Miyakogusa Predicted Gene

Lj6g3v1093610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1093610.1 tr|G7IIU2|G7IIU2_MEDTR p21-activated protein
kinase-interacting protein 1-like protein OS=Medicago
t,77.71,0,WD_REPEATS_2,WD40 repeat;
WD_REPEATS_REGION,WD40-repeat-containing domain; WD_REPEATS_1,WD40
repeat,,CUFF.59087.1
         (348 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G65030.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...   409   e-114
AT3G49660.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...    55   5e-08
AT4G29830.1 | Symbols: VIP3 | Transducin/WD40 repeat-like superf...    51   1e-06
AT4G15900.1 | Symbols: PRL1 | pleiotropic regulatory locus 1 | c...    51   1e-06

>AT1G65030.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr1:24156798-24158511 FORWARD LENGTH=345
          Length = 345

 Score =  409 bits (1052), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 205/344 (59%), Positives = 258/344 (75%), Gaps = 17/344 (4%)

Query: 18  INLVAGSYERFIWGFNLNPNRQ-------TLKPIFSYPSHLSVIKTLAVCGSVVASGGTD 70
           ++++AGSYERFIWGF L P +        TL P+FSYPSH+S I T+A  G   ASGG+D
Sbjct: 1   MSIIAGSYERFIWGFKLKPTKHDAESQTLTLSPLFSYPSHISPITTVACSGPAAASGGSD 60

Query: 71  DTIHLYNLSNASSLGSL--HDHSATVTALAFHSLPNIPHPTTLISADADGSVCIFDADSF 128
           DTIHLY+L +ASSLGSL  H+H+A++TAL+F++  ++  P  LISA ADGSV IFD D F
Sbjct: 61  DTIHLYDLPSASSLGSLLDHNHAASITALSFYTPSSLSFPRNLISAAADGSVAIFDTDPF 120

Query: 129 VHLKTLPIHRKAVNDLALHPSGTLALTVSRDRCFAMVNLVRGRRSFCCRLDNEATIVKFN 188
           V LK+   H+KAVNDLA+HPSG LAL V RD  FAM+NLVRG+RSFCCRL +EA++VKF+
Sbjct: 121 VLLKSFRPHKKAVNDLAIHPSGKLALAVYRDEFFAMLNLVRGKRSFCCRLGHEASLVKFD 180

Query: 189 AAGDAFFMAADETVSVHQAEDARLLFQLQCP--KRVLCAAPDKNGLLYTGGEDRNITAWD 246
            +G+ F+M     V VHQ+EDA+LL +L+ P  KR+LCA P ++G L+TGGEDR ITAWD
Sbjct: 181 PSGERFYMVVSNKVGVHQSEDAKLLLELENPSRKRILCATPGESGTLFTGGEDRAITAWD 240

Query: 247 IKSGKVAYSIEEAHTARVKGIVVL--GDCDGATEGDDPYLVASASSDGTIRVWDVRMAAT 304
             SGK+AYSIE+AH AR+KGIVVL   D DG+ E  DPYL+ SASSDG IRVWDVRMAA 
Sbjct: 241 TNSGKLAYSIEDAHPARIKGIVVLTRNDSDGSLE--DPYLIGSASSDGIIRVWDVRMAAK 298

Query: 305 EKPTPLAECKTESRLTCLSGSSMKLI--PKQGKGNPKVEDQMME 346
           E   PLAE  T+SRLTCL+GS++K +  P+ GK  P+  D+  E
Sbjct: 299 ENTKPLAETNTKSRLTCLAGSALKSMRRPQIGKQEPQKVDEEHE 342


>AT3G49660.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr3:18413690-18415223 FORWARD LENGTH=317
          Length = 317

 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 121/292 (41%), Gaps = 32/292 (10%)

Query: 20  LVAGSYERFIWGFNLNP-NRQTLKPIFSYPSHLSVIKTLAVCGS--VVASGGTDDTIHLY 76
           L + S ++ I  + +N  N    +P+  +  H + I  +A       + S   D T+ L+
Sbjct: 39  LASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLW 98

Query: 77  NLSNASSLGSLHDHSATVTALAFHSLPNIPHPTTLISADADGSVCIFDADSFVHLKTLPI 136
           ++   S + +L  H+     + F+     P    ++S   D +V I+D  +   LK LP 
Sbjct: 99  DVETGSLIKTLIGHTNYAFCVNFN-----PQSNMIVSGSFDETVRIWDVTTGKCLKVLPA 153

Query: 137 HRKAVNDLALHPSGTLALTVSRDRCFAMVNLVRGRRSFCCR--LDNE---ATIVKFNAAG 191
           H   V  +  +  G+L ++ S D    +  +       C +  +D+E    + V+F+  G
Sbjct: 154 HSDPVTAVDFNRDGSLIVSSSYD---GLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNG 210

Query: 192 DAFFMAA-DETVSVHQAEDARLLF----QLQCPKRVLCAAPDKNG-LLYTGGEDRNITAW 245
               +   D T+ +     A+ L      +     +  A    NG  + +G ED  +  W
Sbjct: 211 KFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMW 270

Query: 246 DIKSGKVAYSIEEAHTARVKGIVVLGDCDGATEGDDPYLVASASSDGTIRVW 297
           ++ S K+   + E HT  V  +         TE     L+AS S D T+R+W
Sbjct: 271 ELNSKKLLQKL-EGHTETVMNVAC-----HPTEN----LIASGSLDKTVRIW 312


>AT4G29830.1 | Symbols: VIP3 | Transducin/WD40 repeat-like
           superfamily protein | chr4:14597728-14599157 FORWARD
           LENGTH=321
          Length = 321

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 115/263 (43%), Gaps = 38/263 (14%)

Query: 62  SVVASGGTDDTIHLYNLSNASSLGSLHDHSATVTALAFHSLPNIPHPTTLISADA--DGS 119
           +++ +G  D+T+ L+       + +   HS  V ALA        HP+ +I+A +  D  
Sbjct: 31  ALLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALA-------AHPSGIIAASSSIDSF 83

Query: 120 VCIFDADSFVHLKTLPIHRKAVNDLALHPSGTL---------ALTVSRDRCFAMVNLVRG 170
           V +FD D+   +  L      V  +   P GT+         ++ +     + +++ +  
Sbjct: 84  VRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSI 143

Query: 171 RRSFCCRLDNEATIVKF------NAAGDAFFMAA-DETVSVHQAEDARLLFQLQ---CPK 220
            R    +  ++ +  KF      +  G      + D T+ V   + ++LL QL+    P 
Sbjct: 144 PRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPV 203

Query: 221 RVLCAAPDKNGLLYTGGEDRNITAWDIKSGKVAYSIEEAHTARVKGIVVLGDCDGATEGD 280
           R L  +P    +L++G +D ++   D + GK        HT+ V  +      D + +G 
Sbjct: 204 RSLVFSPVDPRVLFSGSDDGHVNMHDAE-GKTLLGSMSGHTSWVLSV------DASPDGG 256

Query: 281 DPYLVASASSDGTIRVWDVRMAA 303
               +A+ SSD T+R+WD++M A
Sbjct: 257 ---AIATGSSDRTVRLWDLKMRA 276


>AT4G15900.1 | Symbols: PRL1 | pleiotropic regulatory locus 1 |
           chr4:9023775-9027443 FORWARD LENGTH=486
          Length = 486

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 114/273 (41%), Gaps = 26/273 (9%)

Query: 50  HLSVIKTLAVCG--SVVASGGTDDTIHLYNLSNASSLGSLHDHSATVTALAFHSLPNIPH 107
           H+  ++ LAV    + + S G D  +  ++L     + S H H + V  LA H     P 
Sbjct: 217 HIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALH-----PT 271

Query: 108 PTTLISADADGSVCIFDADSFVHLKTLPIHRKAVNDLALHPSGTLALTVSRDRCFAMVNL 167
              L++   D    ++D  + + +  L  H   V  +   P+    +T S D      +L
Sbjct: 272 LDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDL 331

Query: 168 VRGR-RSFCCRLDNEATIVKFNAAGDAFFMA-ADET--VSVHQAEDARLLFQLQCPKRVL 223
             G+  S           +  +   +AF  A AD T   S+ + E    +   Q  K ++
Sbjct: 332 RYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKKFSLPKGEFCHNMLSQQ--KTII 389

Query: 224 CA-APDKNGLLYTGGEDRNITAWDIKSGKVAYSIEEAHTARVKGIV-----VLGDCDGAT 277
            A A +++G++ TGG++ +I  WD KSG   +S +++ T    G +     +   C   T
Sbjct: 390 NAMAVNEDGVMVTGGDNGSIWFWDWKSG---HSFQQSETIVQPGSLESEAGIYAACYDNT 446

Query: 278 EGDDPYLVASASSDGTIRVWDVRMAATEKPTPL 310
                  + +  +D TI++W     AT +  P+
Sbjct: 447 GSR----LVTCEADKTIKMWKEDENATPETHPI 475