Miyakogusa Predicted Gene
- Lj6g3v1106080.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1106080.1 Non Chatacterized Hit- tr|G7IJ02|G7IJ02_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,77.31,0,Tudor/PWWP/MBT,NULL; seg,NULL; ENT,EMSY N-terminal;
coiled-coil,NULL; FAMILY NOT NAMED,NULL,CUFF.59110.1
(369 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G13020.1 | Symbols: | Emsy N Terminus (ENT)/ plant Tudor-lik... 336 1e-92
AT2G44440.1 | Symbols: | Emsy N Terminus (ENT) domain-containin... 318 3e-87
AT3G12140.3 | Symbols: | Emsy N Terminus (ENT)/ plant Tudor-lik... 243 1e-64
AT3G12140.2 | Symbols: | Emsy N Terminus (ENT)/ plant Tudor-lik... 241 4e-64
AT3G12140.1 | Symbols: | Emsy N Terminus (ENT)/ plant Tudor-lik... 241 4e-64
AT5G06780.1 | Symbols: | Emsy N Terminus (ENT)/ plant Tudor-lik... 217 9e-57
AT5G06780.2 | Symbols: | Emsy N Terminus (ENT)/ plant Tudor-lik... 215 4e-56
AT5G20030.1 | Symbols: | Plant Tudor-like RNA-binding protein |... 51 1e-06
AT4G31880.2 | Symbols: | LOCATED IN: cytosol; EXPRESSED IN: 24 ... 49 6e-06
AT4G31880.1 | Symbols: | LOCATED IN: cytosol, chloroplast; EXPR... 49 6e-06
>AT5G13020.1 | Symbols: | Emsy N Terminus (ENT)/ plant Tudor-like
domains-containing protein | chr5:4129691-4132089
REVERSE LENGTH=397
Length = 397
Score = 336 bits (862), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 198/375 (52%), Positives = 237/375 (63%), Gaps = 32/375 (8%)
Query: 1 MDYEPYDSSGTDDDLPPTHQNRIPRGARLTGNGR-SAVGSISYPRMYGEIDMETQIHQLE 59
MDY P DSSGTDDDLPP+HQ R R AR TGNGR S + S R++ E METQIH +E
Sbjct: 1 MDYRPSDSSGTDDDLPPSHQGRYQRNARPTGNGRPSVLNSAPLSRVHNE--METQIHLIE 58
Query: 60 QEAYSSVLRAFKAQADAITWEKEILITDLRKELRLSNEEHRELLGRVNADDVIHRIREWR 119
QEAYSS+LRAFKAQ+DAITWEKE LIT+LRKELR+S+EEHRELL RVNAD++I RIREWR
Sbjct: 59 QEAYSSILRAFKAQSDAITWEKESLITELRKELRVSDEEHRELLSRVNADEMIRRIREWR 118
Query: 120 QTGGHQPGVLSTGLAIHDSIPSPTVSASRXXXXXXXXXXXXX------XXXXXXQPSSVA 173
+ Q V +HD+ PSP VS SR QPSS A
Sbjct: 119 KANSLQSSVPQL---VHDA-PSPAVSGSRKKQKTSQSIASLAMGPPSPSLHPSMQPSSSA 174
Query: 174 KRGSVPGSKGKKQKAGQVLTGVSSKKQYPLLGSGGRNQVPDRVTSGTVMAELAEGVASFD 233
R P K +K + QYP G GR Q +G + E E S+D
Sbjct: 175 LRRGGPPPGPKTKKPKTSM-------QYPSTGIAGRPQ------AGALTNEPGES-GSYD 220
Query: 234 SVIGRRVRTRWPDDNNFYEAVISDYNPIDGRHNLVYDMGRANETWEWVNLSEISPEDFQW 293
++GR+V T+WPDDN +YEAVI+DYNP++GRH LVYD+ ANETWEWVNL EISP D +W
Sbjct: 221 PLVGRKVWTKWPDDNQYYEAVITDYNPVEGRHALVYDINSANETWEWVNLKEISPGDIRW 280
Query: 294 VGEDPGINNHGGFGASGRGMNG-STGRDSVPGAGRGRGATKGQSRKNFLPSQNGIGKKAP 352
GEDPGI+ GG GRG + G + GRGRG+ + Q K +QNGIGKKA
Sbjct: 281 EGEDPGISRKGGHPGQGRGTKTMARGGPASNAGGRGRGSMRMQQPK----TQNGIGKKAL 336
Query: 353 DDIQILHTETLVKEV 367
+I+ILHTETL+KEV
Sbjct: 337 GEIEILHTETLLKEV 351
>AT2G44440.1 | Symbols: | Emsy N Terminus (ENT) domain-containing
protein | chr2:18336621-18338950 REVERSE LENGTH=429
Length = 429
Score = 318 bits (816), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 178/344 (51%), Positives = 218/344 (63%), Gaps = 25/344 (7%)
Query: 41 SYPRMYGEI--DMETQIHQLEQEAYSSVLRAFKAQADAITWEKEILITDLRKELRLSNEE 98
SYP+MY ++ DME QIHQ+E+EAY SVLRAFKAQ DAI+WEKE +IT+LRKEL LSNEE
Sbjct: 45 SYPKMYDDLAADMEAQIHQIEKEAYISVLRAFKAQGDAISWEKESVITELRKELSLSNEE 104
Query: 99 HRELLGRVNADDVIHRIREWRQTGGHQPGVLSTGLAIHDSIPSPTVSASRXXXXXXXXXX 158
HRELLGRVN+DD I RIREWRQ+GG QP + + +HD++PSP+VSAS
Sbjct: 105 HRELLGRVNSDDTIRRIREWRQSGGMQPSMRNAAQVVHDTLPSPSVSASMKTHKPNQPIP 164
Query: 159 XXXXXXXXXQ-----------PSSVAKRGSVPGSKGKKQKAGQVLTGVSSKKQYPLLGSG 207
SS AKRG VP KGKK K V G SS K P S
Sbjct: 165 SQPFASSSPSFHPQADPTHPFASSTAKRGPVPIVKGKKHKP--VFPGSSSTKHAPYHPSD 222
Query: 208 --GRNQVPDRVTSGTVMAELAEGVASFD--SVIGRRVRTRWPDDNNFYEAVISDYNPIDG 263
R QV +R+ S V A +E D S +GRRVRT+WP+DN FY+A+I+ YNP++G
Sbjct: 223 QPPRGQVMNRLPS--VPASSSEPTNGIDPESFLGRRVRTKWPEDNTFYDAIITQYNPVEG 280
Query: 264 RHNLVYDMGRANETWEWVNLSEISPEDFQWVGEDPGINNHGGFGASGRGMNGSTGRDSVP 323
RH LVYD+ +ETWEWV LSEISP D +W+GEDPG+ N + G G+N +TG + VP
Sbjct: 281 RHALVYDIATPSETWEWVRLSEISPGDIEWIGEDPGLGNR--YNGQGHGLNRTTGPNCVP 338
Query: 324 GAGRGRGATKGQSRKNFLPSQNGIGKKAPDDIQILHTETLVKEV 367
RG G K RK F SQNG GKK DI+I T+ L++EV
Sbjct: 339 --QRGSGLEKNTIRKGFRTSQNGTGKKKHLDIRIRQTDVLIREV 380
>AT3G12140.3 | Symbols: | Emsy N Terminus (ENT)/ plant Tudor-like
domains-containing protein | chr3:3869121-3870964
REVERSE LENGTH=383
Length = 383
Score = 243 bits (621), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 148/323 (45%), Positives = 193/323 (59%), Gaps = 60/323 (18%)
Query: 51 METQIHQLEQEAYSSVLRAFKAQADAITWEKEILITDLRKELRLSNEEHRELLGRVNADD 110
METQIHQLEQEAY++VLRAFKAQ+DAI+WEKE LIT+LRKELR+S++EHRELL RVN DD
Sbjct: 1 METQIHQLEQEAYTAVLRAFKAQSDAISWEKESLITELRKELRVSDDEHRELLSRVNKDD 60
Query: 111 VIHRIREWRQTGGHQPGVLSTGLAIHDSIPSPTVSASRXXXXXXXXXXXXXXXXXXXQPS 170
I RIR+WRQ G Q +T + D +PSPT SA+R
Sbjct: 61 TIQRIRDWRQGGASQITRHAT-IQPFDVLPSPTFSAAR---------------------- 97
Query: 171 SVAKRGSVPGSKGKKQKAGQVLTGVSSKKQYPLLGSGGRNQVPDRVTSGTVMAELAEGVA 230
KKQK + P +G+ G +R+ S + G
Sbjct: 98 -------------KKQK--------TFPSYNPSIGATGNRSFNNRLVSSGI-----SGNE 131
Query: 231 SFDSVIGRRVRTRWPDDNNFYEAVISDYNPIDGRHNLVYDMGRANETWEWVNLSEISPED 290
S +++IGR+V T+WP+DN+FYEA+I+ YN +GRH LVYD+ ANETWEWV+L EI PED
Sbjct: 132 SAEALIGRKVWTKWPEDNHFYEAIITQYNADEGRHALVYDIHAANETWEWVDLKEIPPED 191
Query: 291 FQWVGEDPGINNHGGFG-ASGRGMNGSTGRDSVPGAGRGRGATKGQSRKNFLP---SQNG 346
+W GE+ G+ + G G AS RG R + G GRGRG Q R+ +P QNG
Sbjct: 192 IRWDGEESGVALNIGHGSASFRG----NRRGQIHG-GRGRGPRIHQPRRELVPPPTQQNG 246
Query: 347 IG--KKAPDDIQILHTETLVKEV 367
G + + DDI++ +T++LVKEV
Sbjct: 247 SGGRRTSSDDIELFNTDSLVKEV 269
>AT3G12140.2 | Symbols: | Emsy N Terminus (ENT)/ plant Tudor-like
domains-containing protein | chr3:3868947-3870964
REVERSE LENGTH=327
Length = 327
Score = 241 bits (616), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 148/323 (45%), Positives = 192/323 (59%), Gaps = 60/323 (18%)
Query: 51 METQIHQLEQEAYSSVLRAFKAQADAITWEKEILITDLRKELRLSNEEHRELLGRVNADD 110
METQIHQLEQEAY++VLRAFKAQ+DAI+WEKE LIT+LRKELR+S++EHRELL RVN DD
Sbjct: 1 METQIHQLEQEAYTAVLRAFKAQSDAISWEKESLITELRKELRVSDDEHRELLSRVNKDD 60
Query: 111 VIHRIREWRQTGGHQPGVLSTGLAIHDSIPSPTVSASRXXXXXXXXXXXXXXXXXXXQPS 170
I RIR+WRQ G Q +T + D +PSPT SA+R
Sbjct: 61 TIQRIRDWRQGGASQITRHAT-IQPFDVLPSPTFSAAR---------------------- 97
Query: 171 SVAKRGSVPGSKGKKQKAGQVLTGVSSKKQYPLLGSGGRNQVPDRVTSGTVMAELAEGVA 230
KKQK P +G+ G +R+ S + G
Sbjct: 98 -------------KKQKTFPSYN--------PSIGATGNRSFNNRLVSSGI-----SGNE 131
Query: 231 SFDSVIGRRVRTRWPDDNNFYEAVISDYNPIDGRHNLVYDMGRANETWEWVNLSEISPED 290
S +++IGR+V T+WP+DN+FYEA+I+ YN +GRH LVYD+ ANETWEWV+L EI PED
Sbjct: 132 SAEALIGRKVWTKWPEDNHFYEAIITQYNADEGRHALVYDIHAANETWEWVDLKEIPPED 191
Query: 291 FQWVGEDPGINNHGGFG-ASGRGMNGSTGRDSVPGAGRGRGATKGQSRKNFLP---SQNG 346
+W GE+ G+ + G G AS RG R + G GRGRG Q R+ +P QNG
Sbjct: 192 IRWDGEESGVALNIGHGSASFRG----NRRGQIHG-GRGRGPRIHQPRRELVPPPTQQNG 246
Query: 347 IG--KKAPDDIQILHTETLVKEV 367
G + + DDI++ +T++LVKEV
Sbjct: 247 SGGRRTSSDDIELFNTDSLVKEV 269
>AT3G12140.1 | Symbols: | Emsy N Terminus (ENT)/ plant Tudor-like
domains-containing protein | chr3:3868947-3870964
REVERSE LENGTH=327
Length = 327
Score = 241 bits (616), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 148/323 (45%), Positives = 192/323 (59%), Gaps = 60/323 (18%)
Query: 51 METQIHQLEQEAYSSVLRAFKAQADAITWEKEILITDLRKELRLSNEEHRELLGRVNADD 110
METQIHQLEQEAY++VLRAFKAQ+DAI+WEKE LIT+LRKELR+S++EHRELL RVN DD
Sbjct: 1 METQIHQLEQEAYTAVLRAFKAQSDAISWEKESLITELRKELRVSDDEHRELLSRVNKDD 60
Query: 111 VIHRIREWRQTGGHQPGVLSTGLAIHDSIPSPTVSASRXXXXXXXXXXXXXXXXXXXQPS 170
I RIR+WRQ G Q +T + D +PSPT SA+R
Sbjct: 61 TIQRIRDWRQGGASQITRHAT-IQPFDVLPSPTFSAAR---------------------- 97
Query: 171 SVAKRGSVPGSKGKKQKAGQVLTGVSSKKQYPLLGSGGRNQVPDRVTSGTVMAELAEGVA 230
KKQK P +G+ G +R+ S + G
Sbjct: 98 -------------KKQKTFPSYN--------PSIGATGNRSFNNRLVSSGI-----SGNE 131
Query: 231 SFDSVIGRRVRTRWPDDNNFYEAVISDYNPIDGRHNLVYDMGRANETWEWVNLSEISPED 290
S +++IGR+V T+WP+DN+FYEA+I+ YN +GRH LVYD+ ANETWEWV+L EI PED
Sbjct: 132 SAEALIGRKVWTKWPEDNHFYEAIITQYNADEGRHALVYDIHAANETWEWVDLKEIPPED 191
Query: 291 FQWVGEDPGINNHGGFG-ASGRGMNGSTGRDSVPGAGRGRGATKGQSRKNFLP---SQNG 346
+W GE+ G+ + G G AS RG R + G GRGRG Q R+ +P QNG
Sbjct: 192 IRWDGEESGVALNIGHGSASFRG----NRRGQIHG-GRGRGPRIHQPRRELVPPPTQQNG 246
Query: 347 IG--KKAPDDIQILHTETLVKEV 367
G + + DDI++ +T++LVKEV
Sbjct: 247 SGGRRTSSDDIELFNTDSLVKEV 269
>AT5G06780.1 | Symbols: | Emsy N Terminus (ENT)/ plant Tudor-like
domains-containing protein | chr5:2094147-2096377
REVERSE LENGTH=320
Length = 320
Score = 217 bits (553), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 135/320 (42%), Positives = 185/320 (57%), Gaps = 64/320 (20%)
Query: 49 IDMETQIHQLEQEAYSSVLRAFKAQADAITWEKEILITDLRKELRLSNEEHRELLGRVNA 108
I+ME QIH LEQEAYS+VLRAF+AQAD +W+K ++T+LRKELR+S++E+R+LL V+
Sbjct: 6 INMEAQIHILEQEAYSAVLRAFQAQADEFSWDKATVMTNLRKELRISDDENRQLLNNVHN 65
Query: 109 DDVIHRIREWRQTGGHQPGVLSTGLAIHDSIPSPTVSASRXXXXXXXXXXXXXXXXXXXQ 168
DD+I RIR+ R GG+Q V L +H PSPT SASR
Sbjct: 66 DDLIKRIRDSRPRGGNQV-VRHQSLDVH---PSPTFSASR-------------------- 101
Query: 169 PSSVAKRGSVPGSKGKKQKAGQVLTGVSSKKQYPLLGSGGRNQVPDRVTSGTVMAELAEG 228
KKQK Q YP +GS +RV S AE
Sbjct: 102 ---------------KKQKTFQ---------SYPSIGSTRSKSFNNRVVSANEPAE---- 133
Query: 229 VASFDSVIGRRVRTRWPDDNNFYEAVISDYNPIDGRHNLVYDMGRANETWEWVNLSEISP 288
++IGR+V T+WP+DN+FYEAV++ YN +GRH LVYD+ NETWEWV+L+EI
Sbjct: 134 -----ALIGRKVWTKWPEDNSFYEAVVTQYNANEGRHALVYDINTVNETWEWVDLNEIPT 188
Query: 289 EDFQWVGEDPGIN-NHGGFGASGRGMNGSTGRDSVPGAGRGRGATKGQSRKNFLPSQNGI 347
+D +W GE+ G+ N G G + RG R ++ GRGRG + Q R+ L ++NG
Sbjct: 189 KDIRWDGEEDGVTLNVGHGGGTTRG-----NRRTLSHGGRGRGP-RTQPRREHLATENGG 242
Query: 348 GKKAPDDIQILHTETLVKEV 367
G+K +I++ +T++LVKEV
Sbjct: 243 GRKFFGEIELFNTDSLVKEV 262
>AT5G06780.2 | Symbols: | Emsy N Terminus (ENT)/ plant Tudor-like
domains-containing protein | chr5:2094147-2096356
REVERSE LENGTH=313
Length = 313
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 134/318 (42%), Positives = 183/318 (57%), Gaps = 64/318 (20%)
Query: 51 METQIHQLEQEAYSSVLRAFKAQADAITWEKEILITDLRKELRLSNEEHRELLGRVNADD 110
ME QIH LEQEAYS+VLRAF+AQAD +W+K ++T+LRKELR+S++E+R+LL V+ DD
Sbjct: 1 MEAQIHILEQEAYSAVLRAFQAQADEFSWDKATVMTNLRKELRISDDENRQLLNNVHNDD 60
Query: 111 VIHRIREWRQTGGHQPGVLSTGLAIHDSIPSPTVSASRXXXXXXXXXXXXXXXXXXXQPS 170
+I RIR+ R GG+Q V L +H PSPT SASR
Sbjct: 61 LIKRIRDSRPRGGNQV-VRHQSLDVH---PSPTFSASR---------------------- 94
Query: 171 SVAKRGSVPGSKGKKQKAGQVLTGVSSKKQYPLLGSGGRNQVPDRVTSGTVMAELAEGVA 230
KKQK Q YP +GS +RV S AE
Sbjct: 95 -------------KKQKTFQ---------SYPSIGSTRSKSFNNRVVSANEPAE------ 126
Query: 231 SFDSVIGRRVRTRWPDDNNFYEAVISDYNPIDGRHNLVYDMGRANETWEWVNLSEISPED 290
++IGR+V T+WP+DN+FYEAV++ YN +GRH LVYD+ NETWEWV+L+EI +D
Sbjct: 127 ---ALIGRKVWTKWPEDNSFYEAVVTQYNANEGRHALVYDINTVNETWEWVDLNEIPTKD 183
Query: 291 FQWVGEDPGIN-NHGGFGASGRGMNGSTGRDSVPGAGRGRGATKGQSRKNFLPSQNGIGK 349
+W GE+ G+ N G G + RG R ++ GRGRG + Q R+ L ++NG G+
Sbjct: 184 IRWDGEEDGVTLNVGHGGGTTRG-----NRRTLSHGGRGRGP-RTQPRREHLATENGGGR 237
Query: 350 KAPDDIQILHTETLVKEV 367
K +I++ +T++LVKEV
Sbjct: 238 KFFGEIELFNTDSLVKEV 255
>AT5G20030.1 | Symbols: | Plant Tudor-like RNA-binding protein |
chr5:6764971-6766036 REVERSE LENGTH=326
Length = 326
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 55 IHQLEQEAYSSVLRAFKAQADAITWEKEILITDLRKELRLSNEEHRELLGRVNADD 110
+H+LE +AY S + A ITWE+E IT+LR +L +SNEEH + + +DD
Sbjct: 265 VHRLELDAYRSSIERLHASGPIITWEQETWITNLRLKLNISNEEHLMQIRNLISDD 320
>AT4G31880.2 | Symbols: | LOCATED IN: cytosol; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages;
BEST Arabidopsis thaliana protein match is:
Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1). |
chr4:15419435-15423939 REVERSE LENGTH=872
Length = 872
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 10/136 (7%)
Query: 225 LAEGVASFDSVIGRRVRTRWPDDNNFYEAVISDYNPIDGRHNLVYDMGR------ANETW 278
L +G AS +S++G R++ WP D +Y+ V+ Y+ +H ++YD G N+ W
Sbjct: 597 LGQGKASGESLVGSRIKVWWPMDQAYYKGVVESYDAAKKKHLVIYDDGDQEILYLKNQKW 656
Query: 279 EWVNLSEISPEDFQWVGEDPGINNHGGFGASGRGMNGSTGRDSVPGAGRGRGATKGQSRK 338
++ SE+S +D + + + + + G + A +G GA G S+
Sbjct: 657 SPLDESELS-QDEEAADQTGQEEDASTVPLTKKAKTGKQSKMDNSSAKKGSGA--GSSKA 713
Query: 339 NFLPSQNGIGKKAPDD 354
P+ K + DD
Sbjct: 714 KATPASKS-SKTSQDD 728
>AT4G31880.1 | Symbols: | LOCATED IN: cytosol, chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14
growth stages; BEST Arabidopsis thaliana protein match
is: Tudor/PWWP/MBT superfamily protein
(TAIR:AT1G15940.1); Has 137162 Blast hits to 70781
proteins in 2973 species: Archae - 289; Bacteria -
24182; Metazoa - 56725; Fungi - 20130; Plants - 6559;
Viruses - 758; Other Eukaryotes - 28519 (source: NCBI
BLink). | chr4:15419435-15423939 REVERSE LENGTH=873
Length = 873
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 10/136 (7%)
Query: 225 LAEGVASFDSVIGRRVRTRWPDDNNFYEAVISDYNPIDGRHNLVYDMGR------ANETW 278
L +G AS +S++G R++ WP D +Y+ V+ Y+ +H ++YD G N+ W
Sbjct: 598 LGQGKASGESLVGSRIKVWWPMDQAYYKGVVESYDAAKKKHLVIYDDGDQEILYLKNQKW 657
Query: 279 EWVNLSEISPEDFQWVGEDPGINNHGGFGASGRGMNGSTGRDSVPGAGRGRGATKGQSRK 338
++ SE+S +D + + + + + G + A +G GA G S+
Sbjct: 658 SPLDESELS-QDEEAADQTGQEEDASTVPLTKKAKTGKQSKMDNSSAKKGSGA--GSSKA 714
Query: 339 NFLPSQNGIGKKAPDD 354
P+ K + DD
Sbjct: 715 KATPASKS-SKTSQDD 729