE----PIQSSPTPLTELPIARRA 207

Query: 140 SLQSFLEQRRNRLGSKAPYSSSSTTKAAVADNIENNFS 177
           SL  FLE+R++R+ SKAPY      KA+       N S
Sbjct: 208 SLHRFLEKRKDRVTSKAPYQLCDPAKASSNPQTTGNMS 245


>AT1G74950.1 | Symbols: JAZ2, TIFY10B | TIFY domain/Divergent CCT
           motif family protein | chr1:28148919-28150258 REVERSE
           LENGTH=249
          Length = 249

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 18/118 (15%)

Query: 50  VTIFYNGSVHIYDGIPADKVHEIMLIA-AAAAKSVETKKIGMQXXXXXXXXXXXXXXHGT 108
           +TIFY G V ++D   A+K  E++ +A   +AKS                       +  
Sbjct: 120 LTIFYGGRVMVFDDFSAEKAKEVIDLANKGSAKSFTC---------FTAEVNNNHSAYSQ 170

Query: 109 TNNIASTQELCFPAKKSSICRLQ--------EFPIARRHSLQSFLEQRRNRLGSKAPY 158
               +S   +C PAK ++   +Q        E PIARR SL  FLE+R++R+ SKAPY
Sbjct: 171 KEIASSPNPVCSPAKTAAQEPIQPNPASLACELPIARRASLHRFLEKRKDRITSKAPY 228


>AT1G17380.1 | Symbols: JAZ5, TIFY11A | jasmonate-zim-domain protein
           5 | chr1:5955654-5957070 REVERSE LENGTH=274
          Length = 274

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 9/156 (5%)

Query: 7   KLEPEQQVSALESSPHGDSVDGVATNKSVA-ASGLNAVIPNTSKVTIFYNGSVHIYDGIP 65
           K +P  + +A+  + H       ++   V   + L+   P +S++TIF+ G V +Y+  P
Sbjct: 55  KFDPPGKQNAMHKAGHSKGEPSTSSGGKVKDVADLSESQPGSSQLTIFFGGKVLVYNEFP 114

Query: 66  ADKVHEIMLIAAAAAKSVETK---KIGMQXXXXXXXXXXXXXXHGTTNNIASTQELCFPA 122
            DK  EIM +A  A    E      I  +                T NN  + ++     
Sbjct: 115 VDKAKEIMEVAKQAKPVTEINIQTPINDENNNNKSSMVLPDLNEPTDNNHLTKEQQQQQE 174

Query: 123 KKSSICRLQEFPIARRHSLQSFLEQRRNRLGSKAPY 158
           +   + R     IARR SL  F  +R++R  ++APY
Sbjct: 175 QNQIVER-----IARRASLHRFFAKRKDRAVARAPY 205