Miyakogusa Predicted Gene
- Lj6g3v1093620.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1093620.1 Non Chatacterized Hit- tr|K3XVW4|K3XVW4_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si006072,25.27,1e-17,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; no description,Tetratricopeptide-like
,CUFF.59085.1
(639 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 694 0.0
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 379 e-105
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 350 2e-96
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 350 2e-96
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 4e-94
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 342 7e-94
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 341 9e-94
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 338 7e-93
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 2e-92
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 336 3e-92
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 333 2e-91
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 331 8e-91
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 331 1e-90
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 330 3e-90
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 3e-90
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 328 7e-90
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 327 1e-89
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 1e-89
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 3e-89
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 3e-89
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 4e-88
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 4e-88
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 3e-87
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 319 4e-87
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 318 6e-87
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 316 4e-86
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 314 1e-85
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 312 4e-85
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 5e-85
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 1e-84
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 310 2e-84
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 308 7e-84
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 306 2e-83
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 305 5e-83
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 305 6e-83
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 7e-83
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 305 1e-82
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 3e-82
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 302 6e-82
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 301 6e-82
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 1e-81
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 3e-81
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 7e-81
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 298 9e-81
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 1e-80
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 1e-80
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 2e-80
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 2e-80
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 3e-80
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 296 3e-80
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 296 3e-80
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 5e-80
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 5e-80
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 294 1e-79
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 2e-79
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 7e-79
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 7e-79
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 1e-78
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 1e-78
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 3e-78
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 4e-78
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 5e-78
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 9e-78
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 1e-77
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 1e-77
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 4e-77
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 4e-77
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 285 7e-77
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 8e-77
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 285 9e-77
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 283 3e-76
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 6e-76
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 6e-76
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 9e-76
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 4e-75
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 2e-74
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 7e-74
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 8e-74
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 2e-73
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 3e-73
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 3e-73
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 4e-73
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 7e-73
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 7e-73
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 7e-73
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 1e-72
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 6e-72
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 7e-72
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 7e-72
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 266 3e-71
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 4e-71
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 5e-71
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 7e-71
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 2e-70
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 264 2e-70
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 263 4e-70
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 5e-70
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 5e-69
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 1e-68
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 1e-68
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 257 2e-68
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 257 2e-68
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 2e-68
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 4e-68
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 4e-68
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 255 5e-68
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 6e-68
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 4e-67
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 5e-67
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 251 1e-66
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 2e-66
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 250 2e-66
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 250 2e-66
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 249 4e-66
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 4e-66
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 248 7e-66
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 248 9e-66
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 248 1e-65
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 4e-65
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 5e-65
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 245 6e-65
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 4e-64
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 5e-64
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 6e-64
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 6e-64
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 6e-64
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 8e-64
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 8e-64
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 241 1e-63
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 1e-63
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 2e-63
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 8e-63
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 3e-62
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 235 6e-62
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 2e-61
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 4e-61
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 2e-60
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 229 5e-60
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 6e-60
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 6e-60
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 226 4e-59
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 225 7e-59
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 2e-58
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 4e-58
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 6e-58
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 222 8e-58
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 217 2e-56
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 3e-56
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 6e-56
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 7e-56
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 7e-55
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 5e-54
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 5e-53
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 2e-51
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 199 4e-51
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 198 9e-51
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 2e-45
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 4e-45
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 6e-42
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 1e-38
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 126 5e-29
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 7e-28
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 8e-27
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 9e-27
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 115 1e-25
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 113 5e-25
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 9e-25
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 112 1e-24
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 110 4e-24
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 7e-24
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 108 9e-24
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 9e-24
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 5e-22
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 7e-22
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 6e-21
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 99 8e-21
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 1e-20
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 8e-20
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 9e-20
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 94 4e-19
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 7e-18
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 9e-16
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 82 1e-15
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 80 3e-15
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 79 1e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 77 4e-14
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 6e-14
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 9e-14
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 75 1e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 75 1e-13
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 74 2e-13
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 70 4e-12
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 68 2e-11
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 67 3e-11
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 64 4e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 63 6e-10
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 62 1e-09
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 59 8e-09
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 59 9e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 59 9e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 59 1e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 1e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 58 2e-08
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 54 4e-07
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 5e-06
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/583 (56%), Positives = 425/583 (72%), Gaps = 3/583 (0%)
Query: 28 ASSTDSEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLH 87
A + S IL+ CK G L +A+ +LN++ ++ P P LYASLLQTC K SF+HG H
Sbjct: 26 APTKQSRILELCKLGQLTEAIRILNSTHSSEIP-ATPKLYASLLQTCNKVFSFIHGIQFH 84
Query: 88 AHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRP 147
AH +KSG+ +DR VGNSLL+LY KLGP + + + +FD V+D I+WTS++S Y
Sbjct: 85 AHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEH 144
Query: 148 INSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSAL 207
+ +L++F +M+ ++ N FT+SS + A S+L ++ LG C H +VI+ GF N ISS L
Sbjct: 145 VKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTL 204
Query: 208 VDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVP 267
+YG NR DA ++FDE PEP DV+ WTA++S ++ND++ EAL LF AMHRG GLVP
Sbjct: 205 AYLYGVNREPVDARRVFDEMPEP-DVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVP 263
Query: 268 DGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVF 327
DG TFGT+L AC NL L+QGKE+H K++ GI NVVVESSLLDMYGKCG V +AR VF
Sbjct: 264 DGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVF 323
Query: 328 DRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKE 387
+ + KNSVSW+A+L YCQN E+E E+ RE DLY FGTVL+AC+G+AAV LGKE
Sbjct: 324 NGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKE 383
Query: 388 VHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGR 447
+H QYVR+G + +VIVESAL+DLY K GC+D A R++ M +RN ITWNAM+ LAQNGR
Sbjct: 384 IHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGR 443
Query: 448 GTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYN 507
G E + F DM+K+G++PDYI+FI +L AC HTG+VDEGR YF LM YGIKPG EHY+
Sbjct: 444 GEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYS 503
Query: 508 CMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYV-TAERVARKMIELEP 566
CMIDLLGRA + EEAE+LLE A+CR D SLW VLLG C +D AER+A++M+ELEP
Sbjct: 504 CMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEP 563
Query: 567 DFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
+H+SYVLL N+Y+A+GR DA+ IRKLM RGV K G+SWI
Sbjct: 564 KYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWI 606
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/561 (38%), Positives = 329/561 (58%), Gaps = 9/561 (1%)
Query: 59 DPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQ 118
D V + +L T K S G +H ALK G+ V NSL+ +Y KL
Sbjct: 310 DVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKL-RKFGF 368
Query: 119 AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASK 178
A+T+FD+++ RD+I+W S+I+ + G + ++ LF Q+L ++P+ +T++SV+ AAS
Sbjct: 369 ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS 428
Query: 179 LRD-LALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWT 237
L + L+L +H I S++ +S+AL+D Y RNR +++A LF+ D+V W
Sbjct: 429 LPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER--HNFDLVAWN 486
Query: 238 AIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVG 297
A+++ T++ + L+LF MH+ G D FT T+ C L + QGK++HA +
Sbjct: 487 AMMAGYTQSHDGHKTLKLFALMHKQ-GERSDDFTLATVFKTCGFLFAINQGKQVHAYAIK 545
Query: 298 LGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEA---V 354
G ++ V S +LDMY KCG + A+ FD + + V+WT M+S +N E E V
Sbjct: 546 SGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHV 605
Query: 355 FELVRERGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAK 413
F +R GV D + T+ +A S + A+ G+++H ++ D V ++LVD+YAK
Sbjct: 606 FSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAK 665
Query: 414 CGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGV 473
CG +D A LF +E+ N WNAM+ GLAQ+G G E L+LF+ M G++PD +TFIGV
Sbjct: 666 CGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGV 725
Query: 474 LFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRY 533
L ACSH+GLV E ++ M +YGIKP +EHY+C+ D LGRA ++++AE+L+E+
Sbjct: 726 LSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEA 785
Query: 534 DHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRK 593
S++ LL AC D T +RVA K++ELEP +YVLL N+Y A +W++ R
Sbjct: 786 SASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLART 845
Query: 594 LMEDRGVKKLPGKSWIGSENQ 614
+M+ VKK PG SWI +N+
Sbjct: 846 MMKGHKVKKDPGFSWIEVKNK 866
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 197/373 (52%), Gaps = 8/373 (2%)
Query: 124 DSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLA 183
D+ +V +II +S Y +G+ L+ F+ M++ D+E + T ++ A K+ LA
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 184 LGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTL 243
LG +H M + G +S++L++MY + R A +FD E D++ W ++I+ +
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE-RDLISWNSVIAGI 391
Query: 244 TRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLG-WLRQGKELHAKVVGLGICG 302
+N + EA+ LF+ + R CGL PD +T ++L A ++L L K++H + +
Sbjct: 392 AQNGLEVEAVCLFMQLLR-CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVS 450
Query: 303 NVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYE---AVFELVR 359
+ V ++L+D Y + + +A ++F+R + + V+W AM++ Y Q+ + +F L+
Sbjct: 451 DSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMH 509
Query: 360 ERGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
++G SD + TV + C + A+ GK+VH ++ G D+ V S ++D+Y KCG +
Sbjct: 510 KQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMS 569
Query: 419 FAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACS 478
AQ F S+ V + + W MI G +NG +F M G+ PD T + A S
Sbjct: 570 AAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASS 629
Query: 479 HTGLVDEGRRYFA 491
+++GR+ A
Sbjct: 630 CLTALEQGRQIHA 642
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 211/472 (44%), Gaps = 69/472 (14%)
Query: 44 LRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGN 103
LRQ ++ TS+ TL P +L+ C + + H +A K G+ D FV
Sbjct: 136 LRQ--DVVYTSRMTLSP---------MLKLCLHSGYVWASESFHGYACKIGLDGDEFVAG 184
Query: 104 SLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDME 163
+L+ +YLK G + + + LF+ + RD++ W ++ AY G ++ L S +
Sbjct: 185 ALVNIYLKFGK-VKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLN 243
Query: 164 PNAFT------ISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAV 217
PN T IS + A +++ A N +S++ ++ RN+ +
Sbjct: 244 PNEITLRLLARISGDDSDAGQVKSFA----------------NGNDASSVSEIIFRNKGL 287
Query: 218 RDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLA 277
+ L + + L+ F M + D TF +LA
Sbjct: 288 SEYL-----------------------HSGQYSALLKCFADMVES-DVECDQVTFILMLA 323
Query: 278 ACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVS 337
+ L G+++H + LG+ + V +SL++MY K K G AR VFD + +++ +S
Sbjct: 324 TAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLIS 383
Query: 338 WTAMLSAYCQNK-EYEAV---FELVRERGVSDLYAFGTVLRACSGVA-AVMLGKEVHCQY 392
W ++++ QN E EAV +L+R D Y +VL+A S + + L K+VH
Sbjct: 384 WNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHA 443
Query: 393 VRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVL 452
++ D V +AL+D Y++ C+ A+ LF + + WNAM+ G Q+ G + L
Sbjct: 444 IKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTL 502
Query: 453 ELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVE 504
+LF M K+G D T V C +++G++ V Y IK G +
Sbjct: 503 KLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQ-----VHAYAIKSGYD 549
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 136/528 (25%), Positives = 231/528 (43%), Gaps = 71/528 (13%)
Query: 70 LLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVR 129
L+ +S + G HA L + +RF+ N+L+++Y K G L A+ +FD + R
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGS-LTYARRVFDKMPDR 103
Query: 130 DIIAWTSLISAYTRAGR-PINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACL 188
D+++W S+++AY ++ + ++Q + + + +T ++ KL CL
Sbjct: 104 DLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKL-------CL 156
Query: 189 HAMVI--SRGFH---------SNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWT 237
H+ + S FH + ++ ALV++Y + V++ LF+E P DVV W
Sbjct: 157 HSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY-RDVVLWN 215
Query: 238 AIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVG 297
++ EA+ L A H GL P+ T LLA + G + A V
Sbjct: 216 LMLKAYLEMGFKEEAIDLSSAFHSS-GLNPNEITL-RLLARIS-------GDDSDAGQVK 266
Query: 298 LGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVF-- 355
GN S ++F G LS Y + +Y A+
Sbjct: 267 SFANGNDASSVS--------------EIIFRNKG----------LSEYLHSGQYSALLKC 302
Query: 356 --ELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAK 413
++V D F +L V ++ LG++VHC ++ G + V ++L+++Y K
Sbjct: 303 FADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCK 362
Query: 414 CGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGV 473
FA+ +F +M R+ I+WN++I G+AQNG E + LF +++ G++PD T V
Sbjct: 363 LRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSV 422
Query: 474 LFACSHTGLVDEGRRYFALMVDEYGIKPGVEH----YNCMIDLLGRAEMIEEAESLLENA 529
L A S + EG + V + IK +ID R ++EAE L E
Sbjct: 423 LKAASS---LPEGLS-LSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH 478
Query: 530 DCRYDHSLWAVLLGACTKCSD-YVTAERVA--RKMIELEPDFHLSYVL 574
+ +D W ++ T+ D + T + A K E DF L+ V
Sbjct: 479 N--FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVF 524
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/617 (34%), Positives = 331/617 (53%), Gaps = 77/617 (12%)
Query: 67 YASLLQTCTKTS-SFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGP---------HL 116
+A LL +C K+ S ++ +HA +KSG ++ F+ N L+ Y K G +
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 117 PQ---------------------AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFS 155
PQ A +LF S+ RD W S++S + + R +L F+
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 156 QMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNR 215
M N ++ +SV++A S L D+ G +H+++ F S+ I SALVDMY +
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG 201
Query: 216 AVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTL 275
V DA ++FDE + +VV W ++I+ +N EAL +F M + PD T ++
Sbjct: 202 NVNDAQRVFDEMGD-RNVVSWNSLITCFEQNGPAVEALDVFQMMLES-RVEPDEVTLASV 259
Query: 276 LAACANLGWLRQGKELHAKVV-GLGICGNVVVESSLLDMYGKCGKVGQARVVFD------ 328
++ACA+L ++ G+E+H +VV + ++++ ++ +DMY KC ++ +AR +FD
Sbjct: 260 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319
Query: 329 -------------------------RLGDKNSVSWTAMLSAYCQNKEYEAVFELV----R 359
++ ++N VSW A+++ Y QN E E L R
Sbjct: 320 VIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR 379
Query: 360 ERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR-------DVIVESALVDLYA 412
E Y+F +L+AC+ +A + LG + H +V K G++ D+ V ++L+D+Y
Sbjct: 380 ESVCPTHYSFANILKACADLAELHLGMQAHV-HVLKHGFKFQSGEEDDIFVGNSLIDMYV 438
Query: 413 KCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIG 472
KCGCV+ +F M R+ ++WNAMI G AQNG G E LELF +M++ G +PD+IT IG
Sbjct: 439 KCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 498
Query: 473 VLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCR 532
VL AC H G V+EGR YF+ M ++G+ P +HY CM+DLLGRA +EEA+S++E +
Sbjct: 499 VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ 558
Query: 533 YDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIR 592
D +W LL AC + + VA K++E+EP YVLL N+Y +G+W D M +R
Sbjct: 559 PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 618
Query: 593 KLMEDRGVKKLPGKSWI 609
K M GV K PG SWI
Sbjct: 619 KSMRKEGVTKQPGCSWI 635
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 350 bits (897), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 199/589 (33%), Positives = 332/589 (56%), Gaps = 27/589 (4%)
Query: 51 LNTSQTTLDPNLKPVLYA--SLLQTCTK---TSSFLHGTTLHAHALKSGIHSDRFVGNSL 105
L + LD N++P + S++ C+ + G +HA+ L+ G + F+ N+L
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTL 242
Query: 106 LTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPN 165
+ +Y KLG L ++ L S RD++ W +++S+ + + + +L+ +M+ +EP+
Sbjct: 243 VAMYGKLG-KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301
Query: 166 AFTISSVITAASKLRDLALGACLHAMVISRG-FHSNTVISSALVDMYGRNRAVRDALKLF 224
FTISSV+ A S L L G LHA + G N+ + SALVDMY + V ++F
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF 361
Query: 225 DESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGW 284
D + + W A+I+ ++N+ +EAL LF+ M GL+ + T ++ AC G
Sbjct: 362 DGMFD-RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 285 LRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSA 344
+ + +H VV G+ + V+++L+DMY + GK+ A +F ++ D++ V+W M++
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480
Query: 345 YCQNKEYEAVFELVR-----ERGVS----------DLYAFGTVLRACSGVAAVMLGKEVH 389
Y ++ +E L+ ER VS + T+L +C+ ++A+ GKE+H
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 390 CQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGT 449
++ DV V SALVD+YAKCGC+ ++++F + +N ITWN +I +G G
Sbjct: 541 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600
Query: 450 EVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCM 509
E ++L M+ +G++P+ +TFI V ACSH+G+VDEG R F +M +YG++P +HY C+
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV 660
Query: 510 IDLLGRAEMIEEAESLLENADCRYDHS-LWAVLLGACTKCSDYVTAERVARKMIELEPDF 568
+DLLGRA I+EA L+ ++ + W+ LLGA ++ E A+ +I+LEP+
Sbjct: 661 VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNV 720
Query: 569 HLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI--GSENQK 615
YVLL NIY + G W+ A E+R+ M+++GV+K PG SWI G E K
Sbjct: 721 ASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHK 769
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 151/462 (32%), Positives = 237/462 (51%), Gaps = 32/462 (6%)
Query: 62 LKPVLYA--SLLQTCTKTSSFLHGTTLHAHALKSGIHSDRF-VGNSLLTLYLKLGPHLPQ 118
+KP YA +LL+ G +HAH K G D V N+L+ LY K G
Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG-DFGA 151
Query: 119 AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASK 178
+FD ++ R+ ++W SLIS+ + +L+ F MLD ++EP++FT+ SV+TA S
Sbjct: 152 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
Query: 179 L---RDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVG 235
L L +G +HA + +G N+ I + LV MYG+ + + K+ S D+V
Sbjct: 212 LPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASS-KVLLGSFGGRDLVT 269
Query: 236 WTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV 295
W ++S+L +N+ EAL M G+ PD FT ++L AC++L LR GKELHA
Sbjct: 270 WNTVLSSLCQNEQLLEALEYLREMVLE-GVEPDEFTISSVLPACSHLEMLRTGKELHAYA 328
Query: 296 VGLG-ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNK-EYEA 353
+ G + N V S+L+DMY C +V R VFD + D+ W AM++ Y QN+ + EA
Sbjct: 329 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEA 388
Query: 354 VFELVRERGVSDLYAFGT----VLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVD 409
+ + + L A T V+ AC A + +H V++G RD V++ L+D
Sbjct: 389 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 448
Query: 410 LYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDM------IKEG- 462
+Y++ G +D A R+F ME R+ +TWN MI G + + L L M + +G
Sbjct: 449 MYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGA 508
Query: 463 ----MEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIK 500
++P+ IT + +L +C+ + +G+ A Y IK
Sbjct: 509 SRVSLKPNSITLMTILPSCAALSALAKGKEIHA-----YAIK 545
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 214/442 (48%), Gaps = 15/442 (3%)
Query: 134 WTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVI 193
W L+ + R+ ++ + M+ L ++P+ + +++ A + L+D+ LG +HA V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 194 SRGFHSNTV-ISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREA 252
G+ ++V +++ LV++Y + K+FD E + V W ++IS+L + + A
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE-RNQVSWNSLISSLCSFEKWEMA 183
Query: 253 LRLFVAMHRGCGLVPDGFTFGTLLAACANLGW---LRQGKELHAKVVGLGICGNVVVESS 309
L F M + P FT +++ AC+NL L GK++HA + G + ++ ++
Sbjct: 184 LEAFRCMLDE-NVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NT 241
Query: 310 LLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRE---RGVS-D 365
L+ MYGK GK+ ++V+ G ++ V+W +LS+ CQN++ E +RE GV D
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301
Query: 366 LYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGW-RDVIVESALVDLYAKCGCVDFAQRLF 424
+ +VL ACS + + GKE+H ++ G + V SALVD+Y C V +R+F
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF 361
Query: 425 LSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKE-GMEPDYITFIGVLFACSHTGLV 483
M R WNAMI G +QN E L LF M + G+ + T GV+ AC +G
Sbjct: 362 DGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 484 DEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLG 543
+V G+ N ++D+ R I+ A + + R D W ++
Sbjct: 422 SRKEAIHGFVVKR-GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMIT 479
Query: 544 ACTKCSDYVTAERVARKMIELE 565
+ A + KM LE
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLE 501
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 209/429 (48%), Gaps = 52/429 (12%)
Query: 216 AVRDALKLF-DESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGT 274
AV A +F +S PE W ++ + R+++ REA+ +V M G+ PD + F
Sbjct: 47 AVSGAPSIFISQSRSPE---WWIDLLRSKVRSNLLREAVLTYVDMIV-LGIKPDNYAFPA 102
Query: 275 LLAACANLGWLRQGKELHAKVVGLGI-CGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK 333
LL A A+L + GK++HA V G +V V ++L+++Y KCG G VFDR+ ++
Sbjct: 103 LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER 162
Query: 334 NSVSWTAMLSAYCQNKEYEAVFELVR----ERGVSDLYAFGTVLRACSGVA---AVMLGK 386
N VSW +++S+ C +++E E R E + +V+ ACS + +M+GK
Sbjct: 163 NQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGK 222
Query: 387 EVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNG 446
+VH +RKG I+ + LV +Y K G + ++ L S R+ +TWN ++ L QN
Sbjct: 223 QVHAYGLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281
Query: 447 RGTEVLELFEDMIKEGMEPDYITFIGVLFACSH----------------TGLVDEGRRYF 490
+ E LE +M+ EG+EPD T VL ACSH G +DE
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341
Query: 491 ALMVDEY----GIKPGVEHYNCMID---------LLGRAEMIEEAESLL------ENADC 531
+ +VD Y + G ++ M D + G ++ + E+LL E+A
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 532 RYDHSLWAVLLGACTKCSDYVTAERVARKMIE--LEPDFHLSYVLLGNIYRAVGRWNDAM 589
+ + A ++ AC + + E + +++ L+ D + L+ ++Y +G+ + AM
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLM-DMYSRLGKIDIAM 460
Query: 590 EIRKLMEDR 598
I MEDR
Sbjct: 461 RIFGKMEDR 469
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 350 bits (897), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 196/552 (35%), Positives = 301/552 (54%), Gaps = 10/552 (1%)
Query: 65 VLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRF--VGNSLLTLYLKLGPHLPQAQTL 122
V + +LL C +HA A+K G ++ F V N LL Y ++ L A L
Sbjct: 148 VTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVR-RLDLACVL 206
Query: 123 FDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDL 182
F+ + +D + + +LI+ Y + G S+ LF +M +P+ FT S V+ A L D
Sbjct: 207 FEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDF 266
Query: 183 ALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIST 242
ALG LHA+ ++ GF + + + ++D Y ++ V + LFDE PE D V + +IS+
Sbjct: 267 ALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL-DFVSYNVVISS 325
Query: 243 LTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICG 302
++ D + +L F M + G F F T+L+ ANL L+ G++LH + +
Sbjct: 326 YSQADQYEASLHFFREM-QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384
Query: 303 NVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERG 362
+ V +SL+DMY KC +A ++F L + +VSWTA++S Y Q + A +L +
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 363 VSDLYA----FGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
S+L A F TVL+A + A+++LGK++H +R G +V S LVD+YAKCG +
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504
Query: 419 FAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACS 478
A ++F M RN ++WNA+I A NG G + F MI+ G++PD ++ +GVL ACS
Sbjct: 505 DAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564
Query: 479 HTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLW 538
H G V++G YF M YGI P +HY CM+DLLGR EAE L++ D +W
Sbjct: 565 HCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMW 624
Query: 539 AVLLGACTKCSDYVTAERVARKMIELEP-DFHLSYVLLGNIYRAVGRWNDAMEIRKLMED 597
+ +L AC + AER A K+ +E +YV + NIY A G W +++K M +
Sbjct: 625 SSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRE 684
Query: 598 RGVKKLPGKSWI 609
RG+KK+P SW+
Sbjct: 685 RGIKKVPAYSWV 696
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 233/482 (48%), Gaps = 15/482 (3%)
Query: 96 HSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFS 155
H + N++++ ++K G + A+ LFD++ R ++ WT L+ Y R + +LF
Sbjct: 76 HKNTVSTNTMISGHVKTGD-VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFR 134
Query: 156 QMLDLD--MEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNT--VISSALVDMY 211
QM P+ T ++++ + +HA + GF +N +S+ L+ Y
Sbjct: 135 QMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSY 194
Query: 212 GRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFT 271
R + A LF+E PE +D V + +I+ ++ ++ E++ LF+ M R G P FT
Sbjct: 195 CEVRRLDLACVLFEEIPE-KDSVTFNTLITGYEKDGLYTESIHLFLKM-RQSGHQPSDFT 252
Query: 272 FGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLG 331
F +L A L G++LHA V G + V + +LD Y K +V + R++FD +
Sbjct: 253 FSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
Query: 332 DKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDL----YAFGTVLRACSGVAAVMLGKE 387
+ + VS+ ++S+Y Q +YEA RE + F T+L + ++++ +G++
Sbjct: 313 ELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ 372
Query: 388 VHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGR 447
+HCQ + + V ++LVD+YAKC + A+ +F S+ R ++W A+I G Q G
Sbjct: 373 LHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGL 432
Query: 448 GTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYN 507
L+LF M + D TF VL A + + G++ A ++ G V +
Sbjct: 433 HGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFII-RSGNLENVFSGS 491
Query: 508 CMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIE--LE 565
++D+ + I++A + E R S W L+ A D A KMIE L+
Sbjct: 492 GLVDMYAKCGSIKDAVQVFEEMPDRNAVS-WNALISAHADNGDGEAAIGAFAKMIESGLQ 550
Query: 566 PD 567
PD
Sbjct: 551 PD 552
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 198/603 (32%), Positives = 330/603 (54%), Gaps = 31/603 (5%)
Query: 33 SEILQHC-KDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHAL 91
S I+ C ++ L AL Q ++ + +YAS+L++C S G LHAHAL
Sbjct: 250 SAIIAGCVQNNLLSLALKFFKEMQK-VNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL 308
Query: 92 KSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSL 151
KS +D V + L +Y K ++ AQ LFD+ + ++ ++I+ Y++ +L
Sbjct: 309 KSDFAADGIVRTATLDMYAKC-DNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKAL 367
Query: 152 QLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMY 211
LF +++ + + ++S V A + ++ L+ G ++ + I + +++A +DMY
Sbjct: 368 LLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMY 427
Query: 212 GRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFT 271
G+ +A+ +A ++FDE D V W AII+ +N E L LFV+M R + PD FT
Sbjct: 428 GKCQALAEAFRVFDE-MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS-RIEPDEFT 485
Query: 272 FGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLG 331
FG++L AC G L G E+H+ +V G+ N V SL+DMY KCG + +A + R
Sbjct: 486 FGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFF 544
Query: 332 DKNSVS--------------------WTAMLSAYC---QNKEYEAVFELVRERGVS-DLY 367
+ +VS W +++S Y Q+++ + +F + E G++ D +
Sbjct: 545 QRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKF 604
Query: 368 AFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSM 427
+ TVL C+ +A+ LGK++H Q ++K DV + S LVD+Y+KCG + ++ +F
Sbjct: 605 TYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKS 664
Query: 428 EVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGR 487
R+ +TWNAMI G A +G+G E ++LFE MI E ++P+++TFI +L AC+H GL+D+G
Sbjct: 665 LRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGL 724
Query: 488 RYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTK 547
YF +M +YG+ P + HY+ M+D+LG++ ++ A L+ D +W LLG CT
Sbjct: 725 EYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTI 784
Query: 548 CSDYV-TAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGK 606
+ V AE ++ L+P +Y LL N+Y G W ++R+ M +KK PG
Sbjct: 785 HRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGC 844
Query: 607 SWI 609
SW+
Sbjct: 845 SWV 847
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 143/497 (28%), Positives = 250/497 (50%), Gaps = 46/497 (9%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLK---------LGPHLP 117
++ + + C K + G HAH + SG FV N LL +Y + +P
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 118 ---------------------QAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQ 156
+A + F+ + VRD+++W S++S Y + G + S+++F
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 157 MLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRA 216
M +E + T + ++ S L D +LG +H +V+ G ++ V +SAL+DMY + +
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 217 VRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLL 276
++L++F PE ++ V W+AII+ +N++ AL+ F M + V + ++L
Sbjct: 231 FVESLRVFQGIPE-KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI-YASVL 288
Query: 277 AACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSV 336
+CA L LR G +LHA + + +V ++ LDMY KC + A+++FD + N
Sbjct: 289 RSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ 348
Query: 337 SWTAMLSAYCQNKE-YEA--VFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQY 392
S+ AM++ Y Q + ++A +F + G+ D + V RAC+ V + G +++
Sbjct: 349 SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLA 408
Query: 393 VRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVL 452
++ DV V +A +D+Y KC + A R+F M R+ ++WNA+I QNG+G E L
Sbjct: 409 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 468
Query: 453 ELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYN----C 508
LF M++ +EPD TF +L AC TG G + + + +K G+ +
Sbjct: 469 FLFVSMLRSRIEPDEFTFGSILKAC--TG----GSLGYGMEIHSSIVKSGMASNSSVGCS 522
Query: 509 MIDLLGRAEMIEEAESL 525
+ID+ + MIEEAE +
Sbjct: 523 LIDMYSKCGMIEEAEKI 539
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 141/571 (24%), Positives = 288/571 (50%), Gaps = 39/571 (6%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
+A +L+ C+ G +H ++ G +D ++LL +Y K G ++ +F +
Sbjct: 183 FAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK-GKRFVESLRVFQGI 241
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
++ ++W+++I+ + +L+ F +M ++ + +SV+ + + L +L LG
Sbjct: 242 PEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGG 301
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
LHA + F ++ ++ +A +DMY + ++DA LFD S E + + A+I+ ++
Sbjct: 302 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNS-ENLNRQSYNAMITGYSQE 360
Query: 247 DMFREALRLFVAMHR--GCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNV 304
+ +AL LF HR GL D + + ACA + L +G +++ + + +V
Sbjct: 361 EHGFKALLLF---HRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 417
Query: 305 VVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN-KEYEAVF---ELVRE 360
V ++ +DMYGKC + +A VFD + +++VSW A+++A+ QN K YE +F ++R
Sbjct: 418 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 477
Query: 361 RGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD-- 418
R D + FG++L+AC+G ++ G E+H V+ G + V +L+D+Y+KCG ++
Sbjct: 478 RIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 536
Query: 419 ------FAQRLFLS--ME----VRNQ------ITWNAMIGGLAQNGRGTEVLELFEDMIK 460
F QR +S ME + N+ ++WN++I G + + LF M++
Sbjct: 537 EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 596
Query: 461 EGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIE 520
G+ PD T+ VL C++ G++ A ++ + ++ V + ++D+ + +
Sbjct: 597 MGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK-ELQSDVYICSTLVDMYSKCGDLH 655
Query: 521 EAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMI--ELEPDFHLSYVLLGNI 578
++ + E + R D W ++ A ++ +MI ++P+ H++++ +
Sbjct: 656 DSRLMFEKS-LRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPN-HVTFISILRA 713
Query: 579 YRAVGRWNDAMEIRKLME-DRGVK-KLPGKS 607
+G + +E +M+ D G+ +LP S
Sbjct: 714 CAHMGLIDKGLEYFYMMKRDYGLDPQLPHYS 744
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 132/308 (42%), Gaps = 36/308 (11%)
Query: 271 TFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRL 330
F + CA G L GK+ HA ++ G V + LL +Y A +VFD++
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 331 ------------------GD-------------KNSVSWTAMLSAYCQN----KEYEAVF 355
D ++ VSW +MLS Y QN K E
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 356 ELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCG 415
++ RE D F +L+ CS + LG ++H VR G DV+ SAL+D+YAK
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 416 CVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLF 475
+ R+F + +N ++W+A+I G QN + L+ F++M K + VL
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 476 ACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDH 535
+C+ + G + A + G+ +D+ + + +++A+ L +N++
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIVR-TATLDMYAKCDNMQDAQILFDNSENLNRQ 348
Query: 536 SLWAVLLG 543
S A++ G
Sbjct: 349 SYNAMITG 356
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 88/210 (41%), Gaps = 33/210 (15%)
Query: 369 FGTVLRACSGVAAVMLGKEVHCQYVRKG-------------------------------G 397
F V + C+ A+ LGK+ H + G
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 398 WRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFED 457
RDV+ + +++ Y+K + A F M VR+ ++WN+M+ G QNG + +E+F D
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 458 MIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAE 517
M +EG+E D TF +L CS G + ++V G V + ++D+ + +
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVV-RVGCDTDVVAASALLDMYAKGK 229
Query: 518 MIEEAESLLENADCRYDHSLWAVLLGACTK 547
E+ + + + S W+ ++ C +
Sbjct: 230 RFVESLRVFQGIPEKNSVS-WSAIIAGCVQ 258
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 342 bits (876), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 191/553 (34%), Positives = 314/553 (56%), Gaps = 14/553 (2%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSG-IHSDRFVGNSLLTLYLKLGPHLPQAQTLFDS 125
Y ++++ C+ + G +K+G SD VG SL+ +++K A +FD
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 126 LAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALG 185
++ +++ WT +I+ + G P +++ F M+ E + FT+SSV +A ++L +L+LG
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRA---VRDALKLFDESPEPEDVVGWTAIIST 242
LH+ I G + + +LVDMY + A V D K+FD E V+ WTA+I+
Sbjct: 289 KQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRM-EDHSVMSWTALITG 345
Query: 243 LTRN-DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGIC 301
+N ++ EA+ LF M + P+ FTF + AC NL R GK++ + G+
Sbjct: 346 YMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLA 405
Query: 302 GNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELV--- 358
N V +S++ M+ K ++ A+ F+ L +KN VS+ L C+N +E F+L+
Sbjct: 406 SNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEI 465
Query: 359 --RERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGC 416
RE GVS + F ++L + V ++ G+++H Q V+ G + V +AL+ +Y+KCG
Sbjct: 466 TERELGVS-AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGS 524
Query: 417 VDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFA 476
+D A R+F ME RN I+W +MI G A++G VLE F MI+EG++P+ +T++ +L A
Sbjct: 525 IDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSA 584
Query: 477 CSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHS 536
CSH GLV EG R+F M +++ IKP +EHY CM+DLL RA ++ +A + + D
Sbjct: 585 CSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVL 644
Query: 537 LWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLME 596
+W LGAC S+ + ARK++EL+P+ +Y+ L NIY G+W ++ E+R+ M+
Sbjct: 645 VWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMK 704
Query: 597 DRGVKKLPGKSWI 609
+R + K G SWI
Sbjct: 705 ERNLVKEGGCSWI 717
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 157/589 (26%), Positives = 303/589 (51%), Gaps = 29/589 (4%)
Query: 32 DSEILQHCKDGSLRQALHLLN-TSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHA 90
D IL+H G LR A+ L+ ++ + P + V ++SLL++C + F G +HA
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRP-MDSVTFSSLLKSCIRARDFRLGKLVHARL 88
Query: 91 LKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL---AVRDIIAWTSLISAYTRAGRP 147
++ I D + NSL++LY K G +A+ +F+++ RD+++W+++++ Y GR
Sbjct: 89 IEFDIEPDSVLYNSLISLYSKSGDS-AKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRE 147
Query: 148 INSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRG-FHSNTVISSA 206
++++++F + L+L + PN + ++VI A S + +G ++ G F S+ + +
Sbjct: 148 LDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCS 207
Query: 207 LVDMY--GRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCG 264
L+DM+ G N + +A K+FD+ E +VV WT +I+ + REA+R F+ M G
Sbjct: 208 LIDMFVKGEN-SFENAYKVFDKMSEL-NVVTWTLMITRCMQMGFPREAIRFFLDMVLS-G 264
Query: 265 LVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKC---GKVG 321
D FT ++ +ACA L L GK+LH+ + G+ + VE SL+DMY KC G V
Sbjct: 265 FESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVD 322
Query: 322 QARVVFDRLGDKNSVSWTAMLSAYCQN----KEYEAVF-ELVRERGVS-DLYAFGTVLRA 375
R VFDR+ D + +SWTA+++ Y +N E +F E++ + V + + F + +A
Sbjct: 323 DCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA 382
Query: 376 CSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITW 435
C ++ +GK+V Q ++G + V ++++ ++ K ++ AQR F S+ +N +++
Sbjct: 383 CGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSY 442
Query: 436 NAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVD 495
N + G +N + +L ++ + + TF +L ++ G + +G + + +V
Sbjct: 443 NTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV- 501
Query: 496 EYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAE 555
+ G+ N +I + + I+ A + + R S W ++ K +
Sbjct: 502 KLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVIS-WTSMITGFAKHGFAIRVL 560
Query: 556 RVARKMIE--LEPDFHLSYVLLGNIYRAVGRWNDA-MEIRKLMEDRGVK 601
+MIE ++P+ ++YV + + VG ++ + ED +K
Sbjct: 561 ETFNQMIEEGVKPN-EVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIK 608
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 341 bits (874), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 193/562 (34%), Positives = 314/562 (55%), Gaps = 13/562 (2%)
Query: 58 LDPNLKPVLY--ASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPH 115
++ N+ P Y +++L C+ G +HAH L+ G+ D + N L+ Y+K G
Sbjct: 241 MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCG-R 299
Query: 116 LPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITA 175
+ A LF+ + ++II+WT+L+S Y + +++LF+ M ++P+ + SS++T+
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 176 ASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVG 235
+ L L G +HA I +++ ++++L+DMY + + DA K+FD DVV
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAA-DVVL 418
Query: 236 WTAIISTLTRNDM---FREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELH 292
+ A+I +R EAL +F M R + P TF +LL A A+L L K++H
Sbjct: 419 FNAMIEGYSRLGTQWELHEALNIFRDM-RFRLIRPSLLTFVSLLRASASLTSLGLSKQIH 477
Query: 293 AKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYE 352
+ G+ ++ S+L+D+Y C + +R+VFD + K+ V W +M + Y Q E E
Sbjct: 478 GLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENE 537
Query: 353 AVFELVRERGVS----DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALV 408
L E +S D + F ++ A +A+V LG+E HCQ +++G + + +AL+
Sbjct: 538 EALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALL 597
Query: 409 DLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYI 468
D+YAKCG + A + F S R+ + WN++I A +G G + L++ E M+ EG+EP+YI
Sbjct: 598 DMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYI 657
Query: 469 TFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLEN 528
TF+GVL ACSH GLV++G + F LM+ +GI+P EHY CM+ LLGRA + +A L+E
Sbjct: 658 TFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNKARELIEK 716
Query: 529 ADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDA 588
+ +W LL C K + AE A I +P S+ +L NIY + G W +A
Sbjct: 717 MPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEA 776
Query: 589 MEIRKLMEDRGVKKLPGKSWIG 610
++R+ M+ GV K PG+SWIG
Sbjct: 777 KKVRERMKVEGVVKEPGRSWIG 798
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/525 (28%), Positives = 275/525 (52%), Gaps = 15/525 (2%)
Query: 86 LHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAG 145
L + +KSG D +VG L+ YLK G ++ A+ +FD+L + + WT++IS + G
Sbjct: 170 LQSFLVKSGFDRDVYVGTLLIDFYLKDG-NIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 146 RPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISS 205
R SLQLF Q+++ ++ P+ + +S+V++A S L L G +HA ++ G + + +
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 206 ALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGL 265
L+D Y + V A KLF+ P ++++ WT ++S +N + +EA+ LF +M + GL
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPN-KNIISWTTLLSGYKQNALHKEAMELFTSMSK-FGL 346
Query: 266 VPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARV 325
PD + ++L +CA+L L G ++HA + + + V +SL+DMY KC + AR
Sbjct: 347 KPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARK 406
Query: 326 VFDRLGDKNSVSWTAMLSAY----CQNKEYEA--VFELVRERGV-SDLYAFGTVLRACSG 378
VFD + V + AM+ Y Q + +EA +F +R R + L F ++LRA +
Sbjct: 407 VFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASAS 466
Query: 379 VAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAM 438
+ ++ L K++H + G D+ SAL+D+Y+ C C+ ++ +F M+V++ + WN+M
Sbjct: 467 LTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSM 526
Query: 439 IGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYG 498
G Q E L LF ++ PD TF ++ A + V G+ + ++ G
Sbjct: 527 FAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKR-G 585
Query: 499 IKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVA 558
++ N ++D+ + E+A ++A R D W ++ + + A ++
Sbjct: 586 LECNPYITNALLDMYAKCGSPEDAHKAFDSAASR-DVVCWNSVISSYANHGEGKKALQML 644
Query: 559 RKMIE--LEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
KM+ +EP++ +++V + + G D ++ +LM G++
Sbjct: 645 EKMMSEGIEPNY-ITFVGVLSACSHAGLVEDGLKQFELMLRFGIE 688
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 254/494 (51%), Gaps = 15/494 (3%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
+A LLQ + +H + G+ D ++ N L+ LY + G + A+ +F+ +
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGG-MVYARKVFEKM 105
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDME-PNAFTISSVITAASKL--RDLA 183
R++++W++++SA G SL +F + + PN + +SS I A S L R
Sbjct: 106 PERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRW 165
Query: 184 LGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTL 243
+ L + ++ GF + + + L+D Y ++ + A +FD PE + V WT +IS
Sbjct: 166 MVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPE-KSTVTWTTMISGC 224
Query: 244 TRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGN 303
+ +L+LF + +VPDG+ T+L+AC+ L +L GK++HA ++ G+ +
Sbjct: 225 VKMGRSYVSLQLFYQLMED-NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMD 283
Query: 304 VVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRE 360
+ + L+D Y KCG+V A +F+ + +KN +SWT +LS Y QN KE +F + +
Sbjct: 284 ASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSK 343
Query: 361 RGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDF 419
G+ D+YA ++L +C+ + A+ G +VH ++ D V ++L+D+YAKC C+
Sbjct: 344 FGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTD 403
Query: 420 AQRLFLSMEVRNQITWNAMIGGLAQNGRGTEV---LELFEDMIKEGMEPDYITFIGVLFA 476
A+++F + + +NAMI G ++ G E+ L +F DM + P +TF+ +L A
Sbjct: 404 ARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Query: 477 CSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHS 536
+ + ++ LM +YG+ + + +ID+ ++++ + + + D
Sbjct: 464 SASLTSLGLSKQIHGLMF-KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLV 521
Query: 537 LWAVLLGACTKCSD 550
+W + + S+
Sbjct: 522 IWNSMFAGYVQQSE 535
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 209/424 (49%), Gaps = 15/424 (3%)
Query: 33 SEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYA--SLLQTCTKTSSFLHGTTLHAHA 90
+ +L K +L + L TS + LKP +YA S+L +C + GT +HA+
Sbjct: 319 TTLLSGYKQNALHKEAMELFTSMSKF--GLKPDMYACSSILTSCASLHALGFGTQVHAYT 376
Query: 91 LKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPI-- 148
+K+ + +D +V NSL+ +Y K L A+ +FD A D++ + ++I Y+R G
Sbjct: 377 IKANLGNDSYVTNSLIDMYAKCDC-LTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWEL 435
Query: 149 -NSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSAL 207
+L +F M + P+ T S++ A++ L L L +H ++ G + + SAL
Sbjct: 436 HEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSAL 495
Query: 208 VDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVP 267
+D+Y ++D+ +FDE + +D+V W ++ + + EAL LF+ + P
Sbjct: 496 IDVYSNCYCLKDSRLVFDEM-KVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRER-P 553
Query: 268 DGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVF 327
D FTF ++ A NL ++ G+E H +++ G+ N + ++LLDMY KCG A F
Sbjct: 554 DEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAF 613
Query: 328 DRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRE---RGVSDLY-AFGTVLRACSGVAAVM 383
D ++ V W +++S+Y + E + +++ + G+ Y F VL ACS V
Sbjct: 614 DSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVE 673
Query: 384 LGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRN-QITWNAMIGGL 442
G + +R G + +V L + G ++ A+ L M + I W +++ G
Sbjct: 674 DGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGC 733
Query: 443 AQNG 446
A+ G
Sbjct: 734 AKAG 737
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 338 bits (867), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 197/600 (32%), Positives = 317/600 (52%), Gaps = 47/600 (7%)
Query: 65 VLYASLLQTCTKTSSFLHGTTLHAHAL-KSGIHSDR----------FVGNSLLTLYLKLG 113
+++ ++++ +FL+ +HA+AL KS ++ R F N+LL Y K G
Sbjct: 27 MIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAG 86
Query: 114 PHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQML-DLDMEPNAFTISSV 172
+ + ++ F+ L RD + W LI Y+ +G +++ ++ M+ D T+ ++
Sbjct: 87 L-ISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 173 ITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLF---DESPE 229
+ +S ++LG +H VI GF S ++ S L+ MY + DA K+F D+
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 230 --------------------------PEDVVGWTAIISTLTRNDMFREALRLFVAMHRGC 263
+D V W A+I L +N + +EA+ F M +
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREM-KVQ 264
Query: 264 GLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQA 323
GL D + FG++L AC LG + +GK++HA ++ ++ V S+L+DMY KC + A
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYA 324
Query: 324 RVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRERGVS-DLYAFGTVLRACSGV 379
+ VFDR+ KN VSWTAM+ Y Q +E +F ++ G+ D Y G + AC+ V
Sbjct: 325 KTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANV 384
Query: 380 AAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMI 439
+++ G + H + + G V V ++LV LY KCG +D + RLF M VR+ ++W AM+
Sbjct: 385 SSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMV 444
Query: 440 GGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGI 499
AQ GR E ++LF+ M++ G++PD +T GV+ ACS GLV++G+RYF LM EYGI
Sbjct: 445 SAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGI 504
Query: 500 KPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVAR 559
P + HY+CMIDL R+ +EEA + D W LL AC + + A
Sbjct: 505 VPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAE 564
Query: 560 KMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQKGSLS 619
+IEL+P Y LL +IY + G+W+ ++R+ M ++ VKK PG+SWI + + S S
Sbjct: 565 SLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFS 624
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 337 bits (864), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 192/548 (35%), Positives = 310/548 (56%), Gaps = 7/548 (1%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
+ L C+++ + G +H +K G+H+D +V SLL++Y K G + +A+T+F +
Sbjct: 275 FTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCG-MVGEAETVFSCV 333
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
+ + W ++++AY ++L LF M + P++FT+S+VI+ S L G
Sbjct: 334 VDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGK 393
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
+HA + R S + I SAL+ +Y + DA +F +S E +D+V W ++IS L +N
Sbjct: 394 SVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVF-KSMEEKDMVAWGSLISGLCKN 452
Query: 247 DMFREALRLFVAMHRGC-GLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV 305
F+EAL++F M L PD ++ ACA L LR G ++H ++ G+ NV
Sbjct: 453 GKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVF 512
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEA---VFELVRERG 362
V SSL+D+Y KCG A VF + +N V+W +M+S Y +N E +F L+ +G
Sbjct: 513 VGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQG 572
Query: 363 V-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
+ D + +VL A S A+++ GK +H +R G D +++AL+D+Y KCG +A+
Sbjct: 573 IFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAE 632
Query: 422 RLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG 481
+F M+ ++ ITWN MI G +G L LF++M K G PD +TF+ ++ AC+H+G
Sbjct: 633 NIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSG 692
Query: 482 LVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVL 541
V+EG+ F M +YGI+P +EHY M+DLLGRA ++EEA S ++ D S+W L
Sbjct: 693 FVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCL 752
Query: 542 LGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
L A + A K++ +EP+ +YV L N+Y G N+A ++ LM+++G+
Sbjct: 753 LSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLH 812
Query: 602 KLPGKSWI 609
K PG SWI
Sbjct: 813 KQPGCSWI 820
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 150/491 (30%), Positives = 244/491 (49%), Gaps = 24/491 (4%)
Query: 29 SSTDSEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHA 88
+S +S I + G QALHL + + + SLL+ C+ ++ +G T+H
Sbjct: 25 ASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHG 84
Query: 89 HALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFD-------SLAVRDIIAWTSLISAY 141
+ G D F+ SL+ +Y+K G L A +FD ++ RD+ W S+I Y
Sbjct: 85 SVVVLGWRYDPFIATSLVNMYVKCG-FLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGY 143
Query: 142 TRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDL--ALGACLHAMVISRGFHS 199
+ R + F +ML + P+AF++S V++ K + G +H ++ +
Sbjct: 144 FKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDT 203
Query: 200 NTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLF-VA 258
++ + +AL+DMY + DA ++F E + +VV W +I + + +L L+ +A
Sbjct: 204 DSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLA 263
Query: 259 MHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCG 318
+ LV FT L AC+ G+++H VV +G+ + V +SLL MY KCG
Sbjct: 264 KNNSVKLVSTSFT--GALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCG 321
Query: 319 KVGQARVVFDRLGDKNSVSWTAMLSAYCQNKE-YEA--VFELVRERGV-SDLYAFGTVLR 374
VG+A VF + DK W AM++AY +N Y A +F +R++ V D + V+
Sbjct: 322 MVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVIS 381
Query: 375 ACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQIT 434
CS + GK VH + ++ +ESAL+ LY+KCGC A +F SME ++ +
Sbjct: 382 CCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVA 441
Query: 435 WNAMIGGLAQNGRGTEVLELFEDMI--KEGMEPDYITFIGVLFACSHTGLVDEGRRYFAL 492
W ++I GL +NG+ E L++F DM + ++PD V AC+ GL E R F L
Sbjct: 442 WGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACA--GL--EALR-FGL 496
Query: 493 MVDEYGIKPGV 503
V IK G+
Sbjct: 497 QVHGSMIKTGL 507
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 226/452 (50%), Gaps = 9/452 (1%)
Query: 82 HGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAY 141
G +H L++ + +D F+ +L+ +Y K G + + + +++ W +I +
Sbjct: 188 EGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGF 247
Query: 142 TRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNT 201
+G +SL L+ + ++ + + + + A S+ + G +H V+ G H++
Sbjct: 248 GGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDP 307
Query: 202 VISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHR 261
+ ++L+ MY + V +A +F + + W A+++ ND AL LF M R
Sbjct: 308 YVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEI-WNAMVAAYAENDYGYSALDLFGFM-R 365
Query: 262 GCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVG 321
++PD FT +++ C+ LG GK +HA++ I +ES+LL +Y KCG
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDP 425
Query: 322 QARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRERGVS---DLYAFGTVLRA 375
A +VF + +K+ V+W +++S C+N KE VF +++ S D +V A
Sbjct: 426 DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNA 485
Query: 376 CSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITW 435
C+G+ A+ G +VH ++ G +V V S+L+DLY+KCG + A ++F SM N + W
Sbjct: 486 CAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAW 545
Query: 436 NAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVD 495
N+MI ++N ++LF M+ +G+ PD ++ VL A S T + +G+ +
Sbjct: 546 NSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTL- 604
Query: 496 EYGIKPGVEHYNCMIDLLGRAEMIEEAESLLE 527
GI N +ID+ + + AE++ +
Sbjct: 605 RLGIPSDTHLKNALIDMYVKCGFSKYAENIFK 636
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 336 bits (862), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 189/532 (35%), Positives = 305/532 (57%), Gaps = 8/532 (1%)
Query: 82 HGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAY 141
G LH ALKSG++S V N L+ +YLK A+ +FD + VRD +++ ++I Y
Sbjct: 225 QGQGLHGFALKSGVNSVVVVNNGLVAMYLKFR-RPTDARRVFDEMDVRDSVSYNTMICGY 283
Query: 142 TRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNT 201
+ S+++F + LD +P+ T+SSV+ A LRDL+L ++ ++ GF +
Sbjct: 284 LKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLES 342
Query: 202 VISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHR 261
+ + L+D+Y + + A +F+ S E +D V W +IIS ++ EA++LF M
Sbjct: 343 TVRNILIDVYAKCGDMITARDVFN-SMECKDTVSWNSIISGYIQSGDLMEAMKLF-KMMM 400
Query: 262 GCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVG 321
D T+ L++ L L+ GK LH+ + GIC ++ V ++L+DMY KCG+VG
Sbjct: 401 IMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVG 460
Query: 322 QARVVFDRLGDKNSVSWTAMLSAYCQNKEY----EAVFELVRERGVSDLYAFGTVLRACS 377
+ +F +G ++V+W ++SA + ++ + ++ + V D+ F L C+
Sbjct: 461 DSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCA 520
Query: 378 GVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNA 437
+AA LGKE+HC +R G ++ + +AL+++Y+KCGC++ + R+F M R+ +TW
Sbjct: 521 SLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTG 580
Query: 438 MIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEY 497
MI G G + LE F DM K G+ PD + FI +++ACSH+GLVDEG F M Y
Sbjct: 581 MIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHY 640
Query: 498 GIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERV 557
I P +EHY C++DLL R++ I +AE ++ + D S+WA +L AC D TAERV
Sbjct: 641 KIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERV 700
Query: 558 ARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
+R++IEL PD +L N Y A+ +W+ IRK ++D+ + K PG SWI
Sbjct: 701 SRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWI 752
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/520 (27%), Positives = 261/520 (50%), Gaps = 17/520 (3%)
Query: 32 DSEILQHCKDGSLRQALHL---LNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHA 88
+S I K+G +AL L S+ + D P S+++ C G ++
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFP----SVIKACAGLFDAEMGDLVYE 130
Query: 89 HALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPI 148
L G SD FVGN+L+ +Y ++G L +A+ +FD + VRD+++W SLIS Y+ G
Sbjct: 131 QILDMGFESDLFVGNALVDMYSRMG-LLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYE 189
Query: 149 NSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALV 208
+L+++ ++ + + P++FT+SSV+ A L + G LH + G +S V+++ LV
Sbjct: 190 EALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLV 249
Query: 209 DMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPD 268
MY + R DA ++FDE + D V + +I + +M E++R+F + PD
Sbjct: 250 AMYLKFRRPTDARRVFDEM-DVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFKPD 306
Query: 269 GFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFD 328
T ++L AC +L L K ++ ++ G V + L+D+Y KCG + AR VF+
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 329 RLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGV----SDLYAFGTVLRACSGVAAVML 384
+ K++VSW +++S Y Q+ + +L + + +D + ++ + +A +
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 385 GKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQ 444
GK +H ++ G D+ V +AL+D+YAKCG V + ++F SM + +TWN +I +
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVR 486
Query: 445 NGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVE 504
G L++ M K + PD TF+ L C+ G+ ++ +G + ++
Sbjct: 487 FGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL-RFGYESELQ 545
Query: 505 HYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGA 544
N +I++ + +E + + E R D W ++ A
Sbjct: 546 IGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYA 584
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 141/494 (28%), Positives = 250/494 (50%), Gaps = 23/494 (4%)
Query: 86 LHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAG 145
+HA + G+ S F L+ Y +++ W S+I A+++ G
Sbjct: 26 IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG 85
Query: 146 RPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISS 205
+L+ + ++ + + P+ +T SVI A + L D +G ++ ++ GF S+ + +
Sbjct: 86 LFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGN 145
Query: 206 ALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGL 265
ALVDMY R + A ++FDE P D+V W ++IS + + + EAL ++ + + +
Sbjct: 146 ALVDMYSRMGLLTRARQVFDEMP-VRDLVSWNSLISGYSSHGYYEEALEIYHEL-KNSWI 203
Query: 266 VPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARV 325
VPD FT ++L A NL ++QG+ LH + G+ VVV + L+ MY K + AR
Sbjct: 204 VPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARR 263
Query: 326 VFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVR------ERGVSDLYAFGTVLRACSGV 379
VFD + ++SVS+ M+ Y + E V E VR ++ DL +VLRAC +
Sbjct: 264 VFDEMDVRDSVSYNTMICGYLK---LEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHL 320
Query: 380 AAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMI 439
+ L K ++ ++ G + V + L+D+YAKCG + A+ +F SME ++ ++WN++I
Sbjct: 321 RDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSII 380
Query: 440 GGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGI 499
G Q+G E ++LF+ M+ + D+IT++ +L + S T L D F + GI
Sbjct: 381 SGYIQSGDLMEAMKLFKMMMIMEEQADHITYL-MLISVS-TRLADLK---FGKGLHSNGI 435
Query: 500 KPGV----EHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAE 555
K G+ N +ID+ + + ++ + + D W ++ AC + D+ T
Sbjct: 436 KSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNTVISACVRFGDFATGL 494
Query: 556 RVARKM--IELEPD 567
+V +M E+ PD
Sbjct: 495 QVTTQMRKSEVVPD 508
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 157/327 (48%), Gaps = 44/327 (13%)
Query: 276 LAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGD-KN 334
L++ +NL LR+ +HA V+ LG+ + L+D Y + + VF R+ KN
Sbjct: 14 LSSSSNLNELRR---IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKN 70
Query: 335 SVSWTAMLSAYCQNKEYEAVFEL---VRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHC 390
W +++ A+ +N + E +RE VS D Y F +V++AC+G+ +G V+
Sbjct: 71 VYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYE 130
Query: 391 QYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTE 450
Q + G D+ V +ALVD+Y++ G + A+++F M VR+ ++WN++I G + +G E
Sbjct: 131 QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 190
Query: 451 VLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGR--RYFAL---------------- 492
LE++ ++ + PD T VL A + +V +G+ FAL
Sbjct: 191 ALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVA 250
Query: 493 -------------MVDEYGIKPGVEHYNCMIDLLGRAEMIEEA-ESLLENADCRYDHSLW 538
+ DE ++ V YN MI + EM+EE+ LEN D ++ L
Sbjct: 251 MYLKFRRPTDARRVFDEMDVRDSVS-YNTMICGYLKLEMVEESVRMFLENLD-QFKPDLL 308
Query: 539 AV--LLGACTKCSDYVTAERVARKMIE 563
V +L AC D A+ + M++
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLK 335
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 147/317 (46%), Gaps = 6/317 (1%)
Query: 30 STDSEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAH 89
S +S I + + G L +A+ L ++ + Y L+ T+ + G LH++
Sbjct: 375 SWNSIISGYIQSGDLMEAMKLFKM-MMIMEEQADHITYLMLISVSTRLADLKFGKGLHSN 433
Query: 90 ALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPIN 149
+KSGI D V N+L+ +Y K G + + +F S+ D + W ++ISA R G
Sbjct: 434 GIKSGICIDLSVSNALIDMYAKCG-EVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFAT 492
Query: 150 SLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVD 209
LQ+ +QM ++ P+ T + + L LG +H ++ G+ S I +AL++
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIE 552
Query: 210 MYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDG 269
MY + + ++ ++F E DVV WT +I +AL F M + G+VPD
Sbjct: 553 MYSKCGCLENSSRVF-ERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKS-GIVPDS 610
Query: 270 FTFGTLLAACANLGWLRQGKELHAKV-VGLGICGNVVVESSLLDMYGKCGKVGQARVVFD 328
F ++ AC++ G + +G K+ I + + ++D+ + K+ +A
Sbjct: 611 VVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQ 670
Query: 329 RLGDKNSVS-WTAMLSA 344
+ K S W ++L A
Sbjct: 671 AMPIKPDASIWASVLRA 687
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 189/532 (35%), Positives = 290/532 (54%), Gaps = 8/532 (1%)
Query: 83 GTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYT 142
G LH LKSG VGNSL+ YLK + A+ +FD + RD+I+W S+I+ Y
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLK-NQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 143 RAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTV 202
G L +F QML +E + TI SV + R ++LG +H++ + F
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 203 ISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRG 262
+ L+DMY + + A +F E + VV +T++I+ R + EA++LF M
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSD-RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 263 CGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQ 322
G+ PD +T +L CA L +GK +H + + ++ V ++L+DMY KCG + +
Sbjct: 392 -GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 450
Query: 323 ARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRE--RGVSDLYAFGTVLRACS 377
A +VF + K+ +SW ++ Y +N E ++F L+ E R D VL AC+
Sbjct: 451 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 510
Query: 378 GVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNA 437
++A G+E+H +R G + D V ++LVD+YAKCG + A LF + ++ ++W
Sbjct: 511 SLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTV 570
Query: 438 MIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEY 497
MI G +G G E + LF M + G+E D I+F+ +L+ACSH+GLVDEG R+F +M E
Sbjct: 571 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 630
Query: 498 GIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERV 557
I+P VEHY C++D+L R + +A +EN D ++W LL C D AE+V
Sbjct: 631 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKV 690
Query: 558 ARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
A K+ ELEP+ YVL+ NIY +W +RK + RG++K PG SWI
Sbjct: 691 AEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 142/467 (30%), Positives = 244/467 (52%), Gaps = 17/467 (3%)
Query: 29 SSTDSEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHA 88
+ ++++ + C+ G+L A+ LL S ++ P S+LQ C + S G +
Sbjct: 62 TDANTQLRRFCESGNLENAVKLLCVSGKW---DIDPRTLCSVLQLCADSKSLKDGKEVDN 118
Query: 89 HALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPI 148
+G D +G+ L +Y G L +A +FD + + + W L++ ++G
Sbjct: 119 FIRGNGFVIDSNLGSKLSLMYTNCGD-LKEASRVFDEVKIEKALFWNILMNELAKSGDFS 177
Query: 149 NSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALV 208
S+ LF +M+ +E +++T S V + S LR + G LH ++ GF + ++LV
Sbjct: 178 GSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLV 237
Query: 209 DMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPD 268
Y +N+ V A K+FDE E DV+ W +II+ N + + L +FV M G+ D
Sbjct: 238 AFYLKNQRVDSARKVFDEMTE-RDVISWNSIINGYVSNGLAEKGLSVFVQMLVS-GIEID 295
Query: 269 GFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVE--SSLLDMYGKCGKVGQARVV 326
T ++ A CA+ + G+ +H+ +G+ C + ++LLDMY KCG + A+ V
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHS--IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 327 FDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRERGVS-DLYAFGTVLRACSGVAAV 382
F + D++ VS+T+M++ Y + E +FE + E G+S D+Y VL C+ +
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 413
Query: 383 MLGKEVHCQYVRKGGWR-DVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGG 441
GK VH +++++ D+ V +AL+D+YAKCG + A+ +F M V++ I+WN +IGG
Sbjct: 414 DEGKRVH-EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 442 LAQNGRGTEVLELFEDMIKEG-MEPDYITFIGVLFACSHTGLVDEGR 487
++N E L LF +++E PD T VL AC+ D+GR
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 519
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 331 bits (849), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 182/563 (32%), Positives = 310/563 (55%), Gaps = 15/563 (2%)
Query: 58 LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLP 117
L+P+ + ASL+ C+ + G LHA+ K G S+ + +LL LY K +
Sbjct: 385 LEPDSNTL--ASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD-IE 441
Query: 118 QAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAAS 177
A F V +++ W ++ AY NS ++F QM ++ PN +T S++
Sbjct: 442 TALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI 501
Query: 178 KLRDLALGACLHAMVISRGFHSNTVISSALVDMY---GRNRAVRDALKLFDESPEPEDVV 234
+L DL LG +H+ +I F N + S L+DMY G+ D L F +DVV
Sbjct: 502 RLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF----AGKDVV 557
Query: 235 GWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAK 294
WT +I+ T+ + +AL F M G+ D ++ACA L L++G+++HA+
Sbjct: 558 SWTTMIAGYTQYNFDDKALTTFRQM-LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQ 616
Query: 295 VVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQ---NKEY 351
G ++ +++L+ +Y +CGK+ ++ + F++ ++++W A++S + Q N+E
Sbjct: 617 ACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Query: 352 EAVFELVRERGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDL 410
VF + G+ ++ + FG+ ++A S A + GK+VH + G + V +AL+ +
Sbjct: 677 LRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISM 736
Query: 411 YAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITF 470
YAKCG + A++ FL + +N+++WNA+I +++G G+E L+ F+ MI + P+++T
Sbjct: 737 YAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTL 796
Query: 471 IGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENAD 530
+GVL ACSH GLVD+G YF M EYG+ P EHY C++D+L RA ++ A+ ++
Sbjct: 797 VGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMP 856
Query: 531 CRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAME 590
+ D +W LL AC + E A ++ELEP+ +YVLL N+Y +W+
Sbjct: 857 IKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDL 916
Query: 591 IRKLMEDRGVKKLPGKSWIGSEN 613
R+ M+++GVKK PG+SWI +N
Sbjct: 917 TRQKMKEKGVKKEPGQSWIEVKN 939
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 151/488 (30%), Positives = 258/488 (52%), Gaps = 9/488 (1%)
Query: 64 PVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLF 123
P ++S+L C K S G LH LK G SD +V N+L++LY LG +L A+ +F
Sbjct: 288 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG-NLISAEHIF 346
Query: 124 DSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLA 183
+++ RD + + +LI+ ++ G +++LF +M +EP++ T++S++ A S L
Sbjct: 347 SNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLF 406
Query: 184 LGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTL 243
G LHA GF SN I AL+++Y + + AL F E+ E E+VV W ++
Sbjct: 407 RGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET-EVENVVLWNVMLVAY 465
Query: 244 TRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGN 303
D R + R+F M +VP+ +T+ ++L C LG L G+++H++++ N
Sbjct: 466 GLLDDLRNSFRIFRQMQIE-EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLN 524
Query: 304 VVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQ-NKEYEAV--FELVRE 360
V S L+DMY K GK+ A + R K+ VSWT M++ Y Q N + +A+ F + +
Sbjct: 525 AYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD 584
Query: 361 RGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDF 419
RG+ SD + AC+G+ A+ G+++H Q G D+ ++ALV LY++CG ++
Sbjct: 585 RGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEE 644
Query: 420 AQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSH 479
+ F E + I WNA++ G Q+G E L +F M +EG++ + TF + A S
Sbjct: 645 SYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASE 704
Query: 480 TGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWA 539
T + +G++ A+ + + G E N +I + + I +AE + + S W
Sbjct: 705 TANMKQGKQVHAV-ITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS-WN 762
Query: 540 VLLGACTK 547
++ A +K
Sbjct: 763 AIINAYSK 770
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 137/500 (27%), Positives = 239/500 (47%), Gaps = 10/500 (2%)
Query: 67 YASLLQTCTKTS-SFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDS 125
++ +L+ C S +F +HA L G+ V N L+ LY + G + A+ +FD
Sbjct: 189 FSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNG-FVDLARRVFDG 247
Query: 126 LAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALG 185
L ++D +W ++IS ++ +++LF M L + P + SSV++A K+ L +G
Sbjct: 248 LRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG 307
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTR 245
LH +V+ GF S+T + +ALV +Y + A +F + D V + +I+ L++
Sbjct: 308 EQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQ-RDAVTYNTLINGLSQ 366
Query: 246 NDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV 305
+A+ LF MH GL PD T +L+ AC+ G L +G++LHA LG N
Sbjct: 367 CGYGEKAMELFKRMHLD-GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK 425
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSD 365
+E +LL++Y KC + A F +N V W ML AY + F + R+ + +
Sbjct: 426 IEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEE 485
Query: 366 L----YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
+ Y + ++L+ C + + LG+++H Q ++ + V S L+D+YAK G +D A
Sbjct: 486 IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAW 545
Query: 422 RLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG 481
+ + ++ ++W MI G Q + L F M+ G+ D + + AC+
Sbjct: 546 DILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQ 605
Query: 482 LVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVL 541
+ EG++ A G + N ++ L R IEE+ E + D+ W L
Sbjct: 606 ALKEGQQIHAQACVS-GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAG-DNIAWNAL 663
Query: 542 LGACTKCSDYVTAERVARKM 561
+ + + A RV +M
Sbjct: 664 VSGFQQSGNNEEALRVFVRM 683
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 218/445 (48%), Gaps = 19/445 (4%)
Query: 60 PNLKPVLYASLLQTCTKTSSFL-HGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQ 118
PN + + + LL+ C KT+ L G LH+ LK G+ S+ + L YL G L
Sbjct: 82 PNHQTLKW--LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGD-LYG 138
Query: 119 AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITA--- 175
A +FD + R I W +I LF +M+ ++ PN T S V+ A
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 176 ASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVG 235
S D+ +HA ++ +G +TV+ + L+D+Y RN V A ++FD +D
Sbjct: 199 GSVAFDVV--EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFD-GLRLKDHSS 255
Query: 236 WTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV 295
W A+IS L++N+ EA+RLF M+ G++P + F ++L+AC + L G++LH V
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 314
Query: 296 VGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVF 355
+ LG + V ++L+ +Y G + A +F + +++V++ +++ Q E
Sbjct: 315 LKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAM 374
Query: 356 ELVRERGVS----DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLY 411
EL + + D +++ ACS + G+++H + G + +E AL++LY
Sbjct: 375 ELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLY 434
Query: 412 AKCGCVDFAQRLFLSMEVRNQITWNAMI--GGLAQNGRGTEVLELFEDMIKEGMEPDYIT 469
AKC ++ A FL EV N + WN M+ GL + R + +F M E + P+ T
Sbjct: 435 AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNS--FRIFRQMQIEEIVPNQYT 492
Query: 470 FIGVLFACSHTGLVDEGRRYFALMV 494
+ +L C G ++ G + + ++
Sbjct: 493 YPSILKTCIRLGDLELGEQIHSQII 517
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 131/421 (31%), Positives = 207/421 (49%), Gaps = 40/421 (9%)
Query: 162 MEPNAFTISSVITAASKLR-DLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDA 220
+ PN T+ ++ K L G LH+ ++ G SN +S L D Y + A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 221 LKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACA 280
K+FDE PE + W +I L ++ E LFV M + P+ TF +L AC
Sbjct: 140 FKVFDEMPE-RTIFTWNKMIKELASRNLIGEVFGLFVRMVSE-NVTPNEGTFSGVLEAC- 196
Query: 281 NLGWLRQG-------KELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK 333
R G +++HA+++ G+ + VV + L+D+Y + G V AR VFD L K
Sbjct: 197 -----RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251
Query: 334 NSVSWTAMLSAYCQNK-EYEAV--FELVRERGVSDL-YAFGTVLRACSGVAAVMLGKEVH 389
+ SW AM+S +N+ E EA+ F + G+ YAF +VL AC + ++ +G+++H
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 311
Query: 390 CQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGT 449
++ G D V +ALV LY G + A+ +F +M R+ +T+N +I GL+Q G G
Sbjct: 312 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 371
Query: 450 EVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYN-- 507
+ +ELF+ M +G+EPD T ++ ACS G + G++ A Y K G N
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA-----YTTKLGFASNNKI 426
Query: 508 --CMIDLLGRAEMIEEA-----ESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARK 560
+++L + IE A E+ +EN LW V+L A D + R+ R+
Sbjct: 427 EGALLNLYAKCADIETALDYFLETEVENV------VLWNVMLVAYGLLDDLRNSFRIFRQ 480
Query: 561 M 561
M
Sbjct: 481 M 481
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 331 bits (848), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 189/592 (31%), Positives = 321/592 (54%), Gaps = 12/592 (2%)
Query: 30 STDSEILQHCKDGSLRQALHL-LNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHA 88
S S I + ++G +A+ L L Q L P+ + S+++ C +S G LHA
Sbjct: 135 SYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD--QFAFGSIIKACASSSDVGLGKQLHA 192
Query: 89 HALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPI 148
+K S N+L+ +Y++ + A +F + ++D+I+W+S+I+ +++ G
Sbjct: 193 QVIKLESSSHLIAQNALIAMYVRFN-QMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEF 251
Query: 149 NSLQLFSQMLDLDM-EPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSAL 207
+L +ML + PN + S + A S L G+ +H + I N + +L
Sbjct: 252 EALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSL 311
Query: 208 VDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVP 267
DMY R + A ++FD+ P D W II+ L N EA+ +F M R G +P
Sbjct: 312 CDMYARCGFLNSARRVFDQIERP-DTASWNVIIAGLANNGYADEAVSVFSQM-RSSGFIP 369
Query: 268 DGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVF 327
D + +LL A L QG ++H+ ++ G ++ V +SLL MY C + +F
Sbjct: 370 DAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLF 429
Query: 328 -DRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVS----DLYAFGTVLRACSGVAAV 382
D + +SVSW +L+A Q+++ + L + VS D G +LR C ++++
Sbjct: 430 EDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSL 489
Query: 383 MLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGL 442
LG +VHC ++ G + +++ L+D+YAKCG + A+R+F SM+ R+ ++W+ +I G
Sbjct: 490 KLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGY 549
Query: 443 AQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPG 502
AQ+G G E L LF++M G+EP+++TF+GVL ACSH GLV+EG + +A M E+GI P
Sbjct: 550 AQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPT 609
Query: 503 VEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMI 562
EH +C++DLL RA + EAE ++ D +W LL AC + A++ A ++
Sbjct: 610 KEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENIL 669
Query: 563 ELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
+++P ++VLL +++ + G W +A +R M+ VKK+PG+SWI E++
Sbjct: 670 KIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDK 721
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 144/515 (27%), Positives = 259/515 (50%), Gaps = 21/515 (4%)
Query: 39 CKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSD 98
CK R+AL + +Q ++ Y SL+ C+ + S G +H H L S D
Sbjct: 42 CKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYD 101
Query: 99 RFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQML 158
+ N +L++Y K G L A+ +FD + R+++++TS+I+ Y++ G+ +++L+ +ML
Sbjct: 102 TILNNHILSMYGKCGS-LRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKML 160
Query: 159 DLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVR 218
D+ P+ F S+I A + D+ LG LHA VI S+ + +AL+ MY R +
Sbjct: 161 QEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMS 220
Query: 219 DALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAA 278
DA ++F P +D++ W++II+ ++ EAL M P+ + FG+ L A
Sbjct: 221 DASRVFYGIP-MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKA 279
Query: 279 CANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSW 338
C++L G ++H + + GN + SL DMY +CG + AR VFD++ ++ SW
Sbjct: 280 CSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASW 339
Query: 339 TAMLSAYCQN---KEYEAVFELVRERG-VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVR 394
+++ N E +VF +R G + D + ++L A + A+ G ++H ++
Sbjct: 340 NVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK 399
Query: 395 KGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQ---ITWNAMIGGLAQNGRGTEV 451
G D+ V ++L+ +Y C + LF + RN ++WN ++ Q+ + E+
Sbjct: 400 WGFLADLTVCNSLLTMYTFCSDLYCCFNLF--EDFRNNADSVSWNTILTACLQHEQPVEM 457
Query: 452 LELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGV--EHY--N 507
L LF+ M+ EPD+IT +L C + G + V Y +K G+ E + N
Sbjct: 458 LRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ-----VHCYSLKTGLAPEQFIKN 512
Query: 508 CMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLL 542
+ID+ + + +A + ++ D R D W+ L+
Sbjct: 513 GLIDMYAKCGSLGQARRIFDSMDNR-DVVSWSTLI 546
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 330 bits (847), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 305/544 (56%), Gaps = 7/544 (1%)
Query: 70 LLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVR 129
+L+ C ++S+ +G +LHA+A+K+ + S +VG+SLL +Y ++G + ++ +F + R
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGK-IDKSCRVFSEMPFR 172
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
+ + WT++I+ AGR L FS+M + + +T + + A + LR + G +H
Sbjct: 173 NAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIH 232
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMF 249
VI RGF + ++++L MY ++D L LF+ E DVV WT++I R
Sbjct: 233 THVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSE-RDVVSWTSLIVAYKRIGQE 291
Query: 250 REALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESS 309
+A+ F+ M R + P+ TF ++ +ACA+L L G++LH V+ LG+ ++ V +S
Sbjct: 292 VKAVETFIKM-RNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNS 350
Query: 310 LLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQ---NKEYEAVFELVRERGVSDL 366
++ MY CG + A V+F + ++ +SW+ ++ YCQ +E F +R+ G
Sbjct: 351 MMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPT 410
Query: 367 -YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFL 425
+A ++L +A + G++VH + G ++ V S+L+++Y+KCG + A +F
Sbjct: 411 DFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFG 470
Query: 426 SMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDE 485
+ + ++ AMI G A++G+ E ++LFE +K G PD +TFI VL AC+H+G +D
Sbjct: 471 ETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDL 530
Query: 486 GRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGAC 545
G YF +M + Y ++P EHY CM+DLL RA + +AE ++ + D +W LL AC
Sbjct: 531 GFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIAC 590
Query: 546 TKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPG 605
D R A +++EL+P + V L NIY + G +A +RK M+ +GV K PG
Sbjct: 591 KAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPG 650
Query: 606 KSWI 609
S I
Sbjct: 651 WSSI 654
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 225/438 (51%), Gaps = 10/438 (2%)
Query: 99 RFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQM- 157
+F NS L + G +L A+ +FD + DI++WTS+I Y A +L LFS M
Sbjct: 40 KFDPNSHLRSLINAG-NLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMR 98
Query: 158 -LDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRA 216
+D + P+ +S V+ A + ++A G LHA + S+ + S+L+DMY R
Sbjct: 99 VVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGK 158
Query: 217 VRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLL 276
+ + ++F E P + V WTAII+ L ++E L F M R L D +TF L
Sbjct: 159 IDKSCRVFSEMP-FRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL-SDTYTFAIAL 216
Query: 277 AACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSV 336
ACA L ++ GK +H V+ G + V +SL MY +CG++ +F+ + +++ V
Sbjct: 217 KACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVV 276
Query: 337 SWTAMLSAYCQ-NKEYEAVFELVRERGVS---DLYAFGTVLRACSGVAAVMLGKEVHCQY 392
SWT+++ AY + +E +AV ++ R + F ++ AC+ ++ ++ G+++HC
Sbjct: 277 SWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNV 336
Query: 393 VRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVL 452
+ G + V ++++ +Y+ CG + A LF M R+ I+W+ +IGG Q G G E
Sbjct: 337 LSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGF 396
Query: 453 ELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDL 512
+ F M + G +P +L + +++ GR+ AL + +G++ + +I++
Sbjct: 397 KYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALC-FGLEQNSTVRSSLINM 455
Query: 513 LGRAEMIEEAESLLENAD 530
+ I+EA + D
Sbjct: 456 YSKCGSIKEASMIFGETD 473
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 197/427 (46%), Gaps = 42/427 (9%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
+A L+ C +G +H H + G + V NSL T+Y + G + LF+++
Sbjct: 212 FAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECG-EMQDGLCLFENM 270
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
+ RD+++WTSLI AY R G+ + +++ F +M + + PN T +S+ +A + L L G
Sbjct: 271 SERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGE 330
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
LH V+S G + + +S++++ MY + A LF + D++ W+ II +
Sbjct: 331 QLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLF-QGMRCRDIISWSTIIGGYCQA 389
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
E + F M R G P F +LL+ N+ + G+++HA + G+ N V
Sbjct: 390 GFGEEGFKYFSWM-RQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTV 448
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN-KEYEAV--FELVRERGV 363
SSL++MY KCG + +A ++F + VS TAM++ Y ++ K EA+ FE + G
Sbjct: 449 RSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGF 508
Query: 364 -SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVE-SALVDLYAKCGCVDFAQ 421
D F +VL AC+ + LG R +VDL + G + A+
Sbjct: 509 RPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAE 568
Query: 422 RLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG 481
++ N+++W + D + + +L AC G
Sbjct: 569 KMI------NEMSW----------------------------KKDDVVWTTLLIACKAKG 594
Query: 482 LVDEGRR 488
++ GRR
Sbjct: 595 DIERGRR 601
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 158/332 (47%), Gaps = 8/332 (2%)
Query: 217 VRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHR-GCGLVPDGFTFGTL 275
+R A ++FD+ P D+V WT+II + EAL LF AM + PD +
Sbjct: 56 LRAARQVFDKMPHG-DIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVV 114
Query: 276 LAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNS 335
L AC + G+ LHA V + +V V SSLLDMY + GK+ ++ VF + +N+
Sbjct: 115 LKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNA 174
Query: 336 VSWTAMLSAYCQNKEYEA----VFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQ 391
V+WTA+++ Y+ E+ R +SD Y F L+AC+G+ V GK +H
Sbjct: 175 VTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTH 234
Query: 392 YVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEV 451
+ +G + V ++L +Y +CG + LF +M R+ ++W ++I + G+ +
Sbjct: 235 VIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKA 294
Query: 452 LELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMID 511
+E F M + P+ TF + AC+ + G + V G+ + N M+
Sbjct: 295 VETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQ-LHCNVLSLGLNDSLSVSNSMMK 353
Query: 512 LLGRAEMIEEAESLLENADCRYDHSLWAVLLG 543
+ + A L + CR D W+ ++G
Sbjct: 354 MYSTCGNLVSASVLFQGMRCR-DIISWSTIIG 384
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 330 bits (845), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 194/561 (34%), Positives = 303/561 (54%), Gaps = 11/561 (1%)
Query: 61 NLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQ 120
N+ + SLL TC + G+ H+ +K + + FVGN+L+ +Y K G L A+
Sbjct: 425 NIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGA-LEDAR 483
Query: 121 TLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLR 180
+F+ + RD + W ++I +Y + + LF +M + + ++S + A + +
Sbjct: 484 QIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVH 543
Query: 181 DLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAII 240
L G +H + + G + S+L+DMY + ++DA K+F PE VV A+I
Sbjct: 544 GLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWS-VVSMNALI 602
Query: 241 STLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGI 300
+ ++N++ EA+ LF M G+ P TF T++ AC L G + H ++ G
Sbjct: 603 AGYSQNNL-EEAVVLFQEMLTR-GVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGF 660
Query: 301 CGN-VVVESSLLDMYGKCGKVGQARVVFDRLGDKNS-VSWTAMLSAYCQNKEYEAVFELV 358
+ SLL MY + +A +F L S V WT M+S + QN YE +
Sbjct: 661 SSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFY 720
Query: 359 RE---RGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKC 414
+E GV D F TVLR CS ++++ G+ +H D + + L+D+YAKC
Sbjct: 721 KEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKC 780
Query: 415 GCVDFAQRLFLSMEVR-NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGV 473
G + + ++F M R N ++WN++I G A+NG + L++F+ M + + PD ITF+GV
Sbjct: 781 GDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGV 840
Query: 474 LFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRY 533
L ACSH G V +GR+ F +M+ +YGI+ V+H CM+DLLGR ++EA+ +E + +
Sbjct: 841 LTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKP 900
Query: 534 DHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRK 593
D LW+ LLGAC D + E A K+IELEP +YVLL NIY + G W A +RK
Sbjct: 901 DARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRK 960
Query: 594 LMEDRGVKKLPGKSWIGSENQ 614
+M DRGVKK+PG SWI E +
Sbjct: 961 VMRDRGVKKVPGYSWIDVEQR 981
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 241/515 (46%), Gaps = 73/515 (14%)
Query: 83 GTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYT 142
G +H+ +L GI S+ +GN+++ LY K + A+ FD L +D+ AW S++S Y+
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCA-QVSYAEKQFDFLE-KDVTAWNSMLSMYS 136
Query: 143 RAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTV 202
G+P L+ F + + + PN FT S V++ ++ ++ G +H +I G N+
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 203 ISSALVDMYGRNRAVRDALKLF-----------------------------------DES 227
ALVDMY + + DA ++F DE
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 228 PEPEDVVGWTAIISTLTRNDMFREALRLFVAM----------------HRGCGLVPDGF- 270
P D + + +I+T R ++A LF M RGC V +
Sbjct: 257 HRP-DHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYF 315
Query: 271 -------------TFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKC 317
T G++L+A + L G +HA+ + LG+ N+ V SSL+ MY KC
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375
Query: 318 GKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVS----DLYAFGTVL 373
K+ A VF+ L +KN V W AM+ Y N E V EL + S D + F ++L
Sbjct: 376 EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435
Query: 374 RACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQI 433
C+ + +G + H ++K +++ V +ALVD+YAKCG ++ A+++F M R+ +
Sbjct: 436 STCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV 495
Query: 434 TWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALM 493
TWN +IG Q+ +E +LF+ M G+ D L AC+H + +G++ L
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLS 555
Query: 494 VDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLEN 528
V + G+ + + +ID+ + +I++A + +
Sbjct: 556 V-KCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSS 589
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 10/235 (4%)
Query: 285 LRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSA 344
LR GK +H+K + LGI + ++++D+Y KC +V A FD L +K+ +W +MLS
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSM 134
Query: 345 YCQ----NKEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRD 400
Y K + L + + + F VL C+ V G+++HC ++ G R+
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 401 VIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIK 460
ALVD+YAKC + A+R+F + N + W + G + G E + +FE M
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 461 EGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGR 515
EG PD++ F+ V+ G + + R F M P V +N MI G+
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGK 304
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 24/219 (10%)
Query: 381 AVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIG 440
A+ +GK VH + + G + + +A+VDLYAKC V +A++ F +E ++ WN+M+
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLS 133
Query: 441 GLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIK 500
+ G+ +VL F + + + P+ TF VL C+ V+ GR+ M IK
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM-----IK 188
Query: 501 PGVEHYN----CMIDLLGRAEMIEEAESLLE-----NADCRYDHSLWAVLLGACTKCSDY 551
G+E + ++D+ + + I +A + E N C W L K
Sbjct: 189 MGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVC------WTCLFSGYVKAGLP 242
Query: 552 VTAERVARKMIE--LEPDFHLSYVLLGNIYRAVGRWNDA 588
A V +M + PD HL++V + N Y +G+ DA
Sbjct: 243 EEAVLVFERMRDEGHRPD-HLAFVTVINTYIRLGKLKDA 280
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 193/541 (35%), Positives = 302/541 (55%), Gaps = 11/541 (2%)
Query: 83 GTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYT 142
G +H +K+G+ V NSL+ LYLK G ++ +A+ LFD V+ ++ W S+IS Y
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCG-NVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 143 RAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTV 202
G + +L +F M + + + +SVI + L++L LH V+ GF +
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 203 ISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRG 262
I +AL+ Y + A+ DAL+LF E +VV WTA+IS +ND EA+ LF M R
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 263 CGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQ 322
G+ P+ FT+ +L A + E+HA+VV + V ++LLD Y K GKV +
Sbjct: 392 -GVRPNEFTYSVILTALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEE 446
Query: 323 ARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRER---GVS-DLYAFGTVLRACSG 378
A VF + DK+ V+W+AML+ Y Q E EA ++ E G+ + + F ++L C+
Sbjct: 447 AAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAA 506
Query: 379 VAAVM-LGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNA 437
A M GK+ H ++ + V SAL+ +YAK G ++ A+ +F ++ ++WN+
Sbjct: 507 TNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNS 566
Query: 438 MIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEY 497
MI G AQ+G+ + L++F++M K ++ D +TFIGV AC+H GLV+EG +YF +MV +
Sbjct: 567 MISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDC 626
Query: 498 GIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERV 557
I P EH +CM+DL RA +E+A ++EN ++W +L AC
Sbjct: 627 KIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLA 686
Query: 558 ARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQKGS 617
A K+I ++P+ +YVLL N+Y G W + ++RKLM +R VKK PG SWI +N+ S
Sbjct: 687 AEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYS 746
Query: 618 L 618
Sbjct: 747 F 747
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 142/499 (28%), Positives = 254/499 (50%), Gaps = 25/499 (5%)
Query: 40 KDGSLRQALHL-LNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSD 98
+DG ++A L LN + ++ + +++S+L+ L G LH +K G D
Sbjct: 70 RDGRTQEAKRLFLNIHRLGMEMDCS--IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDD 127
Query: 99 RFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQML 158
VG SL+ Y+K G + + +FD + R+++ WT+LIS Y R L LF +M
Sbjct: 128 VSVGTSLVDTYMK-GSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQ 186
Query: 159 DLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVR 218
+ +PN+FT ++ + ++ G +H +V+ G +S++L+++Y + VR
Sbjct: 187 NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVR 246
Query: 219 DALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAA 278
A LFD++ E + VV W ++IS N + EAL +F +M + + +F +++
Sbjct: 247 KARILFDKT-EVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSES-SFASVIKL 304
Query: 279 CANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLG-DKNSVS 337
CANL LR ++LH VV G + + ++L+ Y KC + A +F +G N VS
Sbjct: 305 CANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVS 364
Query: 338 WTAMLSAYCQNKEYEAVFELVRE---RGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYV 393
WTAM+S + QN E +L E +GV + + + +L A V+ EVH Q V
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL----PVISPSEVHAQVV 420
Query: 394 RKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLE 453
+ R V +AL+D Y K G V+ A ++F ++ ++ + W+AM+ G AQ G ++
Sbjct: 421 KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIK 480
Query: 454 LFEDMIKEGMEPDYITFIGVLFACSHTGL-VDEGRRYFALMVDEYGIKPGVEHYNC---- 508
+F ++ K G++P+ TF +L C+ T + +G+++ + IK ++ C
Sbjct: 481 MFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG-----FAIKSRLDSSLCVSSA 535
Query: 509 MIDLLGRAEMIEEAESLLE 527
++ + + IE AE + +
Sbjct: 536 LLTMYAKKGNIESAEEVFK 554
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/366 (33%), Positives = 193/366 (52%), Gaps = 7/366 (1%)
Query: 116 LPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITA 175
L A LFD RD ++ SL+ ++R GR + +LF + L ME + SSV+
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 176 ASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVG 235
++ L D G LH I GF + + ++LVD Y + +D K+FDE E +VV
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE-RNVVT 161
Query: 236 WTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV 295
WT +IS RN M E L LF+ M G P+ FTF L A G +G ++H V
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNE-GTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220
Query: 296 VGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNK---EYE 352
V G+ + V +SL+++Y KCG V +AR++FD+ K+ V+W +M+S Y N E
Sbjct: 221 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL 280
Query: 353 AVFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLY 411
+F +R V +F +V++ C+ + + +++HC V+ G D + +AL+ Y
Sbjct: 281 GMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAY 340
Query: 412 AKCGCVDFAQRLFLSME-VRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITF 470
+KC + A RLF + V N ++W AMI G QN E ++LF +M ++G+ P+ T+
Sbjct: 341 SKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY 400
Query: 471 IGVLFA 476
+L A
Sbjct: 401 SVILTA 406
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 5/215 (2%)
Query: 322 QARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRERGVS-DLYAFGTVLRACS 377
A +FD+ ++ S+ ++L + ++ +E + +F + G+ D F +VL+ +
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 378 GVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNA 437
+ + G+++HCQ ++ G DV V ++LVD Y K +++F M+ RN +TW
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 438 MIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEY 497
+I G A+N EVL LF M EG +P+ TF L + G+ G + ++V
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN- 223
Query: 498 GIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCR 532
G+ + N +I+L + + +A L + + +
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK 258
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 328 bits (841), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 194/564 (34%), Positives = 317/564 (56%), Gaps = 9/564 (1%)
Query: 61 NLKPVLY--ASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQ 118
+++PV+Y LL+ C + G +H +KSG D F L +Y K + +
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKC-RQVNE 188
Query: 119 AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASK 178
A+ +FD + RD+++W ++++ Y++ G +L++ M + +++P+ TI SV+ A S
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248
Query: 179 LRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTA 238
LR +++G +H + GF S IS+ALVDMY + ++ A +LFD E +VV W +
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE-RNVVSWNS 307
Query: 239 IISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGL 298
+I +N+ +EA+ +F M G+ P + L ACA+LG L +G+ +H V L
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLDE-GVKPTDVSVMGALHACADLGDLERGRFIHKLSVEL 366
Query: 299 GICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN-KEYEAV--F 355
G+ NV V +SL+ MY KC +V A +F +L + VSW AM+ + QN + +A+ F
Sbjct: 367 GLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYF 426
Query: 356 ELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKC 414
+R R V D + + +V+ A + ++ K +H +R ++V V +ALVD+YAKC
Sbjct: 427 SQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKC 486
Query: 415 GCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVL 474
G + A+ +F M R+ TWNAMI G +G G LELFE+M K ++P+ +TF+ V+
Sbjct: 487 GAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVI 546
Query: 475 FACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYD 534
ACSH+GLV+ G + F +M + Y I+ ++HY M+DLLGRA + EA + +
Sbjct: 547 SACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPA 606
Query: 535 HSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKL 594
+++ +LGAC + AE+ A ++ EL PD +VLL NIYRA W ++R
Sbjct: 607 VNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVS 666
Query: 595 MEDRGVKKLPGKSWIGSENQKGSL 618
M +G++K PG S + +N+ S
Sbjct: 667 MLRQGLRKTPGCSMVEIKNEVHSF 690
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 219/425 (51%), Gaps = 12/425 (2%)
Query: 68 ASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLA 127
A LL+ C+ L K+G++ + F L++L+ + G + +A +F+ +
Sbjct: 41 ALLLERCSSLKELRQILPL---VFKNGLYQEHFFQTKLVSLFCRYGS-VDEAARVFEPID 96
Query: 128 VRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGAC 187
+ + + +++ + + +LQ F +M D+EP + + ++ +L +G
Sbjct: 97 SKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKE 156
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRND 247
+H +++ GF + + L +MY + R V +A K+FD PE D+V W I++ ++N
Sbjct: 157 IHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPE-RDLVSWNTIVAGYSQNG 215
Query: 248 MFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVE 307
M R AL + +M L P T ++L A + L + GKE+H + G V +
Sbjct: 216 MARMALEMVKSMCEE-NLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS 274
Query: 308 SSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRERGV- 363
++L+DMY KCG + AR +FD + ++N VSW +M+ AY QN KE +F+ + + GV
Sbjct: 275 TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVK 334
Query: 364 -SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQR 422
+D+ G L AC+ + + G+ +H V G R+V V ++L+ +Y KC VD A
Sbjct: 335 PTDVSVMGA-LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAAS 393
Query: 423 LFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGL 482
+F ++ R ++WNAMI G AQNGR + L F M ++PD T++ V+ A + +
Sbjct: 394 MFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSI 453
Query: 483 VDEGR 487
+
Sbjct: 454 THHAK 458
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 192/552 (34%), Positives = 294/552 (53%), Gaps = 10/552 (1%)
Query: 70 LLQTCTKTSSFLHGTTLHAHALKS-GIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAV 128
LL+ SS G +HA +K+ F+ N L+ +Y KL H A+ +
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLD-HPESARLVLRLTPA 70
Query: 129 RDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACL 188
R++++WTSLIS + G +L F +M + PN FT A + LR G +
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
Query: 189 HAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDM 248
HA+ + G + + + DMY + R DA KLFDE PE ++ W A IS +
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPE-RNLETWNAFISNSVTDGR 189
Query: 249 FREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVES 308
REA+ F+ R G P+ TF L AC++ L G +LH V+ G +V V +
Sbjct: 190 PREAIEAFIEFRRIDGH-PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 309 SLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYE--AVFELVRERGVSDL 366
L+D YGKC ++ + ++F +G KN+VSW ++++AY QN E E +V L + + +
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET 308
Query: 367 YAF--GTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLF 424
F +VL AC+G+A + LG+ +H V+ R + V SALVD+Y KCGC++ +++ F
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 425 LSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGM--EPDYITFIGVLFACSHTGL 482
M +N +T N++IGG A G+ L LFE+M G P+Y+TF+ +L ACS G
Sbjct: 369 DEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGA 428
Query: 483 VDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLL 542
V+ G + F M YGI+PG EHY+C++D+LGRA M+E A ++ + S+W L
Sbjct: 429 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488
Query: 543 GACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKK 602
AC A + +L+P ++VLL N + A GRW +A +R+ ++ G+KK
Sbjct: 489 NACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKK 548
Query: 603 LPGKSWIGSENQ 614
G SWI +NQ
Sbjct: 549 GAGYSWITVKNQ 560
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 151/310 (48%), Gaps = 12/310 (3%)
Query: 41 DGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLH---GTTLHAHALKSGIHS 97
DG R+A+ +D + + + + L C S +LH G LH L+SG +
Sbjct: 187 DGRPREAIEAF-IEFRRIDGHPNSITFCAFLNAC---SDWLHLNLGMQLHGLVLRSGFDT 242
Query: 98 DRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQM 157
D V N L+ Y K + ++ +F + ++ ++W SL++AY + + L+ +
Sbjct: 243 DVSVCNGLIDFYGKC-KQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRS 301
Query: 158 LDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAV 217
+E + F ISSV++A + + L LG +HA + + SALVDMYG+ +
Sbjct: 302 RKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCI 361
Query: 218 RDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAM-HRGCGLVPDGFTFGTLL 276
D+ + FDE PE +++V ++I AL LF M RGCG P+ TF +LL
Sbjct: 362 EDSEQAFDEMPE-KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLL 420
Query: 277 AACANLGWLRQGKELHAKVVG-LGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNS 335
+AC+ G + G ++ + GI S ++DM G+ G V +A ++ + +
Sbjct: 421 SACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPT 480
Query: 336 VS-WTAMLSA 344
+S W A+ +A
Sbjct: 481 ISVWGALQNA 490
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 368 AFGTVLRACSGVAAVMLGKEVHCQYVRK-GGWRDVIVESALVDLYAKCGCVDFAQRLFLS 426
A G +L+ +++ LG+ VH + V+ + + L+++Y+K + A+ +
Sbjct: 8 ALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRL 67
Query: 427 MEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEG 486
RN ++W ++I GLAQNG + L F +M +EG+ P+ TF A + L G
Sbjct: 68 TPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTG 127
Query: 487 RRYFALMV 494
++ AL V
Sbjct: 128 KQIHALAV 135
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 192/583 (32%), Positives = 315/583 (54%), Gaps = 18/583 (3%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
Y ++++ SS G +HA +K G SD +V NSL++LY+KLG A+ +F+ +
Sbjct: 133 YPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW-DAEKVFEEM 191
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
RDI++W S+IS Y G +SL LF +ML +P+ F+ S + A S + +G
Sbjct: 192 PERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGK 251
Query: 187 CLHAMVI-SRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTR 245
+H + SR + ++ ++++DMY + V A ++F+ + ++V W +I R
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQ-RNIVAWNVMIGCYAR 310
Query: 246 NDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV 305
N +A F M GL PD T LL A A L +G+ +H + G ++V
Sbjct: 311 NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMV 366
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERG--- 362
+E++L+DMYG+CG++ A V+FDR+ +KN +SW ++++AY QN + + EL +E
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSS 426
Query: 363 -VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
V D ++L A + ++ G+E+H V+ W + I+ ++LV +YA CG ++ A+
Sbjct: 427 LVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDAR 486
Query: 422 RLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG 481
+ F + +++ ++WN++I A +G G + LF +MI + P+ TF +L ACS +G
Sbjct: 487 KCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISG 546
Query: 482 LVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVL 541
+VDEG YF M EYGI PG+EHY CM+DL+GR A+ LE +W L
Sbjct: 547 MVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSL 606
Query: 542 LGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
L A D AE A ++ ++E D YVLL N+Y GRW D I+ LME +G+
Sbjct: 607 LNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGIS 666
Query: 602 KLPGKSWIGSENQ-----KGSLSGLANVNVFERSSVSS--IGE 637
+ +S + ++ + G S +A ++E V S +GE
Sbjct: 667 RTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGE 709
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 209/386 (54%), Gaps = 14/386 (3%)
Query: 116 LPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITA 175
+ A LFD + D W +I +T G I ++Q +S+M+ ++ + FT VI +
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 176 ASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVG 235
+ + L G +HAMVI GF S+ + ++L+ +Y + DA K+F+E PE D+V
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE-RDIVS 198
Query: 236 WTAIIS-TLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAK 294
W ++IS L D F +L LF M + CG PD F+ + L AC+++ + GKE+H
Sbjct: 199 WNSMISGYLALGDGF-SSLMLFKEMLK-CGFKPDRFSTMSALGACSHVYSPKMGKEIHCH 256
Query: 295 VVGLGI-CGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEA 353
V I G+V+V +S+LDMY K G+V A +F+ + +N V+W M+ Y +N
Sbjct: 257 AVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTD 316
Query: 354 VF----ELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALV 408
F ++ + G+ D+ +L A +A++ G+ +H +R+G +++E+AL+
Sbjct: 317 AFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALI 372
Query: 409 DLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYI 468
D+Y +CG + A+ +F M +N I+WN++I QNG+ LELF+++ + PD
Sbjct: 373 DMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDST 432
Query: 469 TFIGVLFACSHTGLVDEGRRYFALMV 494
T +L A + + + EGR A +V
Sbjct: 433 TIASILPAYAESLSLSEGREIHAYIV 458
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 174/323 (53%), Gaps = 13/323 (4%)
Query: 211 YGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGF 270
+ +R + DAL+LFDE + D W +I T ++ EA++ + M G+ D F
Sbjct: 74 FADSRLMEDALQLFDEMNKA-DAFLWNVMIKGFTSCGLYIEAVQFYSRMVFA-GVKADTF 131
Query: 271 TFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRL 330
T+ ++ + A + L +GK++HA V+ LG +V V +SL+ +Y K G A VF+ +
Sbjct: 132 TYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEM 191
Query: 331 GDKNSVSWTAMLSAYCQNKEYEAVFELVRER----GVSDLYAFGTVLRACSGVAAVMLGK 386
+++ VSW +M+S Y + + L +E D ++ + L ACS V + +GK
Sbjct: 192 PERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGK 251
Query: 387 EVHCQYVR-KGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQN 445
E+HC VR + DV+V ++++D+Y+K G V +A+R+F M RN + WN MIG A+N
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARN 311
Query: 446 GRGTEVLELFEDMIKE-GMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVE 504
GR T+ F+ M ++ G++PD IT I +L A + + EGR + G P +
Sbjct: 312 GRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRR-GFLPHMV 366
Query: 505 HYNCMIDLLGRAEMIEEAESLLE 527
+ID+ G ++ AE + +
Sbjct: 367 LETALIDMYGECGQLKSAEVIFD 389
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 128/262 (48%), Gaps = 18/262 (6%)
Query: 326 VFDRLGDKNSVSWTAMLSAYCQNKEY-EAV--FELVRERGV-SDLYAFGTVLRACSGVAA 381
+FD + ++ W M+ + Y EAV + + GV +D + + V+++ +G+++
Sbjct: 86 LFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISS 145
Query: 382 VMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGG 441
+ GK++H ++ G DV V ++L+ LY K GC A+++F M R+ ++WN+MI G
Sbjct: 146 LEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISG 205
Query: 442 LAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKP 501
G G L LF++M+K G +PD + + L ACSH G+ + + ++
Sbjct: 206 YLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE-----IHCHAVRS 260
Query: 502 GVEHYNCMI-----DLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAER 556
+E + M+ D+ + + AE + N + + W V++G + A
Sbjct: 261 RIETGDVMVMTSILDMYSKYGEVSYAERIF-NGMIQRNIVAWNVMIGCYARNGRVTDAFL 319
Query: 557 VARKMIE---LEPDFHLSYVLL 575
+KM E L+PD S LL
Sbjct: 320 CFQKMSEQNGLQPDVITSINLL 341
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 192/596 (32%), Positives = 324/596 (54%), Gaps = 17/596 (2%)
Query: 30 STDSEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLY--ASLLQTCTKTSSFLHGTTLH 87
S +S I + ++G + + ++ + ++ P Y A + + + S G H
Sbjct: 82 SWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAH 141
Query: 88 AHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRP 147
A +K D +V SL+ +Y K G + +F + R+ W++++S Y GR
Sbjct: 142 ALVVKMSSFGDIYVDTSLVGMYCKAGL-VEDGLKVFAYMPERNTYTWSTMVSGYATRGRV 200
Query: 148 INSLQLFSQMLDLDME--PNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISS 205
++++F+ L E + + ++V+++ + + LG +H + I G +S+
Sbjct: 201 EEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSN 260
Query: 206 ALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGL 265
ALV MY + ++ +A K+FD S + + W+A+++ ++N EA++LF M G+
Sbjct: 261 ALVTMYSKCESLNEACKMFDSSGDRNSIT-WSAMVTGYSQNGESLEAVKLFSRMFSA-GI 318
Query: 266 VPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARV 325
P +T +L AC+++ +L +GK+LH+ ++ LG ++ ++L+DMY K G + AR
Sbjct: 319 KPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARK 378
Query: 326 VFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLY----AFGTVLRACSGVAA 381
FD L +++ WT+++S Y QN + E L R + + +VL+ACS +A
Sbjct: 379 GFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLAT 438
Query: 382 VMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGG 441
+ LGK+VH ++ G +V + SAL +Y+KCG ++ +F ++ ++WNAMI G
Sbjct: 439 LELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISG 498
Query: 442 LAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKP 501
L+ NG+G E LELFE+M+ EGMEPD +TF+ ++ ACSH G V+ G YF +M D+ G+ P
Sbjct: 499 LSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDP 558
Query: 502 GVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACT---KCSDYVTAERVA 558
V+HY CM+DLL RA ++EA+ +E+A+ + LW +LL AC KC V A
Sbjct: 559 KVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYA---G 615
Query: 559 RKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
K++ L +YV L IY A+GR D + K M GV K G SWI +NQ
Sbjct: 616 EKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQ 671
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/445 (29%), Positives = 235/445 (52%), Gaps = 12/445 (2%)
Query: 52 NTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLK 111
+T QT L+P+ +L L ++ + + G +H +++G + N L+ Y K
Sbjct: 4 STFQTELNPHTSTLLKK--LTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAK 61
Query: 112 LGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINS---LQLFSQMLDLDMEPNAFT 168
G L +A ++F+++ +D+++W SLI+ Y++ G +S +QLF +M D+ PNA+T
Sbjct: 62 CGK-LAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYT 120
Query: 169 ISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESP 228
++ + A S L+ +G HA+V+ + + ++LV MY + V D LK+F P
Sbjct: 121 LAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP 180
Query: 229 EPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDG-FTFGTLLAACANLGWLRQ 287
E + W+ ++S EA+++F R D + F +L++ A ++
Sbjct: 181 E-RNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGL 239
Query: 288 GKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQ 347
G+++H + G+ G V + ++L+ MY KC + +A +FD GD+NS++W+AM++ Y Q
Sbjct: 240 GRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQ 299
Query: 348 NKE-YEAV--FELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIV 403
N E EAV F + G+ Y VL ACS + + GK++H ++ G R +
Sbjct: 300 NGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFA 359
Query: 404 ESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGM 463
+ALVD+YAK GC+ A++ F ++ R+ W ++I G QN E L L+ M G+
Sbjct: 360 TTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGI 419
Query: 464 EPDYITFIGVLFACSHTGLVDEGRR 488
P+ T VL ACS ++ G++
Sbjct: 420 IPNDPTMASVLKACSSLATLELGKQ 444
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 145/288 (50%), Gaps = 13/288 (4%)
Query: 285 LRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSA 344
L G+ +H +++ G + + L++ Y KCGK+ +A +F+ + K+ VSW ++++
Sbjct: 30 LVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITG 89
Query: 345 YCQN---KEYEAVFELVRERGVSDL----YAFGTVLRACSGVAAVMLGKEVHCQYVRKGG 397
Y QN V +L RE D+ Y + +A S + + +G++ H V+
Sbjct: 90 YSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSS 149
Query: 398 WRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFED 457
+ D+ V+++LV +Y K G V+ ++F M RN TW+ M+ G A GR E +++F
Sbjct: 150 FGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNL 209
Query: 458 MIK---EGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLG 514
++ EG + DY+ F VL + + T V GR+ + + G+ V N ++ +
Sbjct: 210 FLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKN-GLLGFVALSNALVTMYS 267
Query: 515 RAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMI 562
+ E + EA + +++ R + W+ ++ ++ + + A ++ +M
Sbjct: 268 KCESLNEACKMFDSSGDR-NSITWSAMVTGYSQNGESLEAVKLFSRMF 314
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 192/564 (34%), Positives = 319/564 (56%), Gaps = 18/564 (3%)
Query: 61 NLKPVLYASLLQTCTKTS-----SFLHGTTLHAHALKSGIHSDRF-VGNSLLTLYLKLGP 114
++ P Y LL + + S G +H H + +G+ +GN L+ +Y K G
Sbjct: 305 DVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364
Query: 115 HLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVIT 174
+ A+ +F + +D ++W S+I+ + G I +++ + M D+ P +FT+ S ++
Sbjct: 365 -IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLS 423
Query: 175 AASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVV 234
+ + L+ LG +H + G N +S+AL+ +Y + + K+F PE D V
Sbjct: 424 SCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPE-HDQV 482
Query: 235 GWTAIISTLTRNDM-FREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHA 293
W +II L R++ EA+ F+ R G + TF ++L+A ++L + GK++H
Sbjct: 483 SWNSIIGALARSERSLPEAVVCFLNAQRA-GQKLNRITFSSVLSAVSSLSFGELGKQIHG 541
Query: 294 KVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK-NSVSWTAMLSAYCQN---- 348
+ I E++L+ YGKCG++ +F R+ ++ ++V+W +M+S Y N
Sbjct: 542 LALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLA 601
Query: 349 KEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALV 408
K + V+ +++ D + + TVL A + VA + G EVH VR DV+V SALV
Sbjct: 602 KALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALV 661
Query: 409 DLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGM-EPDY 467
D+Y+KCG +D+A R F +M VRN +WN+MI G A++G+G E L+LFE M +G PD+
Sbjct: 662 DMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDH 721
Query: 468 ITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLE 527
+TF+GVL ACSH GL++EG ++F M D YG+ P +EH++CM D+LGRA +++ E +E
Sbjct: 722 VTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIE 781
Query: 528 NADCRYDHSLWAVLLGACTKCSDYVT--AERVARKMIELEPDFHLSYVLLGNIYRAVGRW 585
+ + +W +LGAC + + ++ A + +LEP+ ++YVLLGN+Y A GRW
Sbjct: 782 KMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRW 841
Query: 586 NDAMEIRKLMEDRGVKKLPGKSWI 609
D ++ RK M+D VKK G SW+
Sbjct: 842 EDLVKARKKMKDADVKKEAGYSWV 865
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 131/510 (25%), Positives = 248/510 (48%), Gaps = 25/510 (4%)
Query: 67 YASLLQTCTKTSS--FLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFD 124
+ S+L+ C + S L G +H K D V N L+++Y K + A F
Sbjct: 105 FVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFG 164
Query: 125 SLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLR--DL 182
+ V++ ++W S+IS Y++AG ++ ++FS M P +T S++T A L D+
Sbjct: 165 DIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDV 224
Query: 183 ALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIST 242
L + + G ++ + S LV + ++ ++ A K+F++ E + V ++
Sbjct: 225 RLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQM-ETRNAVTLNGLMVG 283
Query: 243 LTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGW-----LRQGKELHAKVVG 297
L R EA +LF+ M+ + P+ + LL++ L++G+E+H V+
Sbjct: 284 LVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSFPEYSLAEEVGLKKGREVHGHVIT 341
Query: 298 LGICGNVV-VESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFE 356
G+ +V + + L++MY KCG + AR VF + DK+SVSW +M++ QN + E
Sbjct: 342 TGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVE 401
Query: 357 LVRERGVSDL----YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYA 412
+ D+ + + L +C+ + LG+++H + ++ G +V V +AL+ LYA
Sbjct: 402 RYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYA 461
Query: 413 KCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRG-TEVLELFEDMIKEGMEPDYITFI 471
+ G ++ +++F SM +Q++WN++IG LA++ R E + F + + G + + ITF
Sbjct: 462 ETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFS 521
Query: 472 GVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADC 531
VL A S + G++ L + I N +I G+ ++ E +
Sbjct: 522 SVLSAVSSLSFGELGKQIHGLALKN-NIADEATTENALIACYGKCGEMDGCEKIFSRMAE 580
Query: 532 RYDHSLWAVLLGACTKCSDYVTAERVARKM 561
R D+ W ++ S Y+ E +A+ +
Sbjct: 581 RRDNVTWNSMI------SGYIHNELLAKAL 604
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 120/501 (23%), Positives = 238/501 (47%), Gaps = 33/501 (6%)
Query: 86 LHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAG 145
H+ K+ + D ++ N+L+ YL+ G + A+ +FD + +R+ ++W ++S Y+R G
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSV-SARKVFDEMPLRNCVSWACIVSGYSRNG 81
Query: 146 RPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLAL--GACLHAMVISRGFHSNTVI 203
+L M+ + N + SV+ A ++ + + G +H ++ + + V+
Sbjct: 82 EHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVV 141
Query: 204 SSALVDMYGRN-RAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRG 262
S+ L+ MY + +V AL F + E ++ V W +IIS ++ R A R+F +M
Sbjct: 142 SNVLISMYWKCIGSVGYALCAFGD-IEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 263 CGLVPDGFTFGTLLAACANLGW--LRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKV 320
G P +TFG+L+ +L +R +++ + G+ ++ V S L+ + K G +
Sbjct: 201 -GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 321 GQARVVFDRLGDKNSVSWTAMLSAYCQNK----------EYEAVFELVRERGVSDLYAFG 370
AR VF+++ +N+V+ ++ + K + ++ ++ E V L +F
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFP 319
Query: 371 TVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIV--ESALVDLYAKCGCVDFAQRLFLSME 428
+ + + G+EVH +V G D +V + LV++YAKCG + A+R+F M
Sbjct: 320 EY--SLAEEVGLKKGREVH-GHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT 376
Query: 429 VRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRR 488
++ ++WN+MI GL QNG E +E ++ M + + P T I L +C+ G++
Sbjct: 377 DKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQ 436
Query: 489 YFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKC 548
+ + GI V N ++ L + E + + +D W ++GA +
Sbjct: 437 IHGESL-KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGALARS 494
Query: 549 SD--------YVTAERVARKM 561
++ A+R +K+
Sbjct: 495 ERSLPEAVVCFLNAQRAGQKL 515
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 326 bits (835), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 193/605 (31%), Positives = 313/605 (51%), Gaps = 57/605 (9%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
+ + + C + SS G + HA +L +G S+ FVGN+L+ +Y + L A+ +FD +
Sbjct: 130 FPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRS-LSDARKVFDEM 188
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQML-DLDMEPNAFTISSVITAASKLRDLALG 185
+V D+++W S+I +Y + G+P +L++FS+M + P+ T+ +V+ + L +LG
Sbjct: 189 SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLG 248
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTR 245
LH ++ N + + LVDMY + + +A +F +DVV W A+++ ++
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM-SVKDVVSWNAMVAGYSQ 307
Query: 246 NDMFREALRLFVAMH--------------------RG--------------CGLVPDGFT 271
F +A+RLF M RG G+ P+ T
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Query: 272 FGTLLAACANLGWLRQGKELHAKVVGLGIC--------GNVVVESSLLDMYGKCGKVGQA 323
++L+ CA++G L GKE+H + I N+V+ + L+DMY KC KV A
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI-NQLIDMYAKCKKVDTA 426
Query: 324 RVVFDRLGDK--NSVSWTAMLSAYCQNKEYEAVFELVRERGVSDL------YAFGTVLRA 375
R +FD L K + V+WT M+ Y Q+ + EL+ E D + L A
Sbjct: 427 RAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVA 486
Query: 376 CSGVAAVMLGKEVHCQYVR-KGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQIT 434
C+ +AA+ +GK++H +R + + V + L+D+YAKCG + A+ +F +M +N++T
Sbjct: 487 CASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVT 546
Query: 435 WNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMV 494
W +++ G +G G E L +F++M + G + D +T + VL+ACSH+G++D+G YF M
Sbjct: 547 WTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMK 606
Query: 495 DEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTA 554
+G+ PG EHY C++DLLGRA + A L+E +W L C
Sbjct: 607 TVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELG 666
Query: 555 ERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
E A K+ EL + SY LL N+Y GRW D IR LM +GVKK PG SW+ E
Sbjct: 667 EYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWV--EGI 724
Query: 615 KGSLS 619
KG+ +
Sbjct: 725 KGTTT 729
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 156/519 (30%), Positives = 239/519 (46%), Gaps = 62/519 (11%)
Query: 64 PVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLF 123
P + + C S +H L GI + + L++ Y+ +G L A +L
Sbjct: 28 PEITPPFIHKCKTISQV---KLIHQKLLSFGILTLNLTSH-LISTYISVGC-LSHAVSLL 82
Query: 124 DSLAVRD--IIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRD 181
D + W SLI +Y G L LF M L P+ +T V A ++
Sbjct: 83 RRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISS 142
Query: 182 LALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIS 241
+ G HA+ + GF SN + +ALV MY R R++ DA K+FDE DVV W +II
Sbjct: 143 VRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM-SVWDVVSWNSIIE 201
Query: 242 TLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGIC 301
+ + + AL +F M G PD T +L CA+LG GK+LH V +
Sbjct: 202 SYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMI 261
Query: 302 GNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYE---AVFELV 358
N+ V + L+DMY KCG + +A VF + K+ VSW AM++ Y Q +E +FE +
Sbjct: 262 QNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM 321
Query: 359 RERGVS-DLYAFG-----------------------------------TVLRACSGVAAV 382
+E + D+ + +VL C+ V A+
Sbjct: 322 QEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGAL 381
Query: 383 MLGKEVHCQYV------RKGGWRDV-IVESALVDLYAKCGCVDFAQRLF--LSMEVRNQI 433
M GKE+HC + RK G D +V + L+D+YAKC VD A+ +F LS + R+ +
Sbjct: 382 MHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVV 441
Query: 434 TWNAMIGGLAQNGRGTEVLELFEDMIKEGME--PDYITFIGVLFACSHTGLVDEGRRY-- 489
TW MIGG +Q+G + LEL +M +E + P+ T L AC+ + G++
Sbjct: 442 TWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHA 501
Query: 490 FALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLEN 528
+AL + + V NC+ID+ + I +A + +N
Sbjct: 502 YALRNQQNAVPLFVS--NCLIDMYAKCGSISDARLVFDN 538
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 219/485 (45%), Gaps = 57/485 (11%)
Query: 30 STDSEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAH 89
S +S I + K G + AL + + + ++L C + G LH
Sbjct: 195 SWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCF 254
Query: 90 ALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPIN 149
A+ S + + FVGN L+ +Y K G + +A T+F +++V+D+++W ++++ Y++ GR +
Sbjct: 255 AVTSEMIQNMFVGNCLVDMYAKCG-MMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFED 313
Query: 150 SLQLFS-----------------------------------QMLDLDMEPNAFTISSVIT 174
+++LF QML ++PN T+ SV++
Sbjct: 314 AVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLS 373
Query: 175 AASKLRDLALGACLHAMVI-------SRGFHSNTVISSALVDMYGRNRAVRDALKLFDE- 226
+ + L G +H I G ++ + L+DMY + + V A +FD
Sbjct: 374 GCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSL 433
Query: 227 SPEPEDVVGWTAIISTLTRNDMFREALRLFVAM-HRGCGLVPDGFTFGTLLAACANLGWL 285
SP+ DVV WT +I +++ +AL L M C P+ FT L ACA+L L
Sbjct: 434 SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAAL 493
Query: 286 RQGKELHAKVVGLGICGNVV---VESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAML 342
R GK++HA L N V V + L+DMY KCG + AR+VFD + KN V+WT+++
Sbjct: 494 RIGKQIHA--YALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLM 551
Query: 343 SAYCQN---KEYEAVFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGW 398
+ Y + +E +F+ +R G D VL ACS + G E + G
Sbjct: 552 TGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGV 611
Query: 399 RDVIVESA-LVDLYAKCGCVDFAQRLFLSMEVR-NQITWNAMIGGLAQNGRGTEVLELFE 456
A LVDL + G ++ A RL M + + W A + +G+ E+ E
Sbjct: 612 SPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGK-VELGEYAA 670
Query: 457 DMIKE 461
+ I E
Sbjct: 671 EKITE 675
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 136/287 (47%), Gaps = 12/287 (4%)
Query: 285 LRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRL--GDKNSVSWTAML 342
+ Q K +H K++ GI + + S L+ Y G + A + R D W +++
Sbjct: 41 ISQVKLIHQKLLSFGIL-TLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLI 99
Query: 343 SAY----CQNKEYEAVFELVRERG-VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGG 397
+Y C NK +F L+ D Y F V +AC +++V G+ H + G
Sbjct: 100 RSYGDNGCANKCL-YLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGF 158
Query: 398 WRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFED 457
+V V +ALV +Y++C + A+++F M V + ++WN++I A+ G+ LE+F
Sbjct: 159 ISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSR 218
Query: 458 MIKE-GMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRA 516
M E G PD IT + VL C+ G G++ V I+ + NC++D+ +
Sbjct: 219 MTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ-NMFVGNCLVDMYAKC 277
Query: 517 EMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIE 563
M++EA ++ N + D W ++ ++ + A R+ KM E
Sbjct: 278 GMMDEANTVFSNMSVK-DVVSWNAMVAGYSQIGRFEDAVRLFEKMQE 323
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 322 bits (826), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 178/525 (33%), Positives = 300/525 (57%), Gaps = 9/525 (1%)
Query: 101 VGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDL 160
+ +L+ Y + G + +A++LFD + RD++AWT++I+ Y + + + F +M+
Sbjct: 47 LATNLIVSYFEKG-LVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 161 DMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDA 220
PN FT+SSV+ + ++ LA GA +H +V+ G + + +A+++MY +A
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 221 LKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMH-RGCGLVPDGFTFGTLLAAC 279
L + ++ V WT +I+ T L+++ M + P T + A
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA--VRAS 223
Query: 280 ANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWT 339
A++ + GK++HA V+ G N+ V +S+LD+Y +CG + +A+ F + DK+ ++W
Sbjct: 224 ASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWN 283
Query: 340 AMLSAYCQNKEYEAV--FELVRERG-VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKG 396
++S ++ EA+ F+ +G V + Y F +++ AC+ +AA+ G+++H + R+G
Sbjct: 284 TLISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRG 343
Query: 397 GWRDVIVESALVDLYAKCGCVDFAQRLFLSM-EVRNQITWNAMIGGLAQNGRGTEVLELF 455
++V + +AL+D+YAKCG + +QR+F + + RN ++W +M+ G +G G E +ELF
Sbjct: 344 FNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELF 403
Query: 456 EDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGR 515
+ M+ G+ PD I F+ VL AC H GLV++G +YF +M EYGI P + YNC++DLLGR
Sbjct: 404 DKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGR 463
Query: 516 AEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERV-ARKMIELEPDFHLSYVL 574
A I EA L+E + D S W +LGAC R+ ARK++EL+P +YV+
Sbjct: 464 AGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVM 523
Query: 575 LGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQKGSLS 619
L IY A G+W D +RK+M G KK G SWI ENQ S +
Sbjct: 524 LSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFA 568
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 211/416 (50%), Gaps = 18/416 (4%)
Query: 68 ASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLA 127
+S+L++C +G +H +K G+ +V N+++ +Y + A +F +
Sbjct: 115 SSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIK 174
Query: 128 VRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGAC 187
V++ + WT+LI+ +T G I L+++ QML + E + I+ + A++ + + G
Sbjct: 175 VKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQ 234
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRND 247
+HA VI RGF SN + ++++D+Y R + +A F E E +D++ W +IS L R+D
Sbjct: 235 IHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEM-EDKDLITWNTLISELERSD 293
Query: 248 MFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVE 307
EAL +F G VP+ +TF +L+AACAN+ L G++LH ++ G NV +
Sbjct: 294 S-SEALLMFQRFESQ-GFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELA 351
Query: 308 SSLLDMYGKCGKVGQARVVFDRLGD-KNSVSWTAMLSAYCQN---KEYEAVFELVRERGV 363
++L+DMY KCG + ++ VF + D +N VSWT+M+ Y + E +F+ + G+
Sbjct: 352 NALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGI 411
Query: 364 -SDLYAFGTVLRACSGVAAVMLG-KEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
D F VL AC V G K + G D + + +VDL + G + A
Sbjct: 412 RPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAY 471
Query: 422 RLFLSMEVR-NQITWNAMIG--------GLAQNGRGTEVLELFEDMIKEGMEPDYI 468
L M + ++ TW A++G GL +V+EL M+ + YI
Sbjct: 472 ELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYI 527
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 176/346 (50%), Gaps = 9/346 (2%)
Query: 202 VISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHR 261
++++ L+ Y V +A LFDE P+ DVV WTA+I+ ++ A F M +
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPD-RDVVAWTAMITGYASSNYNARAWECFHEMVK 104
Query: 262 GCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVG 321
G P+ FT ++L +C N+ L G +H VV LG+ G++ V++++++MY C
Sbjct: 105 Q-GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTM 163
Query: 322 QAR-VVFDRLGDKNSVSWTAMLSAYCQNKE----YEAVFELVRERGVSDLYAFGTVLRAC 376
+A ++F + KN V+WT +++ + + + +++ E Y +RA
Sbjct: 164 EAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRAS 223
Query: 377 SGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWN 436
+ + +V GK++H +++G ++ V ++++DLY +CG + A+ F ME ++ ITWN
Sbjct: 224 ASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWN 283
Query: 437 AMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDE 496
+I L + +E L +F+ +G P+ TF ++ AC++ ++ G++ +
Sbjct: 284 TLISEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR 342
Query: 497 YGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLL 542
G VE N +ID+ + I +++ + R + W ++
Sbjct: 343 -GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMM 387
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 157/310 (50%), Gaps = 6/310 (1%)
Query: 59 DPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQ 118
+ + P ++ S G +HA +K G S+ V NS+L LY + G +L +
Sbjct: 208 NAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCG-YLSE 266
Query: 119 AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASK 178
A+ F + +D+I W +LIS R+ +L +F + PN +T +S++ A +
Sbjct: 267 AKHYFHEMEDKDLITWNTLISELERSDSS-EALLMFQRFESQGFVPNCYTFTSLVAACAN 325
Query: 179 LRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTA 238
+ L G LH + RGF+ N +++AL+DMY + + D+ ++F E + ++V WT+
Sbjct: 326 IAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTS 385
Query: 239 IISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQG-KELHAKVVG 297
++ + EA+ LF M G+ PD F +L+AC + G + +G K +
Sbjct: 386 MMIGYGSHGYGAEAVELFDKM-VSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESE 444
Query: 298 LGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK-NSVSWTAMLSAYCQNKEYEAVFE 356
GI + + + ++D+ G+ GK+G+A + +R+ K + +W A+L A C+ ++ +
Sbjct: 445 YGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGA-CKAHKHNGLIS 503
Query: 357 LVRERGVSDL 366
+ R V +L
Sbjct: 504 RLAARKVMEL 513
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Query: 402 IVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKE 461
I+ + L+ Y + G V+ A+ LF M R+ + W AMI G A + E F +M+K+
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 462 GMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEE 521
G P+ T VL +C + ++ G ++V + G++ + N M+++ + E
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVV-KLGMEGSLYVDNAMMNMYATCSVTME 164
Query: 522 AESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMI 562
A L+ + W L+ T D + ++ ++M+
Sbjct: 165 AACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQML 205
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 322 bits (826), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 185/583 (31%), Positives = 310/583 (53%), Gaps = 11/583 (1%)
Query: 58 LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLP 117
+ PN V + +L C G LH + SG+ + + NSLL++Y K G
Sbjct: 235 ISPN--AVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCG-RFD 291
Query: 118 QAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAAS 177
A LF ++ D + W +IS Y ++G SL F +M+ + P+A T SS++ + S
Sbjct: 292 DASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Query: 178 KLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWT 237
K +L +H ++ + ++SAL+D Y + R V A +F + DVV +T
Sbjct: 352 KFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQC-NSVDVVVFT 410
Query: 238 AIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVG 297
A+IS N ++ ++L +F + + + P+ T ++L L L+ G+ELH ++
Sbjct: 411 AMISGYLHNGLYIDSLEMFRWLVK-VKISPNEITLVSILPVIGILLALKLGRELHGFIIK 469
Query: 298 LGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFEL 357
G + +++DMY KCG++ A +F+RL ++ VSW +M++ Q+ A ++
Sbjct: 470 KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDI 529
Query: 358 VRERGVS----DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAK 413
R+ GVS D + L AC+ + + GK +H ++ DV ES L+D+YAK
Sbjct: 530 FRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAK 589
Query: 414 CGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMI-KEGMEPDYITFIG 472
CG + A +F +M+ +N ++WN++I +G+ + L LF +M+ K G+ PD ITF+
Sbjct: 590 CGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLE 649
Query: 473 VLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCR 532
++ +C H G VDEG R+F M ++YGI+P EHY C++DL GRA + EA +++
Sbjct: 650 IISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFP 709
Query: 533 YDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIR 592
D +W LLGAC + AE + K+++L+P YVL+ N + W ++R
Sbjct: 710 PDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVR 769
Query: 593 KLMEDRGVKKLPGKSWIGSENQKGSLSGLANVNVFERSSVSSI 635
LM++R V+K+PG SWI N++ L +VN E S + S+
Sbjct: 770 SLMKEREVQKIPGYSWI-EINKRTHLFVSGDVNHPESSHIYSL 811
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 141/579 (24%), Positives = 270/579 (46%), Gaps = 17/579 (2%)
Query: 32 DSEILQHCKDGSLRQALHL-LNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHA 90
+S I ++G L QAL + P++ + L++ C +F L
Sbjct: 107 NSIISSFVRNGLLNQALAFYFKMLCFGVSPDVST--FPCLVKACVALKNFKGIDFLSDTV 164
Query: 91 LKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINS 150
G+ + FV +SL+ YL+ G + LFD + +D + W +++ Y + G +
Sbjct: 165 SSLGMDCNEFVASSLIKAYLEYG-KIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSV 223
Query: 151 LQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDM 210
++ FS M + PNA T V++ + + LG LH +V+ G I ++L+ M
Sbjct: 224 IKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSM 283
Query: 211 YGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGF 270
Y + DA KLF D V W +IS ++ + E+L F M G++PD
Sbjct: 284 YSKCGRFDDASKLFRMMSR-ADTVTWNCMISGYVQSGLMEESLTFFYEMISS-GVLPDAI 341
Query: 271 TFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRL 330
TF +LL + + L K++H ++ I ++ + S+L+D Y KC V A+ +F +
Sbjct: 342 TFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQC 401
Query: 331 GDKNSVSWTAMLSAYCQNKEYEAVFE----LVRERGVSDLYAFGTVLRACSGVAAVMLGK 386
+ V +TAM+S Y N Y E LV+ + + ++L + A+ LG+
Sbjct: 402 NSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGR 461
Query: 387 EVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNG 446
E+H ++KG + A++D+YAKCG ++ A +F + R+ ++WN+MI AQ+
Sbjct: 462 ELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSD 521
Query: 447 RGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHY 506
+ +++F M G+ D ++ L AC++ G+ M+ ++ + V
Sbjct: 522 NPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMI-KHSLASDVYSE 580
Query: 507 NCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIE--- 563
+ +ID+ + ++ A ++ + + S W ++ AC + + +M+E
Sbjct: 581 STLIDMYAKCGNLKAAMNVFKTMKEKNIVS-WNSIIAACGNHGKLKDSLCLFHEMVEKSG 639
Query: 564 LEPDFHLSYVLLGNIYRAVGRWNDAME-IRKLMEDRGVK 601
+ PD ++++ + + VG ++ + R + ED G++
Sbjct: 640 IRPD-QITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQ 677
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/523 (25%), Positives = 234/523 (44%), Gaps = 13/523 (2%)
Query: 45 RQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNS 104
+++L L N+S+ L+ + P + LLQ C+ + G +HA + + I D +
Sbjct: 18 KKSLPLRNSSRF-LEETI-PRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDER 75
Query: 105 LLTLYLKLGPHLPQAQTLFDSLAVR--DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDM 162
+L +Y G +F L +R I W S+IS++ R G +L + +ML +
Sbjct: 76 ILGMYAMCG-SFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGV 134
Query: 163 EPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALK 222
P+ T ++ A L++ L V S G N ++S+L+ Y + K
Sbjct: 135 SPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSK 194
Query: 223 LFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANL 282
LFD + +D V W +++ + ++ F M R + P+ TF +L+ CA+
Sbjct: 195 LFDRVLQ-KDCVIWNVMLNGYAKCGALDSVIKGFSVM-RMDQISPNAVTFDCVLSVCASK 252
Query: 283 GWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAML 342
+ G +LH VV G+ +++SLL MY KCG+ A +F + ++V+W M+
Sbjct: 253 LLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMI 312
Query: 343 SAYCQNKEYEA----VFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGW 398
S Y Q+ E +E++ + D F ++L + S + K++HC +R
Sbjct: 313 SGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSIS 372
Query: 399 RDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDM 458
D+ + SAL+D Y KC V AQ +F + + + AMI G NG + LE+F +
Sbjct: 373 LDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWL 432
Query: 459 IKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEM 518
+K + P+ IT + +L + GR ++ + G +ID+ +
Sbjct: 433 VKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGR 491
Query: 519 IEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKM 561
+ A + E R D W ++ C + + A + R+M
Sbjct: 492 MNLAYEIFERLSKR-DIVSWNSMITRCAQSDNPSAAIDIFRQM 533
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 320 bits (819), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 200/605 (33%), Positives = 321/605 (53%), Gaps = 22/605 (3%)
Query: 30 STDSEILQHCKDGSLRQALHLLNTSQTTLDPNLK--PVLYASLLQTCTKTSSFLHGTTLH 87
S +S I + + G QA+ L ++ + NLK YA L C + G LH
Sbjct: 115 SFNSLISGYTQMGFYEQAMELFLEAR---EANLKLDKFTYAGALGFCGERCDLDLGELLH 171
Query: 88 AHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRP 147
+ +G+ F+ N L+ +Y K G L QA +LFD RD ++W SLIS Y R G
Sbjct: 172 GLVVVNGLSQQVFLINVLIDMYSKCGK-LDQAMSLFDRCDERDQVSWNSLISGYVRVGAA 230
Query: 148 INSLQLFSQMLDLDMEPNAFTISSVITAAS-KLRD--LALGACLHAMVISRGFHSNTVIS 204
L L ++M + + + SV+ A L + + G +H G + V+
Sbjct: 231 EEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVR 290
Query: 205 SALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMF-----REALRLFVAM 259
+AL+DMY +N ++++A+KLF P ++VV + A+IS + D EA +LF+ M
Sbjct: 291 TALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDM 349
Query: 260 HRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGK 319
R GL P TF +L AC+ L G+++HA + + + S+L+++Y G
Sbjct: 350 QRR-GLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGS 408
Query: 320 VGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDL----YAFGTVLRA 375
F ++ SWT+M+ + QN++ E+ F+L R+ S + Y ++ A
Sbjct: 409 TEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSA 468
Query: 376 CSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITW 435
C+ AA+ G+++ ++ G V+++ + +YAK G + A ++F+ ++ + T+
Sbjct: 469 CADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATY 528
Query: 436 NAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVD 495
+AMI LAQ+G E L +FE M G++P+ F+GVL AC H GLV +G +YF M +
Sbjct: 529 SAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKN 588
Query: 496 EYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSL-WAVLLGACTKCSDYVTA 554
+Y I P +H+ C++DLLGR + +AE+L+ ++ + DH + W LL +C D V
Sbjct: 589 DYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQ-DHPVTWRALLSSCRVYKDSVIG 647
Query: 555 ERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
+RVA +++ELEP+ SYVLL NIY G + A E+R+LM DRGVKK P SWI NQ
Sbjct: 648 KRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQ 707
Query: 615 KGSLS 619
S +
Sbjct: 708 THSFA 712
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 223/452 (49%), Gaps = 20/452 (4%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
Y L QT K+ S + G H H +KS ++ ++ N+LL +Y K L A+ LFD +
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKC-RELGFARQLFDRM 108
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
R+II++ SLIS YT+ G +++LF + + +++ + FT + + + DL LG
Sbjct: 109 PERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGE 168
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
LH +V+ G + + L+DMY + + A+ LFD E D V W ++IS R
Sbjct: 169 LLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE-RDQVSWNSLISGYVRV 227
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACA---NLGWLRQGKELHAKVVGLGICGN 303
E L L MHR GL + G++L AC N G++ +G +H LG+ +
Sbjct: 228 GAAEEPLNLLAKMHRD-GLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFD 286
Query: 304 VVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQ--------NKEYEAVF 355
+VV ++LLDMY K G + +A +F + KN V++ AM+S + Q + E +F
Sbjct: 287 IVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLF 346
Query: 356 ELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKC 414
++ RG+ F VL+ACS + G+++H + D + SAL++LYA
Sbjct: 347 MDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALM 406
Query: 415 GCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVL 474
G + + F S ++ +W +MI QN + +LF + + P+ T ++
Sbjct: 407 GSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMM 466
Query: 475 FACSHTGLVDEGRRYFALMVDEYGIKPGVEHY 506
AC+ + G + + Y IK G++ +
Sbjct: 467 SACADFAALSSGEQ-----IQGYAIKSGIDAF 493
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 132/270 (48%), Gaps = 16/270 (5%)
Query: 268 DGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVF 327
D + L A G + GK H ++ + + + ++LL+MY KC ++G AR +F
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 328 DRLGDKNSVSWTAMLSAYCQNKEYEAVFEL---VRERGVS-DLYAFGTVLRACSGVAAVM 383
DR+ ++N +S+ +++S Y Q YE EL RE + D + + L C +
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLD 165
Query: 384 LGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLA 443
LG+ +H V G + V + + L+D+Y+KCG +D A LF + R+Q++WN++I G
Sbjct: 166 LGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYV 225
Query: 444 QNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACS---HTGLVDEGRRYFALMVDEYGIK 500
+ G E L L M ++G+ VL AC + G +++G + + Y K
Sbjct: 226 RVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKG-----MAIHCYTAK 280
Query: 501 PGVEH----YNCMIDLLGRAEMIEEAESLL 526
G+E ++D+ + ++EA L
Sbjct: 281 LGMEFDIVVRTALLDMYAKNGSLKEAIKLF 310
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 319 bits (817), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 180/549 (32%), Positives = 304/549 (55%), Gaps = 11/549 (2%)
Query: 65 VLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFD 124
++++ L+ CT+ +G +H +K D V LL +Y K G + A +F+
Sbjct: 143 IVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCG-EIKSAHKVFN 200
Query: 125 SLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLAL 184
+ +R+++ WTS+I+ Y + L LF++M + ++ N +T ++I A +KL L
Sbjct: 201 DITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQ 260
Query: 185 GACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLT 244
G H ++ G ++ + ++L+DMY + + +A ++F+E D+V WTA+I T
Sbjct: 261 GKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHV-DLVMWTAMIVGYT 319
Query: 245 RNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNV 304
N EAL LF M +G + P+ T ++L+ C + L G+ +H + +GI +
Sbjct: 320 HNGSVNEALSLFQKM-KGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDT 377
Query: 305 VVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKE-YEAVFELVR---E 360
V ++L+ MY KC + A+ VF+ +K+ V+W +++S + QN +EA+F R E
Sbjct: 378 NVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSE 437
Query: 361 RGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKG--GWRDVIVESALVDLYAKCGCVD 418
+ ++ AC+ + ++ +G +H V+ G V V +AL+D YAKCG
Sbjct: 438 SVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQ 497
Query: 419 FAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACS 478
A+ +F ++E +N ITW+AMIGG + G LELFE+M+K+ +P+ TF +L AC
Sbjct: 498 SARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACG 557
Query: 479 HTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLW 538
HTG+V+EG++YF+ M +Y P +HY CM+D+L RA +E+A ++E + D +
Sbjct: 558 HTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCF 617
Query: 539 AVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDR 598
L C S + E V +KM++L PD YVL+ N+Y + GRWN A E+R LM+ R
Sbjct: 618 GAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQR 677
Query: 599 GVKKLPGKS 607
G+ K+ G S
Sbjct: 678 GLSKIAGHS 686
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 168/337 (49%), Gaps = 15/337 (4%)
Query: 170 SSVITAASKLRDLALGACL--------HAMVISRGFHSNTVISSALVDMYGRNRAVRDAL 221
SS+ AAS L L C H ++ G + I++ LV +YG +DA
Sbjct: 37 SSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDAR 96
Query: 222 KLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACAN 281
+FD+ PEP D W ++ N E ++L+ + + G D F L AC
Sbjct: 97 LVFDQIPEP-DFYLWKVMLRCYCLNKESVEVVKLYDLLMKH-GFRYDDIVFSKALKACTE 154
Query: 282 LGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAM 341
L L GK++H ++V + NVV+ + LLDMY KCG++ A VF+ + +N V WT+M
Sbjct: 155 LQDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSM 213
Query: 342 LSAYCQN---KEYEAVFELVRERGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGG 397
++ Y +N +E +F +RE V + Y +GT++ AC+ ++A+ GK H V+ G
Sbjct: 214 IAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGI 273
Query: 398 WRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFED 457
+ ++L+D+Y KCG + A+R+F + + W AMI G NG E L LF+
Sbjct: 274 ELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQK 333
Query: 458 MIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMV 494
M ++P+ +T VL C ++ GR L +
Sbjct: 334 MKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSI 370
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 154/303 (50%), Gaps = 20/303 (6%)
Query: 275 LLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKN 334
LL+ C N+ LRQ H + G G+ G++ + + L+ +YG G AR+VFD++ + +
Sbjct: 50 LLSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 335 SVSWTAMLSAYCQNKEYEAV---FELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHC 390
W ML YC NKE V ++L+ + G D F L+AC+ + + GK++HC
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 391 QYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTE 450
Q V+ + +V++ + L+D+YAKCG + A ++F + +RN + W +MI G +N E
Sbjct: 167 QLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEE 225
Query: 451 VLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMI 510
L LF M + + + T+ ++ AC+ + +G+ + +V K G+E +C++
Sbjct: 226 GLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLV-----KSGIELSSCLV 280
Query: 511 ----DLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKM--IEL 564
D+ + I A + N D +W ++ T A + +KM +E+
Sbjct: 281 TSLLDMYVKCGDISNARRVF-NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEI 339
Query: 565 EPD 567
+P+
Sbjct: 340 KPN 342
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 318 bits (816), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 186/601 (30%), Positives = 318/601 (52%), Gaps = 44/601 (7%)
Query: 48 LHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLT 107
H L +S +++ SLL C S +HA +K G+H+ + + L+
Sbjct: 17 FHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSL---RIIHAQMIKIGLHNTNYALSKLIE 73
Query: 108 LYLKLGPH---LPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEP 164
+ L PH LP A ++F ++ +++ W ++ + + P+++L+L+ M+ L + P
Sbjct: 74 FCI-LSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLP 132
Query: 165 NAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLF 224
N++T V+ + +K + G +H V+ G + + ++L+ MY +N + DA K+F
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192
Query: 225 DESPEPE------------------------------DVVGWTAIISTLTRNDMFREALR 254
D+SP + DVV W A+IS ++EAL
Sbjct: 193 DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 252
Query: 255 LFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMY 314
LF M + + PD T T+++ACA G + G+++H + G N+ + ++L+D+Y
Sbjct: 253 LFKDMMK-TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLY 311
Query: 315 GKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVF----ELVRERGVSDLYAFG 370
KCG++ A +F+RL K+ +SW ++ Y Y+ E++R +
Sbjct: 312 SKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTML 371
Query: 371 TVLRACSGVAAVMLGKEVHCQYVR--KGGWRDVIVESALVDLYAKCGCVDFAQRLFLSME 428
++L AC+ + A+ +G+ +H + KG + ++L+D+YAKCG ++ A ++F S+
Sbjct: 372 SILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL 431
Query: 429 VRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRR 488
++ +WNAMI G A +GR +LF M K G++PD ITF+G+L ACSH+G++D GR
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRH 491
Query: 489 YFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKC 548
F M +Y + P +EHY CMIDLLG + + +EAE ++ + D +W LL AC
Sbjct: 492 IFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMH 551
Query: 549 SDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSW 608
+ E A +I++EP+ SYVLL NIY + GRWN+ + R L+ D+G+KK+PG S
Sbjct: 552 GNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSS 611
Query: 609 I 609
I
Sbjct: 612 I 612
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 316 bits (809), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 189/568 (33%), Positives = 302/568 (53%), Gaps = 28/568 (4%)
Query: 58 LDPNLKPVLYASLLQTCTKTSSF--LHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGP- 114
+ + KP+L S L+ C LHG + + +++ I R + + P
Sbjct: 2 MKKHYKPIL--SQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLID------FCTTCPE 53
Query: 115 --HLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSV 172
+L A+++F+S+ + W S+I Y+ + P +L + +ML P+ FT V
Sbjct: 54 TMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYV 113
Query: 173 ITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPED 232
+ A S LRD+ G+C+H V+ GF N +S+ L+ MY V L++F++ P+ +
Sbjct: 114 LKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQ-WN 172
Query: 233 VVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELH 292
VV W ++IS N+ F +A+ F M G+ + LL AC + GK H
Sbjct: 173 VVAWGSLISGFVNNNRFSDAIEAFREMQSN-GVKANETIMVDLLVACGRCKDIVTGKWFH 231
Query: 293 AKVVGLG--------ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSA 344
+ GLG + NV++ +SL+DMY KCG + AR +FD + ++ VSW ++++
Sbjct: 232 GFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITG 291
Query: 345 YCQNKEYE---AVFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRD 400
Y QN + E +F + + G++ D F +V+RA LG+ +H + G +D
Sbjct: 292 YSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKD 351
Query: 401 VIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIK 460
+ ALV++YAK G + A++ F +E ++ I W +I GLA +G G E L +F+ M +
Sbjct: 352 AAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQE 411
Query: 461 EG-MEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMI 519
+G PD IT++GVL+ACSH GLV+EG+RYFA M D +G++P VEHY CM+D+L RA
Sbjct: 412 KGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRF 471
Query: 520 EEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIY 579
EEAE L++ + + ++W LL C + +R+ + E E YVLL NIY
Sbjct: 472 EEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIY 531
Query: 580 RAVGRWNDAMEIRKLMEDRGVKKLPGKS 607
GRW D IR+ M+ + V K+ G S
Sbjct: 532 AKAGRWADVKLIRESMKSKRVDKVLGHS 559
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 192/438 (43%), Gaps = 53/438 (12%)
Query: 188 LHAMVISRGFHSNTVISSALVDMY---GRNRAVRDALKLFDESPEPEDVVGWTAIISTLT 244
LH ++I N + S L+D + A +F ES + V W ++I +
Sbjct: 25 LHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVF-ESIDCPSVYIWNSMIRGYS 83
Query: 245 RNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNV 304
+ +AL + M R G PD FTF +L AC+ L ++ G +H VV G N+
Sbjct: 84 NSPNPDKALIFYQEMLRK-GYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNM 142
Query: 305 VVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVS 364
V + LL MY CG+V VF+ + N V+W +++S + N + E RE +
Sbjct: 143 YVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSN 202
Query: 365 DLYAFGTV----LRACSGVAAVMLGKEVHC--------QYVRKGGWRDVIVESALVDLYA 412
+ A T+ L AC ++ GK H Y + +VI+ ++L+D+YA
Sbjct: 203 GVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYA 262
Query: 413 KCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIG 472
KCG + A+ LF M R ++WN++I G +QNG E L +F DM+ G+ PD +TF+
Sbjct: 263 KCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLS 322
Query: 473 VLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCR 532
V+ A G G+ A V + G ++++ + E A+ E+ + +
Sbjct: 323 VIRASMIQGCSQLGQSIHAY-VSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE-K 380
Query: 533 YDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIR 592
D W V V++G + G N+A+ I
Sbjct: 381 KDTIAWTV--------------------------------VIIG--LASHGHGNEALSIF 406
Query: 593 KLMEDRGVKKLPGKSWIG 610
+ M+++G G +++G
Sbjct: 407 QRMQEKGNATPDGITYLG 424
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 191/561 (34%), Positives = 309/561 (55%), Gaps = 23/561 (4%)
Query: 60 PNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDR-FVGNSLLTLYLKLGPHLPQ 118
PN ++ S L C S G +HA LKS HS +V N+L+ +Y + G +PQ
Sbjct: 282 PNSYTIV--SALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGK-MPQ 338
Query: 119 AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASK 178
A+ + + D++ W SLI Y + +L+ FS M+ + + +++S+I A+ +
Sbjct: 339 AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398
Query: 179 LRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAV----RDALKLFDESPEPEDVV 234
L +L G LHA VI G+ SN + + L+DMY + R L++ D+ D++
Sbjct: 399 LSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDK-----DLI 453
Query: 235 GWTAIISTLTRNDMFREALRLF--VAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELH 292
WT +I+ +ND EAL LF VA R + D G++L A + L + KE+H
Sbjct: 454 SWTTVIAGYAQNDCHVEALELFRDVAKKR---MEIDEMILGSILRASSVLKSMLIVKEIH 510
Query: 293 AKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYE 352
++ G+ + V+++ L+D+YGKC +G A VF+ + K+ VSWT+M+S+ N
Sbjct: 511 CHILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNES 569
Query: 353 AVFELVR---ERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALV 408
EL R E G+S D A +L A + ++A+ G+E+HC +RKG + + A+V
Sbjct: 570 EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVV 629
Query: 409 DLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYI 468
D+YA CG + A+ +F +E + + + +MI +G G +ELF+ M E + PD+I
Sbjct: 630 DMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHI 689
Query: 469 TFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLEN 528
+F+ +L+ACSH GL+DEGR + +M EY ++P EHY C++D+LGRA + EA ++
Sbjct: 690 SFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKM 749
Query: 529 ADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDA 588
+W LL AC S+ E A++++ELEP + VL+ N++ GRWND
Sbjct: 750 MKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDV 809
Query: 589 MEIRKLMEDRGVKKLPGKSWI 609
++R M+ G++K PG SWI
Sbjct: 810 EKVRAKMKASGMEKHPGCSWI 830
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 141/448 (31%), Positives = 233/448 (52%), Gaps = 16/448 (3%)
Query: 39 CKDGSLRQALHLLNTSQTTLDPNLKPV-LYASLLQTCTKTSSFLHGTTLHAHALKSGIHS 97
C DG L +A L+ S+ N PV +A +L+ C K + G LH+ K+
Sbjct: 59 CFDGVLTEAFQRLDVSE-----NNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSF 113
Query: 98 D-RFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQ 156
+ F+ L+ +Y K G L A+ +FD + R AW ++I AY G P ++L L+
Sbjct: 114 ELDFLAGKLVFMYGKCGS-LDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWN 172
Query: 157 MLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRA 216
M + + +++ A +KLRD+ G+ LH++++ G+HS I +ALV MY +N
Sbjct: 173 MRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDD 232
Query: 217 VRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLL 276
+ A +LFD E D V W +I+S+ + + E L LF MH G P+ +T + L
Sbjct: 233 LSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHM-TGPAPNSYTIVSAL 291
Query: 277 AACANLGWLRQGKELHAKVVGLGI-CGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNS 335
AC + + GKE+HA V+ + V ++L+ MY +CGK+ QA + ++ + +
Sbjct: 292 TACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADV 351
Query: 336 VSWTAMLSAYCQNKEYEAVFE----LVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQ 391
V+W +++ Y QN Y+ E ++ SD + +++ A ++ ++ G E+H
Sbjct: 352 VTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHA- 410
Query: 392 YVRKGGW-RDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTE 450
YV K GW ++ V + L+D+Y+KC + R FL M ++ I+W +I G AQN E
Sbjct: 411 YVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVE 470
Query: 451 VLELFEDMIKEGMEPDYITFIGVLFACS 478
LELF D+ K+ ME D + +L A S
Sbjct: 471 ALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 128/268 (47%), Gaps = 9/268 (3%)
Query: 272 FGTLLAACANLGWLRQGKELHAKVVGLGICGNV-VVESSLLDMYGKCGKVGQARVVFDRL 330
F +L C + QG++LH+++ + + L+ MYGKCG + A VFD +
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 331 GDKNSVSWTAMLSAYCQNKEYEAVFEL---VRERGVS-DLYAFGTVLRACSGVAAVMLGK 386
D+ + +W M+ AY N E + L +R GV L +F +L+AC+ + + G
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202
Query: 387 EVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR-NQITWNAMIGGLAQN 445
E+H V+ G + +ALV +YAK + A+RLF + + + + WN+++ + +
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTS 262
Query: 446 GRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEH 505
G+ E LELF +M G P+ T + L AC G+ A ++ +
Sbjct: 263 GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYV 322
Query: 506 YNCMIDLLGRAEMIEEAESLL---ENAD 530
N +I + R + +AE +L NAD
Sbjct: 323 CNALIAMYTRCGKMPQAERILRQMNNAD 350
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 364 SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDV-IVESALVDLYAKCGCVDFAQR 422
S + AF VL C AV G+++H + + ++ + LV +Y KCG +D A++
Sbjct: 78 SPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEK 137
Query: 423 LFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGL 482
+F M R WN MIG NG L L+ +M EG+ +F +L AC+
Sbjct: 138 VFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRD 197
Query: 483 VDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLL 542
+ G +L+V + G N ++ + + + + A L + + D LW +L
Sbjct: 198 IRSGSELHSLLV-KLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 256
Query: 543 GACTKCSDYVTAERVARKMIELEPDFHLS 571
S Y T+ + + + +EL + H++
Sbjct: 257 ------SSYSTSGK-SLETLELFREMHMT 278
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 312 bits (800), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 186/553 (33%), Positives = 308/553 (55%), Gaps = 10/553 (1%)
Query: 62 LKPVLYA--SLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQA 119
+KP +Y +L+TC G +H H ++ G D V N+L+T+Y+K G + A
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGD-VKSA 250
Query: 120 QTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKL 179
+ LFD + RDII+W ++IS Y G L+LF M L ++P+ T++SVI+A L
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 180 RDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAI 239
D LG +HA VI+ GF + + ++L MY + R+A KLF E +D+V WT +
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM-ERKDIVSWTTM 369
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG 299
IS N + +A+ + M + + PD T +L+ACA LG L G ELH +
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQD-SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR 428
Query: 300 ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAY-CQNKEYEAVFELV 358
+ V+V ++L++MY KC + +A +F + KN +SWT++++ N+ +EA+ L
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLR 488
Query: 359 RERGV--SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGC 416
+ + + L AC+ + A+M GKE+H +R G D + +AL+D+Y +CG
Sbjct: 489 QMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGR 548
Query: 417 VDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFA 476
++ A F S + ++ +WN ++ G ++ G+G+ V+ELF+ M+K + PD ITFI +L
Sbjct: 549 MNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCG 607
Query: 477 CSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHS 536
CS + +V +G YF+ M D YG+ P ++HY C++DLLGRA ++EA ++ D +
Sbjct: 608 CSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPA 666
Query: 537 LWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLME 596
+W LL AC E A+ + EL+ Y+LL N+Y G+W + ++R++M+
Sbjct: 667 VWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMK 726
Query: 597 DRGVKKLPGKSWI 609
+ G+ G SW+
Sbjct: 727 ENGLTVDAGCSWV 739
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 191/388 (49%), Gaps = 6/388 (1%)
Query: 145 GRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVIS 204
G+ +++L + M +L + + +++ R G+ ++++ +S +
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELG 132
Query: 205 SALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCG 264
+A + M+ R + DA +F + E ++ W ++ + F EA+ L+ M G
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSE-RNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 265 LVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQAR 324
+ PD +TF +L C + L +GKE+H VV G ++ V ++L+ MY KCG V AR
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 325 VVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRE-RGVS---DLYAFGTVLRACSGVA 380
++FDR+ ++ +SW AM+S Y +N EL RG+S DL +V+ AC +
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 381 AVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIG 440
LG+++H + G D+ V ++L +Y G A++LF ME ++ ++W MI
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 441 GLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIK 500
G N + ++ + M ++ ++PD IT VL AC+ G +D G L + I
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431
Query: 501 PGVEHYNCMIDLLGRAEMIEEAESLLEN 528
+ N +I++ + + I++A + N
Sbjct: 432 YVIVANN-LINMYSKCKCIDKALDIFHN 458
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 142/309 (45%), Gaps = 16/309 (5%)
Query: 243 LTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICG 302
L N EA++L +M + D F L+ C W ++ +E +KV + +
Sbjct: 69 LCANGKLEEAMKLLNSMQE-LRVAVDEDVFVALVRLCE---W-KRAQEEGSKVYSIALSS 123
Query: 303 ----NVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELV 358
V + ++ L M+ + G + A VF ++ ++N SW ++ Y + ++ L
Sbjct: 124 MSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLY 183
Query: 359 RER----GVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAK 413
GV D+Y F VLR C G+ + GKEVH VR G D+ V +AL+ +Y K
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK 243
Query: 414 CGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGV 473
CG V A+ LF M R+ I+WNAMI G +NG E LELF M ++PD +T V
Sbjct: 244 CGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSV 303
Query: 474 LFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRY 533
+ AC G GR A ++ G + N + + A EAE L + R
Sbjct: 304 ISACELLGDRRLGRDIHAYVITT-GFAVDISVCNSLTQMYLNAGSWREAEKLFSRME-RK 361
Query: 534 DHSLWAVLL 542
D W ++
Sbjct: 362 DIVSWTTMI 370
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 312 bits (800), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 183/585 (31%), Positives = 303/585 (51%), Gaps = 41/585 (7%)
Query: 68 ASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLA 127
ASLL C +FL G +HAH + SG+ + L+T Y H +AQ++ ++
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLH-NEAQSIIENSD 105
Query: 128 VRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGAC 187
+ + W LI++Y + + + +M+ + P+AFT SV+ A + D+A G
Sbjct: 106 ILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRV 165
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRND 247
+H + + S+ + +AL+ MY R R + A +LFD E D V W A+I+
Sbjct: 166 VHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFE-RDAVSWNAVINCYASEG 224
Query: 248 MFREALRLFVAM---------------HRGC----------GLVPDGFTFGTLL------ 276
M+ EA LF M GC GL+ F T L
Sbjct: 225 MWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMI 284
Query: 277 ---AACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK 333
AC+ +G +R GKE+H + G V ++L+ MY KC + A +VF + +
Sbjct: 285 IGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEEN 344
Query: 334 NSVSWTAMLSAYCQNKEYEAVFELVRERGVSDL----YAFGTVLRACSGVAAVMLGKEVH 389
+ +W +++S Y Q + E L+RE V+ ++L C+ +A + GKE H
Sbjct: 345 SLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFH 404
Query: 390 CQYVRKGGWRD-VIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRG 448
C +R+ ++D ++ ++LVD+YAK G + A+++ M R+++T+ ++I G G G
Sbjct: 405 CYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEG 464
Query: 449 TEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNC 508
L LF++M + G++PD++T + VL ACSH+ LV EG R F M EYGI+P ++H++C
Sbjct: 465 GVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSC 524
Query: 509 MIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDF 568
M+DL GRA + +A+ ++ N + + WA LL AC + + A K++E++P+
Sbjct: 525 MVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPEN 584
Query: 569 HLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSEN 613
YVL+ N+Y A G W+ E+R +M D GVKK PG +WI +++
Sbjct: 585 PGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDS 629
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 139/287 (48%), Gaps = 6/287 (2%)
Query: 61 NLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQ 120
+L PV L+ C+ + G +H A+ S V N+L+T+Y K L A
Sbjct: 277 SLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKC-KDLRHAL 335
Query: 121 TLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLR 180
+F + W S+IS Y + + + L +ML +PN+ T++S++ +++
Sbjct: 336 IVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIA 395
Query: 181 DLALGACLHAMVISRG-FHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAI 239
+L G H ++ R F T++ ++LVD+Y ++ + A ++ D + D V +T++
Sbjct: 396 NLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSK-RDEVTYTSL 454
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV-VGL 298
I AL LF M R G+ PD T +L+AC++ + +G+ L K+
Sbjct: 455 IDGYGNQGEGGVALALFKEMTRS-GIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEY 513
Query: 299 GICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNS-VSWTAMLSA 344
GI + S ++D+YG+ G + +A+ + + K S +W +L+A
Sbjct: 514 GIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNA 560
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 355 FELVR---ERGVSD---LYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALV 408
F L+R VSD L++ ++L AC V A + G +VH + G ++ LV
Sbjct: 26 FSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLV 85
Query: 409 DLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYI 468
Y+ + AQ + + ++ + + WN +I A+N EV+ ++ M+ +G+ PD
Sbjct: 86 TFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAF 145
Query: 469 TFIGVLFACSHTGLVDEGR 487
T+ VL AC T V GR
Sbjct: 146 TYPSVLKACGETLDVAFGR 164
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 177/553 (32%), Positives = 298/553 (53%), Gaps = 9/553 (1%)
Query: 62 LKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQT 121
L P ++ S L+ LH+ +K G S+ FVG +L+ Y G + A+T
Sbjct: 144 LNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGS-VDSART 202
Query: 122 LFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRD 181
+F+ + +DI+ W ++S Y G +SL+L S M PN +T + + A+ L
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGA 262
Query: 182 LALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIS 241
+H ++ + + + L+ +Y + + DA K+F+E P+ DVV W+ +I+
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPK-NDVVPWSFMIA 321
Query: 242 TLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGIC 301
+N EA+ LF+ M R +VP+ FT ++L CA G++LH VV +G
Sbjct: 322 RFCQNGFCNEAVDLFIRM-REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFD 380
Query: 302 GNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRER 361
++ V ++L+D+Y KC K+ A +F L KN VSW ++ Y E F + RE
Sbjct: 381 LDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREA 440
Query: 362 -----GVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGC 416
V+++ F + L AC+ +A++ LG +VH ++ + V V ++L+D+YAKCG
Sbjct: 441 LRNQVSVTEV-TFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGD 499
Query: 417 VDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFA 476
+ FAQ +F ME + +WNA+I G + +G G + L + + M +P+ +TF+GVL
Sbjct: 500 IKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSG 559
Query: 477 CSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHS 536
CS+ GL+D+G+ F M+ ++GI+P +EHY CM+ LLGR+ +++A L+E
Sbjct: 560 CSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVM 619
Query: 537 LWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLME 596
+W +L A ++ A R A +++++ P +YVL+ N+Y +W + IRK M+
Sbjct: 620 IWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMK 679
Query: 597 DRGVKKLPGKSWI 609
+ GVKK PG SWI
Sbjct: 680 EMGVKKEPGLSWI 692
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 232/493 (47%), Gaps = 13/493 (2%)
Query: 54 SQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLG 113
S ++ P L Y ++L+ C + + + +H LK G D F N LL Y+K G
Sbjct: 39 SSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAG 98
Query: 114 PHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVI 173
A LFD + R+ +++ +L Y PI L+S++ E N +S +
Sbjct: 99 FD-KDALNLFDEMPERNNVSFVTLAQGYA-CQDPIG---LYSRLHREGHELNPHVFTSFL 153
Query: 174 TAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDV 233
L + LH+ ++ G+ SN + +AL++ Y +V A +F E +D+
Sbjct: 154 KLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVF-EGILCKDI 212
Query: 234 VGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHA 293
V W I+S N F ++L+L M R G +P+ +TF T L A LG K +H
Sbjct: 213 VVWAGIVSCYVENGYFEDSLKLLSCM-RMAGFMPNNYTFDTALKASIGLGAFDFAKGVHG 271
Query: 294 KVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKE-YE 352
+++ + V LL +Y + G + A VF+ + + V W+ M++ +CQN E
Sbjct: 272 QILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNE 331
Query: 353 AVFELVRERG---VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVD 409
AV +R R V + + ++L C+ LG+++H V+ G D+ V +AL+D
Sbjct: 332 AVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALID 391
Query: 410 LYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYIT 469
+YAKC +D A +LF + +N+++WN +I G G G + +F + ++ + +T
Sbjct: 392 VYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVT 451
Query: 470 FIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENA 529
F L AC+ +D G + L + K V N +ID+ + I+ A+S+
Sbjct: 452 FSSALGACASLASMDLGVQVHGLAIKTNNAKK-VAVSNSLIDMYAKCGDIKFAQSVFNEM 510
Query: 530 DCRYDHSLWAVLL 542
+ D + W L+
Sbjct: 511 E-TIDVASWNALI 522
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 186/558 (33%), Positives = 299/558 (53%), Gaps = 13/558 (2%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDR-FVGNSLLTLYLKLGPHLPQAQTLFDS 125
Y L + C + S HG LH ++ GI + + N +L +Y + L A LFD
Sbjct: 86 YQCLFEACRELRSLSHGRLLHDR-MRMGIENPSVLLQNCVLQMYCECRS-LEDADKLFDE 143
Query: 126 LAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALG 185
++ + ++ T++ISAY G ++ LFS ML +P + ++++ + R L G
Sbjct: 144 MSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFG 203
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTR 245
+HA VI G SNT I + +V+MY + + A ++FD+ + V T ++ T+
Sbjct: 204 RQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPV-ACTGLMVGYTQ 262
Query: 246 NDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV 305
R+AL+LFV + G+ D F F +L ACA+L L GK++HA V LG+ V
Sbjct: 263 AGRARDALKLFVDLVTE-GVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVS 321
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYE---AVFELVRERG 362
V + L+D Y KC A F + + N VSW+A++S YCQ ++E F+ +R +
Sbjct: 322 VGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKN 381
Query: 363 VSDL--YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFA 420
S L + + ++ +ACS +A +G +VH +++ ESAL+ +Y+KCGC+D A
Sbjct: 382 ASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDA 441
Query: 421 QRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHT 480
+F SM+ + + W A I G A G +E L LFE M+ GM+P+ +TFI VL ACSH
Sbjct: 442 NEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHA 501
Query: 481 GLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAV 540
GLV++G+ M+ +Y + P ++HY+CMID+ R+ +++EA ++N D W
Sbjct: 502 GLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKC 561
Query: 541 LLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGV 600
L C + E ++ +L+P+ YVL N+Y G+W +A E+ KLM +R +
Sbjct: 562 FLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERML 621
Query: 601 KKLPGKSWIGSENQKGSL 618
KK SWI +KG +
Sbjct: 622 KKELSCSWI---QEKGKI 636
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 213/422 (50%), Gaps = 13/422 (3%)
Query: 28 ASSTDSEILQHCKDGSLRQALHLLNTSQTTLDPNLKP--VLYASLLQTCTKTSSFLHGTT 85
A S + I + + G L +A+ L + + D KP +Y +LL++ + G
Sbjct: 149 AVSRTTMISAYAEQGILDKAVGLFSGMLASGD---KPPSSMYTTLLKSLVNPRALDFGRQ 205
Query: 86 LHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAG 145
+HAH +++G+ S+ + ++ +Y+K G L A+ +FD +AV+ +A T L+ YT+AG
Sbjct: 206 IHAHVIRAGLCSNTSIETGIVNMYVKCG-WLVGAKRVFDQMAVKKPVACTGLMVGYTQAG 264
Query: 146 RPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISS 205
R ++L+LF ++ +E ++F S V+ A + L +L LG +HA V G S + +
Sbjct: 265 RARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGT 324
Query: 206 ALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGL 265
LVD Y + + A + F E EP D V W+AIIS + F EA++ F ++
Sbjct: 325 PLVDFYIKCSSFESACRAFQEIREPND-VSWSAIISGYCQMSQFEEAVKTFKSLRSKNAS 383
Query: 266 VPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARV 325
+ + FT+ ++ AC+ L G ++HA + + G+ ES+L+ MY KCG + A
Sbjct: 384 ILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANE 443
Query: 326 VFDRLGDKNSVSWTAMLSA---YCQNKEYEAVFELVRERGVS-DLYAFGTVLRACSGVAA 381
VF+ + + + V+WTA +S Y E +FE + G+ + F VL ACS
Sbjct: 444 VFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGL 503
Query: 382 VMLGKEVHCQYVRKGGWRDVIVE-SALVDLYAKCGCVDFAQRLFLSMEVR-NQITWNAMI 439
V GK +RK I ++D+YA+ G +D A + +M + ++W +
Sbjct: 504 VEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFL 563
Query: 440 GG 441
G
Sbjct: 564 SG 565
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 200/429 (46%), Gaps = 22/429 (5%)
Query: 146 RPIN-SLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVIS 204
R +N + + +M + ++++ + A +LR L+ G LH + + + ++
Sbjct: 62 RKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQ 121
Query: 205 SALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCG 264
+ ++ MY R++ DA KLFDE E + V T +IS + +A+ LF M G
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSEL-NAVSRTTMISAYAEQGILDKAVGLFSGM-LASG 179
Query: 265 LVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQAR 324
P + TLL + N L G+++HA V+ G+C N +E+ +++MY KCG + A+
Sbjct: 180 DKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAK 239
Query: 325 VVFDRLGDKNSVSWTAMLSAYCQ----NKEYEAVFELVRERGVSDLYAFGTVLRACSGVA 380
VFD++ K V+ T ++ Y Q + +LV E D + F VL+AC+ +
Sbjct: 240 RVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLE 299
Query: 381 AVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIG 440
+ LGK++H + G +V V + LVD Y KC + A R F + N ++W+A+I
Sbjct: 300 ELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIIS 359
Query: 441 GLAQNGRGTEVLELFEDM-IKEGMEPDYITFIGVLFACSHTGLVDEGRRYFA------LM 493
G Q + E ++ F+ + K + T+ + ACS + G + A L+
Sbjct: 360 GYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLI 419
Query: 494 VDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVT 553
+YG + +I + + +++A + E+ D D W + +
Sbjct: 420 GSQYG-------ESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGNASE 471
Query: 554 AERVARKMI 562
A R+ KM+
Sbjct: 472 ALRLFEKMV 480
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 308 bits (789), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 174/476 (36%), Positives = 268/476 (56%), Gaps = 17/476 (3%)
Query: 143 RAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTV 202
RA + ++SLQ D + T S +I R + G + + G
Sbjct: 44 RAMKAMDSLQSHGLWAD------SATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMF 97
Query: 203 ISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRG 262
+ + L++MY + + DA +LFD+ P+ +V+ WT +IS ++ + ++AL L V M R
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQ-RNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 263 CGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQ 322
+ P+ +T+ ++L +C + +R LH ++ G+ +V V S+L+D++ K G+
Sbjct: 157 -NVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 323 ARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERG----VSDLYAFGTVLRACSG 378
A VFD + +++ W +++ + QN + EL + +++ +VLRAC+G
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272
Query: 379 VAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAM 438
+A + LG + H V+ +D+I+ +ALVD+Y KCG ++ A R+F M+ R+ ITW+ M
Sbjct: 273 LALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330
Query: 439 IGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYG 498
I GLAQNG E L+LFE M G +P+YIT +GVLFACSH GL+++G YF M YG
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390
Query: 499 IKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVA 558
I P EHY CMIDLLG+A +++A LL +C D W LLGAC + V AE A
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAA 450
Query: 559 RKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
+K+I L+P+ +Y LL NIY +W+ EIR M DRG+KK PG SWI Q
Sbjct: 451 KKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQ 506
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 213/425 (50%), Gaps = 22/425 (5%)
Query: 29 SSTD-----SEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHG 83
SSTD SE + C L +A+ +++ Q+ Y+ L++ C + G
Sbjct: 22 SSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSH-GLWADSATYSELIKCCISNRAVHEG 80
Query: 84 TTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTR 143
+ H +G F+ N L+ +Y+K L A LFD + R++I+WT++ISAY++
Sbjct: 81 NLICRHLYFNGHRPMMFLVNVLINMYVKFNL-LNDAHQLFDQMPQRNVISWTTMISAYSK 139
Query: 144 AGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVI 203
+L+L ML ++ PN +T SSV+ + + + D+ + LH +I G S+ +
Sbjct: 140 CKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFV 196
Query: 204 SSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGC 263
SAL+D++ + DAL +FDE + +V W +II +N AL LF M R
Sbjct: 197 RSALIDVFAKLGEPEDALSVFDEMVTGDAIV-WNSIIGGFAQNSRSDVALELFKRMKRA- 254
Query: 264 GLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQA 323
G + + T ++L AC L L G + H +V ++++ ++L+DMY KCG + A
Sbjct: 255 GFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDA 312
Query: 324 RVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRERGVSDLY-AFGTVLRACSGV 379
VF+++ +++ ++W+ M+S QN +E +FE ++ G Y VL ACS
Sbjct: 313 LRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSH- 371
Query: 380 AAVMLGKEVHCQYVRKGGWRDVIVE--SALVDLYAKCGCVDFAQRLFLSMEVR-NQITWN 436
A ++ + + ++K D + E ++DL K G +D A +L ME + +TW
Sbjct: 372 AGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWR 431
Query: 437 AMIGG 441
++G
Sbjct: 432 TLLGA 436
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 199/656 (30%), Positives = 319/656 (48%), Gaps = 114/656 (17%)
Query: 64 PVLYASLLQTCT--------KTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPH 115
P+ ++LL+ CT K++ +H +KSG+ ++ N+L+ +Y K G
Sbjct: 6 PLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYA 65
Query: 116 LPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLD-------------- 161
L A+ LFD + +R +W +++SAY++ G ++ + F Q+ D
Sbjct: 66 L-HARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNI 124
Query: 162 -----------------MEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVIS 204
+EP FT+++V+ + + R + G +H+ ++ G N +S
Sbjct: 125 GQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVS 184
Query: 205 SALVDMYGR------------NRAVRD-------------------ALKLFDESPEPEDV 233
++L++MY + VRD A+ F++ E D+
Sbjct: 185 NSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE-RDI 243
Query: 234 VGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHA 293
V W ++IS + AL +F M R L PD FT ++L+ACANL L GK++H+
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 294 KVVGLGICGNVVVESSLLDMYGKCGKV--------------------------------- 320
+V G + +V ++L+ MY +CG V
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363
Query: 321 GQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVR------ERGVSDLYAFGTVLR 374
QA+ +F L D++ V+WTAM+ Y Q+ Y L R +R S Y +L
Sbjct: 364 NQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNS--YTLAAMLS 421
Query: 375 ACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEV-RNQI 433
S +A++ GK++H V+ G V V +AL+ +YAK G + A R F + R+ +
Sbjct: 422 VASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTV 481
Query: 434 TWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALM 493
+W +MI LAQ+G E LELFE M+ EG+ PD+IT++GV AC+H GLV++GR+YF +M
Sbjct: 482 SWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMM 541
Query: 494 VDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVT 553
D I P + HY CM+DL GRA +++EA+ +E D W LL AC +
Sbjct: 542 KDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDL 601
Query: 554 AERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
+ A +++ LEP+ +Y L N+Y A G+W +A +IRK M+D VKK G SWI
Sbjct: 602 GKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 135/337 (40%), Gaps = 76/337 (22%)
Query: 267 PDGFTFGTLLAACANLGWLRQGKE--------LHAKVVGLGICGNVVVESSLLDMYGKCG 318
P + TLL C NL K +H +V+ G+ +V + ++L+++Y K G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 319 KVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFE---------------------- 356
AR +FD + + + SW +LSAY + + ++ E
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 357 -------------LVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIV 403
+V+E + VL + + + GK+VH V+ G +V V
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 404 ESALVDLYAKC-------------------------------GCVDFAQRLFLSMEVRNQ 432
++L+++YAKC G +D A F M R+
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 433 ITWNAMIGGLAQNGRGTEVLELFEDMIKEG-MEPDYITFIGVLFACSHTGLVDEGRRYFA 491
+TWN+MI G Q G L++F M+++ + PD T VL AC++ + G++ +
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 492 LMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLEN 528
+V G+ N +I + R +E A L+E
Sbjct: 304 HIVTTGFDISGIV-LNALISMYSRCGGVETARRLIEQ 339
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 311/577 (53%), Gaps = 42/577 (7%)
Query: 71 LQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRD 130
L C K+ + +G +H +K G D FV NSL+ Y + G L A+ +FD ++ R+
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG-ELDSARKVFDEMSERN 199
Query: 131 IIAWTSLISAYTRAGRPINSLQLFSQML-DLDMEPNAFTISSVITAASKLRDLALGACLH 189
+++WTS+I Y R +++ LF +M+ D ++ PN+ T+ VI+A +KL DL G ++
Sbjct: 200 VVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY 259
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMF 249
A + + G N ++ SALVDMY + A+ A +LFDE ++ A+ S R +
Sbjct: 260 AFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG-ASNLDLCNAMASNYVRQGLT 318
Query: 250 REALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESS 309
REAL +F M G+ PD + + +++C+ L + GK H V+ G + ++
Sbjct: 319 REALGVFNLMMDS-GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 377
Query: 310 LLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEA---VFELVRERGV--- 363
L+DMY KC + A +FDR+ +K V+W ++++ Y +N E +A FE + E+ +
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 437
Query: 364 ------------------------------SDLYAFGTVLRACSGVAAVMLGKEVHCQYV 393
+D ++ AC + A+ L K ++ Y+
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY-YYI 496
Query: 394 RKGGWR-DVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVL 452
K G + DV + + LVD++++CG + A +F S+ R+ W A IG +A G +
Sbjct: 497 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAI 556
Query: 453 ELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDL 512
ELF+DMI++G++PD + F+G L ACSH GLV +G+ F M+ +G+ P HY CM+DL
Sbjct: 557 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 616
Query: 513 LGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSY 572
LGRA ++EEA L+E+ + +W LL AC + A A K+ L P+ SY
Sbjct: 617 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 676
Query: 573 VLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
VLL N+Y + GRWND ++R M+++G++K PG S I
Sbjct: 677 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 157/577 (27%), Positives = 260/577 (45%), Gaps = 63/577 (10%)
Query: 44 LRQALHL----LNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTL------HAHALKS 93
L LHL L T+ TT KP L T SS + T+ H K
Sbjct: 4 LGNVLHLSPMVLATTTTT-----KPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQ 58
Query: 94 GIHSDRFVGNSLLTLYLKLGPH--LPQAQTLFD-SLAVRDIIAWTSLISAYTRAGRPINS 150
G+ +D L+ +LG L A+ +F+ S + + SLI Y +G +
Sbjct: 59 GLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEA 118
Query: 151 LQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDM 210
+ LF +M++ + P+ +T ++A +K R G +H +++ G+ + + ++LV
Sbjct: 119 ILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHF 178
Query: 211 YGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGF 270
Y + A K+FDE E +VV WT++I R D ++A+ LF M R + P+
Sbjct: 179 YAECGELDSARKVFDEMSE-RNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV 237
Query: 271 TFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRL 330
T +++ACA L L G++++A + GI N ++ S+L+DMY KC + A+ +FD
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 331 GDKNSVSWTAMLSAYCQN---KEYEAVFELVRERGV-SDLYAFGTVLRACSGVAAVMLGK 386
G N AM S Y + +E VF L+ + GV D + + + +CS + ++ GK
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357
Query: 387 EVHCQYVRKG--GWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQ 444
H +R G W ++ +AL+D+Y KC D A R+F M + +TWN+++ G +
Sbjct: 358 SCHGYVLRNGFESWDNIC--NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVE 415
Query: 445 NGRGTEVLELFEDMI--------------------------------KEGMEPDYITFIG 472
NG E FE M +EG+ D +T +
Sbjct: 416 NGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMS 475
Query: 473 VLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCR 532
+ AC H G +D ++ +++ GI+ V ++D+ R E A S+ + R
Sbjct: 476 IASACGHLGALDLA-KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR 534
Query: 533 YDHSLWAVLLGACTKCSDYVTAERVARKMIE--LEPD 567
D S W +GA + A + MIE L+PD
Sbjct: 535 -DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 102/204 (50%), Gaps = 7/204 (3%)
Query: 42 GSL-RQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRF 100
GSL +A+ + + Q+ N V S+ C + ++ + K+GI D
Sbjct: 447 GSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVR 506
Query: 101 VGNSLLTLYLKLGPHLPQ-AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLD 159
+G +L+ ++ + G P+ A ++F+SL RD+ AWT+ I A AG +++LF M++
Sbjct: 507 LGTTLVDMFSRCGD--PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Query: 160 LDMEPNAFTISSVITAASKLRDLALGA-CLHAMVISRGFHSNTVISSALVDMYGRNRAVR 218
++P+ +TA S + G ++M+ G V +VD+ GR +
Sbjct: 565 QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLE 624
Query: 219 DALKLFDESP-EPEDVVGWTAIIS 241
+A++L ++ P EP DV+ W ++++
Sbjct: 625 EAVQLIEDMPMEPNDVI-WNSLLA 647
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 305 bits (782), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 311/577 (53%), Gaps = 42/577 (7%)
Query: 71 LQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRD 130
L C K+ + +G +H +K G D FV NSL+ Y + G L A+ +FD ++ R+
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG-ELDSARKVFDEMSERN 199
Query: 131 IIAWTSLISAYTRAGRPINSLQLFSQML-DLDMEPNAFTISSVITAASKLRDLALGACLH 189
+++WTS+I Y R +++ LF +M+ D ++ PN+ T+ VI+A +KL DL G ++
Sbjct: 200 VVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY 259
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMF 249
A + + G N ++ SALVDMY + A+ A +LFDE ++ A+ S R +
Sbjct: 260 AFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG-ASNLDLCNAMASNYVRQGLT 318
Query: 250 REALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESS 309
REAL +F M G+ PD + + +++C+ L + GK H V+ G + ++
Sbjct: 319 REALGVFNLMMDS-GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 377
Query: 310 LLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEA---VFELVRERGV--- 363
L+DMY KC + A +FDR+ +K V+W ++++ Y +N E +A FE + E+ +
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 437
Query: 364 ------------------------------SDLYAFGTVLRACSGVAAVMLGKEVHCQYV 393
+D ++ AC + A+ L K ++ Y+
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY-YYI 496
Query: 394 RKGGWR-DVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVL 452
K G + DV + + LVD++++CG + A +F S+ R+ W A IG +A G +
Sbjct: 497 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAI 556
Query: 453 ELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDL 512
ELF+DMI++G++PD + F+G L ACSH GLV +G+ F M+ +G+ P HY CM+DL
Sbjct: 557 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 616
Query: 513 LGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSY 572
LGRA ++EEA L+E+ + +W LL AC + A A K+ L P+ SY
Sbjct: 617 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 676
Query: 573 VLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
VLL N+Y + GRWND ++R M+++G++K PG S I
Sbjct: 677 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 157/577 (27%), Positives = 260/577 (45%), Gaps = 63/577 (10%)
Query: 44 LRQALHL----LNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTL------HAHALKS 93
L LHL L T+ TT KP L T SS + T+ H K
Sbjct: 4 LGNVLHLSPMVLATTTTT-----KPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQ 58
Query: 94 GIHSDRFVGNSLLTLYLKLGPH--LPQAQTLFD-SLAVRDIIAWTSLISAYTRAGRPINS 150
G+ +D L+ +LG L A+ +F+ S + + SLI Y +G +
Sbjct: 59 GLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEA 118
Query: 151 LQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDM 210
+ LF +M++ + P+ +T ++A +K R G +H +++ G+ + + ++LV
Sbjct: 119 ILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHF 178
Query: 211 YGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGF 270
Y + A K+FDE E +VV WT++I R D ++A+ LF M R + P+
Sbjct: 179 YAECGELDSARKVFDEMSE-RNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV 237
Query: 271 TFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRL 330
T +++ACA L L G++++A + GI N ++ S+L+DMY KC + A+ +FD
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 331 GDKNSVSWTAMLSAYCQN---KEYEAVFELVRERGV-SDLYAFGTVLRACSGVAAVMLGK 386
G N AM S Y + +E VF L+ + GV D + + + +CS + ++ GK
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357
Query: 387 EVHCQYVRKG--GWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQ 444
H +R G W ++ +AL+D+Y KC D A R+F M + +TWN+++ G +
Sbjct: 358 SCHGYVLRNGFESWDNIC--NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVE 415
Query: 445 NGRGTEVLELFEDMI--------------------------------KEGMEPDYITFIG 472
NG E FE M +EG+ D +T +
Sbjct: 416 NGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMS 475
Query: 473 VLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCR 532
+ AC H G +D ++ +++ GI+ V ++D+ R E A S+ + R
Sbjct: 476 IASACGHLGALDLA-KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR 534
Query: 533 YDHSLWAVLLGACTKCSDYVTAERVARKMIE--LEPD 567
D S W +GA + A + MIE L+PD
Sbjct: 535 -DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 102/204 (50%), Gaps = 7/204 (3%)
Query: 42 GSL-RQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRF 100
GSL +A+ + + Q+ N V S+ C + ++ + K+GI D
Sbjct: 447 GSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVR 506
Query: 101 VGNSLLTLYLKLGPHLPQ-AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLD 159
+G +L+ ++ + G P+ A ++F+SL RD+ AWT+ I A AG +++LF M++
Sbjct: 507 LGTTLVDMFSRCGD--PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Query: 160 LDMEPNAFTISSVITAASKLRDLALGA-CLHAMVISRGFHSNTVISSALVDMYGRNRAVR 218
++P+ +TA S + G ++M+ G V +VD+ GR +
Sbjct: 565 QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLE 624
Query: 219 DALKLFDESP-EPEDVVGWTAIIS 241
+A++L ++ P EP DV+ W ++++
Sbjct: 625 EAVQLIEDMPMEPNDVI-WNSLLA 647
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 305 bits (780), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 174/562 (30%), Positives = 305/562 (54%), Gaps = 10/562 (1%)
Query: 60 PNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQA 119
PN + L S+L+ CT+ G +H + LKSG + N L+ +Y K L A
Sbjct: 3 PNQRQNL-VSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPL-MA 60
Query: 120 QTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKL 179
+FDS+ R++++W++L+S + G SL LFS+M + PN FT S+ + A L
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 180 RDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAI 239
L G +H + GF + ++LVDMY + + +A K+F + ++ W A+
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVD-RSLISWNAM 179
Query: 240 ISTLTRNDMFREALRLFVAMHRG-CGLVPDGFTFGTLLAACANLGWLRQGKELHAKVV-- 296
I+ +AL F M PD FT +LL AC++ G + GK++H +V
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 239
Query: 297 GLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEY-EA-- 353
G + + SL+D+Y KCG + AR FD++ +K +SW++++ Y Q E+ EA
Sbjct: 240 GFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMG 299
Query: 354 VFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYA 412
+F+ ++E D +A +++ + A + GK++ V+ + V +++VD+Y
Sbjct: 300 LFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYL 359
Query: 413 KCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIG 472
KCG VD A++ F M++++ I+W +I G ++G G + + +F +M++ +EPD + ++
Sbjct: 360 KCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLA 419
Query: 473 VLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCR 532
VL ACSH+G++ EG F+ +++ +GIKP VEHY C++DLLGRA ++EA+ L++ +
Sbjct: 420 VLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIK 479
Query: 533 YDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIR 592
+ +W LL C D + V + ++ ++ +YV++ N+Y G WN+ R
Sbjct: 480 PNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNAR 539
Query: 593 KLMEDRGVKKLPGKSWIGSENQ 614
+L +G+KK G SW+ E +
Sbjct: 540 ELGNIKGLKKEAGMSWVEIERE 561
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 305 bits (780), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 177/563 (31%), Positives = 307/563 (54%), Gaps = 18/563 (3%)
Query: 58 LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLP 117
L P+ + + S+L+ C + + G +H ALK G D +V SL+ LY + +
Sbjct: 149 LTPDYRT--FPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKA-VG 202
Query: 118 QAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAAS 177
A+ LFD + VRD+ +W ++IS Y ++G +L L + + +D + T+ S+++A +
Sbjct: 203 NARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMD----SVTVVSLLSACT 258
Query: 178 KLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWT 237
+ D G +H+ I G S +S+ L+D+Y +RD K+FD D++ W
Sbjct: 259 EAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM-YVRDLISWN 317
Query: 238 AIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVG 297
+II N+ A+ LF M R + PD T +L + + LG +R + + +
Sbjct: 318 SIIKAYELNEQPLRAISLFQEM-RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLR 376
Query: 298 LG-ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEA 353
G ++ + ++++ MY K G V AR VF+ L + + +SW ++S Y QN E
Sbjct: 377 KGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIE 436
Query: 354 VFELVRERG--VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLY 411
++ ++ E G ++ + +VL ACS A+ G ++H + ++ G + DV V ++L D+Y
Sbjct: 437 MYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMY 496
Query: 412 AKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFI 471
KCG ++ A LF + N + WN +I +G G + + LF++M+ EG++PD+ITF+
Sbjct: 497 GKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFV 556
Query: 472 GVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADC 531
+L ACSH+GLVDEG+ F +M +YGI P ++HY CM+D+ GRA +E A +++
Sbjct: 557 TLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSL 616
Query: 532 RYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEI 591
+ D S+W LL AC + + + + E+EP+ +VLL N+Y + G+W EI
Sbjct: 617 QPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEI 676
Query: 592 RKLMEDRGVKKLPGKSWIGSENQ 614
R + +G++K PG S + +N+
Sbjct: 677 RSIAHGKGLRKTPGWSSMEVDNK 699
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 234/459 (50%), Gaps = 38/459 (8%)
Query: 30 STDSEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAH 89
S ++ I +C+ G+ ++AL L N + + V SLL CT+ F G T+H++
Sbjct: 218 SWNAMISGYCQSGNAKEALTLSNGLRA-----MDSVTVVSLLSACTEAGDFNRGVTIHSY 272
Query: 90 ALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPIN 149
++K G+ S+ FV N L+ LY + G L Q +FD + VRD+I+W S+I AY +P+
Sbjct: 273 SIKHGLESELFVSNKLIDLYAEFG-RLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLR 331
Query: 150 SLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRG-FHSNTVISSALV 208
++ LF +M ++P+ T+ S+ + S+L D+ + + +G F + I +A+V
Sbjct: 332 AISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVV 391
Query: 209 DMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPD 268
MY + V A +F+ P DV+ W IIS +N EA+ ++ M + +
Sbjct: 392 VMYAKLGLVDSARAVFNWLPNT-DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 269 GFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFD 328
T+ ++L AC+ G LRQG +LH +++ G+ +V V +SL DMYGKCG++ A +F
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFY 510
Query: 329 RLGDKNSVSWTAMLSAYCQNKEYEAVFELVRE---RGVS-DLYAFGTVLRACSGVAAVML 384
++ NSV W +++ + + E L +E GV D F T+L ACS
Sbjct: 511 QIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS------- 563
Query: 385 GKEVHCQYVRKGGWRDVIVES------------ALVDLYAKCGCVDFAQRLFLSMEVRNQ 432
H V +G W ++++ +VD+Y + G ++ A + SM ++
Sbjct: 564 ----HSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD 619
Query: 433 IT-WNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITF 470
+ W A++ +G ++ ++ + + E +EP+++ +
Sbjct: 620 ASIWGALLSACRVHG-NVDLGKIASEHLFE-VEPEHVGY 656
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 145/517 (28%), Positives = 258/517 (49%), Gaps = 27/517 (5%)
Query: 69 SLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAV 128
+L + CT S LHA + S + + L+ LY LG ++ A+ FD +
Sbjct: 59 TLFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLG-NVALARHTFDHIQN 114
Query: 129 RDIIAWTSLISAYTRAGRPINSLQLFSQ-MLDLDMEPNAFTISSVITAASKLRDLALGAC 187
RD+ AW +IS Y RAG ++ FS ML + P+ T SV+ A + D G
Sbjct: 115 RDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNK 171
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRND 247
+H + + GF + ++++L+ +Y R +AV +A LFDE P D+ W A+IS ++
Sbjct: 172 IHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMP-VRDMGSWNAMISGYCQSG 230
Query: 248 MFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVE 307
+EAL L + D T +LL+AC G +G +H+ + G+ + V
Sbjct: 231 NAKEALTLSNGLR-----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVS 285
Query: 308 SSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLY 367
+ L+D+Y + G++ + VFDR+ ++ +SW +++ AY N++ L +E +S +
Sbjct: 286 NKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ 345
Query: 368 AFGTVLRACSGVAAVMLGKEVHCQYVR----KGGW--RDVIVESALVDLYAKCGCVDFAQ 421
L + + + + LG C+ V+ + GW D+ + +A+V +YAK G VD A+
Sbjct: 346 PDCLTLISLASILS-QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSAR 404
Query: 422 RLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEG-MEPDYITFIGVLFACSHT 480
+F + + I+WN +I G AQNG +E +E++ M +EG + + T++ VL ACS
Sbjct: 405 AVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQA 464
Query: 481 GLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAV 540
G + +G + ++ G+ V + D+ G+ +E+A SL R + W
Sbjct: 465 GALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNT 522
Query: 541 LLGACTKCSDYVTAERVARKMIE--LEPDFHLSYVLL 575
L+ A + ++M++ ++PD H+++V L
Sbjct: 523 LIACHGFHGHGEKAVMLFKEMLDEGVKPD-HITFVTL 558
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 146/313 (46%), Gaps = 4/313 (1%)
Query: 169 ISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESP 228
I V T +L CLHA ++ N IS+ LV++Y V A FD
Sbjct: 54 IDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDH-I 112
Query: 229 EPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQG 288
+ DV W +IS R E +R F GL PD TF ++L AC + G
Sbjct: 113 QNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT---VIDG 169
Query: 289 KELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN 348
++H + G +V V +SL+ +Y + VG AR++FD + ++ SW AM+S YCQ+
Sbjct: 170 NKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQS 229
Query: 349 KEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALV 408
+ L D ++L AC+ G +H ++ G ++ V + L+
Sbjct: 230 GNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLI 289
Query: 409 DLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYI 468
DLYA+ G + Q++F M VR+ I+WN++I N + + LF++M ++PD +
Sbjct: 290 DLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCL 349
Query: 469 TFIGVLFACSHTG 481
T I + S G
Sbjct: 350 TLISLASILSQLG 362
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 177/526 (33%), Positives = 290/526 (55%), Gaps = 33/526 (6%)
Query: 103 NSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQ-----M 157
N++L+ Y + G + A+++FD + ++ ++W +L+SAY + + + LF +
Sbjct: 161 NTMLSGYAQNGC-VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL 219
Query: 158 LDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAV 217
+ + F I A + D +M + NT+I+ Y ++ +
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFD--------SMNVRDVVSWNTIITG-----YAQSGKI 266
Query: 218 RDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLA 277
+A +LFDESP +DV WTA++S +N M EA LF M + ++ +LA
Sbjct: 267 DEARQLFDESP-VQDVFTWTAMVSGYIQNRMVEEARELFDKMPE-----RNEVSWNAMLA 320
Query: 278 ACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVS 337
+ KEL + C NV ++++ Y +CGK+ +A+ +FD++ ++ VS
Sbjct: 321 GYVQGERMEMAKEL----FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS 376
Query: 338 WTAMLSAYCQN-KEYEAV---FELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYV 393
W AM++ Y Q+ +EA+ ++ RE G + +F + L C+ V A+ LGK++H + V
Sbjct: 377 WAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV 436
Query: 394 RKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLE 453
+ G V +AL+ +Y KCG ++ A LF M ++ ++WN MI G +++G G L
Sbjct: 437 KGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALR 496
Query: 454 LFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLL 513
FE M +EG++PD T + VL ACSHTGLVD+GR+YF M +YG+ P +HY CM+DLL
Sbjct: 497 FFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLL 556
Query: 514 GRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYV 573
GRA ++E+A +L++N D ++W LLGA + AE A K+ +EP+ YV
Sbjct: 557 GRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYV 616
Query: 574 LLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQKGSLS 619
LL N+Y + GRW D ++R M D+GVKK+PG SWI +N+ + S
Sbjct: 617 LLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFS 662
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 201/431 (46%), Gaps = 36/431 (8%)
Query: 103 NSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDM 162
N ++ Y++ G +A +F + +++ +IS Y R G + +LF +M + D+
Sbjct: 68 NVAISSYMRTG-RCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL 126
Query: 163 EPNAFTISSVITAASKLRDLALGACLHAMVISRGFHS-NTVISSALVDMYGRNRAVRDAL 221
+ + +I + R+L L ++ R S NT++S Y +N V DA
Sbjct: 127 ----VSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSG-----YAQNGCVDDAR 177
Query: 222 KLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACAN 281
+FD PE D V W A++S +N EA LF + LV ++ LL
Sbjct: 178 SVFDRMPEKND-VSWNALLSAYVQNSKMEEACMLFKS-RENWALV----SWNCLLG---- 227
Query: 282 LGWLRQGKELHAKVVGLGI-CGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTA 340
G++++ K + A+ + +VV ++++ Y + GK+ +AR +FD ++ +WTA
Sbjct: 228 -GFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTA 286
Query: 341 MLSAYCQNKEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVH----CQYVRKG 396
M+S Y QN+ E EL + + ++ +L + + KE+ C
Sbjct: 287 MVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPC------ 340
Query: 397 GWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFE 456
R+V + ++ YA+CG + A+ LF M R+ ++W AMI G +Q+G E L LF
Sbjct: 341 --RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 457 DMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRA 516
M +EG + +F L C+ ++ G++ +V + G + G N ++ + +
Sbjct: 399 QMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV-KGGYETGCFVGNALLLMYCKC 457
Query: 517 EMIEEAESLLE 527
IEEA L +
Sbjct: 458 GSIEEANDLFK 468
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 150/356 (42%), Gaps = 44/356 (12%)
Query: 232 DVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANL--------- 282
D+ W IS+ R EALR+F M R + +G G L L
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 283 ------------GWLR-----QGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARV 325
G++R + +EL + +C +++L Y + G V AR
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCS----WNTMLSGYAQNGCVDDARS 178
Query: 326 VFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLG 385
VFDR+ +KN VSW A+LSAY QN + E L + R L ++ +L ++
Sbjct: 179 VFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEA 238
Query: 386 KEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQN 445
+ Q+ RDV+ + ++ YA+ G +D A++LF V++ TW AM+ G QN
Sbjct: 239 R----QFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQN 294
Query: 446 GRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEH 505
E ELF+ M E + +++ +L ++ + F +M V
Sbjct: 295 RMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR-----NVST 345
Query: 506 YNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKM 561
+N MI + I EA++L + R D WA ++ ++ A R+ +M
Sbjct: 346 WNTMITGYAQCGKISEAKNLFDKMPKR-DPVSWAAMIAGYSQSGHSFEALRLFVQM 400
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 2/175 (1%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
++S L TC + G LH +K G + FVGN+LL +Y K G + +A LF +
Sbjct: 412 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS-IEEANDLFKEM 470
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALG- 185
A +DI++W ++I+ Y+R G +L+ F M ++P+ T+ +V++A S + G
Sbjct: 471 AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR 530
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAII 240
+ M G N+ + +VD+ GR + DA L P D W ++
Sbjct: 531 QYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 585
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 130/293 (44%), Gaps = 50/293 (17%)
Query: 303 NVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERG 362
NV + S Y + G+ +A VF R+ +SVS+ M+S Y +N E+E +L E
Sbjct: 68 NVAISS-----YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 363 VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQR 422
DL ++ +++ V LGK + RDV + ++ YA+ GCVD A+
Sbjct: 123 ERDLVSWNVMIKGY--VRNRNLGKARELFEIMPE--RDVCSWNTMLSGYAQNGCVDDARS 178
Query: 423 LFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFED--------------------MIKEG 462
+F M +N ++WNA++ QN + E LF+ I E
Sbjct: 179 VFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEA 238
Query: 463 ME-------PDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGR 515
+ D +++ ++ + +G +DE R+ F DE ++ V + M+ +
Sbjct: 239 RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF----DESPVQD-VFTWTAMVSGYIQ 293
Query: 516 AEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAER--VARKMIELEP 566
M+EEA L + R + S A+L G YV ER +A+++ ++ P
Sbjct: 294 NRMVEEARELFDKMPERNEVSWNAMLAG-------YVQGERMEMAKELFDVMP 339
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 174/547 (31%), Positives = 301/547 (55%), Gaps = 11/547 (2%)
Query: 71 LQTCTKTSSFLHGTTLHAHALKS-GIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVR 129
L+ C + +G +H K + SD +VG+SL+ +Y+K G + +A +FD L
Sbjct: 67 LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCG-RMIEALRMFDELEKP 125
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQM-LDLDMEPNAFTISSVITAASKLRDLALGACL 188
DI+ W+S++S + + G P +++ F +M + D+ P+ T+ ++++A +KL + LG C+
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 189 HAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDM 248
H VI RGF ++ + ++L++ Y ++RA ++A+ LF E +DV+ W+ +I+ +N
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAE-KDVISWSTVIACYVQNGA 244
Query: 249 FREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVES 308
EAL +F M G P+ T +L ACA L QG++ H + G+ V V +
Sbjct: 245 AAEALLVFNDMMDD-GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVST 303
Query: 309 SLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFE-----LVRERGV 363
+L+DMY KC +A VF R+ K+ VSW A++S + N E L+
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR 363
Query: 364 SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRL 423
D VL +CS + + K H ++ G + + ++LV+LY++CG + A ++
Sbjct: 364 PDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKV 423
Query: 424 FLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEG-MEPDYITFIGVLFACSHTGL 482
F + +++ + W ++I G +G+GT+ LE F M+K ++P+ +TF+ +L ACSH GL
Sbjct: 424 FNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGL 483
Query: 483 VDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLL 542
+ EG R F LMV++Y + P +EHY ++DLLGR ++ A + + + LL
Sbjct: 484 IHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLL 543
Query: 543 GACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKK 602
GAC + AE VA+K+ ELE + Y+L+ N+Y G W + ++R ++ RG+KK
Sbjct: 544 GACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKK 603
Query: 603 LPGKSWI 609
+S I
Sbjct: 604 GLAESLI 610
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 220/470 (46%), Gaps = 34/470 (7%)
Query: 40 KDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDR 99
K+GS QA+ D V +L+ CTK S+ G +H ++ G +D
Sbjct: 139 KNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDL 198
Query: 100 FVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLD 159
+ NSLL Y K +A LF +A +D+I+W+++I+ Y + G +L +F+ M+D
Sbjct: 199 SLVNSLLNCYAK-SRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMD 257
Query: 160 LDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRD 219
EPN T+ V+ A + DL G H + I +G + +S+ALVDMY + + +
Sbjct: 258 DGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEE 317
Query: 220 ALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAAC 279
A +F P +DVV W A+IS T N M ++ F M PD +L +C
Sbjct: 318 AYAVFSRIPR-KDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSC 376
Query: 280 ANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWT 339
+ LG+L Q K H+ V+ G N + +SL+++Y +CG +G A VF+ + K++V WT
Sbjct: 377 SELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWT 436
Query: 340 AMLSAYCQN----KEYEAVFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVR 394
++++ Y + K E +V+ V + F ++L ACS + G + V
Sbjct: 437 SLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVN 496
Query: 395 KGGWRDVIVESA-LVDLYAKCGCVDFAQRLFLSMEVRNQITWNA---MIGGLAQNGRGTE 450
+ A LVDL + G +D A +E+ ++ ++ ++G L R +
Sbjct: 497 DYRLAPNLEHYAVLVDLLGRVGDLDTA------IEITKRMPFSPTPQILGTLLGACRIHQ 550
Query: 451 VLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIK 500
E+ E + K+ E +H G Y+ LM + YG+K
Sbjct: 551 NGEMAETVAKKLFE----------LESNHAG-------YYMLMSNVYGVK 583
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 216/432 (50%), Gaps = 13/432 (3%)
Query: 119 AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASK 178
A+ +F + R + W +L+ + +R + L FS M + +P+ FT+ + A +
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 179 LRDLALGACLHAMV---ISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVG 235
LR++ G +H V ++ G S+ + S+L+ MY + + +AL++FDE +P D+V
Sbjct: 73 LREVNYGEMIHGFVKKDVTLG--SDLYVGSSLIYMYIKCGRMIEALRMFDELEKP-DIVT 129
Query: 236 WTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV 295
W++++S +N +A+ F M + PD T TL++AC L R G+ +H V
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Query: 296 VGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN---KEYE 352
+ G ++ + +SLL+ Y K +A +F + +K+ +SW+ +++ Y QN E
Sbjct: 190 IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEAL 249
Query: 353 AVFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLY 411
VF + + G ++ VL+AC+ + G++ H +RKG +V V +ALVD+Y
Sbjct: 250 LVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMY 309
Query: 412 AKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKE-GMEPDYITF 470
KC + A +F + ++ ++W A+I G NG +E F M+ E PD I
Sbjct: 310 MKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILM 369
Query: 471 IGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENAD 530
+ VL +CS G +++ + + + ++ +YG +++L R + A + N
Sbjct: 370 VKVLGSCSELGFLEQAKCFHSYVI-KYGFDSNPFIGASLVELYSRCGSLGNASKVF-NGI 427
Query: 531 CRYDHSLWAVLL 542
D +W L+
Sbjct: 428 ALKDTVVWTSLI 439
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 175/530 (33%), Positives = 291/530 (54%), Gaps = 10/530 (1%)
Query: 86 LHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAG 145
LH A+ G D V NS+L LY K H+ A+ LFD + RD+++W ++IS Y G
Sbjct: 166 LHDFAVIYGFDCDIAVMNSMLNLYCKC-DHVGDAKDLFDQMEQRDMVSWNTMISGYASVG 224
Query: 146 RPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISS 205
L+L +M + P+ T + ++ + + DL +G LH ++ GF + + +
Sbjct: 225 NMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKT 284
Query: 206 ALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAM-HRGCG 264
AL+ MY + + ++ + P +DVV WT +IS L R +AL +F M G
Sbjct: 285 ALITMYLKCGKEEASYRVLETIPN-KDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSD 343
Query: 265 LVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQAR 324
L + +++A+CA LG G +H V+ G + +SL+ MY KCG + ++
Sbjct: 344 LSSEAI--ASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSL 401
Query: 325 VVFDRLGDKNSVSWTAMLSAYCQNKEYEA---VFELVRERGVSDLYAFGTV--LRACSGV 379
V+F+R+ +++ VSW A++S Y QN + +FE ++ + V + +F V L+ACS
Sbjct: 402 VIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSA 461
Query: 380 AAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMI 439
A+ +GK +HC +R +V++ALVD+Y+KCG ++ AQR F S+ ++ ++W +I
Sbjct: 462 GALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILI 521
Query: 440 GGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGI 499
G +G+G LE++ + + GMEP+++ F+ VL +CSH G+V +G + F+ MV ++G+
Sbjct: 522 AGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGV 581
Query: 500 KPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVAR 559
+P EH C++DLL RA+ IE+A + R + ++L AC + +
Sbjct: 582 EPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICE 641
Query: 560 KMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
MIEL+P YV LG+ + A+ RW+D E M G+KKLPG S I
Sbjct: 642 DMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKI 691
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 147/504 (29%), Positives = 255/504 (50%), Gaps = 17/504 (3%)
Query: 49 HLLNTSQTTLDPNLKP--VLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLL 106
+L+T + L L P + SLL+ C G ++H L +G SD ++ +SL+
Sbjct: 29 QVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLV 88
Query: 107 TLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNA 166
LY K G L A+ +F+ + RD++ WT++I Y+RAG + L ++M ++P
Sbjct: 89 NLYAKFGL-LAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGP 147
Query: 167 FTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDE 226
T+ +++ ++ L CLH + GF + + ++++++Y + V DA LFD+
Sbjct: 148 VTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQ 204
Query: 227 SPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLR 286
E D+V W +IS E L+L M RG GL PD TFG L+ + L
Sbjct: 205 M-EQRDMVSWNTMISGYASVGNMSEILKLLYRM-RGDGLRPDQQTFGASLSVSGTMCDLE 262
Query: 287 QGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYC 346
G+ LH ++V G ++ ++++L+ MY KCGK + V + + +K+ V WT M+S
Sbjct: 263 MGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLM 322
Query: 347 QNKEYEA---VFELVRERGVSDLY--AFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDV 401
+ E VF + + G SDL A +V+ +C+ + + LG VH +R G D
Sbjct: 323 RLGRAEKALIVFSEMLQSG-SDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDT 381
Query: 402 IVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDM-IK 460
++L+ +YAKCG +D + +F M R+ ++WNA+I G AQN + L LFE+M K
Sbjct: 382 PALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFK 441
Query: 461 EGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIE 520
+ D T + +L ACS G + G+ +++ + I+P ++D+ + +E
Sbjct: 442 TVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLE 500
Query: 521 EAESLLENADCRYDHSLWAVLLGA 544
A+ ++ + D W +L+
Sbjct: 501 AAQRCFDSISWK-DVVSWGILIAG 523
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 123/232 (53%), Gaps = 2/232 (0%)
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG 299
I+ L+ + ++ L F +M L+PD FTF +LL ACA+L L G +H +V+ G
Sbjct: 18 INHLSSHGDHKQVLSTFSSMLAN-KLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNG 76
Query: 300 ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVR 359
+ + SSL+++Y K G + AR VF+ + +++ V WTAM+ Y + LV
Sbjct: 77 FSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVN 136
Query: 360 ERGVSDLYAFG-TVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
E + T+L SGV + + +H V G D+ V +++++LY KC V
Sbjct: 137 EMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVG 196
Query: 419 FAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITF 470
A+ LF ME R+ ++WN MI G A G +E+L+L M +G+ PD TF
Sbjct: 197 DAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTF 248
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 190/606 (31%), Positives = 312/606 (51%), Gaps = 47/606 (7%)
Query: 43 SLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVG 102
SL + + N +Q T N + + SL++ C S H H +++G SD +
Sbjct: 11 SLPRHPNFSNPNQPTT--NNERSRHISLIERCV---SLRQLKQTHGHMIRTGTFSDPYSA 65
Query: 103 NSLLTLY-LKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQML-DL 160
+ L + L L A+ +FD + + AW +LI AY P+ S+ F M+ +
Sbjct: 66 SKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSES 125
Query: 161 DMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDA 220
PN +T +I AA+++ L+LG LH M + S+ ++++L+ Y + A
Sbjct: 126 QCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSA 185
Query: 221 LKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACA 280
K+F E +DVV W ++I+ + +AL LF M + T +L+ACA
Sbjct: 186 CKVFTTIKE-KDVVSWNSMINGFVQKGSPDKALELFKKMESE-DVKASHVTMVGVLSACA 243
Query: 281 NLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTA 340
+ L G+++ + + + N+ + +++LDMY KCG + A+ +FD + +K++V+WT
Sbjct: 244 KIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTT 303
Query: 341 MLSAYCQNKEYEAVFELVRERGVSDLYAFG------------------------------ 370
ML Y +++YEA E++ D+ A+
Sbjct: 304 MLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKL 363
Query: 371 ------TVLRACSGVAAVMLGKEVHCQYVRKGGWR-DVIVESALVDLYAKCGCVDFAQRL 423
+ L AC+ V A+ LG+ +H Y++K G R + V SAL+ +Y+KCG ++ ++ +
Sbjct: 364 NQITLVSTLSACAQVGALELGRWIH-SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREV 422
Query: 424 FLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLV 483
F S+E R+ W+AMIGGLA +G G E +++F M + ++P+ +TF V ACSHTGLV
Sbjct: 423 FNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLV 482
Query: 484 DEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLG 543
DE F M YGI P +HY C++D+LGR+ +E+A +E S+W LLG
Sbjct: 483 DEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLG 542
Query: 544 ACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKL 603
AC ++ AE +++ELEP ++VLL NIY +G+W + E+RK M G+KK
Sbjct: 543 ACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKE 602
Query: 604 PGKSWI 609
PG S I
Sbjct: 603 PGCSSI 608
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 162/349 (46%), Gaps = 38/349 (10%)
Query: 30 STDSEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAH 89
S +S I + GS +AL L ++ D V +L C K + G + ++
Sbjct: 199 SWNSMINGFVQKGSPDKALELFKKMESE-DVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257
Query: 90 ALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFD------------------------- 124
++ ++ + + N++L +Y K G + A+ LFD
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGS-IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 316
Query: 125 ------SLAVRDIIAWTSLISAYTRAGRPINSLQLFSQM-LDLDMEPNAFTISSVITAAS 177
S+ +DI+AW +LISAY + G+P +L +F ++ L +M+ N T+ S ++A +
Sbjct: 317 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 376
Query: 178 KLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWT 237
++ L LG +H+ + G N ++SAL+ MY + + + ++F+ S E DV W+
Sbjct: 377 QVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFN-SVEKRDVFVWS 435
Query: 238 AIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKEL-HAKVV 296
A+I L + EA+ +F M + P+G TF + AC++ G + + + L H
Sbjct: 436 AMIGGLAMHGCGNEAVDMFYKMQEA-NVKPNGVTFTNVFCACSHTGLVDEAESLFHQMES 494
Query: 297 GLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVS-WTAMLSA 344
GI + ++D+ G+ G + +A + + S S W A+L A
Sbjct: 495 NYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGA 543
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 301 bits (772), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 178/470 (37%), Positives = 261/470 (55%), Gaps = 10/470 (2%)
Query: 150 SLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVD 209
+L L+ +M ++P+ FT + V A +KL ++ +G +H+ + G + I+ +L+
Sbjct: 116 ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIM 175
Query: 210 MYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDG 269
MY + V A KLFDE E D V W ++IS + ++A+ LF M G PD
Sbjct: 176 MYAKCGQVGYARKLFDEITE-RDTVSWNSMISGYSEAGYAKDAMDLFRKMEEE-GFEPDE 233
Query: 270 FTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDR 329
T ++L AC++LG LR G+ L + I + + S L+ MYGKCG + AR VF++
Sbjct: 234 RTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQ 293
Query: 330 LGDKNSVSWTAMLSAYCQNKEYEAVFELVRE---RGVS-DLYAFGTVLRACSGVAAVMLG 385
+ K+ V+WTAM++ Y QN + F+L E GVS D TVL AC V A+ LG
Sbjct: 294 MIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG 353
Query: 386 KEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQN 445
K++ ++ V + LVD+Y KCG V+ A R+F +M V+N+ TWNAMI A
Sbjct: 354 KQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQ 413
Query: 446 GRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEH 505
G E L LF+ M + P ITFIGVL AC H GLV +G RYF M +G+ P +EH
Sbjct: 414 GHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEH 470
Query: 506 YNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIEL- 564
Y +IDLL RA M++EA +E + D + A +LGAC K D E+ R ++E+
Sbjct: 471 YTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMK 530
Query: 565 EPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
E +YV+ N+ + W+++ ++R LM DRGV K PG SWI E +
Sbjct: 531 EAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGE 580
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 137/454 (30%), Positives = 219/454 (48%), Gaps = 23/454 (5%)
Query: 62 LKP--VLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQA 119
LKP Y + C K G ++H+ K G+ D + +SL+ +Y K G + A
Sbjct: 128 LKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCG-QVGYA 186
Query: 120 QTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKL 179
+ LFD + RD ++W S+IS Y+ AG +++ LF +M + EP+ T+ S++ A S L
Sbjct: 187 RKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHL 246
Query: 180 RDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAI 239
DL G L M I++ +T + S L+ MYG+ + A ++F++ + +D V WTA+
Sbjct: 247 GDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIK-KDRVAWTAM 305
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG 299
I+ ++N EA +LF M + G+ PD T T+L+AC ++G L GK++ L
Sbjct: 306 ITVYSQNGKSSEAFKLFFEMEK-TGVSPDAGTLSTVLSACGSVGALELGKQIETHASELS 364
Query: 300 ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYC-QNKEYEAVFELV 358
+ N+ V + L+DMYGKCG+V +A VF+ + KN +W AM++AY Q EA+
Sbjct: 365 LQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFD 424
Query: 359 RERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRK-----GGWRDVIVESALVDLYAK 413
R F VL AC V G C+Y + G + + ++DL ++
Sbjct: 425 RMSVPPSDITFIGVLSACVHAGLVHQG----CRYFHEMSSMFGLVPKIEHYTNIIDLLSR 480
Query: 414 CGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEP----DYIT 469
G +D A + A I G + + E M+ E E +Y+
Sbjct: 481 AGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVI 540
Query: 470 FIGVLFACSHTGLVDEGRRYFALMVDEYGIK-PG 502
VL + + DE + ALM D +K PG
Sbjct: 541 SSNVL---ADMKMWDESAKMRALMRDRGVVKTPG 571
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 154/341 (45%), Gaps = 52/341 (15%)
Query: 272 FGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLG 331
F LL C ++ LRQ + A++ + +V + L+ + G + +F
Sbjct: 40 FLFLLKKCISVNQLRQ---IQAQM----LLHSVEKPNFLIPKAVELGDFNYSSFLFSVTE 92
Query: 332 DKNSVSWTAMLSAYCQN-KEYEAVFELVRERGVS----DLYAFGTVLRACSGVAAVMLGK 386
+ N S+ M+ ++EA L R S D + + V AC+ + + +G+
Sbjct: 93 EPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGR 152
Query: 387 EVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNG 446
VH + G RDV + +L+ +YAKCG V +A++LF + R+ ++WN+MI G ++ G
Sbjct: 153 SVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAG 212
Query: 447 RGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGI--KPGVE 504
+ ++LF M +EG EPD T + +L ACSH G + GR +++E I K G+
Sbjct: 213 YAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGR-----LLEEMAITKKIGLS 267
Query: 505 HYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIEL 564
+ L + L+ KC D +A RV +MI+
Sbjct: 268 TF------------------------------LGSKLISMYGKCGDLDSARRVFNQMIKK 297
Query: 565 EPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPG 605
+ +++ + +Y G+ ++A ++ ME GV G
Sbjct: 298 D---RVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAG 335
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 290/532 (54%), Gaps = 8/532 (1%)
Query: 83 GTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYT 142
G +H +KSG D V +SL+ +Y K + +FD + RD+ +W ++IS +
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNL-FENSLQVFDEMPERDVASWNTVISCFY 184
Query: 143 RAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTV 202
++G +L+LF +M EPN+ +++ I+A S+L L G +H + +GF +
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 203 ISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRG 262
++SALVDMYG+ + A ++F + P + +V W ++I + + + M
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPR-KSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE 303
Query: 263 CGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQ 322
G P T ++L AC+ L GK +H V+ + ++ V SL+D+Y KCG+
Sbjct: 304 -GTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANL 362
Query: 323 ARVVFDRLGDKNSVSWTAMLSAYCQ----NKEYEAVFELVRERGVSDLYAFGTVLRACSG 378
A VF + + SW M+S+Y K E ++V D+ F +VL ACS
Sbjct: 363 AETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQ 422
Query: 379 VAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAM 438
+AA+ GK++H D ++ SAL+D+Y+KCG A R+F S+ ++ ++W M
Sbjct: 423 LAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVM 482
Query: 439 IGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYG 498
I +G+ E L F++M K G++PD +T + VL AC H GL+DEG ++F+ M +YG
Sbjct: 483 ISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYG 542
Query: 499 IKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHS-LWAVLLGACTKCSDYVTAERV 557
I+P +EHY+CMID+LGRA + EA +++ D++ L + L AC ++ +R+
Sbjct: 543 IEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRI 602
Query: 558 ARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
AR ++E PD +Y++L N+Y + W+ A +R M++ G++K PG SWI
Sbjct: 603 ARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWI 654
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 142/483 (29%), Positives = 250/483 (51%), Gaps = 12/483 (2%)
Query: 69 SLLQTCTKTSSFLHGTTL-HAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLA 127
SLL+ CT ++ L L H L G+ D + SL+ +Y H A+ +F++
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHC-SARHVFENFD 66
Query: 128 VR-DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDM-EPNAFTISSVITAASKLRDLALG 185
+R D+ W SL+S Y++ ++L++F ++L+ + P++FT +VI A L LG
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLG 126
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTR 245
+H +V+ G+ + V++S+LV MY + ++L++FDE PE DV W +IS +
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPE-RDVASWNTVISCFYQ 185
Query: 246 NDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV 305
+ +AL LF M G P+ + ++AC+ L WL +GKE+H K V G +
Sbjct: 186 SGEAEKALELFGRMESS-GFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVR----ER 361
V S+L+DMYGKC + AR VF ++ K+ V+W +M+ Y + ++ E++ E
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 362 GVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
++L ACS ++ GK +H +R D+ V +L+DLY KCG + A+
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364
Query: 422 RLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG 481
+F + +WN MI G + +E+++ M+ G++PD +TF VL ACS
Sbjct: 365 TVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLA 424
Query: 482 LVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVL 541
+++G++ L + E ++ + ++D+ + +EA + N+ + D W V+
Sbjct: 425 ALEKGKQ-IHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIF-NSIPKKDVVSWTVM 482
Query: 542 LGA 544
+ A
Sbjct: 483 ISA 485
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 190/418 (45%), Gaps = 40/418 (9%)
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRND 247
+H +++ G + V+ +L+++Y + A +F+ DV W +++S ++N
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 248 MFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVE 307
MF + L +F + VPD FTF ++ A LG G+ +H VV G +VVV
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVA 145
Query: 308 SSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDL- 366
SSL+ MY K + VFD + +++ SW ++S + Q+ E E EL S
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE 205
Query: 367 ---YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRL 423
+ + ACS + + GKE+H + V+KG D V SALVD+Y KC C++ A+ +
Sbjct: 206 PNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREV 265
Query: 424 FLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLV 483
F M ++ + WN+MI G G +E+ MI EG P T +L ACS + +
Sbjct: 266 FQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNL 325
Query: 484 DEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLG 543
G+ + Y I+ V NAD + SL +
Sbjct: 326 LHGK-----FIHGYVIRSVV------------------------NADIYVNCSLIDLYF- 355
Query: 544 ACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
KC + AE V K + D S+ ++ + Y +VG W A+E+ M GVK
Sbjct: 356 ---KCGEANLAETVFSKT---QKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVK 407
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 177/576 (30%), Positives = 299/576 (51%), Gaps = 71/576 (12%)
Query: 98 DRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQM 157
D + N +++ + K G L A+ LF+++ +D++ SL+ Y G +L+LF +
Sbjct: 123 DGYSWNVVVSGFAKAG-ELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKE- 180
Query: 158 LDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAV 217
L+ +A T+++V+ A ++L L G +HA ++ G ++ ++S+LV++Y + +
Sbjct: 181 --LNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDL 238
Query: 218 RDALKLFDESPEPED------------------------------VVGWTAIISTLTRND 247
R A + ++ EP+D V+ W ++IS N+
Sbjct: 239 RMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANN 298
Query: 248 MFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVE 307
M EAL LF M D T ++ AC LG+L GK++H G+ ++VV
Sbjct: 299 MKMEALVLFNEMRNETR--EDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVA 356
Query: 308 SSLLDMYGKCG-------------------------------KVGQARVVFDRLGDKNSV 336
S+LLDMY KCG ++ A+ VF+R+ +K+ +
Sbjct: 357 STLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLI 416
Query: 337 SWTAMLSAYCQN----KEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQY 392
SW +M + + QN + E ++ + +D + +V+ AC+ ++++ LG++V +
Sbjct: 417 SWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARA 476
Query: 393 VRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVL 452
G D +V S+L+DLY KCG V+ +R+F +M +++ WN+MI G A NG+G E +
Sbjct: 477 TIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAI 536
Query: 453 ELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDL 512
+LF+ M G+ P ITF+ VL AC++ GLV+EGR+ F M ++G P EH++CM+DL
Sbjct: 537 DLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDL 596
Query: 513 LGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSY 572
L RA +EEA +L+E D S+W+ +L C ++ A K+IELEP+ ++Y
Sbjct: 597 LARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAY 656
Query: 573 VLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSW 608
V L I+ G W + +RKLM + V K PG SW
Sbjct: 657 VQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSW 692
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 211/491 (42%), Gaps = 111/491 (22%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSG-IHSDRFVGNSLLTLYLKLGPHLPQAQTLFDS 125
Y LLQ+C+ + + LK G + S V N LL +Y + G + A+ LFD
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGK-MGIARNLFDE 87
Query: 126 LAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALG 185
+ R+ +W ++I Y +G SL+ F DM P RD
Sbjct: 88 MPDRNYFSWNTMIEGYMNSGEKGTSLRFF------DMMPE--------------RD---- 123
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTR 245
G+ N V+S + + + A +LF+ PE +DVV +++
Sbjct: 124 ----------GYSWNVVVSG-----FAKAGELSVARRLFNAMPE-KDVVTLNSLLHGYIL 167
Query: 246 NDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGI----- 300
N EALRLF ++ D T T+L ACA L L+ GK++HA+++ G+
Sbjct: 168 NGYAEEALRLFKELN----FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSK 223
Query: 301 -----------CGNVVVESSLLDM---------------YGKCGKVGQARVVFDRLGDKN 334
CG++ + S +L+ Y CG+V ++R +FDR ++
Sbjct: 224 MNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRC 283
Query: 335 SVSWTAMLSAYCQNK---EYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQ 391
+ W +M+S Y N E +F +R D V+ AC G+ + GK++HC
Sbjct: 284 VILWNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCH 343
Query: 392 YVRKGGWRDVIVESALVDLYAKCGC-------------------------------VDFA 420
+ G D++V S L+D+Y+KCG +D A
Sbjct: 344 ACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDA 403
Query: 421 QRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHT 480
+R+F +E ++ I+WN+M G +QNG E LE F M K + D ++ V+ AC+
Sbjct: 404 KRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASI 463
Query: 481 GLVDEGRRYFA 491
++ G + FA
Sbjct: 464 SSLELGEQVFA 474
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Query: 58 LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLP 117
LD V +S++ C SS G + A A G+ SD+ V +SL+ LY K G +
Sbjct: 444 LDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCG-FVE 502
Query: 118 QAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAAS 177
+ +FD++ D + W S+IS Y G+ ++ LF +M + P T V+TA +
Sbjct: 503 HGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACN 562
Query: 178 KLRDLALGACL-HAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGW 236
+ G L +M + GF + S +VD+ R V +A+ L +E P D W
Sbjct: 563 YCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMW 622
Query: 237 TAIISTLTRN 246
++I+ N
Sbjct: 623 SSILRGCVAN 632
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 109/243 (44%), Gaps = 45/243 (18%)
Query: 304 VVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEA---VFELVRE 360
V+V + LL MY + GK+G AR +FD + D+N SW M+ Y + E F+++ E
Sbjct: 62 VIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE 121
Query: 361 RGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFA 420
R D Y++ V+ +AK G + A
Sbjct: 122 R---DGYSWNVVVSG-----------------------------------FAKAGELSVA 143
Query: 421 QRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHT 480
+RLF +M ++ +T N+++ G NG E L LF+++ D IT VL AC+
Sbjct: 144 RRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAEL 200
Query: 481 GLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAV 540
+ G++ A ++ G++ + + ++++ + + A +LE DHSL A+
Sbjct: 201 EALKCGKQIHAQILIG-GVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSAL 259
Query: 541 LLG 543
+ G
Sbjct: 260 ISG 262
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 298 bits (763), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 167/535 (31%), Positives = 289/535 (54%), Gaps = 11/535 (2%)
Query: 83 GTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYT 142
G +H L+S D++V N+LL +Y+ G + A+ +FD + RD+I+W ++IS Y
Sbjct: 136 GLVVHGRILRSWFGRDKYVQNALLAMYMNFGK-VEMARDVFDVMKNRDVISWNTMISGYY 194
Query: 143 RAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTV 202
R G ++L +F M++ ++ + TI S++ L+DL +G +H +V +
Sbjct: 195 RNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIE 254
Query: 203 ISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRG 262
+ +ALV+MY + + +A +FD E DV+ WT +I+ T + AL L M
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFDRM-ERRDVITWTCMINGYTEDGDVENALELCRLMQFE 313
Query: 263 CGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQ 322
G+ P+ T +L++ C + + GK LH V + ++++E+SL+ MY KC +V
Sbjct: 314 -GVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDL 372
Query: 323 ARVVFDRLGDKNSVSWTAMLSAYCQNK---EYEAVFELVRERGVS-DLYAFGTVLRACSG 378
VF ++ W+A+++ QN+ + +F+ +R V ++ ++L A +
Sbjct: 373 CFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAA 432
Query: 379 VAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQ----IT 434
+A + +HC + G + + LV +Y+KCG ++ A ++F ++ +++ +
Sbjct: 433 LADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVL 492
Query: 435 WNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMV 494
W A+I G +G G L++F +M++ G+ P+ ITF L ACSH+GLV+EG F M+
Sbjct: 493 WGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFML 552
Query: 495 DEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTA 554
+ Y HY C++DLLGRA ++EA +L+ ++W LL AC +
Sbjct: 553 EHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLG 612
Query: 555 ERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
E A K+ ELEP+ +YVLL NIY A+GRW D ++R +ME+ G++K PG S I
Sbjct: 613 EMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTI 667
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 209/417 (50%), Gaps = 12/417 (2%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
Y SLL T S LH H + G S + S L++ L H+ A+ LF+ +
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGGRVSGHIL--STLSVTYALCGHITYARKLFEEM 75
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDME--PNAFTISSVITAASKLRDLAL 184
++++ +I Y R G +++ +F +M+ ++ P+ +T V AA +L+ + L
Sbjct: 76 PQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKL 135
Query: 185 GACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLT 244
G +H ++ F + + +AL+ MY V A +FD + DV+ W +IS
Sbjct: 136 GLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFD-VMKNRDVISWNTMISGYY 194
Query: 245 RNDMFREALRLFVAM-HRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGN 303
RN +AL +F M + L D T ++L C +L L G+ +H V +
Sbjct: 195 RNGYMNDALMMFDWMVNESVDL--DHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDK 252
Query: 304 VVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVR---- 359
+ V+++L++MY KCG++ +AR VFDR+ ++ ++WT M++ Y ++ + E EL R
Sbjct: 253 IEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQF 312
Query: 360 ERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDF 419
E + +++ C V GK +H VR+ + D+I+E++L+ +YAKC VD
Sbjct: 313 EGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDL 372
Query: 420 AQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFA 476
R+F + W+A+I G QN ++ L LF+ M +E +EP+ T +L A
Sbjct: 373 CFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 172/350 (49%), Gaps = 22/350 (6%)
Query: 143 RAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTV 202
RA ++S++ + +L N F + I+ LH VI+ G S +
Sbjct: 7 RANNALSSVKQYQSLL------NHFAATQSISKTK---------ALHCHVITGGRVSGHI 51
Query: 203 ISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAM-HR 261
+S+ V Y + A KLF+E P+ ++ + +I R ++ +A+ +F+ M
Sbjct: 52 LSTLSVT-YALCGHITYARKLFEEMPQS-SLLSYNIVIRMYVREGLYHDAISVFIRMVSE 109
Query: 262 GCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVG 321
G VPDG+T+ + A L ++ G +H +++ + V+++LL MY GKV
Sbjct: 110 GVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVE 169
Query: 322 QARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFE-LVRERGVSDLYAFGTVLRACS 377
AR VFD + +++ +SW M+S Y +N + +F+ +V E D ++L C
Sbjct: 170 MARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCG 229
Query: 378 GVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNA 437
+ + +G+ VH K + V++ALV++Y KCG +D A+ +F ME R+ ITW
Sbjct: 230 HLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTC 289
Query: 438 MIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGR 487
MI G ++G LEL M EG+ P+ +T ++ C V++G+
Sbjct: 290 MINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGK 339
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 149/297 (50%), Gaps = 11/297 (3%)
Query: 272 FGTLLAACANLGWLRQGKELHAKVVGLG-ICGNVVVESSLLDMYGKCGKVGQARVVFDRL 330
+ +LL A + + K LH V+ G + G+++ S+L Y CG + AR +F+ +
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGGRVSGHIL--STLSVTYALCGHITYARKLFEEM 75
Query: 331 GDKNSVSWTAMLSAYCQNKEYE---AVF-ELVRE--RGVSDLYAFGTVLRACSGVAAVML 384
+ +S+ ++ Y + Y +VF +V E + V D Y + V +A + ++ L
Sbjct: 76 PQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKL 135
Query: 385 GKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQ 444
G VH + +R RD V++AL+ +Y G V+ A+ +F M+ R+ I+WN MI G +
Sbjct: 136 GLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYR 195
Query: 445 NGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVE 504
NG + L +F+ M+ E ++ D+ T + +L C H ++ GR L V+E + +E
Sbjct: 196 NGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKL-VEEKRLGDKIE 254
Query: 505 HYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKM 561
N ++++ + ++EA + + + R D W ++ T+ D A + R M
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFDRME-RRDVITWTCMINGYTEDGDVENALELCRLM 310
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 151/318 (47%), Gaps = 20/318 (6%)
Query: 38 HCKDGSLRQALHLLNTSQ-TTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIH 96
+ +DG + AL L Q + PN V ASL+ C G LH A++ ++
Sbjct: 294 YTEDGDVENALELCRLMQFEGVRPN--AVTIASLVSVCGDALKVNDGKCLHGWAVRQQVY 351
Query: 97 SDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQ 156
SD + SL+++Y K + +F + W+++I+ + ++L LF +
Sbjct: 352 SDIIIETSLISMYAKC-KRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKR 410
Query: 157 MLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRA 216
M D+EPN T++S++ A + L DL +H + GF S+ ++ LV +Y +
Sbjct: 411 MRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGT 470
Query: 217 VRDALKLFD---ESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFG 273
+ A K+F+ E + +DVV W A+IS + AL++F+ M R G+ P+ TF
Sbjct: 471 LESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRS-GVTPNEITFT 529
Query: 274 TLLAACANLGWLRQGKEL------HAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVF 327
+ L AC++ G + +G L H K + +V D+ G+ G++ +A +
Sbjct: 530 SALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIV-----DLLGRAGRLDEAYNLI 584
Query: 328 DRLG-DKNSVSWTAMLSA 344
+ + S W A+L+A
Sbjct: 585 TTIPFEPTSTVWGALLAA 602
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 298 bits (762), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 295/550 (53%), Gaps = 13/550 (2%)
Query: 66 LYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDS 125
YASL+ + T + +HA L G+ F+ L+ G + A+ +FD
Sbjct: 23 FYASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGD-ITFARQVFDD 78
Query: 126 LAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALG 185
L I W ++I Y+R ++L ++S M + P++FT ++ A S L L +G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPE-DVVGWTAIISTLT 244
+HA V GF ++ + + L+ +Y + R + A +F+ P PE +V WTAI+S
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 245 RNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNV 304
+N EAL +F M R + PD ++L A L L+QG+ +HA VV +G+
Sbjct: 199 QNGEPMEALEIFSQM-RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP 257
Query: 305 VVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN----KEYEAVFELVRE 360
+ SL MY KCG+V A+++FD++ N + W AM+S Y +N + + E++ +
Sbjct: 258 DLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK 317
Query: 361 RGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRD-VIVESALVDLYAKCGCVDF 419
D + + + AC+ V ++ + ++ +YV + +RD V + SAL+D++AKCG V+
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARSMY-EYVGRSDYRDDVFISSALIDMFAKCGSVEG 376
Query: 420 AQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSH 479
A+ +F R+ + W+AMI G +GR E + L+ M + G+ P+ +TF+G+L AC+H
Sbjct: 377 ARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH 436
Query: 480 TGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWA 539
+G+V EG +F M D + I P +HY C+IDLLGRA +++A +++ + ++W
Sbjct: 437 SGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWG 495
Query: 540 VLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRG 599
LL AC K E A+++ ++P YV L N+Y A W+ E+R M+++G
Sbjct: 496 ALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKG 555
Query: 600 VKKLPGKSWI 609
+ K G SW+
Sbjct: 556 LNKDVGCSWV 565
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 186/380 (48%), Gaps = 27/380 (7%)
Query: 38 HCKDGSLRQALHLLNTSQTTLDPNLKP--VLYASLLQTCTKTSSFLHGTTLHAHALKSGI 95
+ ++G +AL + + + ++KP V S+L T G ++HA +K G+
Sbjct: 197 YAQNGEPMEALEIFSQMRKM---DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL 253
Query: 96 HSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFS 155
+ + SL T+Y K G + A+ LFD + ++I W ++IS Y + G ++ +F
Sbjct: 254 EIEPDLLISLNTMYAKCG-QVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312
Query: 156 QMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNR 215
+M++ D+ P+ +I+S I+A +++ L ++ V + + ISSAL+DM+ +
Sbjct: 313 EMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCG 372
Query: 216 AVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTL 275
+V A +FD + + DVV W+A+I + REA+ L+ AM RG G+ P+ TF L
Sbjct: 373 SVEGARLVFDRTLD-RDVVVWSAMIVGYGLHGRAREAISLYRAMERG-GVHPNDVTFLGL 430
Query: 276 LAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNS 335
L AC + G +R+G ++ I + ++D+ G+ G + QA V + +
Sbjct: 431 LMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490
Query: 336 VS-WTAMLSAYCQNKEYEAVFELVRER-------------GVSDLYAFGTVLRACSGVAA 381
V+ W A+LSA C+ + + E ++ +S+LYA + + V
Sbjct: 491 VTVWGALLSA-CKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRV 549
Query: 382 VM----LGKEVHCQYVRKGG 397
M L K+V C +V G
Sbjct: 550 RMKEKGLNKDVGCSWVEVRG 569
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 188/548 (34%), Positives = 298/548 (54%), Gaps = 11/548 (2%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
++ LL+ C S T+ AH LKSG ++ G+ L+ LK G + A+ +FD +
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGFPAE-ISGSKLVDASLKCGD-IDYARQVFDGM 125
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
+ R I+ W SLI+ + R +++++ M+ ++ P+ +T+SSV A S L
Sbjct: 126 SERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQ 185
Query: 187 CLHAMVISRGFH-SNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTR 245
H + + G SN + SALVDMY + R+A KL + E +DVV TA+I ++
Sbjct: 186 RSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREA-KLVLDRVEEKDVVLITALIVGYSQ 244
Query: 246 NDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV 305
EA++ F +M + P+ +T+ ++L +C NL + GK +H +V G +
Sbjct: 245 KGEDTEAVKAFQSMLVE-KVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALA 303
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN-KEYEAVFE---LVRER 361
++SLL MY +C V + VF + N VSWT+++S QN +E A+ E ++R+
Sbjct: 304 SQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDS 363
Query: 362 GVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
+ + + LR CS +A G+++H + G RD S L+DLY KCGC D A+
Sbjct: 364 IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMAR 423
Query: 422 RLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG 481
+F ++ + I+ N MI AQNG G E L+LFE MI G++P+ +T + VL AC+++
Sbjct: 424 LVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSR 483
Query: 482 LVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVL 541
LV+EG F + I +HY CM+DLLGRA +EEAE +L D LW L
Sbjct: 484 LVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEAE-MLTTEVINPDLVLWRTL 541
Query: 542 LGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
L AC AER+ RK++E+EP + +L+ N+Y + G+WN +E++ M+D +K
Sbjct: 542 LSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLK 601
Query: 602 KLPGKSWI 609
K P SW+
Sbjct: 602 KNPAMSWV 609
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 190/423 (44%), Gaps = 24/423 (5%)
Query: 55 QTTLDPNLKP--VLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKL 112
Q+ L ++P YAS+L +C +G +H +KSG S SLLT+YL+
Sbjct: 256 QSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRC 315
Query: 113 GPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSV 172
+ + +F + + ++WTSLIS + GR +L F +M+ ++PN+FT+SS
Sbjct: 316 SL-VDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSA 374
Query: 173 ITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPED 232
+ S L G +H +V GF + S L+D+YG+ A +FD E D
Sbjct: 375 LRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEV-D 433
Query: 233 VVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELH 292
V+ +I + +N REAL LF M GL P+ T ++L AC N + +G EL
Sbjct: 434 VISLNTMIYSYAQNGFGREALDLFERMI-NLGLQPNDVTVLSVLLACNNSRLVEEGCELF 492
Query: 293 AKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYE 352
I + ++D+ G+ G++ +A ++ + + + V W +LSA +++ E
Sbjct: 493 DSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVE 552
Query: 353 AVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYA 412
+ R+ +L G ++ + Y G W VI ++ +
Sbjct: 553 MAERITRK-----------ILEIEPGDEGTLI--LMSNLYASTGKWNRVI------EMKS 593
Query: 413 KCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIG 472
K + + +S N+ T M G L + ++LE E++IK+ + Y+
Sbjct: 594 KMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKS 653
Query: 473 VLF 475
+F
Sbjct: 654 CVF 656
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/500 (35%), Positives = 274/500 (54%), Gaps = 14/500 (2%)
Query: 121 TLFDSLAVR-DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKL 179
TLF+ + D+ +W S+I+ R+G +L FS M L + P + I A S L
Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 180 RDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAI 239
D+ G H G+ S+ +SSAL+ MY + DA K+FDE P+ ++V WT++
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK-RNIVSWTSM 148
Query: 240 ISTLTRNDMFREALRLFVAM-----HRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAK 294
I N +A+ LF + + D ++++AC+ + + +H+
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 295 VVGLGICGNVVVESSLLDMYGKCGK--VGQARVVFDRLGDKNSVSWTAMLSAYCQ----N 348
V+ G V V ++LLD Y K G+ V AR +FD++ DK+ VS+ +++S Y Q N
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSN 268
Query: 349 KEYEAVFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESAL 407
+ +E LV+ + V+ + TVL A S A+ +GK +H Q +R G DVIV +++
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSI 328
Query: 408 VDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDY 467
+D+Y KCG V+ A++ F M+ +N +W AMI G +G + LELF MI G+ P+Y
Sbjct: 329 IDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNY 388
Query: 468 ITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLE 527
ITF+ VL ACSH GL EG R+F M +G++PG+EHY CM+DLLGRA +++A L++
Sbjct: 389 ITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQ 448
Query: 528 NADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWND 587
+ D +W+ LL AC + AE ++ EL+ Y+LL +IY GRW D
Sbjct: 449 RMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKD 508
Query: 588 AMEIRKLMEDRGVKKLPGKS 607
+R +M++RG+ K PG S
Sbjct: 509 VERVRMIMKNRGLVKPPGFS 528
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 198/389 (50%), Gaps = 16/389 (4%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
+ ++ C+ G H A G SD FV ++L+ +Y G L A+ +FD +
Sbjct: 79 FPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGK-LEDARKVFDEI 137
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQML------DLDMEPNAFTISSVITAASKLR 180
R+I++WTS+I Y G ++++ LF +L D M ++ + SVI+A S++
Sbjct: 138 PKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVP 197
Query: 181 DLALGACLHAMVISRGFHSNTVISSALVDMY--GRNRAVRDALKLFDESPEPEDVVGWTA 238
L +H+ VI RGF + + L+D Y G V A K+FD+ + +D V + +
Sbjct: 198 AKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVD-KDRVSYNS 256
Query: 239 IISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGL 298
I+S ++ M EA +F + + + + T T+L A ++ G LR GK +H +V+ +
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 299 GICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFEL- 357
G+ +V+V +S++DMY KCG+V AR FDR+ +KN SWTAM++ Y + EL
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELF 376
Query: 358 --VRERGVSDLY-AFGTVLRACSGVAAVMLG-KEVHCQYVRKGGWRDVIVESALVDLYAK 413
+ + GV Y F +VL ACS + G + + R G + +VDL +
Sbjct: 377 PAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGR 436
Query: 414 CGCVDFAQRLFLSMEVR-NQITWNAMIGG 441
G + A L M+++ + I W++++
Sbjct: 437 AGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 170/337 (50%), Gaps = 19/337 (5%)
Query: 69 SLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGP-HLPQAQTLFDSLA 127
S++ C++ + ++H+ +K G VGN+LL Y K G + A+ +FD +
Sbjct: 188 SVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 128 VRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEP-NAFTISSVITAASKLRDLALGA 186
+D +++ S++S Y ++G + ++F +++ + NA T+S+V+ A S L +G
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
C+H VI G + ++ ++++DMY + V A K FD + ++V WTA+I+ +
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM-KNKNVRSWTAMIAGYGMH 366
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVG-LGICGNVV 305
+AL LF AM G+ P+ TF ++LAAC++ G +G + G G+ +
Sbjct: 367 GHAAKALELFPAM-IDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLE 425
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGDK-NSVSWTAMLSAYCQNKEYEAVFELVRERGVS 364
++D+ G+ G + +A + R+ K +S+ W+++L+A +K E + E V+
Sbjct: 426 HYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVE-----LAEISVA 480
Query: 365 DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDV 401
L+ + S ML + Y G W+DV
Sbjct: 481 RLFELDS-----SNCGYYMLLSHI---YADAGRWKDV 509
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 6/208 (2%)
Query: 62 LKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQT 121
+ +++L + + + G +H ++ G+ D VG S++ +Y K G + A+
Sbjct: 285 FNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCG-RVETARK 343
Query: 122 LFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRD 181
FD + +++ +WT++I+ Y G +L+LF M+D + PN T SV+ A S
Sbjct: 344 AFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGL 403
Query: 182 LALG-ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAII 240
G +AM G +VD+ GR ++ A L D + W++++
Sbjct: 404 HVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLL 463
Query: 241 ST--LTRNDMFRE--ALRLFVAMHRGCG 264
+ + +N E RLF CG
Sbjct: 464 AACRIHKNVELAEISVARLFELDSSNCG 491
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/559 (31%), Positives = 297/559 (53%), Gaps = 14/559 (2%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
Y++ L C + FL G L + +K+G+ SD VGNS +T+Y + G A+ +FD +
Sbjct: 177 YSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGS-FRGARRVFDEM 235
Query: 127 AVRDIIAWTSLISAYTRAGR-PINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALG 185
+ +D+I+W SL+S ++ G ++ +F M+ +E + + +SVIT DL L
Sbjct: 236 SFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLA 295
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTR 245
+H + I RG+ S + + L+ Y + + +F + E +VV WT +IS+ +
Sbjct: 296 RQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSE-RNVVSWTTMISS-NK 353
Query: 246 NDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV 305
+D A+ +F+ M R G+ P+ TF L+ A +++G ++H + G
Sbjct: 354 DD----AVSIFLNM-RFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPS 408
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRERG 362
V +S + +Y K + A+ F+ + + +SW AM+S + QN E +F
Sbjct: 409 VGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAET 468
Query: 363 VSDLYAFGTVLRACSGVA--AVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFA 420
+ + Y FG+VL A + +V G+ H ++ G +V SAL+D+YAK G +D +
Sbjct: 469 MPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDES 528
Query: 421 QRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHT 480
+++F M +NQ W ++I + +G V+ LF MIKE + PD +TF+ VL AC+
Sbjct: 529 EKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRK 588
Query: 481 GLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAV 540
G+VD+G F +M++ Y ++P EHY+CM+D+LGRA ++EAE L+ S+
Sbjct: 589 GMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQS 648
Query: 541 LLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGV 600
+LG+C + +VA +E++P+ SYV + NIY W+ A EIRK M + V
Sbjct: 649 MLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNV 708
Query: 601 KKLPGKSWIGSENQKGSLS 619
K G SWI + +GSL+
Sbjct: 709 SKEAGFSWIDVGDTEGSLT 727
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 172/333 (51%), Gaps = 15/333 (4%)
Query: 62 LKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQT 121
L V + S++ TC + +H +K G S VGN L++ Y K G L ++
Sbjct: 274 LDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGV-LEAVKS 332
Query: 122 LFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRD 181
+F ++ R++++WT++IS+ +++ +F M + PN T +I A
Sbjct: 333 VFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQ 387
Query: 182 LALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIS 241
+ G +H + I GF S + ++ + +Y + A+ DA K F++ E ++ W A+IS
Sbjct: 388 IKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFRE-IISWNAMIS 446
Query: 242 TLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLG--WLRQGKELHAKVVGLG 299
+N EAL++F++ +P+ +TFG++L A A ++QG+ HA ++ LG
Sbjct: 447 GFAQNGFSHEALKMFLSA--AAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLG 504
Query: 300 ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFEL-- 357
+ VV S+LLDMY K G + ++ VF+ + KN WT+++SAY + ++E V L
Sbjct: 505 LNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFH 564
Query: 358 --VRERGVSDLYAFGTVLRACSGVAAVMLGKEV 388
++E DL F +VL AC+ V G E+
Sbjct: 565 KMIKENVAPDLVTFLSVLTACNRKGMVDKGYEI 597
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 204/424 (48%), Gaps = 24/424 (5%)
Query: 119 AQTLFDSLAVRDIIAWTSL---ISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITA 175
A LFD + R+ A TS+ IS R P +L +F + L L ++ A
Sbjct: 27 AHKLFDGSSQRN--ATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLA 84
Query: 176 ASKLR-DLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVV 234
R DL G +H + GF S +S+A++ MY + +AL +F+ +P DVV
Sbjct: 85 LKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDP-DVV 143
Query: 235 GWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAK 294
W I+S N + AL V M + G+V D FT+ T L+ C G +L +
Sbjct: 144 SWNTILSGFDDNQI---ALNFVVRM-KSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQST 199
Query: 295 VVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKE--YE 352
VV G+ ++VV +S + MY + G AR VFD + K+ +SW ++LS Q +E
Sbjct: 200 VVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFE 259
Query: 353 AVF---ELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVD 409
AV +++RE D +F +V+ C + L +++H +++G + V + L+
Sbjct: 260 AVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMS 319
Query: 410 LYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYIT 469
Y+KCG ++ + +F M RN ++W MI + + + +F +M +G+ P+ +T
Sbjct: 320 RYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVT 374
Query: 470 FIGVLFACSHTGLVDEGRRYFALMVDE-YGIKPGVEHYNCMIDLLGRAEMIEEAESLLEN 528
F+G++ A + EG + L + + +P V N I L + E +E+A+ E+
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVG--NSFITLYAKFEALEDAKKAFED 432
Query: 529 ADCR 532
R
Sbjct: 433 ITFR 436
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 141/288 (48%), Gaps = 29/288 (10%)
Query: 50 LLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLY 109
LN + PN V + L+ G +H +K+G S+ VGNS +TLY
Sbjct: 360 FLNMRFDGVYPN--EVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLY 417
Query: 110 LKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTI 169
K L A+ F+ + R+II+W ++IS + + G +L++F M PN +T
Sbjct: 418 AKF-EALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTF 475
Query: 170 SSVITAASKLRDLAL--GACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDES 227
SV+ A + D+++ G HA ++ G +S V+SSAL+DMY + + ++ K+F+E
Sbjct: 476 GSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEM 535
Query: 228 PEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQ 287
+ V WT+IIS + + F + LF M + + PD TF ++L AC G + +
Sbjct: 536 SQKNQFV-WTSIISAYSSHGDFETVMNLFHKMIKE-NVAPDLVTFLSVLTACNRKGMVDK 593
Query: 288 GKELHAKVVGLGICGNVVVE-----------SSLLDMYGKCGKVGQAR 324
G E+ N+++E S ++DM G+ G++ +A
Sbjct: 594 GYEIF----------NMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAE 631
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/449 (37%), Positives = 261/449 (58%), Gaps = 8/449 (1%)
Query: 171 SVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEP 230
+++ A R L G +HA +I + T + + L+ YG+ + DA K+ DE PE
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPE- 115
Query: 231 EDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKE 290
++VV WTA+IS ++ EAL +F M R G P+ FTF T+L +C L GK+
Sbjct: 116 KNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG-KPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 291 LHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQ--- 347
+H +V ++ V SSLLDMY K G++ +AR +F+ L +++ VS TA+++ Y Q
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 348 NKEYEAVFELVRERGVSDLY-AFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESA 406
++E +F + G+S Y + ++L A SG+A + GK+ HC +R+ +++++
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 294
Query: 407 LVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEG-MEP 465
L+D+Y+KCG + +A+RLF +M R I+WNAM+ G +++G G EVLELF M E ++P
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 354
Query: 466 DYITFIGVLFACSHTGLVDEGRRYFALMV-DEYGIKPGVEHYNCMIDLLGRAEMIEEAES 524
D +T + VL CSH + D G F MV EYG KPG EHY C++D+LGRA I+EA
Sbjct: 355 DAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFE 414
Query: 525 LLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGR 584
++ + + LLGAC E V R++IE+EP+ +YV+L N+Y + GR
Sbjct: 415 FIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGR 474
Query: 585 WNDAMEIRKLMEDRGVKKLPGKSWIGSEN 613
W D +R +M + V K PG+SWI E
Sbjct: 475 WADVNNVRAMMMQKAVTKEPGRSWIQHEQ 503
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 188/348 (54%), Gaps = 12/348 (3%)
Query: 35 ILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSG 94
I Q C +G L++AL L P + Y +LL C + G +HAH +K+
Sbjct: 27 ISQLCSNGRLQEAL----LEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTR 82
Query: 95 IHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLF 154
++ LL Y K L A+ + D + +++++WT++IS Y++ G +L +F
Sbjct: 83 YLPATYLRTRLLIFYGKCDC-LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVF 141
Query: 155 SQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRN 214
++M+ D +PN FT ++V+T+ + L LG +H +++ + S+ + S+L+DMY +
Sbjct: 142 AEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKA 201
Query: 215 RAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGT 274
+++A ++F+ PE DVV TAII+ + + EAL +F +H G+ P+ T+ +
Sbjct: 202 GQIKEAREIFECLPE-RDVVSCTAIIAGYAQLGLDEEALEMFHRLHSE-GMSPNYVTYAS 259
Query: 275 LLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKN 334
LL A + L L GK+ H V+ + V+++SL+DMY KCG + AR +FD + ++
Sbjct: 260 LLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERT 319
Query: 335 SVSWTAMLSAYCQN---KEYEAVFELVRE--RGVSDLYAFGTVLRACS 377
++SW AML Y ++ +E +F L+R+ R D VL CS
Sbjct: 320 AISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS 367
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 91/187 (48%), Gaps = 2/187 (1%)
Query: 342 LSAYCQN-KEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRD 400
+S C N + EA+ E+ + + +L AC A+ G+ VH ++
Sbjct: 27 ISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPA 86
Query: 401 VIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIK 460
+ + L+ Y KC C++ A+++ M +N ++W AMI +Q G +E L +F +M++
Sbjct: 87 TYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMR 146
Query: 461 EGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIE 520
+P+ TF VL +C + G++ L+V ++ + + ++D+ +A I+
Sbjct: 147 SDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIV-KWNYDSHIFVGSSLLDMYAKAGQIK 205
Query: 521 EAESLLE 527
EA + E
Sbjct: 206 EAREIFE 212
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 179/582 (30%), Positives = 294/582 (50%), Gaps = 46/582 (7%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYL-KLGPHLPQAQTLFDS 125
+ S+L C T F LH+ ++ G+ + L + +LG H+ A LF
Sbjct: 37 FISILGVCKTTDQF---KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVK 93
Query: 126 LAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRD---L 182
+ D++ W ++I +++ ++L+ ML + P++ T ++ RD L
Sbjct: 94 IPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLK--RDGGAL 151
Query: 183 ALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIST 242
A G LH V+ G SN + +ALV MY + A +FD + EDV W +IS
Sbjct: 152 ACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCK-EDVFSWNLMISG 210
Query: 243 LTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICG 302
R + E++ L V M R + P T +L+AC+ + K +H V
Sbjct: 211 YNRMKEYEESIELLVEMERNL-VSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 303 NVVVESSLLDMYGKCGKVG-------------------------------QARVVFDRLG 331
++ +E++L++ Y CG++ AR FD++
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329
Query: 332 DKNSVSWTAMLSAY----CQNKEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKE 387
++ +SWT M+ Y C N+ E E+ + D + +VL AC+ + ++ +G+
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 389
Query: 388 VHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGR 447
+ + DV+V +AL+D+Y KCGC + AQ++F M+ R++ TW AM+ GLA NG+
Sbjct: 390 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 449
Query: 448 GTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYN 507
G E +++F M ++PD IT++GVL AC+H+G+VD+ R++FA M ++ I+P + HY
Sbjct: 450 GQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYG 509
Query: 508 CMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPD 567
CM+D+LGRA +++EA +L + +W LLGA +D AE A+K++ELEPD
Sbjct: 510 CMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPD 569
Query: 568 FHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
Y LL NIY RW D E+R+ + D +KK PG S I
Sbjct: 570 NGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLI 611
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 296 bits (757), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 181/549 (32%), Positives = 296/549 (53%), Gaps = 15/549 (2%)
Query: 70 LLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL-AV 128
LL+ ++ SS + + + D + N ++T K + + S+ +V
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSV 68
Query: 129 RDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACL 188
++ +L+S+Y +P ++ + + P+ FT V A K + G +
Sbjct: 69 LSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQI 128
Query: 189 HAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDM 248
H +V GF+ + + ++LV YG R+A K+F E P DVV WT II+ TR +
Sbjct: 129 HGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMP-VRDVVSWTGIITGFTRTGL 187
Query: 249 FREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVES 308
++EAL F M + P+ T+ +L + +G L GK +H ++ ++ +
Sbjct: 188 YKEALDTFSKMD----VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGN 243
Query: 309 SLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSA--YCQ-NKEYEAVFELVR-ERGVS 364
+L+DMY KC ++ A VF L K+ VSW +M+S +C+ +KE +F L++ G+
Sbjct: 244 ALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIK 303
Query: 365 -DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR-DVIVESALVDLYAKCGCVDFAQR 422
D + +VL AC+ + AV G+ VH +Y+ G + D + +A+VD+YAKCG ++ A
Sbjct: 304 PDGHILTSVLSACASLGAVDHGRWVH-EYILTAGIKWDTHIGTAIVDMYAKCGYIETALE 362
Query: 423 LFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGL 482
+F + +N TWNA++GGLA +G G E L FE+M+K G +P+ +TF+ L AC HTGL
Sbjct: 363 IFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGL 422
Query: 483 VDEGRRYFALMVD-EYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVL 541
VDEGRRYF M EY + P +EHY CMIDLL RA +++EA L++ + D + +
Sbjct: 423 VDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAI 482
Query: 542 LGACTKCSDYVT-AERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGV 600
L AC + + + +++E + YVLL NI+ A RW+D IR+LM+ +G+
Sbjct: 483 LSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGI 542
Query: 601 KKLPGKSWI 609
K+PG S+I
Sbjct: 543 SKVPGSSYI 551
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 203/408 (49%), Gaps = 26/408 (6%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
+ + + C K S G +H K G + D +V NSL+ Y G A +F +
Sbjct: 109 FPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGES-RNACKVFGEM 167
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
VRD+++WT +I+ +TR G +L FS+M D+EPN T V+ ++ ++ L+LG
Sbjct: 168 PVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGK 224
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
+H +++ R + +AL+DMY + + DA+++F E E +D V W ++IS L
Sbjct: 225 GIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGE-LEKKDKVSWNSMISGLVHC 283
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
+ +EA+ LF M G+ PDG ++L+ACA+LG + G+ +H ++ GI + +
Sbjct: 284 ERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHI 343
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAM---LSAYCQNKEYEAVFELVRERGV 363
++++DMY KCG + A +F+ + KN +W A+ L+ + E FE + + G
Sbjct: 344 GTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGF 403
Query: 364 S-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESAL------VDLYAKCGC 416
+L F L AC V G+ +Y K R+ + L +DL + G
Sbjct: 404 KPNLVTFLAALNACCHTGLVDEGR----RYFHKMKSREYNLFPKLEHYGCMIDLLCRAGL 459
Query: 417 VDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGT------EVLELFEDM 458
+D A L +M V+ + I +N RGT E+L+ F D+
Sbjct: 460 LDEALELVKAMPVKPDVRICGAILSACKN-RGTLMELPKEILDSFLDI 506
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 113/254 (44%), Gaps = 41/254 (16%)
Query: 36 LQHCKDGSLRQALHLLNTSQTTLDPNLKP--VLYASLLQTCTKTSSFLHGTTLHAHALKS 93
L HC+ ++A+ L + QT+ +KP + S+L C + HG +H + L +
Sbjct: 280 LVHCERS--KEAIDLFSLMQTS--SGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTA 335
Query: 94 GIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQL 153
GI D +G +++ +Y K G ++ A +F+ + +++ W +L+ G + SL+
Sbjct: 336 GIKWDTHIGTAIVDMYAKCG-YIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRY 394
Query: 154 FSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGR 213
F +M+ L +PN T + AL AC H + LVD GR
Sbjct: 395 FEEMVKLGFKPNLVTFLA-----------ALNACCH---------------TGLVDE-GR 427
Query: 214 NRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFG 273
+ + ++ P+ E + +I L R + EAL L AM + PD G
Sbjct: 428 RYFHKMKSREYNLFPKLEH---YGCMIDLLCRAGLLDEALELVKAM----PVKPDVRICG 480
Query: 274 TLLAACANLGWLRQ 287
+L+AC N G L +
Sbjct: 481 AILSACKNRGTLME 494
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 296 bits (757), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 177/553 (32%), Positives = 288/553 (52%), Gaps = 11/553 (1%)
Query: 70 LLQTCTKTSSFLHGTTLHAHAL---KSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
LL+ C +S G ++HAH + +S D + NSL+ LY+K + +A+ LFD +
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETV-RARKLFDLM 95
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQML-DLDMEPNAFTISSVITAASKLRDLALG 185
R++++W +++ Y +G L+LF M + PN F + V + S + G
Sbjct: 96 PERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEG 155
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTR 245
H + G S+ + + LV MY +A+++ D+ P D+ +++ +S
Sbjct: 156 KQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYC-DLSVFSSALSGYLE 214
Query: 246 NDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV 305
F+E L + V + T+ + L +NL L ++H+++V G V
Sbjct: 215 CGAFKEGLDVLRKTANE-DFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVE 273
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSD 365
+L++MYGKCGKV A+ VFD +N T ++ AY Q+K +E L + +
Sbjct: 274 ACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE 333
Query: 366 L----YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
+ Y F +L + + ++ + G +H ++ G V+V +ALV++YAK G ++ A+
Sbjct: 334 VPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDAR 393
Query: 422 RLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG 481
+ F M R+ +TWN MI G + +G G E LE F+ MI G P+ ITFIGVL ACSH G
Sbjct: 394 KAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIG 453
Query: 482 LVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVL 541
V++G YF ++ ++ ++P ++HY C++ LL +A M ++AE + A +D W L
Sbjct: 454 FVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTL 513
Query: 542 LGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
L AC +Y ++VA IE P+ YVLL NI+ W ++R LM +RGVK
Sbjct: 514 LNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVK 573
Query: 602 KLPGKSWIGSENQ 614
K PG SWIG NQ
Sbjct: 574 KEPGVSWIGIRNQ 586
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 109/262 (41%), Gaps = 43/262 (16%)
Query: 40 KDGSLRQALHLLNTSQTT-LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSD 98
+D S +AL+L + T + PN +A LL + + S G LH LKSG +
Sbjct: 315 QDKSFEEALNLFSKMDTKEVPPN--EYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNH 372
Query: 99 RFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQML 158
VGN+L+ +Y K G + A+ F + RDI+ W ++IS + G +L+ F +M+
Sbjct: 373 VMVGNALVNMYAKSGS-IEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMI 431
Query: 159 DLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVR 218
PN T V L AC H + +G H
Sbjct: 432 FTGEIPNRITFIGV-----------LQACSHIGFVEQGLH-----------------YFN 463
Query: 219 DALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAA 278
+K FD P D+ +T I+ L++ MF++A R + D + TLL A
Sbjct: 464 QLMKKFDVQP---DIQHYTCIVGLLSKAGMFKDAEDFM----RTAPIEWDVVAWRTLLNA 516
Query: 279 CANLGWLRQGKELHAKVVGLGI 300
C ++R+ L KV I
Sbjct: 517 C----YVRRNYRLGKKVAEYAI 534
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 171/541 (31%), Positives = 286/541 (52%), Gaps = 10/541 (1%)
Query: 86 LHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAG 145
+HAH +KS SD FVG + + +++K + A +F+ + RD W +++S + ++G
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNS-VDYAAKVFERMPERDATTWNAMLSGFCQSG 132
Query: 146 RPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISS 205
+ LF +M ++ P++ T+ ++I +AS + L L +HA+ I G +++
Sbjct: 133 HTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVAN 192
Query: 206 ALVDMYGRNRAVRDALKLFDESPEPED--VVGWTAIISTLTRNDMFREALRLFVAMHRGC 263
+ YG+ + D+ KL E+ + D VV W ++ + +A L+ M R
Sbjct: 193 TWISTYGKCGDL-DSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE- 250
Query: 264 GLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQA 323
PD TF L A+C N L QG+ +H+ + LG ++ ++ + MY K A
Sbjct: 251 EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSA 310
Query: 324 RVVFDRLGDKNSVSWTAMLSAYCQNKEYE---AVFE-LVRERGVSDLYAFGTVLRACSGV 379
R++FD + + VSWT M+S Y + + + A+F +++ DL +++ C
Sbjct: 311 RLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKF 370
Query: 380 AAVMLGKEVHCQYVRKGGWRD-VIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAM 438
++ GK + + G RD V++ +AL+D+Y+KCG + A+ +F + + +TW M
Sbjct: 371 GSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTM 430
Query: 439 IGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYG 498
I G A NG E L+LF MI +P++ITF+ VL AC+H+G +++G YF +M Y
Sbjct: 431 IAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYN 490
Query: 499 IKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVA 558
I PG++HY+CM+DLLGR +EEA L+ N + D +W LL AC + AE+ A
Sbjct: 491 ISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAA 550
Query: 559 RKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQKGSL 618
+ LEP YV + NIY A G W+ IR +M+ R +KK PG+S I + S
Sbjct: 551 ESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSF 610
Query: 619 S 619
+
Sbjct: 611 T 611
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 215/450 (47%), Gaps = 14/450 (3%)
Query: 133 AWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMV 192
AW I P+ SL LF +M EPN FT V A ++L D+ +HA +
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 193 ISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREA 252
I F S+ + +A VDM+ + +V A K+F+ PE D W A++S ++ +A
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPE-RDATTWNAMLSGFCQSGHTDKA 137
Query: 253 LRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLD 312
LF M R + PD T TL+ + + L+ + +HA + LG+ V V ++ +
Sbjct: 138 FSLFREM-RLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWIS 196
Query: 313 MYGKCGKVGQARVVFDRL--GDKNSVSWTAMLSAYCQNKEYEAVFEL----VRERGVSDL 366
YGKCG + A++VF+ + GD+ VSW +M AY E F L +RE DL
Sbjct: 197 TYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDL 256
Query: 367 YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLS 426
F + +C + G+ +H + G +D+ + + +Y+K A+ LF
Sbjct: 257 STFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDI 316
Query: 427 MEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEG 486
M R ++W MI G A+ G E L LF MIK G +PD +T + ++ C G ++ G
Sbjct: 317 MTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG 376
Query: 487 RRYFALMVDEYGIK-PGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGAC 545
++ D YG K V N +ID+ + I EA + +N + + W ++
Sbjct: 377 -KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVT-WTTMIAGY 434
Query: 546 TKCSDYVTAERVARKMIELE--PDFHLSYV 573
++ A ++ KMI+L+ P+ H++++
Sbjct: 435 ALNGIFLEALKLFSKMIDLDYKPN-HITFL 463
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 173/369 (46%), Gaps = 17/369 (4%)
Query: 233 VVGWT-AIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKEL 291
V W I + RND E+L LF M RG G P+ FTF + ACA L + + +
Sbjct: 17 VNAWNLQIREAVNRNDPV-ESLLLFREMKRG-GFEPNNFTFPFVAKACARLADVGCCEMV 74
Query: 292 HAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEY 351
HA ++ +V V ++ +DM+ KC V A VF+R+ ++++ +W AMLS +CQ+
Sbjct: 75 HAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 352 EAVFELVRERGVS----DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESAL 407
+ F L RE ++ D T++++ S ++ L + +H +R G V V +
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTW 194
Query: 408 VDLYAKCGCVDFAQRLFLSMEV--RNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEP 465
+ Y KCG +D A+ +F +++ R ++WN+M + G + L+ M++E +P
Sbjct: 195 ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP 254
Query: 466 DYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESL 525
D TFI + +C + + +GR + + G +E N I + ++E A L
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAI-HLGTDQDIEAINTFISMYSKSEDTCSARLL 313
Query: 526 LENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIEL--EPDFHLSYVLLGNIYR--- 580
+ R S W V++ + D A + MI+ +PD L+ +
Sbjct: 314 FDIMTSRTCVS-WTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGS 372
Query: 581 -AVGRWNDA 588
G+W DA
Sbjct: 373 LETGKWIDA 381
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 171/369 (46%), Gaps = 15/369 (4%)
Query: 28 ASSTDSEILQHCKDGSLRQALHLLNTSQ-TTLDPNLKPVLYASLLQTCTKTSSFLHGTTL 86
A++ ++ + C+ G +A L + + P+ V+ +L+Q+ + S +
Sbjct: 118 ATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVM--TLIQSASFEKSLKLLEAM 175
Query: 87 HAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL--AVRDIIAWTSLISAYTRA 144
HA ++ G+ V N+ ++ Y K G L A+ +F+++ R +++W S+ AY+
Sbjct: 176 HAVGIRLGVDVQVTVANTWISTYGKCGD-LDSAKLVFEAIDRGDRTVVSWNSMFKAYSVF 234
Query: 145 GRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVIS 204
G ++ L+ ML + +P+ T ++ + L G +H+ I G +
Sbjct: 235 GEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAI 294
Query: 205 SALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCG 264
+ + MY ++ A LFD V WT +IS EAL LF AM + G
Sbjct: 295 NTFISMYSKSEDTCSARLLFDIMTS-RTCVSWTVMISGYAEKGDMDEALALFHAMIKS-G 352
Query: 265 LVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGIC--GNVVVESSLLDMYGKCGKVGQ 322
PD T +L++ C G L GK + A+ G C NV++ ++L+DMY KCG + +
Sbjct: 353 EKPDLVTLLSLISGCGKFGSLETGKWIDARADIYG-CKRDNVMICNALIDMYSKCGSIHE 411
Query: 323 ARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDL----YAFGTVLRACSG 378
AR +FD +K V+WT M++ Y N + +L + D F VL+AC+
Sbjct: 412 ARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAH 471
Query: 379 VAAVMLGKE 387
++ G E
Sbjct: 472 SGSLEKGWE 480
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 141/292 (48%), Gaps = 8/292 (2%)
Query: 58 LDPNLKPVL--YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPH 115
L KP L + +L +C + G +H+HA+ G D N+ +++Y K
Sbjct: 248 LREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSK-SED 306
Query: 116 LPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITA 175
A+ LFD + R ++WT +IS Y G +L LF M+ +P+ T+ S+I+
Sbjct: 307 TCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISG 366
Query: 176 ASKLRDLALGACLHAMVISRGF-HSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVV 234
K L G + A G N +I +AL+DMY + ++ +A +FD +PE + VV
Sbjct: 367 CGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPE-KTVV 425
Query: 235 GWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKE-LHA 293
WT +I+ N +F EAL+LF M P+ TF +L ACA+ G L +G E H
Sbjct: 426 TWTTMIAGYALNGIFLEALKLFSKM-IDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHI 484
Query: 294 KVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVS-WTAMLSA 344
I + S ++D+ G+ GK+ +A + + K W A+L+A
Sbjct: 485 MKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNA 536
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 182/588 (30%), Positives = 301/588 (51%), Gaps = 49/588 (8%)
Query: 30 STDSEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYA--SLLQTCTKTSSFLHGTTLH 87
S ++ I +CK GS +A +L Q+ +KP Y S+L+ CT L G +H
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEMQS---DGIKPNEYTLGSVLRMCTSLVLLLRGEQIH 148
Query: 88 AHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL-AVRDIIAWTSLISAYTRAGR 146
H +K+G D V N LL +Y + + +A+ LF+++ ++ + WTS+++ Y++ G
Sbjct: 149 GHTIKTGFDLDVNVVNGLLAMYAQC-KRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGF 207
Query: 147 PINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSA 206
+++ F + + N +T SV+TA + + +G +H ++ GF +N + SA
Sbjct: 208 AFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSA 267
Query: 207 LVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLV 266
L+DMY + R + A L E E +DVV W ++I R + EAL +F MH +
Sbjct: 268 LIDMYAKCREMESARALL-EGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHER-DMK 325
Query: 267 PDGFTFGTLLAACA-NLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARV 325
D FT ++L A + ++ H +V G +V ++L+DMY K G + A
Sbjct: 326 IDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALK 385
Query: 326 VFDRLGDKNSVSWTAMLSAYCQNKEYEAVFEL---VRERGVS-DLYAFGTVLRACSGVAA 381
VF+ + +K+ +SWTA+++ N Y+ +L +R G++ D +VL A + +
Sbjct: 386 VFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTL 445
Query: 382 VMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGG 441
+ G++VH Y++ G + V ++LV +Y KCG ++ A +F SME+R+ ITW +I G
Sbjct: 446 LEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVG 505
Query: 442 LAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKP 501
A+N GL+++ +RYF M YGI P
Sbjct: 506 YAKN-----------------------------------GLLEDAQRYFDSMRTVYGITP 530
Query: 502 GVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKM 561
G EHY CMIDL GR+ + E LL + D ++W +L A K + ER A+ +
Sbjct: 531 GPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTL 590
Query: 562 IELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
+ELEP+ + YV L N+Y A GR ++A +R+LM+ R + K PG SW+
Sbjct: 591 MELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWV 638
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 191/377 (50%), Gaps = 37/377 (9%)
Query: 184 LGACLHAMVISRGFHSNTVIS--------------------------SALVDMYGRNRAV 217
G+C+H+ HSN ++ + ++ Y +R +
Sbjct: 16 FGSCIHSYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRL 75
Query: 218 RDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLA 277
DA KLF +P ++ + W A+IS ++ EA LF M G+ P+ +T G++L
Sbjct: 76 SDAEKLFRSNP-VKNTISWNALISGYCKSGSKVEAFNLFWEMQSD-GIKPNEYTLGSVLR 133
Query: 278 ACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRL-GDKNSV 336
C +L L +G+++H + G +V V + LL MY +C ++ +A +F+ + G+KN+V
Sbjct: 134 MCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNV 193
Query: 337 SWTAMLSAYCQN----KEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQY 392
+WT+ML+ Y QN K E +L RE S+ Y F +VL AC+ V+A +G +VHC
Sbjct: 194 TWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCI 253
Query: 393 VRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVL 452
V+ G ++ V+SAL+D+YAKC ++ A+ L MEV + ++WN+MI G + G E L
Sbjct: 254 VKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEAL 313
Query: 453 ELFEDMIKEGMEPDYITFIGVL--FACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMI 510
+F M + M+ D T +L FA S T + + ++ Y V N ++
Sbjct: 314 SMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVN--NALV 371
Query: 511 DLLGRAEMIEEAESLLE 527
D+ + +++ A + E
Sbjct: 372 DMYAKRGIMDSALKVFE 388
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 177/547 (32%), Positives = 295/547 (53%), Gaps = 13/547 (2%)
Query: 69 SLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTL--FDSL 126
S++ C + S + +HA KSG + D V +L+++Y K G Q D +
Sbjct: 356 SVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDI 415
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
++I+ +I++++++ +P +++LF++ML + + F++ S++ S L L LG
Sbjct: 416 QRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGK 470
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
+H + G + + S+L +Y + ++ ++ KLF P +D W ++IS
Sbjct: 471 QVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPF-KDNACWASMISGFNEY 529
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
REA+ LF M G PD T +L C++ L +GKE+H + GI + +
Sbjct: 530 GYLREAIGLFSEMLDD-GTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDL 588
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVS-- 364
S+L++MY KCG + AR V+DRL + + VS ++++S Y Q+ + F L R+ +S
Sbjct: 589 GSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGF 648
Query: 365 --DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQR 422
D +A ++L+A + LG +VH + G + V S+L+ +Y+K G +D +
Sbjct: 649 TMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCK 708
Query: 423 LFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGL 482
F + + I W A+I AQ+G+ E L+++ M ++G +PD +TF+GVL ACSH GL
Sbjct: 709 AFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGL 768
Query: 483 VDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLL 542
V+E + MV +YGI+P HY CM+D LGR+ + EAES + N + D +W LL
Sbjct: 769 VEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLL 828
Query: 543 GACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKK 602
AC + + A+K IELEP +Y+ L NI VG W++ E RKLM+ GV+K
Sbjct: 829 AACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQK 888
Query: 603 LPGKSWI 609
PG S +
Sbjct: 889 EPGWSSV 895
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 208/395 (52%), Gaps = 10/395 (2%)
Query: 86 LHAHALKSGIHS-DRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRA 144
L AH L+ + D F+ SLL+ Y G + A LFD++ D+++ +IS Y +
Sbjct: 70 LQAHLLRRYLLPFDVFLTKSLLSWYSNSGS-MADAAKLFDTIPQPDVVSCNIMISGYKQH 128
Query: 145 GRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVIS 204
SL+ FS+M L E N + SVI+A S L+ + I G+ V+
Sbjct: 129 RLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVE 188
Query: 205 SALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCG 264
SAL+D++ +N DA K+F +S +V W II+ RN + LF M G
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSA-NVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQ 247
Query: 265 LVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQAR 324
PD +T+ ++LAACA+L LR GK + A+V+ G +V V ++++D+Y KCG + +A
Sbjct: 248 -KPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAM 305
Query: 325 VVFDRLGDKNSVSWTAMLSAYCQ-NKEYEA--VFELVRERGVS-DLYAFGTVLRACSGVA 380
VF R+ + + VSWT MLS Y + N + A +F+ +R GV + +V+ AC +
Sbjct: 306 EVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPS 365
Query: 381 AVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSM-EVRNQITWNAMI 439
V +VH + G + D V +AL+ +Y+K G +D ++++F + +++ Q N MI
Sbjct: 366 MVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMI 425
Query: 440 GGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVL 474
+Q+ + + + LF M++EG+ D + +L
Sbjct: 426 TSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL 460
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/540 (24%), Positives = 262/540 (48%), Gaps = 48/540 (8%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
Y+S+L C G + A +K G D FV +++ LY K G H+ +A +F +
Sbjct: 254 YSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCG-HMAEAMEVFSRI 311
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
+++WT ++S YT++ ++L++F +M +E N T++SVI+A + + +
Sbjct: 312 PNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEAS 371
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
+HA V GF+ ++ +++AL+ MY ++ + + ++F++ + + +I++ +++
Sbjct: 372 QVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQS 431
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
+A+RLF M + GL D F+ +LL+ L L GK++H + G+ ++ V
Sbjct: 432 KKPGKAIRLFTRMLQE-GLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTV 487
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRERGV 363
SSL +Y KCG + ++ +F + K++ W +M+S + + +E +F + + G
Sbjct: 488 GSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGT 547
Query: 364 S-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQR 422
S D VL CS ++ GKE+H +R G + + + SALV++Y+KCG + A++
Sbjct: 548 SPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQ 607
Query: 423 LFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGL 482
++ + + ++ +++I G +Q+G + LF DM+ G D +L A
Sbjct: 608 VYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA------ 661
Query: 483 VDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLL 542
A + DE + V Y I L + SLL
Sbjct: 662 --------AALSDESSLGAQVHAYITKIGLCTEPSV---GSSLL---------------- 694
Query: 543 GACTKCSDYVTAERVARKMIELE-PDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
T S + + + + ++ PD +++ L Y G+ N+A+++ LM+++G K
Sbjct: 695 ---TMYSKFGSIDDCCKAFSQINGPDL-IAWTALIASYAQHGKANEALQVYNLMKEKGFK 750
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 193/392 (49%), Gaps = 9/392 (2%)
Query: 177 SKLRDLALGACLHAMVISRGFHS-NTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVG 235
S+L +L L A ++ R + ++ +L+ Y + ++ DA KLFD P+P DVV
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQP-DVVS 117
Query: 236 WTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV 295
+IS ++ +F E+LR F MH G + ++G++++AC+ L + +
Sbjct: 118 CNIMISGYKQHRLFEESLRFFSKMHF-LGFEANEISYGSVISACSALQAPLFSELVCCHT 176
Query: 296 VGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVF 355
+ +G VVES+L+D++ K + A VF N W +++ +N+ Y AVF
Sbjct: 177 IKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVF 236
Query: 356 ELVRERGV----SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLY 411
+L E V D Y + +VL AC+ + + GK V + + K G DV V +A+VDLY
Sbjct: 237 DLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVI-KCGAEDVFVCTAIVDLY 295
Query: 412 AKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFI 471
AKCG + A +F + + ++W M+ G ++ LE+F++M G+E + T
Sbjct: 296 AKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVT 355
Query: 472 GVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADC 531
V+ AC +V E + A V + G +I + ++ I+ +E + E+ D
Sbjct: 356 SVISACGRPSMVCEASQVHA-WVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDD 414
Query: 532 RYDHSLWAVLLGACTKCSDYVTAERVARKMIE 563
++ V++ + ++ A R+ +M++
Sbjct: 415 IQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQ 446
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 181/604 (29%), Positives = 295/604 (48%), Gaps = 75/604 (12%)
Query: 84 TTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTR 143
T HA LKSG +D ++ L+ Y A + S+ I +++SLI A T+
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNC-FNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 144 AGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVI 203
A S+ +FS+M + P++ + ++ ++L +G +H + G + +
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 204 SSALVDMYGRNRAVRDALKLFDESPEPE-------------------------------- 231
++ MY R + DA K+FD + +
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 232 --DVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGK 289
++V W I+S R+ +EA+ +F +H G PD T ++L + + L G+
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHH-LGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 290 ELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDR-------------------- 329
+H V+ G+ + V S+++DMYGK G V +F++
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 330 LGDK---------------NSVSWTAMLSAYCQNKEYEAVFELVRERGVSDL----YAFG 370
L DK N VSWT++++ QN + EL RE V+ +
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 371 TVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR 430
++L AC +AA+ G+ H VR +V V SAL+D+YAKCG ++ +Q +F M +
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 431 NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYF 490
N + WN+++ G + +G+ EV+ +FE +++ ++PD+I+F +L AC GL DEG +YF
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 491 ALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSD 550
+M +EYGIKP +EHY+CM++LLGRA ++EA L++ D +W LL +C ++
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNN 572
Query: 551 YVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIG 610
AE A K+ LEP+ +YVLL NIY A G W + IR ME G+KK PG SWI
Sbjct: 573 VDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQ 632
Query: 611 SENQ 614
+N+
Sbjct: 633 VKNR 636
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 200/446 (44%), Gaps = 77/446 (17%)
Query: 69 SLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAV 128
+L + C + S+F G +H + SG+ D FV S+ +Y++ G + A+ +FD ++
Sbjct: 121 NLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCG-RMGDARKVFDRMSD 179
Query: 129 RD-----------------------------------IIAWTSLISAYTRAGRPINSLQL 153
+D I++W ++S + R+G ++ +
Sbjct: 180 KDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVM 239
Query: 154 FSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYG- 212
F ++ L P+ T+SSV+ + L +G +H VI +G + + SA++DMYG
Sbjct: 240 FQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGK 299
Query: 213 ------------------------------RNRAVRDALKLFD---ESPEPEDVVGWTAI 239
RN V AL++F+ E +VV WT+I
Sbjct: 300 SGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSI 359
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG 299
I+ +N EAL LF M G+ P+ T ++L AC N+ L G+ H V +
Sbjct: 360 IAGCAQNGKDIEALELFREMQVA-GVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH 418
Query: 300 ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFE 356
+ NV V S+L+DMY KCG++ +++VF+ + KN V W ++++ + + KE ++FE
Sbjct: 419 LLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFE 478
Query: 357 -LVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVE-SALVDLYAKC 414
L+R R D +F ++L AC V G + + G + + S +V+L +
Sbjct: 479 SLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRA 538
Query: 415 GCVDFAQRLFLSMEVR-NQITWNAMI 439
G + A L M + W A++
Sbjct: 539 GKLQEAYDLIKEMPFEPDSCVWGALL 564
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 104/213 (48%), Gaps = 6/213 (2%)
Query: 33 SEILQHC-KDGSLRQALHLLNTSQTT-LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHA 90
+ I+ C ++G +AL L Q + PN V S+L C ++ HG + H A
Sbjct: 357 TSIIAGCAQNGKDIEALELFREMQVAGVKPN--HVTIPSMLPACGNIAALGHGRSTHGFA 414
Query: 91 LKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINS 150
++ + + VG++L+ +Y K G + +Q +F+ + ++++ W SL++ ++ G+
Sbjct: 415 VRVHLLDNVHVGSALIDMYAKCG-RINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEV 473
Query: 151 LQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISR-GFHSNTVISSALVD 209
+ +F ++ ++P+ + +S+++A ++ G M+ G S +V+
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVN 533
Query: 210 MYGRNRAVRDALKLFDESPEPEDVVGWTAIIST 242
+ GR +++A L E P D W A++++
Sbjct: 534 LLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNS 566
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 291 bits (746), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 165/438 (37%), Positives = 250/438 (57%), Gaps = 7/438 (1%)
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTR 245
AC H +I + + + L++ Y + V A ++FD E +V W +I TR
Sbjct: 82 AC-HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLE-RSLVSWNTMIGLYTR 139
Query: 246 NDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV 305
N M EAL +F+ M R G FT ++L+AC + K+LH V I N+
Sbjct: 140 NRMESEALDIFLEM-RNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLY 198
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSD 365
V ++LLD+Y KCG + A VF+ + DK+SV+W++M++ Y QNK YE L R
Sbjct: 199 VGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMS 258
Query: 366 L----YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
L + +V+ ACS +AA++ GK++H + G +V V S+ VD+YAKCG + +
Sbjct: 259 LEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESY 318
Query: 422 RLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG 481
+F ++ +N WN +I G A++ R EV+ LFE M ++GM P+ +TF +L C HTG
Sbjct: 319 IIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTG 378
Query: 482 LVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVL 541
LV+EGRR+F LM YG+ P V HY+CM+D+LGRA ++ EA L+++ S+W L
Sbjct: 379 LVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSL 438
Query: 542 LGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
L +C + AE A K+ ELEP+ ++VLL NIY A +W + + RKL+ D VK
Sbjct: 439 LASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVK 498
Query: 602 KLPGKSWIGSENQKGSLS 619
K+ GKSWI +++ + S
Sbjct: 499 KVRGKSWIDIKDKVHTFS 516
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 188/368 (51%), Gaps = 10/368 (2%)
Query: 66 LYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDS 125
L +LQ C + + + H ++ + D + N L+ Y K G + A+ +FD
Sbjct: 63 LVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCG-FVELARQVFDG 121
Query: 126 LAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALG 185
+ R +++W ++I YTR +L +F +M + + + FTISSV++A D
Sbjct: 122 MLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC 181
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTR 245
LH + + N + +AL+D+Y + ++DA+++F ES + + V W+++++ +
Sbjct: 182 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVF-ESMQDKSSVTWSSMVAGYVQ 240
Query: 246 NDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV 305
N + EAL L+ R L + FT +++ AC+NL L +GK++HA + G NV
Sbjct: 241 NKNYEEALLLYRRAQR-MSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVF 299
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRERG 362
V SS +DMY KCG + ++ ++F + +KN W ++S + ++ KE +FE +++ G
Sbjct: 300 VASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDG 359
Query: 363 V-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRK--GGWRDVIVESALVDLYAKCGCVDF 419
+ + F ++L C V G+ + +R G +V+ S +VD+ + G +
Sbjct: 360 MHPNEVTFSSLLSVCGHTGLVEEGRRFF-KLMRTTYGLSPNVVHYSCMVDILGRAGLLSE 418
Query: 420 AQRLFLSM 427
A L S+
Sbjct: 419 AYELIKSI 426
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 175/349 (50%), Gaps = 21/349 (6%)
Query: 68 ASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLA 127
+S+L C L LH ++K+ I + +VG +LL LY K G + A +F+S+
Sbjct: 166 SSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCG-MIKDAVQVFESMQ 224
Query: 128 VRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGAC 187
+ + W+S+++ Y + +L L+ + + +E N FT+SSVI A S L L G
Sbjct: 225 DKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ 284
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRND 247
+HA++ GF SN ++S+ VDMY + ++R++ +F E E +++ W IIS ++
Sbjct: 285 MHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQE-KNLELWNTIISGFAKHA 343
Query: 248 MFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV-VGLGICGNVVV 306
+E + LF M + G+ P+ TF +LL+ C + G + +G+ + G+ NVV
Sbjct: 344 RPKEVMILFEKMQQD-GMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVH 402
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLG-DKNSVSWTAMLSAYC---QNKEY-----EAVFEL 357
S ++D+ G+ G + +A + + D + W ++L A C +N E E +FEL
Sbjct: 403 YSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL-ASCRVYKNLELAEVAAEKLFEL 461
Query: 358 VRERG-----VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDV 401
E +S++YA + ++ ++ + VR W D+
Sbjct: 462 EPENAGNHVLLSNIYAANKQWEEIAKSRKLL--RDCDVKKVRGKSWIDI 508
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 5/206 (2%)
Query: 372 VLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRN 431
+L+ C+ AVM K H + +R DV + + L++ Y+KCG V+ A+++F M R+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 432 QITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFA 491
++WN MIG +N +E L++F +M EG + T VL AC E ++
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 492 LMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDY 551
L V + I + ++DL + MI++A + E+ + + W+ ++ + +Y
Sbjct: 187 LSV-KTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVT-WSSMVAGYVQNKNY 244
Query: 552 VTA---ERVARKMIELEPDFHLSYVL 574
A R A++M + F LS V+
Sbjct: 245 EEALLLYRRAQRMSLEQNQFTLSSVI 270
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 291 bits (746), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 179/595 (30%), Positives = 305/595 (51%), Gaps = 43/595 (7%)
Query: 66 LYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDS 125
L +L++ T+ S LHA +++ S S++ L +A LF +
Sbjct: 7 LIKTLIKNPTRIKSKSQAKQLHAQFIRT--QSLSHTSASIVISIYTNLKLLHEALLLFKT 64
Query: 126 LAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALG 185
L ++AW S+I +T +L F +M P+ SV+ + + + DL G
Sbjct: 65 LKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFG 124
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDAL---KLFDESPEP------------ 230
+H ++ G + +AL++MY + + + +FDE P+
Sbjct: 125 ESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAE 184
Query: 231 --------------------EDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGF 270
+DVV + II+ ++ M+ +ALR+ M L PD F
Sbjct: 185 TCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGT-TDLKPDSF 243
Query: 271 TFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRL 330
T ++L + + +GKE+H V+ GI +V + SSL+DMY K ++ + VF RL
Sbjct: 244 TLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL 303
Query: 331 GDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDL----YAFGTVLRACSGVAAVMLGK 386
++ +SW ++++ Y QN Y L R+ + + AF +V+ AC+ +A + LGK
Sbjct: 304 YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGK 363
Query: 387 EVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNG 446
++H +R G ++ + SALVD+Y+KCG + A+++F M V ++++W A+I G A +G
Sbjct: 364 QLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHG 423
Query: 447 RGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHY 506
G E + LFE+M ++G++P+ + F+ VL ACSH GLVDE YF M YG+ +EHY
Sbjct: 424 HGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHY 483
Query: 507 NCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEP 566
+ DLLGRA +EEA + + S+W+ LL +C+ + AE+VA K+ ++
Sbjct: 484 AAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDS 543
Query: 567 DFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQ-KGSLSG 620
+ +YVL+ N+Y + GRW + ++R M +G++K P SWI +N+ G +SG
Sbjct: 544 ENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSG 598
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 201/422 (47%), Gaps = 44/422 (10%)
Query: 162 MEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDAL 221
M + I ++I ++++ + LHA I S+T +S ++ +Y + + +AL
Sbjct: 1 MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEAL 59
Query: 222 KLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACAN 281
LF P V+ W ++I T +F +AL FV M R G PD F ++L +C
Sbjct: 60 LLFKTLKSPP-VLAWKSVIRCFTDQSLFSKALASFVEM-RASGRCPDHNVFPSVLKSCTM 117
Query: 282 LGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVG-------------------- 321
+ LR G+ +H +V LG+ ++ ++L++MY K +G
Sbjct: 118 MMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSG 177
Query: 322 ----------------QARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSD 365
R VF+ + K+ VS+ +++ Y Q+ YE +VRE G +D
Sbjct: 178 DEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD 237
Query: 366 L----YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
L + +VL S V+ GKE+H +RKG DV + S+LVD+YAK ++ ++
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 297
Query: 422 RLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG 481
R+F + R+ I+WN+++ G QNGR E L LF M+ ++P + F V+ AC+H
Sbjct: 298 RVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA 357
Query: 482 LVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVL 541
+ G++ ++ G + + ++D+ + I+ A + + + + S A++
Sbjct: 358 TLHLGKQLHGYVL-RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAII 416
Query: 542 LG 543
+G
Sbjct: 417 MG 418
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 184/360 (51%), Gaps = 18/360 (5%)
Query: 30 STDSEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLY--ASLLQTCTKTSSFLHGTTLH 87
S ++ I + + G AL ++ TT +LKP + +S+L ++ + G +H
Sbjct: 209 SYNTIIAGYAQSGMYEDALRMVREMGTT---DLKPDSFTLSSVLPIFSEYVDVIKGKEIH 265
Query: 88 AHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRP 147
+ ++ GI SD ++G+SL+ +Y K + ++ +F L RD I+W SL++ Y + GR
Sbjct: 266 GYVIRKGIDSDVYIGSSLVDMYAK-SARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRY 324
Query: 148 INSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSAL 207
+L+LF QM+ ++P A SSVI A + L L LG LH V+ GF SN I+SAL
Sbjct: 325 NEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASAL 384
Query: 208 VDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVP 267
VDMY + ++ A K+FD D V WTAII + EA+ LF M R G+ P
Sbjct: 385 VDMYSKCGNIKAARKIFDRM-NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ-GVKP 442
Query: 268 DGFTFGTLLAACANLGWLRQG---KELHAKVVGLGICGNVVVE--SSLLDMYGKCGKVGQ 322
+ F +L AC+++G + + KV GL N +E +++ D+ G+ GK+ +
Sbjct: 443 NQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGL----NQELEHYAAVADLLGRAGKLEE 498
Query: 323 ARVVFDRLGDKNSVS-WTAMLSAYCQNKEYEAVFELVRERGVSDLYAFGTVLRACSGVAA 381
A ++ + + S W+ +LS+ +K E ++ + D G + C+ A+
Sbjct: 499 AYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYAS 558
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 177/539 (32%), Positives = 288/539 (53%), Gaps = 11/539 (2%)
Query: 82 HGTTLHAHALKSGIHSDRFVGNSLL--TLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLIS 139
H +H + +H D F+ N LL TL+ + + + LF +I + SLI+
Sbjct: 28 HLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKY---SYLLFSHTQFPNIFLYNSLIN 84
Query: 140 AYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHS 199
+ +L LF + + + FT V+ A ++ LG LH++V+ GF+
Sbjct: 85 GFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNH 144
Query: 200 NTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAM 259
+ ++L+ +Y + + DA KLFDE P+ VV WTA+ S T + REA+ LF M
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPD-RSVVTWTALFSGYTTSGRHREAIDLFKKM 203
Query: 260 HRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGK 319
G+ PD + +L+AC ++G L G+ + + + + N V ++L+++Y KCGK
Sbjct: 204 VE-MGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK 262
Query: 320 VGQARVVFDRLGDKNSVSWTAMLSAYCQN---KE-YEAVFELVRERGVSDLYAFGTVLRA 375
+ +AR VFD + +K+ V+W+ M+ Y N KE E ++++E D ++ L +
Sbjct: 263 MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 376 CSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITW 435
C+ + A+ LG+ R ++ + +AL+D+YAKCG + +F M+ ++ +
Sbjct: 323 CASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIM 382
Query: 436 NAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVD 495
NA I GLA+NG +F K G+ PD TF+G+L C H GL+ +G R+F +
Sbjct: 383 NAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISC 442
Query: 496 EYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAE 555
Y +K VEHY CM+DL GRA M+++A L+ + R + +W LL C D AE
Sbjct: 443 VYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAE 502
Query: 556 RVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
V +++I LEP +YV L NIY GRW++A E+R +M +G+KK+PG SWI E +
Sbjct: 503 TVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGK 561
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 203/410 (49%), Gaps = 21/410 (5%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
+ +L+ CT+ SS G LH+ +K G + D SLL++Y G L A LFD +
Sbjct: 114 FPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSG-RLNDAHKLFDEI 172
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
R ++ WT+L S YT +GR ++ LF +M+++ ++P+++ I V++A + DL G
Sbjct: 173 PDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGE 232
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
+ + N+ + + LV++Y + + A +FD E +D+V W+ +I N
Sbjct: 233 WIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVE-KDIVTWSTMIQGYASN 291
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
+E + LF+ M + L PD F+ L++CA+LG L G+ + + N+ +
Sbjct: 292 SFPKEGIELFLQMLQE-NLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFM 350
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYE---AVFELVRERGV 363
++L+DMY KCG + + VF + +K+ V A +S +N + AVF + G+
Sbjct: 351 ANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGI 410
Query: 364 S-DLYAFGTVLRACSGVAAVMLG----KEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
S D F +L C + G + C Y K R V +VDL+ + G +D
Sbjct: 411 SPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALK---RTVEHYGCMVDLWGRAGMLD 467
Query: 419 FAQRLFLSMEVR-NQITWNAMIGGLAQNGRGTEVLELFEDMIKE--GMEP 465
A RL M +R N I W A++ G R + +L E ++KE +EP
Sbjct: 468 DAYRLICDMPMRPNAIVWGALLSGC----RLVKDTQLAETVLKELIALEP 513
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 162/487 (33%), Positives = 265/487 (54%), Gaps = 34/487 (6%)
Query: 156 QMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNR 215
Q+L +P A T ++I S+ R L G +H + + GF VI + L+ MY +
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 216 AVRDALKLFDESPE------------------------------PEDVVGWTAIISTLTR 245
++ DA K+FDE P +D WTA+++ +
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194
Query: 246 NDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV 305
D EAL L+ M R P+ FT +AA A + +R+GKE+H +V G+ + V
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVF----ELVRER 361
+ SSL+DMYGKCG + +AR +FD++ +K+ VSWT+M+ Y ++ + F ELV
Sbjct: 255 LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSC 314
Query: 362 GVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
+ Y F VL AC+ + LGK+VH R G S+LVD+Y KCG ++ A+
Sbjct: 315 ERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAK 374
Query: 422 RLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG 481
+ + ++W ++IGG AQNG+ E L+ F+ ++K G +PD++TF+ VL AC+H G
Sbjct: 375 HVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAG 434
Query: 482 LVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVL 541
LV++G +F + +++ + +HY C++DLL R+ E+ +S++ + LWA +
Sbjct: 435 LVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASV 494
Query: 542 LGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
LG C+ + AE A+++ ++EP+ ++YV + NIY A G+W + ++RK M++ GV
Sbjct: 495 LGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVT 554
Query: 602 KLPGKSW 608
K PG SW
Sbjct: 555 KRPGSSW 561
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 227/481 (47%), Gaps = 54/481 (11%)
Query: 39 CKDGSLRQALHLLNTSQTTLDPNLKPV--LYASLLQTCTKTSSFLHGTTLHAHALKSGIH 96
C LR+A+ LL ++ KP Y +L+Q C++T + G +H H SG
Sbjct: 65 CGQKLLREAVQLLGRAK-------KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFV 117
Query: 97 SDRFVGNSLLTLYLKLG------------PH------------------LPQAQTLFDSL 126
+ N LL +Y K G P+ L +A+ LFD +
Sbjct: 118 PGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM 177
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDL-DMEPNAFTISSVITAASKLRDLALG 185
+D +WT++++ Y + +P +L L+S M + + PN FT+S + AA+ ++ + G
Sbjct: 178 TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRG 237
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTR 245
+H ++ G S+ V+ S+L+DMYG+ + +A +FD+ E +DVV WT++I +
Sbjct: 238 KEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVE-KDVVSWTSMIDRYFK 296
Query: 246 NDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV 305
+ +RE LF + C P+ +TF +L ACA+L GK++H + +G
Sbjct: 297 SSRWREGFSLFSELVGSCER-PNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSF 355
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAV---FELVRERG 362
SSL+DMY KCG + A+ V D + VSWT+++ QN + + F+L+ + G
Sbjct: 356 ASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSG 415
Query: 363 VS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVE-SALVDLYAKCGCVDFA 420
D F VL AC+ V G E K + LVDL A+ G +
Sbjct: 416 TKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQL 475
Query: 421 QRLFLSMEVR-NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPD----YITFIGVLF 475
+ + M ++ ++ W +++GG + G E +++ K +EP+ Y+T +
Sbjct: 476 KSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK--IEPENPVTYVTMANIYA 533
Query: 476 A 476
A
Sbjct: 534 A 534
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 160/344 (46%), Gaps = 43/344 (12%)
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG 299
I L + REA++L G P T+ L+ C+ L +GK++H + G
Sbjct: 61 IDVLCGQKLLREAVQLL-----GRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSG 115
Query: 300 ICGNVVVESSLLDMYGKCG----------------------------KVG---QARVVFD 328
+V+ + LL MY KCG +VG +AR +FD
Sbjct: 116 FVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFD 175
Query: 329 RLGDKNSVSWTAMLSAYCQNKEYE---AVFELVRERGVS--DLYAFGTVLRACSGVAAVM 383
+ +K+S SWTAM++ Y + + E ++ L++ S +++ + A + V +
Sbjct: 176 EMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIR 235
Query: 384 LGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLA 443
GKE+H VR G D ++ S+L+D+Y KCGC+D A+ +F + ++ ++W +MI
Sbjct: 236 RGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYF 295
Query: 444 QNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGV 503
++ R E LF +++ P+ TF GVL AC+ + G++ M G P
Sbjct: 296 KSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMT-RVGFDPYS 354
Query: 504 EHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTK 547
+ ++D+ + IE A+ +++ + D W L+G C +
Sbjct: 355 FASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQ 397
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 117/271 (43%), Gaps = 14/271 (5%)
Query: 325 VVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVML 384
VV +RL N + + C K +L+ + +++ CS A+
Sbjct: 46 VVVERLCRANR--FGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEE 103
Query: 385 GKEVHCQYVRKGGW-RDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLA 443
GK+VH +++R G+ +++ + L+ +YAKCG + A+++F M R+ +WN M+ G A
Sbjct: 104 GKKVH-EHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYA 162
Query: 444 QNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGV 503
+ G E +LF++M E D ++ ++ +E ++LM +P +
Sbjct: 163 EVGLLEEARKLFDEMT----EKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNI 218
Query: 504 EHYNCMIDLLGRAEMIEEAESL---LENADCRYDHSLWAVLLGACTKCSDYVTAERVARK 560
+ + + I + + + A D LW+ L+ KC A + K
Sbjct: 219 FTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDK 278
Query: 561 MIELEPDFHLSYVLLGNIYRAVGRWNDAMEI 591
++E + +S+ + + Y RW + +
Sbjct: 279 IVEKDV---VSWTSMIDRYFKSSRWREGFSL 306
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 166/556 (29%), Positives = 297/556 (53%), Gaps = 10/556 (1%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
++ LL+ F G +H +K G + +VG+SL+ +Y K + A F +
Sbjct: 104 FSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKC-ERVEDAFEAFKEI 162
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQM-LDLDMEPNAFTISSVITAASKLRDLALG 185
+ + ++W +LI+ + + + L M + + +A T + ++T L
Sbjct: 163 SEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLL 222
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTR 245
+HA V+ G I +A++ Y +V DA ++FD +D++ W ++I+ ++
Sbjct: 223 KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSK 282
Query: 246 NDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV 305
+++ A LF+ M R + D +T+ LL+AC+ GK LH V+ G+
Sbjct: 283 HELKESAFELFIQMQRH-WVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTS 341
Query: 306 VESSLLDMYGK--CGKVGQARVVFDRLGDKNSVSWTAMLSAYCQ---NKEYEAVFELVRE 360
++L+ MY + G + A +F+ L K+ +SW ++++ + Q +++ F +R
Sbjct: 342 ATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRS 401
Query: 361 RGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDF 419
+ D YAF +LR+CS +A + LG+++H + G + V S+L+ +Y+KCG ++
Sbjct: 402 SEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIES 461
Query: 420 AQRLFLSMEVRNQ-ITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACS 478
A++ F + ++ + WNAMI G AQ+G G L+LF M + ++ D++TF +L ACS
Sbjct: 462 ARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACS 521
Query: 479 HTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLW 538
HTGL+ EG LM Y I+P +EHY +DLLGRA ++ +A+ L+E+ D +
Sbjct: 522 HTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVL 581
Query: 539 AVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDR 598
LG C C + A +VA ++E+EP+ H +YV L ++Y + +W + ++K+M++R
Sbjct: 582 KTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKER 641
Query: 599 GVKKLPGKSWIGSENQ 614
GVKK+PG SWI NQ
Sbjct: 642 GVKKVPGWSWIEIRNQ 657
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 141/521 (27%), Positives = 258/521 (49%), Gaps = 17/521 (3%)
Query: 87 HAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGR 146
H +A+K G SD +V N +L Y+K G L A LFD + RD ++W ++IS YT G+
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFG-FLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 147 PINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSA 206
++ LF+ M + + ++ S ++ + ++ LG +H +VI G+ N + S+
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 207 LVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLV 266
LVDMY + V DA + F E EP + V W A+I+ + + A L M +
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEP-NSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT 200
Query: 267 PDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVV 326
D TF LL + + K++HAKV+ LG+ + + ++++ Y CG V A+ V
Sbjct: 201 MDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRV 260
Query: 327 FDRL-GDKNSVSWTAMLSAYCQNKEYEAVFELV----RERGVSDLYAFGTVLRACSGVAA 381
FD L G K+ +SW +M++ + +++ E+ FEL R +D+Y + +L ACSG
Sbjct: 261 FDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEH 320
Query: 382 VMLGKEVHCQYVRKGGWRDVIVESALVDLYAK--CGCVDFAQRLFLSMEVRNQITWNAMI 439
+ GK +H ++KG + +AL+ +Y + G ++ A LF S++ ++ I+WN++I
Sbjct: 321 QIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSII 380
Query: 440 GGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGI 499
G AQ G + ++ F + ++ D F +L +CS + G++ AL G
Sbjct: 381 TGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKS-GF 439
Query: 500 KPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLW-AVLLGACTKCSDYVTAE--- 555
+ +I + + +IE A + ++ W A++LG V+ +
Sbjct: 440 VSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFS 499
Query: 556 RVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLME 596
++ + ++L+ H+++ + G + +E+ LME
Sbjct: 500 QMCNQNVKLD---HVTFTAILTACSHTGLIQEGLELLNLME 537
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 175/554 (31%), Positives = 291/554 (52%), Gaps = 8/554 (1%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
+ SL+Q C L G++L++ +K G + V S+L +Y G L A+ +FD +
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCG-DLESARRIFDCV 260
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
RD +AW ++I + + + L F ML ++P FT S V+ SKL +LG
Sbjct: 261 NNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGK 320
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
+HA +I ++ + +AL+DMY +R+A +F P ++V W +IIS + N
Sbjct: 321 LIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNP-NLVSWNSIISGCSEN 379
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
+A+ ++ + R PD +TF ++A A GK LH +V LG +V V
Sbjct: 380 GFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFV 439
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQ--NKEYEAVF--ELVRERG 362
++LL MY K + A+ VFD + +++ V WT M+ + + N E F E+ RE+
Sbjct: 440 GTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKN 499
Query: 363 VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQR 422
SD ++ +V+ ACS +A + G+ HC +R G + V ALVD+Y K G + A+
Sbjct: 500 RSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAET 559
Query: 423 LFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGL 482
+F + WN+M+G +Q+G + L FE +++ G PD +T++ +L ACSH G
Sbjct: 560 IFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGS 619
Query: 483 VDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHS-LWAVL 541
+G+ + M E GIK G +HY+CM++L+ +A +++EA L+E + + + LW L
Sbjct: 620 TLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTL 678
Query: 542 LGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
L AC + A ++++L+P+ +++LL N+Y GRW D E+R+ +
Sbjct: 679 LSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASS 738
Query: 602 KLPGKSWIGSENQK 615
K PG SWI N
Sbjct: 739 KDPGLSWIEVNNNN 752
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 198/392 (50%), Gaps = 18/392 (4%)
Query: 100 FVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSL--ISAYTRAGRPINS----LQL 153
+ N+L+++Y++ L QA+ +FD + R+I+ L + Y G ++S L
Sbjct: 23 YANNNLISMYVRCSS-LEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGS 81
Query: 154 FSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNT---VISSALVDM 210
F + + + A ++ + + L +HA+V++ G + T ++ L+ M
Sbjct: 82 FQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM 141
Query: 211 YGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLV-PDG 269
Y R ++ A K+FD+ P +VV + A+ S +RN F + + H V P+
Sbjct: 142 YVRCGSLEQARKVFDKMPH-RNVVSYNALYSAYSRNPDF-ASYAFPLTTHMAFEYVKPNS 199
Query: 270 FTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDR 329
TF +L+ CA L + G L+++++ LG NVVV++S+L MY CG + AR +FD
Sbjct: 200 STFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDC 259
Query: 330 LGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDL----YAFGTVLRACSGVAAVMLG 385
+ ++++V+W M+ +N + E R +S + + + VL CS + + LG
Sbjct: 260 VNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLG 319
Query: 386 KEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQN 445
K +H + + D+ +++AL+D+Y CG + A +F + N ++WN++I G ++N
Sbjct: 320 KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSEN 379
Query: 446 GRGTEVLELFEDMIKEGM-EPDYITFIGVLFA 476
G G + + ++ +++ PD TF + A
Sbjct: 380 GFGEQAMLMYRRLLRMSTPRPDEYTFSAAISA 411
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 142/291 (48%), Gaps = 6/291 (2%)
Query: 60 PNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQA 119
P +++ + + F+HG LH K G FVG +LL++Y K A
Sbjct: 398 PRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFK-NREAESA 456
Query: 120 QTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKL 179
Q +FD + RD++ WT +I ++R G ++Q F +M + F++SSVI A S +
Sbjct: 457 QKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDM 516
Query: 180 RDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAI 239
L G H + I GF + ALVDMYG+N A +F + P D+ W ++
Sbjct: 517 AMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNP-DLKCWNSM 575
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG 299
+ +++ M +AL F + G +PD T+ +LLAAC++ G QGK L ++ G
Sbjct: 576 LGAYSQHGMVEKALSFFEQILEN-GFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQG 634
Query: 300 ICGNVVVESSLLDMYGKCGKVGQARVVFDR--LGDKNSVSWTAMLSAYCQN 348
I S ++++ K G V +A + ++ G+ + W +LSA C N
Sbjct: 635 IKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSA-CVN 684
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 189/588 (32%), Positives = 292/588 (49%), Gaps = 42/588 (7%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLG------------- 113
+ LL G +LHA +KS + S ++ N + LY K G
Sbjct: 11 FRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTE 70
Query: 114 -PHLPQ----------------AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQ 156
P++ A+ LFD + D +++ +LIS Y A ++ LF +
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 157 MLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRA 216
M L E + FT+S +I A DL LH +S GF S + +++A V Y +
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDLIKQ--LHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 217 VRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLL 276
+R+A+ +F E D V W ++I ++ +AL L+ M G D FT ++L
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK-GFKIDMFTLASVL 247
Query: 277 AACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVG---QARVVFDRLGDK 333
A +L L G++ H K++ G N V S L+D Y KCG + VF +
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP 307
Query: 334 NSVSWTAMLSAYCQNKEY--EAVFELVRERGV---SDLYAFGTVLRACSGVAAVMLGKEV 388
+ V W M+S Y N+E EAV + + + D +F V ACS +++ K++
Sbjct: 308 DLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQI 367
Query: 389 HCQYVRKGGWRDVI-VESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGR 447
H ++ + I V +AL+ LY K G + A+ +F M N +++N MI G AQ+G
Sbjct: 368 HGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGH 427
Query: 448 GTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYN 507
GTE L L++ M+ G+ P+ ITF+ VL AC+H G VDEG+ YF M + + I+P EHY+
Sbjct: 428 GTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYS 487
Query: 508 CMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPD 567
CMIDLLGRA +EEAE ++ + WA LLGAC K + AER A +++ ++P
Sbjct: 488 CMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPL 547
Query: 568 FHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQK 615
YV+L N+Y +W + +RK M + ++K PG SWI + +K
Sbjct: 548 AATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKK 595
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 288 bits (737), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 169/552 (30%), Positives = 298/552 (53%), Gaps = 13/552 (2%)
Query: 71 LQTCTKTSSFLHGTTLHAHALKSGIHSDR-FVGNSLLTLYLKLGPHLPQAQTLFDSLAVR 129
LQ C + ++ G +H ++ G D G SL+ +Y K G L + L + R
Sbjct: 67 LQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCG--LMRRAVLVFGGSER 124
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
D+ + +LIS + G P+++++ + +M + P+ +T S++ + + +L+ +H
Sbjct: 125 DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKVH 183
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMF 249
+ GF S+ + S LV Y + +V DA K+FDE P+ +D V W A+++ ++ F
Sbjct: 184 GLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRF 243
Query: 250 REALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESS 309
+AL +F M R G+ T ++L+A G + G+ +H V G ++VV ++
Sbjct: 244 EDALLVFSKM-REEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNA 302
Query: 310 LLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSA--YCQNKEYE-AVFELVRERGV-SD 365
L+DMYGK + +A +F+ + +++ +W ++L YC + + A+FE + G+ D
Sbjct: 303 LIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPD 362
Query: 366 LYAFGTVLRACSGVAAVMLGKEVHCQYVRKG----GWRDVIVESALVDLYAKCGCVDFAQ 421
+ TVL C +A++ G+E+H + G + + ++L+D+Y KCG + A+
Sbjct: 363 IVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDAR 422
Query: 422 RLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG 481
+F SM V++ +WN MI G G L++F M + G++PD ITF+G+L ACSH+G
Sbjct: 423 MVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSG 482
Query: 482 LVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVL 541
++EGR + A M Y I P +HY C+ID+LGRA+ +EEA L + + +W +
Sbjct: 483 FLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSI 542
Query: 542 LGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
L +C + A +++ ELEP+ YVL+ N+Y G++ + +++R M + VK
Sbjct: 543 LSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVK 602
Query: 602 KLPGKSWIGSEN 613
K PG SWI +N
Sbjct: 603 KTPGCSWIVLKN 614
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 144/286 (50%), Gaps = 15/286 (5%)
Query: 68 ASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLA 127
S+L T + +G ++H A+K+G SD V N+L+ +Y K L +A ++F+++
Sbjct: 266 TSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGK-SKWLEEANSIFEAMD 324
Query: 128 VRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGAC 187
RD+ W S++ + G +L LF +ML + P+ T+++V+ +L L G
Sbjct: 325 ERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGRE 384
Query: 188 LHAMVISRGF----HSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTL 243
+H +I G SN I ++L+DMY + +RDA +FD S +D W +I+
Sbjct: 385 IHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFD-SMRVKDSASWNIMINGY 443
Query: 244 TRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGN 303
AL +F M R G+ PD TF LL AC++ G+L +G+ A+ + N
Sbjct: 444 GVQSCGELALDMFSCMCRA-GVKPDEITFVGLLQACSHSGFLNEGRNFLAQ---METVYN 499
Query: 304 VVVESS----LLDMYGKCGKVGQA-RVVFDRLGDKNSVSWTAMLSA 344
++ S ++DM G+ K+ +A + + N V W ++LS+
Sbjct: 500 ILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSS 545
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 6/183 (3%)
Query: 65 VLYASLLQTCTKTSSFLHGTTLHAHALKSGI----HSDRFVGNSLLTLYLKLGPHLPQAQ 120
V ++L TC + +S G +H + + SG+ S+ F+ NSL+ +Y+K G L A+
Sbjct: 364 VTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGD-LRDAR 422
Query: 121 TLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLR 180
+FDS+ V+D +W +I+ Y +L +FS M ++P+ T ++ A S
Sbjct: 423 MVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSG 482
Query: 181 DLALG-ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAI 239
L G L M + + ++DM GR + +A +L P ++ V W +I
Sbjct: 483 FLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSI 542
Query: 240 IST 242
+S+
Sbjct: 543 LSS 545
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/468 (33%), Positives = 257/468 (54%), Gaps = 44/468 (9%)
Query: 180 RDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAI 239
R L LHA ++ G +++ LV++YG+ A AL++FDE P D + W ++
Sbjct: 17 RTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPH-RDHIAWASV 75
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG 299
++ L + ++ + L +F ++ GL PD F F L+ ACANLG + G+++H +
Sbjct: 76 LTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSE 135
Query: 300 ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVR 359
+ VV+SSL+DMY KCG + A+ VFD + KN++SWTAM+S Y ++ E EL R
Sbjct: 136 YANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFR 195
Query: 360 ERGVSDLYAF------------------------------------GTVLRACSGVAAVM 383
V +LY++ +++ AC+ +AA +
Sbjct: 196 ILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASI 255
Query: 384 LGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLA 443
G++VH + G V + +AL+D+YAKC V A+ +F M R+ ++W ++I G+A
Sbjct: 256 AGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMA 315
Query: 444 QNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGV 503
Q+G+ + L L++DM+ G++P+ +TF+G+++ACSH G V++GR F M +YGI+P +
Sbjct: 316 QHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSL 375
Query: 504 EHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIE 563
+HY C++DLLGR+ +++EAE+L+ D WA LL AC + R+A ++
Sbjct: 376 QHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVS 435
Query: 564 LEPDFHL----SYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKS 607
F L +Y+LL NIY + W E R+ + + V+K PG S
Sbjct: 436 ---SFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHS 480
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 218/477 (45%), Gaps = 45/477 (9%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
Y LQ C + + LHAH +K GI + N+L+ +Y K G A +FD +
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGA-ASHALQVFDEM 64
Query: 127 AVRDIIAWTSLISAYTRAGRPINSL-QLFSQMLDLDMEPNAFTISSVITAASKLRDLALG 185
RD IAW S+++A +A +L S + P+ F S+++ A + L + G
Sbjct: 65 PHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHG 124
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTR 245
+H I + ++ V+ S+LVDMY + + A +FD S ++ + WTA++S +
Sbjct: 125 RQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFD-SIRVKNTISWTAMVSGYAK 183
Query: 246 N-------DMFR------------------------EALRLFVAMHRGCGLVPDGFTFGT 274
+ ++FR EA +F M R + D +
Sbjct: 184 SGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 243
Query: 275 LLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKN 334
++ ACANL G+++H V+ LG V + ++L+DMY KC V A+ +F R+ ++
Sbjct: 244 IVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRD 303
Query: 335 SVSWTAMLSAYCQNKEYE---AVFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHC 390
VSWT+++ Q+ + E A+++ + GV + F ++ ACS V V G+E+
Sbjct: 304 VVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQ 363
Query: 391 QYVRKGGWRDVIVE-SALVDLYAKCGCVDFAQRLFLSMEV-RNQITWNAMIGGLAQNGRG 448
+ G R + + L+DL + G +D A+ L +M ++ TW A++ + GRG
Sbjct: 364 SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRG 423
Query: 449 TEVLELFEDMIKEGMEPD---YITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPG 502
+ + + ++ D YI + + S G V E RR M E PG
Sbjct: 424 QMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEM--EVRKDPG 478
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 160/319 (50%), Gaps = 39/319 (12%)
Query: 62 LKP--VLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQA 119
L+P ++++L++ C S HG +H H + S +D V +SL+ +Y K G L A
Sbjct: 101 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGL-LNSA 159
Query: 120 QTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQL-------------------------- 153
+ +FDS+ V++ I+WT+++S Y ++GR +L+L
Sbjct: 160 KAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGL 219
Query: 154 --FSQMLDLDMEP----NAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSAL 207
FS ++ E + +SS++ A + L G +H +VI+ GF S IS+AL
Sbjct: 220 EAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNAL 279
Query: 208 VDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVP 267
+DMY + V A +F DVV WT++I + ++ +AL L+ M G+ P
Sbjct: 280 IDMYAKCSDVIAAKDIFSRMRH-RDVVSWTSLIVGMAQHGQAEKALALYDDM-VSHGVKP 337
Query: 268 DGFTFGTLLAACANLGWLRQGKELHAKVV-GLGICGNVVVESSLLDMYGKCGKVGQARVV 326
+ TF L+ AC+++G++ +G+EL + GI ++ + LLD+ G+ G + +A +
Sbjct: 338 NEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENL 397
Query: 327 FDRLG-DKNSVSWTAMLSA 344
+ + +W A+LSA
Sbjct: 398 IHTMPFPPDEPTWAALLSA 416
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 77/158 (48%), Gaps = 4/158 (2%)
Query: 373 LRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQ 432
L+ C+ + K +H V+ G + + + LV++Y KCG A ++F M R+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 433 ITWNAMIGGLAQ-NGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRR-YF 490
I W +++ L Q N G + G+ PD F ++ AC++ G +D GR+ +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 491 ALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLEN 528
+V EY V+ + ++D+ + ++ A+++ ++
Sbjct: 130 HFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDS 165
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/540 (32%), Positives = 277/540 (51%), Gaps = 14/540 (2%)
Query: 80 FLHGTTLHAHALKSGIHSDR--FVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSL 137
FLH +H L S I R + LL A+ L L I W SL
Sbjct: 14 FLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSL 73
Query: 138 ISAYTRAGRPIN---SLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVIS 194
I ++ G +N S + M + P+ T ++ A KLRD + HA ++
Sbjct: 74 IGHFS-GGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHAHIVK 131
Query: 195 RGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALR 254
G S+ + ++L+ Y + A +LFD E +DVV WTA+I RN EA+
Sbjct: 132 FGLDSDPFVRNSLISGYSSSGLFDFASRLFD-GAEDKDVVTWTAMIDGFVRNGSASEAMV 190
Query: 255 LFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG-ICGNVVVESSLLDM 313
FV M + G+ + T ++L A + +R G+ +H + G + +V + SSL+DM
Sbjct: 191 YFVEMKK-TGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDM 249
Query: 314 YGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEA---VFE-LVRERGVSDLYAF 369
YGKC A+ VFD + +N V+WTA+++ Y Q++ ++ VFE +++ +
Sbjct: 250 YGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTL 309
Query: 370 GTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEV 429
+VL AC+ V A+ G+ VHC ++ + + L+DLY KCGC++ A +F +
Sbjct: 310 SSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHE 369
Query: 430 RNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRY 489
+N TW AMI G A +G + +LF M+ + P+ +TF+ VL AC+H GLV+EGRR
Sbjct: 370 KNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRL 429
Query: 490 FALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCS 549
F M + ++P +HY CM+DL GR ++EEA++L+E + +W L G+C
Sbjct: 430 FLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHK 489
Query: 550 DYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
DY + A ++I+L+P Y LL N+Y W++ +RK M+D+ V K PG SWI
Sbjct: 490 DYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWI 549
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 169/541 (31%), Positives = 290/541 (53%), Gaps = 8/541 (1%)
Query: 83 GTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYT 142
G +H +K G S V N+LL +Y G + +A +F + +D+I+W SL++++
Sbjct: 280 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV-EANLVFKQMPTKDLISWNSLMASFV 338
Query: 143 RAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTV 202
GR +++L L M+ N T +S + A G LH +V+ G N +
Sbjct: 339 NDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI 398
Query: 203 ISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRG 262
I +ALV MYG+ + ++ ++ + P DVV W A+I ++ +AL F M R
Sbjct: 399 IGNALVSMYGKIGEMSESRRVLLQMPR-RDVVAWNALIGGYAEDEDPDKALAAFQTM-RV 456
Query: 263 CGLVPDGFTFGTLLAACANLG-WLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVG 321
G+ + T ++L+AC G L +GK LHA +V G + V++SL+ MY KCG +
Sbjct: 457 EGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 516
Query: 322 QARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELV---RERGVS-DLYAFGTVLRACS 377
++ +F+ L ++N ++W AML+A + E V +LV R GVS D ++F L A +
Sbjct: 517 SSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAA 576
Query: 378 GVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNA 437
+A + G+++H V+ G D + +A D+Y+KCG + ++ R+ +WN
Sbjct: 577 KLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNI 636
Query: 438 MIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEY 497
+I L ++G EV F +M++ G++P ++TF+ +L ACSH GLVD+G Y+ ++ ++
Sbjct: 637 LISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDF 696
Query: 498 GIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERV 557
G++P +EH C+IDLLGR+ + EAE+ + + + +W LL +C + +
Sbjct: 697 GLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKA 756
Query: 558 ARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQKGS 617
A + +LEP+ YVL N++ GRW D +RK M + +KK SW+ +++ S
Sbjct: 757 AENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSS 816
Query: 618 L 618
Sbjct: 817 F 817
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 147/505 (29%), Positives = 262/505 (51%), Gaps = 23/505 (4%)
Query: 83 GTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYT 142
G + +KSG+ S V NSL+++ +G ++ A +FD ++ RD I+W S+ +AY
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMG-NVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 143 RAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTV 202
+ G S ++FS M E N+ T+S++++ + G +H +V+ GF S
Sbjct: 238 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 297
Query: 203 ISSALVDMY-GRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHR 261
+ + L+ MY G R+V L +F + P +D++ W +++++ + +AL L +M
Sbjct: 298 VCNTLLRMYAGAGRSVEANL-VFKQMP-TKDLISWNSLMASFVNDGRSLDALGLLCSM-I 354
Query: 262 GCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVG 321
G + TF + LAAC + +G+ LH VV G+ N ++ ++L+ MYGK G++
Sbjct: 355 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 414
Query: 322 QARVVFDRLGDKNSVSWTAMLSAYCQNKEYE---AVFELVRERGVSDLY-AFGTVLRACS 377
++R V ++ ++ V+W A++ Y ++++ + A F+ +R GVS Y +VL AC
Sbjct: 415 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 474
Query: 378 GVAAVM-LGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWN 436
++ GK +H V G D V+++L+ +YAKCG + +Q LF ++ RN ITWN
Sbjct: 475 LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWN 534
Query: 437 AMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDE 496
AM+ A +G G EVL+L M G+ D +F L A + +++EG++ L
Sbjct: 535 AMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGL---- 590
Query: 497 YGIKPGVEH----YNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYV 552
+K G EH +N D+ + I E +L + R S W +L+ A + +
Sbjct: 591 -AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPS-WNILISALGRHGYFE 648
Query: 553 TAERVARKMIEL--EPDFHLSYVLL 575
+M+E+ +P H+++V L
Sbjct: 649 EVCATFHEMLEMGIKPG-HVTFVSL 672
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 224/452 (49%), Gaps = 18/452 (3%)
Query: 108 LYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAF 167
+Y K G P A+ LFD + VR+ ++W +++S R G + ++ F +M DL ++P++F
Sbjct: 1 MYTKFGRVKP-ARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSF 59
Query: 168 TISSVITA----ASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKL 223
I+S++TA S R+ G +H V G S+ +S+A++ +YG V + K+
Sbjct: 60 VIASLVTACGRSGSMFRE---GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKV 116
Query: 224 FDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLG 283
F+E P+ +VV WT+++ + E + ++ M RG G+ + + ++++C L
Sbjct: 117 FEEMPD-RNVVSWTSLMVGYSDKGEPEEVIDIYKGM-RGEGVGCNENSMSLVISSCGLLK 174
Query: 284 WLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLS 343
G+++ +VV G+ + VE+SL+ M G G V A +FD++ +++++SW ++ +
Sbjct: 175 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 234
Query: 344 AYCQNKEYEA---VFELVRE-RGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR 399
AY QN E +F L+R + T+L V G+ +H V+ G
Sbjct: 235 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 294
Query: 400 DVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMI 459
V V + L+ +YA G A +F M ++ I+WN+++ +GR + L L MI
Sbjct: 295 VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 354
Query: 460 KEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGR-AEM 518
G +Y+TF L AC ++GR L+V G+ N ++ + G+ EM
Sbjct: 355 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVS-GLFYNQIIGNALVSMYGKIGEM 413
Query: 519 IEEAESLLENADCRYDHSLWAVLLGACTKCSD 550
E LL+ R D W L+G + D
Sbjct: 414 SESRRVLLQMP--RRDVVAWNALIGGYAEDED 443
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 169/541 (31%), Positives = 290/541 (53%), Gaps = 8/541 (1%)
Query: 83 GTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYT 142
G +H +K G S V N+LL +Y G + +A +F + +D+I+W SL++++
Sbjct: 263 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV-EANLVFKQMPTKDLISWNSLMASFV 321
Query: 143 RAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTV 202
GR +++L L M+ N T +S + A G LH +V+ G N +
Sbjct: 322 NDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI 381
Query: 203 ISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRG 262
I +ALV MYG+ + ++ ++ + P DVV W A+I ++ +AL F M R
Sbjct: 382 IGNALVSMYGKIGEMSESRRVLLQMPR-RDVVAWNALIGGYAEDEDPDKALAAFQTM-RV 439
Query: 263 CGLVPDGFTFGTLLAACANLG-WLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVG 321
G+ + T ++L+AC G L +GK LHA +V G + V++SL+ MY KCG +
Sbjct: 440 EGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 499
Query: 322 QARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELV---RERGVS-DLYAFGTVLRACS 377
++ +F+ L ++N ++W AML+A + E V +LV R GVS D ++F L A +
Sbjct: 500 SSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAA 559
Query: 378 GVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNA 437
+A + G+++H V+ G D + +A D+Y+KCG + ++ R+ +WN
Sbjct: 560 KLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNI 619
Query: 438 MIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEY 497
+I L ++G EV F +M++ G++P ++TF+ +L ACSH GLVD+G Y+ ++ ++
Sbjct: 620 LISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDF 679
Query: 498 GIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERV 557
G++P +EH C+IDLLGR+ + EAE+ + + + +W LL +C + +
Sbjct: 680 GLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKA 739
Query: 558 ARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQKGS 617
A + +LEP+ YVL N++ GRW D +RK M + +KK SW+ +++ S
Sbjct: 740 AENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSS 799
Query: 618 L 618
Sbjct: 800 F 800
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/505 (29%), Positives = 262/505 (51%), Gaps = 23/505 (4%)
Query: 83 GTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYT 142
G + +KSG+ S V NSL+++ +G ++ A +FD ++ RD I+W S+ +AY
Sbjct: 162 GRQIIGQVVKSGLESKLAVENSLISMLGSMG-NVDYANYIFDQMSERDTISWNSIAAAYA 220
Query: 143 RAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTV 202
+ G S ++FS M E N+ T+S++++ + G +H +V+ GF S
Sbjct: 221 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 280
Query: 203 ISSALVDMY-GRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHR 261
+ + L+ MY G R+V L +F + P +D++ W +++++ + +AL L +M
Sbjct: 281 VCNTLLRMYAGAGRSVEANL-VFKQMP-TKDLISWNSLMASFVNDGRSLDALGLLCSM-I 337
Query: 262 GCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVG 321
G + TF + LAAC + +G+ LH VV G+ N ++ ++L+ MYGK G++
Sbjct: 338 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 397
Query: 322 QARVVFDRLGDKNSVSWTAMLSAYCQNKEYE---AVFELVRERGVSDLY-AFGTVLRACS 377
++R V ++ ++ V+W A++ Y ++++ + A F+ +R GVS Y +VL AC
Sbjct: 398 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 457
Query: 378 GVAAVM-LGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWN 436
++ GK +H V G D V+++L+ +YAKCG + +Q LF ++ RN ITWN
Sbjct: 458 LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWN 517
Query: 437 AMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDE 496
AM+ A +G G EVL+L M G+ D +F L A + +++EG++ L V
Sbjct: 518 AMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV-- 575
Query: 497 YGIKPGVEH----YNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYV 552
K G EH +N D+ + I E +L + R S W +L+ A + +
Sbjct: 576 ---KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPS-WNILISALGRHGYFE 631
Query: 553 TAERVARKMIEL--EPDFHLSYVLL 575
+M+E+ +P H+++V L
Sbjct: 632 EVCATFHEMLEMGIKPG-HVTFVSL 655
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/513 (27%), Positives = 254/513 (49%), Gaps = 15/513 (2%)
Query: 42 GSLRQALHL--LNTSQTTLDPNLKP--VLYASLLQTCTKTSS-FLHGTTLHAHALKSGIH 96
G +R L+L + + D +KP + ASL+ C ++ S F G +H KSG+
Sbjct: 15 GIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLL 74
Query: 97 SDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQ 156
SD +V ++L LY G + ++ +F+ + R++++WTSL+ Y+ G P + ++
Sbjct: 75 SDVYVSTAILHLYGVYGL-VSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKG 133
Query: 157 MLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRA 216
M + N ++S VI++ L+D +LG + V+ G S + ++L+ M G
Sbjct: 134 MRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGN 193
Query: 217 VRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLL 276
V A +FD+ E D + W +I + +N E+ R+F M R V + T TLL
Sbjct: 194 VDYANYIFDQMSE-RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV-NSTTVSTLL 251
Query: 277 AACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSV 336
+ ++ + G+ +H VV +G V V ++LL MY G+ +A +VF ++ K+ +
Sbjct: 252 SVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLI 311
Query: 337 SWTAMLSAYCQN-KEYEA---VFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQY 392
SW ++++++ + + +A + ++ + F + L AC G+ +H
Sbjct: 312 SWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV 371
Query: 393 VRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVL 452
V G + + I+ +ALV +Y K G + ++R+ L M R+ + WNA+IGG A++ + L
Sbjct: 372 VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKAL 431
Query: 453 ELFEDMIKEGMEPDYITFIGVLFACSHTG-LVDEGRRYFALMVDEYGIKPGVEHYNCMID 511
F+ M EG+ +YIT + VL AC G L++ G+ A +V G + N +I
Sbjct: 432 AAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEHVKNSLIT 490
Query: 512 LLGRAEMIEEAESLLENADCRYDHSLWAVLLGA 544
+ + + ++ L D R + W +L A
Sbjct: 491 MYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAA 522
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 214/434 (49%), Gaps = 17/434 (3%)
Query: 126 LAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITA----ASKLRD 181
+ VR+ ++W +++S R G + ++ F +M DL ++P++F I+S++TA S R+
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 182 LALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIS 241
G +H V G S+ +S+A++ +YG V + K+F+E P+ +VV WT+++
Sbjct: 61 ---GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD-RNVVSWTSLMV 116
Query: 242 TLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGIC 301
+ E + ++ M RG G+ + + ++++C L G+++ +VV G+
Sbjct: 117 GYSDKGEPEEVIDIYKGM-RGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLE 175
Query: 302 GNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEA---VFELV 358
+ VE+SL+ M G G V A +FD++ +++++SW ++ +AY QN E +F L+
Sbjct: 176 SKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 235
Query: 359 RE-RGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCV 417
R + T+L V G+ +H V+ G V V + L+ +YA G
Sbjct: 236 RRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS 295
Query: 418 DFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFAC 477
A +F M ++ I+WN+++ +GR + L L MI G +Y+TF L AC
Sbjct: 296 VEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 355
Query: 478 SHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGR-AEMIEEAESLLENADCRYDHS 536
++GR L+V G+ N ++ + G+ EM E LL+ R D
Sbjct: 356 FTPDFFEKGRILHGLVVVS-GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP--RRDVV 412
Query: 537 LWAVLLGACTKCSD 550
W L+G + D
Sbjct: 413 AWNALIGGYAEDED 426
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 285 bits (729), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 178/566 (31%), Positives = 285/566 (50%), Gaps = 22/566 (3%)
Query: 58 LDPNLKPV--LYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPH 115
L+ ++P Y +L+ C + G +H+H S +D +V +L+ Y K G
Sbjct: 95 LNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCG-E 153
Query: 116 LPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLD-MEPNAFTISSVIT 174
L A +FD + RD++AW ++IS ++ + + LF M +D + PN TI +
Sbjct: 154 LEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFP 213
Query: 175 AASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVV 234
A + L G +H GF ++ V+ + ++D+Y +++ + A ++FD + +V
Sbjct: 214 ALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVT 273
Query: 235 GWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFT------FGTLLAACANLGWLRQG 288
W+A+I N+M +EA +F M LV D G +L CA G L G
Sbjct: 274 -WSAMIGGYVENEMIKEAGEVFFQM-----LVNDNVAMVTPVAIGLILMGCARFGDLSGG 327
Query: 289 KELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN 348
+ +H V G ++ V+++++ Y K G + A F +G K+ +S+ ++++ N
Sbjct: 328 RCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVN 387
Query: 349 KEYEAVFELVRERGVS----DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVE 404
E F L E S D+ VL ACS +AA+ G H V G + +
Sbjct: 388 CRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSIC 447
Query: 405 SALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGME 464
+AL+D+Y KCG +D A+R+F +M R+ ++WN M+ G +G G E L LF M + G+
Sbjct: 448 NALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVN 507
Query: 465 PDYITFIGVLFACSHTGLVDEGRRYFALMV-DEYGIKPGVEHYNCMIDLLGRAEMIEEAE 523
PD +T + +L ACSH+GLVDEG++ F M ++ + P ++HYNCM DLL RA ++EA
Sbjct: 508 PDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAY 567
Query: 524 SLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVG 583
+ D + LL AC + V++KM L S VLL N Y A
Sbjct: 568 DFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTE-SLVLLSNTYSAAE 626
Query: 584 RWNDAMEIRKLMEDRGVKKLPGKSWI 609
RW DA IR + + RG+ K PG SW+
Sbjct: 627 RWEDAARIRMIQKKRGLLKTPGYSWV 652
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 144/486 (29%), Positives = 241/486 (49%), Gaps = 13/486 (2%)
Query: 66 LYASLLQTCTKTSSFLHGTTLHAHALKSGIH-SDRFVGNSLLTLYLKLGPHLPQAQTLFD 124
++ SLL+TC ++ + + G +H H LK + S V +L LY + A+ +FD
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCN-EVELARHVFD 59
Query: 125 SLAVRDI--IAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDL 182
+ I IAW +I AY +L L+ +ML+ + P +T V+ A + LR +
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI 119
Query: 183 ALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIST 242
G +H+ V F ++ + +ALVD Y + + A+K+FDE P+ D+V W A+IS
Sbjct: 120 DDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPK-RDMVAWNAMISG 178
Query: 243 LTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICG 302
+ + + + LF+ M R GL P+ T + A G LR+GK +H +G
Sbjct: 179 FSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSN 238
Query: 303 NVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERG 362
++VV++ +LD+Y K + AR VFD KN V+W+AM+ Y +N+ + E+ +
Sbjct: 239 DLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML 298
Query: 363 VSD------LYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGC 416
V+D A G +L C+ + G+ VHC V+ G D+ V++ ++ YAK G
Sbjct: 299 VNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGS 358
Query: 417 VDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFA 476
+ A R F + +++ I++N++I G N R E LF +M G+ PD T +GVL A
Sbjct: 359 LCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTA 418
Query: 477 CSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHS 536
CSH + G V +G N ++D+ + ++ A+ + + R D
Sbjct: 419 CSHLAALGHGSSCHGYCV-VHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKR-DIV 476
Query: 537 LWAVLL 542
W +L
Sbjct: 477 SWNTML 482
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 285 bits (729), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 272/532 (51%), Gaps = 44/532 (8%)
Query: 83 GTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYT 142
G +H AL+ G D + NSLL +Y K + A+ +F + ++++W +I +
Sbjct: 268 GKQIHCLALRLGFGGDLHLNNSLLEIYAK-NKDMNGAELIFAEMPEVNVVSWNIMIVGFG 326
Query: 143 RAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTV 202
+ R S++ ++M D +PN T SV LGAC
Sbjct: 327 QEYRSDKSVEFLTRMRDSGFQPNEVTCISV-----------LGACF-------------- 361
Query: 203 ISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRG 262
R+ V ++F P+P V W A++S + + + EA+ F M
Sbjct: 362 ----------RSGDVETGRRIFSSIPQPS-VSAWNAMLSGYSNYEHYEEAISNFRQMQFQ 410
Query: 263 CGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQ 322
L PD T +L++CA L +L GK++H V+ I N + S L+ +Y +C K+
Sbjct: 411 -NLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEI 469
Query: 323 ARVVFDR-LGDKNSVSWTAMLSAYCQN---KEYEAVFELVRERGV--SDLYAFGTVLRAC 376
+ +FD + + + W +M+S + N + +F + + V + +F TVL +C
Sbjct: 470 SECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSC 529
Query: 377 SGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWN 436
S + +++ G++ H V+ G D VE+AL D+Y KCG +D A++ F ++ +N + WN
Sbjct: 530 SRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWN 589
Query: 437 AMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDE 496
MI G NGRG E + L+ MI G +PD ITF+ VL ACSH+GLV+ G + M
Sbjct: 590 EMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRI 649
Query: 497 YGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAER 556
+GI+P ++HY C++D LGRA +E+AE L E + LW +LL +C D A R
Sbjct: 650 HGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARR 709
Query: 557 VARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSW 608
VA K++ L+P +YVLL N Y ++ +W+D+ ++ LM V K PG+SW
Sbjct: 710 VAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSW 761
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 134/473 (28%), Positives = 223/473 (47%), Gaps = 60/473 (12%)
Query: 185 GACLHAMVISRGFHSNTVISSALVDMYGR------------NRAVRD------------- 219
G +H ++ G S+T + + L+D+Y +VRD
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 220 ------ALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGC-GLVPDGFTF 272
A ++FD PE DVV W +IS L R +AL ++ M C G +P FT
Sbjct: 85 VGDLGEACEVFDGMPE-RDVVSWNNMISVLVRKGFEEKALVVYKRMV--CDGFLPSRFTL 141
Query: 273 GTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARV-VFDRLG 331
++L+AC+ + G H V G+ N+ V ++LL MY KCG + V VF+ L
Sbjct: 142 ASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLS 201
Query: 332 DKNSVSWTAMLSAYC-QNKEYEAV--FELVRERGV-------SDLYAFGTVLRACSGVAA 381
N VS+TA++ +NK EAV F L+ E+GV S++ + C ++
Sbjct: 202 QPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSE 261
Query: 382 VM---LGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAM 438
+ LGK++HC +R G D+ + ++L+++YAK ++ A+ +F M N ++WN M
Sbjct: 262 IYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIM 321
Query: 439 IGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYG 498
I G Q R + +E M G +P+ +T I VL AC +G V+ GRR F+ +
Sbjct: 322 IVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP---- 377
Query: 499 IKPGVEHYNCMIDLLGRAEMIEEAES---LLENADCRYDHSLWAVLLGACTKCSDYVTAE 555
+P V +N M+ E EEA S ++ + + D + +V+L +C + +
Sbjct: 378 -QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGK 436
Query: 556 RVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSW 608
++ +I E + S+++ G I AV + MEI + + D + +L W
Sbjct: 437 QIHGVVIRTEISKN-SHIVSGLI--AVYSECEKMEISECIFDDCINELDIACW 486
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/515 (23%), Positives = 223/515 (43%), Gaps = 74/515 (14%)
Query: 68 ASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGP------------- 114
ASLL+ L G +H ++ G+ SD ++ N LL LY++ G
Sbjct: 10 ASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSV 69
Query: 115 -----------------HLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQM 157
L +A +FD + RD+++W ++IS R G +L ++ +M
Sbjct: 70 RDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM 129
Query: 158 LDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAV 217
+ P+ FT++SV++A SK+ D G H + + G N + +AL+ MY + +
Sbjct: 130 VCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFI 189
Query: 218 RD-ALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLL 276
D +++F+ +P + V +TA+I L R + EA+++F M G+ D +L
Sbjct: 190 VDYGVRVFESLSQPNE-VSYTAVIGGLARENKVLEAVQMFRLMCEK-GVQVDSVCLSNIL 247
Query: 277 A------ACANLGWL---RQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVF 327
+ C +L + GK++H + LG G++ + +SLL++Y K + A ++F
Sbjct: 248 SISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIF 307
Query: 328 DRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKE 387
+ + N VSW M+ + Q + E F T +R SG E
Sbjct: 308 AEMPEVNVVSWNIMIVGFGQEYRSDKSVE------------FLTRMRD-SGFQP----NE 350
Query: 388 VHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGR 447
V C V +R G V+ +R+F S+ + WNAM+ G +
Sbjct: 351 VTCISVLGACFRS--------------GDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEH 396
Query: 448 GTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYN 507
E + F M + ++PD T +L +C+ ++ G++ +++ I +
Sbjct: 397 YEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVI-RTEISKNSHIVS 455
Query: 508 CMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLL 542
+I + E +E +E + ++ D + W ++
Sbjct: 456 GLIAVYSECEKMEISECIFDDCINELDIACWNSMI 490
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
+A++L +C++ S LHG H +KSG SD FV +L +Y K G + A+ FD++
Sbjct: 522 FATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCG-EIDSARQFFDAV 580
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALG- 185
++ + W +I Y GR ++ L+ +M+ +P+ T SV+TA S + G
Sbjct: 581 LRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGL 640
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIST 242
L +M G +VD GR + DA KL + +P V W ++S+
Sbjct: 641 EILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSS 697
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 285 bits (728), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 164/488 (33%), Positives = 273/488 (55%), Gaps = 16/488 (3%)
Query: 132 IAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAM 191
I+ LI + + G+ ++++ SQ + P+ T +I L+ +H
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 192 VISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFRE 251
++ G + +++ L+ MY +V A K+FD++ + W A+ LT E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKT-RKRTIYVWNALFRALTLAGHGEE 161
Query: 252 ALRLFVAMHRGCGLVPDGFTFGTLLAACA----NLGWLRQGKELHAKVVGLGICGNVVVE 307
L L+ M+R G+ D FT+ +L AC + L +GKE+HA + G +V +
Sbjct: 162 VLGLYWKMNR-IGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIM 220
Query: 308 SSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN-KEYEAVF---ELVRERGV 363
++L+DMY + G V A VF + +N VSW+AM++ Y +N K +EA+ E++RE
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKD 280
Query: 364 S--DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
S + +VL+AC+ +AA+ GK +H +R+G + V SALV +Y +CG ++ Q
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQ 340
Query: 422 RLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG 481
R+F M R+ ++WN++I +G G + +++FE+M+ G P +TF+ VL ACSH G
Sbjct: 341 RVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEG 400
Query: 482 LVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVL 541
LV+EG+R F M ++GIKP +EHY CM+DLLGRA ++EA ++++ +W L
Sbjct: 401 LVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSL 460
Query: 542 LGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
LG+C + AER +R++ LEP +YVLL +IY W++ ++KL+E RG++
Sbjct: 461 LGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQ 520
Query: 602 KLPGKSWI 609
KLPG+ W+
Sbjct: 521 KLPGRCWM 528
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/434 (31%), Positives = 218/434 (50%), Gaps = 19/434 (4%)
Query: 25 GFVASSTDSEILQH-CKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHG 83
G A ++++++Q CK+G L+QA+ +L+ + P+ + Y L+ C SS
Sbjct: 42 GAGAKISNNQLIQSLCKEGKLKQAIRVLSQESS---PSQQ--TYELLILCCGHRSSLSDA 96
Query: 84 TTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTR 143
+H H L +G D F+ L+ +Y LG + A+ +FD R I W +L A T
Sbjct: 97 LRVHRHILDNGSDQDPFLATKLIGMYSDLGS-VDYARKVFDKTRKRTIYVWNALFRALTL 155
Query: 144 AGRPINSLQLFSQMLDLDMEPNAFTISSVITA--ASK--LRDLALGACLHAMVISRGFHS 199
AG L L+ +M + +E + FT + V+ A AS+ + L G +HA + RG+ S
Sbjct: 156 AGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSS 215
Query: 200 NTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAM 259
+ I + LVDMY R V A +F P +VV W+A+I+ +N EALR F M
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMP-VRNVVSWSAMIACYAKNGKAFEALRTFREM 274
Query: 260 HRGC-GLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCG 318
R P+ T ++L ACA+L L QGK +H ++ G+ + V S+L+ MYG+CG
Sbjct: 275 MRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCG 334
Query: 319 KVGQARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRERGVSDL-YAFGTVLR 374
K+ + VFDR+ D++ VSW +++S+Y + K+ +FE + G S F +VL
Sbjct: 335 KLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLG 394
Query: 375 ACSGVAAVMLGKEVHCQYVRKGGWRDVIVESA-LVDLYAKCGCVDFAQRLFLSMEVR-NQ 432
ACS V GK + R G + I A +VDL + +D A ++ M
Sbjct: 395 ACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGP 454
Query: 433 ITWNAMIGGLAQNG 446
W +++G +G
Sbjct: 455 KVWGSLLGSCRIHG 468
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 179/585 (30%), Positives = 292/585 (49%), Gaps = 43/585 (7%)
Query: 65 VLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTL-YLKLGPHLPQAQTLF 123
VL+ LL K LH + A + +G+ D F + L+ L +L + +
Sbjct: 51 VLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKIL 110
Query: 124 DSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLD---LDMEPNAFTISSVITAASKLR 180
+ +I +W I ++ + P S L+ QML + P+ FT + + LR
Sbjct: 111 KGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLR 170
Query: 181 DLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAII 240
+LG + V+ + + +A + M+ + +A K+FDESP D+V W +I
Sbjct: 171 LSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESP-VRDLVSWNCLI 229
Query: 241 STLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGI 300
+ + +A+ ++ M G+ PD T L+++C+ LG L +GKE + V G+
Sbjct: 230 NGYKKIGEAEKAIYVYKLMESE-GVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGL 288
Query: 301 CGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYC-------------- 346
+ + ++L+DM+ KCG + +AR +FD L + VSWT M+S Y
Sbjct: 289 RMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDD 348
Query: 347 -----------------QNKEYEAVFELVRERGVS----DLYAFGTVLRACSGVAAVMLG 385
Q K + L +E S D L ACS + A+ +G
Sbjct: 349 MEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVG 408
Query: 386 KEVHCQYVRKGGWR-DVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQ 444
+H +Y+ K +V + ++LVD+YAKCG + A +F ++ RN +T+ A+IGGLA
Sbjct: 409 IWIH-RYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLAL 467
Query: 445 NGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVE 504
+G + + F +MI G+ PD ITFIG+L AC H G++ GR YF+ M + + P ++
Sbjct: 468 HGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLK 527
Query: 505 HYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIEL 564
HY+ M+DLLGRA ++EEA+ L+E+ D ++W LL C + E+ A+K++EL
Sbjct: 528 HYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLEL 587
Query: 565 EPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
+P YVLL +Y W DA R++M +RGV+K+PG S I
Sbjct: 588 DPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSI 632
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 282 bits (721), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 171/534 (32%), Positives = 276/534 (51%), Gaps = 15/534 (2%)
Query: 83 GTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYT 142
G +H A+ G S+ +G++++ +Y K + A+ +FD + +D I W ++IS Y
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFW-RVEDARKVFDRMPEKDTILWNTMISGYR 196
Query: 143 RAGRPINSLQLFSQMLDLD-MEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNT 201
+ + S+Q+F +++ + T+ ++ A ++L++L LG +H++ G +S+
Sbjct: 197 KNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD 256
Query: 202 VISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVA-MH 260
+ + + +Y + ++ LF E +P D+V + A+I T N +L LF M
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKP-DIVAYNAMIHGYTSNGETELSLSLFKELML 315
Query: 261 RGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKV 320
G L TL++ G L +H + + V ++L +Y K ++
Sbjct: 316 SGARLRS-----STLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEI 370
Query: 321 GQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDL----YAFGTVLRAC 376
AR +FD +K+ SW AM+S Y QN E L RE S+ +L AC
Sbjct: 371 ESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC 430
Query: 377 SGVAAVMLGKEVHCQYVRKGGWRDVI-VESALVDLYAKCGCVDFAQRLFLSMEVRNQITW 435
+ + A+ LGK VH VR + I V +AL+ +YAKCG + A+RLF M +N++TW
Sbjct: 431 AQLGALSLGKWVH-DLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTW 489
Query: 436 NAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVD 495
N MI G +G+G E L +F +M+ G+ P +TF+ VL+ACSH GLV EG F M+
Sbjct: 490 NTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIH 549
Query: 496 EYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAE 555
YG +P V+HY CM+D+LGRA ++ A +E S+W LLGAC D A
Sbjct: 550 RYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLAR 609
Query: 556 RVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
V+ K+ EL+PD +VLL NI+ A + A +R+ + R + K PG + I
Sbjct: 610 TVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 139/303 (45%), Gaps = 6/303 (1%)
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTR 245
A HA +I GF ++ + + L A+ A +F P DV + ++ +
Sbjct: 37 AQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRP-DVFLFNVLMRGFSV 95
Query: 246 NDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV 305
N+ +L +F + + L P+ T+ ++A + R G+ +H + V G ++
Sbjct: 96 NESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELL 155
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEY----EAVFELVRER 361
+ S+++ MY K +V AR VFDR+ +K+++ W M+S Y +N+ Y + +L+ E
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINES 215
Query: 362 GVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFA 420
D +L A + + + LG ++H + G + V + + LY+KCG +
Sbjct: 216 CTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMG 275
Query: 421 QRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHT 480
LF + + +NAMI G NG L LF++++ G T + ++ H
Sbjct: 276 SALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHL 335
Query: 481 GLV 483
L+
Sbjct: 336 MLI 338
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 282 bits (721), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 185/608 (30%), Positives = 297/608 (48%), Gaps = 56/608 (9%)
Query: 51 LNTSQTTLD------PNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNS 104
L T T+LD PN + LL++C K + G LHA +K+G D F +
Sbjct: 14 LVTGGTSLDVILSHSPN--KFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATA 71
Query: 105 LLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEP 164
L+++Y+K+ + A + D + R I + + +S G ++ ++F
Sbjct: 72 LVSMYMKV-KQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGM 130
Query: 165 NAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLF 224
N+ T++SV+ D+ G LH + + GF + ++LV MY R A ++F
Sbjct: 131 NSVTVASVLGGCG---DIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMF 187
Query: 225 DESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGW 284
++ P + VV + A IS L N + +F M + P+ TF + ACA+L
Sbjct: 188 EKVPH-KSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLN 246
Query: 285 LRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGD-KNSVSWTAMLS 343
L+ G++LH V+ +V ++L+DMY KC A +VF L D +N +SW +++S
Sbjct: 247 LQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVIS 306
Query: 344 AYCQNKEYEAVFELVR----------------------------------ERGVS----- 364
N ++E EL ER +S
Sbjct: 307 GMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVP 366
Query: 365 DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLF 424
L ++L ACS + + GKE+H ++ RD+ V ++L+D+Y KCG +A+R+F
Sbjct: 367 SLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIF 426
Query: 425 LSMEVR--NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGL 482
E + + + WN MI G ++G +E+FE + +E +EP TF VL ACSH G
Sbjct: 427 DRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGN 486
Query: 483 VDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLL 542
V++G + F LM +EYG KP EH CMIDLLGR+ + EA+ +++ + LL
Sbjct: 487 VEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLL 545
Query: 543 GACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKK 602
G+C + D V E A K+ ELEP+ +V+L +IY A+ RW D IR++++ + + K
Sbjct: 546 GSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVK 605
Query: 603 LPGKSWIG 610
LPG S G
Sbjct: 606 LPGLSLSG 613
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 207/449 (46%), Gaps = 49/449 (10%)
Query: 40 KDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDR 99
++G R A + ++ + + V AS+L C G LH A+KSG +
Sbjct: 109 ENGFCRDAFRMFGDARVS-GSGMNSVTVASVLGGCGDIEG---GMQLHCLAMKSGFEMEV 164
Query: 100 FVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLD 159
+VG SL+++Y + G + A+ +F+ + + ++ + + IS G +F+ M
Sbjct: 165 YVGTSLVSMYSRCGEWVLAAR-MFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRK 223
Query: 160 LDME-PNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVR 218
E PN T + ITA + L +L G LH +V+ + F T++ +AL+DMY + R +
Sbjct: 224 FSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWK 283
Query: 219 DALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFG----- 273
A +F E + +++ W ++IS + N A+ LF + GL PD T+
Sbjct: 284 SAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSE-GLKPDSATWNSLISG 342
Query: 274 ------------------------------TLLAACANLGWLRQGKELHAKVVGLGICGN 303
+LL+AC+++ L+ GKE+H V+ +
Sbjct: 343 FSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERD 402
Query: 304 VVVESSLLDMYGKCGKVGQARVVFDRL--GDKNSVSWTAMLSAYCQNKEYEA---VFELV 358
+ V +SL+DMY KCG AR +FDR K+ V W M+S Y ++ E E+ +FEL+
Sbjct: 403 IFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELL 462
Query: 359 RERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVE-SALVDLYAKCGC 416
RE V L F VL ACS V G ++ + G++ ++DL + G
Sbjct: 463 REEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGR 522
Query: 417 VDFAQRLFLSMEVRNQITWNAMIGGLAQN 445
+ A+ + M + +++++G Q+
Sbjct: 523 LREAKEVIDQMSEPSSSVYSSLLGSCRQH 551
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 281 bits (719), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 179/564 (31%), Positives = 296/564 (52%), Gaps = 19/564 (3%)
Query: 70 LLQTCTKTSSFLH-GTTLHAHALK---------SGIHSDRFV-GNSLLTLYLKLGPHLPQ 118
LL C + F H G LHA +K + IH + V NSLL+LY K G L
Sbjct: 50 LLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGK-LVD 108
Query: 119 AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASK 178
A LFD + +RD+I+ + + R + L +ML +A T++ V++
Sbjct: 109 AIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDHA-TLTIVLSVCDT 167
Query: 179 LRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTA 238
+ +HA+ I G+ + + L+ Y + +FD +V+ TA
Sbjct: 168 PEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSH-RNVITLTA 226
Query: 239 IISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGL 298
+IS L N++ + LRLF M RG + P+ T+ + LAAC+ + +G+++HA +
Sbjct: 227 VISGLIENELHEDGLRLFSLMRRGL-VHPNSVTYLSALAACSGSQRIVEGQQIHALLWKY 285
Query: 299 GICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN-KEYEAVFEL 357
GI + +ES+L+DMY KCG + A +F+ + + VS T +L QN E EA+
Sbjct: 286 GIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFF 345
Query: 358 VR--ERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKC 414
+R + GV D VL ++ LGK++H +++ + V + L+++Y+KC
Sbjct: 346 IRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKC 405
Query: 415 GCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVL 474
G + +Q +F M RN ++WN+MI A++G G L+L+E+M ++P +TF+ +L
Sbjct: 406 GDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLL 465
Query: 475 FACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYD 534
ACSH GL+D+GR M + +GI+P EHY C+ID+LGRA +++EA+S +++ + D
Sbjct: 466 HACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPD 525
Query: 535 HSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKL 594
+W LLGAC+ D E A ++ + PD +++L+ NIY + G+W + + K
Sbjct: 526 CKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKR 585
Query: 595 MEDRGVKKLPGKSWIGSENQKGSL 618
M+ GV K G S I E++ S
Sbjct: 586 MKAMGVTKETGISSIEIEHKTHSF 609
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 173/570 (30%), Positives = 290/570 (50%), Gaps = 71/570 (12%)
Query: 116 LPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITA 175
+ A+ +FD + D +AW +++++Y+R G ++ LF+Q+ D +P+ ++ +++++
Sbjct: 20 IASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILST 79
Query: 176 ASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLF-DESPEPEDVV 234
+ L ++ G + ++VI GF ++ ++++L+DMYG+ A K+F D + + V
Sbjct: 80 CASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEV 139
Query: 235 GWTAIISTLTRNDMFREALRLFVAM--------------HRGCG---------------- 264
W +++ + F AL +FV M H CG
Sbjct: 140 TWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESE 199
Query: 265 LVPDGFTFGTLLAAC-ANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGK------- 316
PD +TF +L+ AC A+ + G+ +HA ++ G V ++S+L Y K
Sbjct: 200 FKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDA 259
Query: 317 ---------------------CGKVGQ---ARVVFDRLGDKNSVSWTAMLSAYCQNKEYE 352
C K+G+ A VF +KN V+WT M++ Y +N + E
Sbjct: 260 MRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGE 319
Query: 353 AVF----ELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALV 408
E+++ SD +A+G VL ACSG+A + GK +H + G V +ALV
Sbjct: 320 QALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALV 379
Query: 409 DLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYI 468
+LYAKCG + A R F + ++ ++WN M+ +G + L+L+++MI G++PD +
Sbjct: 380 NLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNV 439
Query: 469 TFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLEN 528
TFIG+L CSH+GLV+EG F MV +Y I V+H CMID+ GR + EA+ L
Sbjct: 440 TFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATT 499
Query: 529 ADC----RYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGR 584
++S W LLGAC+ V++ + EP +S+VLL N+Y + GR
Sbjct: 500 YSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGR 559
Query: 585 WNDAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
W + ++R+ M +RG+KK PG SWI NQ
Sbjct: 560 WKEGEDVRREMVERGMKKTPGCSWIEVGNQ 589
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 127/517 (24%), Positives = 222/517 (42%), Gaps = 90/517 (17%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQ-------- 118
+ ++L TC + G + + ++SG + V NSL+ +Y K L
Sbjct: 73 FTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMC 132
Query: 119 ------------------------AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLF 154
A +F + R AW +IS + G+ + L LF
Sbjct: 133 CDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLF 192
Query: 155 SQMLDLDMEPNAFTISSVITAAS-KLRDLALGACLHAMVISRGFHSNTVISSALVDMY-- 211
+ML+ + +P+ +T SS++ A S ++ G +HA+++ G+ S ++++ Y
Sbjct: 193 KEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTK 252
Query: 212 --GRNRAVRD---------------------------ALKLFDESPEPEDVVGWTAIIST 242
R+ A+R+ AL++F +PE +++V WT +I+
Sbjct: 253 LGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPE-KNIVTWTTMITG 311
Query: 243 LTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICG 302
RN +ALR FV M + G+ D F +G +L AC+ L L GK +H ++ G G
Sbjct: 312 YGRNGDGEQALRFFVEMMKS-GVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQG 370
Query: 303 NVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERG 362
V ++L+++Y KCG + +A F + +K+ VSW ML A+ + + +L
Sbjct: 371 YAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMI 430
Query: 363 VS----DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR---DVIVESALVDLYAKCG 415
S D F +L CS V G + V+ +R +V + ++D++ + G
Sbjct: 431 ASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKD--YRIPLEVDHVTCMIDMFGRGG 488
Query: 416 CVDFAQRLF-----LSMEVRNQITWNAMIGGLAQNGR---GTEVLELFEDMIKEGMEPDY 467
+ A+ L L + N +W ++G + + G EV ++ + I E E
Sbjct: 489 HLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLK--IAEPSEEMS 546
Query: 468 ITFIGVLFACSHTGLVDEGRRYFALMVDEYGIK--PG 502
+ L+ CS TG EG MV E G+K PG
Sbjct: 547 FVLLSNLY-CS-TGRWKEGEDVRREMV-ERGMKKTPG 580
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 156/346 (45%), Gaps = 46/346 (13%)
Query: 38 HCKDGSLRQALHLLNTSQTTLDPNLKPVLY--ASLLQTCTKTSS-FLHGTTLHAHALKSG 94
HC G L L L + L+ KP Y +SL+ C+ SS ++G +HA LK+G
Sbjct: 181 HC--GKLESCLSLF---KEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNG 235
Query: 95 IHSDRFVGNSLLTLYLKLGP------------------------------HLPQAQTLFD 124
S NS+L+ Y KLG +A +F
Sbjct: 236 WSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFH 295
Query: 125 SLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLAL 184
++I+ WT++I+ Y R G +L+ F +M+ ++ + F +V+ A S L L
Sbjct: 296 LAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGH 355
Query: 185 GACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLT 244
G +H +I GF + +ALV++Y + +++A + F + +D+V W ++
Sbjct: 356 GKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIAN-KDLVSWNTMLFAFG 414
Query: 245 RNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVV-GLGICGN 303
+ + +AL+L+ M G+ PD TF LL C++ G + +G + +V I
Sbjct: 415 VHGLADQALKLYDNM-IASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLE 473
Query: 304 VVVESSLLDMYGKCGKVGQAR---VVFDRL--GDKNSVSWTAMLSA 344
V + ++DM+G+ G + +A+ + L N+ SW +L A
Sbjct: 474 VDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGA 519
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 124/271 (45%), Gaps = 40/271 (14%)
Query: 315 GKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQ---NKEYEAVFELVR-ERGVSDLYAFG 370
K G++ AR VFD + + ++V+W ML++Y + ++E A+F +R D Y+F
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 371 TVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSM--E 428
+L C+ + V G+++ +R G + V ++L+D+Y KC A ++F M +
Sbjct: 75 AILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 429 VRNQIT-------------------------------WNAMIGGLAQNGRGTEVLELFED 457
RN++T WN MI G A G+ L LF++
Sbjct: 135 SRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKE 194
Query: 458 MIKEGMEPDYITFIGVLFACS-HTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRA 516
M++ +PD TF ++ ACS + V GR A+M+ G VE N ++ +
Sbjct: 195 MLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKN-GWSSAVEAKNSVLSFYTKL 253
Query: 517 EMIEEAESLLENADCRYDHSLWAVLLGACTK 547
++A LE+ + S W ++ AC K
Sbjct: 254 GSRDDAMRELESIEVLTQVS-WNSIIDACMK 283
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 412 AKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFI 471
AK G + A+++F M + + WN M+ ++ G E + LF + +PD +F
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 472 GVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADC 531
+L C+ G V GR+ +L++ G + N +ID+ G+ A + + C
Sbjct: 75 AILSTCASLGNVKFGRKIQSLVI-RSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCC 133
Query: 532 RYDHSL-WAVLLGACTKCSDYVTAER 556
+ + W LL A Y+ AE+
Sbjct: 134 DSRNEVTWCSLLFA------YMNAEQ 153
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 167/556 (30%), Positives = 297/556 (53%), Gaps = 26/556 (4%)
Query: 69 SLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAV 128
++L C + G +H A+K + + + N+L+ +Y K G + AQ +F
Sbjct: 297 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGC-ITNAQMIFKMNNN 355
Query: 129 RDIIAWTSLISAYTRAGRPINSLQLFSQML--DLDMEPNAFTISSVITAASKLRDLALGA 186
+++++W +++ ++ G + + QML D++ + TI + + L
Sbjct: 356 KNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLK 415
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
LH + + F N ++++A V Y + ++ A ++F + V W A+I ++
Sbjct: 416 ELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVF-HGIRSKTVNSWNALIGGHAQS 474
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
+ R +L + M + GL+PD FT +LL+AC+ L LR GKE+H ++ + ++ V
Sbjct: 475 NDPRLSLDAHLQM-KISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 533
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRER----- 361
S+L +Y CG++ + +FD + DK+ VSW +++ Y QN + + R+
Sbjct: 534 YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGI 593
Query: 362 ---GVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
G+S + FG ACS + ++ LG+E H ++ D + +L+D+YAK G +
Sbjct: 594 QLCGISMMPVFG----ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 649
Query: 419 FAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACS 478
+ ++F ++ ++ +WNAMI G +G E ++LFE+M + G PD +TF+GVL AC+
Sbjct: 650 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 709
Query: 479 HTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEE-----AESLLENADCRY 533
H+GL+ EG RY M +G+KP ++HY C+ID+LGRA +++ AE + E AD
Sbjct: 710 HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADV-- 767
Query: 534 DHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRK 593
+W LL +C + E+VA K+ ELEP+ +YVLL N+Y +G+W D ++R+
Sbjct: 768 --GIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQ 825
Query: 594 LMEDRGVKKLPGKSWI 609
M + ++K G SWI
Sbjct: 826 RMNEMSLRKDAGCSWI 841
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 212/442 (47%), Gaps = 29/442 (6%)
Query: 54 SQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLG 113
S T L P+ Y +++ C S G +H +K+G+ D FVGN+L++ Y G
Sbjct: 179 STTDLLPD--HFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFY---G 233
Query: 114 PH--LPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDME----PNAF 167
H + A LFD + R++++W S+I ++ G S L +M++ + + P+
Sbjct: 234 THGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVA 293
Query: 168 TISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDES 227
T+ +V+ ++ R++ LG +H + V+++AL+DMY + + +A +F +
Sbjct: 294 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF-KM 352
Query: 228 PEPEDVVGWTAIISTLTRN-------DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACA 280
++VV W ++ + D+ R+ L G + D T + C
Sbjct: 353 NNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA------GGEDVKADEVTILNAVPVCF 406
Query: 281 NLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTA 340
+ +L KELH + N +V ++ + Y KCG + A+ VF + K SW A
Sbjct: 407 HESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNA 466
Query: 341 MLSAYCQNKEYEAVFELVRERGVS----DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKG 396
++ + Q+ + + + +S D + ++L ACS + ++ LGKEVH +R
Sbjct: 467 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 526
Query: 397 GWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFE 456
RD+ V +++ LY CG + Q LF +ME ++ ++WN +I G QNG L +F
Sbjct: 527 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 586
Query: 457 DMIKEGMEPDYITFIGVLFACS 478
M+ G++ I+ + V ACS
Sbjct: 587 QMVLYGIQLCGISMMPVFGACS 608
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 171/323 (52%), Gaps = 12/323 (3%)
Query: 172 VITAASKLRDLALGACLHAMVI-SRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEP 230
++ A+ K +D+ +G +H +V S ++ V+ + ++ MY + D+ +FD +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFD-ALRS 148
Query: 231 EDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKE 290
+++ W A+IS+ +RN+++ E L F+ M L+PD FT+ ++ ACA + + G
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 291 LHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKE 350
+H VV G+ +V V ++L+ YG G V A +FD + ++N VSW +M+ + N
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 351 YEAVF----ELVRERG----VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVI 402
E F E++ E G + D+ TVL C+ + LGK VH V+ ++++
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 403 VESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIK-- 460
+ +AL+D+Y+KCGC+ AQ +F +N ++WN M+GG + G ++ M+
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 388
Query: 461 EGMEPDYITFIGVLFACSHTGLV 483
E ++ D +T + + C H +
Sbjct: 389 EDVKADEVTILNAVPVCFHESFL 411
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/498 (33%), Positives = 287/498 (57%), Gaps = 12/498 (2%)
Query: 118 QAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAAS 177
A LFD L RD+ + S +S++ R+G P ++L LF Q+ + ++ T + V+ A S
Sbjct: 36 HADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACS 95
Query: 178 KLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWT 237
L G +HA++I +G + T+ +AL+DMY + + D++++F ES E +D+V W
Sbjct: 96 LLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVF-ESVEEKDLVSWN 154
Query: 238 AIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVG 297
A++S RN +EAL +F AM+R + + FT +++ CA+L L+QGK++HA VV
Sbjct: 155 ALLSGFLRNGKGKEALGVFAAMYRERVEISE-FTLSSVVKTCASLKILQQGKQVHAMVVV 213
Query: 298 LGICGNVVVESSLLDMYGKCGKVGQARVVFDRLG-DKNSVSWTAMLSAYCQNKEYEAVFE 356
G VV+ ++++ Y G + +A V++ L + V +++S +N+ Y+ F
Sbjct: 214 TGR-DLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF- 271
Query: 357 LVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGC 416
L+ R ++ + L CS + + +GK++HC +R G D + + L+D+Y KCG
Sbjct: 272 LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQ 331
Query: 417 VDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKE--GMEPDYITFIGVL 474
+ A+ +F ++ ++ ++W +MI A NG G + LE+F +M +E G+ P+ +TF+ V+
Sbjct: 332 IVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVI 391
Query: 475 FACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEE----AESLLENAD 530
AC+H GLV EG+ F +M ++Y + PG EHY C ID+L +A EE E ++EN +
Sbjct: 392 SACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDN 451
Query: 531 CRYDHSLWAVLLGACTKCSDYVTAERVARKMI-ELEPDFHLSYVLLGNIYRAVGRWNDAM 589
++W +L AC+ D E VAR+++ E P+ YVL+ N Y A+G+W+
Sbjct: 452 QSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVE 511
Query: 590 EIRKLMEDRGVKKLPGKS 607
E+R ++++G+ K G S
Sbjct: 512 ELRGKLKNKGLVKTAGHS 529
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 196/400 (49%), Gaps = 24/400 (6%)
Query: 60 PNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQA 119
P+L + +L C+ S G +HA +K G + +L+ +Y K G HL +
Sbjct: 80 PDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYG-HLVDS 138
Query: 120 QTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKL 179
+F+S+ +D+++W +L+S + R G+ +L +F+ M +E + FT+SSV+ + L
Sbjct: 139 VRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASL 198
Query: 180 RDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAI 239
+ L G +HAMV+ G V+ +A++ Y + +A+K+++ D V ++
Sbjct: 199 KILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSL 257
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG 299
IS RN ++EA F+ M R P+ + LA C++ L GK++H + G
Sbjct: 258 ISGCIRNRNYKEA---FLLMSRQ---RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNG 311
Query: 300 ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVR 359
+ + + L+DMYGKCG++ QAR +F + K+ VSWT+M+ AY N + E+ R
Sbjct: 312 FVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFR 371
Query: 360 E-----RGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVES---ALVDL 410
E GV + F V+ AC+ V GKE C + K +R V +D+
Sbjct: 372 EMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKE--CFGMMKEKYRLVPGTEHYVCFIDI 429
Query: 411 YAKCGCVDFAQRLFLS-MEVRNQ----ITWNAMIGGLAQN 445
+K G + RL ME NQ W A++ + N
Sbjct: 430 LSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLN 469
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/558 (30%), Positives = 293/558 (52%), Gaps = 19/558 (3%)
Query: 65 VLYASLLQTCTKTSSFL--------HGTTLHAHALKSG-IHSDRFVGNSLLTLYLKLGPH 115
+L+ +LL C K FL H T +HA + +G + + + L+ ++G
Sbjct: 9 MLHRTLL--CPKRIKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIG-E 65
Query: 116 LPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITA 175
+ A+ +FD L R + + S+I Y+R P L+L+ QM+ ++P++ T + I A
Sbjct: 66 ISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKA 125
Query: 176 ASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVG 235
L G + + G+ ++ + S+++++Y + + +A LF + + DV+
Sbjct: 126 CLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAK-RDVIC 184
Query: 236 WTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV 295
WT +++ + +A+ + M G D LL A +LG + G+ +H +
Sbjct: 185 WTTMVTGFAQAGKSLKAVEFYREMQNE-GFGRDRVVMLGLLQASGDLGDTKMGRSVHGYL 243
Query: 296 VGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN----KEY 351
G+ NVVVE+SL+DMY K G + A VF R+ K +VSW +++S + QN K +
Sbjct: 244 YRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAF 303
Query: 352 EAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLY 411
EAV E+ DL VL ACS V ++ G+ VHC Y+ K D + +AL+D+Y
Sbjct: 304 EAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHC-YILKRHVLDRVTATALMDMY 362
Query: 412 AKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFI 471
+KCG + ++ +F + ++ + WN MI +G G EV+ LF M + +EPD+ TF
Sbjct: 363 SKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFA 422
Query: 472 GVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADC 531
+L A SH+GLV++G+ +F++M+++Y I+P +HY C+IDLL RA +EEA ++ +
Sbjct: 423 SLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKL 482
Query: 532 RYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEI 591
+W LL C + + A K+++L PD L+ N + +W + ++
Sbjct: 483 DNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKV 542
Query: 592 RKLMEDRGVKKLPGKSWI 609
RKLM + ++K+PG S I
Sbjct: 543 RKLMRNGAMEKVPGYSAI 560
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 186/641 (29%), Positives = 298/641 (46%), Gaps = 112/641 (17%)
Query: 80 FLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLIS 139
FLH H ++KSG N L+ LY K G L +A+ +FD + R++ +W ++I+
Sbjct: 8 FLH----HIRSIKSGSTLTAVSSNQLVNLYSKSGL-LREARNVFDEMLERNVYSWNAVIA 62
Query: 140 AYTRAGRPINSLQLF--------------------------SQMLDL----------DME 163
AY + + +LF S+ +++ D+
Sbjct: 63 AYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIW 122
Query: 164 PNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYG----------- 212
+ FT+++++ ++KL ++ G LH +++ G S+L+ MY
Sbjct: 123 IDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNI 182
Query: 213 ----------------------RNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFR 250
R + AL +F +PE D + W +I+ +N
Sbjct: 183 FNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEE 242
Query: 251 EALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSL 310
EAL++ V+M GL D +FG +L ++L L+ GKE+HA+V+ G N V S +
Sbjct: 243 EALKMAVSMEEN-GLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGI 301
Query: 311 LDMYGKCG-------------------------------KVGQARVVFDRLGDKNSVSWT 339
+D+Y KCG K+ +A+ +FD L +KN V WT
Sbjct: 302 VDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWT 361
Query: 340 AMLSAYCQNKEYEAVFELVR-----ERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVR 394
AM Y ++ ++V EL R E D +VL ACS A + GKE+H +R
Sbjct: 362 AMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLR 421
Query: 395 KGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLEL 454
G D + +A VD+Y+KCG V++A+R+F S R+ + +NAMI G A +G + +
Sbjct: 422 TGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQH 481
Query: 455 FEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLG 514
FEDM + G +PD ITF+ +L AC H GLV EG +YF M++ Y I P HY CMIDL G
Sbjct: 482 FEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYG 541
Query: 515 RAEMIEEAESLLENAD-CRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYV 573
+A +++A L+E D D + L AC+ + + V K++ +E Y+
Sbjct: 542 KAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYI 601
Query: 574 LLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
+ N Y + GRW++ IR M + ++ G SW + Q
Sbjct: 602 QIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQ 642
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 150/325 (46%), Gaps = 36/325 (11%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLG-------PHL--- 116
+ ++L + S G +HA LK+G +S++FV + ++ +Y K G HL
Sbjct: 263 FGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYG 322
Query: 117 --------------------PQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQ 156
+A+ LFDSL+ ++++ WT++ Y +P + L+L
Sbjct: 323 FGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARA 382
Query: 157 MLDLDME-PNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNR 215
+ + P++ + SV+ A S + G +H + G + + +A VDMY +
Sbjct: 383 FIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCG 442
Query: 216 AVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTL 275
V A ++FD S E D V + A+I+ + ++ + F M G G PD TF L
Sbjct: 443 NVEYAERIFDSSFE-RDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEG-GFKPDEITFMAL 500
Query: 276 LAACANLGWLRQG-KELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLG--D 332
L+AC + G + +G K + + I + ++D+YGK ++ +A + + + +
Sbjct: 501 LSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVE 560
Query: 333 KNSVSWTAMLSAYCQNKEYEAVFEL 357
K++V A L+A NK E V E+
Sbjct: 561 KDAVILGAFLNACSWNKNTELVKEV 585
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 106/264 (40%), Gaps = 74/264 (28%)
Query: 285 LRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSA 344
L+ G H + + G V + L+++Y K G + +AR VFD + ++N SW A+++A
Sbjct: 4 LKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAA 63
Query: 345 Y-------------------------------------CQNKEYEAVFELVRERGVS--- 364
Y C+++ E E+ R+
Sbjct: 64 YVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWI 123
Query: 365 DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCG--------- 415
D + T+++ + + V G+++H V+ G S+L+ +Y+KCG
Sbjct: 124 DDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIF 183
Query: 416 ---CVDFAQRL----------------------FLSMEVRNQITWNAMIGGLAQNGRGTE 450
CV+F + + + E+ + I+WN +I G AQNG E
Sbjct: 184 NGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEE 243
Query: 451 VLELFEDMIKEGMEPDYITFIGVL 474
L++ M + G++ D +F VL
Sbjct: 244 ALKMAVSMEENGLKWDEHSFGAVL 267
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 81/164 (49%), Gaps = 4/164 (2%)
Query: 64 PVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLF 123
++ S+L C+ + G +H H+L++GI D+ + + + +Y K G ++ A+ +F
Sbjct: 393 SLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCG-NVEYAERIF 451
Query: 124 DSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLA 183
DS RD + + ++I+ G S Q F M + +P+ T ++++A + R L
Sbjct: 452 DSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSAC-RHRGLV 510
Query: 184 LGA--CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFD 225
L +M+ + T + ++D+YG+ + A++L +
Sbjct: 511 LEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELME 554
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 275 bits (703), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 165/557 (29%), Positives = 302/557 (54%), Gaps = 12/557 (2%)
Query: 62 LKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQT 121
L P LY L+ C+ + +H +++ +G S+ + + L+ LYLK G + A+
Sbjct: 10 LSPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGD-VKHARK 68
Query: 122 LFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRD 181
LFD ++ RD+++WT++IS ++R G ++L LF +M D++ N FT SV+ + L
Sbjct: 69 LFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGC 128
Query: 182 LALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIS 241
L G +H V N ++ SAL+ +Y R + +A FD E D+V W A+I
Sbjct: 129 LKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKE-RDLVSWNAMID 187
Query: 242 TLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGIC 301
T N + LF M G PD FTFG+LL A + L ELH + LG
Sbjct: 188 GYTANACADTSFSLFQLMLTE-GKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFG 246
Query: 302 GNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAY-----CQNKEYEAVFE 356
+ + SL++ Y KCG + A + + ++ +S TA+++ + C + ++ +
Sbjct: 247 RSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKD 306
Query: 357 LVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR-DVIVESALVDLYAKCG 415
++R + D ++L+ C+ +A+V +G+++H ++ R DV + ++L+D+YAK G
Sbjct: 307 MIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSG 366
Query: 416 CVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLF 475
++ A F M+ ++ +W ++I G ++G + ++L+ M E ++P+ +TF+ +L
Sbjct: 367 EIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLS 426
Query: 476 ACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENAD--CRY 533
ACSHTG + G + + M++++GI+ EH +C+ID+L R+ +EEA +L+ + +
Sbjct: 427 ACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSL 486
Query: 534 DHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRK 593
S W L AC + + ++ A +++ +EP ++Y+ L ++Y A G W++A+ RK
Sbjct: 487 SSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRK 546
Query: 594 LMEDRG-VKKLPGKSWI 609
LM++ G K PG S +
Sbjct: 547 LMKESGSCNKAPGYSLV 563
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 278/541 (51%), Gaps = 35/541 (6%)
Query: 89 HALKSGIHSDRFVGNSL----LTLYLKL------GPHLPQAQTLFDSLAVRDIIAWTSLI 138
H L I R V N + ++LY K+ L A LFD + VRD+++W S+I
Sbjct: 45 HLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMI 104
Query: 139 SAYTRAGRPINSLQLFSQMLDLDMEP-----NAFTISSVITAASKLRDLALGACLHAMVI 193
S G +++LF +M + + N S + A +L + M +
Sbjct: 105 SGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERL--------FYQMPV 156
Query: 194 SRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREAL 253
+T +++V Y + V DALKLF + P ++V+ WT +I L +N+ EAL
Sbjct: 157 K-----DTAAWNSMVHGYLQFGKVDDALKLFKQMP-GKNVISWTTMICGLDQNERSGEAL 210
Query: 254 RLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDM 313
LF M R C + F ++ ACAN G ++H ++ LG V +SL+
Sbjct: 211 DLFKNMLRCC-IKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITF 269
Query: 314 YGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYE---AVFE-LVRERGVSDLYAF 369
Y C ++G +R VFD + WTA+LS Y NK++E ++F ++R + + F
Sbjct: 270 YANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTF 329
Query: 370 GTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEV 429
+ L +CS + + GKE+H V+ G D V ++LV +Y+ G V+ A +F+ +
Sbjct: 330 ASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFK 389
Query: 430 RNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRY 489
++ ++WN++I G AQ+GRG +F MI+ EPD ITF G+L ACSH G +++GR+
Sbjct: 390 KSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKL 449
Query: 490 FALMVDEYG-IKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKC 548
F M I ++HY CM+D+LGR ++EAE L+E + + +W LL AC
Sbjct: 450 FYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMH 509
Query: 549 SDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSW 608
SD E+ A + L+ +YVLL NIY + GRW++ ++R M+ G+ K PG SW
Sbjct: 510 SDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSW 569
Query: 609 I 609
+
Sbjct: 570 V 570
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 93/177 (52%), Gaps = 3/177 (1%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
+AS L +C+ + G +H A+K G+ +D FVGNSL+ +Y G ++ A ++F +
Sbjct: 329 FASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSG-NVNDAVSVFIKI 387
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
+ I++W S+I + GR + +F QM+ L+ EP+ T + +++A S L G
Sbjct: 388 FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGR 447
Query: 187 CLHAMVISRGFHSNTVIS--SALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIS 241
L + S H + I + +VD+ GR +++A +L + + + W A++S
Sbjct: 448 KLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLS 504
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 174/556 (31%), Positives = 299/556 (53%), Gaps = 26/556 (4%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDS- 125
+A++L C S G +H+ +K+G V N+L+T+Y + A +F+
Sbjct: 193 FATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQV-VVDACLVFEET 250
Query: 126 -LAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLAL 184
+AVRD + + +I R SL +F +ML+ + P T SV+ + S A+
Sbjct: 251 DVAVRDQVTFNVVIDGLAGFKRD-ESLLVFRKMLEASLRPTDLTFVSVMGSCSCA---AM 306
Query: 185 GACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLT 244
G +H + I G+ T++S+A + MY A K+F ES E +D+V W +IS+
Sbjct: 307 GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVF-ESLEEKDLVTWNTMISSYN 365
Query: 245 RNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNV 304
+ + + A+ ++ MH G+ PD FTFG+LLA +L L + A ++ G+ +
Sbjct: 366 QAKLGKSAMSVYKRMHI-IGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKI 421
Query: 305 VVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNK-EYEAV--FELVRE- 360
+ ++L+ Y K G++ +A ++F+R KN +SW A++S + N +E + F + E
Sbjct: 422 EISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLES 481
Query: 361 --RGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
R + D Y T+L C +++MLG + H +R G +++ ++ +AL+++Y++CG +
Sbjct: 482 EVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQ 541
Query: 419 FAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEG-MEPDYITFIGVLFAC 477
+ +F M ++ ++WN++I +++G G + ++ M EG + PD TF VL AC
Sbjct: 542 NSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSAC 601
Query: 478 SHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENAD----CRY 533
SH GLV+EG F MV+ +G+ V+H++C++DLLGRA ++EAESL++ ++ R
Sbjct: 602 SHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRV 661
Query: 534 DHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRK 593
D +W L AC D + VA+ ++E E D YV L NIY G W +A E R+
Sbjct: 662 D--VWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRR 719
Query: 594 LMEDRGVKKLPGKSWI 609
+ G K G SW+
Sbjct: 720 AINMIGAMKQRGCSWM 735
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 217/483 (44%), Gaps = 55/483 (11%)
Query: 40 KDGSLRQALHLLNTSQ--TTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHS 97
+ G R AL L TTL P+ V A + T + G +H +A++SG+
Sbjct: 33 RSGENRNALKLFADVHRCTTLRPDQYSVSLA--ITTARHLRDTIFGGQVHCYAIRSGLLC 90
Query: 98 DRFVGNSLLTLYLKLG--------------PHLPQAQTL----------------FDSLA 127
V N+LL+LY +LG P + TL FD +
Sbjct: 91 HSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMP 150
Query: 128 VRDIIA-WTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
RD +A W ++I+ +G S++LF +M L + + F +++++ L G
Sbjct: 151 ERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCD-YGSLDFGK 209
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESP-EPEDVVGWTAIISTLT- 244
+H++VI GF + + +AL+ MY + V DA +F+E+ D V + +I L
Sbjct: 210 QVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAG 269
Query: 245 -RNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGN 303
+ D E+L +F M L P TF +++ +C+ G ++H + G
Sbjct: 270 FKRD---ESLLVFRKMLEA-SLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKY 322
Query: 304 VVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQ---NKEYEAVFELVRE 360
+V ++ + MY G A VF+ L +K+ V+W M+S+Y Q K +V++ +
Sbjct: 323 TLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHI 382
Query: 361 RGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDF 419
GV D + FG++L + + + V ++ G + + +AL+ Y+K G ++
Sbjct: 383 IGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEISNALISAYSKNGQIEK 439
Query: 420 AQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGME--PDYITFIGVLFAC 477
A LF +N I+WNA+I G NG E LE F +++ + PD T +L C
Sbjct: 440 ADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSIC 499
Query: 478 SHT 480
T
Sbjct: 500 VST 502
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 199/430 (46%), Gaps = 48/430 (11%)
Query: 138 ISAYTRAGRPINSLQLFSQMLD-LDMEPNAFTISSVITAASKLRDLALGACLHAMVISRG 196
++ TR+G N+L+LF+ + + P+ +++S IT A LRD G +H I G
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 197 FHSNTVISSALVDMYGRNRAVRDALKLFDESPEP-------------------------- 230
++ +S+ L+ +Y R + K FDE EP
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 231 -----EDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWL 285
+DV W A+I+ + ++ LF MH+ G+ D F F T+L+ C + G L
Sbjct: 148 KMPERDDVAIWNAMITGCKESGYHETSVELFREMHK-LGVRHDKFGFATILSMC-DYGSL 205
Query: 286 RQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDR--LGDKNSVSWTAMLS 343
GK++H+ V+ G V ++L+ MY C V A +VF+ + ++ V++ ++
Sbjct: 206 DFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVID 265
Query: 344 AYCQNKEYEA--VFELVRERGV--SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR 399
K E+ VF + E + +DL F +V+ +CS A +G +VH ++ G +
Sbjct: 266 GLAGFKRDESLLVFRKMLEASLRPTDL-TFVSVMGSCSCAA---MGHQVHGLAIKTGYEK 321
Query: 400 DVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMI 459
+V +A + +Y+ A ++F S+E ++ +TWN MI Q G + +++ M
Sbjct: 322 YTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMH 381
Query: 460 KEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMI 519
G++PD TF G L A T L + + ++G+ +E N +I + I
Sbjct: 382 IIGVKPDEFTF-GSLLA---TSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQI 437
Query: 520 EEAESLLENA 529
E+A+ L E +
Sbjct: 438 EKADLLFERS 447
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 163/372 (43%), Gaps = 55/372 (14%)
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG 299
++ LTR+ R AL+LF +HR L PD ++ + +L G ++H + G
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 300 ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAY-------------- 345
+ + V ++LL +Y + G + + FD + + + SWT +LSA
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 346 -----------------CQNKEY-EAVFELVRER---GV-SDLYAFGTVLRACSGVAAVM 383
C+ Y E EL RE GV D + F T+L C ++
Sbjct: 148 KMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCD-YGSLD 206
Query: 384 LGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLF--LSMEVRNQITWNAMIGG 441
GK+VH ++ G + V +AL+ +Y C V A +F + VR+Q+T+N +I G
Sbjct: 207 FGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDG 266
Query: 442 LAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKP 501
LA R E L +F M++ + P +TF+ V+ +CS + G + L IK
Sbjct: 267 LAGFKRD-ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM---GHQVHGL-----AIKT 317
Query: 502 GVEHY----NCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERV 557
G E Y N + + E A + E+ + + D W ++ + + +A V
Sbjct: 318 GYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEK-DLVTWNTMISSYNQAKLGKSAMSV 376
Query: 558 ARKM--IELEPD 567
++M I ++PD
Sbjct: 377 YKRMHIIGVKPD 388
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/458 (34%), Positives = 251/458 (54%), Gaps = 15/458 (3%)
Query: 168 TISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDES 227
T + ++ S+ + A LH + + GF S+T + LV Y + + + A KLFDE
Sbjct: 31 TKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEM 90
Query: 228 PEPEDVVGWTAIISTLTRNDMFR--EALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWL 285
EP +VV WT++IS NDM + AL +F MH + P+ +TF ++ AC+ L
Sbjct: 91 CEP-NVVSWTSVISGY--NDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAES 147
Query: 286 RQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRL--GDKNSVSWTAMLS 343
R GK +HA++ G+ N+VV SSL+DMYGKC V AR VFD + +N VSWT+M++
Sbjct: 148 RIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMIT 207
Query: 344 AYCQNKEYEAVFELVRERGVS------DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGG 397
AY QN EL R + + + +V+ ACS + + GK H R G
Sbjct: 208 AYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGY 267
Query: 398 WRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFED 457
+ +V ++L+D+YAKCG + A+++FL + + I++ +MI A++G G ++LF++
Sbjct: 268 ESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDE 327
Query: 458 MIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAE 517
M+ + P+Y+T +GVL ACSH+GLV+EG Y +LM ++YG+ P HY C++D+LGR
Sbjct: 328 MVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFG 387
Query: 518 MIEEAESLLENADCRYDHS--LWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLL 575
++EA L + + + LW LL A ++++I+ +Y+ L
Sbjct: 388 RVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIAL 447
Query: 576 GNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSEN 613
N Y G W D+ +R M+ G K SWI +++
Sbjct: 448 SNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKD 485
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/413 (32%), Positives = 209/413 (50%), Gaps = 22/413 (5%)
Query: 68 ASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLA 127
A L+ +++++ LH LK G SD F N L+ Y+KL + A+ LFD +
Sbjct: 33 AFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKL-KEINTARKLFDEMC 91
Query: 128 VRDIIAWTSLISAYTRAGRPINSLQLFSQML-DLDMEPNAFTISSVITAASKLRDLALGA 186
++++WTS+IS Y G+P N+L +F +M D + PN +T +SV A S L + +G
Sbjct: 92 EPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGK 151
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDES-PEPEDVVGWTAIISTLTR 245
+HA + G N V+SS+LVDMYG+ V A ++FD +VV WT++I+ +
Sbjct: 152 NIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQ 211
Query: 246 NDMFREALRLFVAMHRGCGLVPD---GFTFGTLLAACANLGWLRQGKELHAKVVGLGICG 302
N EA+ LF + + L D F ++++AC++LG L+ GK H V G
Sbjct: 212 NARGHEAIELFRSFN--AALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYES 269
Query: 303 NVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRE-- 360
N VV +SLLDMY KCG + A +F R+ + +S+T+M+ A ++ EA +L E
Sbjct: 270 NTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMV 329
Query: 361 --RGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVES----ALVDLYAKC 414
R + VL ACS V G E K G V+ +S +VD+ +
Sbjct: 330 AGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYG---VVPDSRHYTCVVDMLGRF 386
Query: 415 GCVDFAQRLFLSMEV---RNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGME 464
G VD A L ++EV + + W A++ +GR V E + +I+ +
Sbjct: 387 GRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQ 439
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 160/311 (51%), Gaps = 19/311 (6%)
Query: 43 SLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVG 102
S+ Q +H + PN +AS+ + C+ + G +HA SG+ + V
Sbjct: 116 SMFQKMH----EDRPVPPN--EYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVS 169
Query: 103 NSLLTLYLKLGPHLPQAQTLFDSLA--VRDIIAWTSLISAYTRAGRPINSLQLFSQM--- 157
+SL+ +Y K + A+ +FDS+ R++++WTS+I+AY + R +++LF
Sbjct: 170 SSLVDMYGKCND-VETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAA 228
Query: 158 LDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAV 217
L D N F ++SVI+A S L L G H +V G+ SNTV++++L+DMY + ++
Sbjct: 229 LTSD-RANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSL 287
Query: 218 RDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLA 277
A K+F V+ +T++I ++ + A++LF M G + P+ T +L
Sbjct: 288 SCAEKIFLR-IRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAG-RINPNYVTLLGVLH 345
Query: 278 ACANLGWLRQGKE-LHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRL---GDK 333
AC++ G + +G E L G+ + + ++DM G+ G+V +A + + ++
Sbjct: 346 ACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQ 405
Query: 334 NSVSWTAMLSA 344
++ W A+LSA
Sbjct: 406 GALLWGALLSA 416
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 27/227 (11%)
Query: 30 STDSEILQHCKDGSLRQALHLLNTSQTTLDPN-LKPVLYASLLQTCTKTSSFLHGTTLHA 88
S S I + ++ +A+ L + L + + AS++ C+ G H
Sbjct: 201 SWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHG 260
Query: 89 HALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPI 148
+ G S+ V SLL +Y K G L A+ +F + +I++TS+I A + G
Sbjct: 261 LVTRGGYESNTVVATSLLDMYAKCGS-LSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGE 319
Query: 149 NSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVIS---- 204
+++LF +M+ + PN T+ V L AC H+ +++ G ++++
Sbjct: 320 AAVKLFDEMVAGRINPNYVTLLGV-----------LHACSHSGLVNEGLEYLSLMAEKYG 368
Query: 205 --------SALVDMYGRNRAVRDALKLFD--ESPEPEDVVGWTAIIS 241
+ +VDM GR V +A +L E + + W A++S
Sbjct: 369 VVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLS 415
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 190/654 (29%), Positives = 316/654 (48%), Gaps = 109/654 (16%)
Query: 67 YASLLQTCT--KTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFD 124
YA+ L+ C + +S +H + + G + N L+ +Y K L A+ LFD
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCK-SSELNYARQLFD 73
Query: 125 SLAVRDIIAWTSLISAYTRAGR-----------PI----------------------NSL 151
++ D IA T+++S Y +G P+ +++
Sbjct: 74 EISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAI 133
Query: 152 QLFSQMLDLDMEPNAFTISSVITAASKLRDLALGAC-LHAMVISRGFHSNTVISSALVDM 210
LF +M +P+ FT +SV+ + + D HA + G T +S+ALV +
Sbjct: 134 NLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSV 193
Query: 211 YGRNRA----VRDALKLFDESPEPED-------------------------------VVG 235
Y + + + A K+FDE E ++ +V
Sbjct: 194 YSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVA 253
Query: 236 WTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV 295
+ A+IS ++EAL + M G+ D FT+ +++ ACA G L+ GK++HA V
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRM-VSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Query: 296 VGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNK---EYE 352
+ + ++SL+ +Y KCGK +AR +F+++ K+ VSW A+LS Y + E +
Sbjct: 313 LRREDF-SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAK 371
Query: 353 AVFELVRERGV-------SDL-------------------------YAFGTVLRACSGVA 380
+F+ ++E+ + S L YAF +++C+ +
Sbjct: 372 LIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLG 431
Query: 381 AVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIG 440
A G++ H Q ++ G + +AL+ +YAKCG V+ A+++F +M + ++WNA+I
Sbjct: 432 AYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIA 491
Query: 441 GLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIK 500
L Q+G G E ++++E+M+K+G+ PD IT + VL ACSH GLVD+GR+YF M Y I
Sbjct: 492 ALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP 551
Query: 501 PGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARK 560
PG +HY +IDLL R+ +AES++E+ + +W LL C + A K
Sbjct: 552 PGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADK 611
Query: 561 MIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
+ L P+ +Y+LL N++ A G+W + +RKLM DRGVKK SWI E Q
Sbjct: 612 LFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQ 665
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 134/522 (25%), Positives = 218/522 (41%), Gaps = 121/522 (23%)
Query: 162 MEPNAFTISSVITA-ASKLR--------DLALGACLHAMVISRGFHSNTVISSALVDMYG 212
M+PN + ++ A+ LR L L +H +I+ GF I + L+D+Y
Sbjct: 1 MQPNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYC 60
Query: 213 RNRAVRDALKLFDESPEPE--------------------------------DVVGWTAII 240
++ + A +LFDE EP+ D V + A+I
Sbjct: 61 KSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMI 120
Query: 241 STLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLG-WLRQGKELHAKVVGLG 299
+ + N+ A+ LF M G PD FTF ++LA A + +Q + HA + G
Sbjct: 121 TGFSHNNDGYSAINLFCKMKHE-GFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSG 179
Query: 300 ICGNVVVESSLLDMYGKCGK----VGQARVVFDRLGDKNSVSWTAMLSAYCQNKE----- 350
V ++L+ +Y KC + AR VFD + +K+ SWT M++ Y +N
Sbjct: 180 AGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGE 239
Query: 351 ---------------------------YEAVFELVRERGVS-----DLYAFGTVLRACSG 378
Y+ E+VR R VS D + + +V+RAC+
Sbjct: 240 ELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVR-RMVSSGIELDEFTYPSVIRACAT 298
Query: 379 VAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNA- 437
+ LGK+VH +R+ + +++LV LY KCG D A+ +F M ++ ++WNA
Sbjct: 299 AGLLQLGKQVHAYVLRREDF-SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNAL 357
Query: 438 ------------------------------MIGGLAQNGRGTEVLELFEDMIKEGMEPDY 467
MI GLA+NG G E L+LF M +EG EP
Sbjct: 358 LSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCD 417
Query: 468 ITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLE 527
F G + +C+ G G++Y A ++ + G + N +I + + ++EEA +
Sbjct: 418 YAFSGAIKSCAVLGAYCNGQQYHAQLL-KIGFDSSLSAGNALITMYAKCGVVEEARQVFR 476
Query: 528 NADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIE--LEPD 567
C D W L+ A + A V +M++ + PD
Sbjct: 477 TMPC-LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPD 517
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 172/591 (29%), Positives = 296/591 (50%), Gaps = 43/591 (7%)
Query: 57 TLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLL--TLYLKLGP 114
TL P + ++L+ + S H LHAH L++ I+ NS L
Sbjct: 2 TLPPPIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKL---NSFLFNLSVSSSSI 58
Query: 115 HLPQAQTLFDSL-AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVI 173
+L A +F S+ + + I + + +R+ P ++ + ++ + + F+ ++
Sbjct: 59 NLSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPIL 118
Query: 174 TAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDV 233
A SK+ L G LH + + + + +DMY + A +FDE DV
Sbjct: 119 KAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSH-RDV 177
Query: 234 VGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHA 293
V W +I R + EA +LF M + ++PD +++AC G +R + ++
Sbjct: 178 VTWNTMIERYCRFGLVDEAFKLFEEM-KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYE 236
Query: 294 KVV-------------------GLGICG------------NVVVESSLLDMYGKCGKVGQ 322
++ G G N+ V ++++ Y KCG++
Sbjct: 237 FLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDD 296
Query: 323 ARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRERGVS-DLYAFGTVLRACSG 378
A+V+FD+ K+ V WT M+SAY ++ +E VFE + G+ D+ + +V+ AC+
Sbjct: 297 AQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACAN 356
Query: 379 VAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAM 438
+ + K VH G ++ + +AL+++YAKCG +D + +F M RN ++W++M
Sbjct: 357 LGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSM 416
Query: 439 IGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYG 498
I L+ +G ++ L LF M +E +EP+ +TF+GVL+ CSH+GLV+EG++ FA M DEY
Sbjct: 417 INALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYN 476
Query: 499 IKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVA 558
I P +EHY CM+DL GRA ++ EA ++E+ + +W L+ AC + + A
Sbjct: 477 ITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAA 536
Query: 559 RKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
++++ELEPD + VL+ NIY RW D IR++ME++ V K G S I
Sbjct: 537 KRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRI 587
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 157/541 (29%), Positives = 285/541 (52%), Gaps = 8/541 (1%)
Query: 71 LQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRD 130
Q C+ + G LH A+K+G+ S +FV +S+ + Y K G + +A F L D
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSG-NPSEAYLSFRELGDED 295
Query: 131 IIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHA 190
+ +WTS+I++ R+G S +F +M + M P+ IS +I K+ + G H
Sbjct: 296 MFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHG 355
Query: 191 MVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFR 250
VI F ++ + ++L+ MY + + A KLF E + W ++ +
Sbjct: 356 FVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHV 415
Query: 251 EALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSL 310
+ + LF + + G+ D + +++++C+++G + GK LH VV + + V +SL
Sbjct: 416 KCIELFRKI-QNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSL 474
Query: 311 LDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYE---AVFE-LVRERGVSDL 366
+D+YGK G + A +F D N ++W AM+++Y ++ E A+F+ +V E
Sbjct: 475 IDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSS 533
Query: 367 YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLS 426
T+L AC ++ G+ +H ++ + +AL+D+YAKCG ++ ++ LF +
Sbjct: 534 ITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDA 593
Query: 427 MEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEG 486
++ + WN MI G +G + LF+ M + ++P TF+ +L AC+H GLV++G
Sbjct: 594 GNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQG 653
Query: 487 RRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACT 546
++ F L + +Y +KP ++HY+C++DLL R+ +EEAES + + D +W LL +C
Sbjct: 654 KKLF-LKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCM 712
Query: 547 KCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGK 606
++ R+A + + +P Y++L N+Y A G+W +A R++M + GV K G
Sbjct: 713 THGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGH 772
Query: 607 S 607
S
Sbjct: 773 S 773
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 134/481 (27%), Positives = 225/481 (46%), Gaps = 15/481 (3%)
Query: 91 LKSGIHSDRFVGNSLLTLYLKLG-PHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPIN 149
+ G+ + FV + L++ Y G P+L + +F + RDI W S+I A+ G
Sbjct: 51 ITGGLSENIFVASKLISSYASYGKPNL--SSRVFHLVTRRDIFLWNSIIKAHFSNGDYAR 108
Query: 150 SLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISR-GFHSNTVISSALV 208
SL F ML P+ FT V++A ++L +G +H +V+ GF NT + ++ V
Sbjct: 109 SLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFV 168
Query: 209 DMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLV-- 266
Y + ++DA +FDE P+ DVV WTAIIS +N L MH V
Sbjct: 169 YFYSKCGFLQDACLVFDEMPD-RDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDK 227
Query: 267 PDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVV 326
P+ T AC+NLG L++G+ LH V G+ + V+SS+ Y K G +A +
Sbjct: 228 PNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLS 287
Query: 327 FDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVML-- 384
F LGD++ SWT+++++ ++ + E F++ E ++ G V+ M+
Sbjct: 288 FRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLV 347
Query: 385 --GKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSM-EVRNQITWNAMIGG 441
GK H +R D V ++L+ +Y K + A++LF + E N+ WN M+ G
Sbjct: 348 PQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKG 407
Query: 442 LAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKP 501
+ + +ELF + G+E D + V+ +CSH G V G+ +V + +
Sbjct: 408 YGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVV-KTSLDL 466
Query: 502 GVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKM 561
+ N +IDL G+ + A + AD W ++ + C A + +M
Sbjct: 467 TISVVNSLIDLYGKMGDLTVAWRMFCEADTNV--ITWNAMIASYVHCEQSEKAIALFDRM 524
Query: 562 I 562
+
Sbjct: 525 V 525
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 188/389 (48%), Gaps = 10/389 (2%)
Query: 65 VLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFD 124
V+ + L+ K G H ++ D V NSLL++Y K L A+ LF
Sbjct: 332 VVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKF-ELLSVAEKLFC 390
Query: 125 SLAVR-DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLA 183
++ + AW +++ Y + + ++LF ++ +L +E ++ + +SVI++ S + +
Sbjct: 391 RISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVL 450
Query: 184 LGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTL 243
LG LH V+ + ++L+D+YG+ + A ++F E+ +V+ W A+I++
Sbjct: 451 LGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEA--DTNVITWNAMIASY 508
Query: 244 TRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGN 303
+ +A+ LF M P T TLL AC N G L +G+ +H + N
Sbjct: 509 VHCEQSEKAIALFDRMVSE-NFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMN 567
Query: 304 VVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGV 363
+ + ++L+DMY KCG + ++R +FD K++V W M+S Y + + E+ L +
Sbjct: 568 LSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEE 627
Query: 364 SDLYAFG----TVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDF 419
SD+ G +L AC+ V GK++ + + ++ S LVDL ++ G ++
Sbjct: 628 SDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEE 687
Query: 420 AQRLFLSMEVR-NQITWNAMIGGLAQNGR 447
A+ +SM + + W ++ +G
Sbjct: 688 AESTVMSMPFSPDGVIWGTLLSSCMTHGE 716
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 171/385 (44%), Gaps = 13/385 (3%)
Query: 189 HAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDM 248
+A++I+ G N ++S L+ Y + ++F D+ W +II N
Sbjct: 47 NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTR-RDIFLWNSIIKAHFSNGD 105
Query: 249 FREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG-ICGNVVVE 307
+ +L F +M G PD FT +++ACA L W G +H V+ G N V
Sbjct: 106 YARSLCFFFSMLLS-GQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVG 164
Query: 308 SSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELV--RERGVSD 365
+S + Y KCG + A +VFD + D++ V+WTA++S + QN E E + SD
Sbjct: 165 ASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSD 224
Query: 366 L-----YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFA 420
+ +ACS + A+ G+ +H V+ G V+S++ Y+K G A
Sbjct: 225 VDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEA 284
Query: 421 QRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHT 480
F + + +W ++I LA++G E ++F +M +GM PD + ++
Sbjct: 285 YLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKM 344
Query: 481 GLVDEGRRYFALMVDE-YGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWA 539
LV +G+ + ++ + + V N ++ + + E++ AE L + W
Sbjct: 345 MLVPQGKAFHGFVIRHCFSLDSTV--CNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWN 402
Query: 540 VLLGACTKCSDYVTAERVARKMIEL 564
+L K +V + RK+ L
Sbjct: 403 TMLKGYGKMKCHVKCIELFRKIQNL 427
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 145/298 (48%), Gaps = 5/298 (1%)
Query: 69 SLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAV 128
S++ +C+ + L G +LH + +K+ + V NSL+ LY K+G L A +F A
Sbjct: 438 SVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGD-LTVAWRMFCE-AD 495
Query: 129 RDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACL 188
++I W ++I++Y + ++ LF +M+ + +P++ T+ +++ A L G +
Sbjct: 496 TNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMI 555
Query: 189 HAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDM 248
H + N +S+AL+DMY + + + +LFD + +D V W +IS +
Sbjct: 556 HRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQ-KDAVCWNVMISGYGMHGD 614
Query: 249 FREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVES 308
A+ LF M + P G TF LL+AC + G + QGK+L K+ + N+ S
Sbjct: 615 VESAIALFDQMEES-DVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYS 673
Query: 309 SLLDMYGKCGKVGQAR-VVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSD 365
L+D+ + G + +A V + V W +LS+ + E+E + SD
Sbjct: 674 CLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASD 731
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 177/595 (29%), Positives = 307/595 (51%), Gaps = 37/595 (6%)
Query: 40 KDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGI--HS 97
+ G +R+A+ L ++ L YA+L Q C + + L G LH H L
Sbjct: 38 RSGDIRRAVSLFYSAPVELQSQQA---YAALFQACAEQRNLLDGINLHHHMLSHPYCYSQ 94
Query: 98 DRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQM 157
+ + N L+ +Y K G ++ A+ +FD++ R++++WT+LI+ Y +AG LFS M
Sbjct: 95 NVILANFLINMYAKCG-NILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 158 LDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGR---N 214
L PN FT+SSV+T+ G +H + + G H + +++A++ MYGR
Sbjct: 154 LS-HCFPNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDG 208
Query: 215 RAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGT 274
A +A +F E+ + +++V W ++I+ ++ ++A+ +F+ MH G+ GF T
Sbjct: 209 AAAYEAWTVF-EAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSD-GV---GFDRAT 263
Query: 275 LLAACANL---------GWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKC--GKVGQA 323
LL C++L + +LH+ V G+ V ++L+ +Y +
Sbjct: 264 LLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCY 323
Query: 324 RVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVF---ELVRERGVSDLYAFGTVLRACSGVA 380
++ + ++ V+W +++A+ A+ +L +E+ D Y F +VL+AC+G+
Sbjct: 324 KLFMEMSHCRDIVAWNGIITAFAVYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLV 383
Query: 381 AVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIG 440
+H Q ++ G D ++ ++L+ YAKCG +D R+F M+ R+ ++WN+M+
Sbjct: 384 TARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLK 443
Query: 441 GLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIK 500
+ +G+ +L +F+ M + PD TFI +L ACSH G V+EG R F M ++
Sbjct: 444 AYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETL 500
Query: 501 PGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARK 560
P + HY C+ID+L RAE EAE +++ D +W LLG+C K + + A K
Sbjct: 501 PQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADK 560
Query: 561 MIEL-EPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
+ EL EP +SY+ + NIY A G +N+A K ME V+K P SW N+
Sbjct: 561 LKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNK 615
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 171/585 (29%), Positives = 308/585 (52%), Gaps = 17/585 (2%)
Query: 33 SEILQHC-KDGSLRQALHLLNTSQTTLDPNLKP--VLYASLLQTCTKTSSFLHGTTLHAH 89
S ++ C ++G + +AL + + +D ++P V S+++ C + ++H
Sbjct: 171 STLVSSCLENGEVVKALRMF---KCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQ 227
Query: 90 ALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPIN 149
+ D + NSLLT+Y K G L ++ +F+ +A ++ ++WT++IS+Y R
Sbjct: 228 ITRKMFDLDETLCNSLLTMYSKCGD-LLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEK 286
Query: 150 SLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSN-TVISSALV 208
+L+ FS+M+ +EPN T+ SV+++ + + G +H + R N +S ALV
Sbjct: 287 ALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALV 346
Query: 209 DMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPD 268
++Y + D + + ++V W ++IS M +AL LF M + PD
Sbjct: 347 ELYAECGKLSDCETVLRVVSD-RNIVAWNSLISLYAHRGMVIQALGLFRQMVTQ-RIKPD 404
Query: 269 GFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFD 328
FT + ++AC N G + GK++H V+ + + V++SL+DMY K G V A VF+
Sbjct: 405 AFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTVFN 463
Query: 329 RLGDKNSVSWTAMLSAYCQNK---EYEAVFELVRERGVS-DLYAFGTVLRACSGVAAVML 384
++ ++ V+W +ML + QN E ++F+ + + + F V++ACS + ++
Sbjct: 464 QIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEK 523
Query: 385 GKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQ 444
GK VH + + G +D+ ++AL+D+YAKCG ++ A+ +F +M R+ ++W++MI
Sbjct: 524 GKWVHHKLI-ISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGM 582
Query: 445 NGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVE 504
+GR + F M++ G +P+ + F+ VL AC H+G V+EG+ YF LM +G+ P E
Sbjct: 583 HGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSE 641
Query: 505 HYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIEL 564
H+ C IDLL R+ ++EA ++ D S+W L+ C + + + ++
Sbjct: 642 HFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDI 701
Query: 565 EPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
D Y LL NIY G W + +R M+ +KK+PG S I
Sbjct: 702 VTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAI 746
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 244/440 (55%), Gaps = 13/440 (2%)
Query: 54 SQTTLDPNLKPVLYASLLQTCTKTSSFLH-GTTLHAHALKSGIHSDRFVGNSLLTLYLKL 112
S+TT + ++ S+L+ C + L G +H +K G+ D + SLL +Y +
Sbjct: 93 SETT---QISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQT 149
Query: 113 GPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSV 172
G +L A+ +FD + VRD++AW++L+S+ G + +L++F M+D +EP+A T+ SV
Sbjct: 150 G-NLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISV 208
Query: 173 ITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPED 232
+ ++L L + +H + + F + + ++L+ MY + + + ++F E ++
Sbjct: 209 VEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIF-EKIAKKN 267
Query: 233 VVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELH 292
V WTA+IS+ R + +ALR F M + G+ P+ T ++L++C +G +R+GK +H
Sbjct: 268 AVSWTAMISSYNRGEFSEKALRSFSEMIKS-GIEPNLVTLYSVLSSCGLIGLIREGKSVH 326
Query: 293 AKVVGLGICGNVVVES-SLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNK-- 349
V + N S +L+++Y +CGK+ V + D+N V+W +++S Y
Sbjct: 327 GFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMV 386
Query: 350 -EYEAVF-ELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESAL 407
+ +F ++V +R D + + + AC V LGK++H +R D V+++L
Sbjct: 387 IQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRT-DVSDEFVQNSL 445
Query: 408 VDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDY 467
+D+Y+K G VD A +F ++ R+ +TWN+M+ G +QNG E + LF+ M +E +
Sbjct: 446 IDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNE 505
Query: 468 ITFIGVLFACSHTGLVDEGR 487
+TF+ V+ ACS G +++G+
Sbjct: 506 VTFLAVIQACSSIGSLEKGK 525
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 137/293 (46%), Gaps = 42/293 (14%)
Query: 275 LLAACANLGWLRQGKELHAKVVGLG-ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK 333
L +C++L + Q LHA ++ G + + + + L++ Y G +R+VF+
Sbjct: 7 LFRSCSSLRLVSQ---LHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 63
Query: 334 NSVSWTAML--SAYCQ--NKEYEAVFELVRERGVSDLYAFGTVLRACSGVAA-VMLGKEV 388
+S + ++ + +C + + LV E + F +VLRAC+G + +G +V
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKV 123
Query: 389 HCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRG 448
H + ++ G D ++E++L+ +Y + G + A+++F M VR+ + W+ ++ +NG
Sbjct: 124 HGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEV 183
Query: 449 TEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNC 508
+ L +F+ M+ +G+EPD +T I V+ C+ G + R + +
Sbjct: 184 VKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRK------------ 231
Query: 509 MIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKM 561
M DL D +L LL +KC D +++ER+ K+
Sbjct: 232 MFDL---------------------DETLCNSLLTMYSKCGDLLSSERIFEKI 263
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 175/582 (30%), Positives = 289/582 (49%), Gaps = 46/582 (7%)
Query: 65 VLY--ASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTL 122
VLY ASLL TC + F+ G LHAH + SG+ D + L+T Y L +AQT+
Sbjct: 82 VLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNL-LDEAQTI 140
Query: 123 FDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDL 182
++ + + W LI +Y R R S+ ++ +M+ + + FT SVI A + L D
Sbjct: 141 TENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDF 200
Query: 183 ALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIST 242
A G +H + N + +AL+ MY R V A +LFD E D V W AII+
Sbjct: 201 AYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSE-RDAVSWNAIINC 259
Query: 243 LTRNDMFREALRLFVAMH----------------------------------RGCGLVPD 268
T + EA +L M+ R C +
Sbjct: 260 YTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIG 319
Query: 269 GFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV--VESSLLDMYGKCGKVGQARVV 326
L AC+++G L+ GK H V+ + + V +SL+ MY +C + A +V
Sbjct: 320 SVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIV 379
Query: 327 FDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLY----AFGTVLRACSGVAAV 382
F ++ + +W +++S + N+ E L++E +S + ++L + V +
Sbjct: 380 FQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNL 439
Query: 383 MLGKEVHCQYVRKGGWRD-VIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGG 441
GKE HC +R+ ++D +I+ ++LVD+YAK G + A+R+F SM R+++T+ ++I G
Sbjct: 440 QHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDG 499
Query: 442 LAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKP 501
+ G+G L F+DM + G++PD++T + VL ACSH+ LV EG F M +GI+
Sbjct: 500 YGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRL 559
Query: 502 GVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARK- 560
+EHY+CM+DL RA +++A + ++ A LL AC + E A K
Sbjct: 560 RLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKL 619
Query: 561 MIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKK 602
++E +P+ Y+LL ++Y G W+ + ++ L+ D GV+K
Sbjct: 620 LLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 100/247 (40%), Gaps = 48/247 (19%)
Query: 351 YEA--VFELVRERGVSD---LYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVES 405
YEA F L+R + S LY+ ++L C G + G+++H + G D ++
Sbjct: 63 YEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVP 122
Query: 406 ALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEP 465
LV Y+ +D AQ + + E+ + + WN +IG +N R E + +++ M+ +G+
Sbjct: 123 KLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRA 182
Query: 466 DYITFIGVLFAC-------------------SHT----------------GLVDEGRRYF 490
D T+ V+ AC SH G VD RR F
Sbjct: 183 DEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLF 242
Query: 491 ALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLEN---ADCRYDHSLWAVLLGACTK 547
M + + +N +I+ E + EA LL+ + W + G C +
Sbjct: 243 DRMSERDAVS-----WNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLE 297
Query: 548 CSDYVTA 554
+Y+ A
Sbjct: 298 AGNYIGA 304
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 175/582 (30%), Positives = 289/582 (49%), Gaps = 46/582 (7%)
Query: 65 VLY--ASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTL 122
VLY ASLL TC + F+ G LHAH + SG+ D + L+T Y L +AQT+
Sbjct: 82 VLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNL-LDEAQTI 140
Query: 123 FDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDL 182
++ + + W LI +Y R R S+ ++ +M+ + + FT SVI A + L D
Sbjct: 141 TENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDF 200
Query: 183 ALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIST 242
A G +H + N + +AL+ MY R V A +LFD E D V W AII+
Sbjct: 201 AYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSE-RDAVSWNAIINC 259
Query: 243 LTRNDMFREALRLFVAMH----------------------------------RGCGLVPD 268
T + EA +L M+ R C +
Sbjct: 260 YTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIG 319
Query: 269 GFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV--VESSLLDMYGKCGKVGQARVV 326
L AC+++G L+ GK H V+ + + V +SL+ MY +C + A +V
Sbjct: 320 SVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIV 379
Query: 327 FDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLY----AFGTVLRACSGVAAV 382
F ++ + +W +++S + N+ E L++E +S + ++L + V +
Sbjct: 380 FQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNL 439
Query: 383 MLGKEVHCQYVRKGGWRD-VIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGG 441
GKE HC +R+ ++D +I+ ++LVD+YAK G + A+R+F SM R+++T+ ++I G
Sbjct: 440 QHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDG 499
Query: 442 LAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKP 501
+ G+G L F+DM + G++PD++T + VL ACSH+ LV EG F M +GI+
Sbjct: 500 YGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRL 559
Query: 502 GVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARK- 560
+EHY+CM+DL RA +++A + ++ A LL AC + E A K
Sbjct: 560 RLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKL 619
Query: 561 MIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKK 602
++E +P+ Y+LL ++Y G W+ + ++ L+ D GV+K
Sbjct: 620 LLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 100/247 (40%), Gaps = 48/247 (19%)
Query: 351 YEA--VFELVRERGVSD---LYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVES 405
YEA F L+R + S LY+ ++L C G + G+++H + G D ++
Sbjct: 63 YEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVP 122
Query: 406 ALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEP 465
LV Y+ +D AQ + + E+ + + WN +IG +N R E + +++ M+ +G+
Sbjct: 123 KLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRA 182
Query: 466 DYITFIGVLFAC-------------------SHT----------------GLVDEGRRYF 490
D T+ V+ AC SH G VD RR F
Sbjct: 183 DEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLF 242
Query: 491 ALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLEN---ADCRYDHSLWAVLLGACTK 547
M + + +N +I+ E + EA LL+ + W + G C +
Sbjct: 243 DRMSERDAVS-----WNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLE 297
Query: 548 CSDYVTA 554
+Y+ A
Sbjct: 298 AGNYIGA 304
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 177/608 (29%), Positives = 294/608 (48%), Gaps = 48/608 (7%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
Y L+Q T+ LH LHA + I D F+ + L++ Y + QA +FD +
Sbjct: 25 YGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLASKLISFYTR-QDRFRQALHVFDEI 83
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLF-----SQMLDLDM-EPNAFTISSVITAASKLR 180
VR+ ++ +L+ AYT ++ LF S D P++ +IS V+ A S
Sbjct: 84 TVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCD 143
Query: 181 DLALGAC---LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWT 237
D LG+ +H VI GF S+ + + ++ Y + + A K+FDE E DVV W
Sbjct: 144 DFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSE-RDVVSWN 202
Query: 238 AIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVG 297
++IS +++ F + +++ AM P+G T ++ AC L G E+H K++
Sbjct: 203 SMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIE 262
Query: 298 LGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVS-------------------- 337
I ++ + ++++ Y KCG + AR +FD + +K+SV+
Sbjct: 263 NHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMAL 322
Query: 338 -----------WTAMLSAYCQNKEYEAVF----ELVRERGVSDLYAFGTVLRACSGVAAV 382
W AM+S QN +E V E++R + ++L + + + +
Sbjct: 323 FSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNL 382
Query: 383 MLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGL 442
GKE+H +R G ++ V ++++D YAK G + AQR+F + + R+ I W A+I
Sbjct: 383 KGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAY 442
Query: 443 AQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPG 502
A +G LF+ M G +PD +T VL A +H+G D + F M+ +Y I+PG
Sbjct: 443 AVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPG 502
Query: 503 VEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMI 562
VEHY CM+ +L RA + +A + +W LL + D A ++
Sbjct: 503 VEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLF 562
Query: 563 ELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQKGSLSGLA 622
E+EP+ +Y ++ N+Y GRW +A +R M+ G+KK+PG SWI E +KG S +A
Sbjct: 563 EMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWI--ETEKGLRSFIA 620
Query: 623 NVNVFERS 630
+ ERS
Sbjct: 621 KDSSCERS 628
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 212/483 (43%), Gaps = 90/483 (18%)
Query: 110 LKLGPHLPQA-QTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFT 168
+KLG + +A Q L + AV D A+ LI +TR P++ LQL ++++ ++P+ F
Sbjct: 1 MKLGFEIQRALQGLLNKAAV-DGGAYGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNF- 58
Query: 169 ISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESP 228
++S L+ Y R R AL +FDE
Sbjct: 59 ----------------------------------LASKLISFYTRQDRFRQALHVFDE-I 83
Query: 229 EPEDVVGWTAIISTLTRNDMFREALRLFVA-MHRGC----GLVPDGFTFGTLLAA---CA 280
+ + A++ T +M+ +A LF++ + C PD + +L A C
Sbjct: 84 TVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCD 143
Query: 281 NLGWLRQ-GKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWT 339
+ WL +++H V+ G +V V + ++ Y KC + AR VFD + +++ VSW
Sbjct: 144 DF-WLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWN 202
Query: 340 AMLSAYCQNKEYEAVFELVRER-GVSDLYAFG----TVLRACSGVAAVMLGKEVHCQYVR 394
+M+S Y Q+ +E ++ + SD G +V +AC + ++ G EVH + +
Sbjct: 203 SMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIE 262
Query: 395 KGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQI--------------------- 433
D+ + +A++ YAKCG +D+A+ LF M ++ +
Sbjct: 263 NHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMAL 322
Query: 434 ----------TWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLV 483
TWNAMI GL QN EV+ F +MI+ G P+ +T +L + +++ +
Sbjct: 323 FSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNL 382
Query: 484 DEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSL--WAVL 541
G+ A + G + +ID + + A+ + +N C+ D SL W +
Sbjct: 383 KGGKEIHAFAIRN-GADNNIYVTTSIIDNYAKLGFLLGAQRVFDN--CK-DRSLIAWTAI 438
Query: 542 LGA 544
+ A
Sbjct: 439 ITA 441
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 34/285 (11%)
Query: 30 STDSEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAH 89
S +S I + + GS + D V S+ Q C ++S + G +H
Sbjct: 200 SWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKK 259
Query: 90 ALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPIN 149
+++ I D + N+++ Y K G L A+ LFD ++ +D + + ++IS Y G
Sbjct: 260 MIENHIQMDLSLCNAVIGFYAKCGS-LDYARALFDEMSEKDSVTYGAIISGYMAHGLVKE 318
Query: 150 SLQLFSQMLDLDM-------------------------------EPNAFTISSVITAASK 178
++ LFS+M + + PN T+SS++ + +
Sbjct: 319 AMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTY 378
Query: 179 LRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTA 238
+L G +HA I G +N ++++++D Y + + A ++FD + ++ WTA
Sbjct: 379 SSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKD-RSLIAWTA 437
Query: 239 IISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLG 283
II+ + A LF M + G PD T +L+A A+ G
Sbjct: 438 IITAYAVHGDSDSACSLFDQM-QCLGTKPDDVTLTAVLSAFAHSG 481
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 4/183 (2%)
Query: 60 PNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQA 119
PN V +SLL + T +S+ G +HA A+++G ++ +V S++ Y KLG L A
Sbjct: 364 PN--TVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLG-FLLGA 420
Query: 120 QTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKL 179
Q +FD+ R +IAWT++I+AY G ++ LF QM L +P+ T+++V++A +
Sbjct: 421 QRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHS 480
Query: 180 RDLALGA-CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTA 238
D + +M+ + +V + R + DA++ + P W A
Sbjct: 481 GDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGA 540
Query: 239 IIS 241
+++
Sbjct: 541 LLN 543
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 169/563 (30%), Positives = 290/563 (51%), Gaps = 16/563 (2%)
Query: 58 LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLP 117
+PN ++ ++ C S + G +H + ++SG V NS+L +Y
Sbjct: 123 FEPNTSTLVL--VIHACR--SLWFDGEKIHGYVIRSGFCGISSVQNSILCMYAD--SDSL 176
Query: 118 QAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQML-DLDMEPNAFTISSVITAA 176
A+ LFD ++ RD+I+W+ +I +Y ++ P+ L+LF +M+ + EP+ T++SV+ A
Sbjct: 177 SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
Query: 177 SKLRDLALGACLHAMVISRGFH-SNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVG 235
+ + D+ +G +H I RGF ++ + ++L+DMY + V A ++FDE+ ++V
Sbjct: 237 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETT-CRNIVS 295
Query: 236 WTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV 295
W +I++ N + EAL +F M + V D T +LL C K +H +
Sbjct: 296 WNSILAGFVHNQRYDEALEMFHLMVQEAVEV-DEVTVVSLLRVCKFFEQPLPCKSIHGVI 354
Query: 296 VGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQ-NKEYEAV 354
+ G N V SSL+D Y C V A V D + K+ VS + M+S + EA+
Sbjct: 355 IRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAI 414
Query: 355 FELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKG-GWRDVIVESALVDLYAK 413
R + ++L ACS A + K H +R+ D+ V +++VD YAK
Sbjct: 415 SIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAK 474
Query: 414 CGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGV 473
CG ++ A+R F + +N I+W +I A NG + L LF++M ++G P+ +T++
Sbjct: 475 CGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAA 534
Query: 474 LFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLEN--ADC 531
L AC+H GLV +G F MV+E KP ++HY+C++D+L RA I+ A L++N D
Sbjct: 535 LSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDV 593
Query: 532 RYDHSLWAVLLGAC-TKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAME 590
+ S W +L C + + V +++ELEP Y+L + + A W D
Sbjct: 594 KAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAM 653
Query: 591 IRKLMEDRGVKKLPGKSWIGSEN 613
+R+L+++R V+ + G S + N
Sbjct: 654 MRRLVKERKVRVVAGYSMVREGN 676
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 182/384 (47%), Gaps = 13/384 (3%)
Query: 100 FVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLD 159
F GNS+ Y+K G L FD + RD ++W ++ G L FS++
Sbjct: 62 FQGNSIADFYMKCGD-LCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV 120
Query: 160 LDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRD 219
EPN T+ VI A L G +H VI GF + + ++++ MY + ++
Sbjct: 121 WGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-S 177
Query: 220 ALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAAC 279
A KLFDE E DV+ W+ +I + ++ L+LF M PD T ++L AC
Sbjct: 178 ARKLFDEMSE-RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
Query: 280 ANLGWLRQGKELHAKVVGLGI-CGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSW 338
+ + G+ +H + G +V V +SL+DMY K V A VFD +N VSW
Sbjct: 237 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSW 296
Query: 339 TAMLSAYCQNKEYEAVFE----LVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVR 394
++L+ + N+ Y+ E +V+E D ++LR C + K +H +R
Sbjct: 297 NSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIR 356
Query: 395 KGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLEL 454
+G + + S+L+D Y C VD A + SM ++ ++ + MI GLA GR E + +
Sbjct: 357 RGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISI 416
Query: 455 FEDMIKEGMEPDYITFIGVLFACS 478
F M P+ IT I +L ACS
Sbjct: 417 FCHMRD---TPNAITVISLLNACS 437
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 129/300 (43%), Gaps = 27/300 (9%)
Query: 249 FREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVES 308
+RE + + + R D F F + ACA L WL QG +
Sbjct: 25 WREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQG-------------------N 65
Query: 309 SLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAM---LSAYCQNKEYEAVFELVRERGVS- 364
S+ D Y KCG + FD + ++SVSW + L Y +E F +R G
Sbjct: 66 SIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEP 125
Query: 365 DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLF 424
+ V+ AC + G+++H +R G V+++++ +YA + A++LF
Sbjct: 126 NTSTLVLVIHACRSLW--FDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLF 182
Query: 425 LSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEG-MEPDYITFIGVLFACSHTGLV 483
M R+ I+W+ +I Q+ L+LF++M+ E EPD +T VL AC+ +
Sbjct: 183 DEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDI 242
Query: 484 DEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLG 543
D GR + V N +ID+ + ++ A + + CR S ++L G
Sbjct: 243 DVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAG 302
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 163/465 (35%), Positives = 246/465 (52%), Gaps = 6/465 (1%)
Query: 150 SLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVD 209
S+ L+ ML P+AF+ ++ + + L G LH V G + + +AL+
Sbjct: 37 SISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALIS 96
Query: 210 MYGRNRAVRDALKLFDESPEPEDV-VGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPD 268
MY + V DA K+F+E+P+ + V + A+IS T N +A +F M + G+ D
Sbjct: 97 MYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRM-KETGVSVD 155
Query: 269 GFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFD 328
T L+ C +L G+ LH + V G+ V V +S + MY KCG V R +FD
Sbjct: 156 SVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFD 215
Query: 329 RLGDKNSVSWTAMLSAYCQNKEYEAVFEL---VRERGV-SDLYAFGTVLRACSGVAAVML 384
+ K ++W A++S Y QN V EL ++ GV D + +VL +C+ + A +
Sbjct: 216 EMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKI 275
Query: 385 GKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQ 444
G EV G +V V +A + +YA+CG + A+ +F M V++ ++W AMIG
Sbjct: 276 GHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGM 335
Query: 445 NGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVE 504
+G G L LF+DMIK G+ PD F+ VL ACSH+GL D+G F M EY ++PG E
Sbjct: 336 HGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPE 395
Query: 505 HYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIEL 564
HY+C++DLLGRA ++EA +E+ D ++W LLGAC + AE K+IE
Sbjct: 396 HYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEF 455
Query: 565 EPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
EP+ YVL+ NIY IR +M +R +K PG S++
Sbjct: 456 EPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYV 500
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 223/458 (48%), Gaps = 30/458 (6%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDS- 125
+ +L++C S + G LH H K G ++ FV +L+++Y K G + A+ +F+
Sbjct: 56 FPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCG-LVADARKVFEEN 114
Query: 126 -LAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLAL 184
+ + + + +LIS YT + ++ +F +M + + ++ T+ ++ + L L
Sbjct: 115 PQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWL 174
Query: 185 GACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLT 244
G LH + G S + ++ + MY + +V +LFDE P + ++ W A+IS +
Sbjct: 175 GRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMP-VKGLITWNAVISGYS 233
Query: 245 RNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNV 304
+N + + L L+ M + G+ PD FT ++L++CA+LG + G E+ V G NV
Sbjct: 234 QNGLAYDVLELYEQM-KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNV 292
Query: 305 VVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYE---AVFELVRER 361
V ++ + MY +CG + +AR VFD + K+ VSWTAM+ Y + E +F+ + +R
Sbjct: 293 FVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKR 352
Query: 362 GV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVE------SALVDLYAKC 414
G+ D F VL ACS G E+ + R+ +E S LVDL +
Sbjct: 353 GIRPDGAVFVMVLSACSHSGLTDKGLELF-----RAMKREYKLEPGPEHYSCLVDLLGRA 407
Query: 415 GCVDFAQRLFLSMEVR-NQITWNAMIGGLAQNGRGTEVLEL-FEDMIKEGMEPDYITFIG 472
G +D A SM V + W A++G + + ++ EL F +I+ EP+ I +
Sbjct: 408 GRLDEAMEFIESMPVEPDGAVWGALLGACKIH-KNVDMAELAFAKVIE--FEPNNIGYYV 464
Query: 473 VLFACSHTGLVDEGRRYFALMVDEYGI--KPG---VEH 505
++ EG +M+ E KPG VEH
Sbjct: 465 LMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEH 502
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 234/401 (58%), Gaps = 7/401 (1%)
Query: 220 ALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLV-PDGFTFGTLLAA 278
A K+F + +P +V W +I A L+ M R GLV PD T+ L+ A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREM-RVSGLVEPDTHTYPFLIKA 130
Query: 279 CANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSW 338
+ +R G+ +H+ V+ G + V++SLL +Y CG V A VFD++ +K+ V+W
Sbjct: 131 VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW 190
Query: 339 TAMLSAYCQNKEYEAVFELVRE---RGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVR 394
++++ + +N + E L E +G+ D + ++L AC+ + A+ LGK VH ++
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 395 KGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLEL 454
G R++ + L+DLYA+CG V+ A+ LF M +N ++W ++I GLA NG G E +EL
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 455 FEDM-IKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLL 513
F+ M EG+ P ITF+G+L+ACSH G+V EG YF M +EY I+P +EH+ CM+DLL
Sbjct: 311 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 370
Query: 514 GRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYV 573
RA +++A +++ + + +W LLGACT D AE ++++LEP+ YV
Sbjct: 371 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 430
Query: 574 LLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
LL N+Y + RW+D +IRK M GVKK+PG S + N+
Sbjct: 431 LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNR 471
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 203/391 (51%), Gaps = 17/391 (4%)
Query: 69 SLLQTCTKTSSFLHGTTLHAHALKSGIH-SDRFVGNSLLTLYLKLG--PHLPQAQTLFDS 125
+LLQT SS +HA +++ G+ SD +G L+ + L P + A +F
Sbjct: 20 NLLQT-YGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSK 78
Query: 126 LAVR-DIIAWTSLISAYTRAGRPINSLQLFSQM-LDLDMEPNAFTISSVITAASKLRDLA 183
+ ++ W +LI Y G I++ L+ +M + +EP+ T +I A + + D+
Sbjct: 79 IEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVR 138
Query: 184 LGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTL 243
LG +H++VI GF S + ++L+ +Y V A K+FD+ PE +D+V W ++I+
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE-KDLVAWNSVINGF 197
Query: 244 TRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGN 303
N EAL L+ M+ G+ PDGFT +LL+ACA +G L GK +H ++ +G+ N
Sbjct: 198 AENGKPEEALALYTEMNSK-GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 256
Query: 304 VVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGV 363
+ + LLD+Y +CG+V +A+ +FD + DKNSVSWT+++ N + EL +
Sbjct: 257 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 316
Query: 364 SD-----LYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVE--SALVDLYAKCGC 416
++ F +L ACS V G E + + +R+ + +E +VDL A+ G
Sbjct: 317 TEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQ 375
Query: 417 VDFAQRLFLSMEVR-NQITWNAMIGGLAQNG 446
V A SM ++ N + W ++G +G
Sbjct: 376 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 148/280 (52%), Gaps = 4/280 (1%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
Y L++ T + G T+H+ ++SG S +V NSLL LY G + A +FD +
Sbjct: 124 YPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG-DVASAYKVFDKM 182
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
+D++AW S+I+ + G+P +L L+++M ++P+ FTI S+++A +K+ L LG
Sbjct: 183 PEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGK 242
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
+H +I G N S+ L+D+Y R V +A LFDE + ++ V WT++I L N
Sbjct: 243 RVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD-KNSVSWTSLIVGLAVN 301
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV-VGLGICGNVV 305
+EA+ LF M GL+P TF +L AC++ G +++G E ++ I +
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 361
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLG-DKNSVSWTAMLSA 344
++D+ + G+V +A + N V W +L A
Sbjct: 362 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGA 401
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 146/438 (33%), Positives = 250/438 (57%), Gaps = 11/438 (2%)
Query: 177 SKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGW 236
SKL D ++ + + + S+ + L++ Y R + +A K+FDE P+ + + W
Sbjct: 5 SKLGDFPSAVAVYGRMRKKNYMSSNI----LINGYVRAGDLVNARKVFDEMPDRK-LTTW 59
Query: 237 TAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVV 296
A+I+ L + + E L LF MH G G PD +T G++ + A L + G+++H +
Sbjct: 60 NAMIAGLIQFEFNEEGLSLFREMH-GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTI 118
Query: 297 GLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFE 356
G+ ++VV SSL MY + GK+ +V + +N V+W ++ QN E V
Sbjct: 119 KYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLY 178
Query: 357 LVRERGVS----DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYA 412
L + +S + F TVL +CS +A G+++H + ++ G V V S+L+ +Y+
Sbjct: 179 LYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYS 238
Query: 413 KCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKE-GMEPDYITFI 471
KCGC+ A + F E +++ W++MI +G+G E +ELF M ++ ME + + F+
Sbjct: 239 KCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFL 298
Query: 472 GVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADC 531
+L+ACSH+GL D+G F +MV++YG KPG++HY C++DLLGRA +++AE+++ +
Sbjct: 299 NLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPI 358
Query: 532 RYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEI 591
+ D +W LL AC + A+RV +++++++P+ YVLL N++ + RW D E+
Sbjct: 359 KTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEV 418
Query: 592 RKLMEDRGVKKLPGKSWI 609
RK M D+ VKK G SW
Sbjct: 419 RKSMRDKNVKKEAGISWF 436
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 183/365 (50%), Gaps = 10/365 (2%)
Query: 103 NSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDM 162
N L+ Y++ G L A+ +FD + R + W ++I+ + L LF +M L
Sbjct: 29 NILINGYVRAGD-LVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 87
Query: 163 EPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALK 222
P+ +T+ SV + ++ LR +++G +H I G + V++S+L MY RN ++D
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 223 LFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANL 282
+ P ++V W +I +N L L+ M + G P+ TF T+L++C++L
Sbjct: 148 VIRSMP-VRNLVAWNTLIMGNAQNGCPETVLYLY-KMMKISGCRPNKITFVTVLSSCSDL 205
Query: 283 GWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAML 342
QG+++HA+ + +G V V SSL+ MY KCG +G A F D++ V W++M+
Sbjct: 206 AIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMI 265
Query: 343 SAY---CQNKEYEAVFELVRERGVSDL--YAFGTVLRACSGVAAVMLGKEVHCQYVRKGG 397
SAY Q E +F + E+ ++ AF +L ACS G E+ V K G
Sbjct: 266 SAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYG 325
Query: 398 WRDVIVE-SALVDLYAKCGCVDFAQRLFLSMEVRNQIT-WNAMIGGLAQNGRGTEVLELF 455
++ + + +VDL + GC+D A+ + SM ++ I W ++ + +F
Sbjct: 326 FKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVF 385
Query: 456 EDMIK 460
+++++
Sbjct: 386 KEILQ 390
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 132/280 (47%), Gaps = 4/280 (1%)
Query: 83 GTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYT 142
G +H + +K G+ D V +SL +Y++ G L + + S+ VR+++AW +LI
Sbjct: 110 GQQIHGYTIKYGLELDLVVNSSLAHMYMRNGK-LQDGEIVIRSMPVRNLVAWNTLIMGNA 168
Query: 143 RAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTV 202
+ G P L L+ M PN T +V+++ S L G +HA I G S
Sbjct: 169 QNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVA 228
Query: 203 ISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRG 262
+ S+L+ MY + + DA K F E E ED V W+++IS + EA+ LF M
Sbjct: 229 VVSSLISMYSKCGCLGDAAKAFSER-EDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQ 287
Query: 263 CGLVPDGFTFGTLLAACANLGWLRQGKELHAKVV-GLGICGNVVVESSLLDMYGKCGKVG 321
+ + F LL AC++ G +G EL +V G + + ++D+ G+ G +
Sbjct: 288 TNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLD 347
Query: 322 QARVVFDRLGDKNS-VSWTAMLSAYCQNKEYEAVFELVRE 360
QA + + K V W +LSA +K E + +E
Sbjct: 348 QAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKE 387
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 8/226 (3%)
Query: 35 ILQHCKDGSLRQALHLLNTSQTT-LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKS 93
I+ + ++G L+L + + PN + + ++L +C+ + G +HA A+K
Sbjct: 164 IMGNAQNGCPETVLYLYKMMKISGCRPN--KITFVTVLSSCSDLAIRGQGQQIHAEAIKI 221
Query: 94 GIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQL 153
G S V +SL+++Y K G L A F D + W+S+ISAY G+ +++L
Sbjct: 222 GASSVVAVVSSLISMYSKCGC-LGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIEL 280
Query: 154 FSQMLD-LDMEPNAFTISSVITAASK--LRDLALGACLHAMVISRGFHSNTVISSALVDM 210
F+ M + +ME N +++ A S L+D L MV GF + +VD+
Sbjct: 281 FNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGL-ELFDMMVEKYGFKPGLKHYTCVVDL 339
Query: 211 YGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLF 256
GR + A + P D+V W ++S + A R+F
Sbjct: 340 LGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVF 385
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 235/411 (57%), Gaps = 20/411 (4%)
Query: 217 VRDALKLFDESPEPEDVVGWTAIISTLTRNDMFR--EALRLFVAMHRGCGLVPDGFTFGT 274
V A ++FD S E W +I +D+ R EA L+ M PD TF
Sbjct: 99 VNYAFRVFD-SIENHSSFMWNTLIRACA-HDVSRKEEAFMLYRKMLERGESSPDKHTFPF 156
Query: 275 LLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKN 334
+L ACA + +GK++H ++V G G+V V + L+ +YG CG + AR VFD + +++
Sbjct: 157 VLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERS 216
Query: 335 SVSWTAMLSAYCQNKEYEAVFELVRERGVS---DLYAFGTVLRACSGVAAVMLGKEVHCQ 391
VSW +M+ A + EY++ +L RE S D Y +VL AC+G+ ++ LG H
Sbjct: 217 LVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAF 276
Query: 392 YVRKGG---WRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRG 448
+RK DV+V+++L+++Y KCG + A+++F M+ R+ +WNAMI G A +GR
Sbjct: 277 LLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRA 336
Query: 449 TEVLELFEDMI--KEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHY 506
E + F+ M+ +E + P+ +TF+G+L AC+H G V++GR+YF +MV +Y I+P +EHY
Sbjct: 337 EEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHY 396
Query: 507 NCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVT-AERVARKMIELE 565
C++DL+ RA I EA ++ + + D +W LL AC K V +E +AR +I +
Sbjct: 397 GCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTK 456
Query: 566 PDFHLS-------YVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
D S YVLL +Y + RWND +RKLM + G++K PG S I
Sbjct: 457 EDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSI 507
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 186/406 (45%), Gaps = 33/406 (8%)
Query: 69 SLLQTCTKTSSFLHGTTLHAHALKSGIHSDR---FVGNSLLTLYLKLGPHLPQAQTLFDS 125
SL +TC+ S LHA L++ + F+ +L L + A +FDS
Sbjct: 53 SLAETCSDMSQL---KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFS-DVNYAFRVFDS 108
Query: 126 LAVRDIIAWTSLISAYTR-AGRPINSLQLFSQMLDL-DMEPNAFTISSVITAASKLRDLA 183
+ W +LI A R + L+ +ML+ + P+ T V+ A + + +
Sbjct: 109 IENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFS 168
Query: 184 LGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTL 243
G +H ++ GF + +++ L+ +YG + A K+FDE PE +V W ++I L
Sbjct: 169 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPE-RSLVSWNSMIDAL 227
Query: 244 TRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHA---KVVGLGI 300
R + AL+LF M R PDG+T ++L+ACA LG L G HA + + +
Sbjct: 228 VRFGEYDSALQLFREMQR--SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 285
Query: 301 CGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELV-- 358
+V+V++SL++MY KCG + A VF + ++ SW AM+ + + E
Sbjct: 286 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 345
Query: 359 ----RERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESAL------V 408
RE + F +L AC+ V G++ V RD +E AL V
Sbjct: 346 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMV-----RDYCIEPALEHYGCIV 400
Query: 409 DLYAKCGCVDFAQRLFLSMEVR-NQITWNAMIGGLAQNGRGTEVLE 453
DL A+ G + A + +SM ++ + + W +++ + G E+ E
Sbjct: 401 DLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 446
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 172/581 (29%), Positives = 292/581 (50%), Gaps = 39/581 (6%)
Query: 41 DGSLRQALHLLNTSQTT--LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSD 98
+G +A +LN Q+ + P++ V+ S+ C S G +H + ++ + S
Sbjct: 370 NGMFEEAFGILNQMQSVDKIQPDIATVV--SITSICGDLSFSREGRAVHGYTVRMEMQSR 427
Query: 99 RF-VGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQM 157
V NS++ +Y K G QA+ LF + RD+++W S+ISA+++ G + LF ++
Sbjct: 428 ALEVINSVIDMYGKCGL-TTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV 486
Query: 158 LDLDMEPNAFTISSVI---TAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRN 214
+ + + F++S+V+ T+ L G +H + G ++SA + +
Sbjct: 487 VS-EYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG-----DLTSAFLRL---- 536
Query: 215 RAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGT 274
+ E D+ W ++IS + E+LR F AM R + D T
Sbjct: 537 ----------ETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLG 586
Query: 275 LLAACANLGWLRQGKELHAKVVGLGICG----NVVVESSLLDMYGKCGKVGQARVVFDRL 330
++A NLG + QG+ H GL I + ++++L+ MYG+C + A VF +
Sbjct: 587 TISASGNLGLVLQGRCFH----GLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLI 642
Query: 331 GDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVH 389
D N SW ++SA QNK VF+L R + + F +L A + + + G + H
Sbjct: 643 SDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAH 702
Query: 390 CQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGT 449
C +R+G + V +ALVD+Y+ CG ++ ++F + V + WN++I +G G
Sbjct: 703 CHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGE 762
Query: 450 EVLELFEDMIKEG-MEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNC 508
+ +ELF+++ MEP+ +FI +L ACSH+G +DEG Y+ M +++G+KP EH
Sbjct: 763 KAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVW 822
Query: 509 MIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDF 568
++D+LGRA + EA + +W LL AC D + VA + E+EPD
Sbjct: 823 IVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDN 882
Query: 569 HLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
Y+ L N Y +G W +A+ +RK++ED +KKLPG S I
Sbjct: 883 ASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVI 923
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 133/450 (29%), Positives = 221/450 (49%), Gaps = 33/450 (7%)
Query: 84 TTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTR 143
+ LH A+++G+ D + N+L+ LY K G +L A+ +F + RDI++W ++++
Sbjct: 208 SMLHCLAIETGLVGDSSLCNALMNLYAK-GENLSSAECVFTHMEHRDIVSWNTIMTKCLA 266
Query: 144 AGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGF--HSNT 201
G P SLQ F M E + T S VI+A S + +L LG LH +VI G+ ++
Sbjct: 267 NGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHV 326
Query: 202 VISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHR 261
+ ++++ MY + A +F+E DV+ AI++ N MF EA + M
Sbjct: 327 SVGNSIISMYSKCGDTEAAETVFEELV-CRDVISSNAILNGFAANGMFEEAFGILNQMQS 385
Query: 262 GCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV-VESSLLDMYGKCGKV 320
+ PD T ++ + C +L + R+G+ +H V + + + V +S++DMYGKCG
Sbjct: 386 VDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLT 445
Query: 321 GQARVVFDRLGDKNSVSWTAMLSAYCQN----KEYEAVFELVRERGVSDLYAFGTV---L 373
QA ++F ++ VSW +M+SA+ QN K E+V E S ++ TV L
Sbjct: 446 TQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSK-FSLSTVLAIL 504
Query: 374 RACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQI 433
+C +++ GK VHC + G + RL E R+
Sbjct: 505 TSCDSSDSLIFGKSVHCWLQKLGDLTSAFL------------------RLETMSETRDLT 546
Query: 434 TWNAMIGGLAQNGRGTEVLELFEDMIKEG-MEPDYITFIGVLFACSHTGLVDEGRRYFAL 492
+WN++I G A +G E L F+ M +EG + D IT +G + A + GLV +GR + L
Sbjct: 547 SWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGL 606
Query: 493 MVDEYGIKPGVEHYNCMIDLLGRAEMIEEA 522
+ + + N +I + GR + IE A
Sbjct: 607 AIKSLR-ELDTQLQNTLITMYGRCKDIESA 635
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 210/408 (51%), Gaps = 16/408 (3%)
Query: 62 LKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQT 121
L+ VL + +++T T+T ++H ALK G+ D + LLT Y + G L +
Sbjct: 90 LRDVLRSFMMRTETETPR-----SVHCFALKCGLLQDLATSSKLLTFYGRTG-ELVSSSC 143
Query: 122 LFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRD 181
LFD L +D+I W S+I+A + GR I ++ LF +M+ E ++ T+ +A S L
Sbjct: 144 LFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHL 203
Query: 182 LALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIS 241
+ LH + I G ++ + +AL+++Y + + A +F E D+V W I++
Sbjct: 204 SRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTH-MEHRDIVSWNTIMT 262
Query: 242 TLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGIC 301
N R++L+ F +M G G D TF +++AC+++ L G+ LH V+ G
Sbjct: 263 KCLANGHPRKSLQYFKSM-TGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYS 321
Query: 302 --GNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVR 359
+V V +S++ MY KCG A VF+ L ++ +S A+L+ + N +E F ++
Sbjct: 322 PEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILN 381
Query: 360 E-----RGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVR-KGGWRDVIVESALVDLYAK 413
+ + D+ ++ C ++ G+ VH VR + R + V ++++D+Y K
Sbjct: 382 QMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGK 441
Query: 414 CGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKE 461
CG A+ LF + R+ ++WN+MI +QNG + LF++++ E
Sbjct: 442 CGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE 489
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 170/368 (46%), Gaps = 12/368 (3%)
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRND 247
+H + G + SS L+ YGR + + LFDE E +DV+ W ++I+ L +N
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKE-KDVIVWNSMITALNQNG 167
Query: 248 MFREALRLFVAM-HRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
+ A+ LF+ M H+G D T +A ++L R+ LH + G+ G+ +
Sbjct: 168 RYIAAVGLFIEMIHKGNEF--DSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSL 225
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVS-- 364
++L+++Y K + A VF + ++ VSW +++ N + + S
Sbjct: 226 CNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQ 285
Query: 365 --DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRD--VIVESALVDLYAKCGCVDFA 420
D F V+ ACS + + LG+ +H ++ G + V V ++++ +Y+KCG + A
Sbjct: 286 EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAA 345
Query: 421 QRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIK-EGMEPDYITFIGVLFACSH 479
+ +F + R+ I+ NA++ G A NG E + M + ++PD T + + C
Sbjct: 346 ETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGD 405
Query: 480 TGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWA 539
EGR V +E N +ID+ G+ + +AE L + R D W
Sbjct: 406 LSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHR-DLVSWN 464
Query: 540 VLLGACTK 547
++ A ++
Sbjct: 465 SMISAFSQ 472
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 164/546 (30%), Positives = 276/546 (50%), Gaps = 14/546 (2%)
Query: 69 SLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAV 128
+LL C + G ++H A KSG+ D V N+L++ Y K L A+ LF +
Sbjct: 156 NLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCA-ELGSAEVLFREMKD 214
Query: 129 RDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACL 188
+ ++W ++I AY+++G ++ +F M + ++E + TI ++++A L
Sbjct: 215 KSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL------ 268
Query: 189 HAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDM 248
H +V+ G ++ + ++LV Y R + A +L+ S + + +VG T+I+S
Sbjct: 269 HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLY-ASAKQDSIVGLTSIVSCYAEKGD 327
Query: 249 FREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVES 308
A+ F + C + D +L C + G LH + G+C +V +
Sbjct: 328 MDIAVVYFSKTRQLCMKI-DAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVN 386
Query: 309 SLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVS---- 364
L+ MY K V +F++L + +SW +++S Q+ FE+ + ++
Sbjct: 387 GLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLL 446
Query: 365 -DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRL 423
D ++L CS + + LGKE+H +R + V +AL+D+YAKCG A+ +
Sbjct: 447 PDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESV 506
Query: 424 FLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLV 483
F S++ TWN+MI G + +G L + +M ++G++PD ITF+GVL AC+H G V
Sbjct: 507 FKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFV 566
Query: 484 DEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLG 543
DEG+ F M+ E+GI P ++HY M+ LLGRA + EA L+ D + D ++W LL
Sbjct: 567 DEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLS 626
Query: 544 ACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKL 603
AC + E VARKM L+ YVL+ N+Y W+D + +R +M+D G
Sbjct: 627 ACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGY 686
Query: 604 PGKSWI 609
G S I
Sbjct: 687 LGVSQI 692
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 228/485 (47%), Gaps = 27/485 (5%)
Query: 55 QTTLDPNLKPVLYASLLQTCTKTSSF-LHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLG 113
+++L PN + L T T +SF L + H KSG+ +V SLL LYLK G
Sbjct: 41 RSSLTPN-HFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKG 99
Query: 114 PHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVI 173
+ AQ LFD + RD + W +LI Y+R G ++ +LF ML P+A T+ +++
Sbjct: 100 C-VTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLL 158
Query: 174 TAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDV 233
+ ++ G +H + G ++ + +AL+ Y + + A LF E + +
Sbjct: 159 PFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKD-KST 217
Query: 234 VGWTAIISTLTRNDMFREALRLFVAM-HRGCGLVPDGFTFGTLLAACANLGWLRQGKELH 292
V W +I +++ + EA+ +F M + + P T LL+A + + LH
Sbjct: 218 VSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISP--VTIINLLSAHVS------HEPLH 269
Query: 293 AKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYE 352
VV G+ ++ V +SL+ Y +CG + A ++ + V T+++S Y + + +
Sbjct: 270 CLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMD 329
Query: 353 -AVFELVRERGVS---DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALV 408
AV + R + D A +L C + + +G +H ++ G +V + L+
Sbjct: 330 IAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLI 389
Query: 409 DLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFED-MIKEGMEPDY 467
+Y+K V+ LF ++ I+WN++I G Q+GR + E+F M+ G+ PD
Sbjct: 390 TMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDA 449
Query: 468 ITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYN----CMIDLLGRAEMIEEAE 523
IT +L CS ++ G+ + Y ++ E+ N +ID+ + +AE
Sbjct: 450 ITIASLLAGCSQLCCLNLGKE-----LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAE 504
Query: 524 SLLEN 528
S+ ++
Sbjct: 505 SVFKS 509
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 213/450 (47%), Gaps = 23/450 (5%)
Query: 129 RDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAAS-KLRDLALGA- 186
RD+ + SL+ + + + +F +L + PN FT+S + A + L
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
+ + G + ++L+++Y + V A LFDE PE + VV W A+I +RN
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVV-WNALICGYSRN 129
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
+A +LF+ M + G P T LL C G++ QG+ +H G+ + V
Sbjct: 130 GYECDAWKLFIVMLQQ-GFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV 188
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRERGV 363
+++L+ Y KC ++G A V+F + DK++VSW M+ AY Q+ +E VF+ + E+ V
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV 248
Query: 364 SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRL 423
+ + + ++A + + +HC V+ G D+ V ++LV Y++CGC+ A+RL
Sbjct: 249 EI-----SPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
Query: 424 FLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLV 483
+ S + + + +++ A+ G + F + M+ D + +G+L C + +
Sbjct: 304 YASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHI 363
Query: 484 DEGRRYFALMVDEYGIKPGVEHYNCMID-LLGRAEMIEEAESLLENADCRYDHSL--WAV 540
D G + + Y IK G+ +++ L+ ++ E++L + + L W
Sbjct: 364 DIG-----MSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNS 418
Query: 541 LLGACTKCSDYVTAERVARKMI---ELEPD 567
++ C + TA V +M+ L PD
Sbjct: 419 VISGCVQSGRASTAFEVFHQMMLTGGLLPD 448
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 147/295 (49%), Gaps = 6/295 (2%)
Query: 61 NLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQ 120
+ V +L C K+S G +LH +A+KSG+ + V N L+T+Y K +
Sbjct: 344 KIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKF-DDVETVL 402
Query: 121 TLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQ-MLDLDMEPNAFTISSVITAASKL 179
LF+ L +I+W S+IS ++GR + ++F Q ML + P+A TI+S++ S+L
Sbjct: 403 FLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQL 462
Query: 180 RDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAI 239
L LG LH + F + + +AL+DMY + A +F P W ++
Sbjct: 463 CCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTAT-WNSM 521
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKE-LHAKVVGL 298
IS + + + AL ++ M R GL PD TF +L+AC + G++ +GK A +
Sbjct: 522 ISGYSLSGLQHRALSCYLEM-REKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEF 580
Query: 299 GICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK-NSVSWTAMLSAYCQNKEYE 352
GI + + ++ + G+ +A + ++ K +S W A+LSA ++E E
Sbjct: 581 GISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELE 635
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 177/577 (30%), Positives = 291/577 (50%), Gaps = 25/577 (4%)
Query: 66 LYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDS 125
++ LQ K ++ LHA ++ +H D + L++ L L A +F+
Sbjct: 18 IFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISA-LSLCRQTNLAVRVFNQ 76
Query: 126 LAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALG 185
+ ++ SLI A+ + +P + +FS+M + + FT ++ A S L +
Sbjct: 77 VQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVV 136
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGR--NRAVRDALKLFDESPEPEDVVGWTAIISTL 243
+H + G S+ + +AL+D Y R VRDA+KLF++ E D V W +++ L
Sbjct: 137 KMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSE-RDTVSWNSMLGGL 195
Query: 244 TRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGN 303
+ R+A RLF M + D ++ T+L A + + EL K+ N
Sbjct: 196 VKAGELRDARRLFDEMPQR-----DLISWNTMLDGYARCREMSKAFELFEKMPE----RN 246
Query: 304 VVVESSLLDMYGKCGKVGQARVVFDR--LGDKNSVSWTAMLSAYCQN---KEYEAVFELV 358
V S+++ Y K G + ARV+FD+ L KN V+WT +++ Y + KE + + + +
Sbjct: 247 TVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQM 306
Query: 359 RERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCV 417
G+ D A ++L AC+ + LG +H R + V +AL+D+YAKCG +
Sbjct: 307 VASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNL 366
Query: 418 DFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFAC 477
A +F + ++ ++WN M+ GL +G G E +ELF M +EG+ PD +TFI VL +C
Sbjct: 367 KKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSC 426
Query: 478 SHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSL 537
+H GL+DEG YF M Y + P VEHY C++DLLGR ++EA +++ + +
Sbjct: 427 NHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVI 486
Query: 538 WAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMED 597
W LLGAC ++ A+ V +++L+P +Y LL NIY A W +IR M+
Sbjct: 487 WGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKS 546
Query: 598 RGVKKLPGKSWIGSENQKGSLSGLANVNVFERSSVSS 634
GV+K G S + E+ G+ VF++S S
Sbjct: 547 MGVEKPSGASSVELED------GIHEFTVFDKSHPKS 577
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 176/559 (31%), Positives = 293/559 (52%), Gaps = 18/559 (3%)
Query: 64 PVLYASLLQTCTKTSSFLHGTTLHAHALKSGIH--SDRFVGNSLLTLYLKLGPHLPQAQT 121
PV + ++ + + S + LK G D FV +S +++Y +LG + ++
Sbjct: 214 PVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELG-DIESSRR 272
Query: 122 LFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQML-DLDMEPNAFTISSVITAASKLR 180
+FDS R+I W ++I Y + + S++LF + + ++ + T +A S L+
Sbjct: 273 VFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQ 332
Query: 181 DLALGACLHAMVISRGFHS-NTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAI 239
+ LG H V S+ F VI ++L+ MY R +V + +F E DVV W +
Sbjct: 333 QVELGRQFHGFV-SKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRE-RDVVSWNTM 390
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG 299
IS +N + E L L M + G D T LL+A +NL GK+ HA ++ G
Sbjct: 391 ISAFVQNGLDDEGLMLVYEMQKQ-GFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG 449
Query: 300 ICGNVVVESSLLDMYGKCGKVGQARVVFDRLG--DKNSVSWTAMLSAYCQNKEYEAVFEL 357
I + S L+DMY K G + ++ +F+ G +++ +W +M+S Y QN E F +
Sbjct: 450 IQFEGM-NSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLV 508
Query: 358 VR---ERGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAK 413
R E+ + + ++L ACS + +V LGK++H +R+ ++V V SALVD+Y+K
Sbjct: 509 FRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSK 568
Query: 414 CGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGV 473
G + +A+ +F + RN +T+ MI G Q+G G + LF M + G++PD ITF+ V
Sbjct: 569 AGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAV 628
Query: 474 LFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRY 533
L ACS++GL+DEG + F M + Y I+P EHY C+ D+LGR + EA ++
Sbjct: 629 LSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEG 688
Query: 534 D-HSLWAVLLGACTKCSDYVTAERVARKMIELE--PDFHLSYVLLGNIYRAVGRWNDAME 590
+ LW LLG+C + AE V+ ++ + + +F VLL N+Y +W +
Sbjct: 689 NIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDK 748
Query: 591 IRKLMEDRGVKKLPGKSWI 609
+R+ M ++G+KK G+S I
Sbjct: 749 VRRGMREKGLKKEVGRSGI 767
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 127/496 (25%), Positives = 245/496 (49%), Gaps = 16/496 (3%)
Query: 61 NLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKL--GPHLPQ 118
N Y+S L+ C +T + G +H H ++ +S R V NSL+ +Y+ P +
Sbjct: 104 NCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFE 163
Query: 119 ---AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITA 175
+ +FD++ ++++AW +LIS Y + GR + + F M+ ++++P+ + +V A
Sbjct: 164 YDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPA 223
Query: 176 ASKLRDLALGACLHAMVISRG--FHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDV 233
S R + + +++ G + + + S+ + MY + + ++FD E ++
Sbjct: 224 VSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVE-RNI 282
Query: 234 VGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHA 293
W +I +ND E++ LF+ +V D T+ +A + L + G++ H
Sbjct: 283 EVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHG 342
Query: 294 KVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN----K 349
V +V+ +SL+ MY +CG V ++ VF + +++ VSW M+SA+ QN +
Sbjct: 343 FVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDE 402
Query: 350 EYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVD 409
V+E+ ++ D +L A S + +GK+ H +R+G + + S L+D
Sbjct: 403 GLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NSYLID 461
Query: 410 LYAKCGCVDFAQRLF--LSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDY 467
+Y+K G + +Q+LF R+Q TWN+MI G QNG + +F M+++ + P+
Sbjct: 462 MYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNA 521
Query: 468 ITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLE 527
+T +L ACS G VD G++ + +Y + V + ++D+ +A I+ AE +
Sbjct: 522 VTVASILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDMFS 580
Query: 528 NADCRYDHSLWAVLLG 543
R + ++LG
Sbjct: 581 QTKERNSVTYTTMILG 596
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 219/465 (47%), Gaps = 23/465 (4%)
Query: 117 PQ-AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPN--AFTISSVI 173
PQ A+ LFD++ + W ++I + P +L +S+M N A+T SS +
Sbjct: 55 PQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTL 114
Query: 174 TAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDAL------KLFDES 227
A ++ ++L G +H +I +S+ V+ ++L++MY D K+FD +
Sbjct: 115 KACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD-N 173
Query: 228 PEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQ 287
++VV W +IS + EA R F M R + P +F + A + +++
Sbjct: 174 MRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMR-MEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 288 GKELHAKVVGLG--ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAY 345
+ ++ LG ++ V SS + MY + G + +R VFD ++N W M+ Y
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVY 292
Query: 346 CQNKEYEAVFELVRE-----RGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRD 400
QN EL E VSD + A S + V LG++ H +
Sbjct: 293 VQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELP 352
Query: 401 VIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIK 460
+++ ++L+ +Y++CG V + +FLSM R+ ++WN MI QNG E L L +M K
Sbjct: 353 IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 412
Query: 461 EGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIK-PGVEHYNCMIDLLGRAEMI 519
+G + DYIT +L A S+ + G++ A ++ + GI+ G+ Y +ID+ ++ +I
Sbjct: 413 QGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQ-GIQFEGMNSY--LIDMYSKSGLI 469
Query: 520 EEAESLLENAD-CRYDHSLWAVLLGACTKCSDYVTAERVARKMIE 563
++ L E + D + W ++ T+ V RKM+E
Sbjct: 470 RISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 167/548 (30%), Positives = 279/548 (50%), Gaps = 12/548 (2%)
Query: 69 SLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAV 128
+LL ++ + H +HA + G + +G+SL Y++ L A + F+ +
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQ-SNRLDFATSSFNRIPC 67
Query: 129 --RDIIAWTSLISAYTRAGRPINS--LQLFSQMLDLDMEPNAFTISSVITAASKLRDLAL 184
R+ +W +++S Y+++ S L L+++M ++F + I A L L
Sbjct: 68 WKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLEN 127
Query: 185 GACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLT 244
G +H + + G + ++ +LV+MY + + A K+FDE P V+ W ++
Sbjct: 128 GILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVL-WGVLMKGYL 186
Query: 245 RNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG-ICGN 303
+ E RLF M R GL D T L+ AC N+ + GK +H + I +
Sbjct: 187 KYSKDPEVFRLFCLM-RDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQS 245
Query: 304 VVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFEL----VR 359
+++S++DMY KC + AR +F+ D+N V WT ++S + + + F+L +R
Sbjct: 246 DYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLR 305
Query: 360 ERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDF 419
E + + +L +CS + ++ GK VH +R G D + ++ +D+YA+CG +
Sbjct: 306 ESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQM 365
Query: 420 AQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSH 479
A+ +F M RN I+W++MI NG E L+ F M + + P+ +TF+ +L ACSH
Sbjct: 366 ARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSH 425
Query: 480 TGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWA 539
+G V EG + F M +YG+ P EHY CM+DLLGRA I EA+S ++N + S W
Sbjct: 426 SGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWG 485
Query: 540 VLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRG 599
LL AC + A +A K++ +EP+ YVLL NIY G W +R+ M +G
Sbjct: 486 ALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKG 545
Query: 600 VKKLPGKS 607
+K G+S
Sbjct: 546 YRKHVGQS 553
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 89/175 (50%), Gaps = 2/175 (1%)
Query: 68 ASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLA 127
A++L +C+ S HG ++H + +++GI D S + +Y + G ++ A+T+FD +
Sbjct: 316 AAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCG-NIQMARTVFDMMP 374
Query: 128 VRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALG-A 186
R++I+W+S+I+A+ G +L F +M ++ PN+ T S+++A S ++ G
Sbjct: 375 ERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWK 434
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIS 241
+M G + +VD+ GR + +A D P W A++S
Sbjct: 435 QFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLS 489
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 258/527 (48%), Gaps = 40/527 (7%)
Query: 85 TLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRA 144
T+H+ + + + +G L+ Y L + A+ +FD + R++I +I +Y
Sbjct: 60 TVHSRIILEDLRCNSSLGVKLMRAYASL-KDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 145 GRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVIS 204
G +++F M ++ P+ +T V+ A S + +G +H G S +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 205 SALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCG 264
+ LV MYG+ + +A + DE DVV W +++ +N F +AL + M
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSR-RDVVSWNSLVVGYAQNQRFDDALEVCREME-SVK 236
Query: 265 LVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQAR 324
+ D T +LL A +N NV MY +
Sbjct: 237 ISHDAGTMASLLPAVSNT-----------------TTENV--------MY--------VK 263
Query: 325 VVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVS----DLYAFGTVLRACSGVA 380
+F ++G K+ VSW M+ Y +N EL D + +VL AC +
Sbjct: 264 DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTS 323
Query: 381 AVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIG 440
A+ LGK++H RK ++++E+AL+D+YAKCGC++ A+ +F +M+ R+ ++W AMI
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 441 GLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIK 500
+GRG + + LF + G+ PD I F+ L ACSH GL++EGR F LM D Y I
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 501 PGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARK 560
P +EH CM+DLLGRA ++EA +++ + +W LLGAC SD A K
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503
Query: 561 MIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKS 607
+ +L P+ YVLL NIY GRW + IR +M+ +G+KK PG S
Sbjct: 504 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 550
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 186/405 (45%), Gaps = 43/405 (10%)
Query: 146 RPINSLQLFSQMLDLDMEPNA-----FTISSVITAASKLRDLALGACLHAMVISRGFHSN 200
R S ++ S + L+++ + F + V+ +R L +H+ +I N
Sbjct: 17 RKFQSRKVSSSLPKLELDQKSPQETVFLLGQVLDTYPDIRTLR---TVHSRIILEDLRCN 73
Query: 201 TVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMH 260
+ + L+ Y + V A K+FDE PE +V+ +I + N + E +++F M
Sbjct: 74 SSLGVKLMRAYASLKDVASARKVFDEIPE-RNVIIINVMIRSYVNNGFYGEGVKVFGTMC 132
Query: 261 RGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKV 320
GC + PD +TF +L AC+ G + G+++H +G+ + V + L+ MYGKCG +
Sbjct: 133 -GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFL 191
Query: 321 GQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRE-RGVSDLYAFGTVLRACSGV 379
+AR+V D + ++ VSW +++ Y QN+ ++ E+ RE V + GT+ V
Sbjct: 192 SEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAV 251
Query: 380 AAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMI 439
+ + E+ + + + +F M ++ ++WN MI
Sbjct: 252 S-------------------NTTTENVM-----------YVKDMFFKMGKKSLVSWNVMI 281
Query: 440 GGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGI 499
G +N E +EL+ M +G EPD ++ VL AC T + G++ ++ +
Sbjct: 282 GVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY-IERKKL 340
Query: 500 KPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGA 544
P + N +ID+ + +E+A + EN R D W ++ A
Sbjct: 341 IPNLLLENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTAMISA 384
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 153/342 (44%), Gaps = 20/342 (5%)
Query: 270 FTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDR 329
F G +L ++ LR +H++++ + N + L+ Y V AR VFD
Sbjct: 43 FLLGQVLDTYPDIRTLRT---VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDE 99
Query: 330 LGDKNSVSWTAMLSAYCQNKEY-EAVFELVRERGVS---DLYAFGTVLRACSGVAAVMLG 385
+ ++N + M+ +Y N Y E V G + D Y F VL+ACS +++G
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIG 159
Query: 386 KEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQN 445
+++H + G + V + LV +Y KCG + A+ + M R+ ++WN+++ G AQN
Sbjct: 160 RKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQN 219
Query: 446 GRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEH 505
R + LE+ +M + D T +L A S+T E Y M + G K V
Sbjct: 220 QRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMGKKSLVS- 276
Query: 506 YNCMIDLLGRAEMIEEAESL---LENADCRYDHSLWAVLLGACTKCSDYVTAER----VA 558
+N MI + + M EA L +E D +L AC S ++ +
Sbjct: 277 WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 336
Query: 559 RKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGV 600
RK +L P+ L L+ ++Y G A ++ + M+ R V
Sbjct: 337 RK--KLIPNLLLENALI-DMYAKCGCLEKARDVFENMKSRDV 375
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 93/178 (52%), Gaps = 4/178 (2%)
Query: 65 VLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFD 124
V S+L C TS+ G +H + + + + + N+L+ +Y K G L +A+ +F+
Sbjct: 310 VSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGC-LEKARDVFE 368
Query: 125 SLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLAL 184
++ RD+++WT++ISAY +GR +++ LFS++ D + P++ + + A S L
Sbjct: 369 NMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEE 428
Query: 185 G-ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLF-DESPEPEDVVGWTAII 240
G +C M + +VD+ GR V++A + D S EP + V W A++
Sbjct: 429 GRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERV-WGALL 485
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 174/541 (32%), Positives = 278/541 (51%), Gaps = 30/541 (5%)
Query: 87 HAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLI-SAYTRAG 145
H +K GI++ F+ N LL Y K+ A LFD + +R+I+ W LI R G
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKI-REFDDADKLFDEMPLRNIVTWNILIHGVIQRDG 117
Query: 146 RPINSLQL----FSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNT 201
+ L S++L D+ + + +I + ++ G LH +++ +G S+
Sbjct: 118 DTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSC 177
Query: 202 VISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAM-- 259
S++LV YG+ + +A ++F E+ D+V W A++S+ N M EA L M
Sbjct: 178 FPSTSLVHFYGKCGLIVEARRVF-EAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGS 236
Query: 260 ----HRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYG 315
RG D FTF +LL+AC + QGK++HA + + ++ V ++LL+MY
Sbjct: 237 DKNRFRG-----DYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYA 287
Query: 316 KCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVF----ELVRERGVSDLYAFGT 371
K + AR F+ + +N VSW AM+ + QN E +++ E D F +
Sbjct: 288 KSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFAS 347
Query: 372 VLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRN 431
VL +C+ +A+ K+V +KG + V ++L+ Y++ G + A F S+ +
Sbjct: 348 VLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPD 407
Query: 432 QITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFA 491
++W ++IG LA +G E L++FE M+++ ++PD ITF+ VL ACSH GLV EG R F
Sbjct: 408 LVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFK 466
Query: 492 LMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDY 551
M + Y I+ EHY C+IDLLGRA I+EA +L + A G C
Sbjct: 467 RMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKR 526
Query: 552 VTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGV--KKLPGKSWI 609
+ + A+K++E+EP ++Y +L N Y + G WN A +RK E R K PG SW+
Sbjct: 527 ESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRK-RERRNCYNPKTPGCSWL 585
Query: 610 G 610
G
Sbjct: 586 G 586
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 178/575 (30%), Positives = 279/575 (48%), Gaps = 60/575 (10%)
Query: 43 SLRQALHLLNTSQTTLD---PNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDR 99
SLR H L +L PNLK ++ + C+ T L A +K+ ++ D
Sbjct: 754 SLRVPSHHLRDFSASLSLAPPNLKKII-----KQCS-TPKLLESAL--AAMIKTSLNQDC 805
Query: 100 FVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLD 159
+ N +T L A + + ++ + +L + PI SL+L+ +ML
Sbjct: 806 RLMNQFITACTSF-KRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLR 864
Query: 160 LDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRD 219
+ P+++T SS++ A+S G L A + GF + I + L+D Y +R+
Sbjct: 865 DSVSPSSYTYSSLVKASSFAS--RFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIRE 922
Query: 220 ALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAAC 279
A K+FDE PE +D+ WT ++S A R + M L
Sbjct: 923 ARKVFDEMPERDDI-AWTTMVS----------AYRRVLDMDSANSL-------------- 957
Query: 280 ANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWT 339
++ K N + L++ Y G + QA +F+++ K+ +SWT
Sbjct: 958 --------ANQMSEK--------NEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWT 1001
Query: 340 AMLSAYCQNKEYE---AVFELVRERGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRK 395
M+ Y QNK Y AVF + E G+ D TV+ AC+ + + +GKEVH ++
Sbjct: 1002 TMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQN 1061
Query: 396 GGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELF 455
G DV + SALVD+Y+KCG ++ A +F ++ +N WN++I GLA +G E L++F
Sbjct: 1062 GFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMF 1121
Query: 456 EDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGR 515
M E ++P+ +TF+ V AC+H GLVDEGRR + M+D+Y I VEHY M+ L +
Sbjct: 1122 AKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSK 1181
Query: 516 AEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLL 575
A +I EA L+ N + + +W LL C + V AE K++ LEP Y LL
Sbjct: 1182 AGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLL 1241
Query: 576 GNIYRAVGRWNDAMEIRKLMEDRGVKKL-PGKSWI 609
++Y RW D EIR M + G++K+ PG S I
Sbjct: 1242 VSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSI 1276
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 156/474 (32%), Positives = 256/474 (54%), Gaps = 10/474 (2%)
Query: 147 PINSLQLFSQMLDLD---MEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVI 203
P N L L + DL+ + + ++++ + + L G +HA ++ F + V+
Sbjct: 38 PSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVM 97
Query: 204 SSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGC 263
+ L++MY + ++ +A K+F++ P+ D V WT +IS +++D +AL F M R
Sbjct: 98 GNTLLNMYAKCGSLEEARKVFEKMPQ-RDFVTWTTLISGYSQHDRPCDALLFFNQMLR-F 155
Query: 264 GLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQA 323
G P+ FT +++ A A G +LH V G NV V S+LLD+Y + G + A
Sbjct: 156 GYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDA 215
Query: 324 RVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFEL----VRERGVSDLYAFGTVLRACSGV 379
++VFD L +N VSW A+++ + + E EL +R+ +++ ++ ACS
Sbjct: 216 QLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSST 275
Query: 380 AAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMI 439
+ GK VH ++ G + L+D+YAK G + A+++F + R+ ++WN+++
Sbjct: 276 GFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLL 335
Query: 440 GGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGI 499
AQ+G G E + FE+M + G+ P+ I+F+ VL ACSH+GL+DEG Y+ LM + GI
Sbjct: 336 TAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GI 394
Query: 500 KPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVAR 559
P HY ++DLLGRA + A +E ++W LL AC + A
Sbjct: 395 VPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAE 454
Query: 560 KMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSEN 613
+ EL+PD +V+L NIY + GRWNDA +RK M++ GVKK P SW+ EN
Sbjct: 455 HVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIEN 508
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 214/405 (52%), Gaps = 21/405 (5%)
Query: 50 LLNTSQTTLDPNLKPV---LYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLL 106
LL TS L+ + P Y +LL+ CT + G +HAH L+S D +GN+LL
Sbjct: 43 LLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLL 102
Query: 107 TLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNA 166
+Y K G L +A+ +F+ + RD + WT+LIS Y++ RP ++L F+QML PN
Sbjct: 103 NMYAKCGS-LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNE 161
Query: 167 FTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDE 226
FT+SSVI AA+ R G LH + GF SN + SAL+D+Y R + DA +FD
Sbjct: 162 FTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFD- 220
Query: 227 SPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLR 286
+ E + V W A+I+ R +AL LF M R G P F++ +L AC++ G+L
Sbjct: 221 ALESRNDVSWNALIAGHARRSGTEKALELFQGMLRD-GFRPSHFSYASLFGACSSTGFLE 279
Query: 287 QGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYC 346
QGK +HA ++ G ++LLDMY K G + AR +FDRL ++ VSW ++L+AY
Sbjct: 280 QGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYA 339
Query: 347 QN---KEYEAVFELVRERGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGG----- 397
Q+ KE FE +R G+ + +F +VL ACS + G + + ++K G
Sbjct: 340 QHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY-ELMKKDGIVPEA 398
Query: 398 WRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR-NQITWNAMIGG 441
W V V VDL + G ++ A R M + W A++
Sbjct: 399 WHYVTV----VDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 169/578 (29%), Positives = 300/578 (51%), Gaps = 13/578 (2%)
Query: 46 QALHLLNTSQTTLDPNLKPVLYASLLQTCT-KTSSFLHGTTLHAHALKSGIHSDRFVGNS 104
+AL L +L N + S+++ C + FL G LH LK+G D V NS
Sbjct: 28 EALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNS 87
Query: 105 LLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEP 164
L+++Y K + +FD + RD +++ S+I++ + G +++L +M P
Sbjct: 88 LISMYAKFSRKYA-VRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIP 146
Query: 165 NAFTISSVITAASKL-RDLALGACLHAMV-ISRGFHSNTVISSALVDMYGRNRAVRDALK 222
+ ++S++ +++ + HA+V + + ++S+ALVDMY + A
Sbjct: 147 KSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFH 206
Query: 223 LFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANL 282
+FD+ E ++ V WTA+IS N + + LF AM R L P+ T ++L AC L
Sbjct: 207 VFDQM-EVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRE-NLRPNRVTLLSVLPACVEL 264
Query: 283 GWLRQ-GKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAM 341
+ KE+H G + + ++ + MY +CG V +RV+F+ ++ V W++M
Sbjct: 265 NYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSM 324
Query: 342 LSAYCQNKEYEAVFELV---RERGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGG 397
+S Y + + V L+ R+ G+ ++ ++ AC+ + VH Q ++ G
Sbjct: 325 ISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGF 384
Query: 398 WRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFED 457
+++ +AL+D+YAKCG + A+ +F + ++ ++W++MI +G G+E LE+F+
Sbjct: 385 MSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKG 444
Query: 458 MIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAE 517
MIK G E D + F+ +L AC+H GLV+E + F +Y + +EHY C I+LLGR
Sbjct: 445 MIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT-QAGKYHMPVTLEHYACYINLLGRFG 503
Query: 518 MIEEAESLLENADCRYDHSLWAVLLGAC-TKCSDYVTAERVARKMIELEPDFHLSYVLLG 576
I++A + N + +W+ LL AC T V + +A ++++ EPD +YVLL
Sbjct: 504 KIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLS 563
Query: 577 NIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
I+ G ++ A E+R++M+ R + K G S I E Q
Sbjct: 564 KIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPELQ 601
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 257/497 (51%), Gaps = 40/497 (8%)
Query: 151 LQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDM 210
L LF ++ + P+ FT+ V+ + +LR + G +H + G ++ +S++L+ M
Sbjct: 31 LALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGM 90
Query: 211 YGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGF 270
Y + K+FDE P+ DVV W +IS+ N F +A+ +F M + L D
Sbjct: 91 YASLGKIEITHKVFDEMPQ-RDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEG 149
Query: 271 TFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRL 330
T + L+AC+ L L G+ ++ VV +V + ++L+DM+ KCG + +AR VFD +
Sbjct: 150 TIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSM 208
Query: 331 GDKNS-------------------------------VSWTAMLSAYCQNKEYEAVFELVR 359
DKN V WTAM++ Y Q ++ EL R
Sbjct: 209 RDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFR 268
Query: 360 ---ERGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCG 415
G+ D + ++L C+ A+ GK +H D +V +ALVD+YAKCG
Sbjct: 269 CMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCG 328
Query: 416 CVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLF 475
C++ A +F ++ R+ +W ++I GLA NG L+L+ +M G+ D ITF+ VL
Sbjct: 329 CIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLT 388
Query: 476 ACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDH 535
AC+H G V EGR+ F M + + ++P EH +C+IDLL RA +++EAE L++ D
Sbjct: 389 ACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDE 448
Query: 536 SLWAV---LLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIR 592
+L V LL A + AERVA K+ ++E ++ LL ++Y + RW D +R
Sbjct: 449 TLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVR 508
Query: 593 KLMEDRGVKKLPGKSWI 609
+ M+D G++K PG S I
Sbjct: 509 RKMKDLGIRKFPGCSSI 525
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 197/395 (49%), Gaps = 41/395 (10%)
Query: 70 LLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVR 129
+L++ + + G +H +A+K+G+ D +V NSL+ +Y LG + +FD + R
Sbjct: 52 VLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGK-IEITHKVFDEMPQR 110
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQM-LDLDMEPNAFTISSVITAASKLRDLALGACL 188
D+++W LIS+Y GR +++ +F +M + +++ + TI S ++A S L++L +G +
Sbjct: 111 DVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERI 170
Query: 189 HAMVISRGFHSNTVISSALVDMY------GRNRAVRDALK-------------------- 222
+ V++ F + I +ALVDM+ + RAV D+++
Sbjct: 171 YRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRI 229
Query: 223 -----LFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLA 277
LF+ SP +DVV WTA+++ + + F EAL LF M G+ PD F +LL
Sbjct: 230 DEARVLFERSP-VKDVVLWTAMMNGYVQFNRFDEALELFRCMQTA-GIRPDNFVLVSLLT 287
Query: 278 ACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVS 337
CA G L QGK +H + + + VV ++L+DMY KCG + A VF + ++++ S
Sbjct: 288 GCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTAS 347
Query: 338 WTAMLSAYCQNKEYEAVFELVRER---GVS-DLYAFGTVLRACSGVAAVMLGKEV-HCQY 392
WT+++ N +L E GV D F VL AC+ V G+++ H
Sbjct: 348 WTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMT 407
Query: 393 VRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSM 427
R S L+DL + G +D A+ L M
Sbjct: 408 ERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 135/288 (46%), Gaps = 38/288 (13%)
Query: 236 WTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV 295
+ ++ +L F + L LF + RG GL PD FT +L + L + +G+++H
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGEL-RGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYA 72
Query: 296 VGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVF 355
V G+ + V +SL+ MY GK+ VFD + ++ VSW ++S+Y N +E
Sbjct: 73 VKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAI 132
Query: 356 ELVRERGVSDLYAF--GTV---LRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDL 410
+ + F GT+ L ACS + + +G+ ++ ++V V + +ALVD+
Sbjct: 133 GVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIY-RFVVTEFEMSVRIGNALVDM 191
Query: 411 YAKCGCVDFAQRLFLSME-------------------------------VRNQITWNAMI 439
+ KCGC+D A+ +F SM V++ + W AM+
Sbjct: 192 FCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMM 251
Query: 440 GGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGR 487
G Q R E LELF M G+ PD + +L C+ TG +++G+
Sbjct: 252 NGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGK 299
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 136/270 (50%), Gaps = 11/270 (4%)
Query: 104 SLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDME 163
S++ Y+ G + +A+ LF+ V+D++ WT++++ Y + R +L+LF M +
Sbjct: 218 SMVFGYVSTG-RIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
Query: 164 PNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKL 223
P+ F + S++T ++ L G +H + + V+ +ALVDMY + + AL++
Sbjct: 277 PDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEV 336
Query: 224 FDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLG 283
F E E D WT++I L N M AL L+ M G+ D TF +L AC + G
Sbjct: 337 FYEIKE-RDTASWTSLIYGLAMNGMSGRALDLYYEME-NVGVRLDAITFVAVLTACNHGG 394
Query: 284 WLRQGKEL-HAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRL---GDKNSVS-W 338
++ +G+++ H+ + S L+D+ + G + +A + D++ D+ V +
Sbjct: 395 FVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVY 454
Query: 339 TAMLSA---YCQNKEYEAVFELVRERGVSD 365
++LSA Y K E V E + + VSD
Sbjct: 455 CSLLSAARNYGNVKIAERVAEKLEKVEVSD 484
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 142/305 (46%), Gaps = 27/305 (8%)
Query: 338 WTAMLSAYCQNKEYEAVFELVRE-RG---VSDLYAFGTVLRACSGVAAVMLGKEVHCQYV 393
+ ML + K + V L E RG D + VL++ + V+ G++VH V
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 394 RKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLE 453
+ G D V ++L+ +YA G ++ ++F M R+ ++WN +I NGR + +
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 454 LFEDMIKE-GMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDL 512
+F+ M +E ++ D T + L ACS ++ G R + +V E+ + V N ++D+
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEM--SVRIGNALVDM 191
Query: 513 LGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERV--ARKMIELEP--DF 568
+ +++A ++ ++ + +++ G YV+ R+ AR + E P D
Sbjct: 192 FCKCGCLDKARAVFDSMRDKNVKCWTSMVFG-------YVSTGRIDEARVLFERSPVKDV 244
Query: 569 HLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKK--------LPGKSWIGSENQKGSLSG 620
L + + N Y R+++A+E+ + M+ G++ L G + G+ Q + G
Sbjct: 245 VL-WTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 621 LANVN 625
N N
Sbjct: 304 YINEN 308
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/366 (36%), Positives = 215/366 (58%), Gaps = 6/366 (1%)
Query: 249 FREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVES 308
F EAL + M + G PD FT+ LL AC L +R+GK++H +V LG+ +V V++
Sbjct: 113 FEEALCFYNEMMQR-GNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQN 171
Query: 309 SLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVR----ERGV- 363
SL++MYG+CG++ + VF++L K + SW++M+SA + L R E +
Sbjct: 172 SLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLK 231
Query: 364 SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRL 423
++ + L AC+ A+ LG +H +R ++IV+++LVD+Y KCGC+D A +
Sbjct: 232 AEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHI 291
Query: 424 FLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLV 483
F ME RN +T++AMI GLA +G G L +F MIKEG+EPD++ ++ VL ACSH+GLV
Sbjct: 292 FQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLV 351
Query: 484 DEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLG 543
EGRR FA M+ E ++P EHY C++DLLGRA ++EEA +++ + +W L
Sbjct: 352 KEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
Query: 544 ACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKL 603
C + + A+++++L Y+L+ N+Y W+D R + +G+K+
Sbjct: 412 QCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQT 471
Query: 604 PGKSWI 609
PG S +
Sbjct: 472 PGFSIV 477
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 139/280 (49%), Gaps = 6/280 (2%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
Y LL+ CT+ S G +H K G+ +D FV NSL+ +Y + G + + +F+ L
Sbjct: 135 YPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCG-EMELSSAVFEKL 193
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQML-DLDMEPNAFTISSVITAASKLRDLALG 185
+ +W+S++SA G L LF M + +++ + S + A + L LG
Sbjct: 194 ESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLG 253
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTR 245
+H ++ N ++ ++LVDMY + + AL +F + E + + ++A+IS L
Sbjct: 254 MSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIF-QKMEKRNNLTYSAMISGLAL 312
Query: 246 NDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV 305
+ ALR+F M + GL PD + ++L AC++ G +++G+ + A+++ G
Sbjct: 313 HGEGESALRMFSKMIKE-GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTA 371
Query: 306 VE-SSLLDMYGKCGKVGQARVVFDRLG-DKNSVSWTAMLS 343
L+D+ G+ G + +A + +KN V W LS
Sbjct: 372 EHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/507 (30%), Positives = 271/507 (53%), Gaps = 8/507 (1%)
Query: 120 QTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQM-LDLDMEPNAFTISSVITAASK 178
Q L D+ + + S I R + +LF + + + T +++ A +
Sbjct: 76 QILDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIR 135
Query: 179 LRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTA 238
L+ + ++ ++S GF + + ++ M+ + + DA +LFDE PE ++ + +
Sbjct: 136 LKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPE-RNLYSYYS 194
Query: 239 IISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGL 298
IIS + EA LF M + TF +L A A LG + GK+LH + L
Sbjct: 195 IISGFVNFGNYVEAFELFKMMWEELSDC-ETHTFAVMLRASAGLGSIYVGKQLHVCALKL 253
Query: 299 GICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELV 358
G+ N V L+DMY KCG + AR F+ + +K +V+W +++ Y + E L+
Sbjct: 254 GVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLL 313
Query: 359 ---RERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKC 414
R+ GVS D + ++R + +A + L K+ H +R G +++ +ALVD Y+K
Sbjct: 314 YDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKW 373
Query: 415 GCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVL 474
G VD A+ +F + +N I+WNA++GG A +GRGT+ ++LFE MI + P+++TF+ VL
Sbjct: 374 GRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVL 433
Query: 475 FACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYD 534
AC+++GL ++G F M + +GIKP HY CMI+LLGR +++EA + + A +
Sbjct: 434 SACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTT 493
Query: 535 HSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKL 594
++WA LL AC + VA K+ + P+ +YV++ N+Y ++G+ +A + +
Sbjct: 494 VNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLET 553
Query: 595 MEDRGVKKLPGKSWIGSENQKGS-LSG 620
+E +G+ +P +W+ +Q S LSG
Sbjct: 554 LESKGLSMMPACTWVEVGDQTHSFLSG 580
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 190/417 (45%), Gaps = 13/417 (3%)
Query: 44 LRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGN 103
R+A L + + Y +L++ C + S ++ + +G ++++ N
Sbjct: 103 FREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMN 162
Query: 104 SLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDME 163
+L +++K G + A+ LFD + R++ ++ S+IS + G + + +LF M + +
Sbjct: 163 RILLMHVKCG-MIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 164 PNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKL 223
T + ++ A++ L + +G LH + G NT +S L+DMY + + DA
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 224 FDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLG 283
F+ PE + V W +I+ + EAL L M R G+ D FT ++ L
Sbjct: 282 FECMPE-KTTVAWNNVIAGYALHGYSEEALCLLYDM-RDSGVSIDQFTLSIMIRISTKLA 339
Query: 284 WLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLS 343
L K+ HA ++ G +V ++L+D Y K G+V AR VFD+L KN +SW A++
Sbjct: 340 KLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMG 399
Query: 344 AYCQN-KEYEAV--FE-LVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR 399
Y + + +AV FE ++ + F VL AC+ G E+ G +
Sbjct: 400 GYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIK 459
Query: 400 DVIVESA-LVDLYAKCGCVDFAQRLFLSMEVRNQIT-WNAMIGGLAQNGRGTEVLEL 454
+ A +++L + G +D A ++ + W A++ R E LEL
Sbjct: 460 PRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNAC----RMQENLEL 512
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 152/306 (49%), Gaps = 10/306 (3%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
+A +L+ S G LH ALK G+ + FV L+ +Y K G + A+ F+ +
Sbjct: 227 FAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGD-IEDARCAFECM 285
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
+ +AW ++I+ Y G +L L M D + + FT+S +I ++KL L L
Sbjct: 286 PEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTK 345
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
HA +I GF S V ++ALVD Y + V A +FD+ P ++++ W A++ +
Sbjct: 346 QAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPR-KNIISWNALMGGYANH 404
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGL-GICGNVV 305
+A++LF M + P+ TF +L+ACA G QG E+ + + GI +
Sbjct: 405 GRGTDAVKLFEKM-IAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAM 463
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGDKNSVS-WTAMLSAYCQNKEYEAVFELVRERGVS 364
+ ++++ G+ G + +A R K +V+ W A+L+A C+ +E + +V E+
Sbjct: 464 HYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNA-CRMQENLELGRVVAEK--- 519
Query: 365 DLYAFG 370
LY G
Sbjct: 520 -LYGMG 524
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 169/608 (27%), Positives = 291/608 (47%), Gaps = 39/608 (6%)
Query: 38 HCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHS 97
+ DG +A+ L + + +Y+++L+ C G ++ K +
Sbjct: 81 YTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRG 140
Query: 98 DRFVGNSLLTLYLKLG--------------PH----------------LPQAQTLFDSLA 127
D + NS++ +Y+K G P + +A TLF +
Sbjct: 141 DVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMP 200
Query: 128 VRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGAC 187
++++W LIS + G P +L+ +M + + F + + A S L +G
Sbjct: 201 QPNVVSWNCLISGFVDKGSP-RALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQ 259
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEP--EDVVGWTAIISTLTR 245
LH V+ G S+ SAL+DMY ++ A +F + V W +++S
Sbjct: 260 LHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLI 319
Query: 246 NDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV 305
N+ AL L + +++ L D +T L C N LR G ++H+ VV G + +
Sbjct: 320 NEENEAALWLLLQIYQS-DLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYI 378
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRER---G 362
V S L+D++ G + A +F RL +K+ ++++ ++ ++ F L RE G
Sbjct: 379 VGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLG 438
Query: 363 V-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
+ +D + +L+ CS +A++ GK++H ++KG + + +ALVD+Y KCG +D
Sbjct: 439 LDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGV 498
Query: 422 RLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG 481
LF M R+ ++W +I G QNGR E F MI G+EP+ +TF+G+L AC H+G
Sbjct: 499 VLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSG 558
Query: 482 LVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVL 541
L++E R M EYG++P +EHY C++DLLG+A + +EA L+ D ++W L
Sbjct: 559 LLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSL 618
Query: 542 LGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
L AC + +A K+++ PD Y L N Y +G W+ ++R+ + G K
Sbjct: 619 LTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAK 678
Query: 602 KLPGKSWI 609
+ G SWI
Sbjct: 679 E-SGMSWI 685
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 144/470 (30%), Positives = 233/470 (49%), Gaps = 43/470 (9%)
Query: 66 LYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDS 125
L A+ L+ C K +F G ++ AH +K GI + F+ N+++++Y+ L A +FD
Sbjct: 7 LIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDF-RLLSDAHKVFDE 65
Query: 126 LAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDME-PNAFTISSVITAASKLRDLAL 184
++ R+I+ WT+++S YT G+P +++L+ +MLD + E N F S+V+ A + D+ L
Sbjct: 66 MSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQL 125
Query: 185 GACLHAMVISRGFHSNTVISSALVDMYGRN-RAVR------------------------- 218
G ++ + + V+ +++VDMY +N R +
Sbjct: 126 GILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCK 185
Query: 219 -----DALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFG 273
+A+ LF P+P +VV W +IS R AL V M R GLV DGF
Sbjct: 186 AGLMDEAVTLFHRMPQP-NVVSWNCLISGFVDKGSPR-ALEFLVRMQRE-GLVLDGFALP 242
Query: 274 TLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVF--DRLG 331
L AC+ G L GK+LH VV G+ + S+L+DMY CG + A VF ++L
Sbjct: 243 CGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLA 302
Query: 332 DKNSVS-WTAMLSAYCQNKEYEAVFELVRERGVSDL----YAFGTVLRACSGVAAVMLGK 386
+SV+ W +MLS + N+E EA L+ + SDL Y L+ C + LG
Sbjct: 303 VNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGL 362
Query: 387 EVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNG 446
+VH V G D IV S LVDL+A G + A +LF + ++ I ++ +I G ++G
Sbjct: 363 QVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSG 422
Query: 447 RGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDE 496
+ LF ++IK G++ D +L CS + G++ L + +
Sbjct: 423 FNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKK 472
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 3/186 (1%)
Query: 363 VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQR 422
V DL LR C V A G+ + +++G ++V + + ++ +Y + A +
Sbjct: 2 VMDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHK 61
Query: 423 LFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGME-PDYITFIGVLFACSHTG 481
+F M RN +TW M+ G +G+ + +EL+ M+ E + + VL AC G
Sbjct: 62 VFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVG 121
Query: 482 LVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVL 541
+ G + + E ++ V N ++D+ + + EA S + R + W L
Sbjct: 122 DIQLGILVYERIGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTL 179
Query: 542 LGACTK 547
+ K
Sbjct: 180 ISGYCK 185
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 173/614 (28%), Positives = 296/614 (48%), Gaps = 74/614 (12%)
Query: 35 ILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSG 94
++ + + G+ +A+ L Q + + LLQ C+ F G +H + L+ G
Sbjct: 61 VMVNLRSGNWEKAVELFREMQFSGAKAYDSTM-VKLLQVCSNKEGFAEGRQIHGYVLRLG 119
Query: 95 IHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLF 154
+ S+ + NSL+ +Y + G L ++ +F+S+ R++ +W S++S+YT+ G +++ L
Sbjct: 120 LESNVSMCNSLIVMYSRNGK-LELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLL 178
Query: 155 SQM-----------------------LDLD------------MEPNAFTISSVITAASKL 179
+M L D ++P+ +ISS++ A ++
Sbjct: 179 DEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEP 238
Query: 180 RDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAI 239
L LG +H ++ + + + L+DMY + + A +FD + +++V W ++
Sbjct: 239 GHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFD-MMDAKNIVAWNSL 297
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG 299
+S L+ + ++A L + M + G+ PD T+ +L + A LG
Sbjct: 298 VSGLSYACLLKDAEALMIRMEKE-GIKPDAITWNSLASGYATLG---------------- 340
Query: 300 ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYE---AVFE 356
LD+ GK + G A N VSWTA+ S +N + VF
Sbjct: 341 ------KPEKALDVIGKMKEKGVA---------PNVVSWTAIFSGCSKNGNFRNALKVFI 385
Query: 357 LVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCG 415
++E GV + T+L+ ++ + GKEVH +RK D V +ALVD+Y K G
Sbjct: 386 KMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSG 445
Query: 416 CVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLF 475
+ A +F ++ ++ +WN M+ G A GRG E + F M++ GMEPD ITF VL
Sbjct: 446 DLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLS 505
Query: 476 ACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDH 535
C ++GLV EG +YF LM YGI P +EH +CM+DLLGR+ ++EA ++ + D
Sbjct: 506 VCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDA 565
Query: 536 SLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLM 595
++W L +C D AE +++ LEP +Y+++ N+Y + RW D IR LM
Sbjct: 566 TIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLM 625
Query: 596 EDRGVKKLPGKSWI 609
+ V+ SWI
Sbjct: 626 RNNRVRVQDLWSWI 639
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 174/360 (48%), Gaps = 43/360 (11%)
Query: 184 LGACLHAMVISRGF-HSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIST 242
LG +H +I RG +S+T + SA + YGR ++ A KLFDE P+ +D+ W I+
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDL-AWNEIVMV 63
Query: 243 LTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICG 302
R+ + +A+ LF M D T LL C+N +G+++H V+ LG+
Sbjct: 64 NLRSGNWEKAVELFREMQFSGAKAYDS-TMVKLLQVCSNKEGFAEGRQIHGYVLRLGLES 122
Query: 303 NVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQ--------------- 347
NV + +SL+ MY + GK+ +R VF+ + D+N SW ++LS+Y +
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 348 -----------------------NKEYEAVFELVRERGVS-DLYAFGTVLRACSGVAAVM 383
+K+ AV + ++ G+ + ++L+A + +
Sbjct: 183 ICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLK 242
Query: 384 LGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLA 443
LGK +H +R W DV VE+ L+D+Y K G + +A+ +F M+ +N + WN+++ GL+
Sbjct: 243 LGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLS 302
Query: 444 QNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGV 503
+ L M KEG++PD IT+ + + G ++ M E G+ P V
Sbjct: 303 YACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM-KEKGVAPNV 361
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 193/448 (43%), Gaps = 80/448 (17%)
Query: 83 GTTLHAHALKSGI-HSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAY 141
G T+H +K G+ +SD V ++ + Y + L A LFD + RD +AW ++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRC-VSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 142 TRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNT 201
R+G +++LF +M + T+ ++ S A G +H V+ G SN
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 202 VISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHR 261
+ ++L+ MY RN + + K+F+ S + ++ W +I+S+ T+ +A+ L M
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFN-SMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 262 GCGLVPDGFTFGTLLA-----------------------------------ACANLGWLR 286
CGL PD T+ +LL+ A A G L+
Sbjct: 184 -CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLK 242
Query: 287 QGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAM---LS 343
GK +H ++ + +V VE++L+DMY K G + AR+VFD + KN V+W ++ LS
Sbjct: 243 LGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLS 302
Query: 344 AYCQNKEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIV 403
C K+ EA+ + + G+ D I
Sbjct: 303 YACLLKDAEALMIRMEKEGIKP----------------------------------DAIT 328
Query: 404 ESALVDLYAKCGCVDFAQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMI 459
++L YA G + A + M+ + N ++W A+ G ++NG L++F M
Sbjct: 329 WNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ 388
Query: 460 KEGMEPDYITFIGVLFACSHTGLVDEGR 487
+EG+ P+ T +L L+ G+
Sbjct: 389 EEGVGPNAATMSTLLKILGCLSLLHSGK 416
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/461 (32%), Positives = 243/461 (52%), Gaps = 36/461 (7%)
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRND 247
++A +I G ++ + + +VD + + A +LF++ P +V + +II T N
Sbjct: 29 INASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNP-NVFLYNSIIRAYTHNS 87
Query: 248 MFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVE 307
++ + +R++ + R +PD FTF + +CA+LG GK++H + G +VV E
Sbjct: 88 LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE 147
Query: 308 SSLLDMYGKCGKVGQARVVFD------------------RLG-------------DKNSV 336
++L+DMY K + A VFD RLG DK V
Sbjct: 148 NALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIV 207
Query: 337 SWTAMLSAYCQNKEYEAVFELVRERGVS----DLYAFGTVLRACSGVAAVMLGKEVHCQY 392
SWTAM+S Y Y + RE ++ D + +VL +C+ + ++ LGK +H
Sbjct: 208 SWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267
Query: 393 VRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVL 452
R+G + V +AL+++Y+KCG + A +LF ME ++ I+W+ MI G A +G +
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327
Query: 453 ELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDL 512
E F +M + ++P+ ITF+G+L ACSH G+ EG RYF +M +Y I+P +EHY C+ID+
Sbjct: 328 ETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387
Query: 513 LGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSY 572
L RA +E A + + + D +W LL +C + A ++ELEP+ +Y
Sbjct: 388 LARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNY 447
Query: 573 VLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSEN 613
VLL NIY +G+W D +RK++ + +KK PG S I N
Sbjct: 448 VLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNN 488
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 147/320 (45%), Gaps = 54/320 (16%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
+ + ++C S G +H H K G N+L+ +Y+K L A +FD +
Sbjct: 112 FPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDD-LVDAHKVFDEM 170
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLD----------------------LD--- 161
RD+I+W SL+S Y R G+ + LF MLD +D
Sbjct: 171 YERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFR 230
Query: 162 ------MEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNR 215
+EP+ ++ SV+ + ++L L LG +H RGF T + +AL++MY +
Sbjct: 231 EMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCG 290
Query: 216 AVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTL 275
+ A++LF + E +DV+ W+ +IS + A+ F M R + P+G TF L
Sbjct: 291 VISQAIQLFGQM-EGKDVISWSTMISGYAYHGNAHGAIETFNEMQRA-KVKPNGITFLGL 348
Query: 276 LAACANLG-W---------LRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARV 325
L+AC+++G W +RQ ++ K+ G L+D+ + GK+ +A
Sbjct: 349 LSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYG---------CLIDVLARAGKLERAVE 399
Query: 326 VFDRLGDK-NSVSWTAMLSA 344
+ + K +S W ++LS+
Sbjct: 400 ITKTMPMKPDSKIWGSLLSS 419
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 172/386 (44%), Gaps = 42/386 (10%)
Query: 119 AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDME-PNAFTISSVITAAS 177
A LF+ ++ ++ + S+I AYT + ++++ Q+L E P+ FT + + +
Sbjct: 61 ATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCA 120
Query: 178 KLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPE-------- 229
L LG +H + G + V +AL+DMY + + DA K+FDE E
Sbjct: 121 SLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNS 180
Query: 230 ----------------------PEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVP 267
+ +V WTA+IS T + EA+ F M G+ P
Sbjct: 181 LLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLA-GIEP 239
Query: 268 DGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVF 327
D + ++L +CA LG L GK +H G V ++L++MY KCG + QA +F
Sbjct: 240 DEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLF 299
Query: 328 DRLGDKNSVSWTAMLSAYCQNKE----YEAVFELVRERGVSDLYAFGTVLRACSGVAAVM 383
++ K+ +SW+ M+S Y + E E+ R + + F +L ACS V
Sbjct: 300 GQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQ 359
Query: 384 LGKEVHCQYVRKGGWRDVIVE--SALVDLYAKCGCVDFAQRLFLSMEVR-NQITWNAMIG 440
G + +R+ + +E L+D+ A+ G ++ A + +M ++ + W +++
Sbjct: 360 EGLR-YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLS 418
Query: 441 GLAQNGRGTEVLELFEDMIKEGMEPD 466
G L + +++ +EP+
Sbjct: 419 SCRTPGNLDVALVAMDHLVE--LEPE 442
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 158/510 (30%), Positives = 256/510 (50%), Gaps = 48/510 (9%)
Query: 145 GRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVIS 204
GR N+ FS++ + +SS+I+ +L +H V+ +G + I
Sbjct: 29 GRTSNNSGTFSEISN----QKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYIL 84
Query: 205 SALVDMYGRNRAVRDAL-KLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGC 263
+ L+ + D + E + + WTA+I F EA+ ++ M R
Sbjct: 85 TKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCM-RKE 143
Query: 264 GLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGL-GICGNVVVESSLLDMYGKCGKVGQ 322
+ P FTF LL AC + L G++ HA+ L G C V V ++++DMY KC +
Sbjct: 144 EITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCF-VYVGNTMIDMYVKCESIDC 202
Query: 323 ARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLYAFGTV---------- 372
AR VFD + +++ +SWT +++AY + E EL D+ A+ +
Sbjct: 203 ARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKP 262
Query: 373 -------------------------LRACSGVAAVMLGKEVHCQYVRKGGWRD---VIVE 404
+ AC+ + A Q +K G+ V++
Sbjct: 263 QEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRA-VQIAQKSGYSPSDHVVIG 321
Query: 405 SALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEG-M 463
SAL+D+Y+KCG V+ A +F+SM +N T+++MI GLA +GR E L LF M+ + +
Sbjct: 322 SALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEI 381
Query: 464 EPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAE 523
+P+ +TF+G L ACSH+GLVD+GR+ F M +G++P +HY CM+DLLGR ++EA
Sbjct: 382 KPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEAL 441
Query: 524 SLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVG 583
L++ +W LLGAC ++ AE A + ELEPD +Y+LL N+Y + G
Sbjct: 442 ELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAG 501
Query: 584 RWNDAMEIRKLMEDRGVKKLPGKSWIGSEN 613
W + +RKL++++G+KK P SW+ +N
Sbjct: 502 DWGGVLRVRKLIKEKGLKKTPAVSWVVDKN 531
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 204/449 (45%), Gaps = 45/449 (10%)
Query: 61 NLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLG-PHLPQA 119
N K +L +SL+ + +H H L+ G+ ++ L+ KLG P P A
Sbjct: 43 NQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYA 102
Query: 120 QTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKL 179
+ + + + R+ WT++I Y G+ ++ ++ M ++ P +FT S+++ A +
Sbjct: 103 RRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTM 162
Query: 180 RDLALGACLHAMVIS-RGFHSNTVISSALVDMYGRNRAVRDALKLFDESPE--------- 229
+DL LG HA RGF + + ++DMY + ++ A K+FDE PE
Sbjct: 163 KDLNLGRQFHAQTFRLRGF-CFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 230 ---------------------PEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPD 268
+D+V WTA+++ +N +EAL F M + G+ D
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKS-GIRAD 280
Query: 269 GFTFGTLLAACANLGWLRQGKEL--HAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVV 326
T ++ACA LG + A+ G +VV+ S+L+DMY KCG V +A V
Sbjct: 281 EVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNV 340
Query: 327 FDRLGDKNSVSWTAM---LSAYCQNKEYEAVFE-LVRERGVS-DLYAFGTVLRACSGVAA 381
F + +KN ++++M L+ + + +E +F +V + + + F L ACS
Sbjct: 341 FMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGL 400
Query: 382 VMLGKEVHCQYVRKGGWRDVIVE-SALVDLYAKCGCVDFAQRLFLSMEVRNQ-ITWNAMI 439
V G++V + G + + +VDL + G + A L +M V W A++
Sbjct: 401 VDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALL 460
Query: 440 GGLAQNGRGTEVLELFEDMIKEGMEPDYI 468
G + E+ E+ + + E +EPD I
Sbjct: 461 GA-CRIHNNPEIAEIAAEHLFE-LEPDII 487
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 163/540 (30%), Positives = 289/540 (53%), Gaps = 11/540 (2%)
Query: 78 SSFL---HGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAW 134
SSFL G T+H++ + GI + + SL+ Y + + A + +S +D+ W
Sbjct: 235 SSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSK-MEDAVRVLNSSGEQDVFLW 293
Query: 135 TSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVIS 194
TS++S + R R ++ F +M L ++PN FT S++++ S +R L G +H+ I
Sbjct: 294 TSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIK 353
Query: 195 RGFHSNTVISSALVDMYGRNRAVR-DALKLFDESPEPEDVVGWTAIISTLTRNDMFREAL 253
GF +T + +ALVDMY + A +A ++F P +VV WT +I L + ++
Sbjct: 354 VGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSP-NVVSWTTLILGLVDHGFVQDCF 412
Query: 254 RLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDM 313
L + M + + P+ T +L AC+ L +R+ E+HA ++ + G +VV +SL+D
Sbjct: 413 GLLMEMVKR-EVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDA 471
Query: 314 YGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYE---AVFELVRERGVS-DLYAF 369
Y KV A V + ++++++T++++ + + ++E +V + G+ D +
Sbjct: 472 YASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSL 531
Query: 370 GTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEV 429
+ A + + A+ GK +HC V+ G V ++LVD+Y+KCG ++ A+++F +
Sbjct: 532 PGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT 591
Query: 430 RNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRY 489
+ ++WN ++ GLA NG + L FE+M + EPD +TF+ +L ACS+ L D G Y
Sbjct: 592 PDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEY 651
Query: 490 FALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCS 549
F +M Y I+P VEHY ++ +LGRA +EEA ++E + + ++ LL AC
Sbjct: 652 FQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRG 711
Query: 550 DYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
+ E +A K + L P Y+LL ++Y G+ A + R LM ++ + K GKS +
Sbjct: 712 NLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTV 771
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/414 (34%), Positives = 236/414 (57%), Gaps = 10/414 (2%)
Query: 70 LLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVR 129
+L C SS + G +H +K G+ + + N+LL+LYLK + A+ LFD ++ R
Sbjct: 30 ILSFCESNSSRI-GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDG-IWNARKLFDEMSHR 87
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
+ AWT +ISA+T++ ++L LF +M+ PN FT SSV+ + + LRD++ G +H
Sbjct: 88 TVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVH 147
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMF 249
VI GF N+V+ S+L D+Y + ++A +LF S + D + WT +IS+L +
Sbjct: 148 GSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFS-SLQNADTISWTMMISSLVGARKW 206
Query: 250 REALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESS 309
REAL+ + M + G+ P+ FTF LL A + LG L GK +H+ ++ GI NVV+++S
Sbjct: 207 REALQFYSEMVKA-GVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTS 264
Query: 310 LLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRERGVS-D 365
L+D Y + K+ A V + G+++ WT+++S + +N KE F +R G+ +
Sbjct: 265 LVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPN 324
Query: 366 LYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDF-AQRLF 424
+ + +L CS V ++ GK++H Q ++ G V +ALVD+Y KC + A R+F
Sbjct: 325 NFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVF 384
Query: 425 LSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACS 478
+M N ++W +I GL +G + L +M+K +EP+ +T GVL ACS
Sbjct: 385 GAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 135/466 (28%), Positives = 243/466 (52%), Gaps = 10/466 (2%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
++S++++C +G +H +K+G + VG+SL LY K G +A LF SL
Sbjct: 127 FSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCG-QFKEACELFSSL 185
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
D I+WT +IS+ A + +LQ +S+M+ + PN FT ++ A+S L L G
Sbjct: 186 QNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-GLEFGK 244
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
+H+ +I RG N V+ ++LVD Y + + DA+++ + S E +DV WT+++S RN
Sbjct: 245 TIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGE-QDVFLWTSVVSGFVRN 303
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
+EA+ F+ M R GL P+ FT+ +L+ C+ + L GK++H++ + +G + V
Sbjct: 304 LRAKEAVGTFLEM-RSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDV 362
Query: 307 ESSLLDMYGKCGKVG-QARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVF----ELVRER 361
++L+DMY KC +A VF + N VSWT ++ + + F E+V+
Sbjct: 363 GNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE 422
Query: 362 GVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
++ VLRACS + V E+H +R+ +++V ++LVD YA VD+A
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAW 482
Query: 422 RLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG 481
+ SM+ R+ IT+ +++ + G+ L + M +G+ D ++ G + A ++ G
Sbjct: 483 NVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLG 542
Query: 482 LVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLE 527
++ G+ V G N ++D+ + +E+A+ + E
Sbjct: 543 ALETGKHLHCYSVKS-GFSGAASVLNSLVDMYSKCGSLEDAKKVFE 587
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 203/423 (47%), Gaps = 25/423 (5%)
Query: 184 LGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTL 243
+G +H VI G N + + L+ +Y + + +A KLFDE V WT +IS
Sbjct: 41 IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSH-RTVFAWTVMISAF 99
Query: 244 TRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGN 303
T++ F AL LF M G P+ FTF +++ +CA L + G +H V+ G GN
Sbjct: 100 TKSQEFASALSLFEEM-MASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGN 158
Query: 304 VVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVF----ELVR 359
VV SSL D+Y KCG+ +A +F L + +++SWT M+S+ +++ E+V+
Sbjct: 159 SVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVK 218
Query: 360 ERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDF 419
+ + F +L A S + GK +H + +G +V+++++LVD Y++ ++
Sbjct: 219 AGVPPNEFTFVKLLGA-SSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMED 277
Query: 420 AQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSH 479
A R+ S ++ W +++ G +N R E + F +M G++P+ T+ +L CS
Sbjct: 278 AVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSA 337
Query: 480 TGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWA 539
+D G++ + + + G + + N ++D+ + E S + A + W
Sbjct: 338 VRSLDFGKQIHSQTI-KVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWT 396
Query: 540 VLL------GACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRK 593
L+ G C + E V R E+EP+ V L + RA + +R+
Sbjct: 397 TLILGLVDHGFVQDCFGLLM-EMVKR---EVEPNV----VTLSGVLRACSKLR---HVRR 445
Query: 594 LME 596
++E
Sbjct: 446 VLE 448
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 197/413 (47%), Gaps = 16/413 (3%)
Query: 58 LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLP 117
L PN Y+++L C+ S G +H+ +K G VGN+L+ +Y+K
Sbjct: 321 LQPN--NFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEV 378
Query: 118 QAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAAS 177
+A +F ++ ++++WT+LI G + L +M+ ++EPN T+S V+ A S
Sbjct: 379 EASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
Query: 178 KLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWT 237
KLR + +HA ++ R V+ ++LVD Y +R V A + S + D + +T
Sbjct: 439 KLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVI-RSMKRRDNITYT 497
Query: 238 AIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVG 297
++++ AL + M+ G G+ D + ++A ANLG L GK LH V
Sbjct: 498 SLVTRFNELGKHEMALSVINYMY-GDGIRMDQLSLPGFISASANLGALETGKHLHCYSVK 556
Query: 298 LGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAV 354
G G V +SL+DMY KCG + A+ VF+ + + VSW ++S N +
Sbjct: 557 SGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSA 616
Query: 355 FELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVES--ALVDLY 411
FE +R + D F +L ACS LG E + Q ++K + VE LV +
Sbjct: 617 FEEMRMKETEPDSVTFLILLSACSNGRLTDLGLE-YFQVMKKIYNIEPQVEHYVHLVGIL 675
Query: 412 AKCGCVDFAQRLFLSMEVRNQITWNAMI-GGLAQNGRGTEVLELFEDMIKEGM 463
+ G ++ A + +M ++ NAMI L + R L L EDM +G+
Sbjct: 676 GRAGRLEEATGVVETMHLKP----NAMIFKTLLRACRYRGNLSLGEDMANKGL 724
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 134/257 (52%), Gaps = 7/257 (2%)
Query: 286 RQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAY 345
R G +H V+ G+ N+ + ++LL +Y K + AR +FD + + +WT M+SA+
Sbjct: 40 RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAF 99
Query: 346 CQNKEYEAVFELVRERGVS----DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDV 401
+++E+ + L E S + + F +V+R+C+G+ + G VH ++ G +
Sbjct: 100 TKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNS 159
Query: 402 IVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKE 461
+V S+L DLY+KCG A LF S++ + I+W MI L + E L+ + +M+K
Sbjct: 160 VVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKA 219
Query: 462 GMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEE 521
G+ P+ TF+ +L A S GL + G+ + ++ GI V ++D + +E+
Sbjct: 220 GVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVR-GIPLNVVLKTSLVDFYSQFSKMED 277
Query: 522 AESLLENADCRYDHSLW 538
A +L N+ D LW
Sbjct: 278 AVRVL-NSSGEQDVFLW 293
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 114/232 (49%), Gaps = 5/232 (2%)
Query: 50 LLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLY 109
L+ + ++PN+ V + +L+ C+K +HA+ L+ + + VGNSL+ Y
Sbjct: 415 LMEMVKREVEPNV--VTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAY 472
Query: 110 LKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTI 169
+ A + S+ RD I +TSL++ + G+ +L + + M + + ++
Sbjct: 473 AS-SRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSL 531
Query: 170 SSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPE 229
I+A++ L L G LH + GF + ++LVDMY + ++ DA K+F+E
Sbjct: 532 PGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT 591
Query: 230 PEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACAN 281
P DVV W ++S L N AL F M R PD TF LL+AC+N
Sbjct: 592 P-DVVSWNGLVSGLASNGFISSALSAFEEM-RMKETEPDSVTFLILLSACSN 641
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 164/542 (30%), Positives = 292/542 (53%), Gaps = 37/542 (6%)
Query: 103 NSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDM 162
N L++ Y+K G + +A+ +FD + R++++WT+L+ Y G+ + LF +M
Sbjct: 83 NGLVSGYMKNG-EIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM----- 136
Query: 163 EPNAFTISSVITAASKLRDLALG-AC-LHAMVISRGFHSNTVISSALVDMYGRNRAVRDA 220
P +S + L+D + AC L+ M+ + + + ++++ + V +A
Sbjct: 137 -PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEA 191
Query: 221 LKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACA 280
++FDE E V+ WT +++ +N+ +A ++F M + ++ ++L
Sbjct: 192 REIFDEMSE-RSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV-----SWTSMLMGYV 245
Query: 281 NLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTA 340
G + +EL + V+ ++++ G+ G++ +AR VFD + ++N SW
Sbjct: 246 QNGRIEDAEELFE----VMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQT 301
Query: 341 MLSAYCQNK-EYEAV--FELVRERGVSDLY-AFGTVLRACSGVAAVMLGKEVHCQYVRKG 396
++ + +N E EA+ F L++++GV + ++L C+ +A++ GK+VH Q VR
Sbjct: 302 VIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361
Query: 397 GWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFE 456
DV V S L+ +Y KCG + ++ +F ++ I WN++I G A +G G E L++F
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFC 421
Query: 457 DMIKEG-MEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGR 515
+M G +P+ +TF+ L ACS+ G+V+EG + + M +G+KP HY CM+D+LGR
Sbjct: 422 EMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGR 481
Query: 516 AEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLL 575
A EA ++++ D ++W LLGAC S AE A+K+IE+EP+ +Y+LL
Sbjct: 482 AGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILL 541
Query: 576 GNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQKGSLSGLANVNVFERSSVSSI 635
N+Y + GRW D E+RKLM+ R V+K PG SW EN+ V+ F R ++S
Sbjct: 542 SNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENK---------VHAFTRGGINSH 592
Query: 636 GE 637
E
Sbjct: 593 PE 594
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 175/395 (44%), Gaps = 58/395 (14%)
Query: 102 GNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLD 161
N +T ++G + +A+ LFDS + I +W S+++ Y P ++ +LF +M D
Sbjct: 20 ANVRITHLSRIG-KIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR- 77
Query: 162 MEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDAL 221
N + + +++ K ++ + ++ R N V +ALV Y N V A
Sbjct: 78 ---NIISWNGLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAE 130
Query: 222 KLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFG--TLLAAC 279
LF + PE ++ V WT ++ ++ +A +L+ ++PD +++
Sbjct: 131 SLFWKMPE-KNKVSWTVMLIGFLQDGRIDDACKLY-------EMIPDKDNIARTSMIHGL 182
Query: 280 ANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWT 339
G + + +E+ ++ +V+ ++++ YG+ +V AR +FD + +K VSWT
Sbjct: 183 CKEGRVDEAREIFDEMSE----RSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWT 238
Query: 340 AMLSAYCQNKEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR 399
+ML Y QN E EL V +
Sbjct: 239 SMLMGYVQNGRIEDAEELFEVMPV-----------------------------------K 263
Query: 400 DVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMI 459
VI +A++ + G + A+R+F SM+ RN +W +I +NG E L+LF M
Sbjct: 264 PVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQ 323
Query: 460 KEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMV 494
K+G+ P + T I +L C+ + G++ A +V
Sbjct: 324 KQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV 358
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 155/358 (43%), Gaps = 59/358 (16%)
Query: 188 LHAMVISRGFHSNTV---ISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLT 244
+ + ++ R +S T+ ++ + R + +A KLFD S + + + W ++++
Sbjct: 1 MKSQILLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFD-SCDSKSISSWNSMVAGYF 59
Query: 245 RNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNV 304
N M R+A +LF M PD N+
Sbjct: 60 ANLMPRDARKLFDEM-------PDR---------------------------------NI 79
Query: 305 VVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVS 364
+ + L+ Y K G++ +AR VFD + ++N VSWTA++ Y N + + L +
Sbjct: 80 ISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK 139
Query: 365 DLYAFGTVLRACSGVAAVMLGK-EVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRL 423
+ ++ +L + + G+ + C+ +D I ++++ K G VD A+ +
Sbjct: 140 NKVSWTVML-----IGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREI 194
Query: 424 FLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLV 483
F M R+ ITW M+ G QN R + ++F D++ E E +++ +L G +
Sbjct: 195 FDEMSERSVITWTTMVTGYGQNNRVDDARKIF-DVMPEKTE---VSWTSMLMGYVQNGRI 250
Query: 484 DEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVL 541
++ F +M +KP V N MI LG+ I +A + ++ R D S V+
Sbjct: 251 EDAEELFEVM----PVKP-VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVI 303
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 6/206 (2%)
Query: 38 HCKDGSLRQALHLLNTSQTT-LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIH 96
H ++G +AL L Q + P ++ S+L C +S HG +HA ++
Sbjct: 306 HERNGFELEALDLFILMQKQGVRPTFPTLI--SILSVCASLASLHHGKQVHAQLVRCQFD 363
Query: 97 SDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQ 156
D +V + L+T+Y+K G L +++ +FD +DII W S+IS Y G +L++F +
Sbjct: 364 VDVYVASVLMTMYIKCG-ELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCE 422
Query: 157 M-LDLDMEPNAFTISSVITAASKLRDLALGACLH-AMVISRGFHSNTVISSALVDMYGRN 214
M L +PN T + ++A S + G ++ +M G T + +VDM GR
Sbjct: 423 MPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRA 482
Query: 215 RAVRDALKLFDESPEPEDVVGWTAII 240
+A+++ D D W +++
Sbjct: 483 GRFNEAMEMIDSMTVEPDAAVWGSLL 508
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 36/260 (13%)
Query: 316 KCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRERGVSDLYAFGTV 372
+ GK+ +AR +FD K+ SW +M++ Y N ++ +F+ + +R +
Sbjct: 29 RIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGL--- 85
Query: 373 LRACSGVAAVMLGKEVHCQYVRK----GGWRDVIVESALVDLYAKCGCVDFAQRLFLSME 428
V+ M E+ RK R+V+ +ALV Y G VD A+ LF M
Sbjct: 86 ------VSGYMKNGEI--DEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP 137
Query: 429 VRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRR 488
+N+++W M+ G Q+GR + +L+E MI + D I ++ G VDE R
Sbjct: 138 EKNKVSWTVMLIGFLQDGRIDDACKLYE-MIP---DKDNIARTSMIHGLCKEGRVDEARE 193
Query: 489 YFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKC 548
F M + I + M+ G+ +++A + + + + S ++L+G
Sbjct: 194 IFDEMSERSVIT-----WTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMG----- 243
Query: 549 SDYVTAERV--ARKMIELEP 566
YV R+ A ++ E+ P
Sbjct: 244 --YVQNGRIEDAEELFEVMP 261
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 148/433 (34%), Positives = 237/433 (54%), Gaps = 8/433 (1%)
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRND 247
+HA+V+ GF + + L++ + A ++FDE +P + W + RN
Sbjct: 30 IHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPR-IFLWNTLFKGYVRNQ 88
Query: 248 MFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVE 307
+ E+L L+ M R G+ PD FT+ ++ A + LG G LHA VV G +V
Sbjct: 89 LPFESLLLYKKM-RDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 308 SSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVS--- 364
+ L+ MY K G++ A +F+ + K+ V+W A L+ Q E +
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 365 -DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRL 423
D + ++L AC + ++ +G+E++ + ++ ++IVE+A +D++ KCG + A+ L
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 424 FLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLV 483
F M+ RN ++W+ MI G A NG E L LF M EG+ P+Y+TF+GVL ACSH GLV
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327
Query: 484 DEGRRYFALMV--DEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVL 541
+EG+RYF+LMV ++ ++P EHY CM+DLLGR+ ++EEA ++ D +W L
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGAL 387
Query: 542 LGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
LGAC D + ++VA ++E PD +VLL NIY A G+W+ ++R M G K
Sbjct: 388 LGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTK 447
Query: 602 KLPGKSWIGSENQ 614
K+ S + E +
Sbjct: 448 KVAAYSSVEFEGK 460
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 178/371 (47%), Gaps = 21/371 (5%)
Query: 86 LHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAG 145
+HA L++G + LL + +G + A+ +FD + I W +L Y R
Sbjct: 30 IHAIVLRTGFSEKNSLLTQLLENLVVIGD-MCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88
Query: 146 RPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISS 205
P SL L+ +M DL + P+ FT V+ A S+L D + G LHA V+ GF ++++
Sbjct: 89 LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVAT 148
Query: 206 ALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGC-- 263
LV MY + + A LF ES + +D+V W A ++ + AL F M C
Sbjct: 149 ELVMMYMKFGELSSAEFLF-ESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM---CAD 204
Query: 264 GLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQA 323
+ D FT ++L+AC LG L G+E++ + I N++VE++ LDM+ KCG A
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAA 264
Query: 324 RVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRERGVSDLY-AFGTVLRACSGV 379
RV+F+ + +N VSW+ M+ Y N +E +F ++ G+ Y F VL ACS
Sbjct: 265 RVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHA 324
Query: 380 AAVMLGKEVHCQYVRKGGWRDVIVE------SALVDLYAKCGCVDFAQRLFLSMEVRNQI 433
V GK V+ D +E + +VDL + G ++ A M V
Sbjct: 325 GLVNEGKRYFSLMVQSN---DKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDT 381
Query: 434 -TWNAMIGGLA 443
W A++G A
Sbjct: 382 GIWGALLGACA 392
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 171/365 (46%), Gaps = 54/365 (14%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
Y +++ ++ F G LHAH +K G V L+ +Y+K G L A+ LF+S+
Sbjct: 112 YPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFG-ELSSAEFLFESM 170
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
V+D++AW + ++ + G +L+ F++M ++ ++FT+ S+++A +L L +G
Sbjct: 171 QVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGE 230
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
++ N ++ +A +DM+ + A LF+E + +VV W+ +I N
Sbjct: 231 EIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQ-RNVVSWSTMIVGYAMN 289
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
REAL LF M GL P+ TF +L+AC++ G + +GK + ++V
Sbjct: 290 GDSREALTLFTTMQNE-GLRPNYVTFLGVLSACSHAGLVNEGKRYFS----------LMV 338
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVS-D 365
+S+ D+ + + M+ ++ E +E +++ V D
Sbjct: 339 QSN------------------DKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPD 380
Query: 366 LYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESA---------LVDLYAKCG- 415
+G +L AC+ ++LG++V DV+VE+A L ++YA G
Sbjct: 381 TGIWGALLGACAVHRDMILGQKV----------ADVLVETAPDIGSYHVLLSNIYAAAGK 430
Query: 416 --CVD 418
CVD
Sbjct: 431 WDCVD 435
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 4/209 (1%)
Query: 286 RQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAY 345
+Q K++HA V+ G + + LL+ G + AR VFD + W + Y
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGY 84
Query: 346 CQNK---EYEAVFELVRERGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDV 401
+N+ E +++ +R+ GV D + + V++A S + G +H V+ G
Sbjct: 85 VRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLG 144
Query: 402 IVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKE 461
IV + LV +Y K G + A+ LF SM+V++ + WNA + Q G LE F M +
Sbjct: 145 IVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCAD 204
Query: 462 GMEPDYITFIGVLFACSHTGLVDEGRRYF 490
++ D T + +L AC G ++ G +
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIY 233
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 227/399 (56%), Gaps = 8/399 (2%)
Query: 220 ALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAAC 279
A LF+ EP D+V + ++ +R E LFV + G++PD +TF +LL AC
Sbjct: 82 ARHLFEAMSEP-DIVIFNSMARGYSRFTNPLEVFSLFVEILED-GILPDNYTFPSLLKAC 139
Query: 280 ANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWT 339
A L +G++LH + LG+ NV V +L++MY +C V AR VFDR+ + V +
Sbjct: 140 AVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYN 199
Query: 340 AMLSAYCQNKEYEAVFELVRERGVSDL----YAFGTVLRACSGVAAVMLGKEVHCQYVRK 395
AM++ Y + L RE L +VL +C+ + ++ LGK +H +Y +K
Sbjct: 200 AMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIH-KYAKK 258
Query: 396 GGW-RDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLEL 454
+ + V V +AL+D++AKCG +D A +F M ++ W+AMI A +G+ + + +
Sbjct: 259 HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLM 318
Query: 455 FEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLG 514
FE M E ++PD ITF+G+L ACSHTG V+EGR+YF+ MV ++GI P ++HY M+DLL
Sbjct: 319 FERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLS 378
Query: 515 RAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVL 574
RA +E+A ++ LW +LL AC+ ++ AE+V+ ++ EL+ YV+
Sbjct: 379 RAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVI 438
Query: 575 LGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSEN 613
L N+Y +W +RK+M+DR K+PG S I N
Sbjct: 439 LSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNN 477
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 185/381 (48%), Gaps = 13/381 (3%)
Query: 75 TKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGP---HLPQAQTLFDSLAVRDI 131
+K +S + A+A+KS I FV L + P + A+ LF++++ DI
Sbjct: 37 SKCNSLRELMQIQAYAIKSHIEDVSFVAK--LINFCTESPTESSMSYARHLFEAMSEPDI 94
Query: 132 IAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAM 191
+ + S+ Y+R P+ LF ++L+ + P+ +T S++ A + + L G LH +
Sbjct: 95 VIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCL 154
Query: 192 VISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFRE 251
+ G N + L++MY V A +FD EP VV + A+I+ R + E
Sbjct: 155 SMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEP-CVVCYNAMITGYARRNRPNE 213
Query: 252 ALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLL 311
AL LF M +G L P+ T ++L++CA LG L GK +H C V V ++L+
Sbjct: 214 ALSLFREM-QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALI 272
Query: 312 DMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEA---VFELVRERGVS-DLY 367
DM+ KCG + A +F+++ K++ +W+AM+ AY + + E +FE +R V D
Sbjct: 273 DMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEI 332
Query: 368 AFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVE-SALVDLYAKCGCVDFAQRLFLS 426
F +L ACS V G++ Q V K G I ++VDL ++ G ++ A
Sbjct: 333 TFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDK 392
Query: 427 MEVR-NQITWNAMIGGLAQNG 446
+ + + W ++ + +
Sbjct: 393 LPISPTPMLWRILLAACSSHN 413
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 157/316 (49%), Gaps = 17/316 (5%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
+ SLL+ C + G LH ++K G+ + +V +L+ +Y + + A+ +FD +
Sbjct: 132 FPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTEC-EDVDSARCVFDRI 190
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
++ + ++I+ Y R RP +L LF +M ++PN T+ SV+++ + L L LG
Sbjct: 191 VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGK 250
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
+H F +++AL+DM+ + ++ DA+ +F E +D W+A+I +
Sbjct: 251 WIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIF-EKMRYKDTQAWSAMIVAYANH 309
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVG-LGICGNVV 305
+++ +F M R + PD TF LL AC++ G + +G++ +++V GI ++
Sbjct: 310 GKAEKSMLMFERM-RSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIK 368
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLG-DKNSVSWTAMLSAYCQN-------KEYEAVFEL 357
S++D+ + G + A D+L + W +L+A + K E +FEL
Sbjct: 369 HYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFEL 428
Query: 358 VRERG-----VSDLYA 368
G +S+LYA
Sbjct: 429 DDSHGGDYVILSNLYA 444
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 255 bits (652), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 164/477 (34%), Positives = 256/477 (53%), Gaps = 55/477 (11%)
Query: 182 LALGACLHAMVISRGFHS--NTVISSALVDMYGRNRAVRDALKLFDESPEPE-DVVGWTA 238
L G LHA++ + G + +S+AL Y + + A KLFDE P E D V WT
Sbjct: 22 LRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTT 81
Query: 239 IISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACA---NLGWLRQGKELHAKV 295
++S+ +R + +++LFV M R + D + L CA +LG+ +QG H
Sbjct: 82 LLSSFSRYGLLVNSMKLFVEMRRK-RVEIDDVSVVCLFGVCAKLEDLGFAQQG---HGVA 137
Query: 296 VGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK---------------------- 333
V +G+ +V V ++L+DMYGKCG V + + +F+ L +K
Sbjct: 138 VKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGR 197
Query: 334 ---------NSVSWTAMLSAYCQNKEYEAVFELVRERGVS-----DLYAFGTVLRACSGV 379
N+V+WT M++ Y V EL+ E + ++L AC+
Sbjct: 198 EVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQS 257
Query: 380 AAVMLGKEVHCQYVRK-------GGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQ 432
+++G+ VH ++K + DV+V +ALVD+YAKCG +D + +F M RN
Sbjct: 258 GNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNV 317
Query: 433 ITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFAL 492
+TWNA+ GLA +G+G V+++F MI+E ++PD +TF VL ACSH+G+VDEG R F
Sbjct: 318 VTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHS 376
Query: 493 MVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYV 552
+ YG++P V+HY CM+DLLGRA +IEEAE L+ + + LLG+C+
Sbjct: 377 L-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVE 435
Query: 553 TAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
AER+ R++I++ P +L+ N+Y A GR + A +R + RG++K+PG S I
Sbjct: 436 IAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSI 492
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 194/425 (45%), Gaps = 50/425 (11%)
Query: 70 LLQTCTKTSSFLHGTTLHAHALKSGIHS--DRFVGNSLLTLYLKLGPHLPQAQTLFDS-- 125
LL+ C S G LHA SG+ ++ N+L Y G + AQ LFD
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSG-EMVTAQKLFDEIP 70
Query: 126 LAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALG 185
L+ +D + WT+L+S+++R G +NS++LF +M +E + ++ + +KL DL
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTR 245
H + + G ++ + +AL+DMYG+ V + ++F+E E + VV WT ++ T+ +
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEE-LEEKSVVSWTVVLDTVVK 189
Query: 246 -------NDMF------------------------REALRLFVAMHRGCGLVPDGFTFGT 274
++F RE L L M CG + T +
Sbjct: 190 WEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCS 249
Query: 275 LLAACANLGWLRQGKELHAKVVGLGIC-------GNVVVESSLLDMYGKCGKVGQARVVF 327
+L+ACA G L G+ +H + + +V+V ++L+DMY KCG + + VF
Sbjct: 250 MLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVF 309
Query: 328 DRLGDKNSVSWTAMLSAYCQNKEYEAVF----ELVRERGVSDLYAFGTVLRACSGVAAVM 383
+ +N V+W A+ S + + V +++RE DL F VL ACS V
Sbjct: 310 RLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIREVKPDDL-TFTAVLSACSHSGIVD 368
Query: 384 LGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEV-RNQITWNAMIGGL 442
G G V + +VDL + G ++ A+ L M V N++ +++G
Sbjct: 369 EGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSC 428
Query: 443 AQNGR 447
+ +G+
Sbjct: 429 SVHGK 433
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 207/719 (28%), Positives = 332/719 (46%), Gaps = 131/719 (18%)
Query: 29 SSTDSEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHA 88
S+ ++ IL+ +G L A HLL+ N + V + SLL KT L
Sbjct: 43 SNEEALILRRLSEGGLVHARHLLDKIPQRGSIN-RVVYWTSLLSKYAKTGYLDEARVLFE 101
Query: 89 HALKSGIHSDRFVGNSLLTLYLK---------LGPHLPQ--------------------A 119
+ I N++LT Y+K L +P+ A
Sbjct: 102 VMPERNI----VTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDA 157
Query: 120 QTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEP-NAFTISSVITAASK 178
LFD + R++++W +L++ R G + Q+F M D+ NA + +
Sbjct: 158 VELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGME 217
Query: 179 LRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTA 238
L G N V +++V Y R VR+A +LF E PE ++V WTA
Sbjct: 218 EAKLLFGDM---------SEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPE-RNIVSWTA 267
Query: 239 IISTLTRNDMFREALRLFVAMHRGCGLV-PDGFTFGTLLAACANLG--WLRQGKELHAKV 295
+IS N+++REAL LF+ M + V P+G T +L AC LG + R G++LHA+V
Sbjct: 268 MISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQV 327
Query: 296 VGLGI-------------------CGNVVVESSLL-------------DMYGKCGKVGQA 323
+ G G + SLL + Y K G + +A
Sbjct: 328 ISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERA 387
Query: 324 RVVFDRLGD-KNSVSWTAMLSAYCQNKEYEAVFELVR----ERGVS-----------DLY 367
+F+R+ + VSWT+M+ Y + + F L + + GV+ +L+
Sbjct: 388 ETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELF 447
Query: 368 A--------------------FGTVLRACSGVAAVMLGKEVHCQYVRKGGWR--DVIVES 405
A + +L + + + GK +HC + D+I+++
Sbjct: 448 AEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQN 507
Query: 406 ALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEP 465
+LV +YAKCG ++ A +F M ++ ++WN+MI GL+ +G + L LF++M+ G +P
Sbjct: 508 SLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKP 567
Query: 466 DYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESL 525
+ +TF+GVL ACSH+GL+ G F M + Y I+PG++HY MIDLLGRA ++EAE
Sbjct: 568 NSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEF 627
Query: 526 LENADCRYDHSLWAVLLGAC-----TKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYR 580
+ DH+++ LLG C K ++ + AER A +++EL+P +V L N+Y
Sbjct: 628 ISALPFTPDHTVYGALLGLCGLNWRDKDAEGI-AERAAMRLLELDPVNAPGHVALCNVYA 686
Query: 581 AVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQKGSLSGLANVNVFERSSVSSIGEAV 639
+GR + E+RK M +GVKK PG SW+ ++G ANV + S S + V
Sbjct: 687 GLGRHDMEKEMRKEMGIKGVKKTPGCSWV-------VVNGRANVFLSGDKSASEAAQMV 738
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 150/460 (32%), Positives = 252/460 (54%), Gaps = 14/460 (3%)
Query: 164 PNAFTISSVITAASKLRDLALGACLHAMVISR-GFHSNTVISSALVDMYGRNRAVRDALK 222
P A+T ++ A + L G + +++++ N + S L+ ++ R + A K
Sbjct: 131 PEAYT--DLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARK 188
Query: 223 LFDESPEPEDVVG--WTAIISTLTRNDMFREALRLFVAMHRGCGLV-PDGFTFGTLLAAC 279
+FD+ + + W A+ +RN R+AL ++V M C + P F+ L AC
Sbjct: 189 IFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDML--CSFIEPGNFSISVALKAC 246
Query: 280 ANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWT 339
+L LR G+ +HA++V + VV + LL +Y + G AR VFD + ++N V+W
Sbjct: 247 VDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWN 306
Query: 340 AMLSAYCQNKEYEAVFELVRERGVSDLYAFG-----TVLRACSGVAAVMLGKEVHCQYVR 394
+++S + +F L R+ ++ F T+L ACS VAA++ GKE+H Q ++
Sbjct: 307 SLISVLSKKVRVHEMFNLFRKMQ-EEMIGFSWATLTTILPACSRVAALLTGKEIHAQILK 365
Query: 395 KGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLEL 454
DV + ++L+D+Y KCG V++++R+F M ++ +WN M+ A NG EV+ L
Sbjct: 366 SKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINL 425
Query: 455 FEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLG 514
FE MI+ G+ PD ITF+ +L CS TGL + G F M E+ + P +EHY C++D+LG
Sbjct: 426 FEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILG 485
Query: 515 RAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVL 574
RA I+EA ++E + S+W LL +C + E A+++ LEP +YV+
Sbjct: 486 RAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVM 545
Query: 575 LGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
+ NIY W++ +IR++M+ RGVKK G SW+ +++
Sbjct: 546 VSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDK 585
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 176/350 (50%), Gaps = 19/350 (5%)
Query: 40 KDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALK--SGIHS 97
K L +A+ L+ S ++ P Y LL C S HG + + L S H+
Sbjct: 107 KSTKLDEAVTLIENSSSSPSNLSTPEAYTDLLHACISAKSLHHGIKICSLILNNPSLRHN 166
Query: 98 DRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIA---WTSLISAYTRAGRPINSLQLF 154
+ + + L+TL+ + L A+ +FD + ++ W ++ Y+R G P ++L ++
Sbjct: 167 PKLL-SKLITLF-SVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVY 224
Query: 155 SQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRN 214
ML +EP F+IS + A L+DL +G +HA ++ R + V+ + L+ +Y +
Sbjct: 225 VDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMES 284
Query: 215 RAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGT 274
DA K+FD E +VV W ++IS L++ E LF M GF++ T
Sbjct: 285 GLFDDARKVFDGMSE-RNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEM----IGFSWAT 339
Query: 275 L---LAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLG 331
L L AC+ + L GKE+HA+++ +V + +SL+DMYGKCG+V +R VFD +
Sbjct: 340 LTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVML 399
Query: 332 DKNSVSWTAMLSAYCQNKEYEAV---FELVRERGVS-DLYAFGTVLRACS 377
K+ SW ML+ Y N E V FE + E GV+ D F +L CS
Sbjct: 400 TKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCS 449
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/454 (34%), Positives = 246/454 (54%), Gaps = 7/454 (1%)
Query: 165 NAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLF 224
N I ++ ++++ R G LH V+ G ++++ L++ Y +++ D+ + F
Sbjct: 14 NYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF 73
Query: 225 DESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGW 284
++SP+ + W++IIS +N++ +L M G L PD + +CA L
Sbjct: 74 EDSPQ-KSSTTWSSIISCFAQNELPWMSLEFLKKMMAG-NLRPDDHVLPSATKSCAILSR 131
Query: 285 LRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSA 344
G+ +H + G +V V SSL+DMY KCG++ AR +FD + +N V+W+ M+
Sbjct: 132 CDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYG 191
Query: 345 YCQNKEYEAVFELVRERGVSDL----YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRD 400
Y Q E E L +E +L Y+F +V+ C+ + LG+++H ++
Sbjct: 192 YAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSS 251
Query: 401 VIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIK 460
V S+LV LY+KCG + A ++F + V+N WNAM+ AQ+ +V+ELF+ M
Sbjct: 252 SFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKL 311
Query: 461 EGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIE 520
GM+P++ITF+ VL ACSH GLVDEGR YF M E I+P +HY ++D+LGRA ++
Sbjct: 312 SGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQ 370
Query: 521 EAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYR 580
EA ++ N S+W LL +CT + A A K+ EL P ++ L N Y
Sbjct: 371 EALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYA 430
Query: 581 AVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
A GR+ DA + RKL+ DRG KK G SW+ N+
Sbjct: 431 ADGRFEDAAKARKLLRDRGEKKETGLSWVEERNK 464
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 187/399 (46%), Gaps = 13/399 (3%)
Query: 70 LLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLP-QAQTLFDSLAV 128
LL + +T S + G LH + +KSG+ V N+L+ Y K LP ++ F+
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSK--SQLPFDSRRAFEDSPQ 78
Query: 129 RDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACL 188
+ W+S+IS + + P SL+ +M+ ++ P+ + S + + L +G +
Sbjct: 79 KSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSV 138
Query: 189 HAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDM 248
H + + G+ ++ + S+LVDMY + + A K+FDE P+ +VV W+ ++ +
Sbjct: 139 HCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQ-RNVVTWSGMMYGYAQMGE 197
Query: 249 FREALRLFV-AMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVE 307
EAL LF A+ L + ++F ++++ CAN L G+++H + + V
Sbjct: 198 NEEALWLFKEALFE--NLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVG 255
Query: 308 SSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVS--- 364
SSL+ +Y KCG A VF+ + KN W AML AY Q+ + V EL + +S
Sbjct: 256 SSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMK 315
Query: 365 -DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRL 423
+ F VL ACS V G+ Q ++LVD+ + G + A +
Sbjct: 316 PNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEV 375
Query: 424 FLSMEVR-NQITWNAMIGGLAQNGRGTEVLELFEDMIKE 461
+M + + W A++ + + TE+ D + E
Sbjct: 376 ITNMPIDPTESVWGALLTSCTVH-KNTELAAFAADKVFE 413
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 162/309 (52%), Gaps = 17/309 (5%)
Query: 61 NLKPVLYASLLQTCTKTSSFLH----GTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHL 116
NL+P + +L + TK+ + L G ++H ++K+G +D FVG+SL+ +Y K G +
Sbjct: 111 NLRPDDH--VLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCG-EI 167
Query: 117 PQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAA 176
A+ +FD + R+++ W+ ++ Y + G +L LF + L ++ N ++ SSVI+
Sbjct: 168 VYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVC 227
Query: 177 SKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGW 236
+ L LG +H + I F S++ + S+LV +Y + A ++F+E P +++ W
Sbjct: 228 ANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVP-VKNLGIW 286
Query: 237 TAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVV 296
A++ ++ ++ + LF M + G+ P+ TF +L AC++ G + +G+ ++
Sbjct: 287 NAMLKAYAQHSHTQKVIELFKRM-KLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMK 345
Query: 297 GLGICGNVVVESSLLDMYGKCGKVGQA-RVVFDRLGDKNSVSWTAMLSAYCQNKEYE--- 352
I +SL+DM G+ G++ +A V+ + D W A+L++ +K E
Sbjct: 346 ESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAA 405
Query: 353 ----AVFEL 357
VFEL
Sbjct: 406 FAADKVFEL 414
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 164/586 (27%), Positives = 299/586 (51%), Gaps = 22/586 (3%)
Query: 29 SSTDSEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHA 88
SS + + + +G + L L + + D + V AS LQ + G +H
Sbjct: 266 SSWGTMMAAYAHNGFFEEVLELFDLMRN-YDVRMNKVAAASALQAAAYVGDLVKGIAIHD 324
Query: 89 HALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPI 148
+A++ G+ D V SL+++Y K G L A+ LF ++ RD+++W+++I++Y +AG+
Sbjct: 325 YAVQQGLIGDVSVATSLMSMYSKCG-ELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHD 383
Query: 149 NSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALV 208
++ LF M+ + ++PNA T++SV+ + + LG +H I S ++A++
Sbjct: 384 EAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVI 443
Query: 209 DMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPD 268
MY + ALK F+ P +D V + A+ T+ +A ++ M G+ PD
Sbjct: 444 SMYAKCGRFSPALKAFERLP-IKDAVAFNALAQGYTQIGDANKAFDVYKNMKLH-GVCPD 501
Query: 269 GFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFD 328
T +L CA +G ++ +++ G V +L++M+ KC + A V+FD
Sbjct: 502 SRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFD 561
Query: 329 RLG-DKNSVSWTAMLSAYC---QNKEYEAVFELVR-ERGVSDLYAFGTVLRACSGVAAVM 383
+ G +K++VSW M++ Y Q +E A F ++ E+ + F ++RA + ++A+
Sbjct: 562 KCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALR 621
Query: 384 LGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLA 443
+G VH ++ G V ++LVD+YAKCG ++ +++ F+ + + ++WN M+ A
Sbjct: 622 VGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYA 681
Query: 444 QNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGV 503
+G + + LF M + ++PD ++F+ VL AC H GLV+EG+R F M + + I+ V
Sbjct: 682 AHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEV 741
Query: 504 EHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIE 563
EHY CM+DLLG+A + EA ++ + +W LL + + + ++++
Sbjct: 742 EHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVK 801
Query: 564 LEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
LEP Y + R +G N+ I KK+P SWI
Sbjct: 802 LEPLNPSHY----SQDRRLGEVNNVSRI---------KKVPACSWI 834
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/519 (26%), Positives = 258/519 (49%), Gaps = 18/519 (3%)
Query: 32 DSEILQHCKDGSLRQALHLLN--TSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAH 89
+S I + + G R+AL + + +DP+ +A L+ C + F G +H
Sbjct: 68 NSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFA--LKACAGSMDFKKGLRIHDL 125
Query: 90 ALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPIN 149
+ G+ SD ++G +L+ +Y K L A+ +FD + V+D++ W +++S + G
Sbjct: 126 IAEMGLESDVYIGTALVEMYCK-ARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSA 184
Query: 150 SLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVD 209
+L LF M ++ + ++ ++I A SKL + CLH +VI +GF SS L+D
Sbjct: 185 ALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF--IFAFSSGLID 242
Query: 210 MYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDG 269
MY + A +F+E +D W +++ N F E L LF M R + +
Sbjct: 243 MYCNCADLYAAESVFEEVWR-KDESSWGTMMAAYAHNGFFEEVLELFDLM-RNYDVRMNK 300
Query: 270 FTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDR 329
+ L A A +G L +G +H V G+ G+V V +SL+ MY KCG++ A +F
Sbjct: 301 VAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFIN 360
Query: 330 LGDKNSVSWTAMLSAYCQNKEYEAVFELVRE----RGVSDLYAFGTVLRACSGVAAVMLG 385
+ D++ VSW+AM+++Y Q +++ L R+ + +VL+ C+GVAA LG
Sbjct: 361 IEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLG 420
Query: 386 KEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQN 445
K +HC ++ ++ +A++ +YAKCG A + F + +++ + +NA+ G Q
Sbjct: 421 KSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQI 480
Query: 446 GRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEH 505
G + +++++M G+ PD T +G+L C+ G + ++ ++G
Sbjct: 481 GDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQII-KHGFDSECHV 539
Query: 506 YNCMIDLLGRAEMIEEAESLLENADCRYDHSL--WAVLL 542
+ +I++ + + + A L + C ++ S W +++
Sbjct: 540 AHALINMFTKCDALAAAIVLFDK--CGFEKSTVSWNIMM 576
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 222/446 (49%), Gaps = 19/446 (4%)
Query: 64 PVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLF 123
P+ Y +LL + +F +H + SG+ N L+ Y L ++ +F
Sbjct: 2 PINYTNLLLMLRECKNFRCLLQVHGSLIVSGLKPH----NQLINAY-SLFQRQDLSRVIF 56
Query: 124 DSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLD-MEPNAFTISSVITAASKLRDL 182
DS+ ++ W S+I YTRAG +L F M + ++P+ ++ + + A + D
Sbjct: 57 DSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDF 116
Query: 183 ALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIST 242
G +H ++ G S+ I +ALV+MY + R + A ++FD+ +DVV W ++S
Sbjct: 117 KKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKM-HVKDVVTWNTMVSG 175
Query: 243 LTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICG 302
L +N AL LF M R C + D + L+ A + L + LH V+ G
Sbjct: 176 LAQNGCSSAALLLFHDM-RSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI- 233
Query: 303 NVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAV---FELVR 359
S L+DMY C + A VF+ + K+ SW M++AY N +E V F+L+R
Sbjct: 234 -FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR 292
Query: 360 ERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
V + A + L+A + V ++ G +H V++G DV V ++L+ +Y+KCG ++
Sbjct: 293 NYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELE 352
Query: 419 FAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACS 478
A++LF+++E R+ ++W+AMI Q G+ E + LF DM++ ++P+ +T VL C+
Sbjct: 353 IAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCA 412
Query: 479 HTGLVDEGRRYFALMVDEYGIKPGVE 504
G+ + Y IK +E
Sbjct: 413 GVAASRLGKS-----IHCYAIKADIE 433
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 213/435 (48%), Gaps = 11/435 (2%)
Query: 116 LPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITA 175
L A+++F+ + +D +W ++++AY G L+LF M + D+ N +S + A
Sbjct: 250 LYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQA 309
Query: 176 ASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVG 235
A+ + DL G +H + +G + ++++L+ MY + + A +LF + E DVV
Sbjct: 310 AAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFI-NIEDRDVVS 368
Query: 236 WTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV 295
W+A+I++ + EA+ LF M R + P+ T ++L CA + R GK +H
Sbjct: 369 WSAMIASYEQAGQHDEAISLFRDMMR-IHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYA 427
Query: 296 VGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQ----NKEY 351
+ I + ++++ MY KCG+ A F+RL K++V++ A+ Y Q NK +
Sbjct: 428 IKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAF 487
Query: 352 EAVFELVRERGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDL 410
+ V++ ++ GV D +L+ C+ + G V+ Q ++ G + V AL+++
Sbjct: 488 D-VYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINM 546
Query: 411 YAKCGCVDFAQRLFLSMEV-RNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYIT 469
+ KC + A LF ++ ++WN M+ G +G+ E + F M E +P+ +T
Sbjct: 547 FTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVT 606
Query: 470 FIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENA 529
F+ ++ A + + G + ++ + G N ++D+ + MIE +E
Sbjct: 607 FVNIVRAAAELSALRVGMSVHSSLI-QCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEI 665
Query: 530 DCRYDHSLWAVLLGA 544
+Y S W +L A
Sbjct: 666 SNKYIVS-WNTMLSA 679
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 180/386 (46%), Gaps = 20/386 (5%)
Query: 223 LFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANL 282
+FD +P VV W ++I TR + REAL F M G+ PD ++F L ACA
Sbjct: 55 IFDSVRDP-GVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGS 113
Query: 283 GWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAML 342
++G +H + +G+ +V + ++L++MY K + AR VFD++ K+ V+W M+
Sbjct: 114 MDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMV 173
Query: 343 SAYCQNKEYEA---VFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGW 398
S QN A +F +R V D + ++ A S + + + +H ++KG
Sbjct: 174 SGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI 233
Query: 399 RDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDM 458
S L+D+Y C + A+ +F + +++ +W M+ A NG EVLELF+ M
Sbjct: 234 --FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLM 291
Query: 459 IKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPG----VEHYNCMIDLLG 514
+ + + L A ++ G + +G + + +Y ++ G V ++ +
Sbjct: 292 RNYDVRMNKVAAASALQAAAYVGDLVKG-----IAIHDYAVQQGLIGDVSVATSLMSMYS 346
Query: 515 RAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKM--IELEPD-FHLS 571
+ +E AE L N + R D W+ ++ + + + A + R M I ++P+ L+
Sbjct: 347 KCGELEIAEQLFINIEDR-DVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLT 405
Query: 572 YVLLGNIYRAVGRWNDAMEIRKLMED 597
VL G A R ++ + D
Sbjct: 406 SVLQGCAGVAASRLGKSIHCYAIKAD 431
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/418 (34%), Positives = 233/418 (55%), Gaps = 7/418 (1%)
Query: 197 FHSNTVISSALVDMYGR-NRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRL 255
+SN V+SS LV Y + N +L +F P ++ W II +R+ +++ L
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPY-RNIFSWNIIIGEFSRSGFASKSIDL 120
Query: 256 FVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYG 315
F+ M R + PD FT +L AC+ + G +H + LG ++ V S+L+ MY
Sbjct: 121 FLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYV 180
Query: 316 KCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVS----DLYAFGT 371
GK+ AR +FD + ++SV +TAM Y Q E + RE G S D +
Sbjct: 181 DMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVS 240
Query: 372 VLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRN 431
+L AC + A+ GK VH +R+ + + +A+ D+Y KC +D+A +F++M R+
Sbjct: 241 LLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRD 300
Query: 432 QITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFA 491
I+W+++I G +G +LF++M+KEG+EP+ +TF+GVL AC+H GLV++ YF
Sbjct: 301 VISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFR 360
Query: 492 LMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDY 551
LM EY I P ++HY + D + RA ++EEAE LE+ + D ++ +L C +
Sbjct: 361 LM-QEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNV 419
Query: 552 VTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
ERVAR++I+L+P YV L +Y A GR+++A +R+ M+++ + K+PG S I
Sbjct: 420 EVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 189/414 (45%), Gaps = 41/414 (9%)
Query: 95 IHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLF 154
++S+ + + L+ Y KL P + ++F + R+I +W +I ++R+G S+ LF
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 155 SQML-DLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGR 213
+M + + P+ FT+ ++ A S R+ G +H + + GF S+ +SSALV MY
Sbjct: 122 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVD 181
Query: 214 NRAVRDALKLFDESPEPEDVVGWTAIISTLTRND-------MFREALRLFVAMHRGCGLV 266
+ A KLFD+ P D V +TA+ + MFRE G
Sbjct: 182 MGKLLHARKLFDDMPV-RDSVLYTAMFGGYVQQGEAMLGLAMFREM--------GYSGFA 232
Query: 267 PDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVV 326
D +LL AC LG L+ GK +H + C + + +++ DMY KC + A V
Sbjct: 233 LDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTV 292
Query: 327 FDRLGDKNSVSWTAMLSAYCQNKEYEAVF----ELVRERGVSDLYAFGTVLRACSGVAAV 382
F + ++ +SW++++ Y + + F E+++E + F VL AC+ V
Sbjct: 293 FVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLV 352
Query: 383 MLGKEVHCQYVRKGGWRDVIVE----SALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAM 438
E Y R +++ E +++ D ++ G ++ A++ M V+ A+
Sbjct: 353 ----EKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPD---EAV 405
Query: 439 IGGLAQNGRGTEVLELFEDMIKE--GMEPD----YITFIGVLFACSHTGLVDEG 486
+G + + +E+ E + +E ++P Y+T G+ S G DE
Sbjct: 406 MGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLY---SAAGRFDEA 456
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/464 (31%), Positives = 242/464 (52%), Gaps = 9/464 (1%)
Query: 68 ASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLA 127
+++ ++ S+ G HA A+K+G+ + F+ SL+ +Y K G + A+ +FD +
Sbjct: 218 SNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCG-KVGLARRVFDEIV 276
Query: 128 VRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLD-MEPNAFTISSVITAASKLRDLALGA 186
RDI+ W ++I+ R +L LF M+ + + PN+ +++++ ++ L LG
Sbjct: 277 ERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGK 336
Query: 187 CLHAMVI-SRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTR 245
+HA V+ S+ + + S L+D+Y + + ++F S + + + WTA++S
Sbjct: 337 EVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQ-RNAISWTALMSGYAA 395
Query: 246 NDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV 305
N F +ALR V M + G PD T T+L CA L ++QGKE+H + NV
Sbjct: 396 NGRFDQALRSIVWMQQE-GFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVS 454
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVR----ER 361
+ +SL+ MY KCG +FDRL +N +WTAM+ Y +N + A E+ R +
Sbjct: 455 LVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSK 514
Query: 362 GVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
D G VL CS + A+ LGKE+H ++K V + ++ +Y KCG + A
Sbjct: 515 HRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSAN 574
Query: 422 RLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG 481
F ++ V+ +TW A+I N + + FE M+ G P+ TF VL CS G
Sbjct: 575 FSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAG 634
Query: 482 LVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESL 525
VDE R+F LM+ Y ++P EHY+ +I+LL R +EEA+ L
Sbjct: 635 FVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 230/455 (50%), Gaps = 10/455 (2%)
Query: 40 KDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDR 99
+ +L AL +L+ + P + +++LL+ C + S LHG +H H +G+ S+
Sbjct: 88 RQNNLEVALTILDYLEQRGIP-VNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNE 146
Query: 100 FVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAG--RPINSLQLFSQM 157
F+ L+ +Y G + AQ +FD ++ +W +L+ +G R + L F++M
Sbjct: 147 FLRTKLVHMYTACG-SVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEM 205
Query: 158 LDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAV 217
+L ++ N +++S+V + + L G HA+ I G ++ + ++LVDMY + V
Sbjct: 206 RELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKV 265
Query: 218 RDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLA 277
A ++FDE E D+V W A+I+ L N EAL LF M + P+ T+L
Sbjct: 266 GLARRVFDEIVE-RDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILP 324
Query: 278 ACANLGWLRQGKELHAKVV-GLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSV 336
++ L+ GKE+HA V+ V S L+D+Y KCG + R VF +N++
Sbjct: 325 VLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAI 384
Query: 337 SWTAMLSAYCQNKEYE----AVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQY 392
SWTA++S Y N ++ ++ + +E D+ TVL C+ + A+ GKE+HC
Sbjct: 385 SWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYA 444
Query: 393 VRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVL 452
++ +V + ++L+ +Y+KCG ++ RLF +E RN W AMI +N +
Sbjct: 445 LKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGI 504
Query: 453 ELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGR 487
E+F M+ PD +T VL CS + G+
Sbjct: 505 EVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGK 539
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/418 (35%), Positives = 225/418 (53%), Gaps = 40/418 (9%)
Query: 231 EDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANL--GWLRQG 288
E V WT+ I+ LTRN EA + F M G+ P+ TF LL+ C + G G
Sbjct: 34 ETTVSWTSRINLLTRNGRLAEAAKEFSDMTLA-GVEPNHITFIALLSGCGDFTSGSEALG 92
Query: 289 KELHAKVVGLGICGN-VVVESSLLDMYGKCGKVGQARVVFDRLGDKNSV----------- 336
LH LG+ N V+V ++++ MY K G+ +AR+VFD + DKNSV
Sbjct: 93 DLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMR 152
Query: 337 --------------------SWTAMLSAYCQNKEYEAVFELVRERGVS----DLYAFGTV 372
SWTAM++ + + E RE +S D A
Sbjct: 153 SGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAA 212
Query: 373 LRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQ 432
L AC+ + A+ G VH + + +V V ++L+DLY +CGCV+FA+++F +ME R
Sbjct: 213 LNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTV 272
Query: 433 ITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFAL 492
++WN++I G A NG E L F M ++G +PD +TF G L ACSH GLV+EG RYF +
Sbjct: 273 VSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQI 332
Query: 493 MVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTK-CSDY 551
M +Y I P +EHY C++DL RA +E+A L+++ + + + LL AC+ ++
Sbjct: 333 MKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNI 392
Query: 552 VTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
V AER+ + + +L H +YV+L N+Y A G+W A ++R+ M+ G+KK PG S I
Sbjct: 393 VLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSI 450
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 159/365 (43%), Gaps = 48/365 (13%)
Query: 132 IAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRD--LALGACLH 189
++WTS I+ TR GR + + FS M +EPN T ++++ ALG LH
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 190 AMVISRGFH--------------------------------SNTVISSALVDMYGRNRAV 217
G N+V + ++D Y R+ V
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 218 RDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLA 277
+A K+FD+ PE D++ WTA+I+ + EAL F M G+ PD L
Sbjct: 157 DNAAKMFDKMPE-RDLISWTAMINGFVKKGYQEEALLWFREMQIS-GVKPDYVAIIAALN 214
Query: 278 ACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVS 337
AC NLG L G +H V+ NV V +SL+D+Y +CG V AR VF + + VS
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVS 274
Query: 338 WTAMLSAYCQN---KEYEAVFELVRERGVS-DLYAFGTVLRACSGVAAVMLG----KEVH 389
W +++ + N E F ++E+G D F L ACS V V G + +
Sbjct: 275 WNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMK 334
Query: 390 CQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR-NQITWNAMIGGLAQNGRG 448
C Y + LVDLY++ G ++ A +L SM ++ N++ +++ + +G
Sbjct: 335 CDYRIS---PRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNN 391
Query: 449 TEVLE 453
+ E
Sbjct: 392 IVLAE 396
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 159/375 (42%), Gaps = 46/375 (12%)
Query: 10 PPLQRHXXXXXXXXXGFVASSTDSEILQHCKDGSLRQAL-HLLNTSQTTLDPNLKPVLYA 68
P +QRH + S I ++G L +A + + ++PN + +
Sbjct: 23 PKIQRHNQSTSETTVSWT-----SRINLLTRNGRLAEAAKEFSDMTLAGVEPN--HITFI 75
Query: 69 SLLQTC---TKTSSFLHGTTLHAHALKSGIHSDR-FVGNSLLTLYLKLGP---------- 114
+LL C T S L G LH +A K G+ + VG +++ +Y K G
Sbjct: 76 ALLSGCGDFTSGSEAL-GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDY 134
Query: 115 --------------------HLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLF 154
+ A +FD + RD+I+WT++I+ + + G +L F
Sbjct: 135 MEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWF 194
Query: 155 SQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRN 214
+M ++P+ I + + A + L L+ G +H V+S+ F +N +S++L+D+Y R
Sbjct: 195 REMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRC 254
Query: 215 RAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGT 274
V A ++F + E VV W ++I N E+L F M G PD TF
Sbjct: 255 GCVEFARQVF-YNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEK-GFKPDAVTFTG 312
Query: 275 LLAACANLGWLRQG-KELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK 333
L AC+++G + +G + I + L+D+Y + G++ A + + K
Sbjct: 313 ALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
Query: 334 NSVSWTAMLSAYCQN 348
+ L A C N
Sbjct: 373 PNEVVIGSLLAACSN 387
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 150/452 (33%), Positives = 236/452 (52%), Gaps = 6/452 (1%)
Query: 168 TISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDES 227
+SS+I A + L LH V+ + + I LV Y R A KLFDE
Sbjct: 33 NVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEM 92
Query: 228 PEPEDVVGWTAIISTLTRNDMFREALRLFVAMH-RGCGLVPDGFTFGTLLAACANLGWLR 286
PE D+V W ++IS + + + M G P+ TF ++++AC G
Sbjct: 93 PE-RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 287 QGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYC 346
+G+ +H V+ G+ V V ++ ++ YGK G + + +F+ L KN VSW M+ +
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211
Query: 347 QNKEYE---AVFELVRERG-VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVI 402
QN E A F + R G D F VLR+C + V L + +H + G +
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 403 VESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEG 462
+ +AL+DLY+K G ++ + +F + + + W AM+ A +G G + ++ FE M+ G
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG 331
Query: 463 MEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEA 522
+ PD++TF +L ACSH+GLV+EG+ YF M Y I P ++HY+CM+DLLGR+ ++++A
Sbjct: 332 ISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391
Query: 523 ESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAV 582
L++ +W LLGAC D + A ++ ELEP +YV+L NIY A
Sbjct: 392 YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSAS 451
Query: 583 GRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
G W DA IR LM+ +G+ + G S+I N+
Sbjct: 452 GLWKDASRIRNLMKQKGLVRASGCSYIEHGNK 483
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 129/450 (28%), Positives = 220/450 (48%), Gaps = 27/450 (6%)
Query: 57 TLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHL 116
+LD N+ ++ A +++C S LH +KS + F+G+ L+ YL+LG H
Sbjct: 29 SLDANVSSLIAA--VKSCV---SIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLG-HD 82
Query: 117 PQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQML--DLDMEPNAFTISSVIT 174
A+ LFD + RD+++W SLIS Y+ G ++ S+M+ ++ PN T S+I+
Sbjct: 83 VCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMIS 142
Query: 175 AASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVV 234
A G C+H +V+ G + +A ++ YG+ + + KLF E +++V
Sbjct: 143 ACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLF-EDLSIKNLV 201
Query: 235 GWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAK 294
W +I +N + + L F M R G PD TF +L +C ++G +R + +H
Sbjct: 202 SWNTMIVIHLQNGLAEKGLAYF-NMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGL 260
Query: 295 VVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN---KEY 351
++ G GN + ++LLD+Y K G++ + VF + +S++WTAML+AY + ++
Sbjct: 261 IMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDA 320
Query: 352 EAVFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVE--SALV 408
FEL+ G+S D F +L ACS V GK + + + K D ++ S +V
Sbjct: 321 IKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKH-YFETMSKRYRIDPRLDHYSCMV 379
Query: 409 DLYAKCGCVDFAQRLFLSMEVR-NQITWNAMIGG---LAQNGRGTEVLE-LFEDMIKEGM 463
DL + G + A L M + + W A++G GT+ E LFE ++G
Sbjct: 380 DLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDG- 438
Query: 464 EPDYITFIGVLFACSHTGLVDEGRRYFALM 493
+Y+ + A +GL + R LM
Sbjct: 439 -RNYVMLSNIYSA---SGLWKDASRIRNLM 464
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 173/374 (46%), Gaps = 25/374 (6%)
Query: 42 GSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFV 101
G + L + S+ PN V + S++ C S G +H +K G+ + V
Sbjct: 114 GKCFEVLSRMMISEVGFRPN--EVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKV 171
Query: 102 GNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLD 161
N+ + Y K G L + LF+ L+++++++W ++I + + G L F+ +
Sbjct: 172 VNAFINWYGKTGD-LTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVG 230
Query: 162 MEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDAL 221
EP+ T +V+ + + + L +H +++ GF N I++AL+D+Y + + D+
Sbjct: 231 HEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSS 290
Query: 222 KLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACAN 281
+F E P D + WTA+++ + R+A++ F M G+ PD TF LL AC++
Sbjct: 291 TVFHEITSP-DSMAWTAMLAAYATHGFGRDAIKHFELMVH-YGISPDHVTFTHLLNACSH 348
Query: 282 LGWLRQGKELHAKVVG-LGICGNVVVESSLLDMYGKCGKVGQARVVFDRLG-DKNSVSWT 339
G + +GK + I + S ++D+ G+ G + A + + + +S W
Sbjct: 349 SGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWG 408
Query: 340 AMLSAYCQ--------NKEYEAVFELVRERG-----VSDLYAFGTVLRACSGVAAVM--- 383
A+L A C+ K E +FEL G +S++Y+ + + S + +M
Sbjct: 409 ALLGA-CRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQK 467
Query: 384 -LGKEVHCQYVRKG 396
L + C Y+ G
Sbjct: 468 GLVRASGCSYIEHG 481
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 158/548 (28%), Positives = 276/548 (50%), Gaps = 21/548 (3%)
Query: 69 SLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAV 128
+L + C S +H +HA ++ G+ D+ + + ++ L + ++F+ +
Sbjct: 15 TLFKLC---KSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPS 71
Query: 129 RDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDM-EPNAFTISSVITAASKLRDLALGAC 187
W LI Y+ ++ + +M+ + P+ +T V+ S + +G+
Sbjct: 72 PGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSS 131
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRND 247
+H +V+ GF + V+ ++ VD YG+ + + A K+F E PE + V WTA++ ++
Sbjct: 132 VHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPE-RNAVSWTALVVAYVKSG 190
Query: 248 MFREALRLFVAM-HRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
EA +F M R G ++ L+ G L K+L ++ +++
Sbjct: 191 ELEEAKSMFDLMPERNLG------SWNALVDGLVKSGDLVNAKKLFDEMPK----RDIIS 240
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVS-- 364
+S++D Y K G + AR +F+ + +W+A++ Y QN + F++ E
Sbjct: 241 YTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNV 300
Query: 365 --DLYAFGTVLRACSGVAAVMLGKEVHCQ-YVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
D + ++ ACS + L ++V + R + V AL+D+ AKCG +D A
Sbjct: 301 KPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAA 360
Query: 422 RLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG 481
+LF M R+ +++ +M+ G+A +G G+E + LFE M+ EG+ PD + F +L C +
Sbjct: 361 KLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSR 420
Query: 482 LVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVL 541
LV+EG RYF LM +Y I +HY+C+++LL R ++EA L+++ S W L
Sbjct: 421 LVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSL 480
Query: 542 LGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
LG C+ + AE VAR + ELEP SYVLL NIY A+ RW D +R M + G+
Sbjct: 481 LGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGIT 540
Query: 602 KLPGKSWI 609
K+ G+SWI
Sbjct: 541 KICGRSWI 548
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 152/535 (28%), Positives = 282/535 (52%), Gaps = 49/535 (9%)
Query: 116 LPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITA 175
+ +A+ LFD L RD++ WT +I+ Y + G + +LF + +D N T +++++
Sbjct: 62 IAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDR---VDSRKNVVTWTAMVSG 118
Query: 176 ASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVG 235
+ + L++ L + R N V + ++D Y ++ + AL+LFDE PE ++V
Sbjct: 119 YLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQSGRIDKALELFDEMPE-RNIVS 173
Query: 236 WTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKEL---- 291
W +++ L + EA+ LF M R D ++ ++ A G + + + L
Sbjct: 174 WNSMVKALVQRGRIDEAMNLFERMPR-----RDVVSWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 292 --------HAKVVGLGICGNVVVESSLLDM---------------YGKCGKVGQARVVFD 328
+A + G + L + + + ++ +A +FD
Sbjct: 229 PERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFD 288
Query: 329 RLGDKNSVSWTAMLSAYCQNKEYEAVF----ELVRERGVS-DLYAFGTVLRACSGVAAVM 383
R+ +KN +SWT M++ Y +NKE E +++R+ V ++ + ++L ACS +A ++
Sbjct: 289 RMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLV 348
Query: 384 LGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEV--RNQITWNAMIGG 441
G+++H + ++ IV SAL+++Y+K G + A+++F + V R+ I+WN+MI
Sbjct: 349 EGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAV 408
Query: 442 LAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKP 501
A +G G E +E++ M K G +P +T++ +LFACSH GLV++G +F +V + +
Sbjct: 409 YAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPL 468
Query: 502 GVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKM 561
EHY C++DL GRA +++ + + D R S + +L AC ++ A+ V +K+
Sbjct: 469 REEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKV 528
Query: 562 IELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSW--IGSENQ 614
+E D +YVL+ NIY A G+ +A E+R M+++G+KK PG SW +G +N
Sbjct: 529 LETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNH 583
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 154/299 (51%), Gaps = 18/299 (6%)
Query: 103 NSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDM 162
NS++ ++ G + +A LF+ + RD+++WT+++ + G+ + +LF M
Sbjct: 175 NSMVKALVQRG-RIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMP---- 229
Query: 163 EPNAFTISSVITAASKLRDLALGACLHAMVISRGFHS-NTVISSALVDMYGRNRAVRDAL 221
E N + +++IT ++ + L ++ R F S NT+I+ + RNR + A
Sbjct: 230 ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITG-----FIRNREMNKAC 284
Query: 222 KLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACAN 281
LFD PE ++V+ WT +I+ N EAL +F M R + P+ T+ ++L+AC++
Sbjct: 285 GLFDRMPE-KNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSD 343
Query: 282 LGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDR--LGDKNSVSWT 339
L L +G+++H + N +V S+LL+MY K G++ AR +FD + ++ +SW
Sbjct: 344 LAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWN 403
Query: 340 AMLSAYCQN---KEYEAVFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVR 394
+M++ Y + KE ++ +R+ G + +L ACS V G E VR
Sbjct: 404 SMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVR 462
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 176/405 (43%), Gaps = 51/405 (12%)
Query: 228 PEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQ 287
P+PE ++G + + EA +LF + D T+ ++ LG +R+
Sbjct: 47 PQPEWLIGELCKVGKIA------EARKLFDGLPE-----RDVVTWTHVITGYIKLGDMRE 95
Query: 288 GKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQ 347
+EL +V NVV ++++ Y + ++ A ++F + ++N VSW M+ Y Q
Sbjct: 96 ARELFDRVDSRK---NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQ 152
Query: 348 NKEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESAL 407
+ + EL E ++ ++ ++++A + + + R RDV+ +A+
Sbjct: 153 SGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPR----RDVVSWTAM 208
Query: 408 VDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGM---- 463
VD AK G VD A+RLF M RN I+WNAMI G AQN R E +LF+ M +
Sbjct: 209 VDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWN 268
Query: 464 -----------------------EPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIK 500
E + I++ ++ +E F+ M+ + +K
Sbjct: 269 TMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVK 328
Query: 501 PGVEHYNCMI----DLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAER 556
P V Y ++ DL G E ++ L+ + + + + + LL +K + + A +
Sbjct: 329 PNVGTYVSILSACSDLAGLVEG-QQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARK 387
Query: 557 VARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
+ + + D +S+ + +Y G +A+E+ M G K
Sbjct: 388 MFDNGLVCQRDL-ISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFK 431
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 179/614 (29%), Positives = 283/614 (46%), Gaps = 109/614 (17%)
Query: 37 QHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIH 96
+H L QA+ L S T L L ASLLQ C T S G +H H +G
Sbjct: 20 KHATKAELSQAVSRLE-SLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFK 78
Query: 97 SDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQ 156
N+LL+ LI Y + G+PI++ ++F Q
Sbjct: 79 RP----NTLLS---------------------------NHLIGMYMKCGKPIDACKVFDQ 107
Query: 157 MLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRA 216
M LR+L + N ++S Y ++
Sbjct: 108 M--------------------HLRNL--------------YSWNNMVSG-----YVKSGM 128
Query: 217 VRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLL 276
+ A +FD PE DVV W ++ ++ EAL + R G+ + F+F LL
Sbjct: 129 LVRARVVFDSMPE-RDVVSWNTMVIGYAQDGNLHEALWFYKEFRRS-GIKFNEFSFAGLL 186
Query: 277 AACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFD-------- 328
AC L+ ++ H +V+ G NVV+ S++D Y KCG++ A+ FD
Sbjct: 187 TACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIH 246
Query: 329 ----------RLGD-------------KNSVSWTAMLSAYCQNKEYEAVFELVRER---G 362
+LGD KN VSWTA+++ Y + +L R+ G
Sbjct: 247 IWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALG 306
Query: 363 VS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
V + + F + L A + +A++ GKE+H +R + IV S+L+D+Y+K G ++ ++
Sbjct: 307 VKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASE 366
Query: 422 RLFLSMEVRNQ-ITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHT 480
R+F + ++ + WN MI LAQ+G G + L + +DMIK ++P+ T + +L ACSH+
Sbjct: 367 RVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHS 426
Query: 481 GLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAV 540
GLV+EG R+F M ++GI P EHY C+IDLLGRA +E +E D +W
Sbjct: 427 GLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNA 486
Query: 541 LLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGV 600
+LG C + ++ A ++I+L+P+ Y+LL +IY G+W ++R +M+ R V
Sbjct: 487 ILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRV 546
Query: 601 KKLPGKSWIGSENQ 614
K SWI E +
Sbjct: 547 NKEKAVSWIEIEKK 560
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 147/321 (45%), Gaps = 35/321 (10%)
Query: 30 STDSEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAH 89
S ++ ++ + +DG+L +AL + + +A LL C K+ H
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFYKEFRRS-GIKFNEFSFAGLLTACVKSRQLQLNRQAHGQ 204
Query: 90 ALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDI------------------ 131
L +G S+ + S++ Y K G + A+ FD + V+DI
Sbjct: 205 VLVAGFLSNVVLSCSIIDAYAKCG-QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEA 263
Query: 132 -------------IAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASK 178
++WT+LI+ Y R G +L LF +M+ L ++P FT SS + A++
Sbjct: 264 AEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASAS 323
Query: 179 LRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTA 238
+ L G +H +I N ++ S+L+DMY ++ ++ + ++F + D V W
Sbjct: 324 IASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNT 383
Query: 239 IISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQG-KELHAKVVG 297
+IS L ++ + +ALR+ M + + P+ T +L AC++ G + +G + + V
Sbjct: 384 MISALAQHGLGHKALRMLDDMIK-FRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQ 442
Query: 298 LGICGNVVVESSLLDMYGKCG 318
GI + + L+D+ G+ G
Sbjct: 443 HGIVPDQEHYACLIDLLGRAG 463
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 248 bits (633), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 167/501 (33%), Positives = 256/501 (51%), Gaps = 24/501 (4%)
Query: 119 AQTLFDSLAVRD-IIAWTSLISAYTRAGRPINSLQLFSQMLDLDME----PNAFTISSVI 173
A+ LFD RD S+I AY + +S L+ DL E P+ FT +++
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYR---DLRKETCFAPDNFTFTTLT 85
Query: 174 TAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDV 233
+ S + G LH+ + GF ++ +S+ +VDMY + + A FDE P +V
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 234 VGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHA 293
WTA+IS R A +LF M V D + ++ G + + L
Sbjct: 146 -SWTALISGYIRCGELDLASKLFDQMPH----VKDVVIYNAMMDGFVKSGDMTSARRLFD 200
Query: 294 KVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEA 353
++ V+ ++++ Y + AR +FD + ++N VSW M+ YCQNK+ +
Sbjct: 201 EMTH----KTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQE 256
Query: 354 VFELVRERGVS-----DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALV 408
L +E + D +VL A S A+ LG+ HC RK + V V +A++
Sbjct: 257 GIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAIL 316
Query: 409 DLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYI 468
D+Y+KCG ++ A+R+F M + +WNAMI G A NG L+LF M+ E +PD I
Sbjct: 317 DMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEI 375
Query: 469 TFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLEN 528
T + V+ AC+H GLV+EGR++F +M E G+ +EHY CM+DLLGRA ++EAE L+ N
Sbjct: 376 TMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITN 434
Query: 529 ADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDA 588
+ + + L AC + D AER+ +K +ELEP +YVLL N+Y A RW+D
Sbjct: 435 MPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDF 494
Query: 589 MEIRKLMEDRGVKKLPGKSWI 609
++ +M KK G S I
Sbjct: 495 GMVKNVMRKNQAKKEVGCSLI 515
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 186/411 (45%), Gaps = 35/411 (8%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
+ +L ++C+ + G LH+ + G +D +V ++ +Y K G + A+ FD +
Sbjct: 81 FTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGK-MGCARNAFDEM 139
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDL------DMEPNAFTISSVITAASKLR 180
R ++WT+LIS Y R G + +LF QM + + + F S +T+A +L
Sbjct: 140 PHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLF 199
Query: 181 DLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAII 240
D H + + ++ Y + + A KLFD PE ++V W +I
Sbjct: 200 D-------------EMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPE-RNLVSWNTMI 245
Query: 241 STLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGI 300
+N +E +RLF M L PD T ++L A ++ G L G+ H V +
Sbjct: 246 GGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKL 305
Query: 301 CGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFEL--- 357
V V +++LDMY KCG++ +A+ +FD + +K SW AM+ Y N A +L
Sbjct: 306 DKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVT 365
Query: 358 --VRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVE-SALVDLYAKC 414
+ E+ D V+ AC+ V G++ +R+ G I +VDL +
Sbjct: 366 MMIEEK--PDEITMLAVITACNHGGLVEEGRKWF-HVMREMGLNAKIEHYGCMVDLLGRA 422
Query: 415 GCVDFAQRLFLSMEVR-NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGME 464
G + A+ L +M N I ++ + Q + +E E ++K+ +E
Sbjct: 423 GSLKEAEDLITNMPFEPNGIILSSFLSACGQ----YKDIERAERILKKAVE 469
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/562 (27%), Positives = 287/562 (51%), Gaps = 43/562 (7%)
Query: 71 LQTCTKTSSFL----HGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
+ TC S+ + G HA A+ +G+ D +G SLL Y K+G + A+ +FD +
Sbjct: 277 VSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGL-IEYAEMVFDRM 335
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
+D++ W +IS Y + G +++ + M ++ + T++++++AA++ +L LG
Sbjct: 336 FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGK 395
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
+ I F S+ V++S ++DMY + ++ DA K+FD + E +D++ W +++ +
Sbjct: 396 EVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVE-KDLILWNTLLAAYAES 454
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
+ EALRLF M G+ P+ T+ ++ + G + + K++ ++ GI N++
Sbjct: 455 GLSGEALRLFYGMQLE-GVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLI- 512
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDL 366
SWT M++ QN E +R+ S L
Sbjct: 513 ------------------------------SWTTMMNGMVQNGCSEEAILFLRKMQESGL 542
Query: 367 ----YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVI-VESALVDLYAKCGCVDFAQ 421
++ L AC+ +A++ +G+ +H +R ++ +E++LVD+YAKCG ++ A+
Sbjct: 543 RPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAE 602
Query: 422 RLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG 481
++F S NAMI A G E + L+ + G++PD IT VL AC+H G
Sbjct: 603 KVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAG 662
Query: 482 LVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVL 541
+++ F +V + +KP +EHY M+DLL A E+A L+E + D + L
Sbjct: 663 DINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSL 722
Query: 542 LGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
+ +C K + ++RK++E EP+ +YV + N Y G W++ +++R++M+ +G+K
Sbjct: 723 VASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLK 782
Query: 602 KLPGKSWIGSENQKGSLSGLAN 623
K PG SWI ++G +AN
Sbjct: 783 KKPGCSWIQITGEEGVHVFVAN 804
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 155/490 (31%), Positives = 259/490 (52%), Gaps = 11/490 (2%)
Query: 39 CKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSD 98
CK+G +++AL L+ T + + P +Y +LQ C G +HA LK+G
Sbjct: 46 CKNGEIKEALSLV-TEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYA 104
Query: 99 R--FVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQ 156
R ++ L+ Y K L A+ LF L VR++ +W ++I R G +L F +
Sbjct: 105 RNEYIETKLVIFYAKCDA-LEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVE 163
Query: 157 MLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRA 216
ML+ ++ P+ F + +V A L+ G +H V+ G ++S+L DMYG+
Sbjct: 164 MLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGV 223
Query: 217 VRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLL 276
+ DA K+FDE P+ + V W A++ +N EA+RLF M R G+ P T T L
Sbjct: 224 LDDASKVFDEIPD-RNAVAWNALMVGYVQNGKNEEAIRLFSDM-RKQGVEPTRVTVSTCL 281
Query: 277 AACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSV 336
+A AN+G + +GK+ HA + G+ + ++ +SLL+ Y K G + A +VFDR+ +K+ V
Sbjct: 282 SASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVV 341
Query: 337 SWTAMLSAYCQNKEYE-AVF--ELVR-ERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQY 392
+W ++S Y Q E A++ +L+R E+ D T++ A + + LGKEV C
Sbjct: 342 TWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYC 401
Query: 393 VRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVL 452
+R D+++ S ++D+YAKCG + A+++F S ++ I WN ++ A++G E L
Sbjct: 402 IRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEAL 461
Query: 453 ELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDL 512
LF M EG+ P+ IT+ ++ + G VDE + F L + GI P + + M++
Sbjct: 462 RLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF-LQMQSSGIIPNLISWTTMMNG 520
Query: 513 LGRAEMIEEA 522
+ + EEA
Sbjct: 521 MVQNGCSEEA 530
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 153/316 (48%), Gaps = 26/316 (8%)
Query: 222 KLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMH-RGCGLVPDGFTFGTLLAACA 280
K DE + +S+L +N +EAL L M R + P+ +G +L C
Sbjct: 24 KHHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPE--IYGEILQGCV 81
Query: 281 NLGWLRQGKELHAKVVGLG--ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSW 338
L GK++HA+++ G N +E+ L+ Y KC + A V+F +L +N SW
Sbjct: 82 YERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSW 141
Query: 339 TAMLSAYCQNKEYEAVF----ELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVR 394
A++ C+ E E++ D + V +AC + G+ VH YV
Sbjct: 142 AAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVH-GYVV 200
Query: 395 KGGWRD-VIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLE 453
K G D V V S+L D+Y KCG +D A ++F + RN + WNA++ G QNG+ E +
Sbjct: 201 KSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIR 260
Query: 454 LFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVE--------- 504
LF DM K+G+EP +T L A ++ G V+EG++ A+ I G+E
Sbjct: 261 LFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAI-----AIVNGMELDNILGTSL 315
Query: 505 -HYNCMIDLLGRAEMI 519
++ C + L+ AEM+
Sbjct: 316 LNFYCKVGLIEYAEMV 331
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/335 (38%), Positives = 206/335 (61%), Gaps = 5/335 (1%)
Query: 285 LRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSA 344
+R G+ +H+ V+ G + V++SLL +Y CG V A VFD++ +K+ V+W ++++
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 345 YCQNKEYEAVFELVRE---RGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRD 400
+ +N + E L E +G+ D + ++L AC+ + A+ LGK VH ++ G R+
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 401 VIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDM-I 459
+ + L+DLYA+CG V+ A+ LF M +N ++W ++I GLA NG G E +ELF+ M
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 460 KEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMI 519
EG+ P ITF+G+L+ACSH G+V EG YF M +EY I+P +EH+ CM+DLL RA +
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243
Query: 520 EEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIY 579
++A +++ + + +W LLGACT D AE ++++LEP+ YVLL N+Y
Sbjct: 244 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMY 303
Query: 580 RAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
+ RW+D +IRK M GVKK+PG S + N+
Sbjct: 304 ASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNR 338
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 149/276 (53%), Gaps = 11/276 (3%)
Query: 179 LRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTA 238
+ D+ LG +H++VI GF S + ++L+ +Y V A K+FD+ PE +D+V W +
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE-KDLVAWNS 59
Query: 239 IISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGL 298
+I+ N EAL L+ M+ G+ PDGFT +LL+ACA +G L GK +H ++ +
Sbjct: 60 VINGFAENGKPEEALALYTEMNSK-GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 118
Query: 299 GICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELV 358
G+ N+ + LLD+Y +CG+V +A+ +FD + DKNSVSWT+++ N + EL
Sbjct: 119 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 178
Query: 359 RERGVSD-----LYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVE--SALVDLY 411
+ ++ F +L ACS V G E + + +R+ + +E +VDL
Sbjct: 179 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLL 237
Query: 412 AKCGCVDFAQRLFLSMEVR-NQITWNAMIGGLAQNG 446
A+ G V A SM ++ N + W ++G +G
Sbjct: 238 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 142/264 (53%), Gaps = 4/264 (1%)
Query: 83 GTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYT 142
G T+H+ ++SG S +V NSLL LY G + A +FD + +D++AW S+I+ +
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGD-VASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 143 RAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTV 202
G+P +L L+++M ++P+ FTI S+++A +K+ L LG +H +I G N
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 125
Query: 203 ISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRG 262
S+ L+D+Y R V +A LFDE + ++ V WT++I L N +EA+ LF M
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVD-KNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 184
Query: 263 CGLVPDGFTFGTLLAACANLGWLRQGKELHAKV-VGLGICGNVVVESSLLDMYGKCGKVG 321
GL+P TF +L AC++ G +++G E ++ I + ++D+ + G+V
Sbjct: 185 EGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVK 244
Query: 322 QARVVFDRLG-DKNSVSWTAMLSA 344
+A + N V W +L A
Sbjct: 245 KAYEYIKSMPMQPNVVIWRTLLGA 268
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 87/149 (58%), Gaps = 1/149 (0%)
Query: 379 VAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAM 438
+A V LG+ +H +R G + V+++L+ LYA CG V A ++F M ++ + WN++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 439 IGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYG 498
I G A+NG+ E L L+ +M +G++PD T + +L AC+ G + G+R M+ + G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI-KVG 119
Query: 499 IKPGVEHYNCMIDLLGRAEMIEEAESLLE 527
+ + N ++DL R +EEA++L +
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFD 148
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 25/189 (13%)
Query: 69 SLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAV 128
SLL C K + G +H + +K G+ + N LL LY + G + +A+TLFD +
Sbjct: 94 SLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCG-RVEEAKTLFDEMVD 152
Query: 129 RDIIAWTSLISAYTRAGRPINSLQLFSQMLDLD-MEPNAFTISSVITAASKLRDLALGAC 187
++ ++WTSLI G +++LF M + + P T + L AC
Sbjct: 153 KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI-----------LYAC 201
Query: 188 LHAMVISRGFHSNTVISS------------ALVDMYGRNRAVRDALKLFDESPEPEDVVG 235
H ++ GF + +VD+ R V+ A + P +VV
Sbjct: 202 SHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVI 261
Query: 236 WTAIISTLT 244
W ++ T
Sbjct: 262 WRTLLGACT 270
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 143/443 (32%), Positives = 241/443 (54%), Gaps = 14/443 (3%)
Query: 177 SKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGW 236
SK + L +HA +I+ G +T S L+ + + AL + + P P V +
Sbjct: 17 SKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHL-SSTVCLSYALSILRQIPNP-SVFLY 74
Query: 237 TAIISTLTRNDMFRE---ALRLF--VAMHRGCGLVPDGFTFGTLLAACA-NLGWLRQGKE 290
+IS++ N + A L+ + R + P+ FT+ +L A + W R G+
Sbjct: 75 NTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRA 134
Query: 291 LHAKVVGL--GICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN 348
LHA V+ + + V+++L+ Y CGK+ +AR +F+R+ + + +W +L+AY +
Sbjct: 135 LHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANS 194
Query: 349 KEY----EAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVE 404
+E E + +R + + + ++++C+ + + G H ++ + V
Sbjct: 195 EEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVG 254
Query: 405 SALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGME 464
++L+DLY+KCGC+ FA+++F M R+ +NAMI GLA +G G E +EL++ +I +G+
Sbjct: 255 TSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLV 314
Query: 465 PDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAES 524
PD TF+ + ACSH+GLVDEG + F M YGI+P VEHY C++DLLGR+ +EEAE
Sbjct: 315 PDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEE 374
Query: 525 LLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGR 584
++ + + +LW LG+ D+ E + ++ LE + +YVLL NIY V R
Sbjct: 375 CIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNR 434
Query: 585 WNDAMEIRKLMEDRGVKKLPGKS 607
W D + R+LM+D V K PG S
Sbjct: 435 WTDVEKTRELMKDHRVNKSPGIS 457
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 140/275 (50%), Gaps = 7/275 (2%)
Query: 82 HGTTLHAHALK--SGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLIS 139
HG LHAH LK ++ DRFV +L+ Y G L +A++LF+ + D+ W +L++
Sbjct: 131 HGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGK-LREARSLFERIREPDLATWNTLLA 189
Query: 140 AYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHS 199
AY + + ++ + + + PN ++ ++I + + L + G H V+
Sbjct: 190 AYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTL 249
Query: 200 NTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAM 259
N + ++L+D+Y + + A K+FDE + DV + A+I L + +E + L+ ++
Sbjct: 250 NQFVGTSLIDLYSKCGCLSFARKVFDEMSQ-RDVSCYNAMIRGLAVHGFGQEGIELYKSL 308
Query: 260 HRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGL-GICGNVVVESSLLDMYGKCG 318
GLVPD TF ++AC++ G + +G ++ + + GI V L+D+ G+ G
Sbjct: 309 -ISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSG 367
Query: 319 KVGQARVVFDRLGDK-NSVSWTAMLSAYCQNKEYE 352
++ +A ++ K N+ W + L + + ++E
Sbjct: 368 RLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFE 402
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 5/190 (2%)
Query: 69 SLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAV 128
+L+++C F+ G H + LK+ + ++FVG SL+ LY K G L A+ +FD ++
Sbjct: 221 ALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGC-LSFARKVFDEMSQ 279
Query: 129 RDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASK--LRDLALGA 186
RD+ + ++I G ++L+ ++ + P++ T I+A S L D L
Sbjct: 280 RDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGL-Q 338
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAII-STLTR 245
++M G LVD+ GR+ + +A + + P + W + + S+ T
Sbjct: 339 IFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTH 398
Query: 246 NDMFREALRL 255
D R + L
Sbjct: 399 GDFERGEIAL 408
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 206/355 (58%), Gaps = 6/355 (1%)
Query: 264 GLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQA 323
G D + + + +C R G H + G +V + SSL+ +Y G+V A
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENA 174
Query: 324 RVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRE--RGVSDL--YAFGTVLRACSGV 379
VF+ + ++N VSWTAM+S + Q + +L + + SD Y F +L AC+G
Sbjct: 175 YKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGS 234
Query: 380 AAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMI 439
A+ G+ VHCQ + G + + ++L+ +Y KCG + A R+F ++ ++WN+MI
Sbjct: 235 GALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMI 294
Query: 440 GGLAQNGRGTEVLELFEDMI-KEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYG 498
G AQ+G + +ELFE M+ K G +PD IT++GVL +C H GLV EGR++F LM E+G
Sbjct: 295 AGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA-EHG 353
Query: 499 IKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVA 558
+KP + HY+C++DLLGR +++EA L+EN + + +W LL +C D T R A
Sbjct: 354 LKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAA 413
Query: 559 RKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSEN 613
+ + LEPD ++V L N+Y +VG W +A +RKLM+D+G+K PG SWI N
Sbjct: 414 EERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINN 468
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 152/276 (55%), Gaps = 3/276 (1%)
Query: 68 ASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLA 127
+S +++C F G+ H ALK G SD ++G+SL+ LY G + A +F+ +
Sbjct: 124 SSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSG-EVENAYKVFEEMP 182
Query: 128 VRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGAC 187
R++++WT++IS + + R L+L+S+M +PN +T +++++A + L G
Sbjct: 183 ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRS 242
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRND 247
+H + G S IS++L+ MY + ++DA ++FD+ +DVV W ++I+ ++
Sbjct: 243 VHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSN-KDVVSWNSMIAGYAQHG 301
Query: 248 MFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVE 307
+ +A+ LF M G PD T+ +L++C + G +++G++ + G+ +
Sbjct: 302 LAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHY 361
Query: 308 SSLLDMYGKCGKVGQARVVFDRLGDK-NSVSWTAML 342
S L+D+ G+ G + +A + + + K NSV W ++L
Sbjct: 362 SCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 146/281 (51%), Gaps = 8/281 (2%)
Query: 165 NAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLF 224
+A+ +SS + + RD G+ H + + GF S+ + S+LV +Y + V +A K+F
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 225 DESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGW 284
+E PE +VV WTA+IS + L+L+ M + P+ +TF LL+AC G
Sbjct: 179 EEMPE-RNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTS-DPNDYTFTALLSACTGSGA 236
Query: 285 LRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSA 344
L QG+ +H + + +G+ + + +SL+ MY KCG + A +FD+ +K+ VSW +M++
Sbjct: 237 LGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAG 296
Query: 345 YCQN---KEYEAVFELVRERGVS--DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR 399
Y Q+ + +FEL+ + + D + VL +C V G++ G
Sbjct: 297 YAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKP 356
Query: 400 DVIVESALVDLYAKCGCVDFAQRLFLSMEVR-NQITWNAMI 439
++ S LVDL + G + A L +M ++ N + W +++
Sbjct: 357 ELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 95/187 (50%), Gaps = 4/187 (2%)
Query: 55 QTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGP 114
++T DPN + +LL CT + + G ++H L G+ S + NSL+++Y K G
Sbjct: 214 KSTSDPN--DYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGD 271
Query: 115 HLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLD-MEPNAFTISSVI 173
L A +FD + +D+++W S+I+ Y + G + +++LF M+ +P+A T V+
Sbjct: 272 -LKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVL 330
Query: 174 TAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDV 233
++ + G ++ G S LVD+ GR +++AL+L + P +
Sbjct: 331 SSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNS 390
Query: 234 VGWTAII 240
V W +++
Sbjct: 391 VIWGSLL 397
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 173/583 (29%), Positives = 291/583 (49%), Gaps = 28/583 (4%)
Query: 50 LLNTSQTTLDPNLKPVLYASLLQTCTKTSS----------FLHGTTLHAHALKSGI-HSD 98
L+N S + P L +++A LL+ ++ F G+ ++A L I +
Sbjct: 10 LVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKN 69
Query: 99 RFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQML 158
N L K G +L A LFD + RD+++W ++IS G +++F M
Sbjct: 70 TITWNVCLKGLFKNG-YLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQ 128
Query: 159 DLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGF-HSNTVISSALVDMYGRNRAV 217
++ P FT S + + + +R G +H I G N V+ ++++DMY R
Sbjct: 129 RWEIRPTEFTFSILASLVTCVRH---GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVF 185
Query: 218 RDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLA 277
AL +F + E DVV W +I + + + AL F M R + PD +T +++
Sbjct: 186 DYALSVF-LTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLM-REMEIQPDEYTVSMVVS 243
Query: 278 ACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVS 337
C++L L +GK+ A + +G N +V + +DM+ KC ++ + +F L +SV
Sbjct: 244 ICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVL 303
Query: 338 WTAMLSAY---CQNKEYEAVFELVRERGV-SDLYAFGTVLRACSGVAAVML--GKEVHCQ 391
+M+ +Y C ++ +F L + V D + F +VL S + AVML G +VH
Sbjct: 304 CNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVL---SSMNAVMLDHGADVHSL 360
Query: 392 YVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEV 451
++ G D V ++L+++Y K G VD A +F + ++ I WN +I GLA+N R E
Sbjct: 361 VIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVES 420
Query: 452 LELFEDMI-KEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMI 510
L +F ++ + ++PD +T +G+L AC + G V+EG + F+ M +G+ PG EHY C+I
Sbjct: 421 LAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACII 480
Query: 511 DLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHL 570
+LL R MI EA+ + + +W +L A D AE VA+ M+E EP
Sbjct: 481 ELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSF 540
Query: 571 SYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSEN 613
Y++L IY RW +++++R M + +K G S I E+
Sbjct: 541 PYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIES 583
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 169/368 (45%), Gaps = 44/368 (11%)
Query: 164 PNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKL 223
P++ S ++ + + L +HA ++ GF T + + +Y ++ +V +AL+L
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 224 FDESPE-----------------------------PE-DVVGWTAIISTLTRNDMFREAL 253
FD+ P+ PE DVV W +IS L +
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGI 121
Query: 254 RLFVAMHRGCGLVPDGFTFGTL--LAACANLGWLRQGKELHAKVVGLGICG-NVVVESSL 310
R+F M R + P FTF L L C +R G+++H + G+ N+VV +S+
Sbjct: 122 RVFFDMQRW-EIRPTEFTFSILASLVTC-----VRHGEQIHGNAICSGVSRYNLVVWNSV 175
Query: 311 LDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAV---FELVRERGVS-DL 366
+DMY + G A VF + D++ VSW ++ + + E F L+RE + D
Sbjct: 176 MDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDE 235
Query: 367 YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLS 426
Y V+ CS + + GK+ ++ G + IV A +D+++KC +D + +LF
Sbjct: 236 YTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRE 295
Query: 427 MEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEG 486
+E + + N+MIG + + G + L LF + + + PD TF VL + + ++D G
Sbjct: 296 LEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVL-SSMNAVMLDHG 354
Query: 487 RRYFALMV 494
+L++
Sbjct: 355 ADVHSLVI 362
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 153/493 (31%), Positives = 254/493 (51%), Gaps = 61/493 (12%)
Query: 173 ITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYG----RNRAVRDALKLFDESP 228
I +RDL+ +HA+ I G +T+ ++ ++ +R + A K+F++ P
Sbjct: 30 INNCRTIRDLSQ---IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMP 86
Query: 229 EPEDVVGWTAIISTLTRNDMFRE--ALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLR 286
+ + W II + +D + A+ LF M + P+ FTF ++L ACA G ++
Sbjct: 87 Q-RNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 287 QGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVF------------------- 327
+GK++H + G G+ V S+L+ MY CG + ARV+F
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205
Query: 328 --------------------------DRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRER 361
D++ ++ VSW M+S Y N ++ E+ RE
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 362 GVSDL----YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR-DVIVESALVDLYAKCGC 416
D+ +VL A S + ++ LG+ +H Y G R D ++ SAL+D+Y+KCG
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHL-YAEDSGIRIDDVLGSALIDMYSKCGI 324
Query: 417 VDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFA 476
++ A +F + N ITW+AMI G A +G+ + ++ F M + G+ P + +I +L A
Sbjct: 325 IEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTA 384
Query: 477 CSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHS 536
CSH GLV+EGRRYF+ MV G++P +EHY CM+DLLGR+ +++EAE + N + D
Sbjct: 385 CSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDV 444
Query: 537 LWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLME 596
+W LLGAC + +RVA ++++ P +YV L N+Y + G W++ E+R M+
Sbjct: 445 IWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMK 504
Query: 597 DRGVKKLPGKSWI 609
++ ++K PG S I
Sbjct: 505 EKDIRKDPGCSLI 517
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 197/436 (45%), Gaps = 62/436 (14%)
Query: 84 TTLHAHALKSGIHSDRFVGNSLLTLYLKLGPH---LPQAQTLFDSLAVRDIIAWTSLISA 140
+ +HA +KSG D +L H L A +F+ + R+ +W ++I
Sbjct: 40 SQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRG 99
Query: 141 YTRAG--RPINSLQLFSQML-DLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGF 197
++ + + + ++ LF +M+ D +EPN FT SV+ A +K + G +H + + GF
Sbjct: 100 FSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGF 159
Query: 198 HSNTVISSALVDMYGRNRAVRDALKLFDESPEPED------------------------- 232
+ + S LV MY ++DA LF ++ +D
Sbjct: 160 GGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYM 219
Query: 233 -------------------VVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFG 273
VV W +IS + N F++A+ +F M +G + P+ T
Sbjct: 220 RLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG-DIRPNYVTLV 278
Query: 274 TLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK 333
++L A + LG L G+ LH GI + V+ S+L+DMY KCG + +A VF+RL +
Sbjct: 279 SVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE 338
Query: 334 NSVSWTAMLSAYC---QNKEYEAVFELVRERGV--SDLYAFGTVLRACSGVAAVMLGKEV 388
N ++W+AM++ + Q + F +R+ GV SD+ A+ +L ACS V G+
Sbjct: 339 NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDV-AYINLLTACSHGGLVEEGRRY 397
Query: 389 HCQYVRKGGWRDVIVE-SALVDLYAKCGCVDFAQRLFLSMEVR-NQITWNAMIGGLAQNG 446
Q V G I +VDL + G +D A+ L+M ++ + + W A++G G
Sbjct: 398 FSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457
Query: 447 R---GTEVLELFEDMI 459
G V + DM+
Sbjct: 458 NVEMGKRVANILMDMV 473
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 153/337 (45%), Gaps = 50/337 (14%)
Query: 54 SQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLG 113
S ++PN + S+L+ C KT G +H ALK G D FV ++L+ +Y+ G
Sbjct: 120 SDEFVEPN--RFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCG 177
Query: 114 --------------------------------------------PHLPQAQTLFDSLAVR 129
A+ LFD + R
Sbjct: 178 FMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQR 237
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
+++W ++IS Y+ G +++++F +M D+ PN T+ SV+ A S+L L LG LH
Sbjct: 238 SVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLH 297
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMF 249
G + V+ SAL+DMY + + A+ +F+ P E+V+ W+A+I+ +
Sbjct: 298 LYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR-ENVITWSAMINGFAIHGQA 356
Query: 250 REALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGL-GICGNVVVES 308
+A+ F M R G+ P + LL AC++ G + +G+ +++V + G+ +
Sbjct: 357 GDAIDCFCKM-RQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYG 415
Query: 309 SLLDMYGKCGKVGQA-RVVFDRLGDKNSVSWTAMLSA 344
++D+ G+ G + +A + + + V W A+L A
Sbjct: 416 CMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGA 452
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 168/547 (30%), Positives = 270/547 (49%), Gaps = 38/547 (6%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
Y L++ + F G LHAH + SGI + L+T Y++ G L A+ +FD +
Sbjct: 19 YVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVL-DARKVFDEM 77
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
RDI +I A R G SL F +M ++ +AF + S++ A+ L D G
Sbjct: 78 PKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGK 137
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
+H +V+ + S+ I S+L+DMY + V +A K+F + E +D+V + A+IS N
Sbjct: 138 MIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGE-QDLVVFNAMISGYANN 196
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
EAL L M + G+ PD T+ L++ +++ + E ++
Sbjct: 197 SQADEALNLVKDM-KLLGIKPDVITWNALISGFSHMRNEEKVSE--------------IL 241
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDL 366
E LD Y + VSWT+++S N + E F+ ++ L
Sbjct: 242 ELMCLDGY-----------------KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGL 284
Query: 367 Y----AFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQR 422
Y T+L AC+ +A + GKE+H V G V SAL+D+Y KCG + A
Sbjct: 285 YPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMI 344
Query: 423 LFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGL 482
LF + +T+N+MI A +G + +ELF+ M G + D++TF +L ACSH GL
Sbjct: 345 LFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGL 404
Query: 483 VDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLL 542
D G+ F LM ++Y I P +EHY CM+DLLGRA + EA +++ D +W LL
Sbjct: 405 TDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALL 464
Query: 543 GACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKK 602
AC + A A+ + ELEP+ + +LL ++Y G W + ++K+++ + ++
Sbjct: 465 AACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRR 524
Query: 603 LPGKSWI 609
G SW+
Sbjct: 525 FLGSSWV 531
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 180/435 (41%), Gaps = 81/435 (18%)
Query: 62 LKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQT 121
L + SLL+ G +H LK SD F+ +SL+ +Y K G + A+
Sbjct: 115 LDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFG-EVGNARK 173
Query: 122 LFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRD 181
+F L +D++ + ++IS Y + +L L M L ++P+ T +++I+ S +R+
Sbjct: 174 VFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRN 233
Query: 182 LALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIS 241
V + L+L DVV WT+IIS
Sbjct: 234 --------------------------------EEKVSEILELMCLDGYKPDVVSWTSIIS 261
Query: 242 TLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGIC 301
L N +A F M GL P+ T TLL AC L +++ GKE+H V G+
Sbjct: 262 GLVHNFQNEKAFDAFKQMLTH-GLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLE 320
Query: 302 GNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRER 361
+ V S+LLDMYGKCG + +A ++F + K +V++ +M+ Y + + EL +
Sbjct: 321 DHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQM 380
Query: 362 GVS----DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCV 417
+ D F +L ACS G
Sbjct: 381 EATGEKLDHLTFTAILTACS-----------------------------------HAGLT 405
Query: 418 DFAQRLFLSMEVRNQIT-----WNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIG 472
D Q LFL M+ + +I + M+ L + G+ E E+ + M MEPD +
Sbjct: 406 DLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAM---RMEPDLFVWGA 462
Query: 473 VLFACSHTGLVDEGR 487
+L AC + G ++ R
Sbjct: 463 LLAACRNHGNMELAR 477
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 38/226 (16%)
Query: 58 LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLP 117
L PN ++ +LL CT + HG +H +++ +G+ FV ++LL +Y K G +
Sbjct: 284 LYPNSATII--TLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCG-FIS 340
Query: 118 QAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAAS 177
+A LF + + + S+I Y G +++LF QM + + T ++++T
Sbjct: 341 EAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILT--- 397
Query: 178 KLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWT 237
AC HA + G + + M + R V P E +
Sbjct: 398 --------ACSHAGLTDLG-------QNLFLLMQNKYRIV----------PRLEH---YA 429
Query: 238 AIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLG 283
++ L R EA + AM + PD F +G LLAAC N G
Sbjct: 430 CMVDLLGRAGKLVEAYEMIKAMR----MEPDLFVWGALLAACRNHG 471
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 155/464 (33%), Positives = 245/464 (52%), Gaps = 25/464 (5%)
Query: 165 NAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLF 224
N+ +++ A +++ L +HA +I G+ + + + L+ + RA+ LF
Sbjct: 8 NSAAYEAIVRAGPRVKQLQQ---VHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLF 64
Query: 225 DESPEPEDVVGWTAIISTLTRNDMFREALRL---FVAMHR---GCGLVPDGFTFGTLLAA 278
P P+D + + I ST LRL VA +R + P +TF +++ +
Sbjct: 65 LSVPLPDDFLFNSVIKST--------SKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKS 116
Query: 279 CANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSW 338
CA+L LR GK +H V G + V+++L+ Y KCG + AR VFDR+ +K+ V+W
Sbjct: 117 CADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAW 176
Query: 339 TAMLSAYCQN---KEYEAVFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVR 394
+++S + QN E VF +RE G D F ++L AC+ AV LG VH +
Sbjct: 177 NSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIIS 236
Query: 395 KGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLEL 454
+G +V + +AL++LY++CG V A+ +F M+ N W AMI +G G + +EL
Sbjct: 237 EGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVEL 296
Query: 455 FEDMIKE-GMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLL 513
F M + G P+ +TF+ VL AC+H GLV+EGR + M Y + PGVEH+ CM+D+L
Sbjct: 297 FNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDML 356
Query: 514 GRAEMIEEAESLLENADCRYDHS---LWAVLLGACTKCSDYVTAERVARKMIELEPDFHL 570
GRA ++EA + D + LW +LGAC +Y +A+++I LEPD
Sbjct: 357 GRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPG 416
Query: 571 SYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
+V+L NIY G+ ++ IR M ++K G S I EN+
Sbjct: 417 HHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENK 460
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 200/393 (50%), Gaps = 19/393 (4%)
Query: 86 LHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAG 145
+HAH + +G R + L+TL + LF S+ + D + S+I + ++
Sbjct: 28 VHAHLIVTGYGRSRSLLTKLITLACS-ARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLR 86
Query: 146 RPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISS 205
P++ + + +ML ++ P+ +T +SVI + + L L +G +H + GF +T + +
Sbjct: 87 LPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQA 146
Query: 206 ALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGL 265
ALV Y + + A ++FD PE + +V W +++S +N + EA+++F M R G
Sbjct: 147 ALVTFYSKCGDMEGARQVFDRMPE-KSIVAWNSLVSGFEQNGLADEAIQVFYQM-RESGF 204
Query: 266 VPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARV 325
PD TF +LL+ACA G + G +H ++ G+ NV + ++L+++Y +CG VG+AR
Sbjct: 205 EPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKARE 264
Query: 326 VFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRER-----GVSDLYAFGTVLRACSGVA 380
VFD++ + N +WTAM+SAY + + EL + + + F VL AC+
Sbjct: 265 VFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAG 324
Query: 381 AVMLGKEVHCQYVRKGGWR---DVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQIT--- 434
V G+ V+ + + +R V +VD+ + G +D A + ++ + T
Sbjct: 325 LVEEGRSVYKRMTK--SYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPA 382
Query: 435 -WNAMIGGLAQNGRGTEVLELFEDMIKEGMEPD 466
W AM+G + +E+ + +I +EPD
Sbjct: 383 LWTAMLGACKMHRNYDLGVEIAKRLI--ALEPD 413
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 172/323 (53%), Gaps = 9/323 (2%)
Query: 44 LRQALHLLNTSQTTLDPNLKPVLYA--SLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFV 101
LR LH + + L N+ P Y S++++C S+ G +H HA+ SG D +V
Sbjct: 85 LRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYV 144
Query: 102 GNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLD 161
+L+T Y K G + A+ +FD + + I+AW SL+S + + G ++Q+F QM +
Sbjct: 145 QAALVTFYSKCGD-MEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESG 203
Query: 162 MEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDAL 221
EP++ T S+++A ++ ++LG+ +H +IS G N + +AL+++Y R V A
Sbjct: 204 FEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAR 263
Query: 222 KLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACAN 281
++FD+ E +V WTA+IS + ++A+ LF M CG +P+ TF +L+ACA+
Sbjct: 264 EVFDKMKET-NVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAH 322
Query: 282 LGWLRQGKELHAKVV-GLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVS--- 337
G + +G+ ++ ++ + V ++DM G+ G + +A +L +
Sbjct: 323 AGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPA 382
Query: 338 -WTAMLSAYCQNKEYEAVFELVR 359
WTAML A ++ Y+ E+ +
Sbjct: 383 LWTAMLGACKMHRNYDLGVEIAK 405
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 149/494 (30%), Positives = 255/494 (51%), Gaps = 36/494 (7%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
+A +L++C LH +K G + + S++ +Y K + A+ +FD +
Sbjct: 165 FAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRV-MSDARRVFDEI 223
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
++W ++ Y G ++ +F +ML+L++ P T+SSV+ A S+ L +G
Sbjct: 224 VNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGK 283
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
+HA+ + ++TV+S+++ DMY + + A ++FD++ +D+ WT+ +S +
Sbjct: 284 VIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQT-RSKDLKSWTSAMSGYAMS 342
Query: 247 DMFREALRLFVAM-HRGC--------GLVP---------------------DGFTFGTLL 276
+ REA LF M R G V D T +L
Sbjct: 343 GLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWIL 402
Query: 277 AACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGD-KNS 335
C+ + ++ GK+ H + G NV+V ++LLDMYGKCG + A + F ++ + ++
Sbjct: 403 NVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDE 462
Query: 336 VSWTAMLSAYCQNKEYE---AVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQY 392
VSW A+L+ + E + FE ++ Y T+L C+ + A+ LGK +H
Sbjct: 463 VSWNALLTGVARVGRSEQALSFFEGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFL 522
Query: 393 VRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVL 452
+R G DV++ A+VD+Y+KC C D+A +F R+ I WN++I G +NGR EV
Sbjct: 523 IRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVF 582
Query: 453 ELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDL 512
ELF + EG++PD++TF+G+L AC G V+ G +YF+ M +Y I P VEHY+CMI+L
Sbjct: 583 ELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIEL 642
Query: 513 LGRAEMIEEAESLL 526
+ + + E L
Sbjct: 643 YCKYGCLHQLEEFL 656
Score = 205 bits (522), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 150/553 (27%), Positives = 263/553 (47%), Gaps = 52/553 (9%)
Query: 34 EILQHCKDGSLRQALHLLNTSQTTLDPNLKPV---LYASLLQTCTKTSSFLHGTTLHAHA 90
+IL+H + G++ +A+ +L S +PV LY L ++C+ + + + +H
Sbjct: 35 QILEHLEGGNVSKAVSVLFASP-------EPVSYWLYERLFRSCSSKALVVQARKVQSHL 87
Query: 91 LKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINS 150
+ F+ N + Y K G + A+ LF+ + RD +W ++I+A + G
Sbjct: 88 VTFSPLPPIFLLNRAIEAYGKCGC-VDDARELFEEMPERDGGSWNAVITACAQNGVSDEV 146
Query: 151 LQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDM 210
++F +M + + + V+ + + DL L LH V+ G+ N + +++VD+
Sbjct: 147 FRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDV 206
Query: 211 YGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGF 270
YG+ R + DA ++FDE P D V W I+ EA+ +F M + P
Sbjct: 207 YGKCRVMSDARRVFDEIVNPSD-VSWNVIVRRYLEMGFNDEAVVMFFKMLE-LNVRPLNH 264
Query: 271 TFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRL 330
T +++ AC+ L GK +HA V L + + VV +S+ DMY KC ++ AR VFD+
Sbjct: 265 TVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQT 324
Query: 331 GDKNSVSWTAMLSAYCQN---KEYEAVFELVRERGVSDLYA----------------FGT 371
K+ SWT+ +S Y + +E +F+L+ ER + A F T
Sbjct: 325 RSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLT 384
Query: 372 VLR----------------ACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCG 415
++R CSG++ V +GK+ H R G +VIV +AL+D+Y KCG
Sbjct: 385 LMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCG 444
Query: 416 CVDFAQRLFLSM-EVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVL 474
+ A F M E+R++++WNA++ G+A+ GR + L FE M E +P T +L
Sbjct: 445 TLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLL 503
Query: 475 FACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYD 534
C++ ++ G+ ++ + G K V M+D+ + + A + + A R D
Sbjct: 504 AGCANIPALNLGKAIHGFLIRD-GYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATR-D 561
Query: 535 HSLWAVLLGACTK 547
LW ++ C +
Sbjct: 562 LILWNSIIRGCCR 574
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 186/408 (45%), Gaps = 41/408 (10%)
Query: 58 LDPNLKPVLY--ASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPH 115
L+ N++P+ + +S++ C+++ + G +HA A+K + +D V S+ +Y+K
Sbjct: 255 LELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCD-R 313
Query: 116 LPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDM------------- 162
L A+ +FD +D+ +WTS +S Y +G + +LF M + ++
Sbjct: 314 LESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHA 373
Query: 163 ------------------EPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVIS 204
+ T+ ++ S + D+ +G H + G+ +N +++
Sbjct: 374 HEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVA 433
Query: 205 SALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCG 264
+AL+DMYG+ ++ A F + E D V W A+++ + R +AL F M
Sbjct: 434 NALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAK 493
Query: 265 LVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQAR 324
P +T TLLA CAN+ L GK +H ++ G +VV+ +++DMY KC A
Sbjct: 494 --PSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAI 551
Query: 325 VVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFE---LVRERGVS-DLYAFGTVLRACSGVA 380
VF ++ + W +++ C+N + VFE L+ GV D F +L+AC
Sbjct: 552 EVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREG 611
Query: 381 AVMLGKEVHCQYVRKGGWRDVIVE-SALVDLYAKCGCVDFAQRLFLSM 427
V LG + K + +++LY K GC+ + L M
Sbjct: 612 HVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLM 659
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 161/331 (48%), Gaps = 15/331 (4%)
Query: 272 FGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLG 331
+ L +C++ + Q +++ + +V + + + ++ YGKCG V AR +F+ +
Sbjct: 64 YERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMP 123
Query: 332 DKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLYA----FGTVLRACSGVAAVMLGKE 387
+++ SW A+++A QN + VF + R + A F VL++C + + L ++
Sbjct: 124 ERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQ 183
Query: 388 VHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGR 447
+HC V+ G +V +E+++VD+Y KC + A+R+F + + ++WN ++ + G
Sbjct: 184 LHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGF 243
Query: 448 GTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYN 507
E + +F M++ + P T V+ ACS + ++ G+ A+ V + V
Sbjct: 244 NDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVS-T 302
Query: 508 CMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTA--ERVARKMIELE 565
+ D+ + + +E A + + + D W + S Y + R AR++ +L
Sbjct: 303 SVFDMYVKCDRLESARRVFDQTRSK-DLKSWT------SAMSGYAMSGLTREARELFDLM 355
Query: 566 PDFHL-SYVLLGNIYRAVGRWNDAMEIRKLM 595
P+ ++ S+ + Y W++A++ LM
Sbjct: 356 PERNIVSWNAMLGGYVHAHEWDEALDFLTLM 386
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 211/379 (55%), Gaps = 7/379 (1%)
Query: 236 WTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV 295
W I+ + R++ +A+++++ M R ++PD ++ ++ A + GKELH+
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRST-VLPDRYSLPIVIKAAVQIHDFTLGKELHSVA 143
Query: 296 VGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQ----NKEY 351
V LG G+ ES + +Y K G+ AR VFD ++ SW A++ N+
Sbjct: 144 VRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAV 203
Query: 352 EAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVH-CQYVRKGGWR-DVIVESALVD 409
E ++ R D + +V +C G+ + L ++H C K + D+++ ++L+D
Sbjct: 204 EMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLID 263
Query: 410 LYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYIT 469
+Y KCG +D A +F M RN ++W++MI G A NG E LE F M + G+ P+ IT
Sbjct: 264 MYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKIT 323
Query: 470 FIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENA 529
F+GVL AC H GLV+EG+ YFA+M E+ ++PG+ HY C++DLL R ++EA+ ++E
Sbjct: 324 FVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEM 383
Query: 530 DCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAM 589
+ + +W L+G C K D AE VA M+ELEP YV+L N+Y G W D
Sbjct: 384 PMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVE 443
Query: 590 EIRKLMEDRGVKKLPGKSW 608
+RKLM+ + V K+P S+
Sbjct: 444 RVRKLMKTKKVAKIPAYSY 462
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 192/412 (46%), Gaps = 51/412 (12%)
Query: 49 HLLNTSQ---TTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSL 105
H + TS T L P + L A+LL CT S +H +S I
Sbjct: 29 HFVTTSSSSVTPLSPQDRNKLLATLLSNCT---SLARVRRIHGDIFRSRI---------- 75
Query: 106 LTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPN 165
L Q F W +++ +Y R P++++Q++ M+ + P+
Sbjct: 76 ----------LDQYPIAF---------LWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPD 116
Query: 166 AFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFD 225
+++ VI AA ++ D LG LH++ + GF + S + +Y + +A K+FD
Sbjct: 117 RYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFD 176
Query: 226 ESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWL 285
E+PE + W AII L EA+ +FV M R GL PD FT ++ A+C LG L
Sbjct: 177 ENPE-RKLGSWNAIIGGLNHAGRANEAVEMFVDMKRS-GLEPDDFTMVSVTASCGGLGDL 234
Query: 286 RQGKELHAKVVGLGI--CGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLS 343
+LH V+ ++++ +SL+DMYGKCG++ A +F+ + +N VSW++M+
Sbjct: 235 SLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIV 294
Query: 344 AYCQN-KEYEAV--FELVRERGV-SDLYAFGTVLRACSGVAAVMLGKE----VHCQYVRK 395
Y N EA+ F +RE GV + F VL AC V GK + ++ +
Sbjct: 295 GYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELE 354
Query: 396 GGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR-NQITWNAMIGGLAQNG 446
G +VDL ++ G + A+++ M ++ N + W ++GG + G
Sbjct: 355 PGLSHY---GCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFG 403
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 207/372 (55%), Gaps = 18/372 (4%)
Query: 251 EALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSL 310
E RLF ++ R L + + L C G L G ++H K+ G + ++ ++L
Sbjct: 95 EGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTL 154
Query: 311 LDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFEL-----------VR 359
+D+Y C A VFD + +++VSW + S Y +NK V L V+
Sbjct: 155 MDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVK 214
Query: 360 ERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVI-VESALVDLYAKCGCVD 418
GV+ L A L+AC+ + A+ GK+VH ++ + G + + + LV +Y++CG +D
Sbjct: 215 PDGVTCLLA----LQACANLGALDFGKQVH-DFIDENGLSGALNLSNTLVSMYSRCGSMD 269
Query: 419 FAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACS 478
A ++F M RN ++W A+I GLA NG G E +E F +M+K G+ P+ T G+L ACS
Sbjct: 270 KAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACS 329
Query: 479 HTGLVDEGRRYFALMVD-EYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSL 537
H+GLV EG +F M E+ IKP + HY C++DLLGRA ++++A SL+++ + + D ++
Sbjct: 330 HSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTI 389
Query: 538 WAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMED 597
W LLGAC D ERV +IEL+ + YVLL N Y VG+W E+R LM++
Sbjct: 390 WRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKE 449
Query: 598 RGVKKLPGKSWI 609
+ + PG S I
Sbjct: 450 KRIHTKPGCSAI 461
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 194/409 (47%), Gaps = 21/409 (5%)
Query: 70 LLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLT-LYLKLGPH-LPQAQTLFDSLA 127
LL ++ LH +HA L++ + + V + L+ L L L P + + +F
Sbjct: 14 LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRL 73
Query: 128 VRDIIAWTSLISAYTRAGRPINSLQLFSQML-DLDMEPNAFTISSVITAASKLRDLALGA 186
+ ++I A++ + P +LF + + + N + S + K DL G
Sbjct: 74 NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
+H + S GF S++++ + L+D+Y DA K+FDE P+ D V W + S RN
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPK-RDTVSWNVLFSCYLRN 192
Query: 247 DMFREALRLFVAMHR---GCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGN 303
R+ L LF M GC + PDG T L ACANLG L GK++H + G+ G
Sbjct: 193 KRTRDVLVLFDKMKNDVDGC-VKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGA 251
Query: 304 VVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRE 360
+ + ++L+ MY +CG + +A VF + ++N VSWTA++S N KE F + +
Sbjct: 252 LNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLK 311
Query: 361 RGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR---DVIVESALVDLYAKCGC 416
G+S + +L ACS V G + +R G ++ ++ +VDL +
Sbjct: 312 FGISPEEQTLTGLLSACSHSGLVAEGM-MFFDRMRSGEFKIKPNLHHYGCVVDLLGRARL 370
Query: 417 VDFAQRLFLSMEVRNQIT-WNAMIGGLAQNGRGTEVLELFEDMIKEGME 464
+D A L SME++ T W ++G +G +EL E +I +E
Sbjct: 371 LDKAYSLIKSMEMKPDSTIWRTLLGACRVHGD----VELGERVISHLIE 415
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 146/512 (28%), Positives = 262/512 (51%), Gaps = 47/512 (9%)
Query: 103 NSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQM-LDLD 161
+S++ Y K+G + A++LFD + R++I WT++I Y +AG + LF +M + D
Sbjct: 212 SSMVHGYCKMG-RIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGD 270
Query: 162 MEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDAL 221
++ N+ T++ + A G+ +H +V + + ++L+ MY + + +A
Sbjct: 271 VKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAK 330
Query: 222 KLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACAN 281
+F + +D V W ++I+ L + EA LF M
Sbjct: 331 AVFG-VMKNKDSVSWNSLITGLVQRKQISEAYELFEKM---------------------- 367
Query: 282 LGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAM 341
GK++ V + ++ + G++ + +F + +K++++WTAM
Sbjct: 368 -----PGKDM-------------VSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAM 409
Query: 342 LSAYCQNKEYEAVF----ELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGG 397
+SA+ N YE +++++ + Y F +VL A + +A ++ G ++H + V+
Sbjct: 410 ISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNI 469
Query: 398 WRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFED 457
D+ V+++LV +Y KCG + A ++F + N +++N MI G + NG G + L+LF
Sbjct: 470 VNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSM 529
Query: 458 MIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAE 517
+ G EP+ +TF+ +L AC H G VD G +YF M Y I+PG +HY CM+DLLGR+
Sbjct: 530 LESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSG 589
Query: 518 MIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGN 577
++++A +L+ C+ +W LL A AE A+K+IELEPD YV+L
Sbjct: 590 LLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQ 649
Query: 578 IYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
+Y +G+ D I + + + +KK PG SWI
Sbjct: 650 LYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWI 681
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 195/468 (41%), Gaps = 103/468 (22%)
Query: 76 KTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWT 135
KT +FL TT F NS ++ + + G +L +A+ +F ++ R I++W
Sbjct: 36 KTRNFLETTTTSTAI---------FQCNSQISKHARNG-NLQEAEAIFRQMSNRSIVSWI 85
Query: 136 SLISAYTRAGRPINSLQLFSQM---------------------------LDLDM-EPNAF 167
++ISAY G+ + Q+F +M L D+ E NA
Sbjct: 86 AMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAV 145
Query: 168 TISSVITA-----------------ASKLRD-----------LALGACLHAMVISRGFHS 199
+ +++IT K RD L G A+ + +G
Sbjct: 146 SYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAV 205
Query: 200 NTVIS-SALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVA 258
V+S S++V Y + + DA LFD E +V+ WTA+I + F + LF+
Sbjct: 206 KEVVSCSSMVHGYCKMGRIVDARSLFDRMTE-RNVITWTAMIDGYFKAGFFEDGFGLFLR 264
Query: 259 MHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCG 318
M + + + T + AC + R+G ++H V + + ++ + +SL+ MY K G
Sbjct: 265 MRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLG 324
Query: 319 KVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLYAFGTVLRACSG 378
+G+A+ VF + +K+SVSW ++++ Q K+ +EL + D+ ++ +++ SG
Sbjct: 325 YMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSG 384
Query: 379 VAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAM 438
+ CV+ LF M ++ ITW AM
Sbjct: 385 KGEI-------------------------------SKCVE----LFGMMPEKDNITWTAM 409
Query: 439 IGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEG 486
I NG E L F M+++ + P+ TF VL A + + EG
Sbjct: 410 ISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEG 457
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 132/304 (43%), Gaps = 31/304 (10%)
Query: 308 SSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLY 367
+S + + + G + +A +F ++ +++ VSW AM+SAY +N + +++ E V
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 368 AFGTVLRACSGVAAVMLGK--EVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFL 425
++ ++ A LGK E+ C K + + + ++ + + G D A+ L+
Sbjct: 114 SYNAMITAMIK-NKCDLGKAYELFCDIPEK----NAVSYATMITGFVRAGRFDEAEFLYA 168
Query: 426 SMEV--RNQITWNAMIGGLAQNGRGTEVLELFEDM-IKEGMEPDYITFIGVLFACSHTGL 482
V R+ + N ++ G + G+ E + +F+ M +KE ++ ++ G
Sbjct: 169 ETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKE-----VVSCSSMVHGYCKMGR 223
Query: 483 VDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLL----ENADCRYDHSLW 538
+ + R F M + V + MID +A E+ L + D + + +
Sbjct: 224 IVDARSLFDRMTER-----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTL 278
Query: 539 AVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGN----IYRAVGRWNDAMEIRKL 594
AV+ AC Y ++ + + +F L LGN +Y +G +A + +
Sbjct: 279 AVMFKACRDFVRYREGSQIHGLVSRMPLEFDL---FLGNSLMSMYSKLGYMGEAKAVFGV 335
Query: 595 MEDR 598
M+++
Sbjct: 336 MKNK 339
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 242/451 (53%), Gaps = 45/451 (9%)
Query: 202 VISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHR 261
V++ L Y + +R +L LF ++ +P D+ +TA I+T + N + +A L+V +
Sbjct: 65 VLNLKLHRAYASHGKIRHSLALFHQTIDP-DLFLFTAAINTASINGLKDQAFLLYVQL-L 122
Query: 262 GCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVG 321
+ P+ FTF +LL +C+ + GK +H V+ G+ + V + L+D+Y K G V
Sbjct: 123 SSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVV 178
Query: 322 QARVVFDRLGDKNSVSWTAMLSAYCQNKEYEA---VFELVRERGV--------------- 363
A+ VFDR+ +++ VS TAM++ Y + EA +F+ + ER +
Sbjct: 179 SAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGF 238
Query: 364 --------SDLYAFG----------TVLRACSGVAAVMLGKEVHCQYVRKGGWR-DVIVE 404
L A G L ACS + A+ G+ +H +V+ R +V V
Sbjct: 239 PNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHV-FVKSSRIRLNVKVC 297
Query: 405 SALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIK-EGM 463
+ L+D+Y+KCG ++ A +F ++ + WNAMI G A +G + L LF +M G+
Sbjct: 298 TGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGL 357
Query: 464 EPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAE 523
+P ITFIG L AC+H GLV+EG R F M EYGIKP +EHY C++ LLGRA ++ A
Sbjct: 358 QPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAY 417
Query: 524 SLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVG 583
++N + D LW+ +LG+C D+V + +A +I L YVLL NIY +VG
Sbjct: 418 ETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVG 477
Query: 584 RWNDAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
+ ++R LM+++G+ K PG S I EN+
Sbjct: 478 DYEGVAKVRNLMKEKGIVKEPGISTIEIENK 508
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 166/338 (49%), Gaps = 43/338 (12%)
Query: 40 KDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDR 99
KD + + LL++ ++PN ++SLL++C+ S G +H H LK G+ D
Sbjct: 111 KDQAFLLYVQLLSSE---INPN--EFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDP 161
Query: 100 FVGNSLLTLYLKLG---------PHLPQ---------------------AQTLFDSLAVR 129
+V L+ +Y K G +P+ A+ LFDS+ R
Sbjct: 162 YVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCER 221
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQML-DLDMEPNAFTISSVITAASKLRDLALGACL 188
DI++W +I Y + G P ++L LF ++L + +P+ T+ + ++A S++ L G +
Sbjct: 222 DIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWI 281
Query: 189 HAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDM 248
H V S N + + L+DMY + ++ +A+ +F+++P +D+V W A+I+ +
Sbjct: 282 HVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR-KDIVAWNAMIAGYAMHGY 340
Query: 249 FREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV-VGLGICGNVVVE 307
++ALRLF M GL P TF L ACA+ G + +G + + GI +
Sbjct: 341 SQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY 400
Query: 308 SSLLDMYGKCGKVGQARVVFDRLG-DKNSVSWTAMLSA 344
L+ + G+ G++ +A + D +SV W+++L +
Sbjct: 401 GCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGS 438
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 160/372 (43%), Gaps = 44/372 (11%)
Query: 122 LFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRD 181
LF D+ +T+ I+ + G + L+ Q+L ++ PN FT SS++ + S
Sbjct: 86 LFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS- 144
Query: 182 LALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPE------------ 229
G +H V+ G + +++ LVD+Y + V A K+FD PE
Sbjct: 145 ---GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITC 201
Query: 230 ------------------PEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFT 271
D+V W +I ++ +AL LF + PD T
Sbjct: 202 YAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEIT 261
Query: 272 FGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLG 331
L+AC+ +G L G+ +H V I NV V + L+DMY KCG + +A +VF+
Sbjct: 262 VVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP 321
Query: 332 DKNSVSWTAMLSAYCQNKEYEAVFELVRE-RGVSDL----YAFGTVLRACSGVAAVMLGK 386
K+ V+W AM++ Y + + L E +G++ L F L+AC+ V G
Sbjct: 322 RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGI 381
Query: 387 EVHCQYVRKGGWRDVIVE-SALVDLYAKCGCVDFAQRLFLSMEV-RNQITWNAMIGGLAQ 444
+ ++ G + I LV L + G + A +M + + + W++++G
Sbjct: 382 RIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKL 441
Query: 445 NGR---GTEVLE 453
+G G E+ E
Sbjct: 442 HGDFVLGKEIAE 453
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 242/445 (54%), Gaps = 15/445 (3%)
Query: 163 EPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALK 222
EP F +S++ LR + G +H ++ +N ISS LV +Y A +
Sbjct: 91 EPEIF--ASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHE 148
Query: 223 LFDE-SPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACAN 281
+FD S W ++IS + +A+ L+ M G+ PD FTF +L AC
Sbjct: 149 VFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAED-GVKPDRFTFPRVLKACGG 207
Query: 282 LGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAM 341
+G ++ G+ +H +V G +V V ++L+ MY KCG + +AR VFD + K+ VSW +M
Sbjct: 208 IGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSM 267
Query: 342 LSAYCQN---KEYEAVFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGG 397
L+ Y + E +F L+ + G+ D A +VL + V + G+++H +R+G
Sbjct: 268 LTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGM 324
Query: 398 WRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFED 457
++ V +AL+ LY+K G + A +F M R+ ++WNA+I ++N G L+ FE
Sbjct: 325 EWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG---LKYFEQ 381
Query: 458 MIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAE 517
M + +PD ITF+ VL C++TG+V++G R F+LM EYGI P +EHY CM++L GRA
Sbjct: 382 MHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAG 441
Query: 518 MIEEAESLL-ENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLG 576
M+EEA S++ + ++W LL AC + E A+++ ELEPD ++ LL
Sbjct: 442 MMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLI 501
Query: 577 NIYRAVGRWNDAMEIRKLMEDRGVK 601
IY R D +R++M DRG++
Sbjct: 502 RIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 208/411 (50%), Gaps = 16/411 (3%)
Query: 63 KPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTL 122
+P ++ASLL+TC + HG +H + ++ + + L+ LY G + A +
Sbjct: 91 EPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCG-YAEVAHEV 149
Query: 123 FDSLAVRD--IIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLR 180
FD ++ RD AW SLIS Y G+ +++ L+ QM + ++P+ FT V+ A +
Sbjct: 150 FDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIG 209
Query: 181 DLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAII 240
+ +G +H ++ GF + + +ALV MY + + A +FD P +D V W +++
Sbjct: 210 SVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPH-KDYVSWNSML 268
Query: 241 STLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGI 300
+ + + EAL +F M + G+ PD ++LA + + G++LH V+ G+
Sbjct: 269 TGYLHHGLLHEALDIFRLMVQN-GIEPDKVAISSVLARVLS---FKHGRQLHGWVIRRGM 324
Query: 301 CGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFE-LVR 359
+ V ++L+ +Y K G++GQA +FD++ ++++VSW A++SA+ +N FE + R
Sbjct: 325 EWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGLKYFEQMHR 384
Query: 360 ERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESA-LVDLYAKCGCVD 418
D F +VL C+ V G+ + ++ G + A +V+LY + G ++
Sbjct: 385 ANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMME 444
Query: 419 FAQRLF---LSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPD 466
A + + +E W A++ +G T++ E+ + E +EPD
Sbjct: 445 EAYSMIVQEMGLEA-GPTVWGALLYACYLHG-NTDIGEVAAQRLFE-LEPD 492
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 163/540 (30%), Positives = 268/540 (49%), Gaps = 10/540 (1%)
Query: 76 KTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWT 135
K + L+ LH+ KS + D + L Y L L A+ LFD R + W
Sbjct: 17 KIQTRLNTQKLHSFVTKSKLARDPYFATQLARFY-ALNDDLISARKLFDVFPERSVFLWN 75
Query: 136 SLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISR 195
S+I AY +A + L LFSQ+L D P+ FT + + S+ D C+H + I
Sbjct: 76 SIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVS 135
Query: 196 GFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRL 255
G + + SA+V Y + + +A KLF P+P D+ W +I + + + L
Sbjct: 136 GLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDP-DLALWNVMILGYGCCGFWDKGINL 194
Query: 256 FVAM-HRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMY 314
F M HRG P+ +T L + + L +HA + + + + V +L++MY
Sbjct: 195 FNLMQHRG--HQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMY 252
Query: 315 GKCGKVGQARVVFDRLGDKNSVSWTAMLSAY--CQN-KEYEAVFELVRERGVS-DLYAFG 370
+C + A VF+ + + + V+ +++++ Y C N KE +F +R G D
Sbjct: 253 SRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVA 312
Query: 371 TVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR 430
VL +C+ ++ + GKEVH +R G D+ V SAL+D+Y+KCG + A LF + +
Sbjct: 313 IVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEK 372
Query: 431 NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYF 490
N +++N++I GL +G + E F ++++ G+ PD ITF +L C H+GL+++G+ F
Sbjct: 373 NIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIF 432
Query: 491 ALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSD 550
M E+GI+P EHY M+ L+G A +EEA + + D + LL C +
Sbjct: 433 ERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHEN 492
Query: 551 YVTAERVARKMIELEPDFHLSY-VLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
AE VA + + + Y V+L N+Y GRW++ +R + + KLPG SW
Sbjct: 493 THLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISWF 552
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 176/632 (27%), Positives = 283/632 (44%), Gaps = 100/632 (15%)
Query: 69 SLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKL---------------- 112
S L +C ++ G +H LKSG+ S+ ++ NS+L +Y K
Sbjct: 46 SALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKL 105
Query: 113 --------------GPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQML 158
L A LFD + R +++T+LI Y + + +++LF +M
Sbjct: 106 DSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR 165
Query: 159 DLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVR 218
+L + N T+++VI+A S L + L ++ I +S+ L+ MY ++
Sbjct: 166 NLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLK 225
Query: 219 DALKLFDESPE------------------------------PEDVVGWTAIISTLTRNDM 248
DA KLFDE PE +D+V W +I R +
Sbjct: 226 DARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQ 285
Query: 249 FREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVES 308
EAL + M R CG+ P LL+A A +G +LH +V G +++
Sbjct: 286 LDEALVYYTEMLR-CGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQA 344
Query: 309 SLLDMYG-------------------------------KCGKVGQARVVFDRLGDKNSVS 337
+++ Y K G V QAR VFD+ DK+ S
Sbjct: 345 TIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFS 404
Query: 338 WTAMLSAYCQNKEYEAVFELVRERGVS-----DLYAFGTVLRACSGVAAVMLGKEVHCQY 392
W AM+S Y Q+ + L RE S D +V A S + ++ GK H
Sbjct: 405 WNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL 464
Query: 393 VRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQIT---WNAMIGGLAQNGRGT 449
+ + +A++D+YAKCG ++ A +F + + T WNA+I G A +G
Sbjct: 465 NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAK 524
Query: 450 EVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCM 509
L+L+ D+ ++P+ ITF+GVL AC H GLV+ G+ YF M ++GI+P ++HY CM
Sbjct: 525 LALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCM 584
Query: 510 IDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFH 569
+DLLG+A +EEA+ +++ + D +W +LL A + AE A ++ ++P
Sbjct: 585 VDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHG 644
Query: 570 LSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
V+L N+Y GRW D +R+ M R V+
Sbjct: 645 GCKVMLSNVYADAGRWEDVALVREEMRTRDVE 676
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 150/311 (48%), Gaps = 18/311 (5%)
Query: 50 LLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIH----------SDR 99
LL+ S ++ + L+ ++++ FL T +H +A+ + I D
Sbjct: 311 LLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDH 370
Query: 100 FVG-NSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQML 158
N+L+ ++K G + QA+ +FD +DI +W ++IS Y ++ P +L LF +M+
Sbjct: 371 IASRNALIAGFVKNG-MVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMI 429
Query: 159 -DLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAV 217
++P+A T+ SV +A S L L G H + N +++A++DMY + ++
Sbjct: 430 SSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSI 489
Query: 218 RDALKLFDESPE--PEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTL 275
AL +F ++ + W AII + + AL L+ + + + P+ TF +
Sbjct: 490 ETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDL-QSLPIKPNSITFVGV 548
Query: 276 LAACANLGWLRQGKE-LHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKN 334
L+AC + G + GK + GI ++ ++D+ GK G++ +A+ + ++ K
Sbjct: 549 LSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKA 608
Query: 335 SVS-WTAMLSA 344
V W +LSA
Sbjct: 609 DVMIWGMLLSA 619
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 110/272 (40%), Gaps = 65/272 (23%)
Query: 338 WTAMLSAYCQNKEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGG 397
W L A C + F+ E ++ A + L +C+ V G+++HC+ ++ G
Sbjct: 14 WVISLQARCFSAPSRTHFDFSGESSDTE-RALVSALGSCASSNDVTCGRQIHCRVLKSGL 72
Query: 398 WRDVIVESALVDLYAKCGCVDFAQ-------------------------------RLFLS 426
+ + ++++++YAKC + A+ +LF
Sbjct: 73 DSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDV 132
Query: 427 MEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG----- 481
M R+ +++ +I G AQN + +E +ELF +M G+ + +T V+ ACSH G
Sbjct: 133 MPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDC 192
Query: 482 ---------LVDEGRRYFAL-----------------MVDEYGIKPGVEHYNCMIDLLGR 515
L EGR + + + DE + V +N M++ +
Sbjct: 193 RMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVT-WNVMLNGYSK 251
Query: 516 AEMIEEAESLLENADCRYDHSLWAVLLGACTK 547
A +IE+AE L + D W ++ C +
Sbjct: 252 AGLIEQAEELFDQIT-EKDIVSWGTMIDGCLR 282
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/472 (30%), Positives = 244/472 (51%), Gaps = 39/472 (8%)
Query: 174 TAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDV 233
T S +R+L +HA +I G S+TV +S ++ + + + L ++
Sbjct: 33 TQCSTMRELKQ---IHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNP 89
Query: 234 VGWTAIISTLTRNDMFREALRLFVAMHRGCGLV-PDGFTFGTLLAACANLGWLRQGKELH 292
W II +R+ A+ +F+ M V P T+ ++ A LG R G++LH
Sbjct: 90 FVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLH 149
Query: 293 AKVVGLGICGNVVVESSLLDMY-------------------------------GKCGKVG 321
V+ G+ + + +++L MY KCG +
Sbjct: 150 GMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLID 209
Query: 322 QARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLYAFG----TVLRACS 377
QA+ +FD + +N VSW +M+S + +N ++ ++ RE D+ G ++L AC+
Sbjct: 210 QAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACA 269
Query: 378 GVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNA 437
+ A G+ +H VR + IV +AL+D+Y KCGC++ +F + WN+
Sbjct: 270 YLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNS 329
Query: 438 MIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEY 497
MI GLA NG ++LF ++ + G+EPD ++FIGVL AC+H+G V +F LM ++Y
Sbjct: 330 MILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKY 389
Query: 498 GIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERV 557
I+P ++HY M+++LG A ++EEAE+L++N D +W+ LL AC K + A+R
Sbjct: 390 MIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRA 449
Query: 558 ARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
A+ + +L+PD YVLL N Y + G + +A+E R LM++R ++K G S I
Sbjct: 450 AKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSI 501
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 156/319 (48%), Gaps = 36/319 (11%)
Query: 60 PNLKP--VLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLP 117
P++KP + Y S+ + + G LH +K G+ D F+ N++L +Y+ G +
Sbjct: 120 PSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIE 179
Query: 118 ------------------------------QAQTLFDSLAVRDIIAWTSLISAYTRAGRP 147
QAQ LFD + R+ ++W S+IS + R GR
Sbjct: 180 AWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRF 239
Query: 148 INSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSAL 207
++L +F +M + D++P+ FT+ S++ A + L G +H ++ F N+++ +AL
Sbjct: 240 KDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTAL 299
Query: 208 VDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVP 267
+DMY + + + L +F+ +P+ + + W ++I L N A+ LF + R GL P
Sbjct: 300 IDMYCKCGCIEEGLNVFECAPKKQ-LSCWNSMILGLANNGFEERAMDLFSELERS-GLEP 357
Query: 268 DGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLL-DMYGKCGKVGQARVV 326
D +F +L ACA+ G + + E + + + +L+ ++ G G + +A +
Sbjct: 358 DSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEAL 417
Query: 327 FDRLG-DKNSVSWTAMLSA 344
+ ++++V W+++LSA
Sbjct: 418 IKNMPVEEDTVIWSSLLSA 436
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 173/411 (42%), Gaps = 41/411 (9%)
Query: 75 TKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAW 134
T+ S+ +HA +K+G+ SD + +L + A +F + ++ W
Sbjct: 33 TQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVW 92
Query: 135 TSLISAYTRAGRPINSLQLFSQML--DLDMEPNAFTISSVITAASKLRDLALGACLHAMV 192
++I ++R+ P ++ +F ML ++P T SV A +L G LH MV
Sbjct: 93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMV 152
Query: 193 ISRGFHSNTVISSALVDMY-------------------------------GRNRAVRDAL 221
I G ++ I + ++ MY + + A
Sbjct: 153 IKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQ 212
Query: 222 KLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACAN 281
LFDE P+ + V W ++IS RN F++AL +F M + PDGFT +LL ACA
Sbjct: 213 NLFDEMPQ-RNGVSWNSMISGFVRNGRFKDALDMFREMQEK-DVKPDGFTMVSLLNACAY 270
Query: 282 LGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAM 341
LG QG+ +H +V N +V ++L+DMY KCG + + VF+ K W +M
Sbjct: 271 LGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSM 330
Query: 342 LSAYCQNKEYEAVFELVRERGVS----DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGG 397
+ N E +L E S D +F VL AC+ V E K
Sbjct: 331 ILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYM 390
Query: 398 WRDVIVESAL-VDLYAKCGCVDFAQRLFLSMEV-RNQITWNAMIGGLAQNG 446
I L V++ G ++ A+ L +M V + + W++++ + G
Sbjct: 391 IEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIG 441
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/466 (32%), Positives = 243/466 (52%), Gaps = 42/466 (9%)
Query: 189 HAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAI--ISTLTRN 246
H +I G + + + + ++ +R A +F P P + T I +S L
Sbjct: 35 HCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEP 94
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
+ A+ ++ + C PD FTF +L + + G+++H +VV G +V V
Sbjct: 95 NAHSIAITVYRKLWALCA-KPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHV 153
Query: 307 ESSLLDMYGKCGKVGQARVVFD------------------RLGD---------------K 333
+ L+ MY CG +G AR +FD ++G+ +
Sbjct: 154 VTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVR 213
Query: 334 NSVSWTAMLSAYCQN---KEYEAVFE-LVRERGVSDLYAFGTVLRACSGVAAVMLGKEVH 389
N VSWT ++S Y ++ E VF+ ++ E D VL AC+ + ++ LG+ +
Sbjct: 214 NEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERI- 272
Query: 390 CQYV-RKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRG 448
C YV +G R V + +A++D+YAK G + A +F + RN +TW +I GLA +G G
Sbjct: 273 CSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHG 332
Query: 449 TEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNC 508
E L +F M+K G+ P+ +TFI +L ACSH G VD G+R F M +YGI P +EHY C
Sbjct: 333 AEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGC 392
Query: 509 MIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDF 568
MIDLLGRA + EA+ ++++ + + ++W LL A D ER ++I+LEP+
Sbjct: 393 MIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNN 452
Query: 569 HLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
+Y+LL N+Y +GRW+++ +R +M+ GVKK+ G+S I EN+
Sbjct: 453 SGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENR 498
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 155/273 (56%), Gaps = 12/273 (4%)
Query: 98 DRFVGNSLLTLYLKLGPHLPQAQTLFDSLA--VRDIIAWTSLISAYTRAGRPINSLQLFS 155
D V N+LL Y K+G + +A++L + + VR+ ++WT +IS Y ++GR ++++F
Sbjct: 181 DVNVWNALLAGYGKVG-EMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQ 239
Query: 156 QMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNR 215
+ML ++EP+ T+ +V++A + L L LG + + V RG + +++A++DMY ++
Sbjct: 240 RMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSG 299
Query: 216 AVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTL 275
+ AL +F E +VV WT II+ L + EAL +F M + G+ P+ TF +
Sbjct: 300 NITKALDVF-ECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKA-GVRPNDVTFIAI 357
Query: 276 LAACANLGWLRQGKELHAKVVG-LGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK- 333
L+AC+++GW+ GK L + GI N+ ++D+ G+ GK+ +A V + K
Sbjct: 358 LSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKA 417
Query: 334 NSVSWTAMLSAYCQNKEYEAVFELVRERGVSDL 366
N+ W ++L+A + + E + ER +S+L
Sbjct: 418 NAAIWGSLLAASNVHHDLE-----LGERALSEL 445
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 178/412 (43%), Gaps = 49/412 (11%)
Query: 77 TSSFLHGTTL------HAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRD 130
TS +HG L H + + +G++ D + G HL A ++F +
Sbjct: 19 TSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAG-HLRYAYSVFTHQPCPN 77
Query: 131 IIAWTSLISAYTRAGRPIN---SLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGAC 187
++I A + P ++ ++ ++ L +P+ FT V+ A ++ D+ G
Sbjct: 78 TYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQ 137
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPE---------------- 231
+H V+ GF S+ + + L+ MY + DA K+FDE +
Sbjct: 138 IHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGE 197
Query: 232 ----------------DVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTL 275
+ V WT +IS ++ EA+ +F M + PD T +
Sbjct: 198 MDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLME-NVEPDEVTLLAV 256
Query: 276 LAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNS 335
L+ACA+LG L G+ + + V G+ V + ++++DMY K G + +A VF+ + ++N
Sbjct: 257 LSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNV 316
Query: 336 VSWTAM---LSAYCQNKEYEAVFELVRERGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQ 391
V+WT + L+ + E A+F + + GV + F +L ACS V V LGK +
Sbjct: 317 VTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNS 376
Query: 392 YVRKGGWRDVIVE-SALVDLYAKCGCVDFAQRLFLSMEVR-NQITWNAMIGG 441
K G I ++DL + G + A + SM + N W +++
Sbjct: 377 MRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAA 428
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 160/607 (26%), Positives = 299/607 (49%), Gaps = 61/607 (10%)
Query: 59 DPNLKPVLYASLLQTCT---KTSSFLHGTTLHAHAL-KSGIHSDRFVGNSLLTLYLKLGP 114
+PN + A++L C K + G +H++ + +S + + FV NSL++ YL++G
Sbjct: 221 EPNYATI--ANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVG- 277
Query: 115 HLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDL-DMEPNAFTISSVI 173
+ +A +LF + +D+++W +I+ Y + QLF ++ D+ P++ TI S++
Sbjct: 278 RIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISIL 337
Query: 174 TAASKLRDLALGACLHAMVISRGFH-SNTVISSALVDMYGRNRAVRDALKLFDESPEPED 232
++L DLA G +H+ ++ + +T + +AL+ Y R A F +D
Sbjct: 338 PVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLM-STKD 396
Query: 233 VVGWTAIISTLTRNDMFREALRLF-----VAMHRGCGLVPDGFTFGTLLAACANLGWLRQ 287
++ W AI+ D F ++ + F + + D T +LL C N+ + +
Sbjct: 397 IISWNAIL------DAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGK 450
Query: 288 GKELHAKVVGLGICGN---VVVESSLLDMYGKCGKVGQARVVFDRLGDKNS-VSWTAMLS 343
KE+H V G+ + + ++LLD Y KCG V A +F L ++ + VS+ ++LS
Sbjct: 451 VKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLS 510
Query: 344 AYCQNKEYEAVFELVRERGVSDLYAFGTVLR----------------------------- 374
Y + ++ L E +DL + ++R
Sbjct: 511 GYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVT 570
Query: 375 ------ACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSME 428
C+ +A++ L ++ H Y+ +GG D+ ++ L+D+YAKCG + A +F S
Sbjct: 571 IMNLLPVCAQLASLHLVRQCH-GYIIRGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDA 629
Query: 429 VRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRR 488
R+ + + AM+ G A +GRG E L ++ M + ++PD++ +L AC H GL+ +G +
Sbjct: 630 RRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQ 689
Query: 489 YFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKC 548
+ + +G+KP +E Y C +DL+ R +++A S + + ++W LL ACT
Sbjct: 690 IYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTY 749
Query: 549 SDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSW 608
+ VA +++ E D ++VL+ N+Y A +W ME+R LM+ + +KK G SW
Sbjct: 750 NRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSW 809
Query: 609 IGSENQK 615
+ + Q+
Sbjct: 810 LEVDGQR 816
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 221/428 (51%), Gaps = 16/428 (3%)
Query: 45 RQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNS 104
R+ + +P V +A +L C + +G ++H++ +K+G+ D VGN+
Sbjct: 103 RETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNA 162
Query: 105 LLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEP 164
L+++Y K G P A T FD +A +D+++W ++I+ ++ ++ + F ML EP
Sbjct: 163 LVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEP 222
Query: 165 NAFTISSVI-TAASKLRDLAL--GACLHAMVISRGF-HSNTVISSALVDMYGRNRAVRDA 220
N TI++V+ AS +++A G +H+ V+ R + ++ + ++LV Y R + +A
Sbjct: 223 NYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEA 282
Query: 221 LKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAM-HRGCGLVPDGFTFGTLLAAC 279
LF +D+V W +I+ N + +A +LF + H+G + PD T ++L C
Sbjct: 283 ASLFTRMGS-KDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKG-DVSPDSVTIISILPVC 340
Query: 280 ANLGWLRQGKELHAKVVGLG-ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSW 338
A L L GKE+H+ ++ + + V ++L+ Y + G A F + K+ +SW
Sbjct: 341 AQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISW 400
Query: 339 TAMLSAYCQN-KEYE---AVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVR 394
A+L A+ + K+++ + L+ E D ++L+ C V + KEVH V+
Sbjct: 401 NAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVK 460
Query: 395 KGGWRD---VIVESALVDLYAKCGCVDFAQRLFLSM-EVRNQITWNAMIGGLAQNGRGTE 450
G D + +AL+D YAKCG V++A ++FL + E R +++N+++ G +G +
Sbjct: 461 AGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDD 520
Query: 451 VLELFEDM 458
LF +M
Sbjct: 521 AQMLFTEM 528
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 136/557 (24%), Positives = 256/557 (45%), Gaps = 35/557 (6%)
Query: 66 LYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDS 125
++ +++ C S G LH K G + V S+L +Y K + Q +F
Sbjct: 23 VFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKC-RRMDDCQKMFRQ 81
Query: 126 LAVRDIIAWTSLISAYT-RAGRPINSLQLFSQMLDLD-MEPNAFTISSVITAASKLRDLA 183
+ D + W +++ + GR +++ F M D +P++ T + V+ +L D
Sbjct: 82 MDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSY 139
Query: 184 LGACLHAMVISRGFHSNTVISSALVDMYGRNRAV-RDALKLFDESPEPEDVVGWTAIIST 242
G +H+ +I G +T++ +ALV MY + + DA FD + +DVV W AII+
Sbjct: 140 NGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIAD-KDVVSWNAIIAG 198
Query: 243 LTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLG---WLRQGKELHAKVVGLG 299
+ N+M +A R F M + P+ T +L CA++ R G+++H+ VV
Sbjct: 199 FSENNMMADAFRSFCLMLKE-PTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRS 257
Query: 300 -ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFE-- 356
+ +V V +SL+ Y + G++ +A +F R+G K+ VSW +++ Y N E+ F+
Sbjct: 258 WLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLF 317
Query: 357 --LVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGW--RDVIVESALVDLY 411
LV + VS D ++L C+ + + GKE+H Y+ + + D V +AL+ Y
Sbjct: 318 HNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIH-SYILRHSYLLEDTSVGNALISFY 376
Query: 412 AKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFI 471
A+ G A F M ++ I+WNA++ A + + + L L ++ E + D +T +
Sbjct: 377 ARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTIL 436
Query: 472 GVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHY-------NCMIDLLGRAEMIEEAES 524
+L C + + + + V Y +K G+ H N ++D + +E A
Sbjct: 437 SLLKFCINVQGIGKVKE-----VHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHK 491
Query: 525 LLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGR 584
+ R + LL + A+ + +M + ++ L+ IY
Sbjct: 492 IFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLT---TWSLMVRIYAESCC 548
Query: 585 WNDAMEIRKLMEDRGVK 601
N+A+ + + ++ RG++
Sbjct: 549 PNEAIGVFREIQARGMR 565
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 144/328 (43%), Gaps = 15/328 (4%)
Query: 253 LRLFVAMHRG-CGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLL 311
LR FV R G D F ++ ACA++ L G+ LH V LG V S+L
Sbjct: 4 LRQFVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVL 63
Query: 312 DMYGKCGKVGQARVVFDRLGDKNSVSWTAM---LSAYC--QNKEYEAVFELVRERGVSDL 366
+MY KC ++ + +F ++ + V W + LS C + + E S +
Sbjct: 64 NMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSV 123
Query: 367 YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCV-DFAQRLFL 425
F VL C + GK +H ++ G +D +V +ALV +YAK G + A F
Sbjct: 124 -TFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFD 182
Query: 426 SMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG---L 482
+ ++ ++WNA+I G ++N + F M+KE EP+Y T VL C+
Sbjct: 183 GIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIA 242
Query: 483 VDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLL 542
GR+ + +V ++ V N ++ R IEEA SL + D W V++
Sbjct: 243 CRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSK-DLVSWNVVI 301
Query: 543 GACTKCSDYVTAERVARKMI---ELEPD 567
++ A ++ ++ ++ PD
Sbjct: 302 AGYASNCEWFKAFQLFHNLVHKGDVSPD 329
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 153/457 (33%), Positives = 233/457 (50%), Gaps = 43/457 (9%)
Query: 195 RGFH----SNTVI-SSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMF 249
R FH NT+ +S L+ + + +A +LFDE PEP D + ++S RN F
Sbjct: 82 RVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEP-DTFSYNIMLSCYVRNVNF 140
Query: 250 REALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKEL------------HAKVVG 297
+A F M D ++ T++ A G + + +EL +A + G
Sbjct: 141 EKAQSFFDRMP-----FKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISG 195
Query: 298 LGICGN---------------VVVESSLLDMYGKCGKVGQARVVF-DRLGDKNSVSWTAM 341
CG+ VV ++++ Y K KV A +F D +KN V+W AM
Sbjct: 196 YIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAM 255
Query: 342 LSAYCQNKEYEAVFELVR---ERGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGG 397
+S Y +N E +L R E G+ + + L CS ++A+ LG+++H +
Sbjct: 256 ISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTL 315
Query: 398 WRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFED 457
DV ++L+ +Y KCG + A +LF M+ ++ + WNAMI G AQ+G + L LF +
Sbjct: 316 CNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFRE 375
Query: 458 MIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAE 517
MI + PD+ITF+ VL AC+H GLV+ G YF MV +Y ++P +HY CM+DLLGRA
Sbjct: 376 MIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAG 435
Query: 518 MIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGN 577
+EEA L+ + R +++ LLGAC + AE A K+++L YV L N
Sbjct: 436 KLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLAN 495
Query: 578 IYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
IY + RW D +RK M++ V K+PG SWI N+
Sbjct: 496 IYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNK 532
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 196/427 (45%), Gaps = 42/427 (9%)
Query: 41 DGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGI-HSDR 99
DG+LR H + T + + SLL +K S + + AH L I D
Sbjct: 78 DGALR-VFHGMRAKNT--------ITWNSLLIGISKDPSRM----MEAHQLFDEIPEPDT 124
Query: 100 FVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLD 159
F N +L+ Y++ + +AQ+ FD + +D +W ++I+ Y R G + +LF M
Sbjct: 125 FSYNIMLSCYVR-NVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM-- 181
Query: 160 LDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRD 219
ME N + +++I+ + DL + + RG V +A++ Y + + V
Sbjct: 182 --MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAMITGYMKAKKVEL 235
Query: 220 ALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAAC 279
A +F + +++V W A+IS N + L+LF AM G+ P+ + L C
Sbjct: 236 AEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEE-GIRPNSSGLSSALLGC 294
Query: 280 ANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWT 339
+ L L+ G+++H V +C +V +SL+ MY KCG++G A +F+ + K+ V+W
Sbjct: 295 SELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWN 354
Query: 340 AMLSAYCQNKEYEAVFELVRE----RGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRK 395
AM+S Y Q+ + L RE + D F VL AC+ V +G V
Sbjct: 355 AMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMV-- 412
Query: 396 GGWRDVIVE------SALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGT 449
RD VE + +VDL + G ++ A +L SM R A+ G L R
Sbjct: 413 ---RDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHA---AVFGTLLGACRVH 466
Query: 450 EVLELFE 456
+ +EL E
Sbjct: 467 KNVELAE 473
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 238 bits (608), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 147/432 (34%), Positives = 236/432 (54%), Gaps = 18/432 (4%)
Query: 188 LHAMVISRGFHSNTVISSALVDM----YGRNRAVRDALKLFDESPEPEDVVGWTAIISTL 243
+H + +++ I S LV + ++ A L L P W +
Sbjct: 32 IHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPST---WNMLSRGY 88
Query: 244 TRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGN 303
+ +D E++ ++ M R G+ P+ TF LL ACA+ L G+++ +V+ G +
Sbjct: 89 SSSDSPVESIWVYSEMKRR-GIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFD 147
Query: 304 VVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFE----LVR 359
V V ++L+ +YG C K AR VFD + ++N VSW ++++A +N + VFE ++
Sbjct: 148 VYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIG 207
Query: 360 ERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDF 419
+R D +L AC G + LGK VH Q + + + + +ALVD+YAK G +++
Sbjct: 208 KRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEY 265
Query: 420 AQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEG-MEPDYITFIGVLFACS 478
A+ +F M +N TW+AMI GLAQ G E L+LF M+KE + P+Y+TF+GVL ACS
Sbjct: 266 ARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACS 325
Query: 479 HTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLW 538
HTGLVD+G +YF M + IKP + HY M+D+LGRA + EA ++ D +W
Sbjct: 326 HTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVW 385
Query: 539 AVLLGACT---KCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLM 595
LL AC+ D E+V +++IELEP + V++ N + W +A E+R++M
Sbjct: 386 RTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVM 445
Query: 596 EDRGVKKLPGKS 607
++ +KK+ G+S
Sbjct: 446 KETKMKKIAGES 457
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 182/421 (43%), Gaps = 54/421 (12%)
Query: 78 SSFLHGTTLHAHALKSGIHSDRFVGNSLLTLY-LKLGPHLPQAQTLFDSLAVRDIIAWTS 136
SS H +H S + +D F+ + L+ + L L L A+TL + W
Sbjct: 24 SSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNM 83
Query: 137 LISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRG 196
L Y+ + P+ S+ ++S+M ++PN T ++ A + L G + V+ G
Sbjct: 84 LSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHG 143
Query: 197 FHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLF 256
F + + + L+ +YG + DA K+FDE E +VV W +I++ L N F
Sbjct: 144 FDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTE-RNVVSWNSIMTALVENGKLNLVFECF 202
Query: 257 VAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGK 316
M G PD T LL+AC G L GK +H++V+ + N + ++L+DMY K
Sbjct: 203 CEM-IGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAK 259
Query: 317 CGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFEL----VRERGVSDLY-AFGT 371
G + AR+VF+R+ DKN +W+AM+ Q E +L ++E V Y F
Sbjct: 260 SGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLG 319
Query: 372 VLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRN 431
VL ACS G VD + F ME +
Sbjct: 320 VLCACSHT-----------------------------------GLVDDGYKYFHEMEKIH 344
Query: 432 QIT-----WNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACS-HTGLVDE 485
+I + AM+ L + GR E + + M EPD + + +L ACS H DE
Sbjct: 345 KIKPMMIHYGAMVDILGRAGRLNEAYDFIKKM---PFEPDAVVWRTLLSACSIHHDEDDE 401
Query: 486 G 486
G
Sbjct: 402 G 402
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 154/308 (50%), Gaps = 10/308 (3%)
Query: 58 LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLP 117
+ PN + + LL+ C G + LK G D +VGN+L+ LY
Sbjct: 109 IKPN--KLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLY-GTCKKTS 165
Query: 118 QAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAAS 177
A+ +FD + R++++W S+++A G+ + F +M+ P+ T+ +++A
Sbjct: 166 DARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG 225
Query: 178 KLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWT 237
+L+LG +H+ V+ R N + +ALVDMY ++ + A +F+ + ++V W+
Sbjct: 226 G--NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVD-KNVWTWS 282
Query: 238 AIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQG-KELHAKVV 296
A+I L + EAL+LF M + + P+ TF +L AC++ G + G K H
Sbjct: 283 AMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEK 342
Query: 297 GLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLG-DKNSVSWTAMLSAYC--QNKEYEA 353
I ++ +++D+ G+ G++ +A ++ + ++V W +LSA +++ E
Sbjct: 343 IHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEG 402
Query: 354 VFELVRER 361
+ E V++R
Sbjct: 403 IGEKVKKR 410
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 162/562 (28%), Positives = 268/562 (47%), Gaps = 54/562 (9%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
+ SL+ C T+S H +HA L+ G+ S R + L P + ++F +
Sbjct: 32 FISLIHACKDTASLRH---VHAQILRRGVLSSRVAAQLVSCSSLLKSPDY--SLSIFRNS 86
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
R+ +LI T R +S++ F ML L ++P+ T V+ + SKL LG
Sbjct: 87 EERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGR 146
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPE---PEDVVGWTAIISTL 243
LHA + ++ + +LVDMY + ++ A ++F+ESP+ E ++ W +I+
Sbjct: 147 ALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGY 206
Query: 244 TRNDMFREALRLFVAM-HRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICG 302
R A LF +M R G W
Sbjct: 207 CRAKDMHMATTLFRSMPERNSG------------------SW------------------ 230
Query: 303 NVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAV----FELV 358
S+L+ Y G++ +A+ +F+ + +KN VSWT +++ + Q +YE FE++
Sbjct: 231 -----STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEML 285
Query: 359 RERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
+ + Y VL ACS A+ G +H + G D + +ALVD+YAKCG +D
Sbjct: 286 EKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELD 345
Query: 419 FAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACS 478
A +F +M ++ ++W AMI G A +GR + ++ F M+ G +PD + F+ VL AC
Sbjct: 346 CAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACL 405
Query: 479 HTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLW 538
++ VD G +F M +Y I+P ++HY ++DLLGRA + EA L+EN D + W
Sbjct: 406 NSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTW 465
Query: 539 AVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDR 598
A L AC Y AE V++ ++EL+P+ SY+ L + + G D + R ++ R
Sbjct: 466 AALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKR 525
Query: 599 GVKKLPGKSWIGSENQKGSLSG 620
++ G S+I + Q S
Sbjct: 526 IKERSLGWSYIELDGQLNKFSA 547
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 170/392 (43%), Gaps = 60/392 (15%)
Query: 62 LKP--VLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQA 119
+KP + + +L++ +K G LHA LK+ + D FV SL+ +Y K G L A
Sbjct: 122 VKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTG-QLKHA 180
Query: 120 QTLF----DSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITA 175
+F D + I+ W LI+ Y RA
Sbjct: 181 FQVFEESPDRIKKESILIWNVLINGYCRA------------------------------- 209
Query: 176 ASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVG 235
+D+ + L + R S + + VD NRA +LF+ PE ++VV
Sbjct: 210 ----KDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAK----QLFELMPE-KNVVS 260
Query: 236 WTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV 295
WT +I+ ++ + A+ + M GL P+ +T +L+AC+ G L G +H +
Sbjct: 261 WTTLINGFSQTGDYETAISTYFEMLEK-GLKPNEYTIAAVLSACSKSGALGSGIRIHGYI 319
Query: 296 VGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVF 355
+ GI + + ++L+DMY KCG++ A VF + K+ +SWTAM+ + + +
Sbjct: 320 LDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAI 379
Query: 356 ELVRERGVS----DLYAFGTVLRACSGVAAVMLG----KEVHCQYVRKGGWRDVIVESAL 407
+ R+ S D F VL AC + V LG + Y + + ++ +
Sbjct: 380 QCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVL---V 436
Query: 408 VDLYAKCGCVDFAQRLFLSMEVRNQI-TWNAM 438
VDL + G ++ A L +M + + TW A+
Sbjct: 437 VDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 150/441 (34%), Positives = 228/441 (51%), Gaps = 46/441 (10%)
Query: 217 VRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLL 276
+R+A K+FDE PE DV+ TA+I + EA + F + G+ P+ FTFGT++
Sbjct: 43 IRNAHKVFDEIPEL-DVISATAVIGRFVKESRHVEASQAFKRL-LCLGIRPNEFTFGTVI 100
Query: 277 AACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSV 336
+ ++ GK+LH + +G+ NV V S++L+ Y K + AR FD D N V
Sbjct: 101 GSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVV 160
Query: 337 SWTAMLSAYCQNKEYEAVFELVR---ERGVSDLYA------------------------- 368
S T ++S Y + E+E L R ER V A
Sbjct: 161 SITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREG 220
Query: 369 --------FGTVLRACSGVAAVMLGKEVHCQYVRKGGWR-DVIVESALVDLYAKCGCVDF 419
F + A S +A+ GK +H ++ G R +V V ++L+ Y+KCG ++
Sbjct: 221 VVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMED 280
Query: 420 AQRLF--LSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKE-GMEPDYITFIGVLFA 476
+ F L E RN ++WN+MI G A NGRG E + +FE M+K+ + P+ +T +GVLFA
Sbjct: 281 SLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFA 340
Query: 477 CSHTGLVDEGRRYFALMVDEYGIKPGV---EHYNCMIDLLGRAEMIEEAESLLENADCRY 533
C+H GL+ EG YF V++Y P + EHY CM+D+L R+ +EAE L+++
Sbjct: 341 CNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDP 399
Query: 534 DHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRK 593
W LLG C S+ A+ A K++EL+P SYV+L N Y A+ W + IR+
Sbjct: 400 GIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRR 459
Query: 594 LMEDRGVKKLPGKSWIGSENQ 614
M++ G+K+ G SWI +Q
Sbjct: 460 KMKETGLKRFTGCSWIEVRDQ 480
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 184/387 (47%), Gaps = 51/387 (13%)
Query: 118 QAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAAS 177
A +FD + D+I+ T++I + + R + + Q F ++L L + PN FT +VI +++
Sbjct: 45 NAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSST 104
Query: 178 KLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPE------ 231
RD+ LG LH + G SN + SA+++ Y + + DA + FD++ +P
Sbjct: 105 TSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN 164
Query: 232 ------------------------DVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVP 267
VV W A+I ++ EA+ FV M R ++P
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 224
Query: 268 DGFTFGTLLAACANLGWLRQGKELHAKVVG-LGICGNVVVESSLLDMYGKCGKVGQARVV 326
+ TF + A +N+ GK +HA + LG NV V +SL+ Y KCG + + +
Sbjct: 225 NESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLA 284
Query: 327 FDRLGD--KNSVSWTAMLSAYCQN---KEYEAVFE-LVRERGV--SDLYAFGTVLRACSG 378
F++L + +N VSW +M+ Y N +E A+FE +V++ + +++ G VL AC+
Sbjct: 285 FNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILG-VLFACNH 343
Query: 379 VAAVMLGKEVHCQYVRKGGWRDVIV---ESALVDLYAKCGCVDFAQRLFLSMEVRNQI-T 434
+ G + V +++ + +VD+ ++ G A+ L SM + I
Sbjct: 344 AGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGF 403
Query: 435 WNAMIGG--LAQNGR-----GTEVLEL 454
W A++GG + N R +++LEL
Sbjct: 404 WKALLGGCQIHSNKRLAKLAASKILEL 430
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 137/318 (43%), Gaps = 38/318 (11%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGP------------ 114
+ +++ + T + G LH +ALK G+ S+ FVG+++L Y+KL
Sbjct: 96 FGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTR 155
Query: 115 ------------------HLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQ 156
+A +LF ++ R ++ W ++I +++ GR ++ F
Sbjct: 156 DPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVD 215
Query: 157 MLDLDME-PNAFTISSVITAASKLRDLALGACLHAMVIS-RGFHSNTVISSALVDMYGRN 214
ML + PN T ITA S + G +HA I G N + ++L+ Y +
Sbjct: 216 MLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKC 275
Query: 215 RAVRDALKLFDE-SPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFG 273
+ D+L F++ E ++V W ++I N EA+ +F M + L P+ T
Sbjct: 276 GNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTIL 335
Query: 274 TLLAACANLGWLRQGKELHAKVVGLGICGNVVV---ESSLLDMYGKCGKVGQARVVFDRL 330
+L AC + G +++G K V N++ + ++DM + G+ +A + +
Sbjct: 336 GVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSM 395
Query: 331 G-DKNSVSWTAMLSAYCQ 347
D W A+L CQ
Sbjct: 396 PLDPGIGFWKALLGG-CQ 412
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 172/580 (29%), Positives = 281/580 (48%), Gaps = 51/580 (8%)
Query: 70 LLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGP-HLPQAQTLFDSLAV 128
LL+ C + F + A ++ + D F + L+ P +L A+ LF +
Sbjct: 40 LLENCNSRNQF---KQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTP 96
Query: 129 R-DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGAC 187
++ + ++ISA + + L+S M+ + P+ T ++ A+S L ++ C
Sbjct: 97 NPNVFVYNTMISAVSSSKN--ECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQIHC 154
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRND 247
+++S + ++LV Y A K+F P P DV + +I +
Sbjct: 155 --HIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHP-DVSSFNVMIVGYAKQG 211
Query: 248 MFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG--ICGNVV 305
EAL+L+ M G+ PD +T +LL C +L +R GK +H + G N++
Sbjct: 212 FSLEALKLYFKMVSD-GIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLI 270
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEA---VFELVR--- 359
+ ++LLDMY KC + G A+ FD + K+ SW M+ + + + EA VF+ +
Sbjct: 271 LSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRD 330
Query: 360 -----------------ERGVSDLYAFGTVLRACSGVAAVML--------------GKEV 388
+R V +L+ T++ M+ G+ V
Sbjct: 331 LVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWV 390
Query: 389 HCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRG 448
H +R D + SAL+D+Y KCG ++ A +F + ++ W +MI GLA +G G
Sbjct: 391 HGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNG 450
Query: 449 TEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNC 508
+ L+LF M +EG+ P+ +T + VL ACSH+GLV+EG F M D++G P EHY
Sbjct: 451 QQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGS 510
Query: 509 MIDLLGRAEMIEEAESLLENA-DCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPD 567
++DLL RA +EEA+ +++ R S+W +L AC D TAE ++++LEP+
Sbjct: 511 LVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPE 570
Query: 568 FHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKS 607
YVLL NIY VGRW + + R+ ME+RGVKK G S
Sbjct: 571 KEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYS 610
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 134/314 (42%), Gaps = 56/314 (17%)
Query: 39 CKDGSLRQALHLLNTSQTTLDPNLKP--VLYASLLQTCTKTSSFLHGTTLHAHALKSGIH 96
C ++R+ + + T+ +KP V SL+ HG +H ++ +
Sbjct: 346 CDQRTVRELFY-----EMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLK 400
Query: 97 SDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQ 156
D F+ ++L+ +Y K G + +A +F + +D+ WTS+I+ G +LQLF +
Sbjct: 401 GDAFLSSALIDMYCKCGI-IERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGR 459
Query: 157 MLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRA 216
M + + PN T+ +V+T AC H+ ++ G H + + + D +G
Sbjct: 460 MQEEGVTPNNVTLLAVLT-----------ACSHSGLVEEGLH----VFNHMKDKFG---- 500
Query: 217 VRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLL 276
FD PE E + +++ L R EA + + + + P +G++L
Sbjct: 501 -------FD--PETEH---YGSLVDLLCRAGRVEEAKDI---VQKKMPMRPSQSMWGSIL 545
Query: 277 AACANLGWLRQGKELHAKVVGLGIC--------GNVVVESSLLDMYGKCGKVGQARVVFD 328
+AC R G+++ + L G V+ S++ G+ G + R +
Sbjct: 546 SAC------RGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAME 599
Query: 329 RLGDKNSVSWTAML 342
G K + +++++
Sbjct: 600 NRGVKKTAGYSSVV 613
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 151/493 (30%), Positives = 249/493 (50%), Gaps = 46/493 (9%)
Query: 161 DMEPNAFTISSVITAASKLR---DLALGACLHAMVISRGFH-SNTVISSALVDMYGRNRA 216
D + N +S T S LR ++A +HA +I R FH + + L+ + +
Sbjct: 18 DPDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKII-RTFHDQDAFVVFELIRVCSTLDS 76
Query: 217 VRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLL 276
V A +F P +V +TA+I + + + L+ M ++PD + ++L
Sbjct: 77 VDYAYDVFSYVSNP-NVYLYTAMIDGFVSSGRSADGVSLYHRMIHN-SVLPDNYVITSVL 134
Query: 277 AACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGD---- 332
AC L+ +E+HA+V+ LG + V ++++YGK G++ A+ +FD + D
Sbjct: 135 KACD----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHV 190
Query: 333 ---------------------------KNSVSWTAMLSAYCQNKEYEAVFELVRERGVSD 365
K++V WTAM+ +NKE EL RE + +
Sbjct: 191 AATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMEN 250
Query: 366 L----YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
+ + VL ACS + A+ LG+ VH + V +AL+++Y++CG ++ A+
Sbjct: 251 VSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEAR 310
Query: 422 RLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG 481
R+F M ++ I++N MI GLA +G E + F DM+ G P+ +T + +L ACSH G
Sbjct: 311 RVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGG 370
Query: 482 LVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVL 541
L+D G F M + ++P +EHY C++DLLGR +EEA +EN DH + L
Sbjct: 371 LLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTL 430
Query: 542 LGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
L AC + E++A+++ E E +YVLL N+Y + G+W ++ EIR+ M D G++
Sbjct: 431 LSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIE 490
Query: 602 KLPGKSWIGSENQ 614
K PG S I +NQ
Sbjct: 491 KEPGCSTIEVDNQ 503
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 205/441 (46%), Gaps = 50/441 (11%)
Query: 69 SLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAV 128
S+L++C + H ++HA +++ D FV L+ + L + A +F ++
Sbjct: 34 SVLRSCKNIA---HVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDS-VDYAYDVFSYVSN 89
Query: 129 RDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACL 188
++ +T++I + +GR + + L+ +M+ + P+ + I+SV+ A DL + +
Sbjct: 90 PNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREI 145
Query: 189 HAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPE----------------- 231
HA V+ GF S+ + ++++YG++ + +A K+FDE P+ +
Sbjct: 146 HAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFI 205
Query: 232 -------------DVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAA 278
D V WTA+I L RN +AL LF M + + FT +L+A
Sbjct: 206 KEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME-NVSANEFTAVCVLSA 264
Query: 279 CANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSW 338
C++LG L G+ +H+ V + + V ++L++MY +CG + +AR VF + DK+ +S+
Sbjct: 265 CSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISY 324
Query: 339 TAMLSAYCQN-KEYEAVFEL--VRERGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVR 394
M+S + EA+ E + RG + +L ACS + +G EV R
Sbjct: 325 NTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKR 384
Query: 395 KGGWRDVIVE-SALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLE 453
I +VDL + G ++ A R ++ + + M+G L + +E
Sbjct: 385 VFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPD---HIMLGTLLSACKIHGNME 441
Query: 454 LFEDMIK---EGMEPDYITFI 471
L E + K E PD T++
Sbjct: 442 LGEKIAKRLFESENPDSGTYV 462
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 143/470 (30%), Positives = 248/470 (52%), Gaps = 44/470 (9%)
Query: 185 GACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLT 244
G +HA +I GF + IS L+ ++ + + A ++FDE P+P + + +IS
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPT-LSAYNYMISGYL 111
Query: 245 RNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLG---WLRQG--KELHAKVVGLG 299
++ + +E L L V G DG+T +L A + G L + + +HA+++
Sbjct: 112 KHGLVKELL-LLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 300 ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFE 356
+ + V+ ++L+D Y K GK+ AR VF+ + D+N V T+M+S Y ++ E +F
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 357 LVRERGVS--------------------DLY-------------AFGTVLRACSGVAAVM 383
+ + + D+Y F +V+ ACS + +
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 384 LGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLA 443
+G++VH Q ++ G + + + S+L+D+YAKCG ++ A+R+F M+ +N +W +MI G
Sbjct: 291 VGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYG 350
Query: 444 QNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGV 503
+NG E LELF M + +EP+Y+TF+G L ACSH+GLVD+G F M +Y +KP +
Sbjct: 351 KNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKM 410
Query: 504 EHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIE 563
EHY C++DL+GRA + +A R D +WA LL +C + A A ++ +
Sbjct: 411 EHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFK 470
Query: 564 LEPDFHL-SYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSE 612
L D +Y+ L N+Y + +W++ +IR++M+ R + K G+SW +
Sbjct: 471 LNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTSED 520
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 200/429 (46%), Gaps = 45/429 (10%)
Query: 61 NLKPVLY-ASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQA 119
+L P Y A LQ + + G +HA +K+G D + LL L+LK G L A
Sbjct: 30 SLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGC-LSYA 88
Query: 120 QTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASK- 178
+ +FD L + A+ +IS Y + G L L +M + + +T+S V+ A++
Sbjct: 89 RQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSR 148
Query: 179 ----LRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFD--------- 225
+ +L +HA +I + V+ +ALVD Y ++ + A +F+
Sbjct: 149 GSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVC 208
Query: 226 ---------------------ESPEPEDVVGWTAIISTLTRN-DMFREALRLFVAMHRGC 263
+ + +D+V + A++ +R+ + + ++ ++++M R
Sbjct: 209 CTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRA- 267
Query: 264 GLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQA 323
G P+ TF +++ AC+ L G+++HA+++ G+ ++ + SSLLDMY KCG + A
Sbjct: 268 GFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDA 327
Query: 324 RVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFEL---VRERGVSDLY-AFGTVLRACSGV 379
R VFD++ +KN SWT+M+ Y +N E EL ++E + Y F L ACS
Sbjct: 328 RRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHS 387
Query: 380 AAVMLGKEVHCQYVRKGGWRDVIVESA-LVDLYAKCGCVDFAQRLFLSMEVR-NQITWNA 437
V G E+ R + + A +VDL + G ++ A +M R + W A
Sbjct: 388 GLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAA 447
Query: 438 MIGGLAQNG 446
++ +G
Sbjct: 448 LLSSCNLHG 456
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 151/306 (49%), Gaps = 16/306 (5%)
Query: 45 RQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNS 104
R L++ D L VL +L+ T K+ T+ ++ + S
Sbjct: 156 RSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTV----FETMKDENVVCCTS 211
Query: 105 LLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPIN-SLQLFSQMLDLDME 163
+++ Y+ G + A+ +F++ V+DI+ + +++ ++R+G S+ ++ M
Sbjct: 212 MISGYMNQG-FVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFH 270
Query: 164 PNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKL 223
PN T +SVI A S L +G +HA ++ G +++ + S+L+DMY + + DA ++
Sbjct: 271 PNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRV 330
Query: 224 FDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLG 283
FD+ E ++V WT++I +N EAL LF M + + P+ TF L+AC++ G
Sbjct: 331 FDQMQE-KNVFSWTSMIDGYGKNGNPEEALELFTRM-KEFRIEPNYVTFLGALSACSHSG 388
Query: 284 WLRQGKELHAKVV-GLGICGNVVVESSLLDMYGKCGKVGQ----ARVVFDRLGDKNSVSW 338
+ +G E+ + + + + ++D+ G+ G + + AR + +R +S W
Sbjct: 389 LVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPER---PDSDIW 445
Query: 339 TAMLSA 344
A+LS+
Sbjct: 446 AALLSS 451
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 154/394 (39%), Gaps = 86/394 (21%)
Query: 286 RQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAY 345
+ GK++HA ++ G ++ + LL ++ KCG + AR VFD L ++ M+S Y
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 346 CQNKEYEAVFELVRERGVS----DLYAFGTVLRACSGVAAVM-----LGKEVHCQYVRKG 396
++ + + LV+ S D Y VL+A + + M L + VH + ++
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 397 GWRDVIVESALVDLYAKCGCVDFAQRLFLSM----------------------------- 427
D ++ +ALVD Y K G ++ A+ +F +M
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 428 --EVRNQITWNAMIGGLAQNGR-GTEVLELFEDMIKEGMEPDYITFIGVLFACS------ 478
+V++ + +NAM+ G +++G ++++ M + G P+ TF V+ ACS
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 479 -----------------------------HTGLVDEGRRYFALMVDEYGIKPGVEHYNCM 509
G +++ RR F M ++ V + M
Sbjct: 291 VGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEK-----NVFSWTSM 345
Query: 510 IDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFH 569
ID G+ EEA L + LGA + CS ++ ++ D+
Sbjct: 346 IDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYS 405
Query: 570 LS-----YVLLGNIYRAVGRWNDAMEIRKLMEDR 598
+ Y + ++ G N A E + M +R
Sbjct: 406 MKPKMEHYACIVDLMGRAGDLNKAFEFARAMPER 439
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/417 (33%), Positives = 233/417 (55%), Gaps = 10/417 (2%)
Query: 66 LYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDS 125
++ LL C++ + F G +H + +K G+ + V +SL+ Y + G L A FD
Sbjct: 186 MFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCG-ELTSALRAFDM 243
Query: 126 LAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALG 185
+ +D+I+WT++ISA +R G I ++ +F ML+ PN FT+ S++ A S+ + L G
Sbjct: 244 MEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFG 303
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTR 245
+H++V+ R ++ + ++L+DMY + + D K+FD + V WT+II+ R
Sbjct: 304 RQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFD-GMSNRNTVTWTSIIAAHAR 362
Query: 246 NDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV 305
EA+ LF M R L+ + T ++L AC ++G L GKELHA+++ I NV
Sbjct: 363 EGFGEEAISLFRIMKRR-HLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVY 421
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEA-----VFELVRE 360
+ S+L+ +Y KCG+ A V +L ++ VSWTAM+S C + +E+ + E+++E
Sbjct: 422 IGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISG-CSSLGHESEALDFLKEMIQE 480
Query: 361 RGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFA 420
+ + + + L+AC+ ++++G+ +H + +V V SAL+ +YAKCG V A
Sbjct: 481 GVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEA 540
Query: 421 QRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFAC 477
R+F SM +N ++W AMI G A+NG E L+L M EG E D F +L C
Sbjct: 541 FRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 229/407 (56%), Gaps = 9/407 (2%)
Query: 86 LHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAG 145
+HA ALK + GN+L++ ++LG L A+ +FDS+ ++ + WT++I Y + G
Sbjct: 104 IHAMALKCFDDQVIYFGNNLISSCVRLGD-LVYARKVFDSMPEKNTVTWTAMIDGYLKYG 162
Query: 146 RPINSLQLFSQMLDLDME-PNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVIS 204
+ LF + + N ++ S+ + LG +H ++ G N ++
Sbjct: 163 LEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVE 221
Query: 205 SALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCG 264
S+LV Y + + AL+ FD E +DV+ WTA+IS +R +A+ +F+ M
Sbjct: 222 SSLVYFYAQCGELTSALRAFD-MMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNH-W 279
Query: 265 LVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQAR 324
+P+ FT ++L AC+ LR G+++H+ VV I +V V +SL+DMY KCG++ R
Sbjct: 280 FLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCR 339
Query: 325 VVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRERG-VSDLYAFGTVLRACSGVA 380
VFD + ++N+V+WT++++A+ + +E ++F +++ R +++ ++LRAC V
Sbjct: 340 KVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVG 399
Query: 381 AVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIG 440
A++LGKE+H Q ++ ++V + S LV LY KCG A + + R+ ++W AMI
Sbjct: 400 ALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMIS 459
Query: 441 GLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGR 487
G + G +E L+ ++MI+EG+EP+ T+ L AC+++ + GR
Sbjct: 460 GCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGR 506
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 75/134 (55%), Gaps = 4/134 (2%)
Query: 42 GSLRQALHLLNTS-QTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRF 100
G +AL L Q ++PN P Y+S L+ C + S L G ++H+ A K+ S+ F
Sbjct: 465 GHESEALDFLKEMIQEGVEPN--PFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVF 522
Query: 101 VGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDL 160
VG++L+ +Y K G + +A +FDS+ +++++W ++I Y R G +L+L +M
Sbjct: 523 VGSALIHMYAKCG-FVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAE 581
Query: 161 DMEPNAFTISSVIT 174
E + + +++++
Sbjct: 582 GFEVDDYIFATILS 595
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 172/557 (30%), Positives = 273/557 (49%), Gaps = 76/557 (13%)
Query: 133 AWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMV 192
+W++++ A R G I L+ ++++ +P+A + ++ + ++L LH V
Sbjct: 23 SWSTIVPALARFG-SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 193 ISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREA 252
GF SNT +S++L+ Y + ++ DA K+FDE P+P DV+ W +++S ++ F+E
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDP-DVISWNSLVSGYVQSGRFQEG 140
Query: 253 LRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAK-----------VVG---- 297
+ LF+ +HR + P+ F+F LAACA L G +H+K VVG
Sbjct: 141 ICLFLELHRS-DVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLI 199
Query: 298 --LGICG--------------------NVVVES--------------------------S 309
G CG N +V S
Sbjct: 200 DMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNE 259
Query: 310 LLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNK---EYEAVFELVRERGVS-D 365
L+D + K G A V + + NS SW +L+ Y ++ E F + GV D
Sbjct: 260 LIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFD 319
Query: 366 LYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFL 425
Y+ VL A + +A V G +H + G V+V SAL+D+Y+KCG + A+ +F
Sbjct: 320 EYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFW 379
Query: 426 SMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEG-MEPDYITFIGVLFACSHTGLVD 484
+M +N I WN MI G A+NG E ++LF + +E ++PD TF+ +L CSH +
Sbjct: 380 TMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPM 439
Query: 485 EGRR-YFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLG 543
E YF +M++EY IKP VEH +I +G+ + +A+ +++ YD W LLG
Sbjct: 440 EVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLG 499
Query: 544 ACTKCSDYVTAERVARKMIEL---EPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGV 600
AC+ D A+ VA KMIEL + D +L Y+++ N+Y RW + +IRK+M + GV
Sbjct: 500 ACSARKDLKAAKTVAAKMIELGDADKDEYL-YIVMSNLYAYHERWREVGQIRKIMRESGV 558
Query: 601 KKLPGKSWIGSENQKGS 617
K G SWI S + S
Sbjct: 559 LKEVGSSWIDSRTKCSS 575
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 153/513 (29%), Positives = 270/513 (52%), Gaps = 27/513 (5%)
Query: 103 NSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDM 162
N L++ Y+K + +A+ +F+ + R++++WT+++ Y + G + LF +M
Sbjct: 83 NGLVSGYIK-NRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM----- 136
Query: 163 EPNAFTISSVITAASKLRDLALGAC--LHAMVISRGFHSNTVISSALVDMYGRNRAVRDA 220
P +S + + D + L+ M+ + + V S+ ++ R V +A
Sbjct: 137 -PERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVDEA 191
Query: 221 LKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACA 280
+FDE E +VV WT +I+ +N+ A +LF M + G L+
Sbjct: 192 RLIFDEMRE-RNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLS--- 247
Query: 281 NLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTA 340
G + +E +V+ + V+ ++++ +G+ G++ +AR VFD + D+++ +W
Sbjct: 248 --GRIEDAEEFF-EVMPMK---PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRG 301
Query: 341 MLSAYCQNK-EYEAV--FELVRERGVSDLY-AFGTVLRACSGVAAVMLGKEVHCQYVRKG 396
M+ AY + E EA+ F ++++GV + + ++L C+ +A++ G++VH VR
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361
Query: 397 GWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFE 456
DV V S L+ +Y KCG + A+ +F ++ I WN++I G A +G G E L++F
Sbjct: 362 FDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFH 421
Query: 457 DMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRA 516
+M G P+ +T I +L ACS+ G ++EG F M ++ + P VEHY+C +D+LGRA
Sbjct: 422 EMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRA 481
Query: 517 EMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLG 576
+++A L+E+ + D ++W LLGAC S AE A+K+ E EPD +YVLL
Sbjct: 482 GQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLS 541
Query: 577 NIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
+I + +W D +RK M V K PG SWI
Sbjct: 542 SINASRSKWGDVAVVRKNMRTNNVSKFPGCSWI 574
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 170/384 (44%), Gaps = 63/384 (16%)
Query: 116 LPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITA 175
+ +A+ FDSL + I +W S++S Y G P + QLF +M +
Sbjct: 33 INEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSE---------------- 76
Query: 176 ASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVG 235
N V + LV Y +NR + +A +F+ PE +VV
Sbjct: 77 -----------------------RNVVSWNGLVSGYIKNRMIVEARNVFELMPE-RNVVS 112
Query: 236 WTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV 295
WTA++ + M EA LF M + ++ + + G + + ++L+
Sbjct: 113 WTAMVKGYMQEGMVGEAESLFWRMPE-----RNEVSWTVMFGGLIDDGRIDKARKLY--- 164
Query: 296 VGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEA-- 353
+ +VV ++++ + G+V +AR++FD + ++N V+WT M++ Y QN +
Sbjct: 165 -DMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVAR 223
Query: 354 -VFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHC--QYVRKGGWRDVIVESALVDL 410
+FE++ E+ T + S + L + ++ + VI +A++
Sbjct: 224 KLFEVMPEK---------TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVG 274
Query: 411 YAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITF 470
+ + G + A+R+F ME R+ TW MI + G E L+LF M K+G+ P + +
Sbjct: 275 FGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSL 334
Query: 471 IGVLFACSHTGLVDEGRRYFALMV 494
I +L C+ + GR+ A +V
Sbjct: 335 ISILSVCATLASLQYGRQVHAHLV 358
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 5/197 (2%)
Query: 46 QALHLLNTSQTT-LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNS 104
+AL L Q + P+ ++ S+L C +S +G +HAH ++ D +V +
Sbjct: 314 EALDLFAQMQKQGVRPSFPSLI--SILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASV 371
Query: 105 LLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEP 164
L+T+Y+K G L +A+ +FD + +DII W S+IS Y G +L++F +M P
Sbjct: 372 LMTMYVKCG-ELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMP 430
Query: 165 NAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVIS-SALVDMYGRNRAVRDALKL 223
N T+ +++TA S L G + + S+ + TV S VDM GR V A++L
Sbjct: 431 NKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMEL 490
Query: 224 FDESPEPEDVVGWTAII 240
+ D W A++
Sbjct: 491 IESMTIKPDATVWGALL 507
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 152/359 (42%), Gaps = 64/359 (17%)
Query: 191 MVISRGFHSNTVISSAL-VDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMF 249
+++ R + ++T ++ + + R + +A K FD S + + + W +I+S N +
Sbjct: 6 LILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFD-SLQFKAIGSWNSIVSGYFSNGLP 64
Query: 250 REALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESS 309
+EA +LF M NVV +
Sbjct: 65 KEARQLFDEMSER----------------------------------------NVVSWNG 84
Query: 310 LLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRERG-VSD 365
L+ Y K + +AR VF+ + ++N VSWTAM+ Y Q E E++F + ER VS
Sbjct: 85 LVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSW 144
Query: 366 LYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFL 425
FG ++ A L + +DV+ + ++ + G VD A+ +F
Sbjct: 145 TVMFGGLIDDGRIDKARKLYDMMPV--------KDVVASTNMIGGLCREGRVDEARLIFD 196
Query: 426 SMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDE 485
M RN +TW MI G QN R +LFE M E +++ +L + +G +++
Sbjct: 197 EMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYTLSGRIED 252
Query: 486 GRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGA 544
+F +M +KP V N MI G I +A + + + R D++ W ++ A
Sbjct: 253 AEEFFEVM----PMKP-VIACNAMIVGFGEVGEISKARRVFDLMEDR-DNATWRGMIKA 305
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 128/297 (43%), Gaps = 45/297 (15%)
Query: 316 KCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRER------GVSDL 366
+ GK+ +AR FD L K SW +++S Y N KE +F+ + ER G+
Sbjct: 29 RIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSG 88
Query: 367 YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLS 426
Y ++ V +M R+V+ +A+V Y + G V A+ LF
Sbjct: 89 YIKNRMIVEARNVFELMPE-------------RNVVSWTAMVKGYMQEGMVGEAESLFWR 135
Query: 427 MEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEG 486
M RN+++W M GGL +GR + +L++ M + D + ++ G VDE
Sbjct: 136 MPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVDEA 191
Query: 487 RRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACT 546
R F M + V + MI + ++ A L E + + S ++LLG
Sbjct: 192 RLIFDEMRER-----NVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLG--- 243
Query: 547 KCSDYVTAERVAR-----KMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDR 598
Y + R+ +++ ++P + +++G + VG + A + LMEDR
Sbjct: 244 ----YTLSGRIEDAEEFFEVMPMKPVIACNAMIVG--FGEVGEISKARRVFDLMEDR 294
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 21/193 (10%)
Query: 412 AKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFI 471
++ G ++ A++ F S++ + +WN+++ G NG E +LF++M E + +++
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM----SERNVVSWN 83
Query: 472 GVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADC 531
G++ ++ E R F LM + V + M+ + M+ EAESL
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPER-----NVVSWTAMVKGYMQEGMVGEAESLFWRMPE 138
Query: 532 RYDHSLWAVLLGACTKCSDYVTAERV--ARKMIELEP--DFHLSYVLLGNIYRAVGRWND 587
R + S W V+ G + R+ ARK+ ++ P D S ++G + R GR ++
Sbjct: 139 RNEVS-WTVMFGG------LIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCRE-GRVDE 190
Query: 588 AMEIRKLMEDRGV 600
A I M +R V
Sbjct: 191 ARLIFDEMRERNV 203
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/350 (36%), Positives = 194/350 (55%), Gaps = 4/350 (1%)
Query: 264 GLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQA 323
GL + T+ LL C +GK +HA++ +G N ++ LL +Y G + A
Sbjct: 103 GLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 324 RVVFDRLGDKNSVSWTAMLSAYCQNK-EYEAVF---ELVRERGVSDLYAFGTVLRACSGV 379
++F L ++ + W AM+S Y Q E E +F ++ + R V D Y F +V RACS +
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSAL 222
Query: 380 AAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMI 439
+ GK H +++ ++IV+SALVD+Y KC R+F + RN ITW ++I
Sbjct: 223 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLI 282
Query: 440 GGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGI 499
G +G+ +EVL+ FE M +EG P+ +TF+ VL AC+H GLVD+G +F M +YGI
Sbjct: 283 SGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGI 342
Query: 500 KPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVAR 559
+P +HY M+D LGRA ++EA + + C+ +W LLGAC + E A
Sbjct: 343 EPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAAT 402
Query: 560 KMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
K +EL+P +YV+ N Y + G A ++R+ ME+ GVKK PG S I
Sbjct: 403 KFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQI 452
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 150/308 (48%), Gaps = 9/308 (2%)
Query: 39 CKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSD 98
C G L++A+ LL +S ++P YA LLQ C + + G +HA G +
Sbjct: 87 CVTGRLKEAVGLLWSSGLQVEPET----YAVLLQECKQRKEYTKGKRIHAQMFVVGFALN 142
Query: 99 RFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQML 158
++ LL LY L L A LF SL +RD+I W ++IS Y + G L ++ M
Sbjct: 143 EYLKVKLLILY-ALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMR 201
Query: 159 DLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVR 218
+ P+ +T +SV A S L L G HA++I R SN ++ SALVDMY + +
Sbjct: 202 QNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFS 261
Query: 219 DALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAA 278
D ++FD+ +V+ WT++IS + E L+ F M G P+ TF +L A
Sbjct: 262 DGHRVFDQL-STRNVITWTSLISGYGYHGKVSEVLKCFEKMKEE-GCRPNPVTFLVVLTA 319
Query: 279 CANLGWLRQGKE-LHAKVVGLGICGNVVVESSLLDMYGKCGKVGQA-RVVFDRLGDKNSV 336
C + G + +G E ++ GI ++++D G+ G++ +A V ++
Sbjct: 320 CNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPP 379
Query: 337 SWTAMLSA 344
W ++L A
Sbjct: 380 VWGSLLGA 387
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 163/616 (26%), Positives = 284/616 (46%), Gaps = 85/616 (13%)
Query: 86 LHAHALKSG-IHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAV---RDIIAWTSLISAY 141
+HA L S I + +L+++Y +LG L A+ +F+++++ D+ W S++ A
Sbjct: 75 VHAQVLLSDFIFRSGSLAANLISVYARLGL-LLDARNVFETVSLVLLSDLRLWNSILKAN 133
Query: 142 TRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNT 201
G N+L+L+ M + + + + ++ A L L H VI G N
Sbjct: 134 VSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENL 193
Query: 202 VISSALVDMYGRNRAVRDALKLFDESP--------------------------------- 228
+ + L+ +Y + + DA LF E P
Sbjct: 194 HVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQRE 253
Query: 229 --EPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLR 286
+P++V WT+++S ++ F + L+ F M R G G + CA L L
Sbjct: 254 EFKPDEVT-WTSVLSCHSQCGKFEDVLKYFHLM-RMSGNAVSGEALAVFFSVCAELEALS 311
Query: 287 QGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYC 346
+++H V+ G + ++L+ +YGK GKV A +F ++ +K SW ++++++
Sbjct: 312 IAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFV 371
Query: 347 QNKEYEAVFELVRE----------------------------RGVSDLYAFGT------- 371
+ + L E RG L F
Sbjct: 372 DAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVL 431
Query: 372 --------VLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRL 423
+L C+ + A+ LG+E+H +R +++V++ALV++YAKCG + +
Sbjct: 432 ANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLV 491
Query: 424 FLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLV 483
F ++ ++ I+WN++I G +G + L +F+ MI G PD I + VL ACSH GLV
Sbjct: 492 FEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLV 551
Query: 484 DEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLG 543
++GR F M +G++P EHY C++DLLGR ++EA +++N + LL
Sbjct: 552 EKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLN 611
Query: 544 ACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKL 603
+C + AE +A ++ LEP+ SY+LL NIY A GRW ++ +R L + + +KK+
Sbjct: 612 SCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKV 671
Query: 604 PGKSWIGSENQKGSLS 619
G SWI + +K S
Sbjct: 672 SGSSWIEVKKKKYKFS 687
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 171/392 (43%), Gaps = 64/392 (16%)
Query: 164 PNAFTISSVITAASK-------LRDLALGACL--------HAMVISRGF-HSNTVISSAL 207
P+ ++SS + S D LG CL HA V+ F + +++ L
Sbjct: 36 PDTVSVSSYYSLTSNNDQSLFHYFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANL 95
Query: 208 VDMYGRNRAVRDALKLFDESPEP--EDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGL 265
+ +Y R + DA +F+ D+ W +I+ + ++ AL L+ M R GL
Sbjct: 96 ISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGM-RQRGL 154
Query: 266 VPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARV 325
DG+ +L AC LG + H +V+ +G+ N+ V + LL +Y K G++G A
Sbjct: 155 TGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYN 214
Query: 326 VFDRLGDKNSVSWTAMLSAYCQNKEYEA---VFE-LVRERGVSDLYAFGTVL-------- 373
+F + +N +SW M+ + Q + E+ +FE + RE D + +VL
Sbjct: 215 LFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGK 274
Query: 374 ---------------------------RACSGVAAVMLGKEVHCQYVRKGGWRDVI-VES 405
C+ + A+ + ++VH YV KGG+ + + +
Sbjct: 275 FEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVH-GYVIKGGFEEYLPSRN 333
Query: 406 ALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKE---- 461
AL+ +Y K G V A+ LF + + +WN++I G+ E L LF ++ +
Sbjct: 334 ALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVC 393
Query: 462 GMEPDYITFIGVLFACSHTGLVDEGRRYFALM 493
++ + +T+ V+ C+ G D+ YF M
Sbjct: 394 NVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 138/297 (46%), Gaps = 45/297 (15%)
Query: 272 FGTLLAACANLGWLRQGKELHAKVV-GLGICGNVVVESSLLDMYGKCGKVGQARVVFDRL 330
F LL C +Q +++HA+V+ I + + ++L+ +Y + G + AR VF+ +
Sbjct: 59 FDHLLGLCLTA---QQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETV 115
Query: 331 GD---KNSVSWTAMLSAYCQNKEYEAVFEL---VRERGVS-DLYAFGTVLRACSGVAAVM 383
+ W ++L A + YE EL +R+RG++ D Y +LRAC +
Sbjct: 116 SLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFG 175
Query: 384 LGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLA 443
L + H Q ++ G ++ V + L+ LY K G + A LF+ M VRN+++WN MI G +
Sbjct: 176 LCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFS 235
Query: 444 QNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALM---------- 493
Q +++FE M +E +PD +T+ VL S G ++ +YF LM
Sbjct: 236 QEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGE 295
Query: 494 --------------------VDEYGIKPGVEHY----NCMIDLLGRAEMIEEAESLL 526
V Y IK G E Y N +I + G+ +++AE L
Sbjct: 296 ALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLF 352
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 81/167 (48%), Gaps = 3/167 (1%)
Query: 70 LLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVR 129
+L C + + G +H H +++ + + V N+L+ +Y K G L + +F+++ +
Sbjct: 440 ILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGL-LSEGSLVFEAIRDK 498
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALG-ACL 188
D+I+W S+I Y G +L +F +M+ P+ + +V++A S + G
Sbjct: 499 DLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIF 558
Query: 189 HAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESP-EPEDVV 234
++M G + +VD+ GR +++A ++ P EP+ V
Sbjct: 559 YSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCV 605
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 229 bits (583), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 152/499 (30%), Positives = 245/499 (49%), Gaps = 59/499 (11%)
Query: 160 LDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNT---------VISSALVDM 210
+E N + S + SK +L +HA ++ G ++ ISS D
Sbjct: 8 FSLEHNLYETMSCLQRCSKQEELKQ---IHARMLKTGLMQDSYAITKFLSFCISSTSSDF 64
Query: 211 YGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVP-DG 269
+ V D FD D W +I + +D +L L+ M C P +
Sbjct: 65 LPYAQIVFDG---FDRP----DTFLWNLMIRGFSCSDEPERSLLLYQRML--CSSAPHNA 115
Query: 270 FTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDR 329
+TF +LL AC+NL + ++HA++ LG +V +SL++ Y G A ++FDR
Sbjct: 116 YTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDR 175
Query: 330 -------------------------------LGDKNSVSWTAMLSAYCQ---NKEYEAVF 355
+ +KN++SWT M+S Y Q NKE +F
Sbjct: 176 IPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLF 235
Query: 356 ELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR-DVIVESALVDLYAK 413
++ V D + L AC+ + A+ GK +H Y+ K R D ++ L+D+YAK
Sbjct: 236 HEMQNSDVEPDNVSLANALSACAQLGALEQGKWIH-SYLNKTRIRMDSVLGCVLIDMYAK 294
Query: 414 CGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGV 473
CG ++ A +F +++ ++ W A+I G A +G G E + F +M K G++P+ ITF V
Sbjct: 295 CGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAV 354
Query: 474 LFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRY 533
L ACS+TGLV+EG+ F M +Y +KP +EHY C++DLLGRA +++EA+ ++ +
Sbjct: 355 LTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKP 414
Query: 534 DHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRK 593
+ +W LL AC + E + +I ++P YV NI+ +W+ A E R+
Sbjct: 415 NAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRR 474
Query: 594 LMEDRGVKKLPGKSWIGSE 612
LM+++GV K+PG S I E
Sbjct: 475 LMKEQGVAKVPGCSTISLE 493
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 192/421 (45%), Gaps = 44/421 (10%)
Query: 57 TLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKL--GP 114
+L+ NL + S LQ C+K +HA LK+G+ D + L+ +
Sbjct: 9 SLEHNLYETM--SCLQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTSSD 63
Query: 115 HLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVIT 174
LP AQ +FD D W +I ++ + P SL L+ +ML NA+T S++
Sbjct: 64 FLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLK 123
Query: 175 AASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDV- 233
A S L +HA + G+ ++ ++L++ Y + A LFD PEP+DV
Sbjct: 124 ACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVS 183
Query: 234 -----------------------------VGWTAIISTLTRNDMFREALRLFVAMHRGCG 264
+ WT +IS + DM +EAL+LF M +
Sbjct: 184 WNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEM-QNSD 242
Query: 265 LVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQAR 324
+ PD + L+ACA LG L QGK +H+ + I + V+ L+DMY KCG++ +A
Sbjct: 243 VEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEAL 302
Query: 325 VVFDRLGDKNSVSWTAMLSAYC---QNKEYEAVFELVRERGVS-DLYAFGTVLRACSGVA 380
VF + K+ +WTA++S Y +E + F +++ G+ ++ F VL ACS
Sbjct: 303 EVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTG 362
Query: 381 AVMLGKEVHCQYVRKGGWRDVIVE-SALVDLYAKCGCVDFAQRLFLSMEVR-NQITWNAM 438
V GK + R + I +VDL + G +D A+R M ++ N + W A+
Sbjct: 363 LVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGAL 422
Query: 439 I 439
+
Sbjct: 423 L 423
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 156/310 (50%), Gaps = 34/310 (10%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLG----PHL-----P 117
+ SLL+ C+ S+F T +HA K G +D + NSL+ Y G HL P
Sbjct: 118 FPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP 177
Query: 118 Q---------------------AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQ 156
+ A TLF +A ++ I+WT++IS Y +A +LQLF +
Sbjct: 178 EPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHE 237
Query: 157 MLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRA 216
M + D+EP+ ++++ ++A ++L L G +H+ + ++V+ L+DMY +
Sbjct: 238 MQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGE 297
Query: 217 VRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLL 276
+ +AL++F ++ + + V WTA+IS + REA+ F+ M + G+ P+ TF +L
Sbjct: 298 MEEALEVF-KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQK-MGIKPNVITFTAVL 355
Query: 277 AACANLGWLRQGKEL-HAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK-N 334
AC+ G + +GK + ++ + + ++D+ G+ G + +A+ + K N
Sbjct: 356 TACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPN 415
Query: 335 SVSWTAMLSA 344
+V W A+L A
Sbjct: 416 AVIWGALLKA 425
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 229 bits (583), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 132/422 (31%), Positives = 218/422 (51%), Gaps = 46/422 (10%)
Query: 236 WTAIISTLTRN---DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELH 292
W II + N + +++ M R + PD TF LL + N L G+ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRM-RNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 293 AKVVGLGICGNVVVESSLLDMYGKCGK-------------------------------VG 321
A+++ G+ + V +SLL+MY CG +
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLID 145
Query: 322 QARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVS---------DLYAFGTV 372
AR +FD + ++N +SW+ +++ Y +Y+ +L RE + + + TV
Sbjct: 146 DARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 373 LRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQ 432
L AC + A+ GK VH + D+++ +AL+D+YAKCG ++ A+R+F ++ +
Sbjct: 206 LSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
Query: 433 I-TWNAMIGGLAQNGRGTEVLELFEDMI-KEGMEPDYITFIGVLFACSHTGLVDEGRRYF 490
+ ++AMI LA G E +LF +M + + P+ +TF+G+L AC H GL++EG+ YF
Sbjct: 266 VKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYF 325
Query: 491 ALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSD 550
+M++E+GI P ++HY CM+DL GR+ +I+EAES + + D +W LL D
Sbjct: 326 KMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGD 385
Query: 551 YVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIG 610
T E +++IEL+P +YVLL N+Y GRW + IR ME +G+ K+PG S++
Sbjct: 386 IKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVE 445
Query: 611 SE 612
E
Sbjct: 446 VE 447
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 139/300 (46%), Gaps = 39/300 (13%)
Query: 83 GTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYT 142
G HA L G+ D FV SLL +Y G L AQ +FD +D+ AW S+++AY
Sbjct: 81 GQRTHAQILLFGLDKDPFVRTSLLNMYSSCG-DLRSAQRVFDDSGSKDLPAWNSVVNAYA 139
Query: 143 RAGRPINSLQLFSQM------------------------LDLDME------------PNA 166
+AG ++ +LF +M LDL E PN
Sbjct: 140 KAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNE 199
Query: 167 FTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDE 226
FT+S+V++A +L L G +HA + + V+ +AL+DMY + ++ A ++F+
Sbjct: 200 FTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNA 259
Query: 227 SPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLR 286
+DV ++A+I L + E +LF M + P+ TF +L AC + G +
Sbjct: 260 LGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLIN 319
Query: 287 QGKELHAKVV-GLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLG-DKNSVSWTAMLSA 344
+GK ++ GI ++ ++D+YG+ G + +A + + + + W ++LS
Sbjct: 320 EGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 32/219 (14%)
Query: 42 GSLRQALHLLNTSQTTLDPN---LKPVLY--ASLLQTCTKTSSFLHGTTLHAHALKSGIH 96
G ++AL L Q PN ++P + +++L C + + G +HA+ K +
Sbjct: 173 GKYKEALDLFREMQLP-KPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVE 231
Query: 97 SDRFVGNSLLTLYLKLGPHLPQAQTLFDSL-AVRDIIAWTSLISAYTRAGRPINSLQLFS 155
D +G +L+ +Y K G L +A+ +F++L + +D+ A++++I G QLFS
Sbjct: 232 IDIVLGTALIDMYAKCGS-LERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFS 290
Query: 156 QMLDLD-MEPNAFTISSVITAASKLRDLALGACLHAMVISRG----------FHSNTVIS 204
+M D + PN+ T + LGAC+H +I+ G F I
Sbjct: 291 EMTTSDNINPNSVTFVGI-----------LGACVHRGLINEGKSYFKMMIEEFGITPSIQ 339
Query: 205 --SALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIS 241
+VD+YGR+ +++A P DV+ W +++S
Sbjct: 340 HYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLS 378
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 157/534 (29%), Positives = 273/534 (51%), Gaps = 34/534 (6%)
Query: 98 DRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQM 157
D F N++++ Y K + +A LF+ + R+ ++W+++I+ + + G +++ LF +M
Sbjct: 135 DSFSWNTMISGYAK-NRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM 193
Query: 158 LDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAV 217
D P ++ +I +L + A + ++S G + L+ YG+ V
Sbjct: 194 PVKDSSPLCALVAGLIKN-ERLSEAAWVLGQYGSLVS-GREDLVYAYNTLIVGYGQRGQV 251
Query: 218 RDALKLFDESPEP--------------EDVVGWTAIISTLTRNDMFREALRLFVAMHRGC 263
A LFD+ P+ ++VV W ++I + A LF M
Sbjct: 252 EAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKD-- 309
Query: 264 GLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGI-CGNVVVESSLLDMYGKCGKVGQ 322
D ++ T++ ++ + L +++ N++V Y G V
Sbjct: 310 ---RDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSG-----YASVGNVEL 361
Query: 323 ARVVFDRLGDKNSVSWTAMLSAYCQNKEY-EAVFELVR---ERGVSDLYAFGTVLRACSG 378
AR F++ +K++VSW ++++AY +NK+Y EAV +R E D + ++L A +G
Sbjct: 362 ARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTG 421
Query: 379 VAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQ-ITWNA 437
+ + LG ++H Q V K DV V +AL+ +Y++CG + ++R+F M+++ + ITWNA
Sbjct: 422 LVNLRLGMQMH-QIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNA 480
Query: 438 MIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEY 497
MIGG A +G +E L LF M G+ P +ITF+ VL AC+H GLVDE + F M+ Y
Sbjct: 481 MIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVY 540
Query: 498 GIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERV 557
I+P +EHY+ ++++ EEA ++ + D ++W LL AC ++ A
Sbjct: 541 KIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVA 600
Query: 558 ARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGS 611
A M LEP+ YVLL N+Y +G W++A ++R ME + +KK G SW+ S
Sbjct: 601 AEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVDS 654
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 199/457 (43%), Gaps = 64/457 (14%)
Query: 103 NSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDM 162
N++++ Y+K + QA+ LFD + RD++ W ++IS Y G I L+ ++ D
Sbjct: 75 NTMISGYVKR-REMNQARKLFDVMPKRDVVTWNTMISGYVSCG-GIRFLEEARKLFDEMP 132
Query: 163 EPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALK 222
++F+ +++I+ +K R + L + R N V SA++ + +N V A+
Sbjct: 133 SRDSFSWNTMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVV 188
Query: 223 LFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRG---CGLVPDGFTFGTLLAAC 279
LF + P +D A+++ L +N+ EA +V G G + + TL+
Sbjct: 189 LFRKMP-VKDSSPLCALVAGLIKNERLSEA--AWVLGQYGSLVSGREDLVYAYNTLIVGY 245
Query: 280 ANLGWLRQGKELHAKVVGL-----------GICGNVVVESSLLDMYGKCGKVGQARVVFD 328
G + + L ++ L C NVV +S++ Y K G V AR++FD
Sbjct: 246 GQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFD 305
Query: 329 RLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEV 388
++ D++++SW M+ Y E F L E M ++
Sbjct: 306 QMKDRDTISWNTMIDGYVHVSRMEDAFALFSE----------------------MPNRDA 343
Query: 389 HCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRG 448
H W + +V YA G V+ A+ F ++ ++WN++I +N
Sbjct: 344 H-------SW------NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDY 390
Query: 449 TEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVD--EGRRYFALMVDEYGIKPGVEHY 506
E ++LF M EG +PD T +L A TGLV+ G + ++V + P V +
Sbjct: 391 KEAVDLFIRMNIEGEKPDPHTLTSLLSAS--TGLVNLRLGMQMHQIVVKT--VIPDVPVH 446
Query: 507 NCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLG 543
N +I + R I E+ + + + + W ++G
Sbjct: 447 NALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIG 483
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 133/311 (42%), Gaps = 39/311 (12%)
Query: 311 LDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLYAFG 370
L+ + G + +AR +F++L +N+V+W M+S Y + +E +L D+ +
Sbjct: 47 LNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWN 106
Query: 371 TVLR---ACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSM 427
T++ +C G+ + +++ + RD + ++ YAK + A LF M
Sbjct: 107 TMISGYVSCGGIRFLEEARKLFDEMPS----RDSFSWNTMISGYAKNRRIGEALLLFEKM 162
Query: 428 EVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGR 487
RN ++W+AMI G QNG + LF M + P + L A GL+ R
Sbjct: 163 PERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP-----LCALVA----GLIKNER 213
Query: 488 -RYFALMVDEYG-IKPGVEH----YNCMIDLLGRAEMIEEAESLLENAD--CRYDHS--- 536
A ++ +YG + G E YN +I G+ +E A L + C DH
Sbjct: 214 LSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEF 273
Query: 537 ---------LWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWND 587
W ++ A K D V+A + +M + + +S+ + + Y V R D
Sbjct: 274 RERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDT---ISWNTMIDGYVHVSRMED 330
Query: 588 AMEIRKLMEDR 598
A + M +R
Sbjct: 331 AFALFSEMPNR 341
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 225 bits (574), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 155/595 (26%), Positives = 288/595 (48%), Gaps = 46/595 (7%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLK-LGPHLPQAQTLFDS 125
+ ++L C + S F G +H +KSG + FV NSL++LY K G LFD
Sbjct: 184 FVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDE 243
Query: 126 LAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLD-MEPNAFTISSVITAASKLRDLAL 184
+ RD+ +W +++S+ + G+ + LF +M ++ ++FT+S+++++ + L
Sbjct: 244 IPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLR 303
Query: 185 GACLHAMVISRGFHSNTVISSALVDMYGRN------------------------------ 214
G LH I G +++AL+ Y +
Sbjct: 304 GRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMS 363
Query: 215 -RAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAM-HRGCGLVPDGFTF 272
V A+++F E ++ + + A+++ RN +AL+LF M RG L F+
Sbjct: 364 FGMVDSAVEIFANVTE-KNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELT--DFSL 420
Query: 273 GTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGD 332
+ + AC + + +++H + G N ++++LLDM +C ++ A +FD+
Sbjct: 421 TSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPS 480
Query: 333 K--NSVSWTAMLSAYCQN---KEYEAVFE--LVRERGVSDLYAFGTVLRACSGVAAVMLG 385
+S + T+++ Y +N + ++F L ++ D + +L C + +G
Sbjct: 481 NLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMG 540
Query: 386 KEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQN 445
++HC ++ G + D+ + ++L+ +YAKC D A ++F +M + I+WN++I
Sbjct: 541 YQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQ 600
Query: 446 GRGTEVLELFEDMIKEGMEPDYITFIGVL--FACSHTGLVDEGRRYFALMVDEYGIKPGV 503
G E L L+ M ++ ++PD IT V+ F + + + R F M Y I+P
Sbjct: 601 RNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTT 660
Query: 504 EHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIE 563
EHY + +LG ++EEAE + + + + S+ LL +C S+ A+RVA+ ++
Sbjct: 661 EHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILS 720
Query: 564 LEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQKGSL 618
+P+ Y+L NIY A G W+ + IR+ M +RG +K P KSWI EN+ S
Sbjct: 721 TKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSF 775
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 233/459 (50%), Gaps = 51/459 (11%)
Query: 86 LHAHALKSGIHSDRFVGNSLLTLYLKLGPHLP-QAQTLFDSLAVRDIIAWTSLISAYTRA 144
+HA LK R +GN+L++ YLKLG P +A +F SL+ ++++T+LIS ++R
Sbjct: 102 VHASFLKLREEKTR-LGNALISTYLKLG--FPREAILVFVSLSSPTVVSYTALISGFSRL 158
Query: 145 GRPINSLQLFSQMLDLDM-EPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVI 203
I +L++F +M + +PN +T +++TA ++ +LG +H +++ GF ++ +
Sbjct: 159 NLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFV 218
Query: 204 SSALVDMYGRN--RAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHR 261
S++L+ +Y ++ + D LKLFDE P+ DV W ++S+L + +A LF M+R
Sbjct: 219 SNSLMSLYDKDSGSSCDDVLKLFDEIPQ-RDVASWNTVVSSLVKEGKSHKAFDLFYEMNR 277
Query: 262 GCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGK----- 316
G D FT TLL++C + L +G+ELH + + +G+ + V ++L+ Y K
Sbjct: 278 VEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMK 337
Query: 317 --------------------------CGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNK- 349
G V A +F + +KN++++ A+++ +C+N
Sbjct: 338 KVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGH 397
Query: 350 --EYEAVFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESA 406
+ +F + +RGV ++ + + AC V+ + +++H ++ G + +++A
Sbjct: 398 GLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTA 457
Query: 407 LVDLYAKCGCVDFAQRLF--LSMEVRNQITWNAMIGGLAQNGRGTEVLELFE-DMIKEGM 463
L+D+ +C + A+ +F + + ++IGG A+NG + + LF + ++ +
Sbjct: 458 LLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKL 517
Query: 464 EPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPG 502
D ++ +L C G + G + + Y +K G
Sbjct: 518 FLDEVSLTLILAVCGTLGFREMGYQ-----IHCYALKAG 551
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 196/409 (47%), Gaps = 64/409 (15%)
Query: 182 LALGACLHAMVISRGFHSN--------TVISSALVDMYGRNRAVRDALKLFDESPEPEDV 233
L L A H + +++ H++ T + +AL+ Y + R+A+ +F P V
Sbjct: 87 LRLSAQYHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSP-TV 145
Query: 234 VGWTAIISTLTRNDMFREALRLFVAMHRGCGLV-PDGFTFGTLLAACANLGWLRQGKELH 292
V +TA+IS +R ++ EAL++F M R GLV P+ +TF +L AC + G ++H
Sbjct: 146 VSYTALISGFSRLNLEIEALKVFFRM-RKAGLVQPNEYTFVAILTACVRVSRFSLGIQIH 204
Query: 293 AKVVGLGICGNVVVESSLLDMYGK-----CGKVGQARVVFDRLGDKNSVSWTAMLSAYCQ 347
+V G +V V +SL+ +Y K C V + +FD + ++ SW ++S+ +
Sbjct: 205 GLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLK---LFDEIPQRDVASWNTVVSSLVK 261
Query: 348 ----NKEYEAVFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVI 402
+K ++ +E+ R G D + T+L +C+ + ++ G+E+H + +R G +++
Sbjct: 262 EGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELS 321
Query: 403 VESALVDLYAK-------------------------------CGCVDFAQRLFLSMEVRN 431
V +AL+ Y+K G VD A +F ++ +N
Sbjct: 322 VNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKN 381
Query: 432 QITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFA 491
IT+NA++ G +NG G + L+LF DM++ G+E + + AC GLV E + +
Sbjct: 382 TITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC---GLVSEKK--VS 436
Query: 492 LMVDEYGIKPGVEHYNC----MIDLLGRAEMIEEAESLLENADCRYDHS 536
+ + IK G C ++D+ R E + +AE + + D S
Sbjct: 437 EQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSS 485
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
Query: 28 ASSTDSEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLH 87
+ +T S I + ++G +A+ L + + L V +L C G +H
Sbjct: 485 SKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIH 544
Query: 88 AHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRP 147
+ALK+G SD +GNSL+++Y K A +F+++ D+I+W SLIS Y
Sbjct: 545 CYALKAGYFSDISLGNSLISMYAKCCDS-DDAIKIFNTMREHDVISWNSLISCYILQRNG 603
Query: 148 INSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGAC 187
+L L+S+M + +++P+ T++ VI+A L +C
Sbjct: 604 DEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSC 643
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 161/560 (28%), Positives = 282/560 (50%), Gaps = 21/560 (3%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLY--LKLGPHLPQAQTLFD 124
+ S+L C+ G +H + G + FV ++L+ LY L+L + A LFD
Sbjct: 115 FPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRL---VDVALKLFD 171
Query: 125 SLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDME---PNAFTISSVITAASKLRD 181
+ R++ L+ + + G S +LF L +++E N T +I S R
Sbjct: 172 EMLDRNLAVCNLLLRCFCQTGE---SKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRL 228
Query: 182 LALGACLHAMVISRGFH-SNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAII 240
+ G LH++V+ G++ SN +++ LVD Y + +++ F+ PE +DV+ W +I+
Sbjct: 229 VYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPE-KDVISWNSIV 287
Query: 241 STLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGI 300
S ++L LF M G P F + L C+ ++ GK++H V+ +G
Sbjct: 288 SVCADYGSVLDSLDLFSKMQFW-GKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGF 346
Query: 301 -CGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSA--YCQ-NKEYEAVFE 356
++ V+S+L+DMYGKC + + +++ L N +++++ +C K+ +F
Sbjct: 347 DVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFG 406
Query: 357 LVRERGVS-DLYAFGTVLRACSGVAAVMLGK--EVHCQYVRKGGWRDVIVESALVDLYAK 413
L+ + G D TVL+A S L VHC ++ G DV V +L+D Y K
Sbjct: 407 LMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTK 466
Query: 414 CGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGV 473
G + ++++F ++ N ++I G A+NG GT+ +++ +M + + PD +T + V
Sbjct: 467 SGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSV 526
Query: 474 LFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRY 533
L CSH+GLV+EG F + +YGI PG + Y CM+DLLGRA ++E+AE LL A
Sbjct: 527 LSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDA 586
Query: 534 DHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRK 593
D W+ LL +C + R A ++ LEP+ Y+ + Y +G + + +IR+
Sbjct: 587 DCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIRE 646
Query: 594 LMEDRGVKKLPGKSWIGSEN 613
+ R + + G S + +N
Sbjct: 647 IAASRELMREIGYSSVVVKN 666
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 186/371 (50%), Gaps = 10/371 (2%)
Query: 115 HLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVIT 174
+L A FD ++VRD++ + LIS +R G + +++L+++M+ + +A T SV++
Sbjct: 61 NLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLS 120
Query: 175 AASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVV 234
S G +H VIS GF N + SALV +Y R V ALKLFDE + ++
Sbjct: 121 VCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLD-RNLA 179
Query: 235 GWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAK 294
++ + + +++ M G+ +G T+ ++ C++ + +GK+LH+
Sbjct: 180 VCNLLLRCFCQTGESKRLFEVYLRMELE-GVAKNGLTYCYMIRGCSHDRLVYEGKQLHSL 238
Query: 295 VVGLG-ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEA 353
VV G N+ V + L+D Y CG + + F+ + +K+ +SW +++S
Sbjct: 239 VVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLD 298
Query: 354 VFELVRERGV----SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGW--RDVIVESAL 407
+L + + F + L CS + + GK++HC YV K G+ + V+SAL
Sbjct: 299 SLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHC-YVLKMGFDVSSLHVQSAL 357
Query: 408 VDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDY 467
+D+Y KC ++ + L+ S+ N N+++ L G +++E+F MI EG D
Sbjct: 358 IDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDE 417
Query: 468 ITFIGVLFACS 478
+T VL A S
Sbjct: 418 VTLSTVLKALS 428
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/542 (28%), Positives = 272/542 (50%), Gaps = 14/542 (2%)
Query: 55 QTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGP 114
++ L P + ++ + L++C T + + +H + +K+G+ D F + LL L
Sbjct: 21 ESLLSPQCQKLI--NDLRSCRDT---VEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVL-- 73
Query: 115 HLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVIT 174
+ A ++F+ ++ ++ + ++I Y+ + P + +F+Q+ + + F+ + +
Sbjct: 74 DIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLK 133
Query: 175 AASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVV 234
+ S+ +++G LH + + GF T + +AL+ Y + DA K+FDE P+ D V
Sbjct: 134 SCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAV 193
Query: 235 GWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAK 294
++ +++ + AL LF M R +V + T + L+A ++LG L + H
Sbjct: 194 TFSTLMNGYLQVSKKALALDLFRIM-RKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVL 252
Query: 295 VVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAV 354
+ +G+ ++ + ++L+ MYGK G + AR +FD K+ V+W M+ Y + E
Sbjct: 253 CIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEEC 312
Query: 355 FELVR----ERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDL 410
L+R E+ + F +L +C+ A +G+ V + D I+ +ALVD+
Sbjct: 313 VWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDM 372
Query: 411 YAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEG--MEPDYI 468
YAK G ++ A +F M+ ++ +W AMI G +G E + LF M +E + P+ I
Sbjct: 373 YAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEI 432
Query: 469 TFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLEN 528
TF+ VL ACSH GLV EG R F MV+ Y P VEHY C++DLLGRA +EEA L+ N
Sbjct: 433 TFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRN 492
Query: 529 ADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDA 588
D + W LL AC + E V ++ E+ +LL + G +
Sbjct: 493 LPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEKS 552
Query: 589 ME 590
++
Sbjct: 553 LD 554
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/423 (32%), Positives = 209/423 (49%), Gaps = 49/423 (11%)
Query: 198 HSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFV 257
N V+ +++++ Y N+ + A + FD SPE D+V W +IS EA LF
Sbjct: 56 EKNVVLWTSMINGYLLNKDLVSARRYFDLSPE-RDIVLWNTMISGYIEMGNMLEARSLFD 114
Query: 258 AMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKC 317
M C +V+ +++L+ Y
Sbjct: 115 QMP----------------------------------------CRDVMSWNTVLEGYANI 134
Query: 318 GKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAV---FELVRERG--VSDLYAFGTV 372
G + VFD + ++N SW ++ Y QN V F+ + + G V + V
Sbjct: 135 GDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLV 194
Query: 373 LRACSGVAAVMLGKEVHCQYVRKGGWR--DVIVESALVDLYAKCGCVDFAQRLFLSMEVR 430
L AC+ + A GK VH +Y G+ DV V++AL+D+Y KCG ++ A +F ++ R
Sbjct: 195 LSACAKLGAFDFGKWVH-KYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRR 253
Query: 431 NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYF 490
+ I+WN MI GLA +G GTE L LF +M G+ PD +TF+GVL AC H GLV++G YF
Sbjct: 254 DLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYF 313
Query: 491 ALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSD 550
M ++ I P +EH C++DLL RA + +A + + D +WA LLGA
Sbjct: 314 NSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKK 373
Query: 551 YVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIG 610
E ++I+LEP ++V+L NIY GR++DA ++ M D G KK G SWI
Sbjct: 374 VDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIE 433
Query: 611 SEN 613
+++
Sbjct: 434 TDD 436
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 140/291 (48%), Gaps = 11/291 (3%)
Query: 58 LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLP 117
L P VL+ +++ + + L +L + S N++L Y +G +
Sbjct: 84 LSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMS----WNTVLEGYANIG-DME 138
Query: 118 QAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDL-DMEPNAFTISSVITAA 176
+ +FD + R++ +W LI Y + GR L F +M+D + PN T++ V++A
Sbjct: 139 ACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSAC 198
Query: 177 SKLRDLALGACLHAMVISRGFHSNTV-ISSALVDMYGRNRAVRDALKLFDESPEPEDVVG 235
+KL G +H + G++ V + +AL+DMYG+ A+ A+++F + + D++
Sbjct: 199 AKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVF-KGIKRRDLIS 257
Query: 236 WTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQG-KELHAK 294
W +I+ L + EAL LF M + G+ PD TF +L AC ++G + G ++
Sbjct: 258 WNTMINGLAAHGHGTEALNLFHEM-KNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSM 316
Query: 295 VVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK-NSVSWTAMLSA 344
I + ++D+ + G + QA +++ K ++V W +L A
Sbjct: 317 FTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGA 367
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 165/359 (45%), Gaps = 22/359 (6%)
Query: 116 LPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITA 175
+ A +F + ++++ WTS+I+ Y +++ + F DL E + +++I+
Sbjct: 44 IASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYF----DLSPERDIVLWNTMISG 99
Query: 176 ASKLRDLALGACLHAMVISRGFHS-NTVISSALVDMYGRNRAVRDALKLFDESPEPEDVV 234
++ ++ L + R S NTV+ Y + ++FD+ PE +V
Sbjct: 100 YIEMGNMLEARSLFDQMPCRDVMSWNTVLEG-----YANIGDMEACERVFDDMPE-RNVF 153
Query: 235 GWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAK 294
W +I +N E L F M +VP+ T +L+ACA LG GK +H
Sbjct: 154 SWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKY 213
Query: 295 VVGLGICG-NVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAM---LSAYCQNKE 350
LG +V V+++L+DMYGKCG + A VF + ++ +SW M L+A+ E
Sbjct: 214 GETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTE 273
Query: 351 YEAVFELVRERGVS-DLYAFGTVLRACSGVAAVMLG-KEVHCQYVRKGGWRDVIVESALV 408
+F ++ G+S D F VL AC + V G + + ++ +V
Sbjct: 274 ALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVV 333
Query: 409 DLYAKCGCVDFAQRLFLSMEVR-NQITWNAMIGGLAQNGRGTEVLEL-FEDMIKEGMEP 465
DL ++ G + A M V+ + + W ++G ++ + ++ E+ E++IK +EP
Sbjct: 334 DLLSRAGFLTQAVEFINKMPVKADAVIWATLLGA-SKVYKKVDIGEVALEELIK--LEP 389
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 117/242 (48%), Gaps = 22/242 (9%)
Query: 310 LLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAV---FELVRERGVSDL 366
L M G + A VF + +KN V WT+M++ Y NK+ + F+L ER D+
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPER---DI 90
Query: 367 YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLS 426
+ T++ + ++ + + Q RDV+ + +++ YA G ++ +R+F
Sbjct: 91 VLWNTMISGYIEMGNMLEARSLFDQM----PCRDVMSWNTVLEGYANIGDMEACERVFDD 146
Query: 427 MEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEG-MEPDYITFIGVLFACSHTGLVDE 485
M RN +WN +I G AQNGR +EVL F+ M+ EG + P+ T VL AC+ G D
Sbjct: 147 MPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDF 206
Query: 486 GRRYFALMVDEYGIKPG-----VEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAV 540
G+ V +YG G V N +ID+ G+ IE A + + R D W
Sbjct: 207 GK-----WVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK-RRDLISWNT 260
Query: 541 LL 542
++
Sbjct: 261 MI 262
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 201/413 (48%), Gaps = 37/413 (8%)
Query: 233 VVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELH 292
++ T +S+ +AL LF+ MH L D F L +CA G +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 293 AKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYC---QNK 349
A V N V +LLDMYGKC V AR +FD + +N+V W AM+S Y + K
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 350 E----YEAV--------------------------FELVRE----RGVSDLYAFGTVLRA 375
E YEA+ E R+ R +L ++ A
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 376 CSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITW 435
CS + A L KE+H R ++S LV+ Y +CG + + Q +F SME R+ + W
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 436 NAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVD 495
+++I A +G L+ F++M + PD I F+ VL ACSH GL DE YF M
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQG 311
Query: 496 EYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAE 555
+YG++ +HY+C++D+L R EEA +++ + W LLGAC + AE
Sbjct: 312 DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAE 371
Query: 556 RVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSW 608
AR+++ +EP+ +YVLLG IY +VGR +A +R M++ GVK PG SW
Sbjct: 372 IAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 200/420 (47%), Gaps = 58/420 (13%)
Query: 131 IIAWTSLISAYTRAGRPINSLQLFSQM---LDLDMEPNAFTISSVITAASKLRDLALGAC 187
+I+ T +S+Y G +L LF QM L ++ + F+++ + + A+ R + LG
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLA-LKSCAAAFRPV-LGGS 69
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRND 247
+HA + F SN + AL+DMYG+ +V A KLFDE P+ VV W A+IS T
Sbjct: 70 VHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVV-WNAMISHYTHCG 128
Query: 248 MFREALRLFVAMHRGC----------GLV----------------------PDGFTFGTL 275
+EA+ L+ AM GLV P+ T L
Sbjct: 129 KVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLAL 188
Query: 276 LAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNS 335
++AC+ +G R KE+H+ I + ++S L++ YG+CG + ++VFD + D++
Sbjct: 189 VSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDV 248
Query: 336 VSWTAMLSAYCQNKEYEAVFELVRE----RGVSDLYAFGTVLRACS--GVA--AVMLGKE 387
V+W++++SAY + + E+ + +E + D AF VL+ACS G+A A++ K
Sbjct: 249 VAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKR 308
Query: 388 VHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSM-EVRNQITWNAMIGGLAQNG 446
+ Y + S LVD+ ++ G + A ++ +M E TW A++G G
Sbjct: 309 MQGDYGLRASKDHY---SCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYG 365
Query: 447 RGTEVLELF--EDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIK--PG 502
E+ E+ E ++ E P +G ++ G +E R L + E G+K PG
Sbjct: 366 E-IELAEIAARELLMVEPENPANYVLLGKIYMS--VGRQEEAER-LRLKMKESGVKVSPG 421
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 160/354 (45%), Gaps = 39/354 (11%)
Query: 30 STDSEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAH 89
S ++ + G+ QAL+L ++ L +++ L++C + G ++HAH
Sbjct: 14 SLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAH 73
Query: 90 ALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPIN 149
++KS S+ FVG +LL +Y K + A+ LFD + R+ + W ++IS YT G+
Sbjct: 74 SVKSNFLSNPFVGCALLDMYGKC-LSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 150 SLQLFS---------------------------------QMLDLDMEPNAFTISSVITAA 176
+++L+ +M++ +PN T+ ++++A
Sbjct: 133 AVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSAC 192
Query: 177 SKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGW 236
S + L +H+ + + S LV+ YGR ++ +FD S E DVV W
Sbjct: 193 SAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFD-SMEDRDVVAW 251
Query: 237 TAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVV 296
+++IS + AL+ F M + PD F +L AC++ G + ++
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELA-KVTPDDIAFLNVLKACSHAGLADEALVYFKRMQ 310
Query: 297 G-LGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSV-SWTAMLSAYCQN 348
G G+ + S L+D+ + G+ +A V + +K + +W A+L A C+N
Sbjct: 311 GDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGA-CRN 363
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 148/499 (29%), Positives = 241/499 (48%), Gaps = 46/499 (9%)
Query: 86 LHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAG 145
LH A K G+ + V NSL++ Y K G + A+ +F DI++W ++I A ++
Sbjct: 237 LHCSATKKGLDCEISVVNSLISAYGKCG-NTHMAERMFQDAGSWDIVSWNAIICATAKSE 295
Query: 146 RPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISS 205
P+ +L+LF M + PN T SV+ +S ++ L+ G +H M+I G + V+ +
Sbjct: 296 NPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGN 355
Query: 206 ALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGL 265
AL+D Y + + D+ FD + +++V W A++S D L LF+ M + G
Sbjct: 356 ALIDFYAKCGNLEDSRLCFDYIRD-KNIVCWNALLSGYANKDG-PICLSLFLQMLQ-MGF 412
Query: 266 VPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARV 325
P +TF T L +C + + ++LH+ +V +G N V SSL+ Y K + A +
Sbjct: 413 RPTEYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALL 468
Query: 326 VFD--------------------------------RLGDKNSVSWTAMLSAYCQNKEYEA 353
+ D L ++VSW ++A ++ +E
Sbjct: 469 LLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEE 528
Query: 354 VFELVRERGVS----DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKG-GWRDVIVESALV 408
V EL + S D Y F ++L CS + + LG +H + D V + L+
Sbjct: 529 VIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLI 588
Query: 409 DLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYI 468
D+Y KCG + ++F +N ITW A+I L +G G E LE F++ + G +PD +
Sbjct: 589 DMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRV 648
Query: 469 TFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLEN 528
+FI +L AC H G+V EG F M D YG++P ++HY C +DLL R ++EAE L+
Sbjct: 649 SFISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIRE 707
Query: 529 ADCRYDHSLWAVLLGACTK 547
D +W L C +
Sbjct: 708 MPFPADAPVWRTFLDGCNR 726
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 208/422 (49%), Gaps = 15/422 (3%)
Query: 69 SLLQTCTKTSSFLHGTTLHAHA--LKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
SLL C K SF LHA + L S + +V N++++LY KLG + A +FD +
Sbjct: 17 SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLG-EVSLAGKVFDQM 75
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
R+ +++ ++I Y++ G + +FS+M PN T+S +++ AS D+ G
Sbjct: 76 PERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCAS--LDVRAGT 133
Query: 187 CLHAMVISRG-FHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTR 245
LH + + G F ++ + + L+ +YGR + A ++F++ P + + W ++S L
Sbjct: 134 QLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPF-KSLETWNHMMSLLGH 192
Query: 246 NDMFREALRLFVAMHR-GCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNV 304
+E + F + R G L F +L + + L K+LH G+ +
Sbjct: 193 RGFLKECMFFFRELVRMGASLTESSFL--GVLKGVSCVKDLDISKQLHCSATKKGLDCEI 250
Query: 305 VVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFEL---VRER 361
V +SL+ YGKCG A +F G + VSW A++ A +++ +L + E
Sbjct: 251 SVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEH 310
Query: 362 GVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFA 420
G S + + +VL S V + G+++H ++ G +++ +AL+D YAKCG ++ +
Sbjct: 311 GFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDS 370
Query: 421 QRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHT 480
+ F + +N + WNA++ G A N G L LF M++ G P TF L +C T
Sbjct: 371 RLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVT 429
Query: 481 GL 482
L
Sbjct: 430 EL 431
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 138/561 (24%), Positives = 249/561 (44%), Gaps = 55/561 (9%)
Query: 83 GTTLHAHALKSGIH-SDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAY 141
GT LH +LK G+ +D FVG LL LY +L L A+ +F+ + + + W ++S
Sbjct: 132 GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDL-LEMAEQVFEDMPFKSLETWNHMMSLL 190
Query: 142 TRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNT 201
G + F +++ + + V+ S ++DL + LH +G
Sbjct: 191 GHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEI 250
Query: 202 VISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHR 261
+ ++L+ YG+ A ++F ++ D+V W AII +++ +AL+LFV+M
Sbjct: 251 SVVNSLISAYGKCGNTHMAERMFQDAGS-WDIVSWNAIICATAKSENPLKALKLFVSMPE 309
Query: 262 GCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVG 321
G P+ T+ ++L + + L G+++H ++ G +V+ ++L+D Y KCG +
Sbjct: 310 H-GFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLE 368
Query: 322 QARVVFDRLGDKNSVSWTAMLSAYCQNKEYE---AVFELVRERGVSDL-YAFGTVLRACS 377
+R+ FD + DKN V W A+LS Y NK+ ++F + + G Y F T L++C
Sbjct: 369 DSRLCFDYIRDKNIVCWNALLSGY-ANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSC- 426
Query: 378 GVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGC-------VDFAQ--------- 421
V +++H VR G + V S+L+ YAK +D+A
Sbjct: 427 ---CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLN 483
Query: 422 ----------------RLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEP 465
+L ++E + ++WN I +++ EV+ELF+ M++ + P
Sbjct: 484 IVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRP 543
Query: 466 DYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESL 525
D TF+ +L CS + G L+ N +ID+ G+ I +
Sbjct: 544 DKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKV 603
Query: 526 LENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIE-----LEPDFHLSYVLLGNIYR 580
E + W L+ +C Y + K E +PD +S++ + R
Sbjct: 604 FEETR-EKNLITWTALI-SCLGIHGY--GQEALEKFKETLSLGFKPD-RVSFISILTACR 658
Query: 581 AVGRWNDAMEIRKLMEDRGVK 601
G + M + + M+D GV+
Sbjct: 659 HGGMVKEGMGLFQKMKDYGVE 679
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 185/425 (43%), Gaps = 51/425 (12%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
Y S+L + G +H +K+G + +GN+L+ Y K G +L ++ FD +
Sbjct: 319 YVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCG-NLEDSRLCFDYI 377
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAA--SKLRDLAL 184
++I+ W +L+S Y PI L LF QML + P +T S+ + + ++L+ L
Sbjct: 378 RDKNIVCWNALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQL-- 434
Query: 185 GACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEP-------------- 230
H++++ G+ N + S+L+ Y +N+ + DAL L D + P
Sbjct: 435 ----HSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYS 490
Query: 231 -----------------EDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFG 273
D V W I+ +R+D E + LF M + + PD +TF
Sbjct: 491 RRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQS-NIRPDKYTFV 549
Query: 274 TLLAACANLGWLRQGKELHAKVVGLGI-CGNVVVESSLLDMYGKCGKVGQARVVFDRLGD 332
++L+ C+ L L G +H + C + V + L+DMYGKCG + VF+ +
Sbjct: 550 SILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETRE 609
Query: 333 KNSVSWTAMLSAYCQNKEYEAVFELVRER----GVSDLYAFGTVLRACSGVAAVMLGKEV 388
KN ++WTA++S + + E +E D +F ++L AC V G +
Sbjct: 610 KNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGL 669
Query: 389 HCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEV-RNQITWNAMIGG---LAQ 444
+ G ++ VDL A+ G + A+ L M + W + G A+
Sbjct: 670 FQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFAE 729
Query: 445 NGRGT 449
R T
Sbjct: 730 EQRNT 734
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 172/361 (47%), Gaps = 12/361 (3%)
Query: 169 ISSVITAASKLRDLALGACLHAMVIS--RGFHSNTVISSALVDMYGRNRAVRDALKLFDE 226
+ S++ K A LHA+ I+ + + ++ +Y + V A K+FD+
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 227 SPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLR 286
PE + V + II ++ +A +F M R G +P+ T LL+ CA+L +R
Sbjct: 75 MPE-RNKVSFNTIIKGYSKYGDVDKAWGVFSEM-RYFGYLPNQSTVSGLLS-CASLD-VR 130
Query: 287 QGKELHAKVVGLGI-CGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAY 345
G +LH + G+ + V + LL +YG+ + A VF+ + K+ +W M+S
Sbjct: 131 AGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLL 190
Query: 346 CQN---KEYEAVF-ELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDV 401
KE F ELVR +F VL+ S V + + K++HC +KG ++
Sbjct: 191 GHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEI 250
Query: 402 IVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKE 461
V ++L+ Y KCG A+R+F + ++WNA+I A++ + L+LF M +
Sbjct: 251 SVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEH 310
Query: 462 GMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEE 521
G P+ T++ VL S L+ GR+ +++ G + G+ N +ID + +E+
Sbjct: 311 GFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN-GCETGIVLGNALIDFYAKCGNLED 369
Query: 522 A 522
+
Sbjct: 370 S 370
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 4/191 (2%)
Query: 58 LDPNLKPVLYA--SLLQTCTKTSSFLHGTTLHAHALKSGIH-SDRFVGNSLLTLYLKLGP 114
L N++P Y S+L C+K G+++H K+ +D FV N L+ +Y K G
Sbjct: 537 LQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGS 596
Query: 115 HLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVIT 174
+ +F+ +++I WT+LIS G +L+ F + L L +P+ + S++T
Sbjct: 597 -IRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILT 655
Query: 175 AASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVV 234
A + G L + G VD+ RN +++A L E P P D
Sbjct: 656 ACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAP 715
Query: 235 GWTAIISTLTR 245
W + R
Sbjct: 716 VWRTFLDGCNR 726
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 222 bits (565), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 161/570 (28%), Positives = 283/570 (49%), Gaps = 53/570 (9%)
Query: 86 LHAHALKSGIHSDRFVGNSLLTLYLKLG------PHLPQ-AQTLFDSL--------AVRD 130
+H +K+GI + NS LT + L P+L A+ +F V D
Sbjct: 31 IHGRLIKTGI-----IKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVED 85
Query: 131 IIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHA 190
W ++I +++ P +L L ML+ + + F++S V+ A S+L + G +H
Sbjct: 86 PFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHG 145
Query: 191 MVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFR 250
+ G S+ + + L+ +Y + + + ++FD P+ D V + ++I + +
Sbjct: 146 FLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPK-RDSVSYNSMIDGYVKCGLIV 204
Query: 251 EALRLF-------------VAMHRGCGLVPDGFTFGTLLAA-----------CANLGWLR 286
A LF +M G DG + L A G+++
Sbjct: 205 SARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVK 264
Query: 287 QGKELHAK-VVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAY 345
G+ AK + + +VV ++++D Y K G V A+ +FD++ ++ V++ +M++ Y
Sbjct: 265 HGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGY 324
Query: 346 CQNKEYEAVFELVRERG-----VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRD 400
QNK + E+ + + D VL A + + + ++H V K +
Sbjct: 325 VQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLG 384
Query: 401 VIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIK 460
+ AL+D+Y+KCG + A +F +E ++ WNAMIGGLA +G G ++ + +
Sbjct: 385 GKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIER 444
Query: 461 EGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIE 520
++PD ITF+GVL ACSH+GLV EG F LM ++ I+P ++HY CM+D+L R+ IE
Sbjct: 445 LSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIE 504
Query: 521 EAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHL-SYVLLGNIY 579
A++L+E + +W L AC+ ++ T E VA+ +I L+ ++ SYVLL N+Y
Sbjct: 505 LAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLI-LQAGYNPSSYVLLSNMY 563
Query: 580 RAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
+ G W D +R +M++R ++K+PG SWI
Sbjct: 564 ASFGMWKDVRRVRTMMKERKIEKIPGCSWI 593
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 147/502 (29%), Positives = 238/502 (47%), Gaps = 75/502 (14%)
Query: 171 SVITAASKLRDLALGACLHAMVISRGFHSNTVISSALV--DMYGRNRAVRDALKLFDESP 228
S++ + LR L +H + I G +++ + L+ + A+ A +L P
Sbjct: 10 SLLNSCKNLRALTQ---IHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFP 66
Query: 229 EPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQG 288
EP D + ++ + +D ++ +FV M R + PD F+F ++ A N LR G
Sbjct: 67 EP-DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 289 KELHAKVVGLGICGNVVVESSLLDMYGKCG------------------------------ 318
++H + + G+ ++ V ++L+ MYG CG
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185
Query: 319 -KVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLYAFGT------ 371
V AR +FD++ +N SW ML+ Y + E E+ + E D ++ T
Sbjct: 186 NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIA 245
Query: 372 -----------------------------VLRACSGVAAVMLGKEVHCQYVRKGGWRDVI 402
VL ACS + GK +H +V K G+ ++
Sbjct: 246 HNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILH-GFVEKAGYSWIV 304
Query: 403 -VESALVDLYAKCGCVDFAQRLFLSM-EVRNQITWNAMIGGLAQNGRGTEVLELFEDMIK 460
V +AL+D+Y++CG V A+ +F M E R ++W +MI GLA +G+G E + LF +M
Sbjct: 305 SVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTA 364
Query: 461 EGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIE 520
G+ PD I+FI +L ACSH GL++EG YF+ M Y I+P +EHY CM+DL GR+ ++
Sbjct: 365 YGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQ 424
Query: 521 EAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYR 580
+A + +W LLGAC+ + AE+V +++ EL+P+ VLL N Y
Sbjct: 425 KAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYA 484
Query: 581 AVGRWNDAMEIRKLMEDRGVKK 602
G+W D IRK M + +KK
Sbjct: 485 TAGKWKDVASIRKSMIVQRIKK 506
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 158/358 (44%), Gaps = 65/358 (18%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLG-----------PH 115
+A +++ S G +H ALK G+ S FVG +L+ +Y G H
Sbjct: 109 FAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMH 168
Query: 116 LPQ-------------------AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQ 156
P A+ +FD + VR+ +W +++ Y +AG ++ ++FS+
Sbjct: 169 QPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSE 228
Query: 157 MLDLD-------------------------------MEPNAFTISSVITAASKLRDLALG 185
M D M PN +++ V++A S+ G
Sbjct: 229 MPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG 288
Query: 186 ACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTR 245
LH V G+ +++AL+DMY R V A +F+ E +V WT++I+ L
Sbjct: 289 KILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAM 348
Query: 246 NDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGL-GICGNV 304
+ EA+RLF M G+ PDG +F +LL AC++ G + +G++ +++ + I +
Sbjct: 349 HGQGEEAVRLFNEM-TAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEI 407
Query: 305 VVESSLLDMYGKCGKVGQARVVFDRLG-DKNSVSWTAMLSAYCQNKEYEAVFELVRER 361
++D+YG+ GK+ +A ++ ++ W +L A C + + E V++R
Sbjct: 408 EHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGA-CSSHGNIELAEQVKQR 464
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 28/214 (13%)
Query: 41 DGSLRQA-LHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDR 99
+GS ++ L+ + + PN V +L C+++ SF G LH K+G
Sbjct: 247 NGSFNESFLYFRELQRAGMSPN--EVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIV 304
Query: 100 FVGNSLLTLYLKLGPHLPQAQTLFDSLA-VRDIIAWTSLISAYTRAGRPINSLQLFSQML 158
V N+L+ +Y + G ++P A+ +F+ + R I++WTS+I+ G+ +++LF++M
Sbjct: 305 SVNNALIDMYSRCG-NVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMT 363
Query: 159 DLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRG----------FHSNTVIS--SA 206
+ P+ + S+ L AC HA +I G +H I
Sbjct: 364 AYGVTPDGISFISL-----------LHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGC 412
Query: 207 LVDMYGRNRAVRDALKLFDESPEPEDVVGWTAII 240
+VD+YGR+ ++ A + P P + W ++
Sbjct: 413 MVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLL 446
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 147/531 (27%), Positives = 257/531 (48%), Gaps = 43/531 (8%)
Query: 92 KSGIHSDRFVGNSLLTLYLKLGP-----HLPQAQTLFDSLAVRDIIAWTSLISAYTRAGR 146
K GI N L+ Y +LG L Q F A D+ WT++IS G
Sbjct: 275 KEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITA--DVFTWTAMISGLIHNGM 332
Query: 147 PINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSA 206
+L +F +M + PNA TI S ++A S L+ + G+ +H++ + GF + ++ ++
Sbjct: 333 RYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS 392
Query: 207 LVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLV 266
LVDMY + + DA K+FD S + +DV W ++I+ + +A LF M L
Sbjct: 393 LVDMYSKCGKLEDARKVFD-SVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDA-NLR 450
Query: 267 PDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVV 326
P+ T+ T+++ G+++ G E A +D++ + K G+ +
Sbjct: 451 PNIITWNTMIS-----GYIKNGDEGEA-----------------MDLFQRMEKDGKVQ-- 486
Query: 327 FDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRE----RGVSDLYAFGTVLRACSGVAAV 382
+N+ +W +++ Y QN + + EL R+ R + + ++L AC+ +
Sbjct: 487 ------RNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGA 540
Query: 383 MLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGL 442
+ +E+H +R+ V++AL D YAK G +++++ +FL ME ++ ITWN++IGG
Sbjct: 541 KMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGY 600
Query: 443 AQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPG 502
+G L LF M +G+ P+ T ++ A G VDEG++ F + ++Y I P
Sbjct: 601 VLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPA 660
Query: 503 VEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMI 562
+EH + M+ L GRA +EEA ++ + + + +W L C D A A +
Sbjct: 661 LEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLF 720
Query: 563 ELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSEN 613
LEP+ + ++ IY + ++E K D +KK G+SWI N
Sbjct: 721 SLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRN 771
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 219/485 (45%), Gaps = 44/485 (9%)
Query: 32 DSEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHAL 91
D + C++GSL +A L+ S +K Y LL++C + S G LHA
Sbjct: 50 DEQFDYLCRNGSLLEAEKALD-SLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA--- 105
Query: 92 KSGIHS--DRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPIN 149
+ G+ + D FV LL++Y K G + A+ +FDS+ R++ W+++I AY+R R
Sbjct: 106 RFGLFTEPDVFVETKLLSMYAKCGC-IADARKVFDSMRERNLFTWSAMIGAYSRENRWRE 164
Query: 150 SLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVD 209
+LF M+ + P+ F ++ + D+ G +H++VI G S +S++++
Sbjct: 165 VAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILA 224
Query: 210 MYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDG 269
+Y + + A K F E DV+ W +++ +N EA+ L M + G+ P
Sbjct: 225 VYAKCGELDFATKFFRRMRE-RDVIAWNSVLLAYCQNGKHEEAVELVKEMEKE-GISPGL 282
Query: 270 FTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDR 329
T+ L+ LG +L K+ GI +V
Sbjct: 283 VTWNILIGGYNQLGKCDAAMDLMQKMETFGITADV------------------------- 317
Query: 330 LGDKNSVSWTAMLSAYCQNKEYEAVFELVRERG----VSDLYAFGTVLRACSGVAAVMLG 385
+WTAM+S N ++ R+ V + + + ACS + + G
Sbjct: 318 ------FTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQG 371
Query: 386 KEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQN 445
EVH V+ G DV+V ++LVD+Y+KCG ++ A+++F S++ ++ TWN+MI G Q
Sbjct: 372 SEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQA 431
Query: 446 GRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEH 505
G + ELF M + P+ IT+ ++ G E F M + ++
Sbjct: 432 GYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTAT 491
Query: 506 YNCMI 510
+N +I
Sbjct: 492 WNLII 496
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 204/437 (46%), Gaps = 51/437 (11%)
Query: 182 LALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIS 241
+ LG LHA + + + L+ MY + + DA K+FD E ++ W+A+I
Sbjct: 97 IHLGRILHAR-FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRE-RNLFTWSAMIG 154
Query: 242 TLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGIC 301
+R + +RE +LF M + G++PD F F +L CAN G + GK +H+ V+ LG+
Sbjct: 155 AYSRENRWREVAKLFRLMMKD-GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMS 213
Query: 302 GNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRER 361
+ V +S+L +Y KCG++ A F R+ +++ ++W ++L AYCQN ++E ELV+E
Sbjct: 214 SCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKE- 272
Query: 362 GVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
++G ++ + L+ Y + G D A
Sbjct: 273 ------------------------------MEKEGISPGLVTWNILIGGYNQLGKCDAAM 302
Query: 422 RLFLSME----VRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFAC 477
L ME + TW AMI GL NG + L++F M G+ P+ +T + + AC
Sbjct: 303 DLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSAC 362
Query: 478 SHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSL 537
S ++++G ++ V + G V N ++D+ + +E+A + ++ + D
Sbjct: 363 SCLKVINQGSEVHSIAV-KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK-DVYT 420
Query: 538 WAVLL------GACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEI 591
W ++ G C K + T + A L P+ +++ + + Y G +AM++
Sbjct: 421 WNSMITGYCQAGYCGKAYELFTRMQDA----NLRPNI-ITWNTMISGYIKNGDEGEAMDL 475
Query: 592 RKLMEDRGVKKLPGKSW 608
+ ME G + +W
Sbjct: 476 FQRMEKDGKVQRNTATW 492
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 7/210 (3%)
Query: 35 ILQHCKDGSLRQALHLLNTSQ-TTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKS 93
I + ++G +AL L Q + PN +L SLL C +H L+
Sbjct: 496 IAGYIQNGKKDEALELFRKMQFSRFMPNSVTIL--SLLPACANLLGAKMVREIHGCVLRR 553
Query: 94 GIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQL 153
+ + V N+L Y K G + ++T+F + +DII W SLI Y G +L L
Sbjct: 554 NLDAIHAVKNALTDTYAKSG-DIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALAL 612
Query: 154 FSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVIS--SALVDMY 211
F+QM + PN T+SS+I A + ++ G + I+ +H + SA+V +Y
Sbjct: 613 FNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVF-YSIANDYHIIPALEHCSAMVYLY 671
Query: 212 GRNRAVRDALKLFDESPEPEDVVGWTAIIS 241
GR + +AL+ E + W + ++
Sbjct: 672 GRANRLEEALQFIQEMNIQSETPIWESFLT 701
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 209/436 (47%), Gaps = 12/436 (2%)
Query: 188 LHAMVISRGFHSNTVISSAL-----VDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIST 242
+H+ VI G + I + L V + G + FD P D W +I
Sbjct: 24 IHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSD---WNYLIRG 80
Query: 243 LTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICG 302
+ + ++ + M PD FTF L +C + + + E+H V+ G
Sbjct: 81 FSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLD 140
Query: 303 NVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERG 362
+ +V +SL+ Y G V A VFD + ++ VSW M+ + + + + G
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 363 ----VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
D Y +L +C+ V+A+ +G +H V V +AL+D+YAKCG ++
Sbjct: 201 NEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLE 260
Query: 419 FAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACS 478
A +F M R+ +TWN+MI G +G G E + F M+ G+ P+ ITF+G+L CS
Sbjct: 261 NAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCS 320
Query: 479 HTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLW 538
H GLV EG +F +M ++ + P V+HY CM+DL GRA +E + ++ + C D LW
Sbjct: 321 HQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLW 380
Query: 539 AVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDR 598
LLG+C + E +K+++LE YVL+ +IY A +RKL+
Sbjct: 381 RTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSH 440
Query: 599 GVKKLPGKSWIGSENQ 614
++ +PG SWI +Q
Sbjct: 441 DLQTVPGWSWIEIGDQ 456
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 180/388 (46%), Gaps = 16/388 (4%)
Query: 63 KPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTL-YLKLGPHLPQAQT 121
K + +LQ C +H+H + +G+ + N LL + + L AQ
Sbjct: 4 KARVIVRMLQGCNSMKKL---RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQL 60
Query: 122 LFDSLAVRDIIA-WTSLISAYTRAGRPINSLQLFSQMLDLDM-EPNAFTISSVITAASKL 179
LFD + W LI ++ + P+NS+ +++ML + P+ FT + + + ++
Sbjct: 61 LFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERI 120
Query: 180 RDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAI 239
+ + +H VI GF + +++++LV Y N +V A K+FDE P D+V W +
Sbjct: 121 KSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMP-VRDLVSWNVM 179
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG 299
I + + +AL ++ M G+ D +T LL++CA++ L G LH +
Sbjct: 180 ICCFSHVGLHNQALSMYKRMGNE-GVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIR 238
Query: 300 ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAY-CQNKEYEAV--FE 356
V V ++L+DMY KCG + A VF+ + ++ ++W +M+ Y EA+ F
Sbjct: 239 CESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFR 298
Query: 357 LVRERGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVE--SALVDLYAK 413
+ GV + F +L CS V G E H + + V+ +VDLY +
Sbjct: 299 KMVASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGR 357
Query: 414 CGCVDFA-QRLFLSMEVRNQITWNAMIG 440
G ++ + + ++ S + + W ++G
Sbjct: 358 AGQLENSLEMIYASSCHEDPVLWRTLLG 385
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 145/288 (50%), Gaps = 9/288 (3%)
Query: 60 PNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQA 119
P+L +A L++C + S +H ++SG D V SL+ Y G + A
Sbjct: 105 PDLFTFNFA--LKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGS-VEIA 161
Query: 120 QTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKL 179
+FD + VRD+++W +I ++ G +L ++ +M + + +++T+ +++++ + +
Sbjct: 162 SKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHV 221
Query: 180 RDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAI 239
L +G LH + S +S+AL+DMY + ++ +A+ +F+ DV+ W ++
Sbjct: 222 SALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFN-GMRKRDVLTWNSM 280
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVG-- 297
I + EA+ F M G+ P+ TF LL C++ G +++G E H +++
Sbjct: 281 IIGYGVHGHGVEAISFFRKM-VASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQ 338
Query: 298 LGICGNVVVESSLLDMYGKCGKVGQA-RVVFDRLGDKNSVSWTAMLSA 344
+ NV ++D+YG+ G++ + +++ ++ V W +L +
Sbjct: 339 FHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGS 386
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 127/381 (33%), Positives = 202/381 (53%), Gaps = 35/381 (9%)
Query: 262 GCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYG------ 315
G L PD +T L+ AC L G ++H + G + V++ L+ +Y
Sbjct: 101 GNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLD 160
Query: 316 -------------------------KCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQ--- 347
+CG V AR +F+ + +++ ++W AM+S Y Q
Sbjct: 161 SCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGE 220
Query: 348 NKEYEAVFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESA 406
++E VF L++ GV + A +VL AC+ + A+ G+ H R V + +
Sbjct: 221 SREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATT 280
Query: 407 LVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPD 466
LVDLYAKCG ++ A +F ME +N TW++ + GLA NG G + LELF M ++G+ P+
Sbjct: 281 LVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPN 340
Query: 467 YITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLL 526
+TF+ VL CS G VDEG+R+F M +E+GI+P +EHY C++DL RA +E+A S++
Sbjct: 341 AVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSII 400
Query: 527 ENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWN 586
+ + ++W+ LL A + ++KM+ELE H +YVLL NIY W+
Sbjct: 401 QQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWD 460
Query: 587 DAMEIRKLMEDRGVKKLPGKS 607
+ +R+ M+ +GV+K PG S
Sbjct: 461 NVSHVRQSMKSKGVRKQPGCS 481
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 185/401 (46%), Gaps = 42/401 (10%)
Query: 79 SFLHGTTLHAHALKSG-IHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSL 137
+F +HA G + D VG+ + + L +L A + D + A S+
Sbjct: 18 TFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSM 77
Query: 138 ISAYTRAGRPINSLQLFSQMLDL--DMEPNAFTISSVITAASKLRDLALGACLHAMVISR 195
I A+ ++ P S + ++L D++P+ +T++ ++ A + LR G +H M I R
Sbjct: 78 IRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRR 137
Query: 196 GFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPE------------------------ 231
GF ++ + + L+ +Y + K+F+ P P+
Sbjct: 138 GFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLF 197
Query: 232 ------DVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWL 285
D + W A+IS + REAL +F M G+ +G ++L+AC LG L
Sbjct: 198 EGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE-GVKVNGVAMISVLSACTQLGAL 256
Query: 286 RQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAY 345
QG+ H+ + I V + ++L+D+Y KCG + +A VF + +KN +W++ L+
Sbjct: 257 DQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGL 316
Query: 346 CQNKEYEA---VFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDV 401
N E +F L+++ GV+ + F +VLR CS V V G+ H +R +
Sbjct: 317 AMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR-HFDSMRNEFGIEP 375
Query: 402 IVE--SALVDLYAKCGCVDFAQRLFLSMEVR-NQITWNAMI 439
+E LVDLYA+ G ++ A + M ++ + W++++
Sbjct: 376 QLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 158/355 (44%), Gaps = 37/355 (10%)
Query: 32 DSEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYAS--LLQTCTKTSSFLHGTTLHAH 89
+S I HCK ++ ++ + +LKP Y L+Q CT G +H
Sbjct: 75 NSMIRAHCKSPVPEKSFDFYRRILSSGN-DLKPDNYTVNFLVQACTGLRMRETGLQVHGM 133
Query: 90 ALKSGIHSDRFVGNSLLTLYLKLG---------PHLPQ---------------------A 119
++ G +D V L++LY +LG +P A
Sbjct: 134 TIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFA 193
Query: 120 QTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKL 179
+ LF+ + RD IAW ++IS Y + G +L +F M ++ N + SV++A ++L
Sbjct: 194 RKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQL 253
Query: 180 RDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAI 239
L G H+ + +++ LVD+Y + + A+++F E ++V W++
Sbjct: 254 GALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVF-WGMEEKNVYTWSSA 312
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQG-KELHAKVVGL 298
++ L N + L LF M + G+ P+ TF ++L C+ +G++ +G + +
Sbjct: 313 LNGLAMNGFGEKCLELFSLMKQD-GVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEF 371
Query: 299 GICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK-NSVSWTAMLSAYCQNKEYE 352
GI + L+D+Y + G++ A + ++ K ++ W+++L A K E
Sbjct: 372 GIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLE 426
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 132/309 (42%), Gaps = 61/309 (19%)
Query: 257 VAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG------ICGNVVVESSL 310
+ H L+ G TF ++ +++HAK+ G + G+ V +L
Sbjct: 4 IGKHPAIALLDSGITF-------------KEVRQIHAKLYVDGTLKDDHLVGHFVKAVAL 50
Query: 311 LDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVS------ 364
D + A + DR + +M+ A+C++ E F+ R S
Sbjct: 51 SDH----KYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKP 106
Query: 365 DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD------ 418
D Y +++AC+G+ G +VH +R+G D V++ L+ LYA+ GC+D
Sbjct: 107 DNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVF 166
Query: 419 -------------------------FAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLE 453
FA++LF M R+ I WNAMI G AQ G E L
Sbjct: 167 NSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALN 226
Query: 454 LFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLL 513
+F M EG++ + + I VL AC+ G +D+G R+ ++ IK V ++DL
Sbjct: 227 VFHLMQLEGVKVNGVAMISVLSACTQLGALDQG-RWAHSYIERNKIKITVRLATTLVDLY 285
Query: 514 GRAEMIEEA 522
+ +E+A
Sbjct: 286 AKCGDMEKA 294
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 216 bits (549), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 142/455 (31%), Positives = 231/455 (50%), Gaps = 20/455 (4%)
Query: 171 SVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMY----GRNRAVRDALKLFDE 226
S+I A+ + + H++ I G H NT S L+ + N+ A +FD
Sbjct: 13 SLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDS 72
Query: 227 SPEPEDVVGWTAIISTLTRNDMFREALRLFVAM--HRGCGLVPDGFTFGTLLAACANLGW 284
P V + +I +R+ LR F+ M + P TF L+ AC +
Sbjct: 73 IEIPNSFV-YDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACF 131
Query: 285 LRQGKELHAKVVGLGI-CGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLS 343
GK++H VV G+ + V++ +L +Y + + AR VFD + + V W +++
Sbjct: 132 FSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMN 191
Query: 344 AYCQ---NKEYEAVFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGW- 398
Y + E VF+ + RG+ D ++ T L AC+ V A+ GK +H ++V+K W
Sbjct: 192 GYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIH-EFVKKKRWI 250
Query: 399 -RDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFED 457
DV V +ALVD+YAKCGC++ A +F + RN +W A+IGG A G + +
Sbjct: 251 ESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDR 310
Query: 458 MIKE-GMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRA 516
+ +E G++PD + +GVL AC+H G ++EGR M YGI P EHY+C++DL+ RA
Sbjct: 311 IEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRA 370
Query: 517 EMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEP----DFHLSY 572
+++A L+E + S+W LL C + E + +++LE + +
Sbjct: 371 GRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAAL 430
Query: 573 VLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKS 607
V L NIY +V R +A ++R ++E RG++K PG S
Sbjct: 431 VQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWS 465
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 195/403 (48%), Gaps = 18/403 (4%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYL---KLGPHLPQAQTLF 123
+ SL+ + ++ + H+ + G+H + + + LLT +L L H A ++F
Sbjct: 11 WKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIF 70
Query: 124 DSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQML---DLDMEPNAFTISSVITAASKLR 180
DS+ + + + ++I +R+ +P L+ F M+ + D+ P+ T +I A K
Sbjct: 71 DSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKAC 130
Query: 181 DLALGACLHAMVISRG-FHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAI 239
++G +H V+ G F S+ + + ++ +Y ++ + DA K+FDE P+P DVV W +
Sbjct: 131 FFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQP-DVVKWDVL 189
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV-VGL 298
++ R + E L +F M G+ PD F+ T L ACA +G L QGK +H V
Sbjct: 190 MNGYVRCGLGSEGLEVFKEMLVR-GIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKR 248
Query: 299 GICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYC----QNKEYEAV 354
I +V V ++L+DMY KCG + A VF++L +N SW A++ Y K +
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCL 308
Query: 355 FELVRERGVS-DLYAFGTVLRACSGVAAVMLGKE-VHCQYVRKGGWRDVIVESALVDLYA 412
+ RE G+ D VL AC+ + G+ + R G S +VDL
Sbjct: 309 DRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMC 368
Query: 413 KCGCVDFAQRLFLSMEVRNQIT-WNAMIGGLAQNGRGTEVLEL 454
+ G +D A L M ++ + W A++ G + + E+ EL
Sbjct: 369 RAGRLDDALDLIEKMPMKPLASVWGALLNG-CRTHKNVELGEL 410
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 153/313 (48%), Gaps = 8/313 (2%)
Query: 44 LRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIH-SDRFVG 102
LR L ++ + + P+ + + L+ C K F G +H +K+G+ SD V
Sbjct: 98 LRYFLLMVKEEEEDITPSY--LTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQ 155
Query: 103 NSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDM 162
+L +Y++ L A+ +FD + D++ W L++ Y R G L++F +ML +
Sbjct: 156 TGVLRIYVE-DKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGI 214
Query: 163 EPNAFTISSVITAASKLRDLALGACLHAMV-ISRGFHSNTVISSALVDMYGRNRAVRDAL 221
EP+ F++++ +TA +++ LA G +H V R S+ + +ALVDMY + + A+
Sbjct: 215 EPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAV 274
Query: 222 KLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACAN 281
++F E +V W A+I ++A + R G+ PD +LAACA+
Sbjct: 275 EVF-EKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAH 333
Query: 282 LGWLRQGKELHAKVVG-LGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVS-WT 339
G+L +G+ + + GI S ++D+ + G++ A + +++ K S W
Sbjct: 334 GGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWG 393
Query: 340 AMLSAYCQNKEYE 352
A+L+ +K E
Sbjct: 394 ALLNGCRTHKNVE 406
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 142/455 (31%), Positives = 229/455 (50%), Gaps = 20/455 (4%)
Query: 171 SVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMY----GRNRAVRDALKLFDE 226
S+I A+ + + H++ I G H NT S L+ + N+ A +FD
Sbjct: 13 SLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDS 72
Query: 227 SPEPEDVVGWTAIISTLTRNDMFREALRLFVAM--HRGCGLVPDGFTFGTLLAACANLGW 284
P V + +I +R+ LR F+ M + P TF L+ AC +
Sbjct: 73 IEIPNSFV-YDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACF 131
Query: 285 LRQGKELHAKVVGLGI-CGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLS 343
GK++H VV G+ + V++ +L +Y + + AR VFD + + V W +++
Sbjct: 132 FSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMN 191
Query: 344 AYCQNKEYEAVFELVRERGVS----DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGW- 398
Y + E+ RE V D ++ T L AC+ V A+ GK +H ++V+K W
Sbjct: 192 GYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIH-EFVKKKSWI 250
Query: 399 -RDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFED 457
DV V +ALVD+YAKCGC++ A +F + RN +W A+IGG A G + + E
Sbjct: 251 ESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLER 310
Query: 458 MIKE-GMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRA 516
+ +E G++PD + +GVL AC+H G ++EGR M Y I P EHY+C++DL+ RA
Sbjct: 311 LEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRA 370
Query: 517 EMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEP----DFHLSY 572
+++A +L+E + S+W LL C + E + +++LE + +
Sbjct: 371 GRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAAL 430
Query: 573 VLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKS 607
V L NIY +V R +A ++R ++E RGV+K PG S
Sbjct: 431 VQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWS 465
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 196/407 (48%), Gaps = 26/407 (6%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYL---KLGPHLPQAQTLF 123
+ SL+ + ++ + H+ + G+H + + + LLT +L L H A ++F
Sbjct: 11 WKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIF 70
Query: 124 DSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQML---DLDMEPNAFTISSVITAASKLR 180
DS+ + + + ++I +R+ +P L+ F M+ + D+ P+ T +I A K
Sbjct: 71 DSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKAC 130
Query: 181 DLALGACLHAMVISRG-FHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAI 239
++G +H V+ G F S++ + + ++ +Y ++ + DA K+FDE P+P DVV W +
Sbjct: 131 FFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQP-DVVKWDVL 189
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG 299
++ R + E L +F M GL PD F+ T L ACA +G L QGK +H V
Sbjct: 190 MNGYVRCGLGSEGLEVFREMLVK-GLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKS 248
Query: 300 -ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYC----QNKEYEAV 354
I +V V ++L+DMY KCG + A VF +L +N SW A++ Y K +
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCL 308
Query: 355 FELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVE-----SALV 408
L RE G+ D VL AC+ + G+ + + R I S +V
Sbjct: 309 ERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSM----LENMEARYEITPKHEHYSCIV 364
Query: 409 DLYAKCGCVDFAQRLFLSMEVRNQIT-WNAMIGGLAQNGRGTEVLEL 454
DL + G +D A L M ++ + W A++ G + + E+ EL
Sbjct: 365 DLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG-CRTHKNVELGEL 410
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 154/313 (49%), Gaps = 8/313 (2%)
Query: 44 LRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIH-SDRFVG 102
LR L ++ + + P+ + + L+ C K F G +H +K+G+ SD V
Sbjct: 98 LRYFLLMVKEEEEDIAPSY--LTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQ 155
Query: 103 NSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDM 162
+L +Y++ L A+ +FD + D++ W L++ Y R G L++F +ML +
Sbjct: 156 TGVLRIYVE-DKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGL 214
Query: 163 EPNAFTISSVITAASKLRDLALGACLHAMVISRGF-HSNTVISSALVDMYGRNRAVRDAL 221
EP+ F++++ +TA +++ LA G +H V + + S+ + +ALVDMY + + A+
Sbjct: 215 EPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAV 274
Query: 222 KLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACAN 281
++F + +V W A+I ++A+ + R G+ PD +LAACA+
Sbjct: 275 EVFKKLTR-RNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAH 333
Query: 282 LGWLRQGKELHAKVVG-LGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVS-WT 339
G+L +G+ + + I S ++D+ + G++ A + +++ K S W
Sbjct: 334 GGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWG 393
Query: 340 AMLSAYCQNKEYE 352
A+L+ +K E
Sbjct: 394 ALLNGCRTHKNVE 406
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 232/464 (50%), Gaps = 51/464 (10%)
Query: 188 LHAMVISRG------FHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIS 241
+H ++I+ G F S T+ SAL + V A K + +P + GW +I
Sbjct: 27 IHTLLITLGLSEEEPFVSQTLSFSAL----SSSGDVDYAYKFLSKLSDPPNY-GWNFVIR 81
Query: 242 TLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG-- 299
+ + +++ +++ M R GL+PD T+ L+ + + L + G LH VV G
Sbjct: 82 GFSNSRNPEKSISVYIQMLR-FGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLE 140
Query: 300 ----ICG-------------------------NVVVESSLLDMYGKCGKVGQARVVFDRL 330
IC N+V +S+LD Y K G V AR+VFD +
Sbjct: 141 WDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEM 200
Query: 331 GDKNSVSWTAMLSAYCQNKEYEAVFELVRE-----RGVSDLYAFGTVLRACSGVAAVMLG 385
+++ V+W++M+ Y + EY E+ + ++ +V+ AC+ + A+ G
Sbjct: 201 SERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRG 260
Query: 386 KEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR--NQITWNAMIGGLA 443
K VH + VI++++L+D+YAKCG + A +F V+ + + WNA+IGGLA
Sbjct: 261 KTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLA 320
Query: 444 QNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGV 503
+G E L+LF M + ++PD ITF+ +L ACSH GLV E +F + E G +P
Sbjct: 321 SHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KESGAEPKS 379
Query: 504 EHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIE 563
EHY CM+D+L RA ++++A + + S+ LL C + AE V +K+IE
Sbjct: 380 EHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIE 439
Query: 564 LEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKS 607
L+P YV L N+Y ++ A +R+ ME +GVKK+ G S
Sbjct: 440 LQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHS 483
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 161/367 (43%), Gaps = 39/367 (10%)
Query: 134 WTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVI 193
W +I ++ + P S+ ++ QML + P+ T ++ ++S+L + LG LH V+
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 194 SRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPE---------------------- 231
G + I + L+ MYG R A KLFDE P
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 195
Query: 232 --------DVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLG 283
DVV W+++I + + +AL +F M R + T +++ ACA+LG
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255
Query: 284 WLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDR--LGDKNSVSWTAM 341
L +GK +H ++ + + V++++SL+DMY KCG +G A VF R + + +++ W A+
Sbjct: 256 ALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAI 315
Query: 342 LSAYCQN---KEYEAVFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGG 397
+ + +E +F +RE + D F +L ACS V G
Sbjct: 316 IGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGA 375
Query: 398 WRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFED 457
+ +VD+ ++ G V A M ++ +M+G L LEL E
Sbjct: 376 EPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPT---GSMLGALLNGCINHGNLELAET 432
Query: 458 MIKEGME 464
+ K+ +E
Sbjct: 433 VGKKLIE 439
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 161/367 (43%), Gaps = 46/367 (12%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLY---------LKLGPHLP 117
Y L+++ ++ S+ G +LH +KSG+ D F+ N+L+ +Y KL +P
Sbjct: 111 YPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMP 170
Query: 118 Q---------------------AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQ 156
A+ +FD ++ RD++ W+S+I Y + G +L++F Q
Sbjct: 171 HKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQ 230
Query: 157 MLDL-DMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNR 215
M+ + + N T+ SVI A + L L G +H ++ ++ ++L+DMY +
Sbjct: 231 MMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCG 290
Query: 216 AVRDALKLFDESPEPE-DVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGT 274
++ DA +F + E D + W AII L + RE+L+LF M R + PD TF
Sbjct: 291 SIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKM-RESKIDPDEITFLC 349
Query: 275 LLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKN 334
LLAAC++ G +++ + G + ++D+ + G V A + K
Sbjct: 350 LLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKP 409
Query: 335 SVSWTAMLSAYCQNKEYEAVFELV-------------RERGVSDLYAFGTVLRACSGVAA 381
+ S L C N + E V R G++++YA RA +
Sbjct: 410 TGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMRE 469
Query: 382 VMLGKEV 388
M K V
Sbjct: 470 AMEKKGV 476
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 132/319 (41%), Gaps = 42/319 (13%)
Query: 290 ELHAKVVGLGICGNVVVESSLLDM--YGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQ 347
++H ++ LG+ S L G V A +L D + W ++ +
Sbjct: 26 KIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSN 85
Query: 348 NKEYE----AVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIV 403
++ E +++R + D + ++++ S ++ LG +HC V+ G D+ +
Sbjct: 86 SRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFI 145
Query: 404 ESALVDLYAKCGCVDFAQRLFLSMEVRNQITWN--------------------------- 436
+ L+ +Y A++LF M +N +TWN
Sbjct: 146 CNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDV 205
Query: 437 ----AMIGGLAQNGRGTEVLELFEDMIKEG-MEPDYITFIGVLFACSHTGLVDEGRRYFA 491
+MI G + G + LE+F+ M++ G + + +T + V+ AC+H G ++ G+
Sbjct: 206 VTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHR 265
Query: 492 LMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCR-YDHSLWAVLLGACTKCSD 550
++D + + V +ID+ + I +A S+ A + D +W ++G
Sbjct: 266 YILDVH-LPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGF 324
Query: 551 YVTAERVARKMIE--LEPD 567
+ ++ KM E ++PD
Sbjct: 325 IRESLQLFHKMRESKIDPD 343
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 101/268 (37%), Gaps = 39/268 (14%)
Query: 33 SEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALK 92
S I + K G +AL + + V S++ C + G T+H + L
Sbjct: 210 SMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILD 269
Query: 93 SGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVR--DIIAWTSLISAYTRAGRPINS 150
+ + SL+ +Y K G + A ++F +V+ D + W ++I G S
Sbjct: 270 VHLPLTVILQTSLIDMYAKCGS-IGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRES 328
Query: 151 LQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDM 210
LQLF +M + ++P+ T + L AC H ++ +H
Sbjct: 329 LQLFHKMRESKIDPDEITFLCL-----------LAACSHGGLVKEAWH------------ 365
Query: 211 YGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGF 270
+LK P+ E + ++ L+R + ++A M + P G
Sbjct: 366 ------FFKSLKESGAEPKSEH---YACMVDVLSRAGLVKDAHDFISEM----PIKPTGS 412
Query: 271 TFGTLLAACANLGWLRQGKELHAKVVGL 298
G LL C N G L + + K++ L
Sbjct: 413 MLGALLNGCINHGNLELAETVGKKLIEL 440
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 197/394 (50%), Gaps = 39/394 (9%)
Query: 250 REALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESS 309
++AL + + R G VPD +TF +L++ + GK H + + G + V++S
Sbjct: 100 KQALGFYFDILR-FGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNS 158
Query: 310 LLDMYGKCGKVGQARVVF-------------------------------DRLGDKNSVSW 338
L+ MY CG + A+ +F D + DKN +SW
Sbjct: 159 LMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISW 218
Query: 339 TAMLSAYCQNKEYEAVFELVRERGVSDLYAFGT----VLRACSGVAAVMLGKEVHCQYVR 394
M+SAY L RE + + +L AC A + G+ VH +R
Sbjct: 219 NIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIR 278
Query: 395 KGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLEL 454
V++++AL+D+Y KC V A+R+F S+ +RN++TWN MI +GR LEL
Sbjct: 279 TFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLEL 338
Query: 455 FEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLG 514
FE MI + PD +TF+GVL C+ GLV +G+ Y++LMVDE+ IKP H CM +L
Sbjct: 339 FEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYS 398
Query: 515 RAEMIEEAESLLEN---ADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLS 571
A EEAE L+N D + + WA LL + + E +A+ +IE +P +
Sbjct: 399 SAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKY 458
Query: 572 YVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPG 605
Y LL NIY GRW D +R+++++R + ++PG
Sbjct: 459 YHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPG 492
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 182/429 (42%), Gaps = 39/429 (9%)
Query: 77 TSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTS 136
++S H +HA + SG D LL + G + T+ ++ +
Sbjct: 32 SNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGD---SSYTVSIYRSIGKLYCANP 88
Query: 137 LISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRG 196
+ AY + P +L + +L P+++T S+I+ K + G H I G
Sbjct: 89 VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG 148
Query: 197 FHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLF 256
+ ++L+ MY A+ A KLF E P+ D+V W +II+ + RN A +LF
Sbjct: 149 CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPK-RDIVSWNSIIAGMVRNGDVLAAHKLF 207
Query: 257 --------------VAMHRGCG-----------LVPDGF-----TFGTLLAACANLGWLR 286
++ + G +V GF T LL AC L+
Sbjct: 208 DEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLK 267
Query: 287 QGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYC 346
+G+ +HA ++ + +VV++++L+DMYGKC +VG AR +FD L +N V+W M+ A+C
Sbjct: 268 EGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHC 327
Query: 347 QNKEYEAVFELVRE--RGV--SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR-DV 401
+ E EL G+ D F VL C+ V G+ + V + + +
Sbjct: 328 LHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNF 387
Query: 402 IVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKE 461
+ + +LY+ G + A+ ++ + + L + R T L E + K
Sbjct: 388 GHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKS 447
Query: 462 GMEPDYITF 470
+E D + +
Sbjct: 448 LIETDPLNY 456
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 136/313 (43%), Gaps = 37/313 (11%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYL---------KLGPHLP 117
+ SL+ KT G H A+K G V NSL+ +Y KL +P
Sbjct: 121 FVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIP 180
Query: 118 Q---------------------AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQ 156
+ A LFD + ++II+W +ISAY A P S+ LF +
Sbjct: 181 KRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFRE 240
Query: 157 MLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRA 216
M+ + N T+ ++ A + L G +HA +I +S+ VI +AL+DMYG+ +
Sbjct: 241 MVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKE 300
Query: 217 VRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLL 276
V A ++FD S + V W +I + L LF AM G L PD TF +L
Sbjct: 301 VGLARRIFD-SLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGM-LRPDEVTFVGVL 358
Query: 277 AACANLGWLRQGKELHAKVVG-LGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKN- 334
CA G + QG+ ++ +V I N + + ++Y G +A L D++
Sbjct: 359 CGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDV 418
Query: 335 ---SVSWTAMLSA 344
S W +LS+
Sbjct: 419 TPESTKWANLLSS 431
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/459 (29%), Positives = 234/459 (50%), Gaps = 39/459 (8%)
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRND 247
+HA ++ H + ++ + + + G A ++F P +V+ + A+I +
Sbjct: 23 IHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNP-NVLVFNAMIKCYSLVG 81
Query: 248 MFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVE 307
E+L F +M + G+ D +T+ LL +C++L LR GK +H +++ G +
Sbjct: 82 PPLESLSFFSSM-KSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIR 140
Query: 308 SSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEA---VFELVRERGV- 363
++++Y G++G A+ VFD + ++N V W M+ +C + + E +F+ + ER +
Sbjct: 141 IGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIV 200
Query: 364 ------SDLYAFG-------------------------TVLRACSGVAAVMLGKEVHCQY 392
S L G TVL + + + GK +H
Sbjct: 201 SWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTA 260
Query: 393 VRKGGWRDVI-VESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEV 451
G ++D I V +ALVD Y K G ++ A +F M+ RN ++WN +I G A NG+G
Sbjct: 261 ESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFG 320
Query: 452 LELFEDMIKEG-MEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMI 510
++LF+ MI+EG + P+ TF+GVL CS+TG V+ G F LM++ + ++ EHY M+
Sbjct: 321 IDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMV 380
Query: 511 DLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHL 570
DL+ R+ I EA L+N + ++W LL AC D AE A +++++EP
Sbjct: 381 DLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSG 440
Query: 571 SYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
+YVLL N+Y GRW D ++R LM+ ++K G+S I
Sbjct: 441 NYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 177/402 (44%), Gaps = 46/402 (11%)
Query: 86 LHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQ---AQTLFDSLAVRDIIAWTSLISAYT 142
+HAH L+ +H N LL ++ + L A +F + +++ + ++I Y+
Sbjct: 23 IHAHLLRHFLHGS----NLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYS 78
Query: 143 RAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTV 202
G P+ SL FS M + + +T + ++ + S L DL G C+H +I GFH
Sbjct: 79 LVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGK 138
Query: 203 ISSALVDMYGRNRAVRDALKLFDESPE------------------------------PED 232
I +V++Y + DA K+FDE E
Sbjct: 139 IRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERS 198
Query: 233 VVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELH 292
+V W ++IS+L++ REAL LF M G PD T T+L A+LG L GK +H
Sbjct: 199 IVSWNSMISSLSKCGRDREALELFCEMIDQ-GFDPDEATVVTVLPISASLGVLDTGKWIH 257
Query: 293 AKVVGLGICGN-VVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEY 351
+ G+ + + V ++L+D Y K G + A +F ++ +N VSW ++S N +
Sbjct: 258 STAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKG 317
Query: 352 E---AVFELVRERG--VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVE-S 405
E +F+ + E G + F VL CS V G+E+ + +
Sbjct: 318 EFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYG 377
Query: 406 ALVDLYAKCGCVDFAQRLFLSMEVR-NQITWNAMIGGLAQNG 446
A+VDL ++ G + A + +M V N W +++ +G
Sbjct: 378 AMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHG 419
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 164/374 (43%), Gaps = 59/374 (15%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
YA LL++C+ S G +H +++G H + ++ LY G + AQ +FD +
Sbjct: 105 YAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTS-GGRMGDAQKVFDEM 163
Query: 127 AVRD-------------------------------IIAWTSLISAYTRAGRPINSLQLFS 155
+ R+ I++W S+IS+ ++ GR +L+LF
Sbjct: 164 SERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFC 223
Query: 156 QMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRG-FHSNTVISSALVDMYGRN 214
+M+D +P+ T+ +V+ ++ L L G +H+ S G F + +ALVD Y ++
Sbjct: 224 EMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKS 283
Query: 215 RAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGT 274
+ A +F + + +VV W +IS N + LF AM + P+ TF
Sbjct: 284 GDLEAATAIFRKM-QRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLG 342
Query: 275 LLAACANLGWLRQGKELHAKVVG-LGICGNVVVESSLLDMYGKCGKVGQARVVFDRLG-D 332
+LA C+ G + +G+EL ++ + +++D+ + G++ +A + +
Sbjct: 343 VLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVN 402
Query: 333 KNSVSWTAMLSAYCQNKEYE----AVFELVR-ERGVSDLYAFGTVLRACSGVAAVMLGKE 387
N+ W ++LSA + + + A ELV+ E G S Y + L
Sbjct: 403 ANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNL-------------- 448
Query: 388 VHCQYVRKGGWRDV 401
Y +G W+DV
Sbjct: 449 ----YAEEGRWQDV 458
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 7/216 (3%)
Query: 30 STDSEILQHCKDGSLRQALHLL-NTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHA 88
S +S I K G R+AL L DP+ V+ ++L G +H+
Sbjct: 201 SWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVV--TVLPISASLGVLDTGKWIHS 258
Query: 89 HALKSGIHSDRF-VGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRP 147
A SG+ D VGN+L+ Y K G L A +F + R++++W +LIS G+
Sbjct: 259 TAESSGLFKDFITVGNALVDFYCKSGD-LEAATAIFRKMQRRNVVSWNTLISGSAVNGKG 317
Query: 148 INSLQLFSQMLDL-DMEPNAFTISSVITAASKLRDLALGACLHAMVISR-GFHSNTVISS 205
+ LF M++ + PN T V+ S + G L +++ R + T
Sbjct: 318 EFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYG 377
Query: 206 ALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIS 241
A+VD+ R+ + +A K P + W +++S
Sbjct: 378 AMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLS 413
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 193/388 (49%), Gaps = 40/388 (10%)
Query: 267 PDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGK-CGKVGQARV 325
P+ F + +L + L +H + G VVV+++LL Y + AR
Sbjct: 124 PNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQ 183
Query: 326 VFDRLGDKNSVSWTAMLSAYCQNKEYE---AVFELVRERGVSDLYAFGT----------- 371
+FD + ++N VSWTAMLS Y ++ + A+FE + ER V A
Sbjct: 184 LFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEA 243
Query: 372 ----------------------VLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVD 409
VL AC+ + L K +H R+ DV V ++LVD
Sbjct: 244 VSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVD 303
Query: 410 LYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIK---EGMEPD 466
LY KCG ++ A +F ++ WN+MI A +GR E + +FE+M+K ++PD
Sbjct: 304 LYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPD 363
Query: 467 YITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLL 526
+ITFIG+L AC+H GLV +GR YF LM + +GI+P +EHY C+IDLLGRA +EA ++
Sbjct: 364 HITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVM 423
Query: 527 ENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWN 586
+ D ++W LL AC AE + ++ L P+ ++ N+Y +G W
Sbjct: 424 STMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWE 483
Query: 587 DAMEIRKLMEDRGVKKLPGKSWIGSENQ 614
+A RK+++ + K PG S I +N+
Sbjct: 484 EARRARKMIKHQNAYKPPGWSRIEIDNE 511
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 209/477 (43%), Gaps = 58/477 (12%)
Query: 75 TKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAW 134
+K+ H + + + SG+ F+ LL +L A+ +FD + + +
Sbjct: 32 SKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLY 91
Query: 135 TSLISAYTRAGRPINS---LQLFSQMLDLDM-EPNAFTISSVITAASKLRDLALGACLHA 190
++++AY+ + P+++ F M++ + PN F V+ + L +H
Sbjct: 92 AAVLTAYS-SSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHT 150
Query: 191 MVISRGFHSNTVISSALVDMYG--------------------------------RNRAVR 218
+ GFH V+ +AL+ Y R+ +
Sbjct: 151 HLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDIS 210
Query: 219 DALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAA 278
+A+ LF++ PE DV W AI++ T+N +F EA+ LF M + P+ T +L+A
Sbjct: 211 NAVALFEDMPE-RDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSA 269
Query: 279 CANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSW 338
CA G L+ K +HA + +V V +SL+D+YGKCG + +A VF K+ +W
Sbjct: 270 CAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAW 329
Query: 339 TAMLSAYC---QNKEYEAVFELVRERGVSDL----YAFGTVLRACSGVAAVMLGKEVHCQ 391
+M++ + +++E AVFE + + ++D+ F +L AC+ V G+
Sbjct: 330 NSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDL 389
Query: 392 YVRKGGWRDVIVE-SALVDLYAKCGCVDFAQRLFLSMEVR-NQITWNAMIGGLAQNGRGT 449
+ G I L+DL + G D A + +M+++ ++ W +++ +G
Sbjct: 390 MTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGH-- 447
Query: 450 EVLELFEDMIKE--GMEPD---YITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKP 501
L+L E +K + P+ Y+ + L+ G +E RR ++ + KP
Sbjct: 448 --LDLAEVAVKNLVALNPNNGGYVAMMANLYG--EMGNWEEARRARKMIKHQNAYKP 500
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 144/321 (44%), Gaps = 37/321 (11%)
Query: 60 PNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQA 119
P +Y +L++ SS +H H KSG H V +LL Y H+ A
Sbjct: 122 PRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLA 181
Query: 120 QTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLD------------------ 161
+ LFD ++ R++++WT+++S Y R+G N++ LF M + D
Sbjct: 182 RQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFL 241
Query: 162 --------------MEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSAL 207
+ PN T+ V++A ++ L L +HA R S+ +S++L
Sbjct: 242 EAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSL 301
Query: 208 VDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHR--GCGL 265
VD+YG+ + +A +F + + + + W ++I+ + EA+ +F M + +
Sbjct: 302 VDLYGKCGNLEEASSVFKMASK-KSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDI 360
Query: 266 VPDGFTFGTLLAACANLGWLRQGKELHAKVVG-LGICGNVVVESSLLDMYGKCGKVGQAR 324
PD TF LL AC + G + +G+ + GI + L+D+ G+ G+ +A
Sbjct: 361 KPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEAL 420
Query: 325 VVFDRLGDK-NSVSWTAMLSA 344
V + K + W ++L+A
Sbjct: 421 EVMSTMKMKADEAIWGSLLNA 441
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 12/192 (6%)
Query: 319 KVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEA-----VFELVRERGVS--DLYAFGT 371
+ AR +FDR N+ + A+L+AY + A F L+ R V + + +
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPL 131
Query: 372 VLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAK-CGCVDFAQRLFLSMEVR 430
VL++ +++ VH + G V+V++AL+ YA + A++LF M R
Sbjct: 132 VLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSER 191
Query: 431 NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYF 490
N ++W AM+ G A++G + + LFEDM E D ++ +L AC+ GL E F
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMP----ERDVPSWNAILAACTQNGLFLEAVSLF 247
Query: 491 ALMVDEYGIKPG 502
M++E I+P
Sbjct: 248 RRMINEPSIRPN 259
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 204/378 (53%), Gaps = 35/378 (9%)
Query: 267 PDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVV 326
PD TF L+ A + + + G++ H+++V G +V VE+SL+ MY CG + A +
Sbjct: 115 PDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRI 174
Query: 327 FDRLGDKNSVSWTAMLSAYCQ-------------------------------NKEYEA-- 353
F ++G ++ VSWT+M++ YC+ N +E
Sbjct: 175 FGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAI 234
Query: 354 -VFELVRERGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLY 411
+FE ++ GV ++ +V+ +C+ + A+ G+ + V+ ++I+ +ALVD++
Sbjct: 235 DLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMF 294
Query: 412 AKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFI 471
+CG ++ A +F + + ++W+++I GLA +G + + F MI G P +TF
Sbjct: 295 WRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFT 354
Query: 472 GVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADC 531
VL ACSH GLV++G + M ++GI+P +EHY C++D+LGRA + EAE+ +
Sbjct: 355 AVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHV 414
Query: 532 RYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEI 591
+ + + LLGAC + AERV +I+++P+ YVLL NIY G+W+ +
Sbjct: 415 KPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESL 474
Query: 592 RKLMEDRGVKKLPGKSWI 609
R +M+++ VKK PG S I
Sbjct: 475 RDMMKEKLVKKPPGWSLI 492
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 209/455 (45%), Gaps = 51/455 (11%)
Query: 69 SLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTL------YLKLGPHLPQAQTL 122
+LLQ+C SSF +H L++ + SD FV + LL L + K L A +
Sbjct: 17 ALLQSC---SSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGI 73
Query: 123 FDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDL 182
F + ++ + LI ++ P + ++QML + P+ T +I A+S++ +
Sbjct: 74 FSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECV 133
Query: 183 ALGACLHAMVISRGFHSNTVISSALVDMYG------------------------------ 212
+G H+ ++ GF ++ + ++LV MY
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGY 193
Query: 213 -RNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFT 271
+ V +A ++FDE P ++ W+ +I+ +N+ F +A+ LF M R G+V +
Sbjct: 194 CKCGMVENAREMFDEMPH-RNLFTWSIMINGYAKNNCFEKAIDLFEFMKRE-GVVANETV 251
Query: 272 FGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLG 331
+++++CA+LG L G+ + VV + N+++ ++L+DM+ +CG + +A VF+ L
Sbjct: 252 MVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP 311
Query: 332 DKNSVSWTAMLSAYC----QNKEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKE 387
+ +S+SW++++ +K +++ + F VL ACS V G E
Sbjct: 312 ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLE 371
Query: 388 VHCQYVRKGGWRDVIVE-SALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNG 446
++ + G + +VD+ + G + A+ L M V+ + G +
Sbjct: 372 IYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIY 431
Query: 447 RGTEVLELFEDMIKEGMEPD---YITFIGVLFACS 478
+ TEV E +M+ + ++P+ Y + ++AC+
Sbjct: 432 KNTEVAERVGNMLIK-VKPEHSGYYVLLSNIYACA 465
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 156/352 (44%), Gaps = 41/352 (11%)
Query: 65 VLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFD 124
+ + L++ ++ L G H+ ++ G +D +V NSL+ +Y G + A +F
Sbjct: 118 ITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCG-FIAAAGRIFG 176
Query: 125 SLAVRDIIAWTSLISAYTRAGRPINSLQLFSQM------------------------LDL 160
+ RD+++WTS+++ Y + G N+ ++F +M +DL
Sbjct: 177 QMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDL 236
Query: 161 -------DMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGR 213
+ N + SVI++ + L L G + V+ N ++ +ALVDM+ R
Sbjct: 237 FEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWR 296
Query: 214 NRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFG 273
+ A+ +F+ PE D + W++II L + +A+ F M G +P TF
Sbjct: 297 CGDIEKAIHVFEGLPET-DSLSWSSIIKGLAVHGHAHKAMHYFSQM-ISLGFIPRDVTFT 354
Query: 274 TLLAACANLGWLRQGKELHAKV-VGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGD 332
+L+AC++ G + +G E++ + GI + ++DM G+ GK+ +A ++
Sbjct: 355 AVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHV 414
Query: 333 KNSVSWTAMLSAYCQNKEYEAVFELVRERGV------SDLYAFGTVLRACSG 378
K + L C+ + V E V + S Y + + AC+G
Sbjct: 415 KPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAG 466
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 134/295 (45%), Gaps = 46/295 (15%)
Query: 275 LLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDM------YGK-CGKVGQARVVF 327
LL +C++ L K +H ++ + +V V S LL + + K +G A +F
Sbjct: 18 LLQSCSSFSDL---KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIF 74
Query: 328 DRLGDKNSVSWTAMLSAYCQNKEYEAVF----ELVRERGVSDLYAFGTVLRACSGVAAVM 383
++ + N + ++ + E F ++++ R D F +++A S + V+
Sbjct: 75 SQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVL 134
Query: 384 LGKEVHCQYVRKGGWRDVIVESALVDLYA------------------------------- 412
+G++ H Q VR G DV VE++LV +YA
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 413 KCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIG 472
KCG V+ A+ +F M RN TW+ MI G A+N + ++LFE M +EG+ + +
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 473 VLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLE 527
V+ +C+H G ++ G R + +V + + + ++D+ R IE+A + E
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSH-MTVNLILGTALVDMFWRCGDIEKAIHVFE 308
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/335 (34%), Positives = 191/335 (57%), Gaps = 16/335 (4%)
Query: 288 GKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK-NSVSWTAMLSAYC 346
G+++HA V LG + +++SL+ Y G V AR VFD +K N V WTAM+SAY
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 347 QNKEYEAVFELVRERGVSDLYAFGTV----LRACSGVAAVMLGKEVHCQYVRKGGW--RD 400
+N+ EL + + G + L AC+ + AV +G+E++ + +++ D
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD 203
Query: 401 VIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDM-- 458
+ + ++L+++Y K G + A++LF ++ T+ +MI G A NG+ E LELF+ M
Sbjct: 204 LTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKT 263
Query: 459 IKEGME----PDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLG 514
I + + P+ +TFIGVL ACSH+GLV+EG+R+F M+ +Y +KP H+ CM+DL
Sbjct: 264 IDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFC 323
Query: 515 RAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVL 574
R+ +++A + + + +W LLGAC+ + E V R++ EL+ D YV
Sbjct: 324 RSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVA 383
Query: 575 LGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
L NIY + G W++ ++R + R ++PGKSWI
Sbjct: 384 LSNIYASKGMWDEKSKMRDRVRKR---RMPGKSWI 415
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 165/347 (47%), Gaps = 25/347 (7%)
Query: 138 ISAYTRAGRPINSLQLFSQMLDLDMEP---NAFTISSVITAASKLRDLAL-GACLHAMVI 193
+ Y +G PI +L F P ++F++ I +S + +L G +HA+V
Sbjct: 35 LKQYLESGEPIKALLDFRHRFR--QSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVR 92
Query: 194 SRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREAL 253
GF++ I ++LV Y V A ++FDE+PE +++V WTA+IS T N+ EA+
Sbjct: 93 KLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAI 152
Query: 254 RLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG--ICGNVVVESSLL 311
LF M + DG L+ACA+LG ++ G+E++++ + + ++ + +SLL
Sbjct: 153 ELFKRME-AEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLL 211
Query: 312 DMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDL----- 366
+MY K G+ +AR +FD K+ ++T+M+ Y N + + EL ++ D
Sbjct: 212 NMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTV 271
Query: 367 -----YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVE-SALVDLYAKCGCVDFA 420
F VL ACS V GK + + +VDL+ + G + A
Sbjct: 272 ITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDA 331
Query: 421 QRLFLSMEVR-NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPD 466
M ++ N + W ++G + +G +EL E++ + E D
Sbjct: 332 HEFINQMPIKPNTVIWRTLLGACSLHGN----VELGEEVQRRIFELD 374
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 159/326 (48%), Gaps = 25/326 (7%)
Query: 65 VLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFD 124
VL+A + + K SS L G +HA K G ++ + SL+ Y +G + A+ +FD
Sbjct: 67 VLFAIKVSSAQKASS-LDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGD-VDYARQVFD 124
Query: 125 SLAVR-DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLA 183
+ +I+ WT++ISAYT + +++LF +M +E + ++ ++A + L +
Sbjct: 125 ETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQ 184
Query: 184 LGACLHAMVISRG--FHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIS 241
+G +++ I R + + ++L++MY ++ A KLFDES +DV +T++I
Sbjct: 185 MGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMR-KDVTTYTSMIF 243
Query: 242 TLTRNDMFREALRLFVAMH-----RGCGLVPDGFTFGTLLAACANLGWLRQGK-ELHAKV 295
N +E+L LF M + + P+ TF +L AC++ G + +GK + +
Sbjct: 244 GYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMI 303
Query: 296 VGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK-NSVSWTAMLSAYCQNKEYE-- 352
+ + ++D++ + G + A +++ K N+V W +L A + E
Sbjct: 304 MDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELG 363
Query: 353 -----AVFELVRER-----GVSDLYA 368
+FEL R+ +S++YA
Sbjct: 364 EEVQRRIFELDRDHVGDYVALSNIYA 389
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 122/364 (33%), Positives = 201/364 (55%), Gaps = 12/364 (3%)
Query: 253 LRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLD 312
LRL + G D F TL+ A A LG L + + ++ +V V ++++
Sbjct: 101 LRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSK----RDVPVWNAMIT 156
Query: 313 MYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELV----RERGVSDLY- 367
Y + G + A +FD + KN SWT ++S + QN Y ++ +++ V +
Sbjct: 157 GYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHI 216
Query: 368 AFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRD-VIVESALVDLYAKCGCVDFAQRLFLS 426
+VL AC+ + + +G+ + Y R+ G+ D + V +A +++Y+KCG +D A+RLF
Sbjct: 217 TVVSVLPACANLGELEIGRRLE-GYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEE 275
Query: 427 M-EVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDE 485
+ RN +WN+MIG LA +G+ E L LF M++EG +PD +TF+G+L AC H G+V +
Sbjct: 276 LGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVK 335
Query: 486 GRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGAC 545
G+ F M + + I P +EHY CMIDLLGR ++EA L++ + D +W LLGAC
Sbjct: 336 GQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGAC 395
Query: 546 TKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPG 605
+ + AE + + +LEP + V++ NIY A +W+ + +RKLM+ + K G
Sbjct: 396 SFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAG 455
Query: 606 KSWI 609
S+
Sbjct: 456 YSYF 459
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 192/444 (43%), Gaps = 93/444 (20%)
Query: 86 LHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAG 145
LHAH L++G+ + + LL L P+L A+ LFD + LI AY
Sbjct: 7 LHAHCLRTGVDETKDLLQRLL-----LIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHH 61
Query: 146 RPINSLQLF-----------------------------------SQMLDLDMEPNAFTIS 170
+P S+ L+ SQ E ++F +
Sbjct: 62 QPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCT 121
Query: 171 SVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEP 230
++ITA +KL L C V + + +A++ Y R ++ A++LFD P
Sbjct: 122 TLITAYAKLGAL----CCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPR- 176
Query: 231 EDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKE 290
++V WT +IS ++N + EAL++F+ M + + P+ T ++L ACANLG L G+
Sbjct: 177 KNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRR 236
Query: 291 LHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGD-KNSVSWTAMLSAYCQNK 349
L G N+ V ++ ++MY KCG + A+ +F+ LG+ +N SW +M+ + +
Sbjct: 237 LEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHG 296
Query: 350 EYEAVF----ELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVES 405
+++ +++RE D F +L AC VH V KG
Sbjct: 297 KHDEALTLFAQMLREGEKPDAVTFVGLLLAC-----------VHGGMVVKG--------- 336
Query: 406 ALVDLYAKCGCVDFAQRLFLSMEVRNQIT-----WNAMIGGLAQNGRGTEVLELFEDMIK 460
Q LF SME ++I+ + MI L + G+ E +L + M
Sbjct: 337 ---------------QELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTM-- 379
Query: 461 EGMEPDYITFIGVLFACSHTGLVD 484
M+PD + + +L ACS G V+
Sbjct: 380 -PMKPDAVVWGTLLGACSFHGNVE 402
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 37/258 (14%)
Query: 323 ARVVFDRLGDKNSVSWTAMLSAYC---QNKEYEAVFELVRERGV-SDLYAFGTVLRACSG 378
AR +FD + + + ++ AY Q E ++ L+ G+ + F + A +
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 379 VAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAM 438
++ + +H Q+ R G D + L+ YAK G + A+R+F M R+ WNAM
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 439 I-------------------------------GGLAQNGRGTEVLELFEDMIKE-GMEPD 466
I G +QNG +E L++F M K+ ++P+
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
Query: 467 YITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLL 526
+IT + VL AC++ G ++ GRR E G + N I++ + MI+ A+ L
Sbjct: 215 HITVVSVLPACANLGELEIGRR-LEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLF 273
Query: 527 ENADCRYDHSLWAVLLGA 544
E + + W ++G+
Sbjct: 274 EELGNQRNLCSWNSMIGS 291
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 178/317 (56%), Gaps = 14/317 (4%)
Query: 299 GICG-NVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFEL 357
G+C N+++ES + K G+ G A+ V D+N ++W M+ Y +N +YE +
Sbjct: 97 GVCNINLIIESLM-----KIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKA 151
Query: 358 VRER-GVSDL----YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYA 412
++ +D+ ++F + L AC+ + + K VH + G + I+ SALVD+YA
Sbjct: 152 LKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYA 211
Query: 413 KCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIG 472
KCG + ++ +F S++ + WNAMI G A +G TE + +F +M E + PD ITF+G
Sbjct: 212 KCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLG 271
Query: 473 VLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCR 532
+L CSH GL++EG+ YF LM + I+P +EHY M+DLLGRA ++EA L+E+
Sbjct: 272 LLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIE 331
Query: 533 YDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIR 592
D +W LL + + E + + + + YVLL NIY + +W A ++R
Sbjct: 332 PDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSG---DYVLLSNIYSSTKKWESAQKVR 388
Query: 593 KLMEDRGVKKLPGKSWI 609
+LM G++K GKSW+
Sbjct: 389 ELMSKEGIRKAKGKSWL 405
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 130/264 (49%), Gaps = 21/264 (7%)
Query: 100 FVGNSLLTLYLKLGPHLPQAQTLFDSL----------------AVRDIIAWTSLISAYTR 143
++ LL +L L P + + +SL + +++I W +I Y R
Sbjct: 82 YLARRLLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVR 141
Query: 144 AGRPINSLQLFSQMLDL-DMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTV 202
+ +L+ ML D++PN F+ +S + A ++L DL +H+++I G N +
Sbjct: 142 NVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAI 201
Query: 203 ISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRG 262
+SSALVD+Y + + + ++F S + DV W A+I+ + + EA+R+F M
Sbjct: 202 LSSALVDVYAKCGDIGTSREVF-YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEME-A 259
Query: 263 CGLVPDGFTFGTLLAACANLGWLRQGKELHAKVV-GLGICGNVVVESSLLDMYGKCGKVG 321
+ PD TF LL C++ G L +GKE + I + +++D+ G+ G+V
Sbjct: 260 EHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVK 319
Query: 322 QARVVFDRLG-DKNSVSWTAMLSA 344
+A + + + + + V W ++LS+
Sbjct: 320 EAYELIESMPIEPDVVIWRSLLSS 343
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 7/244 (2%)
Query: 231 EDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKE 290
++V+ W +I RN + EAL+ M + P+ F+F + LAACA LG L K
Sbjct: 127 QNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKW 186
Query: 291 LHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN-- 348
+H+ ++ GI N ++ S+L+D+Y KCG +G +R VF + + W AM++ + +
Sbjct: 187 VHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGL 246
Query: 349 -KEYEAVF-ELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVE-S 405
E VF E+ E D F +L CS + GKE R+ + +
Sbjct: 247 ATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYG 306
Query: 406 ALVDLYAKCGCVDFAQRLFLSMEVR-NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGME 464
A+VDL + G V A L SM + + + W +++ ++ + E+ E+ + +
Sbjct: 307 AMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS-SRTYKNPELGEIAIQNLSKAKS 365
Query: 465 PDYI 468
DY+
Sbjct: 366 GDYV 369
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 54 SQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLG 113
S T + PN +AS L C + H +H+ + SGI + + ++L+ +Y K G
Sbjct: 157 SFTDIKPN--KFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCG 214
Query: 114 PHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVI 173
+ ++ +F S+ D+ W ++I+ + G ++++FS+M + P++ T ++
Sbjct: 215 D-IGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLL 273
Query: 174 TAASKLRDLALGACLHAMVISRGFHSNTVIS--SALVDMYGRNRAVRDALKLFDESPEPE 231
T S L G + +SR F + A+VD+ GR V++A +L + P
Sbjct: 274 TTCSHCGLLEEGKEYFGL-MSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEP 332
Query: 232 DVVGWTAIIST 242
DVV W +++S+
Sbjct: 333 DVVIWRSLLSS 343
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/384 (32%), Positives = 201/384 (52%), Gaps = 39/384 (10%)
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRND 247
+H +I ++ ++ L+ + + A +F++ P W +I +L+ N
Sbjct: 39 IHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFT-WNLMIRSLSVNH 97
Query: 248 MFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVE 307
REAL LF+ M D FTF ++ AC +R G ++H + G +V +
Sbjct: 98 KPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQ 157
Query: 308 SSLLDMYGKCGKVGQARVVFDRLGDK-------------------------------NSV 336
++L+D+Y KCGK R VFD++ + N V
Sbjct: 158 NTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVV 217
Query: 337 SWTAMLSAYCQNKEYEAVFELVRERGVSDL----YAFGTVLRACSGVAAVMLGKEVHCQY 392
SWTAM++AY +N+ + F+L R V D+ + +L+A + + ++ +G+ VH Y
Sbjct: 218 SWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVH-DY 276
Query: 393 VRKGGW-RDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEV 451
K G+ D + +AL+D+Y+KCG + A+++F M+ ++ TWN+MI L +G G E
Sbjct: 277 AHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEA 336
Query: 452 LELFEDMIKEG-MEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMI 510
L LFE+M +E +EPD ITF+GVL AC++TG V +G RYF M+ YGI P EH CMI
Sbjct: 337 LSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMI 396
Query: 511 DLLGRAEMIEEAESLLENADCRYD 534
LL +A +E+A +L+E+ D D
Sbjct: 397 QLLEQALEVEKASNLVESMDSDPD 420
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 143/282 (50%), Gaps = 31/282 (10%)
Query: 45 RQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNS 104
R+AL L + + +++ C +SS GT +H A+K+G +D F N+
Sbjct: 100 REALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNT 159
Query: 105 LLTLYLKLGP------------------------------HLPQAQTLFDSLAVRDIIAW 134
L+ LY K G L A+ +F+ + +R++++W
Sbjct: 160 LMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSW 219
Query: 135 TSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVIS 194
T++I+AY + RP + QLF +M D++PN FTI +++ A+++L L++G +H
Sbjct: 220 TAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHK 279
Query: 195 RGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALR 254
GF + + +AL+DMY + +++DA K+FD + + + W ++I++L + EAL
Sbjct: 280 NGFVLDCFLGTALIDMYSKCGSLQDARKVFDVM-QGKSLATWNSMITSLGVHGCGEEALS 338
Query: 255 LFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVV 296
LF M + PD TF +L+ACAN G ++ G +++
Sbjct: 339 LFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMI 380
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 132/294 (44%), Gaps = 50/294 (17%)
Query: 275 LLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKN 334
L C+N L+Q +H K++ + + ++ L+ + G+ A +VF++L +
Sbjct: 26 FLRTCSNFSQLKQ---IHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPS 82
Query: 335 SVSWTAMLSAYCQN-KEYEA----VFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVH 389
+ +W M+ + N K EA + ++ + D + F V++AC +++ LG +VH
Sbjct: 83 TFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVH 142
Query: 390 CQYVRKGGWRDVIVESALVDLYAKCG-------------------------------CVD 418
++ G + DV ++ L+DLY KCG +D
Sbjct: 143 GLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLD 202
Query: 419 FAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACS 478
A+ +F M +RN ++W AMI +N R E +LF M + ++P+ T + +L A +
Sbjct: 203 SAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAST 262
Query: 479 HTGLVDEGRRYFALMVDEYGIKPGVEHYNC-----MIDLLGRAEMIEEAESLLE 527
G + GR V +Y K G +C +ID+ + +++A + +
Sbjct: 263 QLGSLSMGR-----WVHDYAHKNGFV-LDCFLGTALIDMYSKCGSLQDARKVFD 310
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 152/511 (29%), Positives = 244/511 (47%), Gaps = 45/511 (8%)
Query: 135 TSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVIS 194
++LI + G PI +L L+ + + + + A + + LG LH+ I
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIK 74
Query: 195 RGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALR 254
G S+ ++ S+L+ MYG+ V A K+FDE PE +V W A+I N A
Sbjct: 75 FGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPE-RNVATWNAMIGGYMSNGDAVLASG 133
Query: 255 LFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV-----------VGLGIC-- 301
LF + + + T+ ++ + + +EL ++ V LG+
Sbjct: 134 LFEEI----SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVN 189
Query: 302 ----------------GNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAY 345
N V S ++ Y + G V +AR +F R+ ++ V W +++ Y
Sbjct: 190 NRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGY 249
Query: 346 CQN----KEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDV 401
QN +A F + E D ++L AC+ + +G+EVH +G +
Sbjct: 250 AQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQ 309
Query: 402 IVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKE 461
V +AL+D+YAKCG ++ A +F S+ VR+ N+MI LA +G+G E LE+F M
Sbjct: 310 FVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESL 369
Query: 462 GMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEE 521
++PD ITFI VL AC H G + EG + F+ M + +KP V+H+ C+I LLGR+ ++E
Sbjct: 370 DLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGRSGKLKE 428
Query: 522 AESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSY-----VLLG 576
A L++ + + ++ LLGAC D AE+V K+IE SY +
Sbjct: 429 AYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVM-KIIETAGSITNSYSENHLASIS 487
Query: 577 NIYRAVGRWNDAMEIRKLMEDRGVKKLPGKS 607
N+Y RW A +R ME RG++K PG S
Sbjct: 488 NLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 158/331 (47%), Gaps = 44/331 (13%)
Query: 240 ISTLTRNDMFR----EALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV 295
+S L +N + R +AL L+ + R G+ G+ L A + + GK LH++
Sbjct: 14 VSNLIKNHISRGSPIQALVLYGGIRRR-GVYFPGWVPLILRACACVVPRVVLGKLLHSES 72
Query: 296 VGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAY---------- 345
+ G+C +V+V SSL+ MYGKCG V AR VFD + ++N +W AM+ Y
Sbjct: 73 IKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLAS 132
Query: 346 --------CQN--------KEYEAVFELVRERGVSDLYAFG-TVLRACSGVAAVMLGKEV 388
C+N K Y E+ + R + + F ++A S VMLG V
Sbjct: 133 GLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWS----VMLGVYV 188
Query: 389 HC-------QYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGG 441
+ ++ ++ V S ++ Y + G V A+ +F + R+ + WN +I G
Sbjct: 189 NNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAG 248
Query: 442 LAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKP 501
AQNG + ++ F +M EG EPD +T +L AC+ +G +D GR +L ++ GI+
Sbjct: 249 YAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSL-INHRGIEL 307
Query: 502 GVEHYNCMIDLLGRAEMIEEAESLLENADCR 532
N +ID+ + +E A S+ E+ R
Sbjct: 308 NQFVSNALIDMYAKCGDLENATSVFESISVR 338
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 192/446 (43%), Gaps = 51/446 (11%)
Query: 35 ILQHCKDGSLRQALHLLN--TSQTTLDPNLKPVLYASLLQTCT-KTSSFLHGTTLHAHAL 91
I H GS QAL L + P P++ L+ C + G LH+ ++
Sbjct: 18 IKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLI----LRACACVVPRVVLGKLLHSESI 73
Query: 92 KSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSL 151
K G+ SD VG+SL+++Y K G + A+ +FD + R++ W ++I Y G + +
Sbjct: 74 KFGVCSDVMVGSSLISMYGKCGC-VVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLAS 132
Query: 152 QLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVIS-SALVDM 210
LF + + + N T +I K ++ L + F V + S ++ +
Sbjct: 133 GLFEE---ISVCRNTVTWIEMIKGYGKRIEIEKARELFERM---PFELKNVKAWSVMLGV 186
Query: 211 YGRNRAVRDALKLFDESPEPE------------------------------DVVGWTAII 240
Y NR + DA K F++ PE D+V W +I
Sbjct: 187 YVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLI 246
Query: 241 STLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGI 300
+ +N +A+ F M +G G PD T ++L+ACA G L G+E+H+ + GI
Sbjct: 247 AGYAQNGYSDDAIDAFFNM-QGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGI 305
Query: 301 CGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSA---YCQNKEYEAVFEL 357
N V ++L+DMY KCG + A VF+ + ++ +M+S + + KE +F
Sbjct: 306 ELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFST 365
Query: 358 VRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGC 416
+ + D F VL AC +M G ++ + + +V L+ L + G
Sbjct: 366 MESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGK 425
Query: 417 VDFAQRLFLSMEVR-NQITWNAMIGG 441
+ A RL M V+ N A++G
Sbjct: 426 LKEAYRLVKEMHVKPNDTVLGALLGA 451
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 145/453 (32%), Positives = 228/453 (50%), Gaps = 38/453 (8%)
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKL-----FDESPEPEDVVGWTAIIST 242
+HA ++ G H N++ L+ Y + + KL F P+ + +T
Sbjct: 27 IHAQLVINGCHDNSLFGK-LIGHYCSKPSTESSSKLAHLLVFPRFGHPDKF-----LFNT 80
Query: 243 LTRNDMFREALRLFVAMHRGCGLVP-DGFTFGTLLAACANLGW---LRQGKELHAKVVGL 298
L + +++R+F L+ + TF +L ACA LR G+ +H V L
Sbjct: 81 LLKCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKL 140
Query: 299 G-ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKE---YEAV 354
G + + ++ ++LL Y K G + AR VFD + ++ SV+W AM+ YC +K+ + A
Sbjct: 141 GFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNAR 200
Query: 355 FELVRERGVS--------DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR---DVIV 403
+V R S VL A S + +G VH Y+ K G+ DV +
Sbjct: 201 KAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVH-GYIEKLGFTPEVDVFI 259
Query: 404 ESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGM 463
+ALVD+Y+KCGC++ A +F M+V+N TW +M GLA NGRG E L M + G+
Sbjct: 260 GTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGI 319
Query: 464 EPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAE 523
+P+ ITF +L A H GLV+EG F M +G+ P +EHY C++DLLG+A I+EA
Sbjct: 320 KPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAY 379
Query: 524 SLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELE-PDFHLS------YVLLG 576
+ + D L L AC+ + V E + + ++E+E D LS YV L
Sbjct: 380 QFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALS 439
Query: 577 NIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
N+ G+W + ++RK M++R +K PG S++
Sbjct: 440 NVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 14/252 (5%)
Query: 83 GTTLHAHALKSG-IHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAY 141
G +H K G ++ +G +LL Y K G L A+ +FD + R + W ++I Y
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNG-DLRYARKVFDEMPERTSVTWNAMIGGY 188
Query: 142 TRAGRPIN-----SLQLFSQM--LDLDMEPNAFTISSVITAASKLRDLALGACLHAMVIS 194
N ++ LF + + P T+ V++A S+ L +G+ +H +
Sbjct: 189 CSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEK 248
Query: 195 RGF--HSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREA 252
GF + I +ALVDMY + + +A +F E + ++V WT++ + L N E
Sbjct: 249 LGFTPEVDVFIGTALVDMYSKCGCLNNAFSVF-ELMKVKNVFTWTSMATGLALNGRGNET 307
Query: 253 LRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV-VGLGICGNVVVESSLL 311
L M G+ P+ TF +LL+A ++G + +G EL + G+ + ++
Sbjct: 308 PNLLNRMAES-GIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIV 366
Query: 312 DMYGKCGKVGQA 323
D+ GK G++ +A
Sbjct: 367 DLLGKAGRIQEA 378
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 82/169 (48%), Gaps = 6/169 (3%)
Query: 70 LLQTCTKTSSFLHGTTLHAHALKSGI--HSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLA 127
+L ++T G+ +H + K G D F+G +L+ +Y K G L A ++F+ +
Sbjct: 226 VLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGC-LNNAFSVFELMK 284
Query: 128 VRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGAC 187
V+++ WTS+ + GR + L ++M + ++PN T +S+++A + + G
Sbjct: 285 VKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIE 344
Query: 188 LHAMVISRGFHSNTVIS--SALVDMYGRNRAVRDALKLFDESPEPEDVV 234
L + +R F VI +VD+ G+ +++A + P D +
Sbjct: 345 LFKSMKTR-FGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAI 392
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 196/384 (51%), Gaps = 42/384 (10%)
Query: 268 DGFTFGTLLAACANLGW--LRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARV 325
D FT+ LL A +N + L G LH + LG +V V+++L+ MY G + A
Sbjct: 120 DSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHK 179
Query: 326 VFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLYAFGTVLRACSGV-----A 380
VFD + ++N V+W M++ ++E + + + ++ T++ + V A
Sbjct: 180 VFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEA 239
Query: 381 AVMLGKEVHCQ------------------------------YVRKGGWR--DVIVESALV 408
++ + V C YV K G+ D+ V ++L+
Sbjct: 240 ILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLI 299
Query: 409 DLYAKCGCVDFAQRLFLSME--VRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPD 466
D YAKCGC+ A + F+ + +N ++W MI A +G G E + +F+DM + G++P+
Sbjct: 300 DAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPN 359
Query: 467 YITFIGVLFACSHTGLVDEG-RRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESL 525
+T I VL ACSH GL +E +F MV+EY I P V+HY C++D+L R +EEAE +
Sbjct: 360 RVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKI 419
Query: 526 LENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAVGRW 585
+W +LLGAC+ D AERV RK++ELE YVL+ NI+ GR+
Sbjct: 420 ALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRF 479
Query: 586 NDAMEIRKLMEDRGVKKLPGKSWI 609
DA RK M+ RGV KLPG S +
Sbjct: 480 LDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 161/338 (47%), Gaps = 42/338 (12%)
Query: 46 QALHLLNTSQTTLDPNLKPVLYASLLQTCT--KTSSFLHGTTLHAHALKSGIHSDRFVGN 103
Q LH L+ +L P Y LL+ + + S L G LH LK G S +V
Sbjct: 104 QRLHFLSDHNKSLPP-FDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQT 162
Query: 104 SLLTLYLKLGPHLPQAQTLFDSLAVRD-------------------------------II 132
+L+ +YL +G ++ A +FD + R+ ++
Sbjct: 163 ALVGMYL-VGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVV 221
Query: 133 AWTSLISAYTRAGRPINSLQLFSQMLDLD-MEPNAFTISSVITAASKLRDLALGACLHAM 191
+WT++I Y R +P ++ LFS+M+ D ++PN TI +++ A L DL + +HA
Sbjct: 222 SWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAY 281
Query: 192 VISRGF-HSNTVISSALVDMYGRNRAVRDALKLFDESPE-PEDVVGWTAIISTLTRNDMF 249
V RGF + ++++L+D Y + ++ A K F E P +++V WT +IS + M
Sbjct: 282 VGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMG 341
Query: 250 REALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQG--KELHAKVVGLGICGNVVVE 307
+EA+ +F M R GL P+ T ++L AC++ G + + + V I +V
Sbjct: 342 KEAVSMFKDMER-LGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHY 400
Query: 308 SSLLDMYGKCGKVGQA-RVVFDRLGDKNSVSWTAMLSA 344
L+DM + G++ +A ++ + ++ +V W +L A
Sbjct: 401 GCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGA 438
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 172/423 (40%), Gaps = 71/423 (16%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSG---IHSDR-----FVGNSLLTLYLKLGPHLPQ 118
+ SL+Q +H LH+H SG +H + F+ N LL Y LG
Sbjct: 39 FQSLMQKYESNLKIIH--QLHSHFTTSGFLLLHQKQNSGKLFLFNPLLRCY-SLGETPLH 95
Query: 119 AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASK 178
A L+D L +S + ++ P +S F+ + L N S ++
Sbjct: 96 AYFLYDQLQ------RLHFLSDHNKSLPPFDS---FTYLFLLKASSNPRFPSLLLGIGLH 146
Query: 179 LRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPE--------- 229
L LG F S+ + +ALV MY + DA K+FDE PE
Sbjct: 147 GLTLKLG-----------FESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVM 195
Query: 230 ---------------------PEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPD 268
VV WT II R D +EA+ LF M + P+
Sbjct: 196 ITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPN 255
Query: 269 GFTFGTLLAACANLGWLRQGKELHAKVVGLGICG-NVVVESSLLDMYGKCGKVGQARVVF 327
T +L A NLG L+ +HA V G ++ V +SL+D Y KCG + A F
Sbjct: 256 EITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFF 315
Query: 328 DRL--GDKNSVSWTAMLSAYC---QNKEYEAVFELVRERGVS-DLYAFGTVLRACS--GV 379
+ G KN VSWT M+SA+ KE ++F+ + G+ + +VL ACS G+
Sbjct: 316 IEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGL 375
Query: 380 AAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQ-ITWNAM 438
A + + DV LVD+ + G ++ A+++ L + + + + W +
Sbjct: 376 AEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRML 435
Query: 439 IGG 441
+G
Sbjct: 436 LGA 438
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 6/168 (3%)
Query: 85 TLHAHALKSG-IHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL--AVRDIIAWTSLISAY 141
++HA+ K G + D V NSL+ Y K G + A F + +++++WT++ISA+
Sbjct: 277 SVHAYVGKRGFVPCDIRVTNSLIDAYAKCGC-IQSAFKFFIEIPNGRKNLVSWTTMISAF 335
Query: 142 TRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASK--LRDLALGACLHAMVISRGFHS 199
G ++ +F M L ++PN T+ SV+ A S L + + MV
Sbjct: 336 AIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITP 395
Query: 200 NTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRND 247
+ LVDM R + +A K+ E P E V W ++ + D
Sbjct: 396 DVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYD 443
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/400 (32%), Positives = 197/400 (49%), Gaps = 43/400 (10%)
Query: 254 RLFVAMHRGCGLVPDGFTFGTLLAACA--NLGWLRQGKELHAKVVGLGICGNVVVESSLL 311
R FV M R + PD TF + ACA G L K LH + + G+ ++ ++L+
Sbjct: 101 RFFVEMRRR-SVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLI 159
Query: 312 DMYG-------------------------------KCGKVGQARVVFDRLGDKNSVSWTA 340
+Y K ++ +AR +FD + ++ VSW +
Sbjct: 160 RVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNS 219
Query: 341 MLSAYCQ-NKEYEAV--FELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKG 396
++S Y Q N EA+ F+ + G+ D A + L AC+ GK +H RK
Sbjct: 220 LISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKR 279
Query: 397 GWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFE 456
+ D + + LVD YAKCG +D A +F + TWNAMI GLA +G G ++ F
Sbjct: 280 LFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFR 339
Query: 457 DMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRA 516
M+ G++PD +TFI VL CSH+GLVDE R F M Y + ++HY CM DLLGRA
Sbjct: 340 KMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRA 399
Query: 517 EMIEEAESLLE----NADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSY 572
+IEEA ++E + R W+ LLG C + AE+ A ++ L P+ Y
Sbjct: 400 GLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVY 459
Query: 573 VLLGNIYRAVGRWNDAMEIRKLME-DRGVKKLPGKSWIGS 611
++ +Y RW + +++R++++ D+ VKK G S + S
Sbjct: 460 KVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKVLS 499
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 143/301 (47%), Gaps = 52/301 (17%)
Query: 85 TLHAHALKSGIHSDRFVGNSLLTLYLKLGP------------------------------ 114
TLH AL+ G+ SD F N+L+ +Y + P
Sbjct: 138 TLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAR 197
Query: 115 HLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVIT 174
+ +A+ LFDS+ +RD+++W SLIS Y + +++LF +M+ L ++P+ I S ++
Sbjct: 198 EIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLS 257
Query: 175 AASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVV 234
A ++ D G +H + ++ +++ LVD Y + + A+++F+ + + +
Sbjct: 258 ACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSD-KTLF 316
Query: 235 GWTAIISTLTRN-------DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQ 287
W A+I+ L + D FR+ + G+ PDG TF ++L C++ G + +
Sbjct: 317 TWNAMITGLAMHGNGELTVDYFRKMV--------SSGIKPDGVTFISVLVGCSHSGLVDE 368
Query: 288 GKELHAKVVGL-GICGNVVVESSLLDMYGKCGKVGQARVVFDRL----GDKNS-VSWTAM 341
+ L ++ L + + + D+ G+ G + +A + +++ G++ ++W+ +
Sbjct: 369 ARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGL 428
Query: 342 L 342
L
Sbjct: 429 L 429
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 123/519 (23%), Positives = 197/519 (37%), Gaps = 103/519 (19%)
Query: 70 LLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYL----KLGPH-------LPQ 118
LL+ C +T LH HA + SG S+ F NS+ L + P +
Sbjct: 10 LLKLC-RTLKHLH--QFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSY 66
Query: 119 AQTLFDSLAVRDIIAWTSLISAYT-RAGRPINSLQLFSQMLDLDMEPNAFTISSVITA-- 175
A ++F + + ++I T ++S + F +M + P+ T V A
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACA 126
Query: 176 ASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPE---- 231
A K DL L LH + G S+ + L+ +Y + AL+LFDE+P+ +
Sbjct: 127 AKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTY 186
Query: 232 --------------------------DVVGWTAIISTLTRNDMFREALRLFVAMHRGCGL 265
D+V W ++IS + + REA++LF M GL
Sbjct: 187 NVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEM-VALGL 245
Query: 266 VPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARV 325
PD + L+ACA G ++GK +H + + + + L+D Y KCG + A
Sbjct: 246 KPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAME 305
Query: 326 VFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVS----DLYAFGTVLRACSGVAA 381
+F+ DK +W AM++ + E + R+ S D F +VL CS
Sbjct: 306 IFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCS---- 361
Query: 382 VMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEV-----RNQITWN 436
G VD A+ LF M R +
Sbjct: 362 -------------------------------HSGLVDEARNLFDQMRSLYDVNREMKHYG 390
Query: 437 AMIGGLAQNGRGTEVLELFEDMIKEGMEPD-YITFIGVLFACSHTGLVD----EGRRYFA 491
M L + G E E+ E M K+G + + + G+L C G ++ R A
Sbjct: 391 CMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKA 450
Query: 492 LMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENAD 530
L ++ G+ Y M+++ AE EE + E D
Sbjct: 451 LSPEDGGV------YKVMVEMYANAERWEEVVKVREIID 483
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/420 (30%), Positives = 205/420 (48%), Gaps = 31/420 (7%)
Query: 220 ALKLFDESPEPEDVVGWTAIISTLTRNDM-------FREALRLFVAMHRGCGLVPDGFTF 272
A+++F P+P W AII + +R L+ + C + D T
Sbjct: 56 AVQIFRYIPKPL-TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRV--DALTC 112
Query: 273 GTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGD 332
L ACA +LH ++ G+ + ++ ++LLD Y K G + A +FD +
Sbjct: 113 SFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPV 172
Query: 333 KNSVSWTAMLSAYCQNKEYEAVFEL--------VRERGVSDLYAFGTVLRACSGVAAVML 384
++ SW A+++ EL +R V+ + A G ACS + V
Sbjct: 173 RDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALG----ACSHLGDVKE 228
Query: 385 GKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQI-TWNAMIGGLA 443
G+ + Y +VIV +A +D+Y+KCG VD A ++F + + TWN MI G A
Sbjct: 229 GENIFHGYSND----NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFA 284
Query: 444 QNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGV 503
+G LE+F+ + G++PD ++++ L AC H GLV+ G F M + G++ +
Sbjct: 285 VHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNM 343
Query: 504 EHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIE 563
+HY C++DLL RA + EA ++ + D LW LLGA SD AE +R++ E
Sbjct: 344 KHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKE 403
Query: 564 LEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWIGSENQKGSLSGLAN 623
+ + +VLL N+Y A GRW D +R ME + VKK+PG S+I + KG++ N
Sbjct: 404 MGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEA---KGTIHEFYN 460
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 146/342 (42%), Gaps = 40/342 (11%)
Query: 71 LQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRD 130
L+ C + LH + G+ +D + +LL Y K G L A LFD + VRD
Sbjct: 116 LKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGD-LISAYKLFDEMPVRD 174
Query: 131 IIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHA 190
+ +W +LI+ R +++L+ + ME S V A ALGAC H
Sbjct: 175 VASWNALIAGLVSGNRASEAMELYKR-----METEGIRRSEVTVVA------ALGACSHL 223
Query: 191 MVISRG---FH----SNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTL 243
+ G FH N ++S+A +DMY + V A ++F++ + VV W +I+
Sbjct: 224 GDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGF 283
Query: 244 TRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGN 303
+ AL +F + G+ PD ++ L AC + G + G + + G+ N
Sbjct: 284 AVHGEAHRALEIFDKLEDN-GIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERN 342
Query: 304 VVVESSLLDMYGKCGKVGQARVVFDRLG-DKNSVSWTAMLSA---YCQNKEYEAVFELVR 359
+ ++D+ + G++ +A + + + V W ++L A Y + E ++
Sbjct: 343 MKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIK 402
Query: 360 ERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDV 401
E GV++ F V+L Y +G W+DV
Sbjct: 403 EMGVNNDGDF------------VLLSN----VYAAQGRWKDV 428
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 135/522 (25%), Positives = 244/522 (46%), Gaps = 56/522 (10%)
Query: 129 RDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACL 188
D +W L+ ++ + ++ ++ M + + P++ ++SV+ A K+ ++ G +
Sbjct: 67 HDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPI 126
Query: 189 HAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDM 248
HA + G + + LV +Y R + A K FD+ E ++ V W +++ +
Sbjct: 127 HAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAE-KNTVSWNSLLHGYLESGE 185
Query: 249 FREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVES 308
EA R+F + D ++ ++++ A G + L + + + +
Sbjct: 186 LDEARRVFDKIPE-----KDAVSWNLIISSYAKKGDMGNACSLFSAMP----LKSPASWN 236
Query: 309 SLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVR--------- 359
L+ Y C ++ AR FD + KN VSW M+S Y + + ++ EL R
Sbjct: 237 ILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLV 296
Query: 360 -------------------------ERGV---SDLYAFGTVLRACSGVAAVMLGKEVHCQ 391
ER D +V+ A S + G V
Sbjct: 297 YDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESY 356
Query: 392 YVRKGGWRDVIVESALVDLYAKCGCVDFAQ--RLFLSMEVRNQITWNAMIGGLAQNGRGT 449
G D ++ ++L+DLY K G DFA+ ++F ++ ++ ++++AMI G NG T
Sbjct: 357 ITEHGIKIDDLLSTSLIDLYMKGG--DFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMAT 414
Query: 450 EVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCM 509
E LF MI++ + P+ +TF G+L A SH+GLV EG + F M D + ++P +HY M
Sbjct: 415 EANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIM 473
Query: 510 IDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELE--PD 567
+D+LGRA +EEA L+++ + + +W LL A ++ E ++LE P
Sbjct: 474 VDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPT 533
Query: 568 FHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKSWI 609
+LS+ L IY +VGRW+DA +R ++++ + K G SW+
Sbjct: 534 GYLSH--LAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWV 573
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 198/424 (46%), Gaps = 53/424 (12%)
Query: 69 SLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAV 128
S+L+ C K + + G +HA ALK+G+ +V L+ LY +LG ++ A+ FD +A
Sbjct: 109 SVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLG-YIELAKKAFDDIAE 167
Query: 129 RDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACL 188
++ ++W SL+ Y +G + ++F ++ E +A + + +I++ +K D+ L
Sbjct: 168 KNTVSWNSLLHGYLESGELDEARRVFDKI----PEKDAVSWNLIISSYAKKGDMGNACSL 223
Query: 189 HA----------------------MVISRGF-----HSNTVISSALVDMYGRNRAVRDAL 221
+ M ++R + N V ++ Y + V+ A
Sbjct: 224 FSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAE 283
Query: 222 KLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAM-HRGCGLVPDGFTFGTLLAACA 280
+LF + + +V + A+I+ T+N ++AL+LF M R + PD T ++++A +
Sbjct: 284 ELFRLMSKKDKLV-YDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANS 342
Query: 281 NLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTA 340
LG G + + + GI + ++ +SL+D+Y K G +A +F L K++VS++A
Sbjct: 343 QLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSA 402
Query: 341 MLSAYCQN---KEYEAVFELVRERGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKG 396
M+ N E ++F + E+ + ++ F +L A S V G Y
Sbjct: 403 MIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEG------YKCFN 456
Query: 397 GWRDVIVESA------LVDLYAKCGCVDFAQRLFLSMEVR-NQITWNAMI--GGLAQNGR 447
+D +E + +VD+ + G ++ A L SM ++ N W A++ GL N
Sbjct: 457 SMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVE 516
Query: 448 GTEV 451
E+
Sbjct: 517 FGEI 520
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 200/412 (48%), Gaps = 44/412 (10%)
Query: 237 TAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLL-AACANLGWLRQGKELHAKV 295
T I S LT + ++ +L LF M + P+ TF +L+ AAC++ + G LH +
Sbjct: 56 TLIRSYLTTGE-YKTSLALFTHM-LASHVQPNNLTFPSLIKAACSSFS-VSYGVALHGQA 112
Query: 296 VGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVF 355
+ G + V++S + YG+ G + +R +FD + + V+ ++L A +N E + F
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 356 ELVRERGVSD--------------------LYAFG------------------TVLRACS 377
E + V+D L FG +VL +C+
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 378 GV--AAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITW 435
+ LGK++H + K + +AL+D+Y K G ++ A +F + + W
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 436 NAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVD 495
NA+I LA NGR + LE+FE M + P+ IT + +L AC+ + LVD G + F+ +
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 496 EYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAE 555
EY I P EHY C++DL+GRA ++ +A + +++ D S+ LLGAC +
Sbjct: 353 EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGN 412
Query: 556 RVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVKKLPGKS 607
V +++I L+P YV L W++A ++RK M + G++K+P S
Sbjct: 413 TVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 135/293 (46%), Gaps = 38/293 (12%)
Query: 134 WTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVI 193
+ +LI +Y G SL LF+ ML ++PN T S+I AA ++ G LH +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 194 SRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEP----------------------- 230
RGF + + ++ V YG + + K+FD+ P
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 231 -------EDVVGWTAIISTLTRNDMFREALRLFVAM--HRGCGLVPDGFTFGTLLAACAN 281
DVV WT +I+ ++ + +AL +F M + + P+ TF ++L++CAN
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 282 L--GWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWT 339
G +R GK++H V+ I + ++LLDMYGK G + A +FD++ DK +W
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 340 AMLSAYCQNKEYEAVFELVRERGVSDLYAFG----TVLRACSGVAAVMLGKEV 388
A++SA N + E+ S ++ G +L AC+ V LG ++
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQL 346
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 134/479 (27%), Positives = 217/479 (45%), Gaps = 107/479 (22%)
Query: 83 GTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYT 142
G A K G D +V N ++ +Y+K + A+ +FD ++ R W +IS Y
Sbjct: 120 GILFQALVEKLGFFKDPYVRNVIMDMYVK-HESVESARKVFDQISQRKGSDWNVMISGYW 178
Query: 143 RAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTV 202
+ G + +LF M E + + + +IT +K++DL
Sbjct: 179 KWGNKEEACKLFDMM----PENDVVSWTVMITGFAKVKDL-------------------- 214
Query: 203 ISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRG 262
+A K FD PE + VV W A++S +N +ALRLF M R
Sbjct: 215 ---------------ENARKYFDRMPE-KSVVSWNAMLSGYAQNGFTEDALRLFNDMLR- 257
Query: 263 CGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGL----GICGNVVVESSLLDMYGKCG 318
G+ P+ T+ +++AC+ R L +V L + N V+++LLDM+ KC
Sbjct: 258 LGVRPNETTWVIVISACS----FRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCR 313
Query: 319 KVGQARVVFDRLG-DKNSVSWTAMLSAYCQNKEYEA---VFELVRERGV----------- 363
+ AR +F+ LG +N V+W AM+S Y + + + +F+ + +R V
Sbjct: 314 DIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYA 373
Query: 364 ------------SDLYAFG----------TVLRACSGVAAVMLGKEVHCQYVRKG----- 396
D+ +G +VL AC +A + LG + Y+RK
Sbjct: 374 HNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCI-VDYIRKNQIKLN 432
Query: 397 --GWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLEL 454
G+R +L+ +YA+ G + A+R+F M+ R+ +++N + A NG G E L L
Sbjct: 433 DSGYR------SLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNL 486
Query: 455 FEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLL 513
M EG+EPD +T+ VL AC+ GL+ EG+R F + + P +HY CM DLL
Sbjct: 487 LSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM-DLL 539
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 117/499 (23%), Positives = 191/499 (38%), Gaps = 105/499 (21%)
Query: 168 TISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDES 227
T+S A+ L L +++ + +S ++ R RA +L +S
Sbjct: 6 TVSLAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDS 65
Query: 228 PEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWL-- 285
+V ++ ++ DM + LRL+ R CG++PD F+F ++ + G L
Sbjct: 66 VTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSR-CGIMPDAFSFPVVIKSAGRFGILFQ 124
Query: 286 ----------------------------------------RQGKELHAKVVGLGICGNVV 305
R+G + + + G GN
Sbjct: 125 ALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKE 184
Query: 306 VESSLLDM---------------YGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKE 350
L DM + K + AR FDR+ +K+ VSW AMLS Y QN
Sbjct: 185 EACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGF 244
Query: 351 YEAVFELVRER---GV-SDLYAFGTVLRACS------------------------GVAAV 382
E L + GV + + V+ ACS V
Sbjct: 245 TEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTA 304
Query: 383 MLGKEVHCQYVRK--------GGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQIT 434
+L C+ ++ G R+++ +A++ Y + G + A++LF +M RN ++
Sbjct: 305 LLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVS 364
Query: 435 WNAMIGGLAQNGRGTEVLELFEDMIKEG-MEPDYITFIGVLFACSHTGLVDEGRRYFALM 493
WN++I G A NG+ +E FEDMI G +PD +T I VL AC H ++ G +
Sbjct: 365 WNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELG----DCI 420
Query: 494 VD---EYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSD 550
VD + IK Y +I + R + EA+ + + R D + L A D
Sbjct: 421 VDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER-DVVSYNTLFTAFAANGD 479
Query: 551 YVTAERVARKMIE--LEPD 567
V + KM + +EPD
Sbjct: 480 GVETLNLLSKMKDEGIEPD 498
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Query: 30 STDSEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAH 89
S +S I + +G A+ D V S+L C + G + +
Sbjct: 364 SWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDY 423
Query: 90 ALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPIN 149
K+ I + SL+ +Y + G +L +A+ +FD + RD++++ +L +A+ G +
Sbjct: 424 IRKNQIKLNDSGYRSLIFMYAR-GGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVE 482
Query: 150 SLQLFSQMLDLDMEPNAFTISSVITAASK 178
+L L S+M D +EP+ T +SV+TA ++
Sbjct: 483 TLNLLSKMKDEGIEPDRVTYTSVLTACNR 511
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/527 (22%), Positives = 237/527 (44%), Gaps = 35/527 (6%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLP-QAQTLFDS 125
Y +L+ C + S + +G D+ N+LL +Y K H P +A + +
Sbjct: 282 YNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK--SHRPKEAMKVLNE 339
Query: 126 LAVR----DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRD 181
+ + I+ + SLISAY R G +++L +QM + +P+ FT +++++ +
Sbjct: 340 MVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK 399
Query: 182 LALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDE------SPEPEDVVG 235
+ + + + G N +A + MYG + +K+FDE SP D+V
Sbjct: 400 VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP---DIVT 456
Query: 236 WTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV 295
W +++ +N M E +F M R G VP+ TF TL++A + G Q ++ ++
Sbjct: 457 WNTLLAVFGQNGMDSEVSGVFKEMKRA-GFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 296 VGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGD----KNSVSWTAMLSAYCQNKEY 351
+ G+ ++ +++L + G Q+ V + D N +++ ++L AY KE
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Query: 352 EAVFELVRE--RGVSDLYA--FGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESAL 407
+ L E GV + A T++ CS + + + +G D+ +++
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSM 635
Query: 408 VDLYAKCGCVDFAQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGM 463
V +Y + V A + M+ R + T+N+++ +++ + E+ +++ +G+
Sbjct: 636 VSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGI 695
Query: 464 EPDYITFIGVLFA-CSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEA 522
+PD I++ V++A C +T + D R F+ M + GI P V YN I M EEA
Sbjct: 696 KPDIISYNTVIYAYCRNTRMRD-ASRIFSEMRNS-GIVPDVITYNTFIGSYAADSMFEEA 753
Query: 523 ESLLE---NADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEP 566
++ CR + + + ++ K + A+ + L+P
Sbjct: 754 IGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDP 800
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 174/398 (43%), Gaps = 55/398 (13%)
Query: 200 NTVISSALVDMYGRNRAVRDALKLFD---ESPEPEDVVGWTAIISTLTRNDMFREALRLF 256
N+V++ ++ M G+ V A +F+ E DV +T++IS + +REA+ +F
Sbjct: 173 NSVVA-IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 257 VAMHR-GC----------------------------------GLVPDGFTFGTLLAACAN 281
M GC G+ PD +T+ TL+ C
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 282 LGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRL----GDKNSVS 337
++ ++ ++ G + V ++LLD+YGK + +A V + + + V+
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT 351
Query: 338 WTAMLSAYCQNKEYEAVFEL---VRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYV 393
+ +++SAY ++ + EL + E+G D++ + T+L V + +
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 394 RKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEV----RNQITWNAMIGGLAQNGRGT 449
G ++ +A + +Y G ++F + V + +TWN ++ QNG +
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 450 EVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCM 509
EV +F++M + G P+ TF ++ A S G ++ + M+D G+ P + YN +
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA-GVTPDLSTYNTV 530
Query: 510 IDLLGRAEMIEEAESLL---ENADCRYDHSLWAVLLGA 544
+ L R M E++E +L E+ C+ + + LL A
Sbjct: 531 LAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 400 DVIVESALVDLYAKCGCVDFAQRLF-------LSMEVRNQITWNAMIGGLAQNGRGTEVL 452
D V + ++ + K G V A +F S++V ++ ++I A +GR E +
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDV---YSYTSLISAFANSGRYREAV 228
Query: 453 ELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDL 512
+F+ M ++G +P IT+ +L G + GI P YN +I
Sbjct: 229 NVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITC 288
Query: 513 LGRAEMIEEAESLLEN---ADCRYDHSLWAVLLGACTKCSDYVTAERVARKMI--ELEPD 567
R + +EA + E A YD + LL K A +V +M+ P
Sbjct: 289 CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPS 348
Query: 568 FHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
++Y L + Y G ++AME++ M ++G K
Sbjct: 349 I-VTYNSLISAYARDGMLDEAMELKNQMAEKGTK 381
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 200/413 (48%), Gaps = 17/413 (4%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
DI+ +SL++ Y + R +++ L QM+++ +P+ FT +++I + L
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPE---DVVGWTAIISTLTRN 246
++ RG + V +V+ + + AL L + + + DVV + II L +
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY 271
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
+AL LF M G+ PD FT+ +L++ N G L + ++ I NVV
Sbjct: 272 KHMDDALNLFTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 307 ESSLLDMYGKCGKVGQARVVFD----RLGDKNSVSWTAMLSAYCQNK---EYEAVFEL-V 358
S+L+D + K GK+ +A ++D R D + +++++++ +C + E + +FEL +
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 359 RERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
+ ++ + T+++ V G E+ + ++G + + + L+ + + D
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 419 FAQRLFLSMEV----RNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVL 474
AQ +F M N +T+N ++ GL +NG+ + + +FE + + MEPD T+ ++
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Query: 475 FACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLE 527
G V++G F + + G+ P V YN MI R EEA+SLL+
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 173/373 (46%), Gaps = 21/373 (5%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
D++ + ++I + ++L LF++M + + P+ FT SS+I+ + + L
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDE----SPEPEDVVGWTAIISTLTR 245
+ +I R + N V SAL+D + + + +A KL+DE S +P D+ ++++I+
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP-DIFTYSSLINGFCM 375
Query: 246 NDMFREALRLFVAM-HRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNV 304
+D EA +F M + C P+ T+ TL+ + +G EL ++ G+ GN
Sbjct: 376 HDRLDEAKHMFELMISKDC--FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 305 VVESSLLDMYGKCGKVGQARVVFDRLGD----KNSVSWTAMLSAYCQNKEYE---AVFE- 356
V ++L+ + + A++VF ++ N +++ +L C+N + VFE
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 357 LVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGC 416
L R D+Y + ++ V G E+ C KG +VI + ++ + + G
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Query: 417 VDFAQRLFLSME----VRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIG 472
+ A L M+ + N T+N +I ++G EL ++M G D T IG
Sbjct: 554 KEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST-IG 612
Query: 473 VLFACSHTGLVDE 485
++ H G +D+
Sbjct: 613 LVTNMLHDGRLDK 625
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 187/446 (41%), Gaps = 67/446 (15%)
Query: 213 RNR-----AVRDALKLFDE----SPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGC 263
RNR V DA+ LF + P P +V + ++S + + + F + L M
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPFPS-IVEFNKLLSAVAKMNKFELVISLGEQMQT-L 112
Query: 264 GLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQA 323
G+ D +T+ + L + AK++ LG ++V SSLL+ Y ++ A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 324 RVVFDRLGD----KNSVSWTAMLSA-YCQNKEYEAVF---ELVRERGVSDLYAFGTVL-- 373
+ D++ + ++ ++T ++ + NK EAV ++V+ DL +GTV+
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 374 ---RACSGVAAVMLGK-----------------EVHCQYV-------------RKGGWRD 400
R +A +L K + C+Y KG D
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 401 VIVESALVDLYAKCGCVDFAQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFE 456
V S+L+ G A RL M R N +T++A+I + G+ E +L++
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 457 DMIKEGMEPDYITFIGVLFA-CSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGR 515
+MIK ++PD T+ ++ C H L DE + F LM+ + P V Y+ +I +
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRL-DEAKHMFELMISK-DCFPNVVTYSTLIKGFCK 410
Query: 516 AEMIEEAESLLENADCR---YDHSLWAVLLGACTKCSDYVTAERVARKMIE--LEPDFHL 570
A+ +EE L R + + L+ + D A+ V ++M+ + P+
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 571 SYVLLGNIYRAVGRWNDAMEIRKLME 596
+LL + + G+ AM + + ++
Sbjct: 471 YNILLDGLCKN-GKLAKAMVVFEYLQ 495
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 203/431 (47%), Gaps = 17/431 (3%)
Query: 110 LKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTI 169
+KL + + S I+ + L+SA + + + L +M L + + +T
Sbjct: 64 IKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123
Query: 170 SSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPE 229
+ VI ++L + ++ G+ + V +LV+ + R V DA+ L D+ E
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 230 ---PEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLR 286
D+V + AII +L + +A F + R G+ P+ T+ L+ N
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK-GIRPNVVTYTALVNGLCNSSRWS 242
Query: 287 QGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLG----DKNSVSWTAML 342
L + ++ I NV+ S+LLD + K GKV +A+ +F+ + D + V++++++
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 343 SAYCQNK---EYEAVFELVRERG-VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGW 398
+ C + E +F+L+ +G ++D+ ++ T++ V G ++ + ++G
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 399 RDVIVESALVDLYAKCGCVDFAQRLFLSME---VRNQI-TWNAMIGGLAQNGRGTEVLEL 454
+ + + L+ + + G VD AQ F M+ + I T+N ++GGL NG + L +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 455 FEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLG 514
FEDM K M+ D +T+ V+ TG V+E F + + G+KP + Y M+ L
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK-GLKPDIVTYTTMMSGLC 481
Query: 515 RAEMIEEAESL 525
++ E E+L
Sbjct: 482 TKGLLHEVEAL 492
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 158/374 (42%), Gaps = 20/374 (5%)
Query: 242 TLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGIC 301
T R+ +A+ LF M + P F LL+A L L K+ LGI
Sbjct: 59 TRLRDIKLNDAIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIR 117
Query: 302 GNVVVESSLLDMYGKCGKVGQARVVFDRL----GDKNSVSWTAMLSAYCQNKEYEAVFEL 357
++ + +++ + C +V A + ++ + + V+ ++++ +C+ L
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 358 VR---ERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAK 413
V E G D+ A+ ++ + V + + RKG +V+ +ALV+
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 414 CGCVDFAQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYIT 469
A RL M + N IT++A++ +NG+ E ELFE+M++ ++PD +T
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 470 FIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENA 529
+ ++ +DE + F LMV + G V YN +I+ +A+ +E+ L
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSK-GCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Query: 530 DCR---YDHSLWAVLLGACTKCSDYVTAERVARKM--IELEPDFHLSYVLLGNIYRAVGR 584
R + + L+ + D A+ +M + PD +LLG + G
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN-GE 415
Query: 585 WNDAMEIRKLMEDR 598
A+ I + M+ R
Sbjct: 416 LEKALVIFEDMQKR 429
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 167/364 (45%), Gaps = 50/364 (13%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
+ +L+ C F G +H +KSG+ +D FV N+L+ +Y + G + A+ + D +
Sbjct: 143 FTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSG-YFEIARKVLDRM 201
Query: 127 AVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGA 186
VRD ++W SL+SAY G + LF +M + ++E F IS
Sbjct: 202 PVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISG--------------- 246
Query: 187 CLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
Y V++A ++FD P DVV W A+++
Sbjct: 247 ------------------------YAAAGLVKEAKEVFDSMP-VRDVVSWNAMVTAYAHV 281
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
+ E L +F M PDGFT ++L+ACA+LG L QG+ +H + GI +
Sbjct: 282 GCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFL 341
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAM---LSAYCQNKEYEAVF-ELVRERG 362
++L+DMY KCGK+ +A VF ++ +W ++ LS + K+ +F E+V E
Sbjct: 342 ATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGF 401
Query: 363 VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR-DVIVE--SALVDLYAKCGCVDF 419
+ F VL AC+ V ML + + +R + +E +VDL + G ++
Sbjct: 402 KPNGITFIGVLSACNHVG--MLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEE 459
Query: 420 AQRL 423
A+ L
Sbjct: 460 AEEL 463
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/577 (21%), Positives = 247/577 (42%), Gaps = 46/577 (7%)
Query: 28 ASSTDSEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLH 87
A + S I +C++ ++RQ LL + + P Y ++++ + +
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELL-VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 88 AHALKSGIHSDRFVGNSLLTLYL---KLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRA 144
+ SG + + +L+ +L + G + + + + DI + SLI ++A
Sbjct: 441 KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKA 500
Query: 145 GRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVIS 204
R + +M++ ++PNAFT + I+ + + A + G N V+
Sbjct: 501 KRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC 560
Query: 205 SALVDMYGRNRAVRDALKLFDESPEPEDVVG----WTAIISTLTRNDMFREALRLFVAMH 260
+ L++ Y + V +A + S + ++G +T +++ L +ND +A +F M
Sbjct: 561 TGLINEYCKKGKVIEACSAY-RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM- 618
Query: 261 RGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKV 320
RG G+ PD F++G L+ + LG +++ + ++V G+ NV++ + LL + + G++
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678
Query: 321 GQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYEAVFELVRE---RG-VSDLYAFGTV 372
+A+ + D + K N+V++ ++ YC++ + F L E +G V D + + T+
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738
Query: 373 LRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRL--------F 424
+ C + V + +KG +AL++ K G + + F
Sbjct: 739 VDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSF 797
Query: 425 LSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVD 484
N +T+N MI L + G ELF M + P IT+ +L G
Sbjct: 798 DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL-----NGYDK 852
Query: 485 EGRRYFALMVDEYGIKPGVE----HYNCMIDLLGRAEMIEEAESLLE--------NADCR 532
GRR V + I G+E Y+ +I+ + M +A L++ + C+
Sbjct: 853 MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCK 912
Query: 533 YDHSLWAVLLGACTKCSDYVTAERVARKMIELE--PD 567
S LL K + AE+V M+ L+ PD
Sbjct: 913 LSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/456 (21%), Positives = 183/456 (40%), Gaps = 39/456 (8%)
Query: 50 LLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLY 109
L+ + L PN Y + + + S F + G+ ++ + L+ Y
Sbjct: 510 LVEMVENGLKPN--AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 110 LKLGPHLPQA---QTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNA 166
K G + +++ D + D +T L++ + + ++ ++F +M + P+
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 167 FTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDE 226
F+ +I SKL ++ + + ++ G N +I + L+ + R+ + A +L DE
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 227 SPEP---EDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLG 283
+ V + II ++ EA RLF M GLVPD F + TL+ C L
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK-GLVPDSFVYTTLVDGCCRLN 746
Query: 284 WLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVV--------FDRLGDKNS 335
+ + + G + ++L++ K GK V FDR G N
Sbjct: 747 DVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805
Query: 336 VSWTAMLSAYCQNKEYEAVFELVRERGVSDLYAFGTVLRACS--------GVAAVMLGKE 387
V++ M+ C+ EA EL + ++L TV+ S G A M
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMP--TVITYTSLLNGYDKMGRRAEMF--P 861
Query: 388 VHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQI---------TWNAM 438
V + + G D I+ S +++ + K G A L M +N + T A+
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921
Query: 439 IGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVL 474
+ G A+ G ++ E+M++ PD T I ++
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 213/475 (44%), Gaps = 25/475 (5%)
Query: 71 LQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQA---QTLFDSLA 127
L+ +T G + + G D +L+ + +LG A + L S A
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 128 VRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGAC 187
V D+I + +IS Y +AG N+L + +M + P+ T ++++ + L
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPE---PEDVVGWTAIISTLT 244
+ ++ R + + + + L++ R+ V A+KL DE + DVV + +++ +
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 245 RNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNV 304
+ EA++ M G P+ T +L + + G ++L A ++ G +V
Sbjct: 286 KEGRLDEAIKFLNDMPSS-GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 305 VVESSLLDMYGKCGKVGQARVVFDRLG----DKNSVSWTAMLSAYCQNKEYEAVFELVRE 360
V + L++ + G +G+A + +++ NS+S+ +L +C+ K+ + E + E
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL-E 403
Query: 361 RGVS-----DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCG 415
R VS D+ + T+L A V E+ Q KG +I + ++D AK G
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 416 CVDFAQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFI 471
A +L M + + IT+++++GGL++ G+ E ++ F + + G+ P+ +TF
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFN 523
Query: 472 GVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLL 526
++ + D + M++ G KP Y +I+ L M +EA LL
Sbjct: 524 SIMLGLCKSRQTDRAIDFLVFMINR-GCKPNETSYTILIEGLAYEGMAKEALELL 577
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 146/331 (44%), Gaps = 16/331 (4%)
Query: 283 GWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSV----SW 338
G L +G + +V G +++ ++L+ + + GK +A + + L +V ++
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175
Query: 339 TAMLSAYCQNKEYEAVFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGG 397
M+S YC+ E ++ VS D+ + T+LR+ + EV + +++
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235
Query: 398 WRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLE 453
+ DVI + L++ + V A +L M R + +T+N ++ G+ + GR E ++
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 454 LFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLL 513
DM G +P+ IT +L + TG + + A M+ + G P V +N +I+ L
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK-GFSPSVVTFNILINFL 354
Query: 514 GRAEMIEEAESLLENAD---CRYDHSLWAVLLGACTKCSDYVTAERVARKMIE--LEPDF 568
R ++ A +LE C+ + + LL K A +M+ PD
Sbjct: 355 CRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414
Query: 569 HLSYVLLGNIYRAVGRWNDAMEIRKLMEDRG 599
+L + + G+ DA+EI + +G
Sbjct: 415 VTYNTMLTALCKD-GKVEDAVEILNQLSSKG 444
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/438 (18%), Positives = 174/438 (39%), Gaps = 46/438 (10%)
Query: 38 HCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHS 97
+CK G + AL +L+ + ++ P++ V Y ++L++ + + L+ +
Sbjct: 182 YCKAGEINNALSVLD--RMSVSPDV--VTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 98 DRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVR----DIIAWTSLISAYTRAGRPINSLQL 153
D L+ + + A L D + R D++ + L++ + GR +++
Sbjct: 238 DVITYTILIEATCR-DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 154 FSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGR 213
+ M +PN T + ++ + L A ++ +GF + V + L++ R
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 214 NRAVRDALKLFDESPE---PEDVVGWTAIISTLTRNDMFREALRLFVAM-HRGCGLVPDG 269
+ A+ + ++ P+ + + + ++ + A+ M RGC PD
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC--YPDI 414
Query: 270 FTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDR 329
T+ T+L A G + E+ ++ G ++ ++++D K GK G+A + D
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474
Query: 330 LGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVH 389
+ K+ T S+ V L RE V + F H
Sbjct: 475 MRAKDLKPDTITYSSL--------VGGLSREGKVDEAIKF------------------FH 508
Query: 390 CQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR----NQITWNAMIGGLAQN 445
++ R G + + ++++ K D A + M R N+ ++ +I GLA
Sbjct: 509 -EFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYE 567
Query: 446 GRGTEVLELFEDMIKEGM 463
G E LEL ++ +G+
Sbjct: 568 GMAKEALELLNELCNKGL 585
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 149/320 (46%), Gaps = 19/320 (5%)
Query: 66 LYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDS 125
+Y+ L + + + L H +KS I N LL +++ G L + +FD
Sbjct: 90 IYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCG-RLDITRQMFDR 148
Query: 126 LAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISS-----VITAASKLR 180
+ RD +W + G ++ LF ML + AF I S V+ A + +R
Sbjct: 149 MPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLK-HSQKGAFKIPSWILGCVLKACAMIR 207
Query: 181 DLALGACLHAMVISRGF--HSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTA 238
D LG +HA+ GF ++ +S +L+ YG R + DA L + V W A
Sbjct: 208 DFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDA-NLVLHQLSNANTVAWAA 266
Query: 239 IISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWL----RQGKELHAK 294
++ R F+E +R F+ M G+ + F +L AC+ W+ R G+++HA
Sbjct: 267 KVTNDYREGEFQEVIRDFIEMGNH-GIKKNVSVFSNVLKACS---WVSDGGRSGQQVHAN 322
Query: 295 VVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVS-WTAMLSAYCQNKEYEA 353
+ LG + ++ L++MYGK GKV A VF D+ SVS W AM+++Y QN Y
Sbjct: 323 AIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIE 382
Query: 354 VFELVRERGVSDLYAFGTVL 373
+L+ + + + A T+L
Sbjct: 383 AIKLLYQMKATGIKAHDTLL 402
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 121/255 (47%), Gaps = 14/255 (5%)
Query: 222 KLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAM----HRGCGLVPDGFTFGTLLA 277
++FD P D W + + +A LFV+M +G +P + G +L
Sbjct: 144 QMFDRMPH-RDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIP-SWILGCVLK 201
Query: 278 ACANLGWLRQGKELHAKVVGLGICG--NVVVESSLLDMYGKCGKVGQARVVFDRLGDKNS 335
ACA + GK++HA LG + + SL+ YG+ + A +V +L + N+
Sbjct: 202 ACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANT 261
Query: 336 VSWTAMLSAYCQNKEYEAVFELVRERG----VSDLYAFGTVLRACSGVA-AVMLGKEVHC 390
V+W A ++ + E++ V E G ++ F VL+ACS V+ G++VH
Sbjct: 262 VAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHA 321
Query: 391 QYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQIT-WNAMIGGLAQNGRGT 449
++ G D ++ L+++Y K G V A+++F S + ++ WNAM+ QNG
Sbjct: 322 NAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYI 381
Query: 450 EVLELFEDMIKEGME 464
E ++L M G++
Sbjct: 382 EAIKLLYQMKATGIK 396
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 127/291 (43%), Gaps = 20/291 (6%)
Query: 286 RQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAY 345
R EL ++ I + + LL M+ CG++ R +FDR+ ++ SW +
Sbjct: 105 RGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGC 164
Query: 346 CQNKEYE-AVFELVRERGVSDLYAF-------GTVLRACSGVAAVMLGKEVH--CQYVRK 395
+ +YE A F V S AF G VL+AC+ + LGK+VH C +
Sbjct: 165 IEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGF 224
Query: 396 GGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELF 455
D + +L+ Y + C++ A + + N + W A + + G EV+ F
Sbjct: 225 IDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDF 284
Query: 456 EDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNC-----MI 510
+M G++ + F VL ACS D GR V IK G E +C +I
Sbjct: 285 IEMGNHGIKKNVSVFSNVLKACSWVS--DGGRS--GQQVHANAIKLGFES-DCLIRCRLI 339
Query: 511 DLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKM 561
++ G+ +++AE + +++ S W ++ + + Y+ A ++ +M
Sbjct: 340 EMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQM 390
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 193/412 (46%), Gaps = 17/412 (4%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
DI+ +SL++ Y R ++ L QM ++ +PN T +++I + L
Sbjct: 149 DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALI 208
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPE---DVVGWTAIISTLTRN 246
+++RG + +V+ + + AL L + + + DVV +T II L
Sbjct: 209 DRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNY 268
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
+AL LF M G+ P+ T+ +L+ N G L + ++ I NVV
Sbjct: 269 KNVNDALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 327
Query: 307 ESSLLDMYGKCGKVGQARVVFD----RLGDKNSVSWTAMLSAYCQNK---EYEAVFEL-V 358
S+L+D + K GK+ +A ++D R D + +++++++ +C + E + +FEL +
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 359 RERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
+ ++ + T+++ V G E+ + ++G + + + L+ + G D
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 419 FAQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVL 474
AQ++F M + IT++ ++ GL + G+ + L +FE + K MEPD T+ ++
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 475 FACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLL 526
G V++G F + + G+KP V Y MI R + EEA++L
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCRKGLKEEADALF 558
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 112/484 (23%), Positives = 210/484 (43%), Gaps = 29/484 (5%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
Y L+ + S + +K G D +SLL Y G + +A L D +
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCH-GKRISEAVALVDQM 176
Query: 127 AVRD----IIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDL 182
V + + + +LI + ++ L +M+ +P+ FT +V+ K D+
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 183 ALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEP---EDVVGWTAI 239
L L + ++ VI + ++D + V DAL LF E +VV + ++
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG 299
I L + +A RL M + P+ TF L+ A G L + ++L+ +++
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 300 ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYEAVF 355
I ++ SSL++ + ++ +A+ +F+ + K N V++ ++ +C+ K E
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 356 ELVRE---RG-VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLY 411
EL RE RG V + + T+++ + +++ + V G D+I S L+D
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 412 AKCGCVDFAQRLFLSMEVRNQ----ITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDY 467
K G ++ A +F ++ T+N MI G+ + G+ + +LF + +G++P+
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Query: 468 ITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMI-------DLLGRAEMIE 520
I + ++ GL +E F M E G P YN +I D AE+I+
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREM-KEDGTLPNSGTYNTLIRARLRDGDKAASAELIK 594
Query: 521 EAES 524
E S
Sbjct: 595 EMRS 598
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 111/486 (22%), Positives = 199/486 (40%), Gaps = 88/486 (18%)
Query: 108 LYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAF 167
L LKL + + S + I+ + L+SA + + + L +M +L + + +
Sbjct: 57 LDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLY 116
Query: 168 TISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDES 227
+ + +I + L L + ++ G+ + V S+L++ Y + + +A+ L D+
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 228 PEPE---DVVGWTAIISTLTRNDMFREALRLFVAM-HRGCGLVPDGFTFGTLLAACANLG 283
E + V + +I L ++ EA+ L M RGC PD FT+GT+
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQ--PDLFTYGTV-------- 226
Query: 284 WLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLS 343
V GL G++ + SLL K GK+ +A VV +T ++
Sbjct: 227 -----------VNGLCKRGDIDLALSLLKKMEK-GKI-EADVVI----------YTTIID 263
Query: 344 AYCQNKEYEAVFELVRE---RGV-SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR 399
A C K L E +G+ ++ + +++R C Y G W
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL-------------CNY---GRWS 307
Query: 400 DVIVESALVDLYAKCGCVDFAQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELF 455
D A RL M R N +T++A+I + G+ E +L+
Sbjct: 308 D-------------------ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 456 EDMIKEGMEPDYITFIGVLFA-CSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLG 514
++MIK ++PD T+ ++ C H L DE + F LM+ + P V YN +I
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRL-DEAKHMFELMISK-DCFPNVVTYNTLIKGFC 406
Query: 515 RAEMIEEAESLLENADCR---YDHSLWAVLLGACTKCSDYVTAERVARKMIE--LEPDFH 569
+A+ +EE L R + + L+ + D A+++ +KM+ + PD
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 570 LSYVLL 575
+LL
Sbjct: 467 TYSILL 472
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 162/339 (47%), Gaps = 18/339 (5%)
Query: 200 NTVISSALVDMYGRNRAVRDALKLFDESPE---PEDVVGWTAIISTLTRNDMFREALRLF 256
N I + ++ + GR + L++FDE P V +TA+I+ RN + +L L
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 257 VAMHRGCGLVPDGFTFGTLLAACANLGWLRQGK-ELHAKVVGLGICGNVVVESSLLDMYG 315
M + + P T+ T++ ACA G +G L A++ GI ++V ++LL
Sbjct: 200 DRM-KNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 316 KCGKVGQARVVFDRLGDKNSV----SWTAMLSAYCQNKEYEAVFELVRERG----VSDLY 367
G +A +VF + D V +++ ++ + + + E V +L+ E + D+
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDIT 318
Query: 368 AFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSM 427
++ +L A + ++ V Q G + S L++L+ + G D ++LFL M
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 428 EVRNQ----ITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLV 483
+ N T+N +I + G EV+ LF DM++E +EPD T+ G++FAC GL
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLH 438
Query: 484 DEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEA 522
++ R+ M I P + Y +I+ G+A + EEA
Sbjct: 439 EDARKILQYMTAN-DIVPSSKAYTGVIEAFGQAALYEEA 476
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 184/451 (40%), Gaps = 55/451 (12%)
Query: 129 RDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLR-DLALGAC 187
R + ++T+LI+AY R GR SL+L +M + + P+ T ++VI A ++ D
Sbjct: 174 RSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLG 233
Query: 188 LHAMVISRGFHSNTVISSALVD---MYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLT 244
L A + G + V + L+ + G + ++ D+ ++ ++ T
Sbjct: 234 LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFG 293
Query: 245 RNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNV 304
+ + L M G G +PD ++ LL A A G +++ + ++ G N
Sbjct: 294 KLRRLEKVCDLLGEMASG-GSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNA 352
Query: 305 VVESSLLDMYGKCGKVGQARVVFDRLG----DKNSVSWTAMLSAYCQNKEYEAVF----E 356
S LL+++G+ G+ R +F + D ++ ++ ++ + + ++ V +
Sbjct: 353 NTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD 412
Query: 357 LVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQY---------------VRKGGWRDV 401
+V E D+ + ++ AC G + QY V + +
Sbjct: 413 MVEENIEPDMETYEGIIFAC-GKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAA 471
Query: 402 IVESALVDL---------------------YAKCGCVDFAQ----RLFLSMEVRNQITWN 436
+ E ALV +A+ G V ++ RL S RN+ T+N
Sbjct: 472 LYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFN 531
Query: 437 AMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDE 496
A I Q G+ E ++ + DM K +PD T VL S LVDE R F M
Sbjct: 532 AQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEM-KA 590
Query: 497 YGIKPGVEHYNCMIDLLGRAEMIEEAESLLE 527
I P + Y M+ + G+ E ++ LLE
Sbjct: 591 SDILPSIMCYCMMLAVYGKTERWDDVNELLE 621
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 215/481 (44%), Gaps = 24/481 (4%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
++ LL K + F +L GI + + + L+ + + LP A + +
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRS-QLPLALAVLGKM 142
Query: 127 AV----RDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDL 182
+I+ +SL++ Y + R ++ L QM +PN T +++I
Sbjct: 143 MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 183 ALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESP----EPEDVVGWTA 238
+ L ++++G + V +V+ + A L ++ EP V+ +
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEP-GVLIYNT 261
Query: 239 IISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGL 298
II L + +AL LF M G+ P+ T+ +L++ N G L + ++
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 299 GICGNVVVESSLLDMYGKCGKVGQARVVFD----RLGDKNSVSWTAMLSAYCQNK---EY 351
I +V S+L+D + K GK+ +A ++D R D + V+++++++ +C + E
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 352 EAVFE-LVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDL 410
+ +FE +V + D+ + T+++ V G EV + ++G + + + L+
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 411 YAKCGCVDFAQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPD 466
+ G D AQ +F M N +T+N ++ GL +NG+ + + +FE + + MEP
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 467 YITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLL 526
T+ ++ G V++G F + + G+KP V YN MI R EEA++L
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 527 E 527
+
Sbjct: 560 K 560
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 213/485 (43%), Gaps = 31/485 (6%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
Y+ L+ + S + +K G + +SLL Y + +A L D +
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH-SKRISEAVALVDQM 177
Query: 127 AVR----DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDL 182
V + + + +LI + ++ L +M+ +P+ T V+ K D
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 183 ALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEP---EDVVGWTAI 239
L L + +I + ++D + + + DAL LF E +VV ++++
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG 299
IS L + +A RL M + PD FTF L+ A G L + ++L+ ++V
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIER-KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 300 ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYEAVF 355
I ++V SSL++ + ++ +A+ +F+ + K + V++ ++ +C+ K E
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416
Query: 356 ELVRE---RG-VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLY 411
E+ RE RG V + + +++ + +E+ + V G +++ + L+D
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 412 AKCGCVDFAQRLFLSMEVRNQI-----TWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPD 466
K G ++ A +F ++ R+++ T+N MI G+ + G+ + +LF ++ +G++PD
Sbjct: 477 CKNGKLEKAMVVFEYLQ-RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 467 YITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMI-------DLLGRAEMI 519
+ + ++ G +E F M E G P YN +I D AE+I
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEM-KEDGTLPNSGCYNTLIRARLRDGDREASAELI 594
Query: 520 EEAES 524
+E S
Sbjct: 595 KEMRS 599
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 167/372 (44%), Gaps = 21/372 (5%)
Query: 131 IIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHA 190
++ + ++I + ++L LF +M + PN T SS+I+ + + L +
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 191 MVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDE----SPEPEDVVGWTAIISTLTRN 246
+I R + + SAL+D + + + +A KL+DE S +P +V ++++I+ +
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS-IVTYSSLINGFCMH 374
Query: 247 DMFREALRLFVAM-HRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV 305
D EA ++F M + C PD T+ TL+ + +G E+ ++ G+ GN V
Sbjct: 375 DRLDEAKQMFEFMVSKHC--FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGD----KNSVSWTAMLSAYCQNKEYE---AVFE-L 357
+ L+ + G A+ +F + N +++ +L C+N + E VFE L
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 358 VRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCV 417
R + +Y + ++ V G ++ C KG DV+ + ++ + + G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 418 DFAQRLFLSME----VRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGV 473
+ A LF M+ + N +N +I ++G EL ++M G D T IG+
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST-IGL 611
Query: 474 LFACSHTGLVDE 485
+ H G +D+
Sbjct: 612 VTNMLHDGRLDK 623
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 182/409 (44%), Gaps = 37/409 (9%)
Query: 219 DALKLFDE----SPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGT 274
DA+ LF E P P ++ ++ ++S + + + F + L M + G+ + +T+
Sbjct: 64 DAVALFGEMVKSRPFPS-IIEFSKLLSAIAKMNKFDVVISLGEQM-QNLGIPHNHYTYSI 121
Query: 275 LLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLG--- 331
L+ L + K++ LG N+V SSLL+ Y ++ +A + D++
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 332 -DKNSVSWTAMLSA-YCQNKEYEA---VFELVRERGVSDLYAFGTVL-----RACSGVAA 381
N+V++ ++ + NK EA + +V + DL +G V+ R + +A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 382 VMLGKEVHCQYVRKGGWRD-VIVESALVDLYAKCGCVDFAQRLFLSMEVR----NQITWN 436
+L K + +G V++ + ++D K +D A LF ME + N +T++
Sbjct: 242 NLLNK------MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 437 AMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDE 496
++I L GR ++ L DMI+ + PD TF ++ A G + E + + MV
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 497 YGIKPGVEHYNCMIDLLGRAEMIEEAESLLE---NADCRYDHSLWAVLLGACTKCSDYVT 553
I P + Y+ +I+ + ++EA+ + E + C D + L+ K
Sbjct: 356 -SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 554 AERVARKMIE--LEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGV 600
V R+M + L + +L+ +++A G + A EI K M GV
Sbjct: 415 GMEVFREMSQRGLVGNTVTYNILIQGLFQA-GDCDMAQEIFKEMVSDGV 462
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 192/415 (46%), Gaps = 20/415 (4%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
D+ L++ + ++ +P + +M+ L EP+ T +S+I + +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPE---PEDVVGWTAIISTLTRN 246
++ G + V+ + ++D +N V AL LFD+ DVV +T++++ L +
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
+R+A L M + + PD TF L+ A G +EL+ +++ + I N+
Sbjct: 226 GRWRDADSLLRGMTKR-KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFT 284
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYE---AVFELVR 359
+SL++ + G V +AR +F + K + V++T++++ +C+ K+ + +F +
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 360 ERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
++G++ + + T+++ V + +EV V +G ++ + L+ G V
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 419 FAQRLFLSMEVR-------NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFI 471
A +F M+ R N T+N ++ GL NG+ + L +FEDM K M+ IT+
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYT 464
Query: 472 GVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLL 526
++ G V F + + G+KP V Y MI L R + EA L
Sbjct: 465 IIIQGMCKAGKVKNAVNLFCSLPSK-GVKPNVVTYTTMISGLFREGLKHEAHVLF 518
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 146/343 (42%), Gaps = 20/343 (5%)
Query: 39 CKDGSLRQALHLLNTSQTT-LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHS 97
CK+G + AL L + + + P++ V+Y SL+ + + +L K I
Sbjct: 188 CKNGHVNYALSLFDQMENYGIRPDV--VMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 98 DRFVGNSLLTLYLKLGPHLPQAQTLFDSL----AVRDIIAWTSLISAYTRAGRPINSLQL 153
D N+L+ ++K G L A+ L++ + +I +TSLI+ + G + Q+
Sbjct: 246 DVITFNALIDAFVKEGKFL-DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 154 FSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGR 213
F M P+ +S+I K + + + + +G NT+ + L+ +G+
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 214 NRAVRDALKLFDESPE---PEDVVGWTAIISTLTRNDMFREALRLFVAMHRG--CGLVPD 268
A ++F P ++ + ++ L N ++AL +F M + G+ P+
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424
Query: 269 GFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFD 328
+T+ LL G L + + + + ++ + ++ K GKV A +F
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484
Query: 329 RLGDK----NSVSWTAMLSAYCQ---NKEYEAVFELVRERGVS 364
L K N V++T M+S + E +F ++E GVS
Sbjct: 485 SLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 7/172 (4%)
Query: 433 ITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFAL 492
+T+ ++I G R E + + M++ G++PD + + ++ + G V+ F
Sbjct: 143 VTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQ 202
Query: 493 MVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRY---DHSLWAVLLGACTKCS 549
M + YGI+P V Y +++ L + +A+SLL R D + L+ A K
Sbjct: 203 M-ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEG 261
Query: 550 DYVTAERVARKMIELE--PDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRG 599
++ AE + +MI + P+ +Y L N + G ++A ++ LME +G
Sbjct: 262 KFLDAEELYNEMIRMSIAPNI-FTYTSLINGFCMEGCVDEARQMFYLMETKG 312
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 191/411 (46%), Gaps = 23/411 (5%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
++ +T I RAG+ + ++ +M D P+ T + +I A R L +
Sbjct: 257 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF 316
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPE----DVVGWTAIISTLTR 245
+ + + V L+D + NR + D++K F E + DVV +T ++ L +
Sbjct: 317 EKMKTGRHKPDRVTYITLLDRFSDNRDL-DSVKQFWSEMEKDGHVPDVVTFTILVDALCK 375
Query: 246 NDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV 305
F EA M R G++P+ T+ TL+ + L EL + LG+
Sbjct: 376 AGNFGEAFDTLDVM-RDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAY 434
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQ---NKEYEAVFELV 358
+D YGK G A F+++ K N V+ A L + + ++E + +F +
Sbjct: 435 TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL 494
Query: 359 RERG-VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCV 417
++ G V D + +++ S V + ++ + + G DVIV ++L++ K V
Sbjct: 495 KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554
Query: 418 DFAQRLFLSM-EVRNQ---ITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGV 473
D A ++F+ M E++ + +T+N ++ GL +NG+ E +ELFE M+++G P+ ITF
Sbjct: 555 DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF-NT 613
Query: 474 LF--ACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEA 522
LF C + + + F +M + G P V YN +I L + ++EA
Sbjct: 614 LFDCLCKNDEVTLALKMLFKMM--DMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 109/532 (20%), Positives = 224/532 (42%), Gaps = 67/532 (12%)
Query: 128 VRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGAC 187
V D++ +T L+ A +AG + M D + PN T +++I ++ L
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 419
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEP---EDVVGWTAIISTLT 244
L + S G +D YG++ AL+ F++ ++V A + +L
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 479
Query: 245 RNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNV 304
+ REA ++F + + GLVPD T+ ++ + +G + + +L ++++ G +V
Sbjct: 480 KAGRDREAKQIFYGL-KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538
Query: 305 VVESSLLD-MY----------------------------------GKCGKVGQARVVFDR 329
+V +SL++ +Y GK GK+ +A +F+
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598
Query: 330 LGDK----NSVSWTAMLSAYCQNKEY----EAVFELVRERGVSDLYAFGTVLRACSGVAA 381
+ K N++++ + C+N E + +F+++ V D++ + T++
Sbjct: 599 MVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ 658
Query: 382 VMLGKEVHCQY--VRKGGWRDVIVESALVDLYAKCGCVDFAQR-----LFLSMEVRNQIT 434
V KE C + ++K + D + L+ K ++ A + L+ + +
Sbjct: 659 V---KEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLF 715
Query: 435 WNAMIGGLAQNGRGTEVLELFEDMIKEGM--EPDYITFIGVLFACSHTGLVDEGRRYFAL 492
W +IG + + E ++ G+ + D I + ++C H V R F
Sbjct: 716 WEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNN-VSGARTLFEK 774
Query: 493 MVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESL---LENADCRYDHSLWAVLLGACTKCS 549
+ G++P + YN +I L A+MIE A+ + +++ C D + + LL A K
Sbjct: 775 FTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSG 834
Query: 550 DYVTAERVARKMI--ELEPDFHLSYVLLGNIYRAVGRWNDAMEI-RKLMEDR 598
+ ++M E E + +++ + +A G +DA+++ LM DR
Sbjct: 835 KIDELFELYKEMSTHECEANTITHNIVISGLVKA-GNVDDALDLYYDLMSDR 885
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 123/626 (19%), Positives = 265/626 (42%), Gaps = 71/626 (11%)
Query: 39 CKDGSLRQALHLLNTSQTT-LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHS 97
CK G+ +A L+ + + PNL Y +L+ + L + G+
Sbjct: 374 CKAGNFGEAFDTLDVMRDQGILPNLHT--YNTLICGLLRVHRLDDALELFGNMESLGVKP 431
Query: 98 DRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVR----DIIAWTSLISAYTRAGRPINSLQL 153
+ + Y K G + +T F+ + + +I+A + + + +AGR + Q+
Sbjct: 432 TAYTYIVFIDYYGKSGDSVSALET-FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 490
Query: 154 FSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGR 213
F + D+ + P++ T + ++ SK+ ++ L + ++ G + ++ ++L++ +
Sbjct: 491 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYK 550
Query: 214 NRAVRDALKLFDESPE---PEDVVGWTAIISTLTRNDMFREALRLFVAM-HRGCGLVPDG 269
V +A K+F E VV + +++ L +N +EA+ LF M +GC P+
Sbjct: 551 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP--PNT 608
Query: 270 FTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDR 329
TF TL + ++ K++ +G +V ++++ K G+V +A F +
Sbjct: 609 ITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ 668
Query: 330 LGD---KNSVSWTAMLSAYCQNKEYEAVFELVR------------------------ERG 362
+ + V+ +L + E ++++ E G
Sbjct: 669 MKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAG 728
Query: 363 VSDLYAFGTVLRA---CSGVAAVMLGK-EVHCQYVRKGGWR--------DVIVESALVDL 410
+ + +F L A C ++++ C++ G R D+ V+ L
Sbjct: 729 IDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTY 788
Query: 411 YAKCG------CVDFAQRLFLSME----VRNQITWNAMIGGLAQNGRGTEVLELFEDMIK 460
G ++ AQ +FL ++ + + T+N ++ ++G+ E+ EL+++M
Sbjct: 789 NLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMST 848
Query: 461 EGMEPDYITFIGVLFACSHTGLVDEG-RRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMI 519
E + IT V+ G VD+ Y+ LM D P Y +ID L ++ +
Sbjct: 849 HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR-DFSPTACTYGPLIDGLSKSGRL 907
Query: 520 EEAESLLE---NADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIE--LEPDFHLSYVL 574
EA+ L E + CR + +++ +L+ K + A + ++M++ + PD +Y +
Sbjct: 908 YEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK-TYSV 966
Query: 575 LGNIYRAVGRWNDAMEIRKLMEDRGV 600
L + VGR ++ + K +++ G+
Sbjct: 967 LVDCLCMVGRVDEGLHYFKELKESGL 992
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 110/559 (19%), Positives = 224/559 (40%), Gaps = 66/559 (11%)
Query: 25 GFVASSTDSEILQHC--KDGSLRQALHLLN-TSQTTLDPNLKPVLYASLLQTCTKTSSFL 81
G V S ++ C K G + +A+ LL+ + +P++ ++ SL+ T K
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV--IVVNSLINTLYKADRVD 555
Query: 82 HGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVR----DIIAWTSL 137
+ + + N+LL K G + +A LF+ + + + I + +L
Sbjct: 556 EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNG-KIQEAIELFEGMVQKGCPPNTITFNTL 614
Query: 138 ISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACL-HAMVISRG 196
+ +L++ +M+D+ P+ FT +++I K + C H M +
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM--KKL 672
Query: 197 FHSNTVISSALVDMYGRNRAVRDALK-----LFDESPEP-----EDVVG----------- 235
+ + V L+ + + DA K L++ + +P ED++G
Sbjct: 673 VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNA 732
Query: 236 -------------------WTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLL 276
II +++ A LF + G+ P T+ L+
Sbjct: 733 VSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLI 792
Query: 277 AACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLG----D 332
+ +++ +V G +V + LLD YGK GK+ + ++ + +
Sbjct: 793 GGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECE 852
Query: 333 KNSVSWTAMLSAYCQ----NKEYEAVFELVRERGVSDLY-AFGTVLRACSGVAAVMLGKE 387
N+++ ++S + + + ++L+ +R S +G ++ S + K+
Sbjct: 853 ANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQ 912
Query: 388 VHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSM---EVRNQI-TWNAMIGGLA 443
+ + G + + + L++ + K G D A LF M VR + T++ ++ L
Sbjct: 913 LFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLC 972
Query: 444 QNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGV 503
GR E L F+++ + G+ PD + + ++ + ++E F M GI P +
Sbjct: 973 MVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDL 1032
Query: 504 EHYNCMIDLLGRAEMIEEA 522
YN +I LG A M+EEA
Sbjct: 1033 YTYNSLILNLGIAGMVEEA 1051
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 183/437 (41%), Gaps = 31/437 (7%)
Query: 110 LKLGPHLPQAQTLFD----SLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPN 165
L++ L + +FD + RD + ++ + + G + +M + N
Sbjct: 128 LRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLN 187
Query: 166 AFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFD 225
A++ + +I K R ++ +I GF + S+L+ G+ R + + L
Sbjct: 188 AYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLK 247
Query: 226 ESPE---PEDVVGWTAIISTLTRNDMFREALRLFVAM-HRGCGLVPDGFTFGTLLAACAN 281
E +V +T I L R EA + M GCG PD T+ L+ A
Sbjct: 248 EMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCG--PDVVTYTVLIDALCT 305
Query: 282 LGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGD----KNSVS 337
L KE+ K+ + V +LLD + + + + + + V+
Sbjct: 306 ARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVT 365
Query: 338 WTAMLSAYCQNKEYEAVF---ELVRERGV-SDLYAFGT----VLRACSGVAAVMLGKEVH 389
+T ++ A C+ + F +++R++G+ +L+ + T +LR A+ L +
Sbjct: 366 FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNME 425
Query: 390 CQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR----NQITWNAMIGGLAQN 445
V+ + ++ +D Y K G A F M+ + N + NA + LA+
Sbjct: 426 SLGVKPTAYTYIV----FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 481
Query: 446 GRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEH 505
GR E ++F + G+ PD +T+ ++ S G +DE + + M+ E G +P V
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM-ENGCEPDVIV 540
Query: 506 YNCMIDLLGRAEMIEEA 522
N +I+ L +A+ ++EA
Sbjct: 541 VNSLINTLYKADRVDEA 557
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 13/218 (5%)
Query: 123 FDSLAVRDI----IAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASK 178
+D ++ RD + LI +++GR + QLF MLD PN + +I K
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 179 LRDLALGACLHAMVISRGFHSNTVISSALVD---MYGRNRAVRDALKLFDESPEP---ED 232
+ L ++ G + S LVD M GR V + L F E E D
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR---VDEGLHYFKELKESGLNPD 995
Query: 233 VVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELH 292
VV + II+ L ++ EAL LF M G+ PD +T+ +L+ G + + +++
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1055
Query: 293 AKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRL 330
++ G+ NV ++L+ Y GK A V+ +
Sbjct: 1056 NEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 172/386 (44%), Gaps = 26/386 (6%)
Query: 236 WTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV 295
+ +I L ++ EA+ ++ M G P T+ +L+ + L ++
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILE-GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 296 VGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEY 351
LG+ NV + + + G+ GK+ +A + R+ D+ + V++T ++ A C ++
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309
Query: 352 EA---VFELVRE-RGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESAL 407
+ VFE ++ R D + T+L S + K+ + + G DV+ + L
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTIL 369
Query: 408 VDLYAKCGCVDFAQRLFLSMEVR-------NQITWNAMIGGLAQNGRGTEVLELFEDMIK 460
VD K G +F + F +++V N T+N +I GL + R + LELF +M
Sbjct: 370 VDALCKAG--NFGEA-FDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426
Query: 461 EGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIE 520
G++P T+I + +G F M + GI P + N + L +A
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK-GIAPNIVACNASLYSLAKAGRDR 485
Query: 521 EAESL---LENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIE--LEPDFHLSYVLL 575
EA+ + L++ D + +++ +K + A ++ +M+E EPD + L+
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545
Query: 576 GNIYRAVGRWNDAMEIRKLMEDRGVK 601
+Y+A R ++A ++ M++ +K
Sbjct: 546 NTLYKA-DRVDEAWKMFMRMKEMKLK 570
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 140/356 (39%), Gaps = 36/356 (10%)
Query: 159 DLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVR 218
DL ++P T + +I + + + + V S G + + L+D YG++ +
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID 837
Query: 219 DALKLFDESPEPE---DVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTL 275
+ +L+ E E + + +IS L + +AL L+ + P T+G L
Sbjct: 838 ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 897
Query: 276 LAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNS 335
+ + G L + K+L ++ G N + + L++ +GK G+ A +F R
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKR------ 951
Query: 336 VSWTAMLSAYCQNKEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRK 395
+V+E DL + ++ V V G +
Sbjct: 952 ---------------------MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 990
Query: 396 GGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQI-----TWNAMIGGLAQNGRGTE 450
G DV+ + +++ K ++ A LF M+ I T+N++I L G E
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 451 VLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHY 506
+++ ++ + G+EP+ TF ++ S +G + + MV G P Y
Sbjct: 1051 AGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG-GFSPNTGTY 1105
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/453 (23%), Positives = 200/453 (44%), Gaps = 31/453 (6%)
Query: 91 LKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINS 150
L++G+H+ +F N L L+ ++ P + II +T L+S + R
Sbjct: 55 LRNGLHNLQF--NDALDLFTRMVHSRP----------LPSIIDFTRLLSVIAKMNRYDVV 102
Query: 151 LQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDM 210
+ LF QM L + P T + V+ +C ++ GF + V ++L++
Sbjct: 103 ISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNG 162
Query: 211 YGRNRAVRDALKLFDE----SPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLV 266
Y + DA+ LFD+ +P +VV +T +I L +N A+ LF M G
Sbjct: 163 YCHWNRIEDAIALFDQILGMGFKP-NVVTYTTLIRCLCKNRHLNHAVELFNQMGTN-GSR 220
Query: 267 PDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVV 326
P+ T+ L+ +G L ++ I NV+ ++L+D + K GK+ +A+ +
Sbjct: 221 PNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKEL 280
Query: 327 FDRLGD----KNSVSWTAMLSAYCQN---KEYEAVFELVRERGV-SDLYAFGTVLRACSG 378
++ + + ++ ++++ C E +F L+ G + + T++
Sbjct: 281 YNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCK 340
Query: 379 VAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQI----T 434
V G ++ + +KG + I + L+ Y G D AQ +F M R T
Sbjct: 341 SKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRT 400
Query: 435 WNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMV 494
+N ++ GL NG+ + L +FE M K M+ + +T+ ++ G V++ F +
Sbjct: 401 YNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLF 460
Query: 495 DEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLE 527
+ G+KP V Y MI R +I EA+SL +
Sbjct: 461 SK-GMKPNVITYTTMISGFCRRGLIHEADSLFK 492
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 171/378 (45%), Gaps = 17/378 (4%)
Query: 144 AGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVI 203
+ +P + +M+ L EP+ T +S++ + L ++ GF N V
Sbjct: 131 SSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVT 190
Query: 204 SSALVDMYGRNRAVRDALKLFDE---SPEPEDVVGWTAIISTLTRNDMFREALRLFVAMH 260
+ L+ +NR + A++LF++ + +VV + A+++ L + +A L M
Sbjct: 191 YTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMM 250
Query: 261 RGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLD---MYGKC 317
+ + P+ TF L+ A +G L + KEL+ ++ + + +V SL++ MYG
Sbjct: 251 KR-RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309
Query: 318 GKVGQARVVFDRLG-DKNSVSWTAMLSAYCQNKEYE----AVFELVRERGVSDLYAFGTV 372
+ Q + +R G N V +T ++ +C++K E +E+ ++ V++ + +
Sbjct: 310 DEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVL 369
Query: 373 LRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR-- 430
++ V + +EV Q + D+ + L+D G V+ A +F M R
Sbjct: 370 IQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM 429
Query: 431 --NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRR 488
N +T+ +I G+ + G+ + +LF + +GM+P+ IT+ ++ GL+ E
Sbjct: 430 DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADS 489
Query: 489 YFALMVDEYGIKPGVEHY 506
F M E G P Y
Sbjct: 490 LFKKM-KEDGFLPNESVY 506
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 9/216 (4%)
Query: 391 QYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR----NQITWNAMIGGLAQNG 446
Q + G +V+ + L+ K ++ A LF M N +T+NA++ GL + G
Sbjct: 178 QILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIG 237
Query: 447 RGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHY 506
R + L DM+K +EP+ ITF ++ A G + E + + +M+ + + P V Y
Sbjct: 238 RWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI-QMSVYPDVFTY 296
Query: 507 NCMIDLLGRAEMIEEAES---LLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIE 563
+I+ L +++EA L+E C + ++ L+ K ++ +M +
Sbjct: 297 GSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQ 356
Query: 564 LEPDFH-LSYVLLGNIYRAVGRWNDAMEIRKLMEDR 598
+ ++Y +L Y VGR + A E+ M R
Sbjct: 357 KGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSR 392
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 210/487 (43%), Gaps = 52/487 (10%)
Query: 76 KTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVR----DI 131
+ L ++ A K G D ++L+ + G + +A L D + D+
Sbjct: 117 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEG-RVSEAVALVDRMVEMKQRPDL 175
Query: 132 IAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAM 191
+ ++LI+ GR +L L +M++ +P+ T V+ K + AL L
Sbjct: 176 VTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRK 235
Query: 192 VISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPE---PEDVVGWTAIISTLTRNDM 248
+ R ++ V S ++D ++ + DAL LF+E DVV ++++I L +
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 249 FREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVES 308
+ + ++ M G ++PD TF L+ G L + KEL+ +++ GI + + +
Sbjct: 296 WDDGAKMLREMI-GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYN 354
Query: 309 SLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYEAVFELVRERGVS 364
SL+D + K + +A +FD + K + V+++ ++++YC+ K + L RE
Sbjct: 355 SLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE---- 410
Query: 365 DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLF 424
KG + I + LV + + G ++ A+ LF
Sbjct: 411 ---------------------------ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 425 LSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHT 480
M R + +T+ ++ GL NG + LE+FE M K M + ++ +
Sbjct: 444 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 503
Query: 481 GLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESL---LENADCRYDHSL 537
VD+ F + D+ G+KP V YN MI L + + EA+ L ++ C D
Sbjct: 504 SKVDDAWSLFCSLSDK-GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 562
Query: 538 WAVLLGA 544
+ +L+ A
Sbjct: 563 YNILIRA 569
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 113/490 (23%), Positives = 208/490 (42%), Gaps = 96/490 (19%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSV---------ITAASKLR 180
D+ T +I+ Y R + + + + + L EP+ T S++ ++ A L
Sbjct: 104 DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALV 163
Query: 181 D----------------LALGACLHAMV----------ISRGFHSNTVISSALVDMYGRN 214
D L G CL V + GF + V +++ ++
Sbjct: 164 DRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKS 223
Query: 215 RAVRDALKLFDESPE---PEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFT 271
AL LF + E VV ++ +I +L ++ F +AL LF M G+ D T
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK-GIKADVVT 282
Query: 272 FGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLG 331
+ +L+ N G G ++ +++G I +VV S+L+D++ K GK+ +A+ +++ +
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342
Query: 332 DK----NSVSWTAMLSAYCQNK---EYEAVFELVRERGVSDLYAFGTVLRACSGVAAVML 384
+ +++++ +++ +C+ E +F+L+
Sbjct: 343 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM-------------------------- 376
Query: 385 GKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSME----VRNQITWNAMIG 440
V KG D++ S L++ Y K VD RLF + + N IT+N ++
Sbjct: 377 --------VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Query: 441 GLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIK 500
G Q+G+ ELF++M+ G+ P +T+ G+L GL D G AL + E K
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTY-GILL----DGLCDNGELNKALEIFEKMQK 483
Query: 501 P----GVEHYNCMIDLLGRAEMIEEAESL---LENADCRYDHSLWAVLLGACTKCSDYVT 553
G+ YN +I + A +++A SL L + + D + V++G K
Sbjct: 484 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 543
Query: 554 AERVARKMIE 563
A+ + RKM E
Sbjct: 544 ADMLFRKMKE 553
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 163/361 (45%), Gaps = 36/361 (9%)
Query: 39 CKDGSLRQALHLLNTSQTTLDPNLKP--VLYASLLQTCTKTSSFLHGTTLHAHALKSGIH 96
CK G+ AL L + + N+K V Y+ ++ + K SF +L GI
Sbjct: 221 CKSGNSALALDLFRKME---ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277
Query: 97 SDRFVGNSLLTLYLKLGPHLPQAQTLFDSLA---VRDIIAWTSLISAYTRAGRPINSLQL 153
+D +SL+ G A+ L + + + D++ +++LI + + G+ + + +L
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 154 FSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGR 213
+++M+ + P+ T +S+I K L + +++S+G + V S L++ Y +
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Query: 214 NRAVRDALKLFDESPEP---EDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGF 270
+ V D ++LF E + + + ++ ++ A LF M G+ P
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR-GVPPSVV 456
Query: 271 TFGTLLAACANLGWLRQGKELHAKV------VGLGICGNVVVESSLLDMYGKCG--KVGQ 322
T+G LL + G L + E+ K+ +G+GI N+++ +G C KV
Sbjct: 457 TYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY-NIII-------HGMCNASKVDD 508
Query: 323 ARVVFDRLGDK----NSVSWTAMLSAYCQN---KEYEAVFELVRERGVS-DLYAFGTVLR 374
A +F L DK + V++ M+ C+ E + +F ++E G + D + + ++R
Sbjct: 509 AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR 568
Query: 375 A 375
A
Sbjct: 569 A 569
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 112/221 (50%)
Query: 346 CQNKEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVES 405
CQ + Y+ EL+ + + D F + +C+ + ++ K+VH +++ D + +
Sbjct: 216 CQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNN 275
Query: 406 ALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEP 465
++ ++ +C + A+R+F M ++ +W+ M+ + NG G + L LFE+M K G++P
Sbjct: 276 MVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKP 335
Query: 466 DYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESL 525
+ TF+ V AC+ G ++E +F M +E+GI P EHY ++ +LG+ + EAE
Sbjct: 336 NEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQY 395
Query: 526 LENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEP 566
+ + W + D + + M++++P
Sbjct: 396 IRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDP 436
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 9/144 (6%)
Query: 243 LTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICG 302
L + ++++A+ L G +PD F L +CANL L K++H + G
Sbjct: 215 LCQRRLYKDAIELLDK-----GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRG 269
Query: 303 NVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQN---KEYEAVFELVR 359
+ + + ++ M+G+C + A+ VFD + DK+ SW M+ AY N + +FE +
Sbjct: 270 DPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMT 329
Query: 360 ERGV-SDLYAFGTVLRACSGVAAV 382
+ G+ + F TV AC+ V +
Sbjct: 330 KHGLKPNEETFLTVFLACATVGGI 353
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 6/189 (3%)
Query: 156 QMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNR 215
++LD P+ + + + L+ L +H + F + +++ ++ M+G
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 216 AVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTL 275
++ DA ++FD + +D+ W ++ + N M +AL LF M + GL P+ TF T+
Sbjct: 286 SITDAKRVFDHMVD-KDMDSWHLMMCAYSDNGMGDDALHLFEEMTKH-GLKPNEETFLTV 343
Query: 276 LAACANLGWLRQGKELHAKVVG--LGICGNVVVESSLLDMYGKCGKVGQA-RVVFDRLGD 332
ACA +G + + LH + GI +L + GKCG + +A + + D +
Sbjct: 344 FLACATVGGIEEAF-LHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFE 402
Query: 333 KNSVSWTAM 341
+ W AM
Sbjct: 403 PTADFWEAM 411
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 34 EILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKS 93
E+++ C+ + A+ LL+ P+ + + L ++C S H +H H L+S
Sbjct: 211 EVMRLCQRRLYKDAIELLDKGAM---PDRE--CFVLLFESCANLKSLEHSKKVHDHFLQS 265
Query: 94 GIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQL 153
D + N +++++ + + A+ +FD + +D+ +W ++ AY+ G ++L L
Sbjct: 266 KFRGDPKLNNMVISMFGECS-SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHL 324
Query: 154 FSQMLDLDMEPNAFTISSVITAASKL 179
F +M ++PN T +V A + +
Sbjct: 325 FEEMTKHGLKPNEETFLTVFLACATV 350
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 188/411 (45%), Gaps = 14/411 (3%)
Query: 128 VRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGAC 187
V + + + +LI + ++ R +LQL +M + P+A T + VI K + A
Sbjct: 249 VPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAK 308
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRND 247
+ ++ RGF + + L++ + V A LF P+PE V+ + +I +
Sbjct: 309 MVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI-FNTLIHGFVTHG 367
Query: 248 MFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVE 307
+A + M G+VPD T+ +L+ G + E+ + G NV
Sbjct: 368 RLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY 427
Query: 308 SSLLDMYGKCGKVGQARVVFDRLG----DKNSVSWTAMLSAYCQNKEYEAVFELVRE--- 360
+ L+D + K GK+ +A V + + N+V + ++SA+C+ E+ RE
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 361 RGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDF 419
+G D+Y F +++ V + + + +G + + + L++ + + G +
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 420 AQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLF 475
A++L M + ++IT+N++I GL + G + LFE M+++G P I+ ++
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607
Query: 476 ACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLL 526
+G+V+E + MV G P + +N +I+ L RA IE+ ++
Sbjct: 608 GLCRSGMVEEAVEFQKEMVLR-GSTPDIVTFNSLINGLCRAGRIEDGLTMF 657
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 165/421 (39%), Gaps = 55/421 (13%)
Query: 152 QLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMY 211
+F ML + P FT V+ A + ++ L + G N+VI L+
Sbjct: 203 NVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSL 262
Query: 212 GRNRAVRDALKLFDES------PEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGL 265
+ V +AL+L +E P+ E + +I L + D EA ++ M G
Sbjct: 263 SKCNRVNEALQLLEEMFLMGCVPDAET---FNDVILGLCKFDRINEAAKMVNRMLIR-GF 318
Query: 266 VPDGFTFGTLLAACANLGWLRQGKELHAK------------------------------- 294
PD T+G L+ +G + K+L +
Sbjct: 319 APDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSD 378
Query: 295 -VVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNK 349
V GI +V +SL+ Y K G VG A V + +K N S+T ++ +C+
Sbjct: 379 MVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLG 438
Query: 350 EYEAVFELVRERGVSDL----YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVES 405
+ + + ++ E L F ++ A + E+ + RKG DV +
Sbjct: 439 KIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFN 498
Query: 406 ALVDLYAKCGCVDFAQRLFLSM----EVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKE 461
+L+ + + A L M V N +T+N +I + G E +L +M+ +
Sbjct: 499 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 558
Query: 462 GMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEE 521
G D IT+ ++ G VD+ R F M+ + G P N +I+ L R+ M+EE
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD-GHAPSNISCNILINGLCRSGMVEE 617
Query: 522 A 522
A
Sbjct: 618 A 618
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 164/344 (47%), Gaps = 19/344 (5%)
Query: 196 GFHSNTVIS-SALVDMYGRNRAVRDALKLFDESPE---PEDVVGWTAIISTLTRNDM-FR 250
G + NTV + SAL+ YGR+ +A+ +F+ E ++V + A+I + M F+
Sbjct: 262 GGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFK 321
Query: 251 EALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSL 310
+ + F M R G+ PD TF +LLA C+ G + L ++ I +V ++L
Sbjct: 322 QVAKFFDEMQRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTL 380
Query: 311 LDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYEAVFEL---VRERGV 363
LD K G++ A + ++ K N VS++ ++ + + ++ L +R G+
Sbjct: 381 LDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGI 440
Query: 364 S-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQR 422
+ D ++ T+L + V ++ + G +DV+ +AL+ Y K G D ++
Sbjct: 441 ALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKK 500
Query: 423 LFLSME----VRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACS 478
+F M+ + N +T++ +I G ++ G E +E+F + G+ D + + ++ A
Sbjct: 501 VFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALC 560
Query: 479 HTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEA 522
GLV M E GI P V YN +ID GR+ ++ +
Sbjct: 561 KNGLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAFGRSATMDRS 603
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 189/462 (40%), Gaps = 73/462 (15%)
Query: 131 IIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHA 190
+ A+++LISAY R+G ++ +F+ M + + PN T ++VI A K
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGK------------ 315
Query: 191 MVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPE---PEDVVGWTAIISTLTRND 247
+ K FDE D + + ++++ +R
Sbjct: 316 ----------------------GGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 248 MFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVE 307
++ A LF M + D F++ TLL A G + E+ A++ I NVV
Sbjct: 354 LWEAARNLFDEM-TNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 308 SSLLDMYGKCGKVGQARVVFDRLG----DKNSVSWTAMLSAYCQNKEYEAVFELVRERGV 363
S+++D + K G+ +A +F + + VS+ +LS Y + E +++RE
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 364 ----SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDF 419
D+ + +L K+V + R+ +++ S L+D Y+K G
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 420 AQ---RLFLSMEVRNQIT-WNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLF 475
A R F S +R + ++A+I L +NG + L ++M KEG+ P+ +T+ ++
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592
Query: 476 ACSHTGLVDEGRRYF---ALMVDEYGIKPGVE-HYNCMIDLLGR------AEMIEEAESL 525
A + +D Y +L + E N +I L G+ ++ E
Sbjct: 593 AFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEG 652
Query: 526 LENADC-----RYDHSL--------WAVLLGACTKCSDYVTA 554
++ C R H L ++ +L AC++C+ + A
Sbjct: 653 MQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDA 694
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 194/457 (42%), Gaps = 58/457 (12%)
Query: 35 ILQHCKDGSLRQALHLLNT-SQTTLDPNLKPVLYASLLQTCTKTS-SFLHGTTLHAHALK 92
I + + G +A+ + N+ + L PNL V Y +++ C K F +
Sbjct: 275 ISAYGRSGLHEEAISVFNSMKEYGLRPNL--VTYNAVIDACGKGGMEFKQVAKFFDEMQR 332
Query: 93 SGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVR----DIIAWTSLISAYTRAGRPI 148
+G+ DR NSLL + + G A+ LFD + R D+ ++ +L+ A + G+
Sbjct: 333 NGVQPDRITFNSLLAVCSR-GGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 149 NSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALV 208
+ ++ +QM + PN + S+VI +K L + G + V + L+
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL 451
Query: 209 DMY---GRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGL 265
+Y GR+ D L+ +DVV + A++ + + E ++F M R +
Sbjct: 452 SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE-HV 510
Query: 266 VPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARV 325
+P+ T+ TL+ + G ++ E+ + G+ +VV+ S+L+D K G VG A
Sbjct: 511 LPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVS 570
Query: 326 VFDRLGDK----NSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLYAFGTVLRACSGVAA 381
+ D + + N V++ +++ A+ ++ + S Y+ G L S +
Sbjct: 571 LIDEMTKEGISPNVVTYNSIIDAFGRSATMDR----------SADYSNGGSLPFSSSALS 620
Query: 382 VMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGG 441
+ E G R ++ L+ + L+ E N+ T + G
Sbjct: 621 ALTETE---------GNR-------VIQLFGQ-----------LTTESNNRTTKDCEEGM 653
Query: 442 LAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACS 478
+ +LE+F M + ++P+ +TF +L ACS
Sbjct: 654 QELSC----ILEVFRKMHQLEIKPNVVTFSAILNACS 686
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 119/261 (45%), Gaps = 17/261 (6%)
Query: 355 FELVRERGVSDLYAFGTVLRACSG-VAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAK 413
F + RER ++ + + + G V + K + G V SAL+ Y +
Sbjct: 221 FAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGR 280
Query: 414 CGCVDFAQRLFLSMEV----RNQITWNAMIGGLAQNG-RGTEVLELFEDMIKEGMEPDYI 468
G + A +F SM+ N +T+NA+I + G +V + F++M + G++PD I
Sbjct: 281 SGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRI 340
Query: 469 TFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLEN 528
TF +L CS GL + R F M + I+ V YN ++D + + ++ A +L
Sbjct: 341 TFNSLLAVCSRGGLWEAARNLFDEMTNRR-IEQDVFSYNTLLDAICKGGQMDLAFEILAQ 399
Query: 529 ADCRY---DHSLWAVLLGACTKCSDYVTAERVARKM----IELEPDFHLSYVLLGNIYRA 581
+ + ++ ++ K + A + +M I L+ +SY L +IY
Sbjct: 400 MPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALD---RVSYNTLLSIYTK 456
Query: 582 VGRWNDAMEIRKLMEDRGVKK 602
VGR +A++I + M G+KK
Sbjct: 457 VGRSEEALDILREMASVGIKK 477
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 195/411 (47%), Gaps = 17/411 (4%)
Query: 131 IIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHA 190
I+ +SL++ Y R +++ L QM+++ P+ T +++I + L
Sbjct: 155 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 214
Query: 191 MVISRGFHSNTVISSALVDMYGRNRAVRDALKLFD--ESPEPE-DVVGWTAIISTLTRND 247
++ RG N V +V+ + + A L + E+ + E +VV ++ +I +L +
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYR 274
Query: 248 MFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVE 307
+AL LF M G+ P+ T+ +L++ N L + ++ I NVV
Sbjct: 275 HEDDALNLFTEMENK-GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTF 333
Query: 308 SSLLDMYGKCGKVGQARVVFD----RLGDKNSVSWTAMLSAYCQNK---EYEAVFEL-VR 359
++L+D + K GK+ +A ++D R D + +++++++ +C + E + +FEL +
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Query: 360 ERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDF 419
+ ++ + T++ + G E+ + ++G + + + L+ + + D
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 453
Query: 420 AQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLF 475
AQ +F M N +T+N ++ GL +NG+ + + +FE + + MEP T+ ++
Sbjct: 454 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 513
Query: 476 ACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLL 526
G V++G F + + G+KP V YN MI R + EEA++L
Sbjct: 514 GMCKAGKVEDGWDLFCSLSLK-GVKPDVIIYNTMISGFCRKGLKEEADALF 563
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 199/450 (44%), Gaps = 23/450 (5%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
Y L+ + S L +K G +SLL Y G + A L D +
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH-GKRISDAVALVDQM 181
Query: 127 AVR----DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDL 182
D I +T+LI + ++ L +M+ +PN T V+ K D+
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 183 ALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEP---EDVVGWTAI 239
L L + + +N VI S ++D + R DAL LF E +V+ ++++
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG 299
IS L + + +A RL M + P+ TF L+ A G L + ++L+ +++
Sbjct: 302 ISCLCNYERWSDASRLLSDMIER-KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 300 ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYEAVF 355
I ++ SSL++ + ++ +A+ +F+ + K N V++ +++ +C+ K +
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 356 ELVRE---RG-VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLY 411
EL RE RG V + + T++ + V Q V G +++ + L+D
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 480
Query: 412 AKCGCVDFAQRLFLSMEVRNQI-----TWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPD 466
K G ++ A +F ++ R+++ T+N MI G+ + G+ + +LF + +G++PD
Sbjct: 481 CKNGKLEKAMVVFEYLQ-RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539
Query: 467 YITFIGVLFACSHTGLVDEGRRYFALMVDE 496
I + ++ GL +E F M ++
Sbjct: 540 VIIYNTMISGFCRKGLKEEADALFRKMRED 569
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 154/350 (44%), Gaps = 47/350 (13%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
+++ ++++I + + ++L LF++M + + PN T SS+I+ + + L
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDE----SPEPEDVVGWTAIISTLTR 245
+ +I R + N V +AL+D + + + +A KL+DE S +P D+ ++++I+
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP-DIFTYSSLINGFCM 377
Query: 246 NDMFREALRLFVAM-HRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNV 304
+D EA +F M + C P+ T+ TL+ + +G EL ++ G+ GN
Sbjct: 378 HDRLDEAKHMFELMISKDC--FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 305 VVESSLLDMYGKCGKVGQARVVFDRLGD----KNSVSWTAMLSAYCQNKEYE---AVFE- 356
V ++L+ + + A++VF ++ N +++ +L C+N + E VFE
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 357 LVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGC 416
L R + +Y + ++ V G ++ C KG DVI+
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVII------------- 542
Query: 417 VDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPD 466
+N MI G + G E LF M ++G PD
Sbjct: 543 ------------------YNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 119/555 (21%), Positives = 223/555 (40%), Gaps = 100/555 (18%)
Query: 59 DPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQ 118
+P + P L C +F G+ + L++G+HS +KL +
Sbjct: 26 NPRIAPS-SIDLCGMCYWGRAFSSGSGDYREILRNGLHS------------MKLDDAIGL 72
Query: 119 AQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASK 178
+ S + I + L+SA + + + L +M L + N +T + +I +
Sbjct: 73 FGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCR 132
Query: 179 LRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPE---PEDVVG 235
++L L ++ G+ + V S+L++ Y + + DA+ L D+ E D +
Sbjct: 133 RSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT 192
Query: 236 WTAIISTLTRNDMFREALRLFVAM-HRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAK 294
+T +I L ++ EA+ L M RGC P+ T+G +
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQRGCQ--PNLVTYGVV------------------- 231
Query: 295 VVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAV 354
V GL G++ + +LL+ K+ A++ + N V ++ ++ + C+ + +
Sbjct: 232 VNGLCKRGDIDLAFNLLN------KMEAAKI------EANVVIYSTVIDSLCKYRHEDDA 279
Query: 355 FELVRE---RGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLY 411
L E +GV + L +C C Y R W D
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCL------------CNYER---WSD----------- 313
Query: 412 AKCGCVDFAQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDY 467
A RL M R N +T+NA+I + G+ E +L+++MIK ++PD
Sbjct: 314 --------ASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 468 ITFIGVLFA-CSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLL 526
T+ ++ C H L DE + F LM+ + P V YN +I+ +A+ I+E L
Sbjct: 366 FTYSSLINGFCMHDRL-DEAKHMFELMISK-DCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 527 ENADCR---YDHSLWAVLLGACTKCSDYVTAERVARKMIE--LEPDFHLSYVLLGNIYRA 581
R + + L+ + D A+ V ++M+ + P+ LL + +
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483
Query: 582 VGRWNDAMEIRKLME 596
G+ AM + + ++
Sbjct: 484 -GKLEKAMVVFEYLQ 497
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 195/429 (45%), Gaps = 25/429 (5%)
Query: 115 HLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPIN-SLQLFSQMLDLDMEPNAFTISSVI 173
HL QA ++++ +++ A R+ R I+ + +F +ML+ + PN FT + +I
Sbjct: 158 HLAQAHGFMPG-----VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILI 212
Query: 174 TAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFD----ESPE 229
++ + L + ++G N V + L+D Y + R + D KL + E
Sbjct: 213 RGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLE 272
Query: 230 PEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGK 289
P +++ + +I+ L R +E + M+R G D T+ TL+ G Q
Sbjct: 273 P-NLISYNVVINGLCREGRMKEVSFVLTEMNRR-GYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 290 ELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAY 345
+HA+++ G+ +V+ +SL+ K G + +A D++ + N ++T ++ +
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 346 CQNKEYEAVFELVRE---RGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDV 401
Q + ++RE G S + + ++ + V KG DV
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 402 IVESALVDLYAKCGCVDFAQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFED 457
+ S ++ + + VD A R+ M + + IT++++I G + R E +L+E+
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 458 MIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAE 517
M++ G+ PD T+ ++ A G +++ + MV E G+ P V Y+ +I+ L +
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV-EKGVLPDVVTYSVLINGLNKQS 569
Query: 518 MIEEAESLL 526
EA+ LL
Sbjct: 570 RTREAKRLL 578
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 118/558 (21%), Positives = 239/558 (42%), Gaps = 48/558 (8%)
Query: 43 SLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVG 102
SL++ L ++ + D +K SL+ K S +H AH G+ S
Sbjct: 122 SLQETYDLCYSTSSVFDLVVKSYSRLSLID---KALSIVH--LAQAHGFMPGVLS----Y 172
Query: 103 NSLLTLYLKLGPHLPQAQTLF----DSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQML 158
N++L ++ ++ A+ +F +S ++ + LI + AG +L LF +M
Sbjct: 173 NAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKME 232
Query: 159 DLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVD---MYGRNR 215
PN T +++I KLR + G L + +G N + + +++ GR +
Sbjct: 233 TKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMK 292
Query: 216 AVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTL 275
V L + D V + +I + F +AL + M R GL P T+ +L
Sbjct: 293 EVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH-GLTPSVITYTSL 351
Query: 276 LAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK-- 333
+ + G + + E ++ G+C N ++L+D + + G + +A V + D
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Query: 334 --NSVSWTAMLSAYCQNKEYE---AVFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKE 387
+ V++ A+++ +C + E AV E ++E+G+S D+ ++ TVL V
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 471
Query: 388 VHCQYVRKGGWRDVIVESALVDLY-----AKCGCVDFAQRLFLSMEVRNQITWNAMIGGL 442
V + V KG D I S+L+ + K C + + L + + ++ T+ A+I
Sbjct: 472 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP-PDEFTYTALINAY 530
Query: 443 AQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPG 502
G + L+L +M+++G+ PD +T+ ++ + E +R + E +
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 590
Query: 503 VEHY----NC----------MIDLLGRAEMIEEAESLLEN---ADCRYDHSLWAVLLGAC 545
V ++ NC +I M+ EA+ + E+ + + D + + +++
Sbjct: 591 VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGH 650
Query: 546 TKCSDYVTAERVARKMIE 563
+ D A + ++M++
Sbjct: 651 CRAGDIRKAYTLYKEMVK 668
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 193/461 (41%), Gaps = 67/461 (14%)
Query: 39 CKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSD 98
C++G +++ +L T +L V Y +L++ K +F +HA L+ G+
Sbjct: 286 CREGRMKEVSFVL-TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 344
Query: 99 RFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDII----AWTSLISAYTRAGRPINSLQLF 154
SL+ K G ++ +A D + VR + +T+L+ +++ G + ++
Sbjct: 345 VITYTSLIHSMCKAG-NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 155 SQMLDLDMEPNAFTISSVIT---AASKLRDLALGACLHAMVISRGFHSNTVISSALVDMY 211
+M D P+ T +++I K+ D A L M +G + V S ++ +
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAI--AVLEDMK-EKGLSPDVVSYSTVLSGF 460
Query: 212 GRNRAVRDALKLFDESPEP---EDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPD 268
R+ V +AL++ E E D + ++++I +EA L+ M R GL PD
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR-VGLPPD 519
Query: 269 GFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFD 328
FT+ L+ A G L + +LH ++V G+ +VV S L++ K + +A+
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK---- 575
Query: 329 RLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEV 388
RL + +L E V + T++ CS +
Sbjct: 576 RL-----------------------LLKLFYEESVPSDVTYHTLIENCSNIE-------- 604
Query: 389 HCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQ----ITWNAMIGGLAQ 444
++ V+ +L+ + G + A ++F SM +N +N MI G +
Sbjct: 605 ---------FKSVV---SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652
Query: 445 NGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDE 485
G + L+++M+K G +T I ++ A G V+E
Sbjct: 653 AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 165/401 (41%), Gaps = 51/401 (12%)
Query: 233 VVGWTAIISTLTRN--------DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGW 284
V+ + A++ R+ ++F+E L V+ P+ FT+ L+ G
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVS--------PNVFTYNILIRGFCFAGN 220
Query: 285 LRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTA 340
+ L K+ G NVV ++L+D Y K K+ + + K N +S+
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV 280
Query: 341 MLSAYCQN---KEYEAVFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKG 396
+++ C+ KE V + RG S D + T+++ +H + +R G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340
Query: 397 GWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVL 452
VI ++L+ K G ++ A M VR N+ T+ ++ G +Q G E
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 453 ELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVD--EYGIKPGVEHYNCMI 510
+ +M G P +T+ ++ TG +++ A++ D E G+ P V Y+ ++
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA---IAVLEDMKEKGLSPDVVSYSTVL 457
Query: 511 DLLGRAEMIEEA----ESLLENADCRYDHSLWAVLL-GACTK------CSDYVTAERVAR 559
R+ ++EA ++E + D ++ L+ G C + C Y RV
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKG-IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG- 515
Query: 560 KMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGV 600
L PD +Y L N Y G A+++ M ++GV
Sbjct: 516 ----LPPD-EFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 19/215 (8%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
D I ++SLI + R + L+ +ML + + P+ FT +++I A DL LH
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLH 543
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDA----LKLFDESPEPEDVVGWTAI------ 239
++ +G + V S L++ + R+A LKLF E P DV T I
Sbjct: 544 NEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI 603
Query: 240 --------ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKEL 291
I M EA ++F +M G PDG + ++ G +R+ L
Sbjct: 604 EFKSVVSLIKGFCMKGMMTEADQVFESM-LGKNHKPDGTAYNIMIHGHCRAGDIRKAYTL 662
Query: 292 HAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVV 326
+ ++V G + V +L+ K GKV + V
Sbjct: 663 YKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 200/460 (43%), Gaps = 65/460 (14%)
Query: 131 IIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHA 190
I+ SL++ + R ++ L QM+++ +P+ T ++++ + + L
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 194
Query: 191 MVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPE---DVVGWTAIISTLTRND 247
++ +G + V A+++ + AL L ++ + + DVV ++ +I +L +
Sbjct: 195 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYR 254
Query: 248 MFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVE 307
+AL LF M G+ PD FT+ +L++ N G L + ++ I NVV
Sbjct: 255 HVDDALNLFTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTF 313
Query: 308 SSLLDMYGKCGKVGQARVVFD----RLGDKNSVSWTAMLSAYCQNK---EYEAVFEL-VR 359
+SL+D + K GK+ +A +FD R D N V++ ++++ +C + E + +F L V
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 360 ERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDF 419
+ + D+ + T++ V+ G E+ R+G + + + L+ + + D
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDN 433
Query: 420 AQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFE--------------DMIKE 461
AQ +F M N +T+N ++ GL +NG+ + + +FE +++ E
Sbjct: 434 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSE 493
Query: 462 GM---------------------EPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIK 500
GM +PD I + ++ GL +E F M E G
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM-KEDGPL 552
Query: 501 PGVEHYNCMI-------DLLGRAEMIEEAESLLENADCRY 533
P YN +I D AE+I+E S CR+
Sbjct: 553 PDSGTYNTLIRAHLRDGDKAASAELIKEMRS------CRF 586
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 178/374 (47%), Gaps = 21/374 (5%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
D++ ++++I + + ++L LF++M + + P+ FT SS+I+ + + L
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDE----SPEPEDVVGWTAIISTLTR 245
+ ++ R + N V ++L+D + + + +A KLFDE S +P ++V + ++I+
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP-NIVTYNSLINGFCM 357
Query: 246 NDMFREALRLFVAM-HRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNV 304
+D EA ++F M + C +PD T+ TL+ + G EL + G+ GN
Sbjct: 358 HDRLDEAQQIFTLMVSKDC--LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415
Query: 305 VVESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYE---AVFE- 356
V ++L+ + + A++VF ++ N +++ +L C+N + E VFE
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 475
Query: 357 LVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGC 416
L + + D+Y + + V G ++ C KG DVI + ++ + K G
Sbjct: 476 LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGL 535
Query: 417 VDFAQRLFLSME----VRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIG 472
+ A LF+ M+ + + T+N +I ++G EL ++M D T+ G
Sbjct: 536 KEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-G 594
Query: 473 VLFACSHTGLVDEG 486
++ H G +D+G
Sbjct: 595 LVTDMLHDGRLDKG 608
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/436 (19%), Positives = 200/436 (45%), Gaps = 19/436 (4%)
Query: 108 LYLKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAF 167
L+LKL + + S I+ ++ L+SA + + + +M L + N +
Sbjct: 42 LHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLY 101
Query: 168 TISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDES 227
T + +I + L+ + ++ G+ + V ++L++ + + +A+ L D+
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 228 PE---PEDVVGWTAIISTLTRNDMFREALRLFVAMH-RGCGLVPDGFTFGTLLAACANLG 283
E D V +T ++ L +++ EA+ L M +GC PD T+G ++ G
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ--PDLVTYGAVINGLCKRG 219
Query: 284 WLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWT 339
L K+ I +VV+ S+++D K V A +F + +K + +++
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 340 AMLSAYCQNKEYEAVFELVR---ERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRK 395
+++S C + L+ ER ++ ++ F +++ A + ++ +++ + +++
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 396 GGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRN----QITWNAMIGGLAQNGRGTEV 451
+++ ++L++ + +D AQ++F M ++ +T+N +I G + + +
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 452 LELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMID 511
+ELF DM + G+ + +T+ ++ D + F MV + G+ P + YN ++D
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD-GVHPNIMTYNTLLD 458
Query: 512 LLGRAEMIEEAESLLE 527
L + +E+A + E
Sbjct: 459 GLCKNGKLEKAMVVFE 474
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 170/379 (44%), Gaps = 22/379 (5%)
Query: 236 WTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV 295
+ +I+ L R AL + M + G P T +LL + + + L ++
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMK-LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 296 VGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEY 351
V +G + V ++L+ + K +A + +R+ K + V++ A+++ C+ E
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 352 EAVFELVR--ERGV--SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESAL 407
+ L+ E+G +D+ + TV+ + V + + KG DV S+L
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 408 VDLYAKCGCVDFAQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGM 463
+ G A RL M R N +T+N++I A+ G+ E +LF++MI+ +
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 464 EPDYITFIGVLFA-CSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEA 522
+P+ +T+ ++ C H L DE ++ F LMV + + P V YN +I+ +A+ + +
Sbjct: 342 DPNIVTYNSLINGFCMHDRL-DEAQQIFTLMVSKDCL-PDVVTYNTLINGFCKAKKVVDG 399
Query: 523 ESLLENADCR---YDHSLWAVLLGACTKCSDYVTAERVARKMIE--LEPDFHLSYVLLGN 577
L + R + + L+ + SD A+ V ++M+ + P+ LL
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 578 IYRAVGRWNDAMEIRKLME 596
+ + G+ AM + + ++
Sbjct: 460 LCKN-GKLEKAMVVFEYLQ 477
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 194/437 (44%), Gaps = 47/437 (10%)
Query: 122 LFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRD 181
+ DS + + T ++ R G S +L + ++P A+T +++I A K RD
Sbjct: 215 MVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRD 274
Query: 182 LALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPE---PEDVVGWTA 238
+ + ++ G N V + L+++ +N + DA KLFDE E DV +T+
Sbjct: 275 FSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTS 334
Query: 239 IISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGL 298
+IS R + A LF + GL P +T+G L+ +G + + L ++
Sbjct: 335 LISWNCRKGNMKRAFLLFDELTEK-GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSK 393
Query: 299 GICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELV 358
G+ VV ++L+D Y + G V +A +++D + + K ++A
Sbjct: 394 GVNITQVVFNTLIDGYCRKGMVDEASMIYDVM----------------EQKGFQA----- 432
Query: 359 RERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
D++ T+ + + K+ + + G + + L+D+Y K G V+
Sbjct: 433 ------DVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVE 486
Query: 419 FAQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVL 474
A+RLF+ M + N IT+N MI + G+ E +L +M GM+PD T+ ++
Sbjct: 487 EAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI 546
Query: 475 FACSHTGLVDEGRRYFALMVDEYGIKPGVEH----YNCMIDLLGRAEMIEEAESLLENAD 530
VDE R F+ E G+K G++ Y MI L +A +EA L +
Sbjct: 547 HGECIADNVDEAMRLFS----EMGLK-GLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMK 601
Query: 531 CR---YDHSLWAVLLGA 544
+ D+ ++ L+G+
Sbjct: 602 RKGYTIDNKVYTALIGS 618
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 156/372 (41%), Gaps = 57/372 (15%)
Query: 39 CKDGSLRQALHLLNTSQTTLDPNLKP--VLYASLLQTCTKTSSFLHGTTLHAHALKSGIH 96
C+ G + ++ L+ +KP Y +++ K F + K G+
Sbjct: 235 CRRGEVEKSKKLIKEFSV---KGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVV 291
Query: 97 SDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVR----DIIAWTSLISAYTRAGRPINSLQ 152
++ L+ L +K G + A+ LFD + R D+ +TSLIS R G +
Sbjct: 292 YNKVTYTLLMELSVKNG-KMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFL 350
Query: 153 LFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYG 212
LF ++ + + P+++T ++I K+ ++ L + S+G + V+ + L+D Y
Sbjct: 351 LFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYC 410
Query: 213 RNRAVRDA----------------------------LKLFDESPE----------PEDVV 234
R V +A LK +DE+ + V
Sbjct: 411 RKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTV 470
Query: 235 GWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAK 294
+T +I + EA RLFV M G+ P+ T+ ++ A G +++ ++L A
Sbjct: 471 SYTNLIDVYCKEGNVEEAKRLFVEMSSK-GVQPNAITYNVMIYAYCKQGKIKEARKLRAN 529
Query: 295 VVGLGICGNVVVESSLLDMYGKC--GKVGQARVVFDRLG----DKNSVSWTAMLSAYCQN 348
+ G+ + +SL+ +G+C V +A +F +G D+NSV++T M+S +
Sbjct: 530 MEANGMDPDSYTYTSLI--HGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKA 587
Query: 349 KEYEAVFELVRE 360
+ + F L E
Sbjct: 588 GKSDEAFGLYDE 599
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 179/412 (43%), Gaps = 44/412 (10%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
D+I +L++ +G+ ++ L +M++ +PNA T V+ K AL L
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEP---EDVVGWTAIISTLTRN 246
+ R + V S ++D ++ ++ +A LF+E +++ + +I
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
+ + +L M + + P+ TF L+ + G LR+ +ELH +++ GI + +
Sbjct: 312 GRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 307 ESSLLDMYGKCGKVGQARVVFDRL----GDKNSVSWTAMLSAYCQNKEYEAVFELVRERG 362
+SL+D + K + +A + D + D N ++ +++ YC+ + EL R+
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 363 VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQR 422
+ GV A D + + L+ + + G ++ A+
Sbjct: 431 L-------------RGVVA------------------DTVTYNTLIQGFCELGKLNVAKE 459
Query: 423 LFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACS 478
LF M R N +T+ ++ GL NG + LE+FE + K ME D + ++
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 479 HTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENAD 530
+ VD+ F + + G+KPGV+ YN MI L + + EAE L +
Sbjct: 520 NASKVDDAWDLFCSLPLK-GVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 189/436 (43%), Gaps = 23/436 (5%)
Query: 131 IIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHA 190
+I ++ L SA + + L L QM + N +T+S +I + R L L
Sbjct: 88 VIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMG 147
Query: 191 MVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPE---PEDVVGWTAIISTLTRND 247
+I G+ NT+ S L++ V +AL+L D E D++ +++ L +
Sbjct: 148 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 207
Query: 248 MFREALRLFVAM-HRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
EA+ L M GC P+ T+G +L G EL K+ I + V
Sbjct: 208 KEAEAMLLIDKMVEYGCQ--PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYEAVFELVRE-- 360
S ++D K G + A +F+ + K N +++ ++ +C ++ +L+R+
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 361 -RGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
R ++ ++ F ++ + + +E+H + + +G D I ++L+D + K +D
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 419 FAQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVL 474
A ++ M + N T+N +I G + R + LELF M G+ D +T+ ++
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 475 FACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLL---GRAEMIEEAESLLENADC 531
G ++ + F MV + P + Y ++D L G +E E +E +
Sbjct: 446 QGFCELGKLNVAKELFQEMVSR-KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Query: 532 RYDHSLWAVLL-GACT 546
D ++ +++ G C
Sbjct: 505 ELDIGIYNIIIHGMCN 520
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 150/375 (40%), Gaps = 49/375 (13%)
Query: 116 LPQAQTLFDSLAVR----DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISS 171
L A LF+ + ++ +II + LI + AGR + +L M+ + PN T S
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 172 VITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFD----ES 227
+I + K L LH +I RG +T+ ++L+D + + + A ++ D +
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 228 PEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQ 287
+P ++ + +I+ + + + L LF M G+V D T+ TL+ LG L
Sbjct: 399 CDP-NIRTFNILINGYCKANRIDDGLELFRKMSLR-GVVADTVTYNTLIQGFCELGKLNV 456
Query: 288 GKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQ 347
KEL ++V + N+ V++ +L C
Sbjct: 457 AKELFQEMVSRKVPPNI-------------------------------VTYKILLDGLCD 485
Query: 348 NKEYEAVFELVRERGVS----DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIV 403
N E E E+ + S D+ + ++ + V ++ C KG V
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 545
Query: 404 ESALVDLYAKCGCVDFAQRLFLSMEVRNQI----TWNAMIGGLAQNGRGTEVLELFEDMI 459
+ ++ K G + A+ LF ME T+N +I +G T+ ++L E++
Sbjct: 546 YNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605
Query: 460 KEGMEPDYITFIGVL 474
+ G D T V+
Sbjct: 606 RCGFSVDASTIKMVI 620
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 113/255 (44%), Gaps = 13/255 (5%)
Query: 356 ELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCG 415
+++ R + + F + A + L + Q KG ++ S +++ + +C
Sbjct: 78 DMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCR 137
Query: 416 --CVDFA---QRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITF 470
C+ F+ + + L E N IT++ +I GL GR +E LEL + M++ G +PD IT
Sbjct: 138 KLCLAFSAMGKIIKLGYE-PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITI 196
Query: 471 IGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLL---GRAEMIEEAESLLE 527
++ +G E MV EYG +P Y +++++ G+ + E +E
Sbjct: 197 NTLVNGLCLSGKEAEAMLLIDKMV-EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 528 NADCRYDHSLWAVLLGACTKCSDYVTAERV--ARKMIELEPDFHLSYVLLGNIYRAVGRW 585
+ + D +++++ K A + +M + + +L+G A GRW
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA-GRW 314
Query: 586 NDAMEIRKLMEDRGV 600
+D ++ + M R +
Sbjct: 315 DDGAKLLRDMIKRKI 329
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 179/444 (40%), Gaps = 76/444 (17%)
Query: 70 LLQTCTKTSSFLHGTTLHAHALKSGIHSD-RFVGNSLLTLYLKLGPHLPQAQTLFDSLAV 128
L Q C + +HA + +G+ S+ VG + + L + L A LFD +
Sbjct: 18 LWQNCKNIRTL---KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPK 74
Query: 129 RDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACL 188
D+ ++ ++ +P ++ L+++M + P+ +T + V+ A SKL + G
Sbjct: 75 PDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAF 134
Query: 189 HAMVISRGFHSNTVISSALV-------DM------------------------YGRNRAV 217
H V+ GF N + +AL+ D+ Y + +
Sbjct: 135 HGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKI 194
Query: 218 RDALKLFDESP------------------------------EPEDVVGWTAIISTLTRND 247
+A++LFDE P +DVV W A+IS
Sbjct: 195 DEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCG 254
Query: 248 MFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV-----VGLGICG 302
+EAL +F M R G PD T +LL+ACA LG L GK LH + V I
Sbjct: 255 YPKEALGIFKEM-RDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYV 313
Query: 303 NVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAM---LSAYCQNKEYEAVFELVR 359
+ ++L+DMY KCG + +A VF + D++ +W + L+ + E E+ R
Sbjct: 314 GTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEGSIEMFEEMQR 373
Query: 360 ERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVE-SALVDLYAKCGCVD 418
+ + F V+ ACS V G++ I +VD+ + G ++
Sbjct: 374 LKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLE 433
Query: 419 FAQRLFLSMEVR-NQITWNAMIGG 441
A SM++ N I W ++G
Sbjct: 434 EAFMFVESMKIEPNAIVWRTLLGA 457
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 152/385 (39%), Gaps = 98/385 (25%)
Query: 49 HLLNTSQTTLDPNLKPVLYASL---------------LQTCTKTSSFLHGTTLHAHALKS 93
H+L S ++ P LY + L+ C+K +G H ++
Sbjct: 82 HVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRH 141
Query: 94 GIHSDRFVGNSLLTLYLKLGP------------------------------HLPQAQTLF 123
G + +V N+L+ + G + +A LF
Sbjct: 142 GFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLF 201
Query: 124 DSLAVRD-------------------------------IIAWTSLISAYTRAGRPINSLQ 152
D + +D ++ W ++IS Y G P +L
Sbjct: 202 DEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALG 261
Query: 153 LFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMV-----ISRGFHSNTVISSAL 207
+F +M D P+ TI S+++A + L DL G LH + +S + T I +AL
Sbjct: 262 IFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNAL 321
Query: 208 VDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN------DMFREALRLFVAMHR 261
+DMY + ++ A+++F + D+ W +I L + +MF E RL V
Sbjct: 322 IDMYAKCGSIDRAIEVF-RGVKDRDLSTWNTLIVGLALHHAEGSIEMFEEMQRLKVW--- 377
Query: 262 GCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGL-GICGNVVVESSLLDMYGKCGKV 320
P+ TF ++ AC++ G + +G++ + + + I N+ ++DM G+ G++
Sbjct: 378 -----PNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQL 432
Query: 321 GQARVVFDRLG-DKNSVSWTAMLSA 344
+A + + + + N++ W +L A
Sbjct: 433 EEAFMFVESMKIEPNAIVWRTLLGA 457
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 134/342 (39%), Gaps = 80/342 (23%)
Query: 275 LLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKC----GKVGQARVVFDRL 330
L C N+ R K++HA +V G+ N+ V L+ Y G + A +FD +
Sbjct: 18 LWQNCKNI---RTLKQIHASMVVNGLMSNLSVVGELI--YSASLSVPGALKYAHKLFDEI 72
Query: 331 GDKNSVSWTAMLSAYCQNKEYEAVFELVRE---RGVS-DLYAFGTVLRACSGVAAVMLGK 386
+ +L Q+ + E L E RGVS D Y F VL+ACS + G
Sbjct: 73 PKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGF 132
Query: 387 EVHCQYVRKGGWRDVIVESALV-------DL------------------------YAKCG 415
H + VR G + V++AL+ DL YAK G
Sbjct: 133 AFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRG 192
Query: 416 CVDFAQRLFLSMEVRNQ-------------------------------ITWNAMIGGLAQ 444
+D A RLF M ++Q +TWNAMI G
Sbjct: 193 KIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVN 252
Query: 445 NGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKP--- 501
G E L +F++M G PD +T + +L AC+ G ++ G+R +++ +
Sbjct: 253 CGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIY 312
Query: 502 -GVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLL 542
G +N +ID+ + I+ A + R D S W L+
Sbjct: 313 VGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR-DLSTWNTLI 353
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 184/405 (45%), Gaps = 50/405 (12%)
Query: 137 LISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRG 196
L++ + R + +L +M+ L EP+ T S++ + + + ++ G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 197 FHSNTVISSALVDMYGRNRAVRDALKLFDESPEP---EDVVGWTAIISTLTRNDMFREAL 253
+ N VI + ++D +++ V +AL L + + DVV + ++IS L + + +A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 254 RLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDM 313
R+ M + + PD FTF L+ AC G + + +E + +++ + ++V S L+
Sbjct: 242 RMVSCMTKR-EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI-- 298
Query: 314 YGKC--GKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLY 367
YG C ++ +A +F + K + V+++ +++ YC++K+ E
Sbjct: 299 YGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH-------------- 344
Query: 368 AFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSM 427
G ++ C+ ++G R+ + + L+ Y + G ++ A+ +F M
Sbjct: 345 -----------------GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Query: 428 EV----RNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITF-IGVLFACSHTGL 482
N IT+N ++ GL NG+ + L + DM K GM+ D +T+ I + C +
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEV 447
Query: 483 VDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLE 527
D Y +L G+ P + Y M+ L + + EA++L
Sbjct: 448 ADAWDIYCSLNCQ--GLMPDIWTYTTMMLGLYKKGLRREADALFR 490
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 149/327 (45%), Gaps = 17/327 (5%)
Query: 251 EALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSL 310
++L LF M + C +P F LL+A + + L ++ LGI N+ + L
Sbjct: 64 DSLDLFFHMVQ-CRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122
Query: 311 LDMYGKCGKVGQARVVFDR---LGDKNS-VSWTAMLSAYCQ-NKEYEAVFELVRERGV-- 363
L+ + +C ++ A + LG + S V++ ++L+ +C+ ++ Y+A++ + G+
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182
Query: 364 -SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQR 422
++ + T++ V ++ + + G DV+ ++L+ G A R
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 423 LFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACS 478
+ M R + T+NA+I + GR +E E +E+MI+ ++PD +T+ +++
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 479 HTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCR---YDH 535
+DE F MV + G P V Y+ +I+ +++ +E L R +
Sbjct: 303 MYSRLDEAEEMFGFMVSK-GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 536 SLWAVLLGACTKCSDYVTAERVARKMI 562
+ +L+ + AE + R+M+
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMV 388
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 145/340 (42%), Gaps = 19/340 (5%)
Query: 39 CKDGSLRQALHLLNTS-QTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHS 97
C+ + AL++ + PN+ V+Y +++ K+ + L K GI
Sbjct: 162 CRGDRVYDALYMFDQMVGMGYKPNV--VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGP 219
Query: 98 DRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVR----DIIAWTSLISAYTRAGRPINSLQL 153
D NSL++ G A + + R D+ + +LI A + GR + +
Sbjct: 220 DVVTYNSLISGLCSSG-RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 154 FSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGR 213
+ +M+ ++P+ T S +I L + ++S+G + V S L++ Y +
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 214 NRAVRDALKLFDESPEP---EDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGF 270
++ V +KLF E + + V +T +I R A +F M CG+ P+
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM-VFCGVHPNII 397
Query: 271 TFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRL 330
T+ LL + G + + + A + G+ ++V + ++ K G+V A ++ L
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457
Query: 331 GDKNSVS--W---TAMLSAYCQ--NKEYEAVFELVRERGV 363
+ + W T ML Y + +E +A+F ++E G+
Sbjct: 458 NCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGI 497
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 7/226 (3%)
Query: 342 LSAYCQNKEYEAVFELVR----ERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGG 397
L + C+ + + E+++ E V DL + + C A+ K VH G
Sbjct: 153 LDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVG 212
Query: 398 WRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFED 457
D+ ++++++Y+ CG V+ A +F SM RN TW +I A+NG+G + ++ F
Sbjct: 213 ISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSR 272
Query: 458 MIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAE 517
+EG +PD F + FAC G ++EG +F M EYGI P +EHY ++ +L
Sbjct: 273 FKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPG 332
Query: 518 MIEEAESLLENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIE 563
++EA +E+ + D LW L+ D + +R + M+E
Sbjct: 333 YLDEALRFVESMEPNVD--LWETLMNLSRVHGDLILGDR-CQDMVE 375
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 111/476 (23%), Positives = 201/476 (42%), Gaps = 55/476 (11%)
Query: 71 LQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQ---------- 120
L+ C S G + + L+SG+HS +F N LTL+ + P
Sbjct: 33 LRICN--SRAFSGRSDYRERLRSGLHSIKF--NDALTLFCDMAESHPLPSIVDFSRLLIA 88
Query: 121 -----------TLFDSLAV----RDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPN 165
+LF L + D+ ++T+LI + R R +L +M+ L EP+
Sbjct: 89 IAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPS 148
Query: 166 AFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMY---GRNRAVRDALK 222
T S++ + L ++ G+ N VI + ++D G+ D LK
Sbjct: 149 IVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLK 208
Query: 223 LFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANL 282
+ DVV + ++I+ L + + + R+ M R G+ PD TF L+
Sbjct: 209 HMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMR-MGISPDVITFSALIDVYGKE 267
Query: 283 GWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSW 338
G L + K+ + +++ + N+V +SL++ G + +A+ V + L K N+V++
Sbjct: 268 GQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTY 327
Query: 339 TAMLSAYCQNKEYE---AVFELVRERGVS-DLYAFGTVLRA-CSG----VAAVMLGKEVH 389
+++ YC+ K + + ++ GV D + + T+ + C A +LG+ V
Sbjct: 328 NTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVS 387
Query: 390 CQYVRKGGWRDVIVESALVDLYAKCGCVDFA----QRLFLSMEVRNQITWNAMIGGLAQN 445
C G D+ + L+D G + A + L S V IT+N +I GL +
Sbjct: 388 C-----GVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKA 442
Query: 446 GRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKP 501
+ + LF + +G+ PD IT+I ++ L E + M E G+ P
Sbjct: 443 DKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 132/316 (41%), Gaps = 62/316 (19%)
Query: 59 DPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQ 118
+PN+ V+Y +++ + + + H K GI D NSL+T G
Sbjct: 181 EPNV--VIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 119 AQTLFDSLAV---RDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITA 175
A+ L D + + D+I +++LI Y + G+ + + + +++M+ + PN T +S+I
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLIN- 297
Query: 176 ASKLRDLALGACLHAM----------VISRGFHSNTVISSALVDMYGRNRAVRDALKLFD 225
G C+H + ++S+GF N V + L++ Y + + V D +K
Sbjct: 298 ---------GLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMK--- 345
Query: 226 ESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWL 285
I+ ++R+ G+ D FT+ TL G
Sbjct: 346 -------------ILCVMSRD-----------------GVDGDTFTYNTLYQGYCQAGKF 375
Query: 286 RQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSV----SWTAM 341
+++ ++V G+ ++ + LLD GK+G+A V + L +V ++ +
Sbjct: 376 SAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNII 435
Query: 342 LSAYCQNKEYEAVFEL 357
+ C+ + E + L
Sbjct: 436 IKGLCKADKVEDAWYL 451
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 336 VSWTAMLSAYCQNKEYEAVFELVRER---GVS-DLYAFGTVLRACSGVAAVMLGKEVHCQ 391
V ++ +L A + +YEAV L R G+S DLY+F T++ A + L +
Sbjct: 80 VDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGK 139
Query: 392 YVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEV------RNQITWNAMIGGLAQN 445
++ G ++ +LV+ + C F + + L ++ N + +N +I L +
Sbjct: 140 MMKLGFEPSIVTFGSLVNGF--CHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEK 197
Query: 446 GRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEH 505
G+ L++ + M K G+ PD +T+ ++ H+G R + M+ GI P V
Sbjct: 198 GQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM-RMGISPDVIT 256
Query: 506 YNCMIDLLGRAEMIEEAE 523
++ +ID+ G+ + EA+
Sbjct: 257 FSALIDVYGKEGQLLEAK 274
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 131/545 (24%), Positives = 235/545 (43%), Gaps = 49/545 (8%)
Query: 101 VGNSLLTLYLKLGP------------------HLPQAQTLFDSLAVR----DIIAWTSLI 138
V + LL+L L GP + +A LF + R D+IA+++LI
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 139 SAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFH 198
Y +AG +LFSQ L ++ + SS I K DLA + ++ ++ +G
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 199 SNTVISSALVDMYGRNRAVRDALKLFDE----SPEPEDVVGWTAIISTLTRNDMFREALR 254
N V + L+ ++ + +A ++ + EP +V ++++I + R
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS-IVTYSSLIDGFCKCGNLRSGFA 447
Query: 255 LFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMY 314
L+ M + G PD +G L+ + G + K++G I NVVV +SL+D +
Sbjct: 448 LYEDMIK-MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 315 GKCGKVGQARVVFDRL---GDKNSVS--WTAMLSAYCQNKEYEAVFELVR--ERGVS-DL 366
+ + +A VF + G K V+ T M + + + EA+F R + G+ D
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDA 566
Query: 367 YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLS 426
A+ T++ A +G ++ R D+ V + ++ L KC ++ A + F +
Sbjct: 567 LAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 626
Query: 427 -----MEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG 481
ME + +T+N MI G R E +FE + P+ +T ++
Sbjct: 627 LIEGKME-PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNN 685
Query: 482 LVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCR-YDHSL--W 538
+D R F++M E G KP Y C++D ++ IE + L E + S+ +
Sbjct: 686 DMDGAIRMFSIMA-EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 744
Query: 539 AVLLGACTKCSDYVTAERVARKMIE--LEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLME 596
++++ K A + + I+ L PD ++Y +L Y VGR +A + + M
Sbjct: 745 SIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV-VAYAILIRGYCKVGRLVEAALLYEHML 803
Query: 597 DRGVK 601
GVK
Sbjct: 804 RNGVK 808
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 196/431 (45%), Gaps = 28/431 (6%)
Query: 188 LHAMVISRGFH-----SNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIST 242
H +V+ RGF N V+ VD A R + D P P V T I
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLKGLSVDQI--EVASRLLSLVLDCGPAPNVVTFCTLINGF 296
Query: 243 LTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICG 302
R +M R A LF M + G+ PD + TL+ G L G +L ++ + G+
Sbjct: 297 CKRGEMDR-AFDLFKVMEQR-GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKL 354
Query: 303 NVVVESSLLDMYGKCGKVGQARVVFDRL----GDKNSVSWTAMLSAYCQN-KEYEA--VF 355
+VVV SS +D+Y K G + A VV+ R+ N V++T ++ CQ+ + YEA ++
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 356 ELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKC 414
+ +RG+ + + +++ + G ++ ++ G DV++ LVD +K
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ 474
Query: 415 GCVDFAQRLFLSM---EVR-NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITF 470
G + A R + M +R N + +N++I G + R E L++F M G++PD TF
Sbjct: 475 GLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Query: 471 IGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLG---RAEMIEEAESLLE 527
V+ G ++E F M + G++P Y +ID + + + L++
Sbjct: 535 TTVMRVSIMEGRLEEALFLFFRMF-KMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQ 593
Query: 528 NADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIE--LEPDFHLSYVLLGNIYRAVGRW 585
D ++ V++ KC A + +IE +EPD ++Y + Y ++ R
Sbjct: 594 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI-VTYNTMICGYCSLRRL 652
Query: 586 NDAMEIRKLME 596
++A I +L++
Sbjct: 653 DEAERIFELLK 663
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 114/518 (22%), Positives = 210/518 (40%), Gaps = 94/518 (18%)
Query: 39 CKDGSLRQALHLLNT-SQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHS 97
CK G + +A L Q ++P+L + Y++L+ K G L + AL G+
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDL--IAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKL 354
Query: 98 DRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVR----DIIAWTSLISAYTRAGRPINSLQL 153
D V +S + +Y+K G L A ++ + + +++ +T LI + GR + +
Sbjct: 355 DVVVFSSTIDVYVKSG-DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGM 413
Query: 154 FSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGR 213
+ Q+L MEP+ T SS+I K +L G L+ +I G+ + VI LVD +
Sbjct: 414 YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 214 N----RAVRDALKL------------------------FDESPE----------PEDVVG 235
A+R ++K+ FDE+ + DV
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 236 WTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKV 295
+T ++ EAL LF M + GL PD + TL+ A G +L +
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFK-MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM 592
Query: 296 VGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRL----GDKNSVSWTAMLSAYCQNK-- 349
I ++ V + ++ + KC ++ A F+ L + + V++ M+ YC +
Sbjct: 593 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 652
Query: 350 -EYEAVFELVR-----------------------------------ERGVS-DLYAFGTV 372
E E +FEL++ E+G + +G +
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 712
Query: 373 LRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLF-LSMEVR- 430
+ S + ++ + KG ++ S ++D K G VD A +F +++ +
Sbjct: 713 MDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKL 772
Query: 431 --NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPD 466
+ + + +I G + GR E L+E M++ G++PD
Sbjct: 773 LPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 185/417 (44%), Gaps = 25/417 (5%)
Query: 131 IIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHA 190
I+ SL++ + R ++ L QM+++ +P+ T ++++ + + L
Sbjct: 145 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 204
Query: 191 MVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPE---DVVGWTAIISTLTRND 247
++ +G + V A+++ + AL L ++ + + DVV + II L +
Sbjct: 205 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK 264
Query: 248 MFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVE 307
+A LF M G+ PD FT+ L++ N G L + ++ I ++V
Sbjct: 265 HMDDAFDLFNKMETK-GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFF 323
Query: 308 SSLLDMYGKCGKVGQARVVFDRLGDK-----NSVSWTAMLSAYCQNKEYEAVFELVRE-- 360
++L+D + K GK+ +A ++D + + V++ ++ +C+ K E E+ RE
Sbjct: 324 NALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 361 -RG-VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
RG V + + T++ + V Q V G D++ + L+D G V+
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVE 443
Query: 419 FAQRLFLSMEVRNQ----ITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVL 474
A +F M+ R+ +T+ MI L + G+ + +LF + +G++P+ +T+ ++
Sbjct: 444 TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Query: 475 FACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMI-------DLLGRAEMIEEAES 524
GL +E F M E G P YN +I D AE+I+E S
Sbjct: 504 SGFCRKGLKEEADALFVEM-KEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRS 559
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/368 (19%), Positives = 157/368 (42%), Gaps = 45/368 (12%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
D++ + ++I + ++ LF++M ++P+ FT + +I+ + + L
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMF 249
+ ++ + + + V +AL+D + + + +A KL+DE
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDE----------------------- 345
Query: 250 REALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESS 309
M + PD + TL+ + +G E+ ++ G+ GN V ++
Sbjct: 346 ---------MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTT 396
Query: 310 LLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYEA---VFELVRERG 362
L+ + + A++VF ++ + +++ +L C N E VFE +++R
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD 456
Query: 363 VS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
+ D+ + T++ A V G ++ C KG +V+ + ++ + + G + A
Sbjct: 457 MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 422 RLFLSME----VRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFAC 477
LF+ M+ + N T+N +I ++G EL ++M G D TF G++
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNM 575
Query: 478 SHTGLVDE 485
H G +D+
Sbjct: 576 LHDGRLDK 583
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 179/410 (43%), Gaps = 36/410 (8%)
Query: 219 DALKLFDE----SPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGT 274
DA+ LF + P P +V ++ ++S + + + F + L M + G+ + +T+
Sbjct: 58 DAIGLFGDMVKSRPFPS-IVEFSKLLSAIAKMNKFDLVISLGEQM-QNLGISHNLYTYSI 115
Query: 275 LLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGD-- 332
+ L + K++ LG ++V +SLL+ + ++ +A + D++ +
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 333 --KNSVSWTAMLSAYCQ-NKEYEAVF---ELVRERGVSDLYAFGTVL-----RACSGVAA 381
++V++T ++ Q NK EAV +V + DL +G V+ R +A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 382 VMLGKEVHCQYVRKGGWR-DVIVESALVDLYAKCGCVDFAQRLFLSMEVR----NQITWN 436
+L K + KG DV++ + ++D K +D A LF ME + + T+N
Sbjct: 236 NLLNK------MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 437 AMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDE 496
+I L GR ++ L DM+++ + PD + F ++ A G + E + + MV
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349
Query: 497 YGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCR---YDHSLWAVLLGACTKCSDYVT 553
P V YN +I + + +EE + R + + L+ + D
Sbjct: 350 KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 409
Query: 554 AERVARKMIE--LEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
A+ V ++M+ + PD +LL + G A+ + + M+ R +K
Sbjct: 410 AQMVFKQMVSDGVHPDIMTYNILLDGLCNN-GNVETALVVFEYMQKRDMK 458
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 20/260 (7%)
Query: 39 CKDGSLRQALHLLNTSQTTLDPNLKP--VLYASLLQTCTKTSSFLHGTTLHAHALKSGIH 96
CK + A L N +T +KP Y L+ + + L + L+ I+
Sbjct: 261 CKYKHMDDAFDLFNKMETK---GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 97 SDRFVGNSLLTLYLKLGPHLPQAQTLFDSLA-----VRDIIAWTSLISAYTRAGRPINSL 151
D N+L+ ++K G L +A+ L+D + D++A+ +LI + + R +
Sbjct: 318 PDLVFFNALIDAFVKEG-KLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGM 376
Query: 152 QLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMY 211
++F +M + N T +++I + RD + ++S G H + + + L+D
Sbjct: 377 EVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGL 436
Query: 212 GRNRAVRDALKLFDESPEPE---DVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPD 268
N V AL +F+ + + D+V +T +I L + + LF ++ G+ P+
Sbjct: 437 CNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK-GVKPN 495
Query: 269 GFTFGTLLAACANLGWLRQG 288
T+ T+++ G+ R+G
Sbjct: 496 VVTYTTMMS-----GFCRKG 510
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 184/447 (41%), Gaps = 77/447 (17%)
Query: 93 SGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVR----DIIAWTSLISAYTRAGRPI 148
+G F N ++ K G + A+ LF+ + R D + + S+I + + GR
Sbjct: 256 AGARPTVFTYNIMIDCMCKEG-DVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 149 NSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALV 208
+++ F +M D+ EP+ T +++I K L +G + + G N V S LV
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 209 DMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPD 268
D + + M ++A++ +V M R GLVP+
Sbjct: 375 DAF--------------------------------CKEGMMQQAIKFYVDMRR-VGLVPN 401
Query: 269 GFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFD 328
+T+ +L+ A +G L L +++ +G+ NVV ++L+D ++ +A +F
Sbjct: 402 EYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFG 461
Query: 329 RLGD----KNSVSWTAMLSAYCQNKEYEAVFELVRE---RGVS-DLYAFGTVLRACSGVA 380
++ N S+ A++ + + K + EL+ E RG+ DL +GT + +
Sbjct: 462 KMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLE 521
Query: 381 AVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIG 440
+ K V + G + ++ + L+D Y K
Sbjct: 522 KIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK--------------------------- 554
Query: 441 GLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIK 500
+G TE L L ++M + +E +TF ++ LV + YF + +++G++
Sbjct: 555 ----SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQ 610
Query: 501 PGVEHYNCMIDLLGRAEMIEEAESLLE 527
+ MID L + +E A +L E
Sbjct: 611 ANAAIFTAMIDGLCKDNQVEAATTLFE 637
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 197/469 (42%), Gaps = 25/469 (5%)
Query: 39 CKDGSLRQALHLLNTSQTT-LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHS 97
CK+G + A L + L P+ V Y S++ K
Sbjct: 273 CKEGDVEAARGLFEEMKFRGLVPD--TVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEP 330
Query: 98 DRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVR----DIIAWTSLISAYTRAGRPINSLQL 153
D N+L+ + K G LP + + +++++++L+ A+ + G +++
Sbjct: 331 DVITYNALINCFCKFG-KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 389
Query: 154 FSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGR 213
+ M + + PN +T +S+I A K+ +L+ L ++ G N V +AL+D
Sbjct: 390 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Query: 214 NRAVRDALKLF---DESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGF 270
+++A +LF D + ++ + A+I + AL L + +G G+ PD
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL-KGRGIKPDLL 508
Query: 271 TFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRL 330
+GT + +L + K + ++ GI N ++ ++L+D Y K G + + D +
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 331 GDKN----SVSWTAMLSAYCQNKEY-EAVFELVRERGVSDLYA----FGTVLRACSGVAA 381
+ + V++ ++ C+NK +AV R L A F ++
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ 628
Query: 382 VMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSM-EV---RNQITWNA 437
V + Q V+KG D ++L+D K G V A L M E+ + + + +
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 688
Query: 438 MIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEG 486
++ GL+ + + E+MI EG+ PD + I VL G +DE
Sbjct: 689 LVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEA 737
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/496 (19%), Positives = 223/496 (44%), Gaps = 21/496 (4%)
Query: 33 SEILQHCKDGSLRQALHLLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALK 92
S I HCK+ L AL L + + P+ V ++ L++ K +
Sbjct: 344 SLITGHCKNNDLVSALVLFDKMEKE-GPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEV 402
Query: 93 SGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDS---LAVRDIIAWTSLISAYTRAGRPIN 149
G+ F ++++ +LK H +A LFD + ++ +++S + G+
Sbjct: 403 LGLTPSVFHVHTIIQGWLKGQKH-EEALKLFDESFETGLANVFVCNTILSWLCKQGKTDE 461
Query: 150 SLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVD 209
+ +L S+M + PN + ++V+ + +++ L + + ++ +G N S L+D
Sbjct: 462 ATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILID 521
Query: 210 MYGRNRAVRDALKLFDESPEPE---DVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLV 266
RN ++AL++ + + V + II+ L + +A L M L
Sbjct: 522 GCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLC 581
Query: 267 PDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVV 326
++ +++ G + + ++ G GI NV+ +SL++ K ++ QA +
Sbjct: 582 VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEM 641
Query: 327 FDRLGDK----NSVSWTAMLSAYCQNKEYE---AVFELVRERGVSDLYA-FGTVLRACSG 378
D + +K + ++ A++ +C+ E A+F + E G++ + +++
Sbjct: 642 RDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRN 701
Query: 379 VAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSME----VRNQIT 434
+ ++ +++ + ++ G D+ + L+D K G + A L+ M+ V ++I
Sbjct: 702 LGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEII 761
Query: 435 WNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMV 494
+ ++ GL++ G+ +V+++FE+M K + P+ + + V+ G +DE R M+
Sbjct: 762 YTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML 821
Query: 495 DEYGIKPGVEHYNCMI 510
D+ GI P ++ ++
Sbjct: 822 DK-GILPDGATFDILV 836
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 177/401 (44%), Gaps = 33/401 (8%)
Query: 133 AWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMV 192
+TS+I A + G ++++L +ML + N +S+IT K DL L +
Sbjct: 306 TYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKM 365
Query: 193 ISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWT-------AIISTLTR 245
G N+V S L++ + +N + AL+ + + +V+G T II +
Sbjct: 366 EKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKM----EVLGLTPSVFHVHTIIQGWLK 421
Query: 246 NDMFREALRLF-VAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNV 304
EAL+LF + G V F T+L+ G + EL +K+ GI NV
Sbjct: 422 GQKHEEALKLFDESFETGLANV---FVCNTILSWLCKQGKTDEATELLSKMESRGIGPNV 478
Query: 305 VVESSLLDMYGKCGKVGQ--ARVVFDRLGDK----NSVSWTAMLSAYCQNKEYEAVFELV 358
V +++ M G C + AR+VF + +K N+ +++ ++ +N + + E+V
Sbjct: 479 VSYNNV--MLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536
Query: 359 RERGVSDLYAFG----TVLRACSGVAAVMLGKEVHCQYV-RKGGWRDVIVESALVDLYAK 413
S++ G T++ V +E+ + K + ++++D + K
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFK 596
Query: 414 CGCVDFAQRLFLSM----EVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYIT 469
G +D A + M N IT+ +++ GL +N R + LE+ ++M +G++ D
Sbjct: 597 EGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPA 656
Query: 470 FIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMI 510
+ ++ ++ F+ +++E G+ P YN +I
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEE-GLNPSQPIYNSLI 696
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 183/459 (39%), Gaps = 75/459 (16%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGAC-- 187
D + L+ A R +P +L++ S+ ++ EP++ S + A K DLA+
Sbjct: 232 DNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLL 291
Query: 188 ----------------------------------LHAMVISRGFHSNTVISSALVDMYGR 213
L ++S G N V +++L+ + +
Sbjct: 292 REMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCK 351
Query: 214 NRAVRDALKLFD----ESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDG 269
N + AL LFD E P P V ++ +I +N +AL + M GL P
Sbjct: 352 NNDLVSALVLFDKMEKEGPSPNSVT-FSVLIEWFRKNGEMEKALEFYKKMEV-LGLTPSV 409
Query: 270 FTFGTLLAACANLGWLRQGK-----ELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQAR 324
F T++ GWL+ K +L + G+ NV V +++L K GK +A
Sbjct: 410 FHVHTIIQ-----GWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEAT 463
Query: 325 VVFDRLGDK----NSVSWTAMLSAYCQNKEYE---AVFELVRERGVS-DLYAFGTVLRAC 376
+ ++ + N VS+ ++ +C+ K + VF + E+G+ + Y + ++ C
Sbjct: 464 ELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGC 523
Query: 377 SGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQI--- 433
EV + +V +++ K G A+ L +M ++
Sbjct: 524 FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVS 583
Query: 434 --TWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFA 491
++N++I G + G + +E+M G+ P+ IT+ ++ GL R A
Sbjct: 584 CMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM-----NGLCKNNRMDQA 638
Query: 492 L-MVDEY---GIKPGVEHYNCMIDLLGRAEMIEEAESLL 526
L M DE G+K + Y +ID + +E A +L
Sbjct: 639 LEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALF 677
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 105/499 (21%), Positives = 216/499 (43%), Gaps = 42/499 (8%)
Query: 133 AWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMV 192
A+ L++AY++ + +++ + +QML+LD+ P ++ ++A + L L++ +
Sbjct: 165 AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRM 224
Query: 193 ISRGFHSNTVISSALVDMYGRNRAVRDALKLF----DESPEPEDVVGWTAIISTLTRNDM 248
++ G + V + L+ R +AL++ + EP+ ++ A+ + D+
Sbjct: 225 VAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDL 284
Query: 249 FREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVES 308
A L M VP T+ +++ A G + L +++ GI NVV +
Sbjct: 285 AM-ANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAAT 343
Query: 309 SLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYEAVFELVRERGVS 364
SL+ + K + A V+FD++ + NSV+++ ++ + +N E E E ++ V
Sbjct: 344 SLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVL 403
Query: 365 DLYAFGTVLRACSGVAAVMLGKEVHCQYVR------KGGWRDVIVESALVDLYAKCGCVD 418
L +V + + + G++ H + ++ + G +V V + ++ K G D
Sbjct: 404 GLTP--SVFHVHTIIQGWLKGQK-HEEALKLFDESFETGLANVFVCNTILSWLCKQGKTD 460
Query: 419 FAQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVL 474
A L ME R N +++N ++ G + +F +++++G++P+ T+ ++
Sbjct: 461 EATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILI 520
Query: 475 FACSHTGLVDEGRRYFALMVDEYGIKPGVE----HYNCMIDLLGRAEMIEEAESLLEN-- 528
C DE AL V + +E Y +I+ L + +A LL N
Sbjct: 521 DGCFRNH--DEQN---ALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575
Query: 529 ------ADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLSYVLLGNIYRAV 582
C +S+ S E + I P+ ++Y L N
Sbjct: 576 EEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGI--SPNV-ITYTSLMNGLCKN 632
Query: 583 GRWNDAMEIRKLMEDRGVK 601
R + A+E+R M+++GVK
Sbjct: 633 NRMDQALEMRDEMKNKGVK 651
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/525 (19%), Positives = 212/525 (40%), Gaps = 29/525 (5%)
Query: 68 ASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPH---LPQAQTLFD 124
+++L C + A G N+LL ++ K G + L + + +
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 125 SLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLAL 184
+ D + + L++AY RAG + + M + PNA T ++VI A K
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 185 GACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDE------SPEPEDVVGWTA 238
L + G NT +A++ + G+ + +K+ + SP + W
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSP---NRATWNT 461
Query: 239 IISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGL 298
+++ M + R+F M + CG PD TF TL++A G +++ ++
Sbjct: 462 MLALCGNKGMDKFVNRVFREM-KSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRA 520
Query: 299 GICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEY--- 351
G V ++LL+ + G V + K S++ ML Y + Y
Sbjct: 521 GFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGI 580
Query: 352 EAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR-DVIVESALVDL 410
E + ++E + + L + + G E +K G++ D+++ ++++ +
Sbjct: 581 ERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSI 640
Query: 411 YAKCGCVDFAQRLFLSME----VRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPD 466
+ + D A+ + S+ + +T+N+++ + G + E+ + + K ++PD
Sbjct: 641 FTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPD 700
Query: 467 YITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLL 526
+++ V+ GL+ E R + M E GI+P + YN + M E E ++
Sbjct: 701 LVSYNTVIKGFCRRGLMQEAVRMLSEMT-ERGIRPCIFTYNTFVSGYTAMGMFAEIEDVI 759
Query: 527 E---NADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDF 568
E DCR + + +++ + Y A K+ +P F
Sbjct: 760 ECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCF 804
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 115/545 (21%), Positives = 232/545 (42%), Gaps = 67/545 (12%)
Query: 119 AQTLFDSLAVR----DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEP---------- 164
A L D + ++ D+ A+T+++ AY+R G+ ++ LF +M ++ P
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 165 --------------------------NAFTISSVITAASKLRDLALGACLHAMVISRGFH 198
+ FT S+V++A ++ L A + S G+
Sbjct: 254 VFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYE 313
Query: 199 SNTVISSALVDMYGRNRAVRDALKLFDESPE---PEDVVGWTAIISTLTRNDMFREALRL 255
TV +AL+ ++G+ +AL + E E P D V + +++ R +EA +
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 256 FVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYG 315
M + G++P+ T+ T++ A G + +L + G N +++L + G
Sbjct: 374 IEMMTKK-GVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLG 432
Query: 316 KCGKVGQA-RVVFDRLGD---KNSVSWTAMLSAYCQNKEYEA----VFELVRERGVS-DL 366
K + + +++ D + N +W ML A C NK + VF ++ G D
Sbjct: 433 KKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDR 491
Query: 367 YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLS 426
F T++ A + + +++ + R G V +AL++ A+ G + +
Sbjct: 492 DTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISD 551
Query: 427 MEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEG-MEPDYITFIGVLFACSHTG 481
M+ + + +++ M+ A+ G + E E+ IKEG + P ++ +L A
Sbjct: 552 MKSKGFKPTETSYSLMLQCYAKGGNYLGI-ERIENRIKEGQIFPSWMLLRTLLLANFKCR 610
Query: 482 LVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENA---DCRYDHSLW 538
+ R F L ++G KP + +N M+ + R M ++AE +LE+ D +
Sbjct: 611 ALAGSERAFTLF-KKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTY 669
Query: 539 AVLLGACTKCSDYVTAERVARKM--IELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLME 596
L+ + + AE + + + +L+PD +SY + + G +A+ + M
Sbjct: 670 NSLMDMYVRRGECWKAEEILKTLEKSQLKPDL-VSYNTVIKGFCRRGLMQEAVRMLSEMT 728
Query: 597 DRGVK 601
+RG++
Sbjct: 729 ERGIR 733
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/488 (22%), Positives = 215/488 (44%), Gaps = 53/488 (10%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
+I + +++ Y + G + Q S++++ ++P+ FT +S+I + +DL +
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 276
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPE---DVVGWTAIISTLTRN 246
+ +G N V + L+ R + +A+ LF + + E V +T +I +L +
Sbjct: 277 NEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS 336
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
+ EAL L M G+ P+ T+ L+ + + + +EL +++ G+ NV+
Sbjct: 337 ERKSEALNLVKEMEET-GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYEAVFELVRERG 362
++L++ Y K G + A V + + + N+ ++ ++ YC++ ++A+
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAM-------- 447
Query: 363 VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQR 422
GV ML ++V DV+ ++L+D + G D A R
Sbjct: 448 ---------------GVLNKMLERKV---------LPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 423 LFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACS 478
L M R +Q T+ +MI L ++ R E +LF+ + ++G+ P+ + + ++
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 479 HTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRY----D 534
G VDE M+ + + P +N +I L ++EA +LLE +
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCL-PNSLTFNALIHGLCADGKLKEA-TLLEEKMVKIGLQPT 601
Query: 535 HSLWAVLLGACTKCSDYVTAERVARKMIE--LEPDFHLSYVLLGNIYRAVGRWNDAMEIR 592
S +L+ K D+ A ++M+ +PD H +Y Y GR DA ++
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAH-TYTTFIQTYCREGRLLDAEDMM 660
Query: 593 KLMEDRGV 600
M + GV
Sbjct: 661 AKMRENGV 668
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 200/455 (43%), Gaps = 48/455 (10%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
+I +T LI + + + +L QML+ + PN T +++I K + +
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPE---DVVGWTAIISTLTRN 246
++ SR NT + L+ Y ++ V A+ + ++ E + DVV + ++I R+
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
F A RL M+ GLVPD +T+ +++ + + + +L + G+ NVV+
Sbjct: 476 GNFDSAYRLLSLMNDR-GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 534
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQN---KEYEAVFELVR 359
++L+D Y K GKV +A ++ +++ K NS+++ A++ C + KE + E +
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 360 ERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVR------KGGWRDVIVESALVDLYAK 413
+ G+ + T+L + ++ + Y R G D + + Y +
Sbjct: 595 KIGLQPTVSTDTIL-----IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCR 649
Query: 414 CGCVDFAQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYIT 469
G + A+ + M + T++++I G G+ ++ + M G EP T
Sbjct: 650 EGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHT 709
Query: 470 FIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNC-MIDLLGRAEMIEEAESLLEN 528
F+ ++ H L+ +YG + G E C M +++ ++E E ++E+
Sbjct: 710 FLSLI---KH------------LLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEH 754
Query: 529 ADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIE 563
+ S ++LG C V RVA K+ +
Sbjct: 755 SVTPNAKSYEKLILGICE-----VGNLRVAEKVFD 784
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 210/494 (42%), Gaps = 37/494 (7%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSL 126
Y+ L+ + S + A +K G D NSLL + G + A +L +
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCH-GNRISDAVSLVGQM 177
Query: 127 A----VRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDL 182
D + +LI R R ++ L +M+ +P+ T V+ K D+
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 183 ALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEP---EDVVGWTAI 239
L L + VI + ++D + V DAL LF E +VV + ++
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 240 ISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLG 299
I L + +A RL M + P+ TF L+ A G L + ++L+ +++
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 300 ICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYEAVF 355
I ++ SSL++ + ++ +A+ +F+ + K N V++ ++ +C+ K +
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 356 ELVRE---RG-VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLY 411
EL RE RG V + + T++ + V Q V G D++ S L+D
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Query: 412 AKCGCVDFAQRLFLSMEVRNQI-----TWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPD 466
G V+ A +F ++ R+++ T+N MI G+ + G+ + +LF + +G++P+
Sbjct: 477 CNNGKVETALVVFEYLQ-RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 467 YITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMI-------DLLGRAEMI 519
+T+ ++ GL +E F M +E G P YN +I D AE+I
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMKEE-GPLPDSGTYNTLIRAHLRDGDKAASAELI 594
Query: 520 EEAESLLENADCRY 533
E S CR+
Sbjct: 595 REMRS------CRF 602
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 158/350 (45%), Gaps = 20/350 (5%)
Query: 39 CKDGSLRQALHLLNTSQTT-LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHS 97
C ++ AL+L + PN+ V Y SL++ + + L + ++ I+
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNV--VTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 324
Query: 98 DRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVR----DIIAWTSLISAYTRAGRPINSLQL 153
+ ++L+ ++K G L +A+ L+D + R DI ++SLI+ + R + +
Sbjct: 325 NVVTFSALIDAFVKEG-KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 154 FSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGR 213
F M+ D PN T +++I K + + G L + RG NTV + L+ + +
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Query: 214 NRAVRDALKLFDESPEP---EDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGF 270
R +A +F + D++ ++ ++ L N AL +F + R + PD +
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS-KMEPDIY 502
Query: 271 TFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRL 330
T+ ++ G + G +L + G+ NVV ++++ + + G +A +F +
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Query: 331 GDK----NSVSWTAMLSAYCQNKEYEAVFELVRE----RGVSDLYAFGTV 372
++ +S ++ ++ A+ ++ + A EL+RE R V D G V
Sbjct: 563 KEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 612
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 202/451 (44%), Gaps = 54/451 (11%)
Query: 128 VRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGAC 187
V + + LI+ + R + +L L +M+ L EP+ T+SS++ + ++
Sbjct: 117 VHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 188 LHAMVISRGFHSNTVISSALVD-MYGRNRAVRDALKLFD--------------------- 225
L ++ G+ +T+ + L+ ++ N+A +A+ L D
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKA-SEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 226 ----------------ESPEPE-DVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPD 268
E+ + E DVV + II +L + +AL LF M G+ P+
Sbjct: 236 CKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPN 294
Query: 269 GFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFD 328
T+ +L++ + G +L + ++ I N+V ++L+D + K GK +A ++D
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 329 ----RLGDKNSVSWTAMLSAYCQNKEYEA---VFE-LVRERGVSDLYAFGTVLRACSGVA 380
R D + ++ ++++ +C + + +FE +V + D+ + T+++
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 381 AVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR----NQITWN 436
V G E+ + +G D + + L+ G D AQ++F M + +T++
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 474
Query: 437 AMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDE 496
++ GL NG+ + LE+F+ M K ++ D + ++ G VD+G F + +
Sbjct: 475 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 534
Query: 497 YGIKPGVEHYNCMIDLLGRAEMIEEAESLLE 527
G+KP V YN MI L +++EA +LL+
Sbjct: 535 -GVKPNVVTYNTMISGLCSKRLLQEAYALLK 564
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 153/355 (43%), Gaps = 49/355 (13%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
D++ + ++I + + ++L LF +M + PN T SS+I+ + + L
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDE----SPEPEDVVGWTAIISTLTR 245
+ +I + + N V +AL+D + + +A KL+D+ S +P D+ + ++++
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP-DIFTYNSLVNGFCM 377
Query: 246 NDMFREALRLFVAM-HRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNV 304
+D +A ++F M + C PD T+ TL+ + G EL ++ G+ G+
Sbjct: 378 HDRLDKAKQMFEFMVSKDC--FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Query: 305 VVESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYEAVFELVRE 360
V ++L+ G A+ VF ++ + ++++ +L C N + E E+
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF-- 493
Query: 361 RGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR-DVIVESALVDLYAKCGCVDF 419
Y++K + D+ + + +++ K G VD
Sbjct: 494 ------------------------------DYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Query: 420 AQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITF 470
LF S+ ++ N +T+N MI GL E L + M ++G P+ T+
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 179/440 (40%), Gaps = 62/440 (14%)
Query: 219 DALKLF----DESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGT 274
DA+ LF P P +V + ++S + + F + L M R +V +T+
Sbjct: 68 DAIGLFGGMVKSRPLPS-IVEFNKLLSAIAKMKKFDVVISLGEKMQR-LEIVHGLYTYNI 125
Query: 275 LLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGD-- 332
L+ + L K++ LG ++V SSLL+ Y ++ A + D++ +
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 333 --KNSVSWTAMLSA-YCQNKEYEAVFELVR--ERGVS-DLYAFGTVLRACSGVAAVMLGK 386
+++++T ++ + NK EAV + R +RG +L +G V+ L
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 387 EVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR---------------- 430
+ + DV++ + ++D K VD A LF ME +
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 431 -----------------------NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDY 467
N +T+NA+I + G+ E +L++DMIK ++PD
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 468 ITFIGVLFA-CSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLL 526
T+ ++ C H L D+ ++ F MV + P V YN +I +++ +E+ L
Sbjct: 366 FTYNSLVNGFCMHDRL-DKAKQMFEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 527 ENADCR---YDHSLWAVLLGACTKCSDYVTAERVARKMIE--LEPDFHLSYVLLGNIYRA 581
R D + L+ D A++V ++M+ + PD +LL +
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483
Query: 582 VGRWNDAMEIRKLMEDRGVK 601
G+ A+E+ M+ +K
Sbjct: 484 -GKLEKALEVFDYMQKSEIK 502
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 190/413 (46%), Gaps = 22/413 (5%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
DI+ +SL++ Y + R +++ L QM+++ +P+ FT +++I + L
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPE---DVVGWTAIISTLTRN 246
++ RG + V +V+ + + AL L ++ +VV + II +L +
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKY 271
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
A+ LF M G+ P+ T+ +L+ N G L + ++ I NVV
Sbjct: 272 RHVEVAVDLFTEMETK-GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT 330
Query: 307 ESSLLDMYGKCGKVGQARVVFD----RLGDKNSVSWTAMLSAYCQNK---EYEAVFE-LV 358
++L+D + K GK+ +A + + R D +++++ +++ +C + E + +F+ +V
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 359 RERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
+ + ++ + T++ V G E+ + ++G + + + ++ + + G D
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Query: 419 FAQRLFLSMEVRNQI-----TWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGV 473
AQ +F M V N++ T++ ++ GL G+ L +F+ + K ME + + +
Sbjct: 451 SAQMVFKQM-VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Query: 474 LFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLL 526
+ G V E F + IKP V YN MI L +++EA+ L
Sbjct: 510 IEGMCKAGKVGEAWDLFCSL----SIKPDVVTYNTMISGLCSKRLLQEADDLF 558
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/362 (19%), Positives = 145/362 (40%), Gaps = 67/362 (18%)
Query: 115 HLPQAQTLFDSLAVR----DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTIS 170
H+ A LF + + +++ + SLI+ GR ++ +L S ML+ + PN T +
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFN 332
Query: 171 SVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEP 230
++I A K L LH +I R +T+ + L++ + + + +A ++F
Sbjct: 333 ALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK----- 387
Query: 231 EDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKE 290
+ + C +P+ T+ TL+ + G E
Sbjct: 388 --------------------------FMVSKDC--LPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 291 LHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKE 350
L ++ G+ GN V ++++ + + G A++VF
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK---------------------- 457
Query: 351 YEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR-DVIVESALVD 409
++V R +D+ + +L + + +Y++K ++ + + +++
Sbjct: 458 -----QMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF-KYLQKSEMELNIFIYNTMIE 511
Query: 410 LYAKCGCVDFAQRLFLSMEVR-NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYI 468
K G V A LF S+ ++ + +T+N MI GL E +LF M ++G P+
Sbjct: 512 GMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSG 571
Query: 469 TF 470
T+
Sbjct: 572 TY 573
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 201/449 (44%), Gaps = 54/449 (12%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
++ + LI+ + R + +L L +M+ L EP+ T+SS++ + ++ L
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103
Query: 190 AMVISRGFHSNTVISSALVD-MYGRNRAVRDALKLFD----------------------- 225
++ G+ +T+ + L+ ++ N+A +A+ L D
Sbjct: 104 DQMVEMGYRPDTITFTTLIHGLFLHNKA-SEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 162
Query: 226 --------------ESPEPE-DVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGF 270
E+ + E DVV + II +L + +AL LF M G+ P+
Sbjct: 163 RGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVV 221
Query: 271 TFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFD-- 328
T+ +L++ + G +L + ++ I N+V ++L+D + K GK +A + D
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281
Query: 329 --RLGDKNSVSWTAMLSAYCQNKEYEA---VFE-LVRERGVSDLYAFGTVLRACSGVAAV 382
R D + ++ ++++ +C + + +FE +V + DL + T+++ V
Sbjct: 282 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 341
Query: 383 MLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR----NQITWNAM 438
G E+ + +G D + + L+ G D AQ++F M + +T++ +
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 401
Query: 439 IGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYG 498
+ GL NG+ + LE+F+ M K ++ D + ++ G VD+G F + + G
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK-G 460
Query: 499 IKPGVEHYNCMIDLLGRAEMIEEAESLLE 527
+KP V YN MI L +++EA +LL+
Sbjct: 461 VKPNVVTYNTMISGLCSKRLLQEAYALLK 489
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 175/427 (40%), Gaps = 58/427 (13%)
Query: 228 PEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQ 287
P P + + ++S + + F + L M R G+ + +T+ L+ +
Sbjct: 6 PLPS-IFEFNKLLSAIAKMKKFDLVISLGEKMQR-LGISHNLYTYNILINCFCRRSQISL 63
Query: 288 GKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGD----KNSVSWTAMLS 343
L K++ LG ++V SSLL+ Y ++ A + D++ + +++++T ++
Sbjct: 64 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 123
Query: 344 A-YCQNKEYEAVFELVR--ERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR 399
+ NK EAV + R +RG +L +G V+ + L + +
Sbjct: 124 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 183
Query: 400 DVIVESALVDLYAKCGCVDFAQRLFLSMEVR----------------------------- 430
DV++ + ++D K VD A LF ME +
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 431 ----------NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFA-CSH 479
N +T+NA+I + G+ E +L +DMIK ++PD T+ ++ C H
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 480 TGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCR---YDHS 536
L D+ ++ F MV + P ++ YN +I +++ +E+ L R D
Sbjct: 304 DRL-DKAKQMFEFMVSKDCF-PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 537 LWAVLLGACTKCSDYVTAERVARKMIE--LEPDFHLSYVLLGNIYRAVGRWNDAMEIRKL 594
+ L+ D A++V ++M+ + PD +LL + G+ A+E+
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN-GKLEKALEVFDY 420
Query: 595 MEDRGVK 601
M+ +K
Sbjct: 421 MQKSEIK 427
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 116/265 (43%), Gaps = 12/265 (4%)
Query: 39 CKDGSLRQALHLL-NTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHS 97
C G A LL + + ++PNL V + +L+ K F+ LH +K I
Sbjct: 231 CSYGRWSDASQLLSDMIEKKINPNL--VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288
Query: 98 DRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDII----AWTSLISAYTRAGRPINSLQL 153
D F NSL+ + + L +A+ +F+ + +D + +LI + ++ R + +L
Sbjct: 289 DIFTYNSLINGFC-MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 154 FSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGR 213
F +M + + T +++I D + ++S G + + S L+D
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407
Query: 214 NRAVRDALKLFDESPEPE---DVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGF 270
N + AL++FD + E D+ +T +I + + + LF ++ G+ P+
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK-GVKPNVV 466
Query: 271 TFGTLLAACANLGWLRQGKELHAKV 295
T+ T+++ + L++ L K+
Sbjct: 467 TYNTMISGLCSKRLLQEAYALLKKM 491
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/486 (20%), Positives = 203/486 (41%), Gaps = 55/486 (11%)
Query: 76 KTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLG--PHLPQAQTLFDSLAVRDIIA 133
++ +++ L ++ G + D + L+ + L P + + + D+ A
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFA 160
Query: 134 WTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVI 193
+ +LI+ + + R ++ ++ +M D P+ T + +I + L L + ++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 194 SRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPE---PEDVVGWTAIISTLTRNDMFR 250
S + + L++ V +ALKL DE D+ + II + + M
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 251 EALRLFVAMH-RGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESS 309
A + + +GC PD ++ LL A N G +G++L K+ NVV S
Sbjct: 281 RAFEMVRNLELKGCE--PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 310 LLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYEAVFE----LVRER 361
L+ + GK+ +A + + +K ++ S+ +++A+C+ + E ++ +
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 362 GVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
+ D+ + TVL K G D +E ++ K G V +
Sbjct: 399 CLPDIVNYNTVLATLC-----------------KNGKADQALE-----IFGKLGEVGCSP 436
Query: 422 RLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTG 481
N ++N M L +G L + +M+ G++PD IT+ ++ G
Sbjct: 437 ---------NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487
Query: 482 LVDEGRRYFALMVDEYGIK--PGVEHYNCMIDLLGRAEMIEEAESLLENA---DCRYDHS 536
+VDE F L+VD + P V YN ++ +A IE+A ++LE+ CR + +
Sbjct: 488 MVDEA---FELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNET 544
Query: 537 LWAVLL 542
+ VL+
Sbjct: 545 TYTVLI 550
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 391 QYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRN----QITWNAMIGGLAQNG 446
+ + K G DV +AL++ + K +D A R+ M ++ +T+N MIG L G
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 447 RGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHY 506
+ L++ ++ + +P IT+ ++ A G VDE + M+ G+KP + Y
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR-GLKPDMFTY 266
Query: 507 NCMIDLLGRAEMIEEAESLLENAD---CRYDHSLWAVLLGACTKCSDYVTAERVARKMI- 562
N +I + + M++ A ++ N + C D + +LL A + E++ KM
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 563 -ELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGV 600
+ +P+ +L+ + R G+ +AM + KLM+++G+
Sbjct: 327 EKCDPNVVTYSILITTLCRD-GKIEEAMNLLKLMKEKGL 364
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 195/457 (42%), Gaps = 22/457 (4%)
Query: 131 IIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHA 190
+I ++ L+ TRA R ++ + +M PN +++I + + L +
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 191 MVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVG---WTAIISTLTRND 247
+++S+G + + L+ Y +N +A +L E V +T++I L +
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 248 MFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVE 307
MF ALR FV + P G TL++ G + EL + + G +
Sbjct: 450 MFDSALR-FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 308 SSLLDMYGKCGKVGQA-RVVFDRLGD---KNSVSWTAMLSAYCQNKEYEAVF----ELVR 359
++LL + GK+ +A R+ + LG + VS+ ++S C K+ + F E+V+
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 360 ERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDF 419
D Y + ++ + V + R G DV S ++D K +
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 420 AQRLFLSMEVRN----QITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLF 475
Q F M +N + +N +I ++GR + LEL EDM +G+ P+ T+ ++
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 476 ACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDH 535
S V+E + F M E G++P V HY +ID G+ + + E LL + H
Sbjct: 689 GMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 536 S---LWAVLLGACTKCSDYVTAERVARKMIE--LEPD 567
+ V++G + + A R+ +M E + PD
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 105/489 (21%), Positives = 203/489 (41%), Gaps = 70/489 (14%)
Query: 58 LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLP 117
++P L + Y+ L++ T+ + K G + V N+L+ +++ G
Sbjct: 326 MEPTL--ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG---- 379
Query: 118 QAQTLFDSLAVRDII----------AWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAF 167
+L ++ ++D++ + +LI Y + G+ N+ +L +ML + N
Sbjct: 380 ---SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
Query: 168 TISSVITAASK---------------LRDLALGACLHAMVIS------------------ 194
+ +SVI LR+++ G L +IS
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 195 --RGFHSNTVISSALVDMYGRNRAVRDALKLFDE---SPEPEDVVGWTAIISTLTRNDMF 249
+GF +T S+AL+ + +A ++ E D V + +IS
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 250 REALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESS 309
EA M + GL PD +T+ L+ N+ + + + G+ +V S
Sbjct: 557 DEAFMFLDEMVKR-GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 310 LLDMYGKCGKVGQARVVFDRLGDKN----SVSWTAMLSAYCQNKEYEAVFEL---VRERG 362
++D K + + + FD + KN +V + ++ AYC++ EL ++ +G
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 363 VSDLYA-FGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
+S A + ++++ S ++ V K + + +G +V +AL+D Y K G + +
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 422 RLFLSMEVRN----QITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFAC 477
L M +N +IT+ MIGG A++G TE L +M ++G+ PD IT+ ++
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 795
Query: 478 SHTGLVDEG 486
G V E
Sbjct: 796 LKQGGVLEA 804
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 116/261 (44%), Gaps = 35/261 (13%)
Query: 239 IISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGL 298
++++L R + F++ F + +G + PD + F T + A G + + +L +K+
Sbjct: 232 LLTSLVRANEFQKCCEAFDVVCKG--VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA 289
Query: 299 GICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELV 358
G+ NVV ++++D G CG+ +A + +++ ++ S + L
Sbjct: 290 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG--------LT 341
Query: 359 RERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
R + + D Y VL+ + +KG +VIV + L+D + + G ++
Sbjct: 342 RAKRIGDAYF---VLK----------------EMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 419 FA---QRLFLSMEVR-NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVL 474
A + L +S + T+N +I G +NG+ L ++M+ G + +F V+
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Query: 475 -FACSHTGLVDEGRRYFALMV 494
CSH + D R+ M+
Sbjct: 443 CLLCSHL-MFDSALRFVGEML 462
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 195/457 (42%), Gaps = 22/457 (4%)
Query: 131 IIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHA 190
+I ++ L+ TRA R ++ + +M PN +++I + + L +
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 191 MVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVG---WTAIISTLTRND 247
+++S+G + + L+ Y +N +A +L E V +T++I L +
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 248 MFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVE 307
MF ALR FV + P G TL++ G + EL + + G +
Sbjct: 450 MFDSALR-FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 308 SSLLDMYGKCGKVGQA-RVVFDRLGD---KNSVSWTAMLSAYCQNKEYEAVF----ELVR 359
++LL + GK+ +A R+ + LG + VS+ ++S C K+ + F E+V+
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 360 ERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDF 419
D Y + ++ + V + R G DV S ++D K +
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 420 AQRLFLSMEVRN----QITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLF 475
Q F M +N + +N +I ++GR + LEL EDM +G+ P+ T+ ++
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 476 ACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDH 535
S V+E + F M E G++P V HY +ID G+ + + E LL + H
Sbjct: 689 GMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 536 S---LWAVLLGACTKCSDYVTAERVARKMIE--LEPD 567
+ V++G + + A R+ +M E + PD
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 105/489 (21%), Positives = 203/489 (41%), Gaps = 70/489 (14%)
Query: 58 LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLP 117
++P L + Y+ L++ T+ + K G + V N+L+ +++ G
Sbjct: 326 MEPTL--ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG---- 379
Query: 118 QAQTLFDSLAVRDII----------AWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAF 167
+L ++ ++D++ + +LI Y + G+ N+ +L +ML + N
Sbjct: 380 ---SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
Query: 168 TISSVITAASK---------------LRDLALGACLHAMVIS------------------ 194
+ +SVI LR+++ G L +IS
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 195 --RGFHSNTVISSALVDMYGRNRAVRDALKLFDE---SPEPEDVVGWTAIISTLTRNDMF 249
+GF +T S+AL+ + +A ++ E D V + +IS
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 250 REALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESS 309
EA M + GL PD +T+ L+ N+ + + + G+ +V S
Sbjct: 557 DEAFMFLDEMVKR-GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 310 LLDMYGKCGKVGQARVVFDRLGDKN----SVSWTAMLSAYCQNKEYEAVFEL---VRERG 362
++D K + + + FD + KN +V + ++ AYC++ EL ++ +G
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 363 VSDLYA-FGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
+S A + ++++ S ++ V K + + +G +V +AL+D Y K G + +
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 422 RLFLSMEVRN----QITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFAC 477
L M +N +IT+ MIGG A++G TE L +M ++G+ PD IT+ ++
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 795
Query: 478 SHTGLVDEG 486
G V E
Sbjct: 796 LKQGGVLEA 804
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 116/261 (44%), Gaps = 35/261 (13%)
Query: 239 IISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGL 298
++++L R + F++ F + +G + PD + F T + A G + + +L +K+
Sbjct: 232 LLTSLVRANEFQKCCEAFDVVCKG--VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA 289
Query: 299 GICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELV 358
G+ NVV ++++D G CG+ +A + +++ ++ S + L
Sbjct: 290 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG--------LT 341
Query: 359 RERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
R + + D Y VL+ + +KG +VIV + L+D + + G ++
Sbjct: 342 RAKRIGDAYF---VLK----------------EMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 419 FA---QRLFLSMEVR-NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVL 474
A + L +S + T+N +I G +NG+ L ++M+ G + +F V+
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Query: 475 -FACSHTGLVDEGRRYFALMV 494
CSH + D R+ M+
Sbjct: 443 CLLCSHL-MFDSALRFVGEML 462
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 110/515 (21%), Positives = 228/515 (44%), Gaps = 38/515 (7%)
Query: 119 AQTLFDSLAVR----DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVIT 174
A LFD + R D +++LI+++ + G ++L +M + + S++I
Sbjct: 174 AHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIE 233
Query: 175 AASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEP---E 231
+ +L D + + + + G + V ++++++YG+ + R+A L E E
Sbjct: 234 LSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLP 293
Query: 232 DVVGWTAIISTLTRNDMFREALRLFVAMHR-GCGLVPDGFTFGTLLAACANLGWLRQGKE 290
+ V ++ ++S N F EAL +F M C L D T ++ L +++
Sbjct: 294 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCAL--DLTTCNIMIDVYGQLDMVKEADR 351
Query: 291 LHAKVVGLGICGNVVVESSLLDMYGKCGKVGQA----RVVFDRLGDKNSVSWTAMLSAYC 346
L + + I NVV +++L +YG+ G+A R++ + ++N V++ M+ Y
Sbjct: 352 LFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 411
Query: 347 QNKEYEAVFELVRE---RGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR-DV 401
+ E+E LV+E RG+ + + T++ + G A + Q +R G D
Sbjct: 412 KTMEHEKATNLVQEMQSRGIEPNAITYSTII-SIWGKAGKLDRAATLFQKLRSSGVEIDQ 470
Query: 402 IVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKE 461
++ ++ Y + G + A+RL +++ + I I LA+ GR E +F +
Sbjct: 471 VLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFES 530
Query: 462 GMEPDYITFIGVLFACSHTGLVDEGRRYFALM-----VDEYGIKPGVEHYNCMIDLLGRA 516
G D I V F C L +RY ++ + G P +++ G+
Sbjct: 531 GEVKD----ISV-FGC-MINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQ 584
Query: 517 EMIEEAESL---LENADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIELEPDFHLS-- 571
E+A+++ ++ C + + +L + D+ E + +++ E +P+ +
Sbjct: 585 REFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRL-ESDPNVNSKEL 643
Query: 572 YVLLGNIYRAVGRWNDAMEIRKLMEDRGV-KKLPG 605
++++ +Y + NDA + M +RG+ K PG
Sbjct: 644 HLVVAALYERADKLNDASRVMNRMRERGILKPFPG 678
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 115/521 (22%), Positives = 216/521 (41%), Gaps = 33/521 (6%)
Query: 67 YASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLG---PHLPQAQTLF 123
Y +L+ + F L + + DR+ ++L+T + K G L Q +
Sbjct: 158 YNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKME 217
Query: 124 DSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLA 183
D++ +++LI R ++ +FS++ + P+ +S+I K +
Sbjct: 218 QDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFR 277
Query: 184 LGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPE---DVVGWTAII 240
L + G NTV S L+ +Y N +AL +F E E D+ +I
Sbjct: 278 EARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMI 337
Query: 241 STLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGI 300
+ DM +EA RLF ++ R + P+ ++ T+L + L + I
Sbjct: 338 DVYGQLDMVKEADRLFWSL-RKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDI 396
Query: 301 CGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYE---A 353
NVV ++++ +YGK + +A + + + N+++++ ++S + + + +
Sbjct: 397 EQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAAT 456
Query: 354 VFELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYA 412
+F+ +R GV D + T++ A V + K + + + D I + + A
Sbjct: 457 LFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRL----LHELKLPDNIPRETAITILA 512
Query: 413 KCGCVDFA----QRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYI 468
K G + A ++ F S EV++ + MI ++N R V+E+FE M G PD
Sbjct: 513 KAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSN 572
Query: 469 TFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLE- 527
VL A ++ + M +E + P H+ M+ L + E ESL +
Sbjct: 573 VIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLFQR 631
Query: 528 -----NADCRYDHSLWAVLLGACTKCSDYVTAERVARKMIE 563
N + + H + A L K +D A RV +M E
Sbjct: 632 LESDPNVNSKELHLVVAALYERADKLND---ASRVMNRMRE 669
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 130/314 (41%), Gaps = 23/314 (7%)
Query: 60 PNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQA 119
PN V Y++LL + FL ++ A + D N ++ +Y +L + +A
Sbjct: 293 PN--TVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLD-MVKEA 349
Query: 120 QTLFDSLAVRDI----IAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITA 175
LF SL DI +++ +++ Y A ++ LF M D+E N T +++I
Sbjct: 350 DRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKI 409
Query: 176 ASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDE---SPEPED 232
K + L + SRG N + S ++ ++G+ + A LF + S D
Sbjct: 410 YGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEID 469
Query: 233 VVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELH 292
V + +I R + A RL + +PD T + A G + +
Sbjct: 470 QVLYQTMIVAYERVGLMGHAKRLLHELK-----LPDNIPRETAITILAKAGRTEEATWVF 524
Query: 293 AKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRL------GDKNSVSWTAMLSAYC 346
+ G ++ V ++++Y + + VF+++ D N ++ +L+AY
Sbjct: 525 RQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIA--MVLNAYG 582
Query: 347 QNKEYEAVFELVRE 360
+ +E+E + RE
Sbjct: 583 KQREFEKADTVYRE 596
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 182/412 (44%), Gaps = 17/412 (4%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
D + + +L++ R +L+L +M+++ +P T+++++ ++ L
Sbjct: 157 DTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216
Query: 190 AMVISRGFHSNTVISSALVDMY---GRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRN 246
++ GF N V ++++ G+ + L+ +E D V ++ II L ++
Sbjct: 217 DRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
A LF M G D T+ TL+ N G G +L ++ I NVV
Sbjct: 277 GSLDNAFNLFNEMEIK-GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYEAVFELVR--- 359
S L+D + K GK+ +A + + + N++++ +++ +C+ E ++V
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 360 ERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
+G D+ F ++ + G E+ + +G + + + LV + + G ++
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 419 FAQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVL 474
A++LF M R + +++ ++ GL NG + LE+F + K ME D ++ ++
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Query: 475 FACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLL 526
+ VD+ F + + G+K YN MI L R + + +A+ L
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLK-GVKLDARAYNIMISELCRKDSLSKADILF 566
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 174/448 (38%), Gaps = 53/448 (11%)
Query: 39 CKDGSLRQALHLLN-TSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHS 97
C +G + A+ L++ +T PN V Y +L K+ L + I
Sbjct: 204 CLNGKVSDAVVLIDRMVETGFQPN--EVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 98 DRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVR----DIIAWTSLISAYTRAGRPINSLQL 153
D V S++ L L A LF+ + ++ DII + +LI + AGR + +L
Sbjct: 262 DA-VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKL 320
Query: 154 FSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGR 213
M+ + PN T S +I + K L L ++ RG NT+ ++L+D + +
Sbjct: 321 LRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK 380
Query: 214 NRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFG 273
+ +A+++ D + + +GC PD TF
Sbjct: 381 ENRLEEAIQMVD-------------------------------LMISKGCD--PDIMTFN 407
Query: 274 TLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK 333
L+ + G EL ++ G+ N V ++L+ + + GK+ A+ +F + +
Sbjct: 408 ILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Query: 334 ----NSVSWTAMLSAYCQNKEYEAVFELV----RERGVSDLYAFGTVLRACSGVAAVMLG 385
+ VS+ +L C N E E E+ + + D+ + ++ + V
Sbjct: 468 RVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDA 527
Query: 386 KEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSM----EVRNQITWNAMIGG 441
++ C KG D + ++ + + A LF M +++T+N +I
Sbjct: 528 WDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Query: 442 LAQNGRGTEVLELFEDMIKEGMEPDYIT 469
+ T EL E+M G D T
Sbjct: 588 HLGDDDATTAAELIEEMKSSGFPADVST 615
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 168/395 (42%), Gaps = 19/395 (4%)
Query: 149 NSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALV 208
+++ LF M+ P + + +A +K + L L + S+G + S ++
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 209 DMYGRNRAVRDAL----KLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCG 264
+ + R R + A K+ EP+ V+ + +++ L EAL L M G
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVI-FNTLLNGLCLECRVSEALELVDRMVE-MG 188
Query: 265 LVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQAR 324
P T TL+ G + L ++V G N V +L++ K G+ A
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 325 VVFDRLGDKN----SVSWTAMLSAYCQNKEYEAVFELVRERGV----SDLYAFGTVLRAC 376
+ ++ ++N +V ++ ++ C++ + F L E + +D+ + T++
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 377 SGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR----NQ 432
G ++ +++ +V+ S L+D + K G + A +L M R N
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 433 ITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFAL 492
IT+N++I G + R E +++ + MI +G +PD +TF ++ +D+G F
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 493 MVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLE 527
M G+ YN ++ ++ +E A+ L +
Sbjct: 429 M-SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 180/425 (42%), Gaps = 44/425 (10%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
D + +LI G+ ++ L +M++ +P+ T +S++ + D +L L
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEP---EDVVGWTAIISTLTRN 246
+ R ++ S ++D R+ + A+ LF E VV + +++ L +
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
+ + L M +VP+ TF LL G L++ EL+ +++ GI N++
Sbjct: 277 GKWNDGALLLKDMVSR-EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKEYEAVFELVRERGVSDL 366
++L+D Y ++ +A + D +VR + D+
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDL---------------------------MVRNKCSPDI 368
Query: 367 YAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLS 426
F ++++ V V G +V ++G + + S LV + + G + A+ LF
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428
Query: 427 M----EVRNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGL 482
M + + +T+ ++ GL NG+ + LE+FED+ K M+ + + ++ G
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488
Query: 483 VDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLE------NA--DCRYD 534
V++ F + + G+KP V Y MI L + + EA LL NA DC Y+
Sbjct: 489 VEDAWNLFCSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYN 547
Query: 535 HSLWA 539
+ A
Sbjct: 548 TLIRA 552
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 123/276 (44%), Gaps = 13/276 (4%)
Query: 264 GLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQA 323
G PD TF TL+ G + + L ++V G +VV +S+++ + G A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 324 RVVFDRLGDKN----SVSWTAMLSAYCQNKEYEAVFELVRE---RGV-SDLYAFGTVLRA 375
+ ++ ++N +++ ++ + C++ +A L +E +G+ S + + +++R
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 376 CSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR----N 431
G + V + +VI + L+D++ K G + A L+ M R N
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 432 QITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFA 491
IT+N ++ G R +E + + M++ PD +TF ++ VD+G + F
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392
Query: 492 LMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLE 527
+ + G+ Y+ ++ ++ I+ AE L +
Sbjct: 393 -NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 171/382 (44%), Gaps = 16/382 (4%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
D+ ++T LI + R R +L + +M+ L EP+ T S++ + + L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEP---EDVVGWTAIISTLTRN 246
+++ G+ N V+ + L+D +N + AL+L +E + DVV + +++ L +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
+ +A R+ M + + PD TF L+ G L + +EL+ +++ + N V
Sbjct: 225 GRWSDAARMLRDMMKR-SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYEAVFELVRERG 362
+S+++ G++ A+ FD + K N V++ ++S +C+ + + +L +
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 363 V----SDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
+D++ + T++ V + + ++ C V + D+I L+ G ++
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403
Query: 419 FAQRLFLSMEVRNQ----ITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVL 474
A F M + + +N MI GL + + + ELF + EG++PD T+ ++
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Query: 475 FACSHTGLVDEGRRYFALMVDE 496
G E M +E
Sbjct: 464 LGLCKNGPRREADELIRRMKEE 485
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 143/313 (45%), Gaps = 29/313 (9%)
Query: 219 DALKLFDE----SPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGT 274
DA LF E P P +V +T ++ T T N E + F G+ D ++F
Sbjct: 54 DAFALFFEMVHSQPLPS-IVDFTRLL-TATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 275 LLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQAR---VVFDRLG 331
L+ L + K++ LG ++V SLL + ++G A ++ + G
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 332 -DKNSVSWTAMLSAYCQNKEYEAVFELVRE---RGV-SDLYAFGTVLRAC--SGV---AA 381
+ N V + ++ C+N E EL+ E +G+ +D+ + T+L SG AA
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 382 VMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR----NQITWNA 437
ML +++ DV+ +AL+D++ K G +D AQ L+ M N +T+N+
Sbjct: 232 RMLR-----DMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 438 MIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEY 497
+I GL +GR + + F+ M +G P+ +T+ ++ +VDEG + F M E
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE- 345
Query: 498 GIKPGVEHYNCMI 510
G + YN +I
Sbjct: 346 GFNADIFTYNTLI 358
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 129/312 (41%), Gaps = 54/312 (17%)
Query: 59 DPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQ 118
+PN+ V+Y +L+ K L K G+ +D N+LLT G
Sbjct: 173 EPNV--VVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 119 AQTLFDSLAVR---DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITA 175
A+ L D + D++ +T+LI + + G + +L+ +M+ ++PN T +S+I
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN- 289
Query: 176 ASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEP---ED 232
G C+H GR + DA K FD +
Sbjct: 290 ---------GLCMH----------------------GR---LYDAKKTFDLMASKGCFPN 315
Query: 233 VVGWTAIISTLTRNDMFREALRLFVAMHRGC-GLVPDGFTFGTLLAACANLGWLRQGKEL 291
VV + +IS + M E ++LF M C G D FT+ TL+ +G LR ++
Sbjct: 316 VVTYNTLISGFCKFRMVDEGMKLFQRM--SCEGFNADIFTYNTLIHGYCQVGKLRVALDI 373
Query: 292 HAKVVGLGICGNVVVESSLLDMYGKC--GKVGQARVVFDRLGDKNS----VSWTAMLSAY 345
+V + +++ LL +G C G++ A V FD + + V++ M+
Sbjct: 374 FCWMVSRRVTPDIITHCILL--HGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431
Query: 346 CQNKEYEAVFEL 357
C+ + E +EL
Sbjct: 432 CKADKVEKAWEL 443
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 113/271 (41%), Gaps = 41/271 (15%)
Query: 249 FREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVES 308
F +A LF M L P F LL A ANL K+ GI ++ +
Sbjct: 52 FEDAFALFFEMVHSQPL-PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 309 SLLDMYGKCGKVGQARVVFDR---LGDKNS-VSWTAMLSAYCQNKEYEAVFELVRERGVS 364
L+ + +C ++ A V + LG + S V++ ++L +C F LV
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV------ 164
Query: 365 DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLF 424
+++ V+ G +V+V + L+D K G ++ A L
Sbjct: 165 -----------------ILM--------VKSGYEPNVVVYNTLIDGLCKNGELNIALELL 199
Query: 425 LSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHT 480
ME + + +T+N ++ GL +GR ++ + DM+K + PD +TF ++
Sbjct: 200 NEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQ 259
Query: 481 GLVDEGRRYFALMVDEYGIKPGVEHYNCMID 511
G +DE + + M+ + + P YN +I+
Sbjct: 260 GNLDEAQELYKEMI-QSSVDPNNVTYNSIIN 289
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 210/483 (43%), Gaps = 35/483 (7%)
Query: 111 KLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTIS 170
K+G L Q Q + DI+ + +LISAY+ G + +L + M P +T +
Sbjct: 253 KVGTFLSQVQ---EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYN 309
Query: 171 SVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEP 230
+VI K + A ++ G ++ +L+ + V + K+F +
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369
Query: 231 E---DVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQ 287
+ D+V +++++S TR+ +AL F ++ GL+PD + L+ G +
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA-GLIPDNVIYTILIQGYCRKGMISV 428
Query: 288 GKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLS 343
L +++ G +VV +++L K +G+A +F+ + ++ +S + T ++
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Query: 344 AYCQNKEYEAVFEL---VRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWR 399
+C+ + EL ++E+ + D+ + T+L V + KE+ V K
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP 548
Query: 400 DVIVESALVDLYAKCGCVDFAQRLFLSMEVRN----QITWNAMIGGLAQNGRGTEVLELF 455
I S LV+ G + A R++ M +N + N+MI G ++G ++
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608
Query: 456 EDMIKEGMEPDYITFIGVLFACSHTGLVDEGR--RYFALMV----DEYGIKPGVEHYNCM 509
E MI EG PD I++ +++ G V E + F L+ ++ G+ P V YN +
Sbjct: 609 EKMISEGFVPDCISYNTLIY-----GFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSI 663
Query: 510 IDLLGRAEMIEEAESLLENADCR---YDHSLWAVLLGACTKCSDYVTAERVARKMIE--L 564
+ R ++EAE +L R D S + ++ + A R+ +M++
Sbjct: 664 LHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723
Query: 565 EPD 567
PD
Sbjct: 724 SPD 726
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 108/499 (21%), Positives = 194/499 (38%), Gaps = 75/499 (15%)
Query: 35 ILQHCKDGSLRQALHLLNTSQTT-LDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKS 93
I + G + +A L+N P + Y +++ K + + A L+S
Sbjct: 277 ISAYSSKGLMEEAFELMNAMPGKGFSPGV--YTYNTVINGLCKHGKYERAKEVFAEMLRS 334
Query: 94 GIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRDIIA----WTSLISAYTRAGRPIN 149
G+ D SLL K G + + + +F + RD++ ++S++S +TR+G
Sbjct: 335 GLSPDSTTYRSLLMEACKKG-DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDK 393
Query: 150 SLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVD 209
+L F+ + + + P+ + +I G C M+ V
Sbjct: 394 ALMYFNSVKEAGLIPDNVIYTILIQ----------GYCRKGMIS--------------VA 429
Query: 210 MYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDG 269
M RN ++ + DVV + I+ L + M EA +LF M L PD
Sbjct: 430 MNLRNEMLQQGCAM--------DVVTYNTILHGLCKRKMLGEADKLFNEMTER-ALFPDS 480
Query: 270 FTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDR 329
+T L+ LG L+ EL K+ I +VV ++LLD +GK G + A+ ++
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 330 LGDK----NSVSWTAMLSAYCQNKEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLG 385
+ K +S++ +++A C F + E ++ VM+
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIK------------PTVMIC 588
Query: 386 KEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQITWNAMIGGLAQN 445
+ Y R G D ES F +++ V + I++N +I G +
Sbjct: 589 NSMIKGYCRSGNASD--GES-------------FLEKMISEGFVPDCISYNTLIYGFVRE 633
Query: 446 GRGTEVLELFEDMIKE--GMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGV 503
++ L + M +E G+ PD T+ +L + E M+ E G+ P
Sbjct: 634 ENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI-ERGVNPDR 692
Query: 504 EHYNCMIDLLGRAEMIEEA 522
Y CMI+ + + EA
Sbjct: 693 STYTCMINGFVSQDNLTEA 711
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 131/297 (44%), Gaps = 33/297 (11%)
Query: 251 EALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSL 310
E + F++ + G+ PD T+ TL++A ++ G + + EL + G G V +++
Sbjct: 252 EKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTV 311
Query: 311 LDMYGKCGKVGQARVVFDRL----GDKNSVSWTAMLSAYCQNK---EYEAVFELVRERG- 362
++ K GK +A+ VF + +S ++ ++L C+ E E VF +R R
Sbjct: 312 INGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDV 371
Query: 363 VSDLYAFGTVL----RACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
V DL F +++ R+ + A+M V G D ++ + L+ Y + G +
Sbjct: 372 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVK----EAGLIPDNVIYTILIQGYCRKGMIS 427
Query: 419 FAQRLFLSMEVRNQ----------ITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYI 468
A M +RN+ +T+N ++ GL + E +LF +M + + PD
Sbjct: 428 VA------MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSY 481
Query: 469 TFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESL 525
T ++ G + F M E I+ V YN ++D G+ I+ A+ +
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQKM-KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/415 (20%), Positives = 163/415 (39%), Gaps = 55/415 (13%)
Query: 239 IISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGL 298
+I T + REA F + R G L+ + +GW+ ++ ++
Sbjct: 171 LIRTYVQARKLREAHEAFTLL-RSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRS 229
Query: 299 GICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYEAV 354
G+ NV + +++ K GK+ + ++ +K + V++ ++SAY E
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 355 FELVRE---RGVSD-LYAFGTVLRACSGVAAVMLGKEVHCQYVRKG------GWRDVIVE 404
FEL+ +G S +Y + TV+ KEV + +R G +R +++E
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 405 -----------------------------SALVDLYAKCGCVDFAQRLFLSME----VRN 431
S+++ L+ + G +D A F S++ + +
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 432 QITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFA 491
+ + +I G + G + + L +M+++G D +T+ +L ++ E + F
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469
Query: 492 LMVDEYGIKPGVEHYNCMID---LLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKC 548
M E + P +ID LG + E ++ R D + LL K
Sbjct: 470 EMT-ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Query: 549 SDYVTAERVARKMI--ELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGVK 601
D TA+ + M+ E+ P +SY +L N + G +A + M + +K
Sbjct: 529 GDIDTAKEIWADMVSKEILPT-PISYSILVNALCSKGHLAEAFRVWDEMISKNIK 582
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 173/356 (48%), Gaps = 16/356 (4%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
DI+ SL++ + R +++ L QM+++ +P+ T +++I + L
Sbjct: 147 DIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALI 206
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFD--ESPEPE-DVVGWTAIISTLTRN 246
++ RG + V A+V+ + AL L + E+ + E +VV ++ +I +L +
Sbjct: 207 DRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKY 266
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
+AL LF M G+ P+ T+ +L++ N G L + ++ I N+V
Sbjct: 267 RHEDDALNLFTEMENK-GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVT 325
Query: 307 ESSLLDMYGKCGKVGQARVVFD----RLGDKNSVSWTAMLSAYC---QNKEYEAVFEL-V 358
S+L+D + K GK+ +A +++ R D N +++++++ +C + E + + EL +
Sbjct: 326 FSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMI 385
Query: 359 RERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
R+ + ++ + T++ V G E+ + ++G + + + L+ + + D
Sbjct: 386 RKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 445
Query: 419 FAQRLFLSMEV----RNQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITF 470
AQ +F M N +T+N ++ GL +NG+ + + +FE + + MEPD T+
Sbjct: 446 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 124/256 (48%), Gaps = 14/256 (5%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
+++ ++++I + + ++L LF++M + + PN T SS+I+ + + L
Sbjct: 252 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLL 311
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDE----SPEPEDVVGWTAIISTLTR 245
+ +I R + N V SAL+D + + + A KL++E S +P ++ ++++I+
Sbjct: 312 SDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP-NIFTYSSLINGFCM 370
Query: 246 NDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVV 305
D EA ++ M R +P+ T+ TL+ + +G EL ++ G+ GN V
Sbjct: 371 LDRLGEAKQMLELMIRK-DCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429
Query: 306 VESSLLDMYGKCGKVGQARVVFDRLGD----KNSVSWTAMLSAYCQNKEYE---AVFE-L 357
++L+ + + A++VF ++ N +++ +L C+N + VFE L
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489
Query: 358 VRERGVSDLYAFGTVL 373
R D+Y + ++
Sbjct: 490 QRSTMEPDIYTYNIMI 505
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 165/370 (44%), Gaps = 44/370 (11%)
Query: 219 DALKLF----DESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGT 274
DA+ LF P P ++ ++ ++S + + + F + M G+ + +T+
Sbjct: 61 DAIGLFGVMAQSRPFPS-IIEFSKLLSAIAKMNKFDLVISFGEKMEI-LGISHNLYTYNI 118
Query: 275 LLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGD-- 332
L+ L L K++ LG ++V +SLL+ + ++ A + D++ +
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 333 --KNSVSWTAMLSA-YCQNKEYEAVFELVR--ERGVS-DLYAFGTVL-----RACSGVAA 381
++V++T ++ + NK EAV + R +RG DL +G V+ R + +A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 382 VMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR----NQITWNA 437
+L K + +V++ S ++D K D A LF ME + N IT+++
Sbjct: 239 NLLNKMEAAKI-----EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 293
Query: 438 MIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEY 497
+I L GR ++ L DMI+ + P+ +TF ++ A G + + + + M+
Sbjct: 294 LISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR- 352
Query: 498 GIKPGVEHYN------CMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDY 551
I P + Y+ CM+D LG A+ + E L+ DC + + L+ +
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLE---LMIRKDCLPNVVTYNTLING------F 403
Query: 552 VTAERVARKM 561
A+RV + M
Sbjct: 404 CKAKRVDKGM 413
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 104/229 (45%), Gaps = 13/229 (5%)
Query: 39 CKDGSLRQALHLL-NTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHS 97
C G A LL + + ++PNL V +++L+ K + L+ +K I
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNL--VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356
Query: 98 DRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVRD----IIAWTSLISAYTRAGRPINSLQL 153
+ F +SL+ + L L +A+ + + + +D ++ + +LI+ + +A R ++L
Sbjct: 357 NIFTYSSLINGFCML-DRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMEL 415
Query: 154 FSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGR 213
F +M + N T +++I + RD + ++S G H N + + L+D +
Sbjct: 416 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 475
Query: 214 NRAVRDALKLFD----ESPEPEDVVGWTAIISTLTRNDMFREALRLFVA 258
N + A+ +F+ + EP D+ + +I + + ++ FVA
Sbjct: 476 NGKLAKAMVVFEYLQRSTMEP-DIYTYNIMIEGMCKAGKWKMGGIYFVA 523
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 179/393 (45%), Gaps = 17/393 (4%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
D+ ++T LI + R R +L L +M+ L P+ T+ S++ + L
Sbjct: 113 DLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLV 172
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLF---DESPEPEDVVGWTAIISTLTRN 246
+ GF N VI + +++ +NR + +AL++F ++ D V + +IS L+ +
Sbjct: 173 DSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNS 232
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
+ +A RL M + + P+ F L+ G L + + L+ +++ + NV
Sbjct: 233 GRWTDAARLLRDMVKR-KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFT 291
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYEAVFELVRERG 362
+SL++ + G +G A+ +FD + K + V++ +++ +C++K E +L E
Sbjct: 292 YNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 351
Query: 363 ----VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVD 418
V D + + T++ + + ++V + V G D++ + L+D G ++
Sbjct: 352 YQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIE 411
Query: 419 FAQRLFLSMEVRNQ----ITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVL 474
A + ++ IT+N +I GL + + E LF + ++G++PD I +I ++
Sbjct: 412 KALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMI 471
Query: 475 FACSHTGLVDEGRRYFALMVDEYGIKPGVEHYN 507
GL E + M E G P Y+
Sbjct: 472 SGLCRKGLQREADKLCRRM-KEDGFMPSERIYD 503
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 140/298 (46%), Gaps = 19/298 (6%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
D + + +LIS + +GR ++ +L M+ ++PN +++I K +L L+
Sbjct: 218 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 277
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEP---EDVVGWTAIISTLTRN 246
+I R N ++L++ + + + DA +FD DVV + +I+ ++
Sbjct: 278 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 337
Query: 247 DMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVV 306
+ ++LF M GLV D FT+ TL+ G L +++ ++V G+ ++V
Sbjct: 338 KRVEDGMKLFCEMTYQ-GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVT 396
Query: 307 ESSLLDMYGKCGKVGQARVVFDRLG----DKNSVSWTAMLSAYCQN---KEYEAVFELVR 359
+ LLD GK+ +A V+ + L D + +++ ++ C+ KE +F +
Sbjct: 397 YNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 456
Query: 360 ERGVS-DLYAFGTVLRACSGVAAVMLGKEVH--CQYVRKGGW--RDVIVESALVDLYA 412
+GV D A+ T++ SG+ L +E C+ +++ G+ + I + L D Y
Sbjct: 457 RKGVKPDAIAYITMI---SGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYT 511
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 115/271 (42%), Gaps = 41/271 (15%)
Query: 249 FREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVES 308
F +A LF M + +P F +L A + L+ K+ LGI ++ +
Sbjct: 60 FDDAFSLFCEMLQS-RPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 309 SLLDMYGKCGKVGQARVVFDR---LGDKNS-VSWTAMLSAYCQNKEYEAVFELVRERGVS 364
L+ + +C ++ A + + LG + S V+ ++L+ +CQ ++ LV
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLV-----D 173
Query: 365 DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLF 424
+ FG V +V++ + +++ K ++ A +F
Sbjct: 174 SMDGFGFV--------------------------PNVVIYNTVINGLCKNRDLNNALEVF 207
Query: 425 LSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHT 480
ME + + +T+N +I GL+ +GR T+ L DM+K ++P+ I F ++
Sbjct: 208 YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 267
Query: 481 GLVDEGRRYFALMVDEYGIKPGVEHYNCMID 511
G + E R + M+ + P V YN +I+
Sbjct: 268 GNLLEARNLYKEMIRR-SVVPNVFTYNSLIN 297
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 146/338 (43%), Gaps = 19/338 (5%)
Query: 188 LHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPE---PEDVVGWTAIISTLT 244
L M S G + I ++ +GR R ++ + + D + + + +I+ L
Sbjct: 99 LDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLV 158
Query: 245 RNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNV 304
+ D+ A F G+ D +T+G L+ + + G +L + G+ N
Sbjct: 159 KEDI-DIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNA 217
Query: 305 VVESSLLDMYGKCGKVGQARVVFDRLGDKNSVSWTAMLSAYCQNKE-------YEAVFEL 357
VV ++LL K GKVG+AR + + + N V++ ++SAYC ++ E F L
Sbjct: 218 VVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSL 277
Query: 358 VRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCV 417
V D+ V+ V EV + KGG DV+ + LV Y G +
Sbjct: 278 ---GFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKM 334
Query: 418 DFAQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGV 473
AQR F+ ME + N T+N +I G G L+ F DM + + ++ TF +
Sbjct: 335 RVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTL 394
Query: 474 LFACSHTGLVDEGRRYFALMVDEYGIKPG-VEHYNCMI 510
+ S G D+G + +M D + ++ YNC+I
Sbjct: 395 IRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVI 432
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 102/494 (20%), Positives = 200/494 (40%), Gaps = 32/494 (6%)
Query: 53 TSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSL---LTLY 109
S+ + P+LK ++ S+L K + + SGIH D + L L+L
Sbjct: 138 VSKFGIKPSLK--VFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLT 195
Query: 110 LKLGPHLPQAQTLFDSLAVRDIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTI 169
++G Q + S + + + +L+ A + G+ + L S+M EPN T
Sbjct: 196 NRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEM----KEPNDVTF 251
Query: 170 SSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPE 229
+ +I+A + L L S GF + V + ++++ V +AL++ +
Sbjct: 252 NILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVES 311
Query: 230 P---EDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLR 286
DVV ++ R A R F+ M R G +P+ T+ L+A ++G L
Sbjct: 312 KGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERK-GYLPNVETYNLLIAGYCDVGMLD 370
Query: 287 QGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDKNSV------SWTA 340
+ + I N ++L+ G+ + + + D ++V +
Sbjct: 371 SALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNC 430
Query: 341 MLSAYCQNKEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLG-----KEVHCQYVRK 395
++ + + +E E + + + L+ V R+ ++ G K + Q + +
Sbjct: 431 VIYGFYKENRWEDALEFLLK--MEKLFP-RAVDRSFKLISLCEKGGMDDLKTAYDQMIGE 487
Query: 396 GGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVRNQI----TWNAMIGGLAQNGRGTEV 451
GG +IV L+ Y++ G ++ + L M R + T+NA+I G + +
Sbjct: 488 GGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNG 547
Query: 452 LELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMID 511
++ EDM + G PD ++ +L G + + F+ MV E I P ++ ++
Sbjct: 548 IKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMV-EKSIVPDPSMWSSLMF 606
Query: 512 LLGRAEMIEEAESL 525
L + I SL
Sbjct: 607 CLSQKTAIHVNSSL 620
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 175/394 (44%), Gaps = 36/394 (9%)
Query: 142 TRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISR------ 195
R G +L ++ QM+ ++ P+ FT S V+ A + G AMV ++
Sbjct: 201 VRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRS-----GNVDKAMVFAKETESSL 255
Query: 196 GFHSNTVISSALVD---MYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMFREA 252
G N V ++L++ M G + L+L E +VV +T++I + + EA
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 253 LRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLD 312
+F + LV D +G L+ G +R +H ++ +G+ N + +SL++
Sbjct: 316 EHVFELLKEK-KLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLIN 374
Query: 313 MYGKCGKVGQARVVFDRLGD----KNSVSWTAMLSAYCQ----NKEYEAVFELVRERGVS 364
Y K G++ +A +F R+ D + ++ ++ YC+ ++ + ++ ++ V
Sbjct: 375 GYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVP 434
Query: 365 DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLF 424
+ + +L+ S + A + +++G D I S L++ K G + A +L+
Sbjct: 435 TVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLW 494
Query: 425 LSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHT 480
++ R + IT N MI GL + + E E+ +++ +P T+ A SH
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQ----ALSH- 549
Query: 481 GLVDEGRRYFALMVDEY----GIKPGVEHYNCMI 510
G G A V EY GI P +E YN +I
Sbjct: 550 GYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLI 583
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 124/571 (21%), Positives = 238/571 (41%), Gaps = 58/571 (10%)
Query: 33 SEILQHCKDGSLRQALH---LLNTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAH 89
S I +CK G + +A H LL + D ++ Y L+ +T +H +
Sbjct: 301 SLIKGYCKKGLMEEAEHVFELLKEKKLVADQHM----YGVLMDGYCRTGQIRDAVRVHDN 356
Query: 90 ALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLA----VRDIIAWTSLISAYTRAG 145
++ G+ ++ + NSL+ Y K G L +A+ +F + D + +L+ Y RAG
Sbjct: 357 MIEIGVRTNTTICNSLINGYCKSG-QLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAG 415
Query: 146 RPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISS 205
+L+L QM ++ P T + ++ S++ L M++ RG +++ + S
Sbjct: 416 YVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCS 475
Query: 206 ALVDMYGRNRAVRDALKLFDESPEP---EDVVGWTAIISTLTRNDMFREALRLF--VAMH 260
L++ + +A+KL++ D + +IS L + + EA + V +
Sbjct: 476 TLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIF 535
Query: 261 RGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLD---MYGKC 317
R C P T+ L +G L++ + + GI + + ++L+ Y
Sbjct: 536 R-CK--PAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHL 592
Query: 318 GKVGQARVVFDRLGDKNSV-SWTAMLSAYCQ----NKEYEAVFELVRERGVS-------- 364
KV + G +V ++ A+++ +C +K Y FE++ E+G++
Sbjct: 593 NKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMI-EKGITLNVNICSK 651
Query: 365 ---DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKG--GWRDVIVESALVDLYAKCGCVDF 419
L+ + AC ++L K V + G ++ + SA L +
Sbjct: 652 IANSLFRLDKIDEAC-----LLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESV 706
Query: 420 AQRLFLSMEVRNQITWNAMIGGLAQNGRGTEVLELFEDMI-KEGMEPDYITFIGVLFACS 478
+ V N I +N I GL + G+ + +LF D++ + PD T+ ++ C+
Sbjct: 707 ENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCA 766
Query: 479 HTGLVDEGRRYFALMVDEY---GIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCR--- 532
G +++ F L DE GI P + YN +I L + ++ A+ LL +
Sbjct: 767 IAGDINKA---FTLR-DEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGIT 822
Query: 533 YDHSLWAVLLGACTKCSDYVTAERVARKMIE 563
+ + L+ K + A R+ KMIE
Sbjct: 823 PNAITYNTLIDGLVKSGNVAEAMRLKEKMIE 853
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 113/516 (21%), Positives = 221/516 (42%), Gaps = 52/516 (10%)
Query: 101 VGNSLLTLYLKLGP------------------HLPQAQTLFDSLAVR----DIIAWTSLI 138
V + LL+L L GP + +A LF + R D+IA+++LI
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 139 SAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFH 198
Y +AG +LFSQ L ++ + SS I K DLA + ++ ++ +G
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 199 SNTVISSALVDMYGRNRAVRDALKLFDE----SPEPEDVVGWTAIISTLTRNDMFREALR 254
N V + L+ ++ + +A ++ + EP +V ++++I + R
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS-IVTYSSLIDGFCKCGNLRSGFA 447
Query: 255 LFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMY 314
L+ M + G PD +G L+ + G + K++G I NVVV +SL+D +
Sbjct: 448 LYEDMIK-MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 315 GKCGKVGQARVVFDRLG----DKNSVSWTAML------SAYCQNKEYE---AVFELVRER 361
+ + +A VF +G + ++T ++ A+C++ + +F+L++
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRN 566
Query: 362 GVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFA 420
+S D+ V+ + + + D++ + ++ Y +D A
Sbjct: 567 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 626
Query: 421 QRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFA 476
+R+F ++V N +T +I L +N + +F M ++G +P+ +T+ G L
Sbjct: 627 ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY-GCLMD 685
Query: 477 CSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENA-DCRY-- 533
+ EG + E GI P + Y+ +ID L + ++EA ++ A D +
Sbjct: 686 WFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP 745
Query: 534 DHSLWAVLLGACTKCSDYVTAERVARKMIE--LEPD 567
D +A+L+ K V A + M+ ++PD
Sbjct: 746 DVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 197/444 (44%), Gaps = 38/444 (8%)
Query: 188 LHAMVISRGFH-----SNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIIST 242
H +V+ RGF N V+ VD A R + D P P V T I
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLKGLSVDQI--EVASRLLSLVLDCGPAPNVVTFCTLINGF 296
Query: 243 LTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICG 302
R +M R A LF M + G+ PD + TL+ G L G +L ++ + G+
Sbjct: 297 CKRGEMDR-AFDLFKVMEQR-GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKL 354
Query: 303 NVVVESSLLDMYGKCGKVGQARVVFDRL----GDKNSVSWTAMLSAYCQN-KEYEA--VF 355
+VVV SS +D+Y K G + A VV+ R+ N V++T ++ CQ+ + YEA ++
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 356 ELVRERGVS-DLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKC 414
+ +RG+ + + +++ + G ++ ++ G DV++ LVD +K
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ 474
Query: 415 GCVDFAQRLFLSM---EVR-NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITF 470
G + A R + M +R N + +N++I G + R E L++F M G++PD TF
Sbjct: 475 GLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Query: 471 IGVLFA-------CSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAE 523
V+ C H G + F LM I + N +I LL + IE+A
Sbjct: 535 TTVMRVSIMEDAFCKHMKPT-IGLQLFDLM-QRNKISADIAVCNVVIHLLFKCHRIEDAS 592
Query: 524 SLLEN-ADCRYDHSLWAVLLGACTKCS--DYVTAERVARKMIELEPDFHLSYVLLGNIYR 580
N + + + + C CS AER+ +++++ P F + V L +
Sbjct: 593 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF-ELLKVTP-FGPNTVTLTILIH 650
Query: 581 AVGRWND---AMEIRKLMEDRGVK 601
+ + ND A+ + +M ++G K
Sbjct: 651 VLCKNNDMDGAIRMFSIMAEKGSK 674
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 138/327 (42%), Gaps = 22/327 (6%)
Query: 39 CKDGSLRQALHLL-NTSQTTLDPNLKPVLYASLLQTCTKTSSFLHGTTLHAHALKSGIHS 97
CK G+LR L + + P++ V+Y L+ +K LH L I
Sbjct: 437 CKCGNLRSGFALYEDMIKMGYPPDV--VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 98 DRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVR----DIIAWTSLI------SAYTRAGRP 147
+ V NSL+ + +L +A +F + + D+ +T+++ A+ + +P
Sbjct: 495 NVVVFNSLIDGWCRLN-RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKP 553
Query: 148 INSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSAL 207
LQLF M + + + VI K + + +I + V + +
Sbjct: 554 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 613
Query: 208 VDMYGRNRAVRDALKLFD---ESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCG 264
+ Y R + +A ++F+ +P + V T +I L +N+ A+R+F M G
Sbjct: 614 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK-G 672
Query: 265 LVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGKVGQAR 324
P+ T+G L+ + + +L ++ GI ++V S ++D K G+V +A
Sbjct: 673 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT 732
Query: 325 VVFDRLGD----KNSVSWTAMLSAYCQ 347
+F + D + V++ ++ YC+
Sbjct: 733 NIFHQAIDAKLLPDVVAYAILIRGYCK 759
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 179/405 (44%), Gaps = 43/405 (10%)
Query: 130 DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLH 189
D+ ++ +I+ R R + +L + +M+ EP+ T+SS+I + + L
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 190 AMVISRGFHSNTVISSALVDMYGRNRAVRDALKLFDESPEPEDVVGWTAIISTLTRNDMF 249
+ + GF + VI + ++D + V DA++LFD M
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDR---------------------ME 201
Query: 250 REALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESS 309
R+ +R D T+ +L+A G L +V I NV+ ++
Sbjct: 202 RDGVR------------ADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 310 LLDMYGKCGKVGQARVVFD----RLGDKNSVSWTAMLSAYCQN---KEYEAVFELVRERG 362
++D++ K GK +A +++ R D + ++ ++++ C + E + + +L+ +G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 363 -VSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQ 421
+ D+ + T++ V G ++ + ++G D I + ++ Y + G D AQ
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Query: 422 RLFLSMEVRNQI-TWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHT 480
+F M+ R I T++ ++ GL N R + L LFE+M K +E D T+ V+
Sbjct: 370 EIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKI 429
Query: 481 GLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAESL 525
G V++ F + + G+KP V Y MI R ++++ L
Sbjct: 430 GNVEDAWDLFRSLSCK-GLKPDVVSYTTMISGFCRKRQWDKSDLL 473
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 167/382 (43%), Gaps = 48/382 (12%)
Query: 232 DVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKEL 291
D+ + +I+ L R F AL + M + G PD T +L+ + +L
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKF-GYEPDVVTVSSLINGFCQGNRVFDAIDL 161
Query: 292 HAKVVGLGICGNVVVESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQ 347
+K+ +G +VV+ ++++D K G V A +FDR+ ++V++ ++++ C
Sbjct: 162 VSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCC 221
Query: 348 NKEYEAVFELVRERGVSDLYAFGTVLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESAL 407
+ + L+R+ + D+ +VI +A+
Sbjct: 222 SGRWSDAARLMRDMVMRDIVP-------------------------------NVITFTAV 250
Query: 408 VDLYAKCGCVDFAQRLFLSMEVR----NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGM 463
+D++ K G A +L+ M R + T+N++I GL +GR E ++ + M+ +G
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 464 EPDYITFIGVLFACSHTGLVDEGRRYFALMVDEYGIKPGVEHYNCMIDLLGRAEMIEEAE 523
PD +T+ ++ + VDEG + F M + G+ YN +I +A + A+
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMA-QRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Query: 524 SLLENADCRYDHSLWAVLL-GACTKC---SDYVTAERVARKMIELEPDFHLSYVLLGNIY 579
+ D R + +++LL G C V E + + IEL+ +Y ++ +
Sbjct: 370 EIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI---TTYNIVIHGM 426
Query: 580 RAVGRWNDAMEIRKLMEDRGVK 601
+G DA ++ + + +G+K
Sbjct: 427 CKIGNVEDAWDLFRSLSCKGLK 448
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 143/339 (42%), Gaps = 45/339 (13%)
Query: 65 VLYASLLQTCTKTSSFLHGTTLHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFD 124
V +SL+ + + L + + G D + N+++ K+G + A LFD
Sbjct: 140 VTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG-LVNDAVELFD 198
Query: 125 SL---AVR-DIIAWTSLISAYTRAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLR 180
+ VR D + + SL++ +GR ++ +L M+ D+ PN T ++VI K
Sbjct: 199 RMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEG 258
Query: 181 DLALGACLHAMVISRGFHSNTVISSALVD---MYGRNRAVRDALKLFDESPEPEDVVGWT 237
+ L+ + R + ++L++ M+GR + L L DVV +
Sbjct: 259 KFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYN 318
Query: 238 AIISTLTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAK--- 294
+I+ ++ E +LF M + GLV D T+ T++ G +E+ ++
Sbjct: 319 TLINGFCKSKRVDEGTKLFREMAQR-GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS 377
Query: 295 --------VVGLGICGNVVVESSL------------LDM-------YGKC--GKVGQARV 325
++ G+C N VE +L LD+ +G C G V A
Sbjct: 378 RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWD 437
Query: 326 VFDRLGDK----NSVSWTAMLSAYCQNKEYEAVFELVRE 360
+F L K + VS+T M+S +C+ ++++ L R+
Sbjct: 438 LFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 476
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 116/552 (21%), Positives = 238/552 (43%), Gaps = 48/552 (8%)
Query: 49 HLLNTSQ---------TTLDPNLKP--VLYASLLQTCTKTSSFLHGTTLHAHALKSGIHS 97
HL+ T Q L+ + +P +Y +Q K S G L I+
Sbjct: 153 HLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYP 212
Query: 98 DRFVGNSLLTLYLKLGPHLPQAQTLFDSLAVR----DIIAWTSLISAYTRAGRPINSLQL 153
F+ N L+ K G + A+ LFD + R +I + +LI Y +AG P S ++
Sbjct: 213 SVFIYNVLIDGLCK-GKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 154 FSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGR 213
+M +EP+ T ++++ K + + + GF + S L D Y
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331
Query: 214 NRAVRDALKLFD---ESPEPEDVVGWTAIISTLTRNDMFREALRLFVAMHRGCGLVPDGF 270
N AL +++ +S + + +++ L + +A + + GLVP+
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI-LGREMAKGLVPNEV 390
Query: 271 TFGTLLAACANLGWLRQGKELHAKVV-----GLGICGNVVVESSLLDMYGKCGKVGQARV 325
+ T++ G+ R+G + A++ G+ + + + L+ + + G++ A
Sbjct: 391 IYNTMID-----GYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEK 445
Query: 326 VFDRL---GDKNSV-SWTAMLSAYCQNKEYEAVFELVRER----GVSDLYAFGTVLRACS 377
+++ G SV ++ ++ Y + E++ F++++E + ++ ++GT++
Sbjct: 446 EVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLC 505
Query: 378 GVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR----NQI 433
+ ++ + V +G V + + L+D G ++ A R M + N +
Sbjct: 506 KGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLV 565
Query: 434 TWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALM 493
T+N +I GL+ G+ +E +L ++ ++G++PD T+ ++ S G +R AL
Sbjct: 566 TYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI---SGYGFAGNVQRCIALY 622
Query: 494 --VDEYGIKPGVEHYNCMIDLLGRAEMIEEAESLLENADCRYDHSLWAVLLGACTKCSDY 551
+ GIKP ++ Y+ +I L + E IE E L + D ++ +L D
Sbjct: 623 EEMKRSGIKPTLKTYHLLISLCTK-EGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDM 681
Query: 552 VTAERVARKMIE 563
A + ++MIE
Sbjct: 682 EKAFNLQKQMIE 693
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 127/588 (21%), Positives = 226/588 (38%), Gaps = 97/588 (16%)
Query: 105 LLTLYLKLGPHLPQAQTLFDSLAVRDII----AWTSLISAYTRAGRPINSLQLFSQMLDL 160
LL++ L + +A LF +L I + T L+ + + ++ +F +L+
Sbjct: 114 LLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILES 173
Query: 161 DMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTVISSALVDMYGRNRAVRDA 220
D P+ F I AA KL D+ G L + + + I + L+D + + + DA
Sbjct: 174 DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDA 233
Query: 221 LKLFDE------------------------SPEPE--------------DVVGWTAIIST 242
+LFDE +PE ++ + ++
Sbjct: 234 EQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKG 293
Query: 243 LTRNDMFREALRLFVAMHRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICG 302
L + M +A + M + G VPD FTF L ++ ++ V G+
Sbjct: 294 LFKAGMVEDAENVLKEM-KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKM 352
Query: 303 NVVVESSLLDMYGKCGKVGQARVVFDRLGDK----NSVSWTAMLSAYCQNKEYEAV---F 355
N S LL+ K GK+ +A + R K N V + M+ YC+ +
Sbjct: 353 NAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKI 412
Query: 356 ELVRERGVS-DLYAFGTVLRA-CSGVAAVMLGKEVHCQ------------------YVRK 395
E + ++G+ D A+ ++R C KEV+ Y RK
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRK 472
Query: 396 ----------------GGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR----NQITW 435
G +V+ L++ K + AQ + ME R +
Sbjct: 473 YEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIY 532
Query: 436 NAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITFIGVLFACSHTGLVDEGRRYFALMVD 495
N +I G G+ + ++M+K+G+E + +T+ ++ S TG + E L +
Sbjct: 533 NMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLL-LEIS 591
Query: 496 EYGIKPGVEHYNCMIDLLGRAEMIEEAESLLEN---ADCRYDHSLWAVLLGACTKCSDYV 552
G+KP V YN +I G A ++ +L E + + + +L+ CTK +
Sbjct: 592 RKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIEL 651
Query: 553 TAERVARKMIELEPDFHLSYVLLGNIYRAVGRWNDAMEIRKLMEDRGV 600
T ER+ +M L+PD L Y + + Y G A ++K M ++ +
Sbjct: 652 T-ERLFGEM-SLKPDL-LVYNGVLHCYAVHGDMEKAFNLQKQMIEKSI 696
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 172/403 (42%), Gaps = 23/403 (5%)
Query: 86 LHAHALKSGIHSDRFVGNSLLTLYLKLGPHLPQAQTLFDSLA---VRDIIAWTSLISAYT 142
++ A+ SG+ + + + LL K G + L +A V + + + ++I Y
Sbjct: 341 VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC 400
Query: 143 RAGRPINSLQLFSQMLDLDMEPNAFTISSVITAASKLRDLALGACLHAMVISRGFHSNTV 202
R G + + M M+P+ + +I +L ++ + +G +
Sbjct: 401 RKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460
Query: 203 ISSALVDMYGRNRAVR---DALKLFDESPEPEDVVGWTAIISTLTRNDMFREALRLFVAM 259
+ L+ YGR D LK +++ +VV + +I+ L + EA + M
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 520
Query: 260 HRGCGLVPDGFTFGTLLAACANLGWLRQGKELHAKVVGLGICGNVVVESSLLDMYGKCGK 319
G+ P + L+ C + G + +++ GI N+V ++L+D GK
Sbjct: 521 EDR-GVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGK 579
Query: 320 VGQAR---VVFDRLGDKNSV-SWTAMLSAYCQNKEYE---AVFELVRERGVSD-LYAFGT 371
+ +A + R G K V ++ +++S Y + A++E ++ G+ L +
Sbjct: 580 LSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHL 639
Query: 372 VLRACSGVAAVMLGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCVDFAQRLFLSMEVR- 430
++ C+ + L + + + K D++V + ++ YA G ++ A L M +
Sbjct: 640 LISLCTK-EGIELTERLFGEMSLKP---DLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKS 695
Query: 431 ---NQITWNAMIGGLAQNGRGTEVLELFEDMIKEGMEPDYITF 470
++ T+N++I G + G+ EV L ++M MEP+ T+
Sbjct: 696 IGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTY 738