Miyakogusa Predicted Gene
- Lj6g3v1093600.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1093600.1 Non Chatacterized Hit- tr|I1MHV4|I1MHV4_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,81.42,0,PPR,Pentatricopeptide repeat; no
description,Tetratricopeptide-like helical; seg,NULL; PPR:
pentatri,CUFF.59084.1
(719 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 392 e-109
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 381 e-106
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 373 e-103
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 366 e-101
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 366 e-101
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 360 2e-99
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 359 5e-99
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 355 7e-98
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 355 9e-98
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 354 1e-97
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 353 2e-97
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 352 4e-97
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 352 5e-97
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 350 2e-96
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 349 4e-96
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 5e-96
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 5e-95
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 7e-95
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 8e-95
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 1e-94
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 343 2e-94
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 5e-94
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 341 1e-93
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 3e-93
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 1e-92
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 2e-92
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 3e-91
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 7e-91
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 328 9e-90
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 326 3e-89
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 4e-89
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 324 1e-88
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 323 2e-88
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 322 9e-88
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 1e-87
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 7e-87
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 7e-87
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 3e-86
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 4e-86
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 6e-86
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 6e-86
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 7e-86
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 9e-86
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 1e-85
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 314 1e-85
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 3e-85
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 312 5e-85
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 311 9e-85
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 310 3e-84
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 9e-84
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 4e-83
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 304 2e-82
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 3e-82
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 3e-82
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 3e-82
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 303 3e-82
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 5e-82
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 1e-81
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 300 2e-81
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 3e-81
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 299 5e-81
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 5e-81
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 8e-81
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 1e-80
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 1e-80
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 1e-80
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 297 2e-80
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 297 2e-80
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 2e-80
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 296 3e-80
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 6e-80
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 295 6e-80
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 1e-79
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 4e-79
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 8e-79
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 9e-79
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 2e-78
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 290 3e-78
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 7e-78
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 2e-77
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 5e-77
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 3e-76
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 3e-76
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 4e-76
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 5e-76
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 282 6e-76
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 9e-76
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 3e-75
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 6e-75
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 9e-75
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 5e-74
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 6e-74
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 6e-74
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 3e-73
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 4e-73
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 8e-73
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 3e-72
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 269 4e-72
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 8e-72
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 268 1e-71
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 266 3e-71
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 264 2e-70
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 3e-70
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 5e-70
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 7e-70
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 9e-70
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 261 2e-69
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 260 2e-69
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 4e-69
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 5e-69
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 7e-69
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 7e-69
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 6e-68
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 255 7e-68
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 255 8e-68
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 1e-67
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 253 2e-67
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 3e-66
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 250 3e-66
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 3e-66
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 249 6e-66
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 8e-66
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 245 7e-65
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 1e-64
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 242 7e-64
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 7e-64
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 2e-63
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 7e-63
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 5e-62
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 6e-62
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 234 1e-61
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 4e-61
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 231 9e-61
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 231 2e-60
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 231 2e-60
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 2e-60
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 1e-59
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 5e-59
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 6e-59
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 225 7e-59
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 1e-58
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 3e-58
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 3e-57
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 6e-57
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 5e-56
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 7e-56
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 1e-55
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 4e-55
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 208 1e-53
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 207 2e-53
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 4e-53
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 8e-53
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 4e-52
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 4e-52
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 2e-51
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 6e-50
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 190 2e-48
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 7e-48
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 3e-46
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 179 6e-45
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 97 5e-20
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-16
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 4e-16
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 4e-16
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 7e-16
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 7e-16
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 8e-16
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 82 1e-15
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 82 1e-15
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 6e-15
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 7e-15
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 7e-15
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 79 9e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 79 1e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 3e-14
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 77 4e-14
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 9e-14
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 1e-13
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 75 2e-13
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 74 3e-13
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 7e-13
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 72 1e-12
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 2e-12
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 71 3e-12
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 3e-12
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 70 4e-12
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 70 7e-12
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 68 2e-11
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 3e-11
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 66 7e-11
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 7e-10
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 63 8e-10
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 8e-10
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 61 3e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 61 3e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 59 2e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 58 2e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 7e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 1e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 52 1e-06
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 2e-06
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 51 2e-06
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 5e-06
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 50 8e-06
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/668 (31%), Positives = 369/668 (55%), Gaps = 4/668 (0%)
Query: 33 LLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVI 92
LL+ C+ + L+QI F +GL+Q +KL+ + ++G + +VF ++ +V+
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102
Query: 93 YSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQIV 151
Y +L+ ++ + +K L + M + P + +++L+ C + + GK +H +V
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 152 KLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQ 210
K G L +Y K +N A + + M +L WN +++ ++G +
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222
Query: 211 LFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYV 270
+ M +EN++P+ IT++++L + L L+ +G+ +H + S + ++TAL+ MY
Sbjct: 223 MVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYA 282
Query: 271 KLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIP 330
K GSL+ AR +F+ M ++V WN M+ AY N PKE++ + M+ GV+P + +
Sbjct: 283 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 342
Query: 331 AISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKT 390
A+ + L E G+ +H + G D VSV N+LI MY C +++A +F + +T
Sbjct: 343 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 402
Query: 391 VVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHG 450
+VSW+AMI A + + ++AL+ F +M+ + D ++++ A++ H+ +++HG
Sbjct: 403 LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 462
Query: 451 YXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEW 510
T+L+ YAKCG I +AR +FD S + + WN+MI Y HG
Sbjct: 463 VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFD--MMSERHVTTWNAMIDGYGTHGFG 520
Query: 511 FQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHAC 570
EL+ +M+ +KP+ VTFL +++AC +SGLV+ G + F M + Y + S +H+
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580
Query: 571 MVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKN 630
MVDLLGRAG+++EA I +P+ VYG +L AC++H + AE AA++L + P +
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDD 640
Query: 631 AGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRS 690
G +VLL+NIY AA W+KV ++R + +GL+KTPGCS +E +VH F +HP S
Sbjct: 641 GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDS 700
Query: 691 VDIYSILK 698
IY+ L+
Sbjct: 701 KKIYAFLE 708
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/647 (32%), Positives = 364/647 (56%), Gaps = 5/647 (0%)
Query: 54 GLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLY 113
G+ N ++S L+ Y ++G + K+F D VI++ +L ++ G + + +
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 114 KEMVEKSMYPDEESCSFVLRSCFS-VSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKN 172
M + P+ + VL C S + + G +H +V G+D ++NSL+ +Y K
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287
Query: 173 G-FLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLL 231
G F +A + MS + WN MIS +SG MEE F M + P++IT +LL
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347
Query: 232 RSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLV 291
S L+ + +H I+ ++ ++ + +AL+ Y K + A+ +F + D+V
Sbjct: 348 PSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVV 407
Query: 292 VWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHV 351
V+ M+S Y NG +SLE+ +V+ + P+ T + + I L + G+++H +
Sbjct: 408 VFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFI 467
Query: 352 IRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEAL 411
I+ G D + ++ A+IDMY+ C +N A IF+ ++ + +VSW++MI A D A+
Sbjct: 468 IKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAI 527
Query: 412 SLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASY 471
+F +M + G D + + L A + + + + +HG+ E++L+ Y
Sbjct: 528 DIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMY 587
Query: 472 AKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQM-KLSNVKPDQV 530
AKCG ++ A +F K K+I++WNS+I+A HG+ L+++M + S ++PDQ+
Sbjct: 588 AKCGNLKAAMNVFKTMK--EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQI 645
Query: 531 TFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIET 590
TFL ++++C + G VD+G F+ M + YG QP QEH+AC+VDL GRAG++ EA + +++
Sbjct: 646 TFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKS 705
Query: 591 VPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKV 650
+P DA V+G LL AC++H + LAEVA+ KL++++P N+G YVL+SN +A A +W+ V
Sbjct: 706 MPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESV 765
Query: 651 AKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
K+RS +++R ++K PG SW+E N + H F D +HP S IYS+L
Sbjct: 766 TKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLL 812
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/587 (26%), Positives = 293/587 (49%), Gaps = 11/587 (1%)
Query: 31 SSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTEN 87
S LL C+ P L +Q+HA ++ + +S +++ Y G K+FY +
Sbjct: 39 SLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDL 98
Query: 88 PDSVI--YSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQG-K 144
S I +++I+ + + G + L Y +M+ + PD + ++++C ++ + +G
Sbjct: 99 RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGID 158
Query: 145 MVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFESG 203
+ + LGMD + V +SL++ Y + G ++ L + + + WN M++ + G
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 204 KMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNT 263
++ + FS MR + I PN++T +L L+ +G LH L++VS + E ++
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 278
Query: 264 ALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRP 323
+LLSMY K G DA +F M R D V WN M+S Y +G +ESL Y M+ SGV P
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP 338
Query: 324 DMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIF 383
D T + S+++ ++ E+ KQ+H +++R+ + + +ALID Y C G++ A+ IF
Sbjct: 339 DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIF 398
Query: 384 DLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALH 443
VV ++AMI + + +++L +F + + I +++ILP + AL
Sbjct: 399 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALK 458
Query: 444 YVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISA 503
R LHG+ +++ YAKCG + +A ++F+ + S +DI++WNSMI+
Sbjct: 459 LGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFE--RLSKRDIVSWNSMITR 516
Query: 504 YSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQP 563
++ +++ QM +S + D V+ L+AC N GK I M+ +
Sbjct: 517 CAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLAS 575
Query: 564 SQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMH 610
+ ++D+ + G + A + +T+ + + +++AC H
Sbjct: 576 DVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNH 621
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 195/399 (48%), Gaps = 3/399 (0%)
Query: 45 QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFG 104
Q+H + G+ S+ + L+ Y+K G + K+F D+V ++ ++ Q G
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSG 319
Query: 105 EHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDLVRN 163
E++L + EM+ + PD + S +L S + E K +H I++ + + +
Sbjct: 320 LMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTS 379
Query: 164 SLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQP 222
+L++ Y K G A + ++ + MIS +G + ++F + K I P
Sbjct: 380 ALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISP 439
Query: 223 NSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMF 282
N IT++++L L LK+G+ LH II + A++ MY K G + A +F
Sbjct: 440 NEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIF 499
Query: 283 EKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTE 342
E++ + D+V WN M++ A + P ++++ M SG+ D + A+S+ L
Sbjct: 500 ERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSES 559
Query: 343 WGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHA 402
+GK +H +I++ V + LIDMY+ C L +A +F + +K +VSW+++I A
Sbjct: 560 FGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACG 619
Query: 403 VHDQCLEALSLFIEM-KLCGTRVDFIIVINILPTFAKIG 440
H + ++L LF EM + G R D I + I+ + +G
Sbjct: 620 NHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVG 658
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 182/358 (50%), Gaps = 7/358 (1%)
Query: 29 TTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFT 85
T SSLL +K ++L+ QIH H + + L+S L+D Y K ++Q +F
Sbjct: 342 TFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQC 401
Query: 86 ENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSC-FSVSHEQGK 144
+ D V+++A++ G + +L +++ +V+ + P+E + +L ++ + G+
Sbjct: 402 NSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGR 461
Query: 145 MVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESG 203
+H I+K G D + +++++Y K G +N A+E E +S ++ WN+MI++ +S
Sbjct: 462 ELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSD 521
Query: 204 KMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNT 263
+F +M I + +++ L + +L G+A+H +I +L ++ +
Sbjct: 522 NPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSES 581
Query: 264 ALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMV-RSGVR 322
L+ MY K G+LK A +F+ M ++V WN +++A +G K+SL L + MV +SG+R
Sbjct: 582 TLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIR 641
Query: 323 PDMFTAIPAISSITQLKHTEWGKQMHAHVIRN-GSDYQVSVHNALIDMYSACNGLNSA 379
PD T + ISS + + G + + + G Q + ++D++ L A
Sbjct: 642 PDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA 699
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 157/333 (47%), Gaps = 17/333 (5%)
Query: 213 SRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKL 272
SR +E I P +++ LL++ + +LL+ G+ +H+ +IV+++ G+ + +L MY
Sbjct: 27 SRFLEETI-PRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMC 83
Query: 273 GSLKDARLMFEKMP--RNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIP 330
GS D MF ++ R+ + WN ++S++ NG ++L + M+ GV PD+ T
Sbjct: 84 GSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPC 143
Query: 331 AISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKT 390
+ + LK+ + + V G D V ++LI Y ++ ++FD + K
Sbjct: 144 LVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKD 203
Query: 391 VVSWSAMIKAHA---VHDQCLEALSLFIEMKLCGTRVDFIIVINILPT--FAKIGALHYV 445
V W+ M+ +A D ++ S+ ++ V F V+++ + +G
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGV---- 259
Query: 446 RYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYS 505
LHG + SLL+ Y+KCG + A KLF S D + WN MIS Y
Sbjct: 260 -QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFR--MMSRADTVTWNCMISGYV 316
Query: 506 KHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTA 538
+ G + + +M S V PD +TF LL +
Sbjct: 317 QSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/698 (31%), Positives = 377/698 (54%), Gaps = 12/698 (1%)
Query: 9 HLLNIRKIPYIVAPFQTRFFTTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKL 65
+L N K+ + + T S+L LC + L+ ++ +G +S+L SKL
Sbjct: 76 NLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKL 135
Query: 66 MDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDE 125
YT G + +VF + ++ ++ ++ L++ G+ ++ L+K+M+ + D
Sbjct: 136 SLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDS 195
Query: 126 ESCSFVLRSCFSV-SHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEG 183
+ S V +S S+ S G+ +H I+K G + V NSLV Y KN ++ A + +
Sbjct: 196 YTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDE 255
Query: 184 MSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIG 243
M+ ++ WN++I+ +G E+ +F +M I+ + T++++ D L+ +G
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 244 QALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGN 303
+A+HS+ + + E LL MY K G L A+ +F +M +V + M++ YA
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYARE 375
Query: 304 GCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVH 363
G E+++L M G+ PD++T ++ + + + GK++H + N + + V
Sbjct: 376 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 435
Query: 364 NALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLF---IEMKLC 420
NAL+DMY+ C + A +F + K ++SW+ +I ++ + EALSLF +E K
Sbjct: 436 NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRF 495
Query: 421 GTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMA 480
D V +LP A + A R +HGY SL+ YAKCG + +A
Sbjct: 496 SP--DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA 553
Query: 481 RKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACV 540
LFD+ S KD+++W MI+ Y HG + L+NQM+ + ++ D+++F+ LL AC
Sbjct: 554 HMLFDDIAS--KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS 611
Query: 541 NSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVY 600
+SGLVD+G F M +P+ EH+AC+VD+L R G + +A + IE +P+ DA ++
Sbjct: 612 HSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIW 671
Query: 601 GPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDR 660
G LL C++H D +LAE A+K+ +EP+N G YVL++NIYA A KW++V ++R + R
Sbjct: 672 GALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQR 731
Query: 661 GLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILK 698
GL+K PGCSW+E G+V+ F D S+P + +I + L+
Sbjct: 732 GLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLR 769
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/707 (31%), Positives = 383/707 (54%), Gaps = 41/707 (5%)
Query: 30 TSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLP---GLSQKVFYFTE 86
T S L C L+ H GL + S +KL+ + G +++VF +E
Sbjct: 35 TPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSE 94
Query: 87 NPDSV-IYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCF-SVSHEQGK 144
+ + +Y++++R + G + + L+ M+ + PD+ + F L +C S + G
Sbjct: 95 SYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGI 154
Query: 145 MVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESG 203
+H IVK+G V+NSLV Y + G L+ A + + MS + W +MI
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 204 KMEECFQLFSRM-RKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN 262
++ LF RM R E + PNS+T++ ++ + L L+ G+ +++ I S + +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV 274
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
+AL+ MY+K ++ A+ +F++ ++L + N M S Y G +E+L + M+ SGVR
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334
Query: 323 PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRI 382
PD + + AISS +QL++ WGK H +V+RNG + ++ NALIDMY C+ ++A RI
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394
Query: 383 FDLITDKTVVSWSAMIKAHAVHDQC-------------------------------LEAL 411
FD +++KTVV+W++++ + + + EA+
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454
Query: 412 SLFIEMKLC-GTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLAS 470
+F M+ G D + +++I +GAL ++++ Y T+L+
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDM 514
Query: 471 YAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQV 530
+++CG E A +F+ +++D+ AW + I A + G + EL++ M +KPD V
Sbjct: 515 FSRCGDPESAMSIFN--SLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGV 572
Query: 531 TFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIET 590
F+G LTAC + GLV +GKEIF M+ L+G P H+ CMVDLLGRAG ++EA ++IE
Sbjct: 573 AFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIED 632
Query: 591 VPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKV 650
+P+ + ++ LL+AC++ + +A AA+K+ + P+ G+YVLLSN+YA+AG+W+ +
Sbjct: 633 MPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDM 692
Query: 651 AKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
AK+R ++++GL+K PG S ++ G+ HEF D+SHP +I ++L
Sbjct: 693 AKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/708 (31%), Positives = 383/708 (54%), Gaps = 41/708 (5%)
Query: 29 TTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLP---GLSQKVFYFT 85
T S L C L+ H GL + S +KL+ + G +++VF +
Sbjct: 34 ATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS 93
Query: 86 ENPDSV-IYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCF-SVSHEQG 143
E+ + +Y++++R + G + + L+ M+ + PD+ + F L +C S + G
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 144 KMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFES 202
+H IVK+G V+NSLV Y + G L+ A + + MS + W +MI
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 203 GKMEECFQLFSRM-RKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTV 261
++ LF RM R E + PNS+T++ ++ + L L+ G+ +++ I S + +
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 262 NTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGV 321
+AL+ MY+K ++ A+ +F++ ++L + N M S Y G +E+L + M+ SGV
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 322 RPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARR 381
RPD + + AISS +QL++ WGK H +V+RNG + ++ NALIDMY C+ ++A R
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 382 IFDLITDKTVVSWSAMIKAHAVHDQC-------------------------------LEA 410
IFD +++KTVV+W++++ + + + EA
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 411 LSLFIEMKLC-GTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLA 469
+ +F M+ G D + +++I +GAL ++++ Y T+L+
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513
Query: 470 SYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQ 529
+++CG E A +F+ +++D+ AW + I A + G + EL++ M +KPD
Sbjct: 514 MFSRCGDPESAMSIFN--SLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 571
Query: 530 VTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIE 589
V F+G LTAC + GLV +GKEIF M+ L+G P H+ CMVDLLGRAG ++EA ++IE
Sbjct: 572 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 631
Query: 590 TVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDK 649
+P+ + ++ LL+AC++ + +A AA+K+ + P+ G+YVLLSN+YA+AG+W+
Sbjct: 632 DMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 691
Query: 650 VAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
+AK+R ++++GL+K PG S ++ G+ HEF D+SHP +I ++L
Sbjct: 692 MAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 360 bits (925), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 211/601 (35%), Positives = 326/601 (54%), Gaps = 53/601 (8%)
Query: 144 KMVHAQIVKLGMDAFDLVRNSLVEL-----------YEKNGFLNAHEPLEGMSVTELAYW 192
+++HAQ++K+G+ + + L+E Y + F EP L W
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP-------NLLIW 102
Query: 193 NNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIV 252
N M S +L+ M + PNS T +L+S K GQ +H ++
Sbjct: 103 NTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLK 162
Query: 253 SNLCGELTVNTALLSMYVKLGSLKDARLMFEK---------------------------- 284
+L V+T+L+SMYV+ G L+DA +F+K
Sbjct: 163 LGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKL 222
Query: 285 ---MPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHT 341
+P D+V WN M+S YA G KE+LEL M+++ VRPD T + +S+ Q
Sbjct: 223 FDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSI 282
Query: 342 EWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAH 401
E G+Q+H + +G + + NALID+YS C L +A +F+ + K V+SW+ +I +
Sbjct: 283 ELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGY 342
Query: 402 AVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGY--XXXXXXXX 459
+ EAL LF EM G + + +++ILP A +GA+ R++H Y
Sbjct: 343 THMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTN 402
Query: 460 XXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQ 519
TSL+ YAKCG IE A ++F+ HK + +WN+MI ++ HG F+L+++
Sbjct: 403 ASSLRTSLIDMYAKCGDIEAAHQVFNS--ILHKSLSSWNAMIFGFAMHGRADASFDLFSR 460
Query: 520 MKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAG 579
M+ ++PD +TF+GLL+AC +SG++D G+ IF+ M Y P EH+ CM+DLLG +G
Sbjct: 461 MRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG 520
Query: 580 QIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSN 639
EA ++I + + D ++ LL ACKMH + L E A+ LI +EP+N G+YVLLSN
Sbjct: 521 LFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSN 580
Query: 640 IYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILKV 699
IYA+AG+W++VAK R+ L D+G+KK PGCS +E + VHEF + D+ HPR+ +IY +L+
Sbjct: 581 IYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEE 640
Query: 700 M 700
M
Sbjct: 641 M 641
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 228/480 (47%), Gaps = 43/480 (8%)
Query: 8 FHLLNIRKIPYIVAPFQT-RFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLM 66
FH L P P+ + R + SLL C Q L+ IHA+ GLH + SKL+
Sbjct: 17 FHFLPSSSDP----PYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLI 72
Query: 67 D-CYTKFGLPGL--SQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYP 123
+ C GL + VF + P+ +I++ + R + + L LY M+ + P
Sbjct: 73 EFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLP 132
Query: 124 DEESCSFVLRSCF-SVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL------- 175
+ + FVL+SC S + ++G+ +H ++KLG D V SL+ +Y +NG L
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192
Query: 176 -------------------------NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQ 210
NA + + + V ++ WN MIS E+G +E +
Sbjct: 193 DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 252
Query: 211 LFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYV 270
LF M K N++P+ T++ ++ + +++G+ +H I L + AL+ +Y
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 271 KLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIP 330
K G L+ A +FE++P D++ WN ++ Y KE+L L M+RSG P+ T +
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 372
Query: 331 AISSITQLKHTEWGKQMHAHVIR--NGSDYQVSVHNALIDMYSACNGLNSARRIFDLITD 388
+ + L + G+ +H ++ + G S+ +LIDMY+ C + +A ++F+ I
Sbjct: 373 ILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILH 432
Query: 389 KTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYL 448
K++ SW+AMI A+H + + LF M+ G + D I + +L + G L R++
Sbjct: 433 KSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 165/340 (48%), Gaps = 10/340 (2%)
Query: 27 FFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTE 86
+ +SL+ + + L+ H + F H++ + L+ Y G +QK+F
Sbjct: 169 LYVHTSLISMYVQNGRLEDAH-KVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP 227
Query: 87 NPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCF-SVSHEQGKM 145
D V ++A++ ++ G +++ L L+K+M++ ++ PDE + V+ +C S S E G+
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 287
Query: 146 VHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGK 204
VH I G + + N+L++LY K G L A E + ++ WN +I
Sbjct: 288 VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNL 347
Query: 205 MEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLI--IVSNLCGELTVN 262
+E LF M + PN +T++++L + L + IG+ +H I + + ++
Sbjct: 348 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 407
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
T+L+ MY K G ++ A +F + L WN M+ +A +G S +L M + G++
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 467
Query: 323 PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGS-DYQVS 361
PD T + +S+ + + G+ H+ R + DY+++
Sbjct: 468 PDDITFVGLLSACSHSGMLDLGR----HIFRTMTQDYKMT 503
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 359 bits (921), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 210/676 (31%), Positives = 371/676 (54%), Gaps = 21/676 (3%)
Query: 44 QQIHARFFLHGLHQNS-SLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQ 102
+QIHA + G +S ++++ L++ Y K G G KVF + V +++++ +L
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 176
Query: 103 FGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMVHAQIVKLGMDAFDL-- 160
F + E L ++ M+++++ P + V+ +C ++ +G M+ Q+ G+ +L
Sbjct: 177 FEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS 236
Query: 161 -VRNSLVELYEKNGFLNAHEPLEG-MSVTELAYWNNMISQAFESGKMEECFQLFSRMRKE 218
+ N+LV +Y K G L + + L G +L WN ++S ++ ++ E + M E
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296
Query: 219 NIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELT-VNTALLSMYVKLGSLKD 277
++P+ T+ ++L + L +L+ G+ LH+ + + E + V +AL+ MY +
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLS 356
Query: 278 ARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRS-GVRPDMFTAIPAISSIT 336
R +F+ M + +WN M++ Y+ N KE+L L M S G+ + T + +
Sbjct: 357 GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 416
Query: 337 QLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSA 396
+ + +H V++ G D V N L+DMYS ++ A RIF + D+ +V+W+
Sbjct: 417 RSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNT 476
Query: 397 MIKAHAVHDQCLEALSLFIEMKLCGTRV-----------DFIIVINILPTFAKIGALHYV 445
MI + + +AL L +M+ +V + I ++ ILP+ A + AL
Sbjct: 477 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 536
Query: 446 RYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYS 505
+ +H Y ++L+ YAKCGC++M+RK+FD+ K++I WN +I AY
Sbjct: 537 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ--IPQKNVITWNVIIMAYG 594
Query: 506 KHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQ 565
HG + +L M + VKP++VTF+ + AC +SG+VD+G IF M YG +PS
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 654
Query: 566 EHHACMVDLLGRAGQIDEASKIIETVPLN-SDARVYGPLLSACKMHSDPRLAEVAAQKLI 624
+H+AC+VDLLGRAG+I EA +++ +P + + A + LL A ++H++ + E+AAQ LI
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLI 714
Query: 625 NMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVAD 684
+EP A +YVLL+NIY++AG WDK ++R ++++G++K PGCSW+E +VH+F D
Sbjct: 715 QLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGD 774
Query: 685 QSHPRSVDIYSILKVM 700
SHP+S + L+ +
Sbjct: 775 SSHPQSEKLSGYLETL 790
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 145/530 (27%), Positives = 265/530 (50%), Gaps = 28/530 (5%)
Query: 108 KTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDL-VRNSL 165
+ + Y +M+ + PD + +L++ + E GK +HA + K G + V N+L
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 166 VELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNS 224
V LY K G F ++ + +S WN++IS K E + F M EN++P+S
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 225 ITVINLLRSTVDLHL---LKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLM 281
T+++++ + +L + L +G+ +H+ + +NT L++MY KLG L ++++
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLASSKVL 258
Query: 282 FEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHT 341
DLV WN ++S+ N E+LE + MV GV PD FT + + + L+
Sbjct: 259 LGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEML 318
Query: 342 EWGKQMHAHVIRNGS-DYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKA 400
GK++HA+ ++NGS D V +AL+DMY C + S RR+FD + D+ + W+AMI
Sbjct: 319 RTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAG 378
Query: 401 HAVHDQCLEALSLFIEM-KLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXX 459
++ ++ EAL LFI M + G + + ++P + GA +HG+
Sbjct: 379 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDR 438
Query: 460 XXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAY--SKHGEWFQCFELY 517
+ +L+ Y++ G I++A ++F GK +D++ WN+MI+ Y S+H E L
Sbjct: 439 DRFVQNTLMDMYSRLGKIDIAMRIF--GKMEDRDLVTWNTMITGYVFSEHHE--DALLLL 494
Query: 518 NQM-----KLS------NVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQE 566
++M K+S ++KP+ +T + +L +C + KGKEI +
Sbjct: 495 HKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK-NNLATDVA 553
Query: 567 HHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLA 616
+ +VD+ + G + + K+ + +P + + ++ A MH + + A
Sbjct: 554 VGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGNGQEA 602
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 186/403 (46%), Gaps = 10/403 (2%)
Query: 191 YWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLI 250
+W +++ S + E + M I+P++ LL++ DL +++G+ +H+ +
Sbjct: 64 WWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 251 IVSNL-CGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKES 309
+TV L+++Y K G +F+++ + V WN ++S+ + +
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 310 LELVYCMVRSGVRPDMFTAIPAISSITQLKHTE---WGKQMHAHVIRNGSDYQVSVHNAL 366
LE CM+ V P FT + +++ + L E GKQ+HA+ +R G + + N L
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTL 242
Query: 367 IDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDF 426
+ MY L S++ + + +V+W+ ++ + ++Q LEAL EM L G D
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 427 IIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXX-XETSLLASYAKCGCIEMARKLFD 485
+ ++LP + + L + LH Y ++L+ Y C + R++FD
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 486 EGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLS-NVKPDQVTFLGLLTACVNSGL 544
G K I WN+MI+ YS++ + L+ M+ S + + T G++ ACV SG
Sbjct: 363 -GMFDRK-IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 545 VDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKI 587
+ KE V G + ++D+ R G+ID A +I
Sbjct: 421 FSR-KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRI 462
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 355 bits (911), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 202/596 (33%), Positives = 332/596 (55%), Gaps = 9/596 (1%)
Query: 108 KTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQG--KMVHAQIVKLGMDAFDLVRNSL 165
++L L++EM P+ + FV ++C ++ + G +MVHA ++K + V +
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLA-DVGCCEMVHAHLIKSPFWSDVFVGTAT 93
Query: 166 VELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNS 224
V+++ K N A + E M + WN M+S +SG ++ F LF MR I P+S
Sbjct: 94 VDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDS 153
Query: 225 ITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEK 284
+TV+ L++S LK+ +A+H++ I + ++TV +S Y K G L A+L+FE
Sbjct: 154 VTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEA 213
Query: 285 MPRND--LVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTE 342
+ R D +V WN M AY+ G ++ L M+R +PD+ T I +S +
Sbjct: 214 IDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLT 273
Query: 343 WGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHA 402
G+ +H+H I G+D + N I MYS SAR +FD++T +T VSW+ MI +A
Sbjct: 274 QGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYA 333
Query: 403 VHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXX-XXXXX 461
EAL+LF M G + D + +++++ K G+L +++
Sbjct: 334 EKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNV 393
Query: 462 XXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMK 521
+L+ Y+KCG I AR +FD + K ++ W +MI+ Y+ +G + + +L+++M
Sbjct: 394 MICNALIDMYSKCGSIHEARDIFD--NTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMI 451
Query: 522 LSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQI 581
+ KP+ +TFL +L AC +SG ++KG E F M +Y P +H++CMVDLLGR G++
Sbjct: 452 DLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKL 511
Query: 582 DEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIY 641
+EA ++I + DA ++G LL+ACK+H + ++AE AA+ L N+EP+ A YV ++NIY
Sbjct: 512 EEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIY 571
Query: 642 AAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
AAAG WD A++RS ++ R +KK PG S ++ NG+ H F V + H + IY L
Sbjct: 572 AAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTL 627
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 191/404 (47%), Gaps = 6/404 (1%)
Query: 192 WNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLII 251
WN I +A E LF M++ +PN+ T + ++ L + + +H+ +I
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 252 VSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLE 311
S ++ V TA + M+VK S+ A +FE+MP D WN M+S + +G ++
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 312 LVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYS 371
L M + + PD T + I S + K + + MHA IR G D QV+V N I Y
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYG 199
Query: 372 ACNGLNSARRIFDLIT--DKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIV 429
C L+SA+ +F+ I D+TVVSW++M KA++V + +A L+ M + D
Sbjct: 200 KCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF 259
Query: 430 INILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKS 489
IN+ + L R +H + + ++ Y+K AR LFD S
Sbjct: 260 INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTS 319
Query: 490 SHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGK 549
+ ++W MIS Y++ G+ + L++ M S KPD VT L L++ C G ++ GK
Sbjct: 320 --RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK 377
Query: 550 EIFKEMVDLYGYQPSQEHHA-CMVDLLGRAGQIDEASKIIETVP 592
I D+YG + ++D+ + G I EA I + P
Sbjct: 378 WI-DARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP 420
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 203/429 (47%), Gaps = 10/429 (2%)
Query: 23 FQTRFFTTSSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQ 79
F+ FT + C + + + +HA + + + +D + K +
Sbjct: 48 FEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAA 107
Query: 80 KVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSC-FSV 138
KVF D+ ++A+L Q G +K L++EM + PD + +++S F
Sbjct: 108 KVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEK 167
Query: 139 SHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNA----HEPLEGMSVTELAYWNN 194
S + + +HA ++LG+D V N+ + Y K G L++ E ++ T ++ WN+
Sbjct: 168 SLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVS-WNS 226
Query: 195 MISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSN 254
M G+ + F L+ M +E +P+ T INL S + L G+ +HS I
Sbjct: 227 MFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLG 286
Query: 255 LCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVY 314
++ +SMY K ARL+F+ M V W +M+S YA G E+L L +
Sbjct: 287 TDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFH 346
Query: 315 CMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHV-IRNGSDYQVSVHNALIDMYSAC 373
M++SG +PD+ T + IS + E GK + A I V + NALIDMYS C
Sbjct: 347 AMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKC 406
Query: 374 NGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINIL 433
++ AR IFD +KTVV+W+ MI +A++ LEAL LF +M + + I + +L
Sbjct: 407 GSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVL 466
Query: 434 PTFAKIGAL 442
A G+L
Sbjct: 467 QACAHSGSL 475
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 93/215 (43%), Gaps = 9/215 (4%)
Query: 380 RRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKI 439
RR++ + +V +W+ I+ + +E+L LF EMK G + + A++
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 440 GALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNS 499
+ +H + T+ + + KC ++ A K+F+ + +D WN+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFE--RMPERDATTWNA 123
Query: 500 MISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDL- 558
M+S + + G + F L+ +M+L+ + PD VT + L + S +K ++ + M +
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTL----IQSASFEKSLKLLEAMHAVG 179
Query: 559 --YGYQPSQEHHACMVDLLGRAGQIDEASKIIETV 591
G + G+ G +D A + E +
Sbjct: 180 IRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAI 214
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 355 bits (910), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 188/561 (33%), Positives = 319/561 (56%), Gaps = 7/561 (1%)
Query: 137 SVSHE-QGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNN 194
S +H+ Q K +HA+++ LG+ + L+ G + A + + + ++ WN
Sbjct: 30 SATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNA 89
Query: 195 MISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSN 254
+I + ++ ++S M+ + P+S T +LL++ L L++G+ +H+ +
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLG 149
Query: 255 LCGELTVNTALLSMYVKLGSLKDARLMFE--KMPRNDLVVWNIMVSAYAGNGCPKESLEL 312
++ V L+++Y K L AR +FE +P +V W +VSAYA NG P E+LE+
Sbjct: 150 FDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEI 209
Query: 313 VYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSA 372
M + V+PD + +++ T L+ + G+ +HA V++ G + + + +L MY+
Sbjct: 210 FSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAK 269
Query: 373 CNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINI 432
C + +A+ +FD + ++ W+AMI +A + EA+ +F EM R D I + +
Sbjct: 270 CGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSA 329
Query: 433 LPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHK 492
+ A++G+L R ++ Y ++L+ +AKCG +E AR +FD ++ +
Sbjct: 330 ISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFD--RTLDR 387
Query: 493 DIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIF 552
D++ W++MI Y HG + LY M+ V P+ VTFLGLL AC +SG+V +G F
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 553 KEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSD 612
M D + P Q+H+AC++DLLGRAG +D+A ++I+ +P+ V+G LLSACK H
Sbjct: 448 NRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRH 506
Query: 613 PRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLE 672
L E AAQ+L +++P N G+YV LSN+YAAA WD+VA++R ++++GL K GCSW+E
Sbjct: 507 VELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Query: 673 SNGQVHEFRVADQSHPRSVDI 693
G++ FRV D+SHPR +I
Sbjct: 567 VRGRLEAFRVGDKSHPRYEEI 587
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/407 (32%), Positives = 230/407 (56%), Gaps = 4/407 (0%)
Query: 31 SSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDS 90
+SL+D T L+QIHAR + GL + L +KL+ + FG +++VF P
Sbjct: 25 ASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQI 84
Query: 91 VIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQ 149
++AI+R S+ + L +Y M + PD + +L++C +SH Q G+ VHAQ
Sbjct: 85 FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQ 144
Query: 150 IVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTE--LAYWNNMISQAFESGKME 206
+ +LG DA V+N L+ LY K L +A EG+ + E + W ++S ++G+
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204
Query: 207 ECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALL 266
E ++FS+MRK +++P+ + ++++L + L LK G+++H+ ++ L E + +L
Sbjct: 205 EALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLN 264
Query: 267 SMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMF 326
+MY K G + A+++F+KM +L++WN M+S YA NG +E++++ + M+ VRPD
Sbjct: 265 TMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTI 324
Query: 327 TAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLI 386
+ AIS+ Q+ E + M+ +V R+ V + +ALIDM++ C + AR +FD
Sbjct: 325 SITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRT 384
Query: 387 TDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINIL 433
D+ VV WSAMI + +H + EA+SL+ M+ G + + + +L
Sbjct: 385 LDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 354 bits (908), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 211/674 (31%), Positives = 368/674 (54%), Gaps = 13/674 (1%)
Query: 32 SLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCY----TKFGLPGLSQKVFYFTEN 87
+L+ LC + + Q+ ++ + L SSL +L + + +FG + VF
Sbjct: 99 ALVRLC-EWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSE 157
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVE-KSMYPDEESCSFVLRSCFSVSH-EQGKM 145
+ ++ ++ ++ G ++ + LY M+ + PD + VLR+C + +GK
Sbjct: 158 RNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKE 217
Query: 146 VHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFESGK 204
VH +V+ G + V N+L+ +Y K G + + L + M ++ WN MIS FE+G
Sbjct: 218 VHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGM 277
Query: 205 MEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTA 264
E +LF MR ++ P+ +T+ +++ + L ++G+ +H+ +I + +++V +
Sbjct: 278 CHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNS 337
Query: 265 LLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPD 324
L MY+ GS ++A +F +M R D+V W M+S Y N P ++++ M + V+PD
Sbjct: 338 LTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPD 397
Query: 325 MFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFD 384
T +S+ L + G ++H I+ V V N LI+MYS C ++ A IF
Sbjct: 398 EITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH 457
Query: 385 LITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHY 444
I K V+SW+++I ++++C EAL +MK+ + + I + L A+IGAL
Sbjct: 458 NIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMC 516
Query: 445 VRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAY 504
+ +H + +LL Y +CG + A F+ S KD+ +WN +++ Y
Sbjct: 517 GKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN---SQKKDVTSWNILLTGY 573
Query: 505 SKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPS 564
S+ G+ EL+++M S V+PD++TF+ LL C S +V +G F +M D YG P+
Sbjct: 574 SERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPN 632
Query: 565 QEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLI 624
+H+AC+VDLLGRAG++ EA K I+ +P+ D V+G LL+AC++H L E++AQ +
Sbjct: 633 LKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIF 692
Query: 625 NMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVAD 684
++ K+ G Y+LL N+YA GKW +VAK+R +++ GL GCSW+E G+VH F D
Sbjct: 693 ELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDD 752
Query: 685 QSHPRSVDIYSILK 698
+ HP++ +I ++L+
Sbjct: 753 KYHPQTKEINTVLE 766
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 191/394 (48%), Gaps = 8/394 (2%)
Query: 202 SGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTV 261
+GK+EE +L + M++ + + + L+R + G ++S+ + S + +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 262 NTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVR-SG 320
A L+M+V+ G+L DA +F KM +L WN++V YA G E++ L + M+ G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 321 VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSAR 380
V+PD++T + + + GK++H HV+R G + + V NALI MY C + SAR
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 381 RIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIG 440
+FD + + ++SW+AMI + + C E L LF M+ D + + +++ +G
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 441 ALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSM 500
R +H Y SL Y G A KLF + KDI++W +M
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFS--RMERKDIVSWTTM 369
Query: 501 ISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVD--L 558
IS Y + + + Y M +VKPD++T +L+AC G +D G E+ K + L
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 559 YGYQPSQEHHACMVDLLGRAGQIDEASKIIETVP 592
Y + ++++ + ID+A I +P
Sbjct: 430 ISYVIVANN---LINMYSKCKCIDKALDIFHNIP 460
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 124/253 (49%), Gaps = 7/253 (2%)
Query: 302 GNGCPKESLELVYCM--VRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQ 359
NG +E+++L+ M +R V D+F A+ + + + E G ++++ + + S
Sbjct: 71 ANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQ--EEGSKVYSIALSSMSSLG 128
Query: 360 VSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEM-K 418
V + NA + M+ L A +F ++++ + SW+ ++ +A EA+ L+ M
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLW 188
Query: 419 LCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIE 478
+ G + D +L T I L + +H + +L+ Y KCG ++
Sbjct: 189 VGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVK 248
Query: 479 MARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTA 538
AR LFD + +DII+WN+MIS Y ++G + EL+ M+ +V PD +T +++A
Sbjct: 249 SARLLFD--RMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISA 306
Query: 539 CVNSGLVDKGKEI 551
C G G++I
Sbjct: 307 CELLGDRRLGRDI 319
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 353 bits (907), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 208/678 (30%), Positives = 365/678 (53%), Gaps = 11/678 (1%)
Query: 32 SLLDLCTKP----QHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFY-FTE 86
SLL CT + ++ +H R GL ++ L L++ Y ++ VF F
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 87 NPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSM-YPDEESCSFVLRSCFSVSHE-QGK 144
D I+++++ S+ TL ++K ++ S+ PD + V+++ ++ E G+
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 145 MVHAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAFESG 203
M+H +VK G +V +SLV +Y K N F N+ + + M ++A WN +IS ++SG
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG 187
Query: 204 KMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNT 263
+ E+ +LF RM +PNS+++ + + L L+ G+ +H + + VN+
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNS 247
Query: 264 ALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRP 323
AL+ MY K L+ AR +F+KMPR LV WN M+ Y G K +E++ M+ G RP
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRP 307
Query: 324 DMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIF 383
T + + ++ ++ GK +H +VIR+ + + V+ +LID+Y C N A +F
Sbjct: 308 SQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVF 367
Query: 384 DLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALH 443
SW+ MI ++ +A+ ++ +M G + D + ++LP +++ AL
Sbjct: 368 SKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALE 427
Query: 444 YVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISA 503
+ +H ++LL Y+KCG + A ++F+ KD+++W MISA
Sbjct: 428 KGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFN--SIPKKDVVSWTVMISA 485
Query: 504 YSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQP 563
Y HG+ + +++M+ +KPD VT L +L+AC ++GL+D+G + F +M YG +P
Sbjct: 486 YGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEP 545
Query: 564 SQEHHACMVDLLGRAGQIDEASKIIETVPLNSD-ARVYGPLLSACKMHSDPRLAEVAAQK 622
EH++CM+D+LGRAG++ EA +II+ P SD A + L SAC +H + L + A+
Sbjct: 546 IIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARL 605
Query: 623 LINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRV 682
L+ P +A Y++L N+YA+ WD ++R +++ GL+K PGCSW+E + +V F
Sbjct: 606 LVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFA 665
Query: 683 ADQSHPRSVDIYSILKVM 700
D+SH R+ ++Y L ++
Sbjct: 666 EDRSHLRAENVYECLALL 683
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 352 bits (904), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 221/722 (30%), Positives = 360/722 (49%), Gaps = 59/722 (8%)
Query: 30 TSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENP- 88
T + C ++ IH + G+ +L+S L+ Y G LS V P
Sbjct: 31 TPPFIHKCKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGC--LSHAVSLLRRFPP 87
Query: 89 -DSVIY--SAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GK 144
D+ +Y ++++R+ G K L+L+ M S PD + FV ++C +S + G+
Sbjct: 88 SDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGE 147
Query: 145 MVHAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAFESG 203
HA + G + V N+LV +Y + +A + + MSV ++ WN++I + G
Sbjct: 148 SAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLG 207
Query: 204 KMEECFQLFSRMRKE-NIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN 262
K + ++FSRM E +P++IT++N+L L +G+ LH + S + + V
Sbjct: 208 KPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG 267
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMV------------------------- 297
L+ MY K G + +A +F M D+V WN MV
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIK 327
Query: 298 ----------SAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQM 347
S YA G E+L + M+ SG++P+ T I +S + GK++
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387
Query: 348 HAHVIR-------NGSDYQVSVHNALIDMYSACNGLNSARRIFDLIT--DKTVVSWSAMI 398
H + I+ NG + V N LIDMY+ C +++AR +FD ++ ++ VV+W+ MI
Sbjct: 388 HCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 447
Query: 399 KAHAVHDQCLEALSLFIEM--KLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXX 456
++ H +AL L EM + C TR + + L A + AL + +H Y
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ 507
Query: 457 XXXX-XXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFE 515
L+ YAKCG I AR +FD + K+ + W S+++ Y HG +
Sbjct: 508 QNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMA--KNEVTWTSLMTGYGMHGYGEEALG 565
Query: 516 LYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLL 575
++++M+ K D VT L +L AC +SG++D+G E F M ++G P EH+AC+VDLL
Sbjct: 566 IFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLL 625
Query: 576 GRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYV 635
GRAG+++ A ++IE +P+ V+ LS C++H L E AA+K+ + + G+Y
Sbjct: 626 GRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYT 685
Query: 636 LLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYS 695
LLSN+YA AG+W V ++RS +R +G+KK PGCSW+E F V D++HP + +IY
Sbjct: 686 LLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQ 745
Query: 696 IL 697
+L
Sbjct: 746 VL 747
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 352 bits (903), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 207/647 (31%), Positives = 344/647 (53%), Gaps = 8/647 (1%)
Query: 46 IHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGE 105
+HA GL N + S L+ Y+K + KVF E + V ++A++R + GE
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 106 HEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH--EQGKMVHAQIVKLGMDAFDLVRN 163
K + L+ +M D+ + + +L +C + SH E G H+ I+K + V N
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTC-AASHDLEMGSQFHSIIIKKKLAKNLFVGN 467
Query: 164 SLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQP 222
+LV++Y K G L +A + E M + WN +I + E F LF RM I
Sbjct: 468 ALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVS 527
Query: 223 NSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMF 282
+ + + L++ +H L G+ +H L + L +L ++L+ MY K G +KDAR +F
Sbjct: 528 DGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVF 587
Query: 283 EKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTE 342
+P +V N +++ Y+ N +E++ L M+ GV P T + + + +
Sbjct: 588 SSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLT 646
Query: 343 WGKQMHAHVIRNG-SDYQVSVHNALIDMYSACNGLNSARRIF-DLITDKTVVSWSAMIKA 400
G Q H + + G S + +L+ MY G+ A +F +L + K++V W+ M+
Sbjct: 647 LGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSG 706
Query: 401 HAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXX 460
H+ + EAL + EM+ G D + +L + + +L R +H
Sbjct: 707 HSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLD 766
Query: 461 XXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQM 520
+L+ YAKCG ++ + ++FDE + ++++WNS+I+ Y+K+G ++++ M
Sbjct: 767 ELTSNTLIDMYAKCGDMKGSSQVFDEMRR-RSNVVSWNSLINGYAKNGYAEDALKIFDSM 825
Query: 521 KLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQ 580
+ S++ PD++TFLG+LTAC ++G V G++IF+ M+ YG + +H ACMVDLLGR G
Sbjct: 826 RQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGY 885
Query: 581 IDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNI 640
+ EA IE L DAR++ LL AC++H D E++A+KLI +EP+N+ YVLLSNI
Sbjct: 886 LQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNI 945
Query: 641 YAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSH 687
YA+ G W+K +R +RDRG+KK PG SW++ + H F D+SH
Sbjct: 946 YASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSH 992
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 142/578 (24%), Positives = 269/578 (46%), Gaps = 50/578 (8%)
Query: 24 QTRFFTTSSLLDLCTKPQHL-------QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPG 76
Q + F + + D PQ L + +H++ + G+ L + ++D Y K
Sbjct: 55 QCKLFKSRKVFD--EMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVS 112
Query: 77 LSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCF 136
++K F F E D ++++L S G+ K L + + E ++P++ + S VL +C
Sbjct: 113 YAEKQFDFLEK-DVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCA 171
Query: 137 SVSH-EQGKMVHAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNN 194
++ E G+ +H ++K+G++ +LV++Y K + +A E + W
Sbjct: 172 RETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTC 231
Query: 195 MISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSN 254
+ S ++G EE +F RMR E +P+ + + +
Sbjct: 232 LFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV------------------------ 267
Query: 255 LCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVY 314
+NT Y++LG LKDARL+F +M D+V WN+M+S + GC ++E +
Sbjct: 268 ------INT-----YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFF 316
Query: 315 CMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACN 374
M +S V+ T +S+I + + + G +HA I+ G + V ++L+ MYS C
Sbjct: 317 NMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCE 376
Query: 375 GLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILP 434
+ +A ++F+ + +K V W+AMI+ +A + + + + LF++MK G +D ++L
Sbjct: 377 KMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLS 436
Query: 435 TFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDI 494
T A L H +L+ YAKCG +E AR++F+ + +D
Sbjct: 437 TCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFE--RMCDRDN 494
Query: 495 IAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKE 554
+ WN++I +Y + + F+L+ +M L + D L AC + + +GK++
Sbjct: 495 VTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCL 554
Query: 555 MVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVP 592
V G + ++D+ + G I +A K+ ++P
Sbjct: 555 SVKC-GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/516 (26%), Positives = 234/516 (45%), Gaps = 41/516 (7%)
Query: 28 FTTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
FT S +L C + +++ QIH GL +NS L+D Y K +++VF +
Sbjct: 161 FTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEW 220
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGK 144
+P++V ++ + + G E+ + +++ M ++ PD
Sbjct: 221 IVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHL------------------ 262
Query: 145 MVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEG-MSVTELAYWNNMISQAFESG 203
AF V N+ + L G L L G MS ++ WN MIS + G
Sbjct: 263 ------------AFVTVINTYIRL----GKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Query: 204 KMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNT 263
+ F MRK +++ T+ ++L + + L +G +H+ I L + V +
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366
Query: 264 ALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRP 323
+L+SMY K ++ A +FE + + V WN M+ YA NG + +EL M SG
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI 426
Query: 324 DMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIF 383
D FT +S+ E G Q H+ +I+ + V NAL+DMY+ C L AR+IF
Sbjct: 427 DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIF 486
Query: 384 DLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALH 443
+ + D+ V+W+ +I ++ + EA LF M LCG D + + L + L+
Sbjct: 487 ERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLY 546
Query: 444 YVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISA 503
+ +H +SL+ Y+KCG I+ ARK+F +++ N++I+
Sbjct: 547 QGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS--SLPEWSVVSMNALIAG 604
Query: 504 YSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTAC 539
YS++ + L+ +M V P ++TF ++ AC
Sbjct: 605 YSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 164/357 (45%), Gaps = 39/357 (10%)
Query: 240 LKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSA 299
L+IG+A+HS ++ + E + A++ +Y K + A F+ + + D+ WN M+S
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLSM 134
Query: 300 YAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQ 359
Y+ G P + L + + + P+ FT +S+ + + E+G+Q+H +I+ G +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 360 VSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKL 419
AL+DMY+ C+ ++ ARR+F+ I D V W+ + + EA+ +F M+
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 420 CGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEM 479
G R D + + ++ T+ ++G L R L G EM
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFG---------------------------EM 287
Query: 480 ARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTAC 539
S D++AWN MIS + K G E + M+ S+VK + T +L+A
Sbjct: 288 ----------SSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 540 VNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSD 596
+D G + E + L G + + +V + + +++ A+K+ E + +D
Sbjct: 338 GIVANLDLGLVVHAEAIKL-GLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND 393
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 350 bits (898), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 212/673 (31%), Positives = 358/673 (53%), Gaps = 12/673 (1%)
Query: 32 SLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSV 91
+L CT Q + +HAR + QN +S+KL++ Y G L++ F +N D
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVY 118
Query: 92 IYSAILRNLSQFGEHEKTLFLYKE-MVEKSMYPDEESCSFVLRSCFSVSHEQGKMVHAQI 150
++ ++ + G + + + M+ + PD + VL++C +V G +H
Sbjct: 119 AWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI--DGNKIHCLA 176
Query: 151 VKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECF 209
+K G V SL+ LY + NA + M V ++ WN MIS +SG +E
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Query: 210 QLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMY 269
L + +R +S+TV++LL + + G +HS I L EL V+ L+ +Y
Sbjct: 237 TLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292
Query: 270 VKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAI 329
+ G L+D + +F++M DL+ WN ++ AY N P ++ L M S ++PD T I
Sbjct: 293 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLI 352
Query: 330 PAISSITQLKHTEWGKQMHAHVIRNGSDYQ-VSVHNALIDMYSACNGLNSARRIFDLITD 388
S ++QL + + +R G + +++ NA++ MY+ ++SAR +F+ + +
Sbjct: 353 SLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN 412
Query: 389 KTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCG-TRVDFIIVINILPTFAKIGALHYVRY 447
V+SW+ +I +A + EA+ ++ M+ G + +++LP ++ GAL
Sbjct: 413 TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK 472
Query: 448 LHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKH 507
LHG TSL Y KCG +E A LF + + + WN++I+ + H
Sbjct: 473 LHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQ--IPRVNSVPWNTLIACHGFH 530
Query: 508 GEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEH 567
G + L+ +M VKPD +TF+ LL+AC +SGLVD+G+ F+ M YG PS +H
Sbjct: 531 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKH 590
Query: 568 HACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINME 627
+ CMVD+ GRAGQ++ A K I+++ L DA ++G LLSAC++H + L ++A++ L +E
Sbjct: 591 YGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE 650
Query: 628 PKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSH 687
P++ G +VLLSN+YA+AGKW+ V ++RS +GL+KTPG S +E + +V F +Q+H
Sbjct: 651 PEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTH 710
Query: 688 PRSVDIYSILKVM 700
P ++Y L +
Sbjct: 711 PMYEEMYRELTAL 723
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 349 bits (895), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 213/698 (30%), Positives = 372/698 (53%), Gaps = 17/698 (2%)
Query: 7 LFHLLNIRKIPYIVAPFQTRFFTTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSS 63
L+ + + +P ++ F +LL C K + ++ ++H+ G H + +
Sbjct: 169 LYWNMRVEGVPLGLSSF-------PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVN 221
Query: 64 KLMDCYTKFGLPGLSQKVF-YFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMY 122
L+ Y K ++++F F E D+V++++IL + S G+ +TL L++EM
Sbjct: 222 ALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPA 281
Query: 123 PDEESCSFVLRSCFSVSHEQ-GKMVHAQIVKLGMDAFDL-VRNSLVELYEKNGFL-NAHE 179
P+ + L +C S+ + GK +HA ++K + +L V N+L+ +Y + G + A
Sbjct: 282 PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAER 341
Query: 180 PLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHL 239
L M+ ++ WN++I ++ +E + FS M + + +++ +++ ++ L
Sbjct: 342 ILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSN 401
Query: 240 LKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSA 299
L G LH+ +I L V L+ MY K F +M DL+ W +++
Sbjct: 402 LLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAG 461
Query: 300 YAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQ 359
YA N C E+LEL + + + D + + + LK K++H H++R G
Sbjct: 462 YAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LD 520
Query: 360 VSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKL 419
+ N L+D+Y C + A R+F+ I K VVSW++MI + A++ EA+ LF M
Sbjct: 521 TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVE 580
Query: 420 CGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEM 479
G D + ++ IL A + AL+ R +H Y +++ YA CG ++
Sbjct: 581 TGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQS 640
Query: 480 ARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTAC 539
A+ +FD + K ++ + SMI+AY HG EL+++M+ NV PD ++FL LL AC
Sbjct: 641 AKAVFD--RIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYAC 698
Query: 540 VNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARV 599
++GL+D+G+ K M Y +P EH+ C+VD+LGRA + EA + ++ + A V
Sbjct: 699 SHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEV 758
Query: 600 YGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRD 659
+ LL+AC+ HS+ + E+AAQ+L+ +EPKN GN VL+SN++A G+W+ V K+R+ ++
Sbjct: 759 WCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKA 818
Query: 660 RGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
G++K PGCSW+E +G+VH+F D+SHP S +IY L
Sbjct: 819 SGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKL 856
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 215/457 (47%), Gaps = 27/457 (5%)
Query: 126 ESCSFVLRSCFSV-SHEQGKMVHAQIVK-LGMDAFDLVRNSLVELYEKNGFLN-AHEPLE 182
E+ ++VL C + QG+ +H++I K D + LV +Y K G L+ A + +
Sbjct: 81 EAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 183 GMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKI 242
M WN MI +G+ L+ MR E + + LL++ L ++
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 243 GQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKM-PRNDLVVWNIMVSAYA 301
G LHSL++ + AL+SMY K L AR +F+ + D V+WN ++S+Y+
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 302 GNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGS-DYQV 360
+G E+LEL M +G P+ +T + A+++ + + GK++HA V+++ + ++
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 361 SVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLC 420
V NALI MY+ C + A RI + + VV+W+++IK + + EAL F +M
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 380
Query: 421 GTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCG-CIEM 479
G + D + + +I+ ++ L LH Y +L+ Y+KC M
Sbjct: 381 GHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYM 440
Query: 480 ARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTAC 539
R + KD+I+W ++I+ Y+++ + EL+ + ++ D++ +L A
Sbjct: 441 GRAFL---RMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRAS 497
Query: 540 ----------------VNSGLVDKGKEIFKEMVDLYG 560
+ GL+D I E+VD+YG
Sbjct: 498 SVLKSMLIVKEIHCHILRKGLLD--TVIQNELVDVYG 532
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 348 bits (894), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 206/628 (32%), Positives = 339/628 (53%), Gaps = 16/628 (2%)
Query: 80 KVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVS 139
++F D+ +++ +++ + G + + + Y MV + D + FV++S +S
Sbjct: 85 QLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGIS 144
Query: 140 H-EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMIS 197
E+GK +HA ++KLG + V NSL+ LY K G +A + E M ++ WN+MIS
Sbjct: 145 SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMIS 204
Query: 198 QAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNL-C 256
G LF M K +P+ + ++ L + ++ K+G+ +H + S +
Sbjct: 205 GYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIET 264
Query: 257 GELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCM 316
G++ V T++L MY K G + A +F M + ++V WN+M+ YA NG ++ M
Sbjct: 265 GDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKM 324
Query: 317 V-RSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNG 375
++G++PD+ T+I + + L+ G+ +H + +R G + + ALIDMY C
Sbjct: 325 SEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQ 380
Query: 376 LNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPT 435
L SA IFD + +K V+SW+++I A+ + + AL LF E+ D + +ILP
Sbjct: 381 LKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPA 440
Query: 436 FAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSH---K 492
+A+ +L R +H Y SL+ YA CG +E ARK F+ H K
Sbjct: 441 YAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFN-----HILLK 495
Query: 493 DIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIF 552
D+++WNS+I AY+ HG L+++M S V P++ TF LL AC SG+VD+G E F
Sbjct: 496 DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYF 555
Query: 553 KEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSD 612
+ M YG P EH+ CM+DL+GR G A + +E +P AR++G LL+A + H D
Sbjct: 556 ESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKD 615
Query: 613 PRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLE 672
+AE AA+++ ME N G YVLL N+YA AG+W+ V +++ + +G+ +T S +E
Sbjct: 616 ITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVE 675
Query: 673 SNGQVHEFRVADQSHPRSVDIYSILKVM 700
+ G+ H F D+SH + IY +L V+
Sbjct: 676 AKGKSHVFTNGDRSHVATNKIYEVLDVV 703
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 230/443 (51%), Gaps = 10/443 (2%)
Query: 176 NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTV 235
+A + + M+ + WN MI G E Q +SRM ++ ++ T +++S
Sbjct: 82 DALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVA 141
Query: 236 DLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNI 295
+ L+ G+ +H+++I ++ V +L+S+Y+KLG DA +FE+MP D+V WN
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNS 201
Query: 296 MVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNG 355
M+S Y G SL L M++ G +PD F+ + A+ + + + + GK++H H +R+
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR 261
Query: 356 SDY-QVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLF 414
+ V V +++DMYS ++ A RIF+ + + +V+W+ MI +A + + +A F
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCF 321
Query: 415 IEM-KLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAK 473
+M + G + D I IN+LP A + R +HGY ET+L+ Y +
Sbjct: 322 QKMSEQNGLQPDVITSINLLPASAILEG----RTIHGYAMRRGFLPHMVLETALIDMYGE 377
Query: 474 CGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFL 533
CG ++ A +FD + + K++I+WNS+I+AY ++G+ + EL+ ++ S++ PD T
Sbjct: 378 CGQLKSAEVIFD--RMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA 435
Query: 534 GLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPL 593
+L A S + +G+EI +V Y + +V + G +++A K + L
Sbjct: 436 SILPAYAESLSLSEGREIHAYIVKSR-YWSNTIILNSLVHMYAMCGDLEDARKCFNHILL 494
Query: 594 NSDARVYGPLLSACKMHSDPRLA 616
D + ++ A +H R++
Sbjct: 495 K-DVVSWNSIIMAYAVHGFGRIS 516
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 196/378 (51%), Gaps = 8/378 (2%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQF 103
++IHA G + + + L+ Y K G ++KVF D V +++++
Sbjct: 150 KKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLAL 209
Query: 104 GEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSV-SHEQGKMVHAQIVKLGMDAFD-LV 161
G+ +L L+KEM++ PD S L +C V S + GK +H V+ ++ D +V
Sbjct: 210 GDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMV 269
Query: 162 RNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKEN- 219
S++++Y K G ++ A GM + WN MI +G++ + F F +M ++N
Sbjct: 270 MTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNG 329
Query: 220 IQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDAR 279
+QP+ IT INLL ++ L G+ +H + + + TAL+ MY + G LK A
Sbjct: 330 LQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAE 385
Query: 280 LMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLK 339
++F++M +++ WN +++AY NG +LEL + S + PD T + + +
Sbjct: 386 VIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESL 445
Query: 340 HTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIK 399
G+++HA+++++ + N+L+ MY+ C L AR+ F+ I K VVSW+++I
Sbjct: 446 SLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIM 505
Query: 400 AHAVHDQCLEALSLFIEM 417
A+AVH ++ LF EM
Sbjct: 506 AYAVHGFGRISVWLFSEM 523
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 155/317 (48%), Gaps = 9/317 (2%)
Query: 275 LKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISS 334
++DA +F++M + D +WN+M+ + G E+++ MV +GV+ D FT I S
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 335 ITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSW 394
+ + E GK++HA VI+ G V V N+LI +Y A ++F+ + ++ +VSW
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 395 SAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXX 454
++MI + +L LF EM CG + D ++ L + + + + +H +
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 455 XXXXX-XXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQC 513
TS+L Y+K G + A ++F+ ++I+AWN MI Y+++G
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFN--GMIQRNIVAWNVMIGCYARNGRVTDA 317
Query: 514 FELYNQMKLSN-VKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMV 572
F + +M N ++PD +T + LL A + +G+ I + G+ P ++
Sbjct: 318 FLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMR-RGFLPHMVLETALI 372
Query: 573 DLLGRAGQIDEASKIIE 589
D+ G GQ+ A I +
Sbjct: 373 DMYGECGQLKSAEVIFD 389
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 345 bits (886), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 203/676 (30%), Positives = 346/676 (51%), Gaps = 7/676 (1%)
Query: 28 FTTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
+ SS+L C K + L+ Q+H G ++ + + L+ Y G ++ +F
Sbjct: 289 YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN 348
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHE-QG 143
D+V Y+ ++ LSQ G EK + L+K M + PD + + ++ +C + +G
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Query: 144 KMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFES 202
+ +HA KLG + + + +L+ LY K + A + V + WN M+
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 203 GKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN 262
+ F++F +M+ E I PN T ++L++ + L L++G+ +HS II +N V
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVC 528
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
+ L+ MY KLG L A + + D+V W M++ Y ++L M+ G+R
Sbjct: 529 SVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 323 PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRI 382
D A+S+ L+ + G+Q+HA +G + NAL+ +YS C + +
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLA 648
Query: 383 FDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGAL 442
F+ ++W+A++ EAL +F+ M G + + + ++ +
Sbjct: 649 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANM 708
Query: 443 HYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMIS 502
+ +H +L++ YAKCG I A K F E S K+ ++WN++I+
Sbjct: 709 KQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE--VSTKNEVSWNAIIN 766
Query: 503 AYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQ 562
AYSKHG + + ++QM SNV+P+ VT +G+L+AC + GLVDKG F+ M YG
Sbjct: 767 AYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLS 826
Query: 563 PSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQK 622
P EH+ C+VD+L RAG + A + I+ +P+ DA V+ LLSAC +H + + E AA
Sbjct: 827 PKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHH 886
Query: 623 LINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRV 682
L+ +EP+++ YVLLSN+YA + KWD R ++++G+KK PG SW+E +H F V
Sbjct: 887 LLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYV 946
Query: 683 ADQSHPRSVDIYSILK 698
DQ+HP + +I+ +
Sbjct: 947 GDQNHPLADEIHEYFQ 962
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 164/668 (24%), Positives = 307/668 (45%), Gaps = 23/668 (3%)
Query: 11 LNIRKIPYIVAPFQTRFFTTSSLLDLCTKP----QHLQQIHARFFLHGLHQNSSLSSKLM 66
L +R + V P + F S +L+ C ++QIHAR GL ++ + + L+
Sbjct: 173 LFVRMVSENVTPNEGTF---SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLI 229
Query: 67 DCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEE 126
D Y++ G L+++VF D + A++ LS+ + + L+ +M + P
Sbjct: 230 DLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPY 289
Query: 127 SCSFVLRSCFSV-SHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNG-FLNAHEPLEGM 184
+ S VL +C + S E G+ +H ++KLG + V N+LV LY G ++A M
Sbjct: 290 AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
Query: 185 SVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQ 244
S + +N +I+ + G E+ +LF RM + ++P+S T+ +L+ + L GQ
Sbjct: 350 SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409
Query: 245 ALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNG 304
LH+ + ALL++Y K ++ A F + ++V+WN+M+ AY
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 305 CPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHN 364
+ S + M + P+ +T + + +L E G+Q+H+ +I+ V +
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 365 ALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRV 424
LIDMY+ L++A I K VVSW+ MI + ++ +AL+ F +M G R
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589
Query: 425 DFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLF 484
D + + N + A + AL + +H + +L+ Y++CG IE + F
Sbjct: 590 DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 649
Query: 485 DEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGL 544
++ ++ D IAWN+++S + + G + ++ +M + + TF + A +
Sbjct: 650 EQTEAG--DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETAN 707
Query: 545 VDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLL 604
+ +GK++ ++ GY E ++ + + G I +A K V ++ + ++
Sbjct: 708 MKQGKQV-HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS-WNAII 765
Query: 605 SACKMHSDPRLAEVAAQKLI--NMEPKNAGNYVLLSNIYAAA---GKWDK-VAKMRSFLR 658
+A H A + ++I N+ P N+V L + +A G DK +A S
Sbjct: 766 NAYSKHGFGSEALDSFDQMIHSNVRP----NHVTLVGVLSACSHIGLVDKGIAYFESMNS 821
Query: 659 DRGLKKTP 666
+ GL P
Sbjct: 822 EYGLSPKP 829
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 150/625 (24%), Positives = 289/625 (46%), Gaps = 16/625 (2%)
Query: 29 TTSSLLDLCTKPQ----HLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
T LL+ C K +++H++ GL N LS KL D Y G + KV F
Sbjct: 86 TLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKV--F 143
Query: 85 TENPDSVIYS--AILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCF--SVSH 140
E P+ I++ +++ L+ + L+ MV +++ P+E + S VL +C SV+
Sbjct: 144 DEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAF 203
Query: 141 EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQA 199
+ + +HA+I+ G+ +V N L++LY +NGF++ A +G+ + + + W MIS
Sbjct: 204 DVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGL 263
Query: 200 FESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGEL 259
++ E +LF M I P ++L + + L+IG+ LH L++ +
Sbjct: 264 SKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 323
Query: 260 TVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRS 319
V AL+S+Y LG+L A +F M + D V +N +++ + G ++++EL M
Sbjct: 324 YVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD 383
Query: 320 GVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSA 379
G+ PD T + + + G+Q+HA+ + G + AL+++Y+ C + +A
Sbjct: 384 GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA 443
Query: 380 RRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKI 439
F + VV W+ M+ A+ + D + +F +M++ + +IL T ++
Sbjct: 444 LDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL 503
Query: 440 GALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNS 499
G L +H + L+ YAK G ++ A + + + KD+++W +
Sbjct: 504 GDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI--RFAGKDVVSWTT 561
Query: 500 MISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLY 559
MI+ Y+++ + + QM ++ D+V ++AC + +G++I + +
Sbjct: 562 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC-VS 620
Query: 560 GYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVA 619
G+ +V L R G+I+E+ E D + L+S + + A
Sbjct: 621 GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA-GDNIAWNALVSGFQQSGNNEEALRV 679
Query: 620 AQKLINMEPKNAGNYVLLSNIYAAA 644
++ N E + N+ S + AA+
Sbjct: 680 FVRM-NREGIDNNNFTFGSAVKAAS 703
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 225/474 (47%), Gaps = 7/474 (1%)
Query: 119 KSMYPDEESCSFVLRSCFSV--SHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL- 175
+ + P+ ++ ++L C S ++G+ +H+QI+KLG+D+ + L + Y G L
Sbjct: 78 RGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLY 137
Query: 176 NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTV 235
A + + M + WN MI + + E F LF RM EN+ PN T +L +
Sbjct: 138 GAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR 197
Query: 236 DLHL-LKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWN 294
+ + + +H+ I+ L V L+ +Y + G + AR +F+ + D W
Sbjct: 198 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 295 IMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRN 354
M+S + N C E++ L M G+ P + +S+ +++ E G+Q+H V++
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 355 GSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLF 414
G V NAL+ +Y L SA IF ++ + V+++ +I + +A+ LF
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 415 IEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKC 474
M L G D + +++ + G L + LH Y E +LL YAKC
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 437
Query: 475 GCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLG 534
IE A F E + ++++ WN M+ AY + F ++ QM++ + P+Q T+
Sbjct: 438 ADIETALDYFLE--TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPS 495
Query: 535 LLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKII 588
+L C+ G ++ G++I +++ +Q + + ++D+ + G++D A I+
Sbjct: 496 ILKTCIRLGDLELGEQIHSQIIKT-NFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 345 bits (884), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 202/658 (30%), Positives = 349/658 (53%), Gaps = 8/658 (1%)
Query: 45 QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFG 104
Q+ + G ++ + + L+D Y K G ++ VF +V ++ ++ + G
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 105 EHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDLVRN 163
+L L+ +++E ++ PD S VL +C + E GK +HA I++ G++ + N
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 164 SLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQP 222
L++ Y K G + AH+ GM + W ++S ++ +E +LF+ M K ++P
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 223 NSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMF 282
+ ++L S LH L G +H+ I +NL + V +L+ MY K L DAR +F
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF 408
Query: 283 EKMPRNDLVVWNIMVSAYAGNGCP---KESLELVYCMVRSGVRPDMFTAIPAISSITQLK 339
+ D+V++N M+ Y+ G E+L + M +RP + T + + + L
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLT 468
Query: 340 HTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIK 399
KQ+H + + G + + +ALID+YS C L +R +FD + K +V W++M
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFA 528
Query: 400 AHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXX 459
+ + EAL+LF+E++L R D N++ + ++ + H
Sbjct: 529 GYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLEC 588
Query: 460 XXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQ 519
+LL YAKCG E A K FD S +D++ WNS+IS+Y+ HGE + ++ +
Sbjct: 589 NPYITNALLDMYAKCGSPEDAHKAFDSAAS--RDVVCWNSVISSYANHGEGKKALQMLEK 646
Query: 520 MKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAG 579
M ++P+ +TF+G+L+AC ++GLV+ G + F+ M+ +G +P EH+ CMV LLGRAG
Sbjct: 647 MMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAG 705
Query: 580 QIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSN 639
++++A ++IE +P A V+ LLS C + LAE AA+ I +PK++G++ +LSN
Sbjct: 706 RLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSN 765
Query: 640 IYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
IYA+ G W + K+R ++ G+ K PG SW+ N +VH F D+SH ++ IY +L
Sbjct: 766 IYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVL 823
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 153/608 (25%), Positives = 303/608 (49%), Gaps = 18/608 (2%)
Query: 46 IHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGE 105
+H + + GL ++ LS+ L++ Y++ G ++KVF + V +S ++ + G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 106 HEKTLFLYKEMVE-KSMYPDEESCSFVLRSCFSVSHEQGKMV---HAQIVKLGMDAFDLV 161
+E++L ++ E + P+E S +++C + MV + +VK G D V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 162 RNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENI 220
L++ Y K+G ++ A + + W MIS + G+ QLF ++ ++N+
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 221 QPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARL 280
P+ + +L + L L+ G+ +H+ I+ L + ++ L+ YVK G + A
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHK 305
Query: 281 MFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKH 340
+F MP +++ W ++S Y N KE++EL M + G++PDM+ ++S L
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHA 365
Query: 341 TEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKA 400
+G Q+HA+ I+ V N+LIDMY+ C+ L AR++FD+ VV ++AMI+
Sbjct: 366 LGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEG 425
Query: 401 HA---VHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXX 457
++ + EAL++F +M+ R + +++L A + +L + +HG
Sbjct: 426 YSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGL 485
Query: 458 XXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELY 517
++L+ Y+ C C++ +R +FDE K KD++ WNSM + Y + E + L+
Sbjct: 486 NLDIFAGSALIDVYSNCYCLKDSRLVFDEMKV--KDLVIWNSMFAGYVQQSENEEALNLF 543
Query: 518 NQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGR 577
+++LS +PD+ TF ++TA N V G+E +++ G + + ++D+ +
Sbjct: 544 LELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLK-RGLECNPYITNALLDMYAK 602
Query: 578 AGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLIN--MEPKNAGNYV 635
G ++A K ++ + D + ++S+ H + + A +K+++ +EP NY+
Sbjct: 603 CGSPEDAHKAFDSAA-SRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEP----NYI 657
Query: 636 LLSNIYAA 643
+ +A
Sbjct: 658 TFVGVLSA 665
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 261/538 (48%), Gaps = 14/538 (2%)
Query: 28 FTTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
+ S++L C+ L+ QIHA +GL ++SL + L+D Y K G + K+F
Sbjct: 250 YILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNG 309
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSV-SHEQG 143
N + + ++ +L Q H++ + L+ M + + PD +CS +L SC S+ + G
Sbjct: 310 MPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFG 369
Query: 144 KMVHAQIVK--LGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAF 200
VHA +K LG D++ V NSL+++Y K + +A + + + ++ +N MI
Sbjct: 370 TQVHAYTIKANLGNDSY--VTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYS 427
Query: 201 ESG---KMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCG 257
G ++ E +F MR I+P+ +T ++LLR++ L L + + +H L+ L
Sbjct: 428 RLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNL 487
Query: 258 ELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMV 317
++ +AL+ +Y LKD+RL+F++M DLV+WN M + Y +E+L L +
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQ 547
Query: 318 RSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLN 377
S RPD FT +++ L + G++ H +++ G + + NAL+DMY+ C
Sbjct: 548 LSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPE 607
Query: 378 SARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFA 437
A + FD + VV W+++I ++A H + +AL + +M G ++I + +L +
Sbjct: 608 DAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACS 667
Query: 438 KIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAW 497
G + +++ + G + AR+L ++ + I+ W
Sbjct: 668 HAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIV-W 726
Query: 498 NSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEM 555
S++S +K G + E +M + + D +F L + G+ + K++ + M
Sbjct: 727 RSLLSGCAKAGN-VELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERM 783
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 212/429 (49%), Gaps = 14/429 (3%)
Query: 132 LRSCFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELA 190
LR+ + H Q +VH QI+ G++ + N L+ LY + G + A + E M L
Sbjct: 53 LRASDDLLHYQ-NVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLV 111
Query: 191 YWNNMISQAFESGKMEE---CFQLFSRMRKENIQPNSITVINLLR--STVDLHLLKIGQA 245
W+ M+S G EE F F R RK++ PN + + ++ S +D +
Sbjct: 112 SWSTMVSACNHHGIYEESLVVFLEFWRTRKDS--PNEYILSSFIQACSGLDGRGRWMVFQ 169
Query: 246 LHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGC 305
L S ++ S ++ V T L+ Y+K G++ ARL+F+ +P V W M+S G
Sbjct: 170 LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGR 229
Query: 306 PKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNA 365
SL+L Y ++ V PD + +S+ + L E GKQ+HAH++R G + S+ N
Sbjct: 230 SYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNV 289
Query: 366 LIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVD 425
LID Y C + +A ++F+ + +K ++SW+ ++ + + EA+ LF M G + D
Sbjct: 290 LIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPD 349
Query: 426 FIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFD 485
+IL + A + AL + +H Y SL+ YAKC C+ ARK+FD
Sbjct: 350 MYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD 409
Query: 486 EGKSSHKDIIAWNSMISAYSKHG---EWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNS 542
++ D++ +N+MI YS+ G E + ++ M+ ++P +TF+ LL A +
Sbjct: 410 IFAAA--DVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASL 467
Query: 543 GLVDKGKEI 551
+ K+I
Sbjct: 468 TSLGLSKQI 476
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 345 bits (884), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 195/580 (33%), Positives = 313/580 (53%), Gaps = 47/580 (8%)
Query: 163 NSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQ 221
NS+V K GFL+ + L M + WN+M+S + + EE F+ M KE
Sbjct: 90 NSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFV 149
Query: 222 PNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLM 281
N + ++L + L+ + G +HSLI S ++ + +AL+ MY K G++ DA+ +
Sbjct: 150 LNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRV 209
Query: 282 FEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHT 341
F++M ++V WN +++ + NG E+L++ M+ S V PD T IS+ L
Sbjct: 210 FDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAI 269
Query: 342 EWGKQMHAHVIRNGS-DYQVSVHNALIDMYSACNGLNSARRIFD---------------- 384
+ G+++H V++N + + NA +DMY+ C+ + AR IFD
Sbjct: 270 KVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISG 329
Query: 385 ---------------LITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMK---LCGTRVDF 426
+ ++ VVSW+A+I + + + EALSLF +K +C T F
Sbjct: 330 YAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSF 389
Query: 427 IIVINILPTFAKIGALH-----YVRYL-HGYXXXXXXXXXXXXETSLLASYAKCGCIEMA 480
NIL A + LH +V L HG+ SL+ Y KCGC+E
Sbjct: 390 A---NILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEG 446
Query: 481 RKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACV 540
+F K +D ++WN+MI ++++G + EL+ +M S KPD +T +G+L+AC
Sbjct: 447 YLVFR--KMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACG 504
Query: 541 NSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVY 600
++G V++G+ F M +G P ++H+ CMVDLLGRAG ++EA +IE +P+ D+ ++
Sbjct: 505 HAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIW 564
Query: 601 GPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDR 660
G LL+ACK+H + L + A+KL+ +EP N+G YVLLSN+YA GKW+ V +R +R
Sbjct: 565 GSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKE 624
Query: 661 GLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILKVM 700
G+ K PGCSW++ G H F V D+SHPR I+S+L ++
Sbjct: 625 GVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDIL 664
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 136/560 (24%), Positives = 243/560 (43%), Gaps = 81/560 (14%)
Query: 28 FTTSS----LLDLCTKPQ----HLQQIHARFFLHGLHQNSSLSSKLMDCYTKFG------ 73
FT SS LLD C K + +++ +HA G + ++L+D Y+K G
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR 75
Query: 74 --LPGLSQKVFY-------------FTENPDSVIYSAILRN-------LSQFGEH---EK 108
+ Q+ Y F + DS+ S R+ +S F +H E+
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135
Query: 109 TLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDLVRNSLVE 167
L + M ++ +E S + VL +C ++ +G VH+ I K + + ++LV+
Sbjct: 136 ALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVD 195
Query: 168 LYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSIT 226
+Y K G +N A + M + WN++I+ ++G E +F M + ++P+ +T
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255
Query: 227 VINLLRSTVDLHLLKIGQALHSLIIVSN-LCGELTVNTALLSMYVKLGSLKDAR------ 279
+ +++ + L +K+GQ +H ++ ++ L ++ ++ A + MY K +K+AR
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 280 -------------------------LMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVY 314
LMF KM ++V WN +++ Y NG +E+L L
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375
Query: 315 CMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQ------VSVHNALID 368
+ R V P ++ + + L G Q H HV+++G +Q + V N+LID
Sbjct: 376 LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLID 435
Query: 369 MYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFII 428
MY C + +F + ++ VSW+AMI A + EAL LF EM G + D I
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495
Query: 429 VINILPTFAKIGALHYVR-YLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEG 487
+I +L G + R Y T ++ + G +E A+ + +E
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEE- 554
Query: 488 KSSHKDIIAWNSMISAYSKH 507
D + W S+++A H
Sbjct: 555 MPMQPDSVIWGSLLAACKVH 574
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 345 KQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTV------------- 391
+ +HA VI++G ++ + N LID YS C L R++FD + + +
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 392 ------------------VSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINIL 433
+W++M+ A HD+C EAL F M G ++ ++L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 434 PTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKD 493
+ + ++ +H ++L+ Y+KCG + A+++FDE ++
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDE--MGDRN 217
Query: 494 IIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFK 553
+++WNS+I+ + ++G + +++ M S V+PD+VT +++AC + + G+E+
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 554 EMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPL 593
+V + VD+ + +I EA I +++P+
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 344 bits (883), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 202/684 (29%), Positives = 366/684 (53%), Gaps = 9/684 (1%)
Query: 21 APFQTRFFTTSSLLDLCTKPQHLQQ---IHARFFLHGLHQNSSLSSKLMDCYTKFGLPGL 77
+ F+ R T SL+ C+ + L Q IH ++ L++ ++ Y K G
Sbjct: 61 SSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRD 120
Query: 78 SQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFS 137
+++VF F + V Y++++ SQ G+ + + LY +M+++ + PD+ + ++++C S
Sbjct: 121 AREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACAS 180
Query: 138 VSHEQ-GKMVHAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNNM 195
S GK +HAQ++KL + + +N+L+ +Y + N +A G+ + +L W+++
Sbjct: 181 SSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSI 240
Query: 196 ISQAFESGKMEECFQLFSRMRKENI-QPNSITVINLLRSTVDLHLLKIGQALHSLIIVSN 254
I+ + G E M + PN + L++ L G +H L I S
Sbjct: 241 IAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSE 300
Query: 255 LCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVY 314
L G +L MY + G L AR +F+++ R D WN++++ A NG E++ +
Sbjct: 301 LAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFS 360
Query: 315 CMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACN 374
M SG PD + + + T+ G Q+H+++I+ G ++V N+L+ MY+ C+
Sbjct: 361 QMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCS 420
Query: 375 GLNSARRIF-DLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINIL 433
L +F D + VSW+ ++ A H+Q +E L LF M + D I + N+L
Sbjct: 421 DLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLL 480
Query: 434 PTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKD 493
+I +L +H Y + L+ YAKCG + AR++FD ++D
Sbjct: 481 RGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFD--SMDNRD 538
Query: 494 IIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFK 553
+++W+++I Y++ G + L+ +MK + ++P+ VTF+G+LTAC + GLV++G +++
Sbjct: 539 VVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYA 598
Query: 554 EMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDP 613
M +G P++EH +C+VDLL RAG+++EA + I+ + L D V+ LLSACK +
Sbjct: 599 TMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNV 658
Query: 614 RLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLES 673
LA+ AA+ ++ ++P N+ +VLL +++A++G W+ A +RS ++ +KK PG SW+E
Sbjct: 659 HLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEI 718
Query: 674 NGQVHEFRVADQSHPRSVDIYSIL 697
++H F D HP DIY++L
Sbjct: 719 EDKIHIFFAEDIFHPERDDIYTVL 742
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 343 bits (881), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 207/693 (29%), Positives = 360/693 (51%), Gaps = 12/693 (1%)
Query: 13 IRKIPYIVAPFQTRFFTTSSLLDL---CTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCY 69
+R + A + ++ LD T HL Q HA+ LHG + SL +KL
Sbjct: 3 LRTVSSATAETTAALISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRL 62
Query: 70 TKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKS-MYPDEESC 128
+ G ++ +F + PD +++ ++R S +L ++ + + + + P+ +
Sbjct: 63 SDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTY 122
Query: 129 SFVLRSCFSVSHEQ-GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSV 186
+F + + ++ G+++H Q V G D+ L+ +++V++Y K + +A + + M
Sbjct: 123 AFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE 182
Query: 187 TELAYWNNMISQAFESGKMEECFQLFSRMRKEN-IQPNSITVINLLRSTVDLHLLKIGQA 245
+ WN MIS ++ E Q+F + E+ + ++ T++++L + +L L++G
Sbjct: 183 KDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQ 242
Query: 246 LHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGC 305
+HSL + V T +S+Y K G +K +F + + D+V +N M+ Y NG
Sbjct: 243 IHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGE 302
Query: 306 PKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNA 365
+ SL L ++ SG R + +S + H +H + +++ SV A
Sbjct: 303 TELSLSLFKELMLSGAR---LRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTA 359
Query: 366 LIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVD 425
L +YS N + SAR++FD +K++ SW+AMI + + +A+SLF EM+ +
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPN 419
Query: 426 FIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFD 485
+ + IL A++GAL +++H T+L+ YAKCG I AR+LFD
Sbjct: 420 PVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD 479
Query: 486 EGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLV 545
+ K+ + WN+MIS Y HG+ + ++ +M S + P VTFL +L AC ++GLV
Sbjct: 480 --LMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLV 537
Query: 546 DKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLS 605
+G EIF M+ YG++PS +H+ACMVD+LGRAG + A + IE + + + V+ LL
Sbjct: 538 KEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLG 597
Query: 606 ACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKT 665
AC++H D LA ++KL ++P N G +VLLSNI++A + + A +R + R L K
Sbjct: 598 ACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKA 657
Query: 666 PGCSWLESNGQVHEFRVADQSHPRSVDIYSILK 698
PG + +E H F DQSHP+ +IY L+
Sbjct: 658 PGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLE 690
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 342 bits (877), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 202/645 (31%), Positives = 343/645 (53%), Gaps = 10/645 (1%)
Query: 33 LLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVI 92
LL CT L+Q H +GL + S+++KL+ Y FG ++ VF PD +
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYL 109
Query: 93 YSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIV 151
+ +LR E + + LY +++ D+ S L++C + + GK +H Q+V
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV 169
Query: 152 KLGMDAFD-LVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECF 209
K+ +FD +V L+++Y K G + +AH+ +++ + W +MI+ ++ EE
Sbjct: 170 KV--PSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGL 227
Query: 210 QLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMY 269
LF+RMR+ N+ N T L+ + L L G+ H ++ S + + T+LL MY
Sbjct: 228 VLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMY 287
Query: 270 VKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAI 329
VK G + +AR +F + DLV+W M+ Y NG E+L L M ++P+ T
Sbjct: 288 VKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIA 347
Query: 330 PAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDK 389
+S +++ E G+ +H I+ G + +V NAL+ MY+ C A+ +F++ ++K
Sbjct: 348 SVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEK 406
Query: 390 TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLH 449
+V+W+++I + + EAL LF M + + V ++ A +G+L LH
Sbjct: 407 DIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLH 466
Query: 450 GYXXXXXXXXXXXXE--TSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKH 507
Y T+LL YAKCG + AR +FD K+ I W++MI Y K
Sbjct: 467 AYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFD--TIEEKNTITWSAMIGGYGKQ 524
Query: 508 GEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEH 567
G+ EL+ +M KP++ TF +L+AC ++G+V++GK+ F M Y + PS +H
Sbjct: 525 GDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKH 584
Query: 568 HACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINME 627
+ CMVD+L RAG++++A IIE +P+ D R +G L C MHS L E+ +K++++
Sbjct: 585 YTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLH 644
Query: 628 PKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLE 672
P +A YVL+SN+YA+ G+W++ ++R+ ++ RGL K G S +E
Sbjct: 645 PDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 341 bits (875), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 202/665 (30%), Positives = 350/665 (52%), Gaps = 30/665 (4%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQF 103
+Q+H + G + S+ + L+D Y K +KVF + + V ++ ++ ++
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 104 GEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGK-----MVHAQIVKLGMDAF 158
+++ L L+ M + P+ SF + V E+G VH +VK G+D
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPN----SFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 228
Query: 159 DLVRNSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRK 217
V NSL+ LY K G + L + V + WN+MIS +G E +F MR
Sbjct: 229 IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 288
Query: 218 ENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKD 277
++ + + ++++ +L L+ + LH ++ + + TAL+ Y K ++ D
Sbjct: 289 NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLD 348
Query: 278 ARLMFEKMP-RNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFT------AIP 330
A +F+++ ++V W M+S + N +E+++L M R GVRP+ FT A+P
Sbjct: 349 ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP 408
Query: 331 AISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKT 390
IS ++HA V++ + +V AL+D Y + A ++F I DK
Sbjct: 409 VISP----------SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKD 458
Query: 391 VVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGA-LHYVRYLH 449
+V+WSAM+ +A + A+ +F E+ G + + +IL A A + + H
Sbjct: 459 IVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFH 518
Query: 450 GYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGE 509
G+ ++LL YAK G IE A ++F + KD+++WNSMIS Y++HG+
Sbjct: 519 GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK--RQREKDLVSWNSMISGYAQHGQ 576
Query: 510 WFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHA 569
+ +++ +MK VK D VTF+G+ AC ++GLV++G++ F MV P++EH++
Sbjct: 577 AMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNS 636
Query: 570 CMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPK 629
CMVDL RAGQ+++A K+IE +P + + ++ +L+AC++H L +AA+K+I M+P+
Sbjct: 637 CMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPE 696
Query: 630 NAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPR 689
++ YVLLSN+YA +G W + AK+R + +R +KK PG SW+E + + F D+SHP
Sbjct: 697 DSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPL 756
Query: 690 SVDIY 694
IY
Sbjct: 757 KDQIY 761
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 223/464 (48%), Gaps = 17/464 (3%)
Query: 84 FTENP--DSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHE 141
F ++P D Y ++L S+ G ++ L+ + M D S VL+ ++ E
Sbjct: 50 FDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDE 109
Query: 142 Q-GKMVHAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQA 199
G+ +H Q +K G V SLV+ Y K + F + + + M + W +IS
Sbjct: 110 LFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGY 169
Query: 200 FESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGEL 259
+ +E LF RM+ E QPNS T L + + G +H++++ + L +
Sbjct: 170 ARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTI 229
Query: 260 TVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRS 319
V+ +L+++Y+K G+++ AR++F+K +V WN M+S YA NG E+L + Y M +
Sbjct: 230 PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLN 289
Query: 320 GVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSA 379
VR + I LK + +Q+H V++ G + ++ AL+ YS C + A
Sbjct: 290 YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 349
Query: 380 RRIFDLIT-DKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVD---FIIVINILPT 435
R+F I VVSW+AMI +D EA+ LF EMK G R + + +++ LP
Sbjct: 350 LRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV 409
Query: 436 FAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDII 495
+ +H T+LL +Y K G +E A K+F KDI+
Sbjct: 410 ISP-------SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS--GIDDKDIV 460
Query: 496 AWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTAC 539
AW++M++ Y++ GE +++ ++ +KP++ TF +L C
Sbjct: 461 AWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 195/389 (50%), Gaps = 6/389 (1%)
Query: 203 GKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN 262
G+ +E +LF + + ++ + ++L+ + L G+ LH I +++V
Sbjct: 72 GRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVG 131
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
T+L+ Y+K + KD R +F++M ++V W ++S YA N E L L M G +
Sbjct: 132 TSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ 191
Query: 323 PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRI 382
P+ FT A+ + + G Q+H V++NG D + V N+LI++Y C + AR +
Sbjct: 192 PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARIL 251
Query: 383 FDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGAL 442
FD K+VV+W++MI +A + LEAL +F M+L R+ +++ A + L
Sbjct: 252 FDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKEL 311
Query: 443 HYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMIS 502
+ LH T+L+ +Y+KC + A +LF E ++++W +MIS
Sbjct: 312 RFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKE-IGCVGNVVSWTAMIS 370
Query: 503 AYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQ 562
+ ++ + +L+++MK V+P++ T+ +LTA V E+ ++V Y+
Sbjct: 371 GFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISPSEVHAQVVKT-NYE 425
Query: 563 PSQEHHACMVDLLGRAGQIDEASKIIETV 591
S ++D + G+++EA+K+ +
Sbjct: 426 RSSTVGTALLDAYVKLGKVEEAAKVFSGI 454
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 96/220 (43%), Gaps = 3/220 (1%)
Query: 376 LNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPT 435
L +A +FD + S+ +++ + + EA LF+ + G +D I ++L
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 436 FAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDII 495
A + + R LH TSL+ +Y K + RK+FDE K ++++
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK--ERNVV 160
Query: 496 AWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEM 555
W ++IS Y+++ + L+ +M+ +P+ TF L G+ +G ++ +
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220
Query: 556 VDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNS 595
V G + +++L + G + +A + + + S
Sbjct: 221 VK-NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS 259
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 340 bits (871), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 204/659 (30%), Positives = 348/659 (52%), Gaps = 7/659 (1%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVI-YSAILRNLSQ 102
+QIH + L +S L + L+D Y KFGL + +VF E+ +V+ ++ ++
Sbjct: 190 KQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGG 249
Query: 103 FGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQIVKLGMDAFDLV 161
G E +L LY S+ S + L +C + G+ +H +VK+G+ V
Sbjct: 250 SGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYV 309
Query: 162 RNSLVELYEKNGFLNAHEPLEGMSVTE-LAYWNNMISQAFESGKMEECFQLFSRMRKENI 220
SL+ +Y K G + E + V + L WN M++ E+ LF MR++++
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV 369
Query: 221 QPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARL 280
P+S T+ N++ L L G+++H+ + + T+ +ALL++Y K G DA L
Sbjct: 370 LPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYL 429
Query: 281 MFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRS--GVRPDMFTAIPAISSITQL 338
+F+ M D+V W ++S NG KE+L++ M ++PD ++ L
Sbjct: 430 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGL 489
Query: 339 KHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMI 398
+ +G Q+H +I+ G V V ++LID+YS C A ++F ++ + +V+W++MI
Sbjct: 490 EALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMI 549
Query: 399 KAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXX 458
++ ++ ++ LF M G D + + ++L + +L + LHGY
Sbjct: 550 SCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIP 609
Query: 459 XXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYN 518
+ +L+ Y KCG + A +F K HK +I WN MI Y HG+ L++
Sbjct: 610 SDTHLKNALIDMYVKCGFSKYAENIFK--KMQHKSLITWNLMIYGYGSHGDCITALSLFD 667
Query: 519 QMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRA 578
+MK + PD VTFL L++AC +SG V++GK IF+ M YG +P+ EH+A MVDLLGRA
Sbjct: 668 EMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRA 727
Query: 579 GQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLS 638
G ++EA I+ +P+ +D+ ++ LLSA + H + L ++A+KL+ MEP+ YV L
Sbjct: 728 GLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLI 787
Query: 639 NIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
N+Y AG ++ AK+ ++++GL K PGCSW+E + + + F S P +I+++L
Sbjct: 788 NLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVL 846
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 152/592 (25%), Positives = 272/592 (45%), Gaps = 32/592 (5%)
Query: 21 APFQTRFFTTSSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGL 77
+PF T FT SLL C+ +L + IH + G + +++ L++ Y K G
Sbjct: 54 SPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDY 113
Query: 78 SQKVF-------YFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSF 130
+ +VF D ++++++ +F ++ + ++ M+ + PD S S
Sbjct: 114 AVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSI 173
Query: 131 VLRSCF---SVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGF-LNAHEP-LEGMS 185
V+ + E+GK +H +++ +D ++ +L+++Y K G ++A +E
Sbjct: 174 VVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIED 233
Query: 186 VTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQA 245
+ + WN MI SG E L+ + +++ S + L + G+
Sbjct: 234 KSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQ 293
Query: 246 LHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGC 305
+H ++ L + V T+LLSMY K G + +A +F + L +WN MV+AYA N
Sbjct: 294 IHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDY 353
Query: 306 PKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNA 365
+L+L M + V PD FT IS + L +GK +HA + + ++ +A
Sbjct: 354 GYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESA 413
Query: 366 LIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMK--LCGTR 423
L+ +YS C A +F + +K +V+W ++I + + EAL +F +MK +
Sbjct: 414 LLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLK 473
Query: 424 VDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKL 483
D I+ ++ A + AL + +HG +SL+ Y+KCG EMA K+
Sbjct: 474 PDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKV 533
Query: 484 FDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSG 543
F S ++++AWNSMIS YS++ +L+N M + PD V+ +L A ++
Sbjct: 534 FTS--MSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTA 591
Query: 544 LVDKGKEIFKEMVDLYGYQ-----PSQEH-HACMVDLLGRAGQIDEASKIIE 589
+ KGK L+GY PS H ++D+ + G A I +
Sbjct: 592 SLLKGKS-------LHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFK 636
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 251/511 (49%), Gaps = 20/511 (3%)
Query: 97 LRNLSQFGEHEKTLFLYKEMVEKS-MYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLG 154
+R L Q GE+ + L LY + S + + +L++C ++++ GK +H +V LG
Sbjct: 31 IRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLG 90
Query: 155 MDAFDLVRNSLVELYEKNGFLNA--------HEPLEGMSVTELAYWNNMISQAFESGKME 206
+ SLV +Y K GFL+ + G+S ++ WN+MI F+ + +
Sbjct: 91 WRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFK 150
Query: 207 ECFQLFSRMRKENIQPNSIT---VINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNT 263
E F RM ++P++ + V++++ + + G+ +H ++ ++L + + T
Sbjct: 151 EGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREE-GKQIHGFMLRNSLDTDSFLKT 209
Query: 264 ALLSMYVKLGSLKDA-RLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
AL+ MY K G DA R+ E ++++V+WN+M+ + G+G + SL+L + V+
Sbjct: 210 ALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVK 269
Query: 323 PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRI 382
+ A+ + +Q +++ +G+Q+H V++ G V +L+ MYS C + A +
Sbjct: 270 LVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETV 329
Query: 383 FDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGAL 442
F + DK + W+AM+ A+A +D AL LF M+ D + N++ + +G
Sbjct: 330 FSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLY 389
Query: 443 HYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMIS 502
+Y + +H E++LL Y+KCGC A +F + KD++AW S+IS
Sbjct: 390 NYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSME--EKDMVAWGSLIS 447
Query: 503 AYSKHGEWFQCFELYNQMKLSN--VKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYG 560
K+G++ + +++ MK + +KPD + AC + G ++ M+ G
Sbjct: 448 GLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-G 506
Query: 561 YQPSQEHHACMVDLLGRAGQIDEASKIIETV 591
+ + ++DL + G + A K+ ++
Sbjct: 507 LVLNVFVGSSLIDLYSKCGLPEMALKVFTSM 537
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 337 bits (865), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 301/544 (55%), Gaps = 3/544 (0%)
Query: 146 VHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGK 204
+H+ IVKLG D+ V +L+ Y G ++ A EG+ ++ W ++S E+G
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 205 MEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTA 264
E+ +L S MR PN+ T L++++ L + +H I+ + + V
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 265 LLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPD 324
LL +Y +LG + DA +F +MP+ND+V W+ M++ + NG E+++L M + V P+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 325 MFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFD 384
FT ++ K + G+Q+H V++ G D + V NALID+Y+ C +++A ++F
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 385 LITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHY 444
++ K VSW+ +I + + +A S+F E V + + L A + ++
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467
Query: 445 VRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAY 504
+HG SL+ YAKCG I+ A+ +F+E ++ D+ +WN++IS Y
Sbjct: 468 GVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETI--DVASWNALISGY 525
Query: 505 SKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPS 564
S HG Q + + MK + KP+ +TFLG+L+ C N+GL+D+G+E F+ M+ +G +P
Sbjct: 526 STHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPC 585
Query: 565 QEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLI 624
EH+ CMV LLGR+GQ+D+A K+IE +P ++ +LSA ++ A +A++++
Sbjct: 586 LEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEIL 645
Query: 625 NMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVAD 684
+ PK+ YVL+SN+YA A +W VA +R +++ G+KK PG SW+E G VH F V
Sbjct: 646 KINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGL 705
Query: 685 QSHP 688
HP
Sbjct: 706 SDHP 709
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 138/526 (26%), Positives = 231/526 (43%), Gaps = 23/526 (4%)
Query: 100 LSQFGEHEKTLFLYKEMVEKSMYPDEESCSF--VLRSCFSVSHE-QGKMVHAQIVKLG-- 154
+ Q G KT L E + S+ P +S ++ +LR C + K +H I+K G
Sbjct: 23 IRQCGFSVKTAALDLESSD-SIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSC 81
Query: 155 MDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTELAYWNNMISQAFESG-KMEECFQLFS 213
+D F N L+ Y K GF L E+ NN+ G ++ L+S
Sbjct: 82 LDLF--ATNILLNAYVKAGFDKDALNL----FDEMPERNNVSFVTLAQGYACQDPIGLYS 135
Query: 214 RMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLG 273
R+ +E + N + L+ V L +I LHS I+ V AL++ Y G
Sbjct: 136 RLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCG 195
Query: 274 SLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAIS 333
S+ AR +FE + D+VVW +VS Y NG ++SL+L+ CM +G P+ +T A+
Sbjct: 196 SVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALK 255
Query: 334 SITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVS 393
+ L ++ K +H +++ V L+ +Y+ ++ A ++F+ + VV
Sbjct: 256 ASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVP 315
Query: 394 WSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXX 453
WS MI + C EA+ LFI M+ + + +IL A LHG
Sbjct: 316 WSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVV 375
Query: 454 XXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQC 513
+L+ YAKC ++ A KLF E S K+ ++WN++I Y GE +
Sbjct: 376 KVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAE--LSSKNEVSWNTVIVGYENLGEGGKA 433
Query: 514 FELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVD 573
F ++ + + V +VTF L AC + +D G ++ + + ++ ++D
Sbjct: 434 FSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS-LID 492
Query: 574 LLGRAGQIDEASKI---IETVPLNSDARVYGPLLSACKMHSDPRLA 616
+ + G I A + +ET+ D + L+S H R A
Sbjct: 493 MYAKCGDIKFAQSVFNEMETI----DVASWNALISGYSTHGLGRQA 534
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 161/340 (47%), Gaps = 4/340 (1%)
Query: 65 LMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPD 124
L+ YT+ G + KVF D V +S ++ Q G + + L+ M E + P+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 125 EESCSFVLRSC-FSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLE 182
E + S +L C G+ +H +VK+G D V N+L+++Y K ++ A +
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 183 GMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKI 242
+S WN +I G+ + F +F + + +T + L + L + +
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467
Query: 243 GQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAG 302
G +H L I +N ++ V+ +L+ MY K G +K A+ +F +M D+ WN ++S Y+
Sbjct: 468 GVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYST 527
Query: 303 NGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRN-GSDYQVS 361
+G +++L ++ M +P+ T + +S + + G++ +IR+ G + +
Sbjct: 528 HGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLE 587
Query: 362 VHNALIDMYSACNGLNSARRIFDLIT-DKTVVSWSAMIKA 400
+ ++ + L+ A ++ + I + +V+ W AM+ A
Sbjct: 588 HYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 131/296 (44%), Gaps = 10/296 (3%)
Query: 11 LNIRKIPYIVAPFQTRFFTTSSLLDLCT--KPQHL-QQIHARFFLHGLHQNSSLSSKLMD 67
L IR V P + FT SS+L+ C K L +Q+H G + +S+ L+D
Sbjct: 335 LFIRMREAFVVPNE---FTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALID 391
Query: 68 CYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEES 127
Y K + K+F + + V ++ ++ GE K +++E + + E +
Sbjct: 392 VYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVT 451
Query: 128 CSFVLRSCFSV-SHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMS 185
S L +C S+ S + G VH +K V NSL+++Y K G + A M
Sbjct: 452 FSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME 511
Query: 186 VTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQ- 244
++A WN +IS G + ++ M+ + +PN +T + +L + L+ GQ
Sbjct: 512 TIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQE 571
Query: 245 ALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMP-RNDLVVWNIMVSA 299
S+I + L T ++ + + G L A + E +P +++W M+SA
Sbjct: 572 CFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 189/599 (31%), Positives = 323/599 (53%), Gaps = 12/599 (2%)
Query: 84 FTENPDSVI--YSAILRNLSQFGEHEKTLFLYKEMVEKSM--YPDEESCSFVLRSCFSV- 138
F E P S + Y+ ++R + G + + ++ MV + + PD + FV ++ +
Sbjct: 72 FEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELK 131
Query: 139 SHEQGKMVHAQIVK--LGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNM 195
S + G +VH +I++ G D + V+N+L+ +Y G + A + + M ++ WN M
Sbjct: 132 SMKLGLVVHGRILRSWFGRDKY--VQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTM 189
Query: 196 ISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNL 255
IS + +G M + +F M E++ + T++++L L L++G+ +H L+ L
Sbjct: 190 ISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRL 249
Query: 256 CGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYC 315
++ V AL++MY+K G + +AR +F++M R D++ W M++ Y +G + +LEL
Sbjct: 250 GDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRL 309
Query: 316 MVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNG 375
M GVRP+ T +S GK +H +R + + +LI MY+ C
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR 369
Query: 376 LNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPT 435
++ R+F + WSA+I ++ +AL LF M+ + + ++LP
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429
Query: 436 FAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHK--D 493
+A + L +H Y T L+ Y+KCG +E A K+F+ + HK D
Sbjct: 430 YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKD 489
Query: 494 IIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFK 553
++ W ++IS Y HG+ +++ +M S V P+++TF L AC +SGLV++G +F+
Sbjct: 490 VVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFR 549
Query: 554 EMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDP 613
M++ Y H+ C+VDLLGRAG++DEA +I T+P + V+G LL+AC H +
Sbjct: 550 FMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENV 609
Query: 614 RLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLE 672
+L E+AA KL +EP+N GNYVLL+NIYAA G+W + K+RS + + GL+K PG S +E
Sbjct: 610 QLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIE 668
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 151/308 (49%), Gaps = 5/308 (1%)
Query: 244 QALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGN 303
+ALH +I ++T L Y G + AR +FE+MP++ L+ +NI++ Y
Sbjct: 35 KALHCHVITGGRVSGHILST-LSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVRE 93
Query: 304 GCPKESLELVYCMVRSGVR--PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVS 361
G +++ + MV GV+ PD +T + +LK + G +H ++R+
Sbjct: 94 GLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKY 153
Query: 362 VHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCG 421
V NAL+ MY + AR +FD++ ++ V+SW+ MI + + +AL +F M
Sbjct: 154 VQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNES 213
Query: 422 TRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMAR 481
+D ++++LP + L R +H + +L+ Y KCG ++ AR
Sbjct: 214 VDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEAR 273
Query: 482 KLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVN 541
+FD + +D+I W MI+ Y++ G+ EL M+ V+P+ VT L++ C +
Sbjct: 274 FVFD--RMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGD 331
Query: 542 SGLVDKGK 549
+ V+ GK
Sbjct: 332 ALKVNDGK 339
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 125/561 (22%), Positives = 233/561 (41%), Gaps = 54/561 (9%)
Query: 46 IHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGE 105
+H R ++ + + L+ Y FG +++ VF +N D + ++ ++ + G
Sbjct: 139 VHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGY 198
Query: 106 HEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDLVRNS 164
L ++ MV +S+ D + +L C + E G+ VH + + + V+N+
Sbjct: 199 MNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNA 258
Query: 165 LVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPN 223
LV +Y K G ++ A + M ++ W MI+ E G +E +L M+ E ++PN
Sbjct: 259 LVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPN 318
Query: 224 SITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFE 283
++T+ +L+ D + G+ LH + + ++ + T+L+SMY K + +F
Sbjct: 319 AVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFS 378
Query: 284 KMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFT---AIPAISSITQLKH 340
+ W+ +++ N ++L L M R V P++ T +PA +++ L+
Sbjct: 379 GASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQ 438
Query: 341 TEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITD----KTVVSWSA 396
+H ++ + G + L+ +YS C L SA +IF+ I + K VV W A
Sbjct: 439 ---AMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGA 495
Query: 397 MIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXX 456
+I + +H AL +F+EM G + I TF
Sbjct: 496 LISGYGMHGDGHNALQVFMEMVRSGVTPNEI-------TF-------------------- 528
Query: 457 XXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFEL 516
TS L + + G +E LF +K + N G + E
Sbjct: 529 --------TSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEA 580
Query: 517 YNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHH----ACMV 572
YN + +P + LL ACV V G+ ++ +L +P + A +
Sbjct: 581 YNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFEL---EPENTGNYVLLANIY 637
Query: 573 DLLGRAGQIDEASKIIETVPL 593
LGR +++ ++E V L
Sbjct: 638 AALGRWKDMEKVRSMMENVGL 658
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 188/614 (30%), Positives = 331/614 (53%), Gaps = 12/614 (1%)
Query: 93 YSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQI- 150
++ +L++LS+ + E+ L+ + M PD + L++C + G+M+H +
Sbjct: 28 WNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVK 87
Query: 151 --VKLGMDAFDLVRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFESGKMEE 207
V LG D + V +SL+ +Y K G + A + + ++ W++M+S ++G +
Sbjct: 88 KDVTLGSDLY--VGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQ 145
Query: 208 CFQLFSRM-RKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALL 266
+ F RM ++ P+ +T+I L+ + L ++G+ +H +I +L++ +LL
Sbjct: 146 AVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLL 205
Query: 267 SMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMF 326
+ Y K + K+A +F+ + D++ W+ +++ Y NG E+L + M+ G P++
Sbjct: 206 NCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVA 265
Query: 327 TAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLI 386
T + + + E G++ H IR G + +V V AL+DMY C A +F I
Sbjct: 266 TVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRI 325
Query: 387 TDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKL-CGTRVDFIIVINILPTFAKIGALHYV 445
K VVSW A+I ++ ++ F M L TR D I+++ +L + +++G L
Sbjct: 326 PRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQA 385
Query: 446 RYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYS 505
+ H Y SL+ Y++CG + A K+F+ + KD + W S+I+ Y
Sbjct: 386 KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFN--GIALKDTVVWTSLITGYG 443
Query: 506 KHGEWFQCFELYNQM-KLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPS 564
HG+ + E +N M K S VKP++VTFL +L+AC ++GL+ +G IFK MV+ Y P+
Sbjct: 444 IHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPN 503
Query: 565 QEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLI 624
EH+A +VDLLGR G +D A +I + +P + ++ G LL AC++H + +AE A+KL
Sbjct: 504 LEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLF 563
Query: 625 NMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVAD 684
+E +AG Y+L+SN+Y G+W+ V K+R+ ++ RG+KK S +E +VH F D
Sbjct: 564 ELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADD 623
Query: 685 QSHPRSVDIYSILK 698
+ HP +Y +LK
Sbjct: 624 ELHPEKEPVYGLLK 637
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 214/428 (50%), Gaps = 15/428 (3%)
Query: 28 FTTSSLLDLCTKPQHLQQIHARFFLHG-------LHQNSSLSSKLMDCYTKFGLPGLSQK 80
FT L C + L++++ +HG L + + S L+ Y K G + +
Sbjct: 61 FTLPVALKACGE---LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALR 117
Query: 81 VFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKS-MYPDEESCSFVLRSCFSVS 139
+F E PD V +S+++ + G + + ++ MV S + PD + ++ +C +S
Sbjct: 118 MFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLS 177
Query: 140 HEQ-GKMVHAQIVKLGMDAFDLVRNSLVELYEKN-GFLNAHEPLEGMSVTELAYWNNMIS 197
+ + G+ VH +++ G + NSL+ Y K+ F A + ++ ++ W+ +I+
Sbjct: 178 NSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIA 237
Query: 198 QAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCG 257
++G E +F+ M + +PN TV+ +L++ H L+ G+ H L I L
Sbjct: 238 CYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLET 297
Query: 258 ELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCM- 316
E+ V+TAL+ MY+K S ++A +F ++PR D+V W ++S + NG S+E M
Sbjct: 298 EVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIML 357
Query: 317 VRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGL 376
+ + RPD + + S ++L E K H++VI+ G D + +L+++YS C L
Sbjct: 358 LENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSL 417
Query: 377 NSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEM-KLCGTRVDFIIVINILPT 435
+A ++F+ I K V W+++I + +H + +AL F M K + + + ++IL
Sbjct: 418 GNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSA 477
Query: 436 FAKIGALH 443
+ G +H
Sbjct: 478 CSHAGLIH 485
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 150/326 (46%), Gaps = 9/326 (2%)
Query: 271 KLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIP 330
K S DAR MF +M + L WN ++ + + +E L M R +PD FT
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 331 AISSITQLKHTEWGKQMHAHVIRN---GSDYQVSVHNALIDMYSACNGLNSARRIFDLIT 387
A+ + +L+ +G+ +H V ++ GSD V ++LI MY C + A R+FD +
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVG--SSLIYMYIKCGRMIEALRMFDELE 123
Query: 388 DKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRV-DFIIVINILPTFAKIGALHYVR 446
+V+WS+M+ + +A+ F M + D + +I ++ K+ R
Sbjct: 124 KPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGR 183
Query: 447 YLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSK 506
+HG+ SLL YAK + A LF + KD+I+W+++I+ Y +
Sbjct: 184 CVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFK--MIAEKDVISWSTVIACYVQ 241
Query: 507 HGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQE 566
+G + ++N M +P+ T L +L AC + +++G++ E+ G + +
Sbjct: 242 NGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKT-HELAIRKGLETEVK 300
Query: 567 HHACMVDLLGRAGQIDEASKIIETVP 592
+VD+ + +EA + +P
Sbjct: 301 VSTALVDMYMKCFSPEEAYAVFSRIP 326
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 171/371 (46%), Gaps = 26/371 (7%)
Query: 29 TTSSLLDLCTKPQHLQQ---IHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFT 85
T +L+ CTK + + +H G + SL + L++CY K + +F
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 224
Query: 86 ENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH--EQG 143
D + +S ++ Q G + L ++ +M++ P+ + VL++C + +H EQG
Sbjct: 225 AEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQAC-AAAHDLEQG 283
Query: 144 KMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSV------TELAYWNNMIS 197
+ H ++ G++ V +LV++Y K P E +V ++ W +IS
Sbjct: 284 RKTHELAIRKGLETEVKVSTALVDMYMK-----CFSPEEAYAVFSRIPRKDVVSWVALIS 338
Query: 198 QAFESGKMEECFQLFSRMRKE-NIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLC 256
+G + FS M E N +P++I ++ +L S +L L+ + HS +I
Sbjct: 339 GFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFD 398
Query: 257 GELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCM 316
+ +L+ +Y + GSL +A +F + D VVW +++ Y +G ++LE M
Sbjct: 399 SNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHM 458
Query: 317 VRSG-VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSV----HNALIDMYS 371
V+S V+P+ T + +S+ + G ++ ++ +DY+++ + L+D+
Sbjct: 459 VKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMV---NDYRLAPNLEHYAVLVDLLG 515
Query: 372 ACNGLNSARRI 382
L++A I
Sbjct: 516 RVGDLDTAIEI 526
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 332 bits (850), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 196/645 (30%), Positives = 339/645 (52%), Gaps = 9/645 (1%)
Query: 56 HQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKE 115
H+N+ ++ ++ + K G ++ +F + V ++ ++ ++ ++ L+++
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135
Query: 116 MVEKS--MYPDEESCSFVLRSCF-SVSHEQGKMVHAQIVKLGMDA--FDLVRNSLVELYE 170
M S PD + + +L C +V VHA VKLG D F V N L++ Y
Sbjct: 136 MCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYC 195
Query: 171 KNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVIN 229
+ L+ A E + + +N +I+ + G E LF +MR+ QP+ T
Sbjct: 196 EVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSG 255
Query: 230 LLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRND 289
+L++ V LH +GQ LH+L + + + +V +L Y K + + R++F++MP D
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315
Query: 290 LVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHA 349
V +N+++S+Y+ + SL M G F +S L + G+Q+H
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375
Query: 350 HVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLE 409
+ +D + V N+L+DMY+ C A IF + +T VSW+A+I +
Sbjct: 376 QALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGA 435
Query: 410 ALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLA 469
L LF +M+ R D +L A +L + LH + + L+
Sbjct: 436 GLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVD 495
Query: 470 SYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQ 529
YAKCG I+ A ++F+E ++ ++WN++ISA++ +G+ + +M S ++PD
Sbjct: 496 MYAKCGSIKDAVQVFEE--MPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDS 553
Query: 530 VTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIE 589
V+ LG+LTAC + G V++G E F+ M +YG P ++H+ACM+DLLGR G+ EA K+++
Sbjct: 554 VSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMD 613
Query: 590 TVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEP-KNAGNYVLLSNIYAAAGKWD 648
+P D ++ +L+AC++H + LAE AA+KL +ME ++A YV +SNIYAAAG+W+
Sbjct: 614 EMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWE 673
Query: 649 KVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDI 693
KV ++ +R+RG+KK P SW+E N ++H F DQ+HP +I
Sbjct: 674 KVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEI 718
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 177/367 (48%), Gaps = 8/367 (2%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQF 103
QQ+HA G +++S+ ++++D Y+K ++ +F D V Y+ ++ + SQ
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 104 GEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSV---SHEQGKMVHAQIVKLGMDAFDL 160
++E +L ++EM + M D + F + S + G+ +H Q + D+
Sbjct: 330 DQYEASLHFFREM--QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 387
Query: 161 VRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKEN 219
V NSLV++Y K F A + + W +IS + G +LF++MR N
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 220 IQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDAR 279
++ + T +L+++ L +G+ LH+ II S + + L+ MY K GS+KDA
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 280 LMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLK 339
+FE+MP + V WN ++SA+A NG + ++ M+ SG++PD + + +++ +
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
Query: 340 HTEWGKQ-MHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLIT-DKTVVSWSAM 397
E G + A G + + ++D+ A ++ D + + + WS++
Sbjct: 568 FVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 627
Query: 398 IKAHAVH 404
+ A +H
Sbjct: 628 LNACRIH 634
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 133/284 (46%), Gaps = 7/284 (2%)
Query: 23 FQTRFFTTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQ 79
F R F +++L + LQ Q+H + L + + L+D Y K + ++
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAE 406
Query: 80 KVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFS-V 138
+F +V ++A++ Q G H L L+ +M ++ D+ + + VL++ S
Sbjct: 407 LIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFA 466
Query: 139 SHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMIS 197
S GK +HA I++ G + LV++Y K G + +A + E M WN +IS
Sbjct: 467 SLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALIS 526
Query: 198 QAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIG-QALHSLIIVSNLC 256
++G E F++M + +QP+S++++ +L + ++ G + ++ + +
Sbjct: 527 AHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGIT 586
Query: 257 GELTVNTALLSMYVKLGSLKDARLMFEKMP-RNDLVVWNIMVSA 299
+ +L + + G +A + ++MP D ++W+ +++A
Sbjct: 587 PKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 328 bits (841), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 201/672 (29%), Positives = 334/672 (49%), Gaps = 100/672 (14%)
Query: 126 ESCSFVLRSCFSVSHEQ--GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGF-LNAHEPLE 182
E C+ +L+ + S+ + ++VH +++K G+ + N+L+ +Y K G+ L+A + +
Sbjct: 14 ELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFD 73
Query: 183 GMSVTELAYWNNMISQAFESGKMEECFQLFSR---------------------------- 214
M + WN ++S + G M+ + F +
Sbjct: 74 EMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRV 133
Query: 215 ---MRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVK 271
M KE I+P T+ N+L S ++ G+ +HS I+ L G ++V+ +LL+MY K
Sbjct: 134 MGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK 193
Query: 272 -------------------------------LGSLKDARLMFEKMPRNDLVVWNIMVSAY 300
+G + A FE+M D+V WN M+S +
Sbjct: 194 CGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGF 253
Query: 301 AGNGCPKESLELVYCMVR-SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQ 359
G +L++ M+R S + PD FT +S+ L+ GKQ+H+H++ G D
Sbjct: 254 NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDIS 313
Query: 360 VSVHNALIDMYSACNGLNSARR---------------------------------IFDLI 386
V NALI MYS C G+ +ARR IF +
Sbjct: 314 GIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSL 373
Query: 387 TDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVR 446
D+ VV+W+AMI + H EA++LF M G R + + +L + + +L + +
Sbjct: 374 KDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGK 433
Query: 447 YLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSK 506
+HG +L+ YAK G I A + FD + +D ++W SMI A ++
Sbjct: 434 QIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRC-ERDTVSWTSMIIALAQ 492
Query: 507 HGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQE 566
HG + EL+ M + ++PD +T++G+ +AC ++GLV++G++ F M D+ P+
Sbjct: 493 HGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLS 552
Query: 567 HHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINM 626
H+ACMVDL GRAG + EA + IE +P+ D +G LLSAC++H + L +VAA++L+ +
Sbjct: 553 HYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLL 612
Query: 627 EPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQS 686
EP+N+G Y L+N+Y+A GKW++ AK+R ++D +KK G SW+E +VH F V D +
Sbjct: 613 EPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGT 672
Query: 687 HPRSVDIYSILK 698
HP +IY +K
Sbjct: 673 HPEKNEIYMTMK 684
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 178/597 (29%), Positives = 325/597 (54%), Gaps = 40/597 (6%)
Query: 138 VSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN---AHEPLEGMSVTELAYWNN 194
VS Q K H +++ G + + L + + F + A + + + WN
Sbjct: 41 VSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNT 100
Query: 195 MISQAFESGK--MEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIV 252
+I +A+ SG + + + + PN T L+++ ++ L +GQ+LH + +
Sbjct: 101 LI-RAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVK 159
Query: 253 SNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLEL 312
S + ++ V +L+ Y G L A +F + D+V WN M++ + G P ++LEL
Sbjct: 160 SAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALEL 219
Query: 313 VYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSA 372
M V+ T + +S+ ++++ E+G+Q+ +++ N + +++ NA++DMY+
Sbjct: 220 FKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTK 279
Query: 373 CNGLNSARRIFDLITDKT-------------------------------VVSWSAMIKAH 401
C + A+R+FD + +K +V+W+A+I A+
Sbjct: 280 CGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAY 339
Query: 402 AVHDQCLEALSLFIEMKLC-GTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXX 460
+ + EAL +F E++L +++ I +++ L A++GAL R++H Y
Sbjct: 340 EQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMN 399
Query: 461 XXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQM 520
++L+ Y+KCG +E +R++F+ + +D+ W++MI + HG + +++ +M
Sbjct: 400 FHVTSALIHMYSKCGDLEKSREVFNSVEK--RDVFVWSAMIGGLAMHGCGNEAVDMFYKM 457
Query: 521 KLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQ 580
+ +NVKP+ VTF + AC ++GLVD+ + +F +M YG P ++H+AC+VD+LGR+G
Sbjct: 458 QEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGY 517
Query: 581 IDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNI 640
+++A K IE +P+ V+G LL ACK+H++ LAE+A +L+ +EP+N G +VLLSNI
Sbjct: 518 LEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNI 577
Query: 641 YAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
YA GKW+ V+++R +R GLKK PGCS +E +G +HEF D +HP S +Y L
Sbjct: 578 YAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKL 634
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 219/446 (49%), Gaps = 37/446 (8%)
Query: 32 SLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKL--MDCYTKFGLPGLSQKVFYFTENPD 89
SL++ C + L+Q H G + +SKL M + F ++KVF P+
Sbjct: 35 SLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPN 94
Query: 90 SVIYSAILRNLSQFGEHEKTLFLYKEMVEKSM-YPDEESCSFVLRSCFSVSH-EQGKMVH 147
S ++ ++R + + +++ + +MV +S YP++ + F++++ VS G+ +H
Sbjct: 95 SFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLH 154
Query: 148 AQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKME 206
VK + + V NSL+ Y G L+ A + + ++ WN+MI+ + G +
Sbjct: 155 GMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPD 214
Query: 207 ECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALL 266
+ +LF +M E+++ + +T++ +L + + L+ G+ + S I + + LT+ A+L
Sbjct: 215 KALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAML 274
Query: 267 SMYVKLGSLKDARLMFE-------------------------------KMPRNDLVVWNI 295
MY K GS++DA+ +F+ MP+ D+V WN
Sbjct: 275 DMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNA 334
Query: 296 MVSAYAGNGCPKESLELVYCM-VRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRN 354
++SAY NG P E+L + + + ++ ++ + T + +S+ Q+ E G+ +H+++ ++
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH 394
Query: 355 GSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLF 414
G V +ALI MYS C L +R +F+ + + V WSAMI A+H EA+ +F
Sbjct: 395 GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMF 454
Query: 415 IEMKLCGTRVDFIIVINILPTFAKIG 440
+M+ + + + N+ + G
Sbjct: 455 YKMQEANVKPNGVTFTNVFCACSHTG 480
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 202/624 (32%), Positives = 336/624 (53%), Gaps = 15/624 (2%)
Query: 87 NPDSVIYSAILRN--LSQF---GEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSV-SH 140
N S + I RN LS++ G++ L + +MVE + D+ + +L + V S
Sbjct: 272 NDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSL 331
Query: 141 EQGKMVHAQIVKLGMDAFDLVRNSLVELY---EKNGFLNAHEPLEGMSVTELAYWNNMIS 197
G+ VH +KLG+D V NSL+ +Y K GF A + MS +L WN++I+
Sbjct: 332 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGF--ARTVFDNMSERDLISWNSVIA 389
Query: 198 QAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDL-HLLKIGQALHSLIIVSNLC 256
++G E LF ++ + ++P+ T+ ++L++ L L + + +H I N
Sbjct: 390 GIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNV 449
Query: 257 GELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCM 316
+ V+TAL+ Y + +K+A ++FE+ DLV WN M++ Y + ++L+L M
Sbjct: 450 SDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALM 508
Query: 317 VRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGL 376
+ G R D FT + L GKQ+HA+ I++G D + V + ++DMY C +
Sbjct: 509 HKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDM 568
Query: 377 NSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTF 436
++A+ FD I V+W+ MI + + A +F +M+L G D + +
Sbjct: 569 SAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKAS 628
Query: 437 AKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIA 496
+ + AL R +H TSL+ YAKCG I+ A LF + +I A
Sbjct: 629 SCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFK--RIEMMNITA 686
Query: 497 WNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMV 556
WN+M+ ++HGE + +L+ QMK +KPD+VTF+G+L+AC +SGLV + + + M
Sbjct: 687 WNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMH 746
Query: 557 DLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLA 616
YG +P EH++C+ D LGRAG + +A +IE++ + + A +Y LL+AC++ D
Sbjct: 747 GDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETG 806
Query: 617 EVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQ 676
+ A KL+ +EP ++ YVLLSN+YAAA KWD++ R+ ++ +KK PG SW+E +
Sbjct: 807 KRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNK 866
Query: 677 VHEFRVADQSHPRSVDIYSILKVM 700
+H F V D+S+ ++ IY +K M
Sbjct: 867 IHIFVVDDRSNRQTELIYRKVKDM 890
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 199/413 (48%), Gaps = 6/413 (1%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQF 103
QQ+H GL ++S+ L++ Y K G ++ VF D + +++++ ++Q
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQN 394
Query: 104 GEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH--EQGKMVHAQIVKLGMDAFDLV 161
G + + L+ +++ + PD+ + + VL++ S+ K VH +K+ + V
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFV 454
Query: 162 RNSLVELYEKNGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQ 221
+L++ Y +N + E L +L WN M++ +S + +LF+ M K+ +
Sbjct: 455 STALIDAYSRNRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 514
Query: 222 PNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLM 281
+ T+ + ++ L + G+ +H+ I S +L V++ +L MYVK G + A+
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 574
Query: 282 FEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHT 341
F+ +P D V W M+S NG + + + M GV PD FT + + L
Sbjct: 575 FDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 634
Query: 342 EWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAH 401
E G+Q+HA+ ++ V +L+DMY+ C ++ A +F I + +W+AM+
Sbjct: 635 EQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGL 694
Query: 402 AVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIG----ALHYVRYLHG 450
A H + E L LF +MK G + D + I +L + G A ++R +HG
Sbjct: 695 AQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHG 747
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 125/569 (21%), Positives = 250/569 (43%), Gaps = 45/569 (7%)
Query: 47 HARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEH 106
HAR + L + L+ Y+K G +++VF + D V +++IL +Q E
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 107 -----EKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHE-QGKMVHAQIVKLGMDAFDL 160
++ L++ + + +Y + S +L+ C + + H K+G+D +
Sbjct: 122 VVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEF 181
Query: 161 VRNSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKEN 219
V +LV +Y K G + + L E M ++ WN M+ E G EE L S
Sbjct: 182 VAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSG 241
Query: 220 IQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDAR 279
+ PN IT+ L R + D + G++ + DA
Sbjct: 242 LNPNEITLRLLARISGD----------------DSDAGQVK----------SFANGNDAS 275
Query: 280 LMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLK 339
+ E + RN +S Y +G L+ MV S V D T I +++ ++
Sbjct: 276 SVSEIIFRNK------GLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVD 329
Query: 340 HTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIK 399
G+Q+H ++ G D ++V N+LI+MY AR +FD ++++ ++SW+++I
Sbjct: 330 SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIA 389
Query: 400 AHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKI-GALHYVRYLHGYXXXXXXX 458
A + +EA+ LF+++ CG + D + ++L + + L + +H +
Sbjct: 390 GIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNV 449
Query: 459 XXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYN 518
T+L+ +Y++ C++ A LF+ + D++AWN+M++ Y++ + + +L+
Sbjct: 450 SDSFVSTALIDAYSRNRCMKEAEILFER---HNFDLVAWNAMMAGYTQSHDGHKTLKLFA 506
Query: 519 QMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRA 578
M + D T + C +++GK++ + GY + ++D+ +
Sbjct: 507 LMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIK-SGYDLDLWVSSGILDMYVKC 565
Query: 579 GQIDEASKIIETVPLNSDARVYGPLLSAC 607
G + A +++P+ D + ++S C
Sbjct: 566 GDMSAAQFAFDSIPVPDDV-AWTTMISGC 593
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 184/409 (44%), Gaps = 54/409 (13%)
Query: 143 GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFE 201
GK HA+I+ + + N+L+ +Y K G L A + M +L WN++++ +
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 202 SGK-----MEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLC 256
S + +++ F LF +R++ + + +T+ +L+ + + ++ H L
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177
Query: 257 GELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCM 316
G+ V AL+++Y+K G +K+ +++FE+MP D+V+WN+M+ AY G +E+++L
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 237
Query: 317 VRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGL 376
SG+ P+ T ++ A + + SD + S NG
Sbjct: 238 HSSGLNPNEITL-----------------RLLARISGDDSDAG--------QVKSFANG- 271
Query: 377 NSARRIFDLITDKTVVS-------WSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIV 429
N A + ++I +S +SA++K F +M D +
Sbjct: 272 NDASSVSEIIFRNKGLSEYLHSGQYSALLKC-------------FADMVESDVECDQVTF 318
Query: 430 INILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKS 489
I +L T K+ +L + +H SL+ Y K AR +FD
Sbjct: 319 ILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFD--NM 376
Query: 490 SHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTA 538
S +D+I+WNS+I+ +++G + L+ Q+ +KPDQ T +L A
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 140/328 (42%), Gaps = 39/328 (11%)
Query: 229 NLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRN 288
LR+ + L +G+ H+ I+ E + L+SMY K GSL AR +F+KMP
Sbjct: 44 GFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDR 103
Query: 289 DLVVWNIMVSAYAGNG-CPKESLELVYCMVRSGVRPDMFTAIPAISSITQL---KHTEWG 344
DLV WN +++AYA + C E+++ + + R + ++T+ +S + +L W
Sbjct: 104 DLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWA 163
Query: 345 KQ-MHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAV 403
+ H + + G D V AL+++Y + + +F+ + + VV W+ M+KA+
Sbjct: 164 SESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 404 HDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXX 463
EA+ L G + I L A+I
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEI----TLRLLARISG-------------------DDS 260
Query: 464 ETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLS 523
+ + S+A SS +II N +S Y G++ + + M S
Sbjct: 261 DAGQVKSFAN-----------GNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVES 309
Query: 524 NVKPDQVTFLGLLTACVNSGLVDKGKEI 551
+V+ DQVTF+ +L V + G+++
Sbjct: 310 DVECDQVTFILMLATAVKVDSLALGQQV 337
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 207/678 (30%), Positives = 356/678 (52%), Gaps = 11/678 (1%)
Query: 28 FTTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
FT SLL C Q L IH + ++G + +SS L++ Y KFGL ++KVF
Sbjct: 47 FTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEE 106
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGK 144
D V ++A++ S+ G + L EM + + P + +L ++ Q
Sbjct: 107 MRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQ-- 164
Query: 145 MVHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESG 203
+H V G D V NS++ LY K + +A + + M ++ WN MIS G
Sbjct: 165 CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVG 224
Query: 204 KMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNT 263
M E +L RMR + ++P+ T L + + L++G+ LH I+ + ++ + T
Sbjct: 225 NMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKT 284
Query: 264 ALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRP 323
AL++MY+K G + + + E +P D+V W +M+S G +++L + M++SG
Sbjct: 285 ALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDL 344
Query: 324 DMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIF 383
++S QL + G +H +V+R+G N+LI MY+ C L+ + IF
Sbjct: 345 SSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIF 404
Query: 384 DLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTR-VDFIIVINILPTFAKIGAL 442
+ + ++ +VSW+A+I +A + +AL LF EMK + VD V+++L + GAL
Sbjct: 405 ERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGAL 464
Query: 443 HYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMIS 502
+ +H +T+L+ Y+KCG +E A++ FD S KD+++W +I+
Sbjct: 465 PVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDS--ISWKDVVSWGILIA 522
Query: 503 AYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQ 562
Y HG+ E+Y++ S ++P+ V FL +L++C ++G+V +G +IF MV +G +
Sbjct: 523 GYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVE 582
Query: 563 PSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQK 622
P+ EH AC+VDLL RA +I++A K + V G +L AC+ + + ++ +
Sbjct: 583 PNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICED 642
Query: 623 LINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRV 682
+I ++P +AG+YV L + +AA +WD V++ + +R GLKK PG S +E NG+ F +
Sbjct: 643 MIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFM 702
Query: 683 ADQSHPRSVDIYSILKVM 700
SH S D S+LK++
Sbjct: 703 NHTSH--SDDTVSLLKLL 718
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 149/576 (25%), Positives = 290/576 (50%), Gaps = 12/576 (2%)
Query: 93 YSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQIV 151
+++ + +LS G+H++ L + M+ + PD + +L++C S+ G +H Q++
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 152 KLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQ 210
G + + +SLV LY K G L +A + E M ++ +W MI +G + E
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 211 LFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYV 270
L + MR + I+P +T++ +L +++ L Q LH ++ ++ V ++L++Y
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYC 190
Query: 271 KLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIP 330
K + DA+ +F++M + D+V WN M+S YA G E L+L+Y M G+RPD T
Sbjct: 191 KCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGA 250
Query: 331 AISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKT 390
++S + E G+ +H +++ G D + + ALI MY C ++ R+ + I +K
Sbjct: 251 SLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKD 310
Query: 391 VVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHG 450
VV W+ MI + +AL +F EM G+ + + +++ + A++G+ +HG
Sbjct: 311 VVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHG 370
Query: 451 YXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEW 510
Y SL+ YAKCG ++ + +F+ + + +D+++WN++IS Y+++ +
Sbjct: 371 YVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFE--RMNERDLVSWNAIISGYAQNVDL 428
Query: 511 FQCFELYNQMKLSNVKP-DQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHA 569
+ L+ +MK V+ D T + LL AC ++G + GK I ++ + +P
Sbjct: 429 CKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDT 487
Query: 570 CMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLA-EVAAQKL-INME 627
+VD+ + G ++ A + +++ D +G L++ H +A E+ ++ L ME
Sbjct: 488 ALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGFHGKGDIALEIYSEFLHSGME 546
Query: 628 PKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLK 663
P + +LS+ + S +RD G++
Sbjct: 547 PNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVE 582
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 111/496 (22%), Positives = 219/496 (44%), Gaps = 20/496 (4%)
Query: 191 YWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLI 250
Y+N+ I+ G ++ FS M + P++ T +LL++ L L G ++H +
Sbjct: 13 YFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQV 72
Query: 251 IVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESL 310
+V+ + ++++L+++Y K G L AR +FE+M D+V W M+ Y+ G E+
Sbjct: 73 LVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 311 ELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMY 370
LV M G++P T + +S + ++ + +H + G D ++V N+++++Y
Sbjct: 133 SLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNLY 189
Query: 371 SACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVI 430
C+ + A+ +FD + + +VSW+ MI +A E L L M+ G R D
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFG 249
Query: 431 NILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSS 490
L + L R LH +T+L+ Y KCG E + ++ +
Sbjct: 250 ASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLE--TIP 307
Query: 491 HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKE 550
+KD++ W MIS + G + ++++M S ++ +C G D G
Sbjct: 308 NKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGAS 367
Query: 551 IFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMH 610
+ ++ +GY ++ + + G +D++ I E + D + ++S +
Sbjct: 368 VHGYVLR-HGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISGYAQN 425
Query: 611 SDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAA-------GKWDKVAKMRSFLRDRGLK 663
D A + +++ + ++ ++S + A + GK +RSF+R L
Sbjct: 426 VDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLV 485
Query: 664 KTP------GCSWLES 673
T C +LE+
Sbjct: 486 DTALVDMYSKCGYLEA 501
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 154/319 (48%), Gaps = 7/319 (2%)
Query: 288 NDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQM 347
N +N ++ + +G K+ L M+ + + PD FT + + L+ +G +
Sbjct: 9 NSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSI 68
Query: 348 HAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQC 407
H V+ NG + ++L+++Y+ L AR++F+ + ++ VV W+AMI ++
Sbjct: 69 HQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIV 128
Query: 408 LEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSL 467
EA SL EM+ G + + ++ +L +I L + LH + S+
Sbjct: 129 GEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSM 185
Query: 468 LASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKP 527
L Y KC + A+ LFD+ + +D+++WN+MIS Y+ G + +L +M+ ++P
Sbjct: 186 LNLYCKCDHVGDAKDLFDQME--QRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRP 243
Query: 528 DQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKI 587
DQ TF L+ ++ G+ + ++V G+ ++ + + G+ + + ++
Sbjct: 244 DQQTFGASLSVSGTMCDLEMGRMLHCQIVKT-GFDVDMHLKTALITMYLKCGKEEASYRV 302
Query: 588 IETVPLNSDARVYGPLLSA 606
+ET+P N D + ++S
Sbjct: 303 LETIP-NKDVVCWTVMISG 320
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 199/684 (29%), Positives = 353/684 (51%), Gaps = 19/684 (2%)
Query: 29 TTSSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFT 85
T SSLL C + + + +HAR + +S L + L+ Y+K G ++ VF
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 86 E---NPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ 142
D V +SA++ G + ++ E +E + P++ + V+R+C +
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 143 -GKMVHAQIVKLGMDAFDL-VRNSLVELYEK--NGFLNAHEPLEGMSVTELAYWNNMISQ 198
G++ ++K G D+ V SL++++ K N F NA++ + MS + W MI++
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 199 AFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGE 258
+ G E + F M + + T+ ++ + +L L +G+ LHS I S L +
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD 303
Query: 259 LTVNTALLSMYVKL---GSLKDARLMFEKMPRNDLVVWNIMVSAYAGN-GCPKESLELVY 314
V +L+ MY K GS+ D R +F++M + ++ W +++ Y N E++ L
Sbjct: 304 --VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFS 361
Query: 315 CMVRSG-VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSAC 373
M+ G V P+ FT A + L GKQ+ + G SV N++I M+
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS 421
Query: 374 NGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINIL 433
+ + A+R F+ +++K +VS++ + + +A L E+ V ++L
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481
Query: 434 PTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKD 493
A +G++ +H +L++ Y+KCG I+ A ++F+ + +++
Sbjct: 482 SGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME--NRN 539
Query: 494 IIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFK 553
+I+W SMI+ ++KHG + E +NQM VKP++VT++ +L+AC + GLV +G F
Sbjct: 540 VISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFN 599
Query: 554 EMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDP 613
M + + +P EH+ACMVDLL RAG + +A + I T+P +D V+ L AC++HS+
Sbjct: 600 SMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNT 659
Query: 614 RLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLES 673
L ++AA+K++ ++P Y+ LSNIYA AGKW++ +MR +++R L K GCSW+E
Sbjct: 660 ELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEV 719
Query: 674 NGQVHEFRVADQSHPRSVDIYSIL 697
++H+F V D +HP + IY L
Sbjct: 720 GDKIHKFYVGDTAHPNAHQIYDEL 743
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 193/410 (47%), Gaps = 16/410 (3%)
Query: 193 NNMISQAFESGKMEECFQLFSRMRKENIQP-NSITVINLLRSTVDLHLLKIGQALHSLII 251
+ +I + +G + M ++ I+P +S+T +LL+S + ++G+ +H+ +I
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89
Query: 252 VSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPR---NDLVVWNIMVSAYAGNGCPKE 308
++ + + +L+S+Y K G A +FE M R D+V W+ M++ Y NG +
Sbjct: 90 EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 309 SLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGS-DYQVSVHNALI 367
++++ + G+ P+ + I + + G+ +++ G + V V +LI
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 368 DMY-SACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDF 426
DM+ N +A ++FD +++ VV+W+ MI EA+ F++M L G D
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 427 IIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKC---GCIEMARKL 483
+ ++ A++ L + LH + E SL+ YAKC G ++ RK+
Sbjct: 270 FTLSSVFSACAELENLSLGKQLHSW--AIRSGLVDDVECSLVDMYAKCSADGSVDDCRKV 327
Query: 484 FDEGKSSHKDIIAWNSMISAYSKHGEW-FQCFELYNQM-KLSNVKPDQVTFLGLLTACVN 541
FD + +++W ++I+ Y K+ + L+++M +V+P+ TF AC N
Sbjct: 328 FD--RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Query: 542 SGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETV 591
GK++ + G + ++ + ++ ++++A + E++
Sbjct: 386 LSDPRVGKQVLGQAFK-RGLASNSSVANSVISMFVKSDRMEDAQRAFESL 434
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 322 bits (824), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 198/650 (30%), Positives = 342/650 (52%), Gaps = 16/650 (2%)
Query: 28 FTTSSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
+T SS+L C + L + + AR G ++ + + ++D Y K G + +VF
Sbjct: 252 YTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSR 310
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHE-QG 143
NP V ++ +L ++ + L ++KEM + + + + V+ +C S +
Sbjct: 311 IPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEA 370
Query: 144 KMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN----AHEPLEGMSVTELAYWNNMISQA 199
VHA + K G V +L+ +Y K+G ++ E L+ + + N MI+
Sbjct: 371 SQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSF 428
Query: 200 FESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGEL 259
+S K + +LF+RM +E ++ + +V +LL L L +G+ +H + S L +L
Sbjct: 429 SQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDL 485
Query: 260 TVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRS 319
TV ++L ++Y K GSL+++ +F+ +P D W M+S + G +E++ L M+
Sbjct: 486 TVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDD 545
Query: 320 GVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSA 379
G PD T ++ + GK++H + +R G D + + +AL++MYS C L A
Sbjct: 546 GTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLA 605
Query: 380 RRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKI 439
R+++D + + VS S++I ++ H + LF +M + G +D + +IL A
Sbjct: 606 RQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALS 665
Query: 440 GALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNS 499
+H Y +SLL Y+K G I+ K F + + D+IAW +
Sbjct: 666 DESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQ--INGPDLIAWTA 723
Query: 500 MISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLY 559
+I++Y++HG+ + ++YN MK KPD+VTF+G+L+AC + GLV++ MV Y
Sbjct: 724 LIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDY 783
Query: 560 GYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVA 619
G +P H+ CMVD LGR+G++ EA I + + DA V+G LL+ACK+H + L +VA
Sbjct: 784 GIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVA 843
Query: 620 AQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCS 669
A+K I +EP +AG Y+ LSNI A G+WD+V + R ++ G++K PG S
Sbjct: 844 AKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWS 893
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 147/582 (25%), Positives = 270/582 (46%), Gaps = 23/582 (3%)
Query: 21 APFQT-RFFTTSSLLDLCT-KPQHLQQIHA-RFFLHGLHQNSSLSSKLMDCYTKFGLPGL 77
APF RFF S LC + + Q H R +L L + L+ L+ Y+ G
Sbjct: 45 APFNPFRFFNDQSNSRLCNLRTTKILQAHLLRRYL--LPFDVFLTKSLLSWYSNSGSMAD 102
Query: 78 SQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFS 137
+ K+F PD V + ++ Q E++L + +M +E S V+ +C +
Sbjct: 103 AAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSA 162
Query: 138 VSHEQ-GKMVHAQIVKLGMDAFDLVRNSLVELYEKN-GFLNAHEPLEGMSVTELAYWNNM 195
+ ++V +K+G +++V ++L++++ KN F +A++ + WN +
Sbjct: 163 LQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTI 222
Query: 196 ISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNL 255
I+ A + F LF M +P+S T ++L + L L+ G+ + + +I
Sbjct: 223 IAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIK--- 279
Query: 256 CG--ELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELV 313
CG ++ V TA++ +Y K G + +A +F ++P +V W +M+S Y + +LE+
Sbjct: 280 CGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIF 339
Query: 314 YCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSAC 373
M SGV + T IS+ + Q+HA V ++G SV ALI MYS
Sbjct: 340 KEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKS 399
Query: 374 NGLNSARRIFDLITD---KTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVI 430
++ + ++F+ + D + +V + MI + + + +A+ LF M G R D V
Sbjct: 400 GDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVC 457
Query: 431 NILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSS 490
++L + L+ + +HGY +SL Y+KCG +E + KLF
Sbjct: 458 SLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQ--GIP 512
Query: 491 HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKE 550
KD W SMIS ++++G + L+++M PD+ T +LT C + + +GKE
Sbjct: 513 FKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKE 572
Query: 551 IFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVP 592
I + G + + +V++ + G + A ++ + +P
Sbjct: 573 IHGYTLRA-GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 183/391 (46%), Gaps = 10/391 (2%)
Query: 23 FQTRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVF 82
+T F+ SLL + +Q+H GL + ++ S L Y+K G S K+F
Sbjct: 449 LRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLF 508
Query: 83 YFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFS-VSHE 141
D+ +++++ +++G + + L+ EM++ PDE + + VL C S S
Sbjct: 509 QGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLP 568
Query: 142 QGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAF 200
+GK +H ++ G+D + ++LV +Y K G L A + + + + +++IS
Sbjct: 569 RGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYS 628
Query: 201 ESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELT 260
+ G +++ F LF M +S + ++L++ +G +H+ I LC E +
Sbjct: 629 QHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPS 688
Query: 261 VNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG 320
V ++LL+MY K GS+ D F ++ DL+ W ++++YA +G E+L++ M G
Sbjct: 689 VGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKG 748
Query: 321 VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHN----ALIDMYSACNGL 376
+PD T + +S+ + H ++ + H+ DY + N ++D L
Sbjct: 749 FKPDKVTFVGVLSACS---HGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRL 805
Query: 377 NSARR-IFDLITDKTVVSWSAMIKAHAVHDQ 406
A I ++ + W ++ A +H +
Sbjct: 806 REAESFINNMHIKPDALVWGTLLAACKIHGE 836
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 321 bits (823), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 212/677 (31%), Positives = 354/677 (52%), Gaps = 32/677 (4%)
Query: 43 LQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNL-- 100
L+QI GL + + S L+ + K G ++KVF E ++V + ++ L
Sbjct: 227 LEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVR 286
Query: 101 SQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCF-------SVSHEQGKMVHAQIVKL 153
++GE LF M SM +L S F V ++G+ VH ++
Sbjct: 287 QKWGEEATKLF----MDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITT 342
Query: 154 GMDAFDL-VRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQL 211
G+ F + + N LV +Y K G + +A M+ + WN+MI+ ++G E +
Sbjct: 343 GLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVER 402
Query: 212 FSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVK 271
+ MR+ +I P S T+I+ L S L K+GQ +H + + ++V+ AL+++Y +
Sbjct: 403 YKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAE 462
Query: 272 LGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESL-ELVYCMV---RSGVRPDMFT 327
G L + R +F MP +D V WN ++ A A + + SL E V C + R+G + + T
Sbjct: 463 TGYLNECRKIFSSMPEHDQVSWNSIIGALARS---ERSLPEAVVCFLNAQRAGQKLNRIT 519
Query: 328 AIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLIT 387
+S+++ L E GKQ+H ++N + + NALI Y C ++ +IF +
Sbjct: 520 FSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMA 579
Query: 388 DK-TVVSWSAMIKAHAVHDQCL-EALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYV 445
++ V+W++MI + +H++ L +AL L M G R+D + +L FA + L
Sbjct: 580 ERRDNVTWNSMISGY-IHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERG 638
Query: 446 RYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYS 505
+H ++L+ Y+KCG ++ A + F+ ++ +WNSMIS Y+
Sbjct: 639 MEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFN--TMPVRNSYSWNSMISGYA 696
Query: 506 KHGEWFQCFELYNQMKL-SNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPS 564
+HG+ + +L+ MKL PD VTF+G+L+AC ++GL+++G + F+ M D YG P
Sbjct: 697 RHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPR 756
Query: 565 QEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEV---AAQ 621
EH +CM D+LGRAG++D+ IE +P+ + ++ +L AC ++ R AE+ AA+
Sbjct: 757 IEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGAC-CRANGRKAELGKKAAE 815
Query: 622 KLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFR 681
L +EP+NA NYVLL N+YAA G+W+ + K R ++D +KK G SW+ VH F
Sbjct: 816 MLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFV 875
Query: 682 VADQSHPRSVDIYSILK 698
D+SHP + IY LK
Sbjct: 876 AGDKSHPDADVIYKKLK 892
Score = 173 bits (438), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 146/565 (25%), Positives = 260/565 (46%), Gaps = 17/565 (3%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTK-FGLPGLSQKVFYFTENPDSVIYSAILRNLSQ 102
+QIH F ++ +S+ L+ Y K G G + F E +SV +++I+ SQ
Sbjct: 124 RQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQ 183
Query: 103 FGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKM---VHAQIVKLGMDAFD 159
G+ ++ M P E + ++ + S++ ++ + I K G+
Sbjct: 184 AGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDL 243
Query: 160 LVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKE 218
V + LV + K+G L+ A + M N ++ EE +LF M
Sbjct: 244 FVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM 303
Query: 219 -NIQPNSITVINLLRSTVDLHL-----LKIGQALHSLIIVSNLCGELT-VNTALLSMYVK 271
++ P S + LL S + L LK G+ +H +I + L + + L++MY K
Sbjct: 304 IDVSPESYVI--LLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAK 361
Query: 272 LGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPA 331
GS+ DAR +F M D V WN M++ NGC E++E M R + P FT I +
Sbjct: 362 CGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISS 421
Query: 332 ISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTV 391
+SS LK + G+Q+H ++ G D VSV NAL+ +Y+ LN R+IF + +
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 481
Query: 392 VSWSAMIKAHAVHDQCL-EALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHG 450
VSW+++I A A ++ L EA+ F+ + G +++ I ++L + + + +HG
Sbjct: 482 VSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHG 541
Query: 451 YXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEW 510
E +L+A Y KCG ++ K+F + +D + WNSMIS Y +
Sbjct: 542 LALKNNIADEATTENALIACYGKCGEMDGCEKIFSR-MAERRDNVTWNSMISGYIHNELL 600
Query: 511 FQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHAC 570
+ +L M + + D + +L+A + +++G E+ V + +
Sbjct: 601 AKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC-LESDVVVGSA 659
Query: 571 MVDLLGRAGQIDEASKIIETVPLNS 595
+VD+ + G++D A + T+P+ +
Sbjct: 660 LVDMYSKCGRLDYALRFFNTMPVRN 684
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 138/577 (23%), Positives = 265/577 (45%), Gaps = 24/577 (4%)
Query: 47 HARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEH 106
H+R + + L ++ L + L++ Y + G ++KVF + V ++ I+ S+ GEH
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 107 EKTLFLYKEMVEKSMYPDEESCSFVLRSC---FSVSHEQGKMVHAQIVKLGMDAFDLVRN 163
++ L ++MV++ ++ ++ + VLR+C SV G+ +H + KL +V N
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 164 SLVELYEK--NGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQ 221
L+ +Y K A + V WN++IS ++G F++FS M+ + +
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 222 PNSITVINLLRSTVDLHL--LKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDAR 279
P T +L+ + L +++ + + I S L +L V + L+S + K GSL AR
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263
Query: 280 LMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRS-GVRPD----MFTAIPAISS 334
+F +M + V N ++ +E+ +L M V P+ + ++ P S
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSL 323
Query: 335 ITQLKHTEWGKQMHAHVIRNG-SDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVS 393
++ + G+++H HVI G D+ V + N L++MY+ C + ARR+F +TDK VS
Sbjct: 324 AEEVGLKK-GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVS 382
Query: 394 WSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXX 453
W++MI + +EA+ + M+ +I+ L + A + + +HG
Sbjct: 383 WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL 442
Query: 454 XXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHG----E 509
+L+ YA+ G + RK+F D ++WNS+I A ++ E
Sbjct: 443 KLGIDLNVSVSNALMTLYAETGYLNECRKIFS--SMPEHDQVSWNSIIGALARSERSLPE 500
Query: 510 WFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHA 569
CF + + K +++TF +L+A + + GK+I + + +A
Sbjct: 501 AVVCFL---NAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENA 557
Query: 570 CMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSA 606
++ G+ G++D KI + D + ++S
Sbjct: 558 -LIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 6/219 (2%)
Query: 325 MFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFD 384
M +P + + H + H+ + +N D V + N LI+ Y SAR++FD
Sbjct: 1 MTNCVPLSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFD 60
Query: 385 LITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALH- 443
+ + VSW+ ++ ++ + + EAL +M G + +++L +IG++
Sbjct: 61 EMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGI 120
Query: 444 -YVRYLHGYXXXXXXXXXXXXETSLLASYAKC-GCIEMARKLFDEGKSSHKDIIAWNSMI 501
+ R +HG L++ Y KC G + A F G K+ ++WNS+I
Sbjct: 121 LFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAF--GDIEVKNSVSWNSII 178
Query: 502 SAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLL-TAC 539
S YS+ G+ F +++ M+ +P + TF L+ TAC
Sbjct: 179 SVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTAC 217
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 318 bits (816), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 199/658 (30%), Positives = 341/658 (51%), Gaps = 30/658 (4%)
Query: 28 FTTSSLLDLCTKPQHLQQIHARFFLHGL-------HQNSSLSSKLMDCYTKFGLPGLSQK 80
FT ++ C + L H F+HGL +N+++ + + Y+K G L
Sbjct: 126 FTAPMVVSACAE---LLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGF--LQDA 180
Query: 81 VFYFTENPDS--VIYSAILRNLSQFGEHEKTLFLYKEM------VEKSMYPDEESCSFVL 132
F E PD V ++AI+ Q GE E L +M V+K P C F
Sbjct: 181 CLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKP-NPRTLECGF-- 237
Query: 133 RSCFSVSH-EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELA 190
++C ++ ++G+ +H VK G+ + V++S+ Y K+G + A+ + ++
Sbjct: 238 QACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMF 297
Query: 191 YWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLI 250
W ++I+ SG MEE F +F M+ + + P+ + + L+ + L+ G+A H +
Sbjct: 298 SWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFV 357
Query: 251 IVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPR-NDLVVWNIMVSAYAGNGCPKES 309
I + TV +LLSMY K L A +F ++ + WN M+ Y C +
Sbjct: 358 IRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKC 417
Query: 310 LELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDM 369
+EL + G+ D +A ISS + + GK +H +V++ D +SV N+LID+
Sbjct: 418 IELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDL 477
Query: 370 YSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIV 429
Y L A R+F D V++W+AMI ++ +Q +A++LF M + I +
Sbjct: 478 YGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITL 536
Query: 430 INILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKS 489
+ +L G+L + +H Y +L+ YAKCG +E +R+LFD G
Sbjct: 537 VTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAG-- 594
Query: 490 SHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGK 549
+ KD + WN MIS Y HG+ L++QM+ S+VKP TFL LL+AC ++GLV++GK
Sbjct: 595 NQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGK 654
Query: 550 EIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKM 609
++F +M Y +P+ +H++C+VDLL R+G ++EA + ++P + D ++G LLS+C
Sbjct: 655 KLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMT 713
Query: 610 HSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPG 667
H + + A++ + +P+N G Y++L+N+Y+AAGKW++ + R +R+ G+ K G
Sbjct: 714 HGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAG 771
Score = 202 bits (514), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 153/619 (24%), Positives = 292/619 (47%), Gaps = 31/619 (5%)
Query: 10 LLNIRKIPYIVAPFQTRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCY 69
++ +RK+ A + R + L D + L++ +A GL +N ++SKL+ Y
Sbjct: 11 VVTLRKLSSSSASYVDRHISVI-LCDQSLSLESLRKHNALIITGGLSENIFVASKLISSY 69
Query: 70 TKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCS 129
+G P LS +VF+ D ++++I++ G++ ++L + M+ PD +
Sbjct: 70 ASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAP 129
Query: 130 FVLRSCFS-VSHEQGKMVHAQIVK-LGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSV 186
V+ +C + G VH ++K G D V S V Y K GFL +A + M
Sbjct: 130 MVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPD 189
Query: 187 TELAYWNNMISQAFESGKMEECFQLFSRMRKENI---QPNSITVINLLRSTVDLHLLKIG 243
++ W +IS ++G+ E +M +PN T+ ++ +L LK G
Sbjct: 190 RDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEG 249
Query: 244 QALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGN 303
+ LH + + L V +++ S Y K G+ +A L F ++ D+ W ++++ A +
Sbjct: 250 RCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARS 309
Query: 304 GCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVH 363
G +ES ++ + M G+ PD I+ + ++ GK H VIR+ +V
Sbjct: 310 GDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVC 369
Query: 364 NALIDMYSACNGLNSARRIFDLITDK-TVVSWSAMIKAHA---VHDQCLEALSLFIEMKL 419
N+L+ MY L+ A ++F I+++ +W+ M+K + H +C+E LF +++
Sbjct: 370 NSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIE---LFRKIQN 426
Query: 420 CGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEM 479
G +D +++ + + IGA+ + LH Y SL+ Y K G + +
Sbjct: 427 LGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTV 486
Query: 480 ARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTAC 539
A ++F E + ++I WN+MI++Y + + L+++M N KP +T + LL AC
Sbjct: 487 AWRMFCEADT---NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMAC 543
Query: 540 VNSGLVDKGKEIFKEMVDLYGYQPSQEHH------ACMVDLLGRAGQIDEASKIIETVPL 593
VN+G +++G+ I + Y EH A ++D+ + G ++++ ++ +
Sbjct: 544 VNTGSLERGQMIHR-------YITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGN- 595
Query: 594 NSDARVYGPLLSACKMHSD 612
DA + ++S MH D
Sbjct: 596 QKDAVCWNVMISGYGMHGD 614
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 167/357 (46%), Gaps = 28/357 (7%)
Query: 215 MRKENIQPNSITVINLLRST----VDLHLLKI--GQAL--------HSLIIVSNLCGELT 260
M + ++PN + + L S+ VD H+ I Q+L ++LII L +
Sbjct: 1 MLRRLLKPNLVVTLRKLSSSSASYVDRHISVILCDQSLSLESLRKHNALIITGGLSENIF 60
Query: 261 VNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG 320
V + L+S Y G + +F + R D+ +WN ++ A+ NG SL + M+ SG
Sbjct: 61 VASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSG 120
Query: 321 VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGS-DYQVSVHNALIDMYSACNGLNSA 379
PD FTA +S+ +L G +H V+++G D +V + + YS C L A
Sbjct: 121 QSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDA 180
Query: 380 RRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTF--- 436
+FD + D+ VV+W+A+I H + + L +M G+ VD + F
Sbjct: 181 CLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQAC 240
Query: 437 AKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMA----RKLFDEGKSSHK 492
+ +GAL R LHG+ ++S+ + Y+K G A R+L DE
Sbjct: 241 SNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDE------ 294
Query: 493 DIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGK 549
D+ +W S+I++ ++ G+ + F+++ +M+ + PD V L+ LV +GK
Sbjct: 295 DMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGK 351
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 318 bits (816), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 174/574 (30%), Positives = 307/574 (53%), Gaps = 8/574 (1%)
Query: 131 VLRSCFSVS-HEQGKMVHAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTE 188
+LR C +QG VH ++K G + N L+++Y K L A++ + M
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 189 LAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHS 248
+ W+ ++S +G ++ LFS M ++ I PN T L++ L+ L+ G +H
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 249 LIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKE 308
+ + V +L+ MY K G + +A +F ++ L+ WN M++ + G +
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 309 SLELVYCMVRSGV--RPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNG--SDYQVSVHN 364
+L+ M + + RPD FT + + + GKQ+H ++R+G ++
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251
Query: 365 ALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRV 424
+L+D+Y C L SAR+ FD I +KT++SWS++I +A + +EA+ LF ++ +++
Sbjct: 252 SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI 311
Query: 425 DFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLF 484
D + +I+ FA L + + S++ Y KCG ++ A K F
Sbjct: 312 DSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCF 371
Query: 485 DEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGL 544
E KD+I+W +I+ Y KHG + ++ +M N++PD+V +L +L+AC +SG+
Sbjct: 372 AE--MQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGM 429
Query: 545 VDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLL 604
+ +G+E+F ++++ +G +P EH+AC+VDLLGRAG++ EA +I+T+P+ + ++ LL
Sbjct: 430 IKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
Query: 605 SACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKK 664
S C++H D L + + L+ ++ KN NYV++SN+Y AG W++ R +GLKK
Sbjct: 490 SLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKK 549
Query: 665 TPGCSWLESNGQVHEFRVADQSHPRSVDIYSILK 698
G SW+E +VH FR + SHP + I LK
Sbjct: 550 EAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLK 583
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 140/564 (24%), Positives = 257/564 (45%), Gaps = 52/564 (9%)
Query: 32 SLLDLCTK---PQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENP 88
S+L +CT+ Q+H G N S+ L+D Y K P ++ KVF
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 89 DSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVH 147
+ V +SA++ G+ + +L L+ EM + +YP+E + S L++C ++ E+G +H
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130
Query: 148 AQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTE-LAYWNNMISQAFESGKME 206
+K+G + V NSLV++Y K G +N E + V L WN MI+ +G
Sbjct: 131 GFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGS 190
Query: 207 ECFQLFSRMRKENIQ--PNSITVINLLRSTVDLHLLKIGQALHSLIIVSNL-C-GELTVN 262
+ F M++ NI+ P+ T+ +LL++ ++ G+ +H ++ S C T+
Sbjct: 191 KALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATIT 250
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
+L+ +YVK G L AR F+++ ++ W+ ++ YA G E++ L + +
Sbjct: 251 GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQ 310
Query: 323 PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRI 382
D F I GKQM A ++ S + SV N+++DMY C ++ A +
Sbjct: 311 IDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKC 370
Query: 383 FDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGAL 442
F + K V+SW+ +I + H +++ +F EM + NI P
Sbjct: 371 FAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEM----------LRHNIEPD------- 413
Query: 443 HYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHK---DIIAWNS 499
V YL ++L++ + G I+ +LF + +H + +
Sbjct: 414 -EVCYL-----------------AVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYAC 455
Query: 500 MISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLY 559
++ + G + L + M +KP+ + LL+ C G ++ GKE+ K ++ +
Sbjct: 456 VVDLLGRAGRLKEAKHLIDTMP---IKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRID 512
Query: 560 GYQPSQEHHACMVDLLGRAGQIDE 583
P+ ++ M +L G+AG +E
Sbjct: 513 AKNPA--NYVMMSNLYGQAGYWNE 534
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 178/375 (47%), Gaps = 13/375 (3%)
Query: 226 TVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKM 285
++++LR L G +H ++ S L + L+ MY K A +F+ M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 286 PRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGK 345
P ++V W+ ++S + NG K SL L M R G+ P+ FT + + L E G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 346 QMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHD 405
Q+H ++ G + V V N+L+DMYS C +N A ++F I D++++SW+AMI
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 406 QCLEALSLFIEMKLCGT--RVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXX--XXX 461
+AL F M+ R D + ++L + G ++ + +HG+
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 462 XXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMK 521
SL+ Y KCG + ARK FD+ K K +I+W+S+I Y++ GE+ + L+ +++
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIK--EKTMISWSSLILGYAQEGEFVEAMGLFKRLQ 305
Query: 522 LSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACM---VDLLGRA 578
N + D ++ + L+ +GK++ V L PS + + VD+ +
Sbjct: 306 ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKL----PSGLETSVLNSVVDMYLKC 361
Query: 579 GQIDEASKIIETVPL 593
G +DEA K + L
Sbjct: 362 GLVDEAEKCFAEMQL 376
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 186/388 (47%), Gaps = 11/388 (2%)
Query: 28 FTTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
FT S+ L C L+ QIH G + + L+D Y+K G ++KVF
Sbjct: 108 FTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRR 167
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSM--YPDEESCSFVLRSCFSVSH-E 141
+ + ++A++ G K L + M E ++ PDE + + +L++C S
Sbjct: 168 IVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIY 227
Query: 142 QGKMVHAQIVKLGM--DAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQ 198
GK +H +V+ G + + SLV+LY K G+L +A + + + + W+++I
Sbjct: 228 AGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILG 287
Query: 199 AFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGE 258
+ G+ E LF R+++ N Q +S + +++ D LL+ G+ + +L + E
Sbjct: 288 YAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLE 347
Query: 259 LTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVR 318
+V +++ MY+K G + +A F +M D++ W ++++ Y +G K+S+ + Y M+R
Sbjct: 348 TSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLR 407
Query: 319 SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIR-NGSDYQVSVHNALIDMYSACNGLN 377
+ PD + +S+ + + G+++ + ++ +G +V + ++D+ L
Sbjct: 408 HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLK 467
Query: 378 SARRIFDLITDKTVVS-WSAMIKAHAVH 404
A+ + D + K V W ++ VH
Sbjct: 468 EAKHLIDTMPIKPNVGIWQTLLSLCRVH 495
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 317 bits (811), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 202/679 (29%), Positives = 342/679 (50%), Gaps = 26/679 (3%)
Query: 45 QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFG 104
QIH G + +S L+D Y K S +VF +SV +SAI+ Q
Sbjct: 201 QIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNN 260
Query: 105 EHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQIVKLGMDAFDLVRN 163
L +KEM + + + + VLRSC ++S + G +HA +K A +VR
Sbjct: 261 LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRT 320
Query: 164 SLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQP 222
+ +++Y K + +A + +N MI+ + + LF R+ +
Sbjct: 321 ATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGF 380
Query: 223 NSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMF 282
+ I++ + R+ + L G ++ L I S+L ++ V A + MY K +L +A +F
Sbjct: 381 DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVF 440
Query: 283 EKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTE 342
++M R D V WN +++A+ NG E+L L M+RS + PD FT + + T
Sbjct: 441 DEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLG 499
Query: 343 WGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKT------------ 390
+G ++H+ ++++G SV +LIDMYS C + A +I +
Sbjct: 500 YGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKM 559
Query: 391 --------VVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGAL 442
VSW+++I + + +Q +A LF M G D +L T A + +
Sbjct: 560 HNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASA 619
Query: 443 HYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMIS 502
+ +H ++L+ Y+KCG + +R +F+ KS +D + WN+MI
Sbjct: 620 GLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFE--KSLRRDFVTWNAMIC 677
Query: 503 AYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQ 562
Y+ HG+ + +L+ +M L N+KP+ VTF+ +L AC + GL+DKG E F M YG
Sbjct: 678 GYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLD 737
Query: 563 PSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMH-SDPRLAEVAAQ 621
P H++ MVD+LG++G++ A ++I +P +D ++ LL C +H ++ +AE A
Sbjct: 738 PQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATA 797
Query: 622 KLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFR 681
L+ ++P+++ Y LLSN+YA AG W+KV+ +R +R LKK PGCSW+E ++H F
Sbjct: 798 ALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFL 857
Query: 682 VADQSHPRSVDIYSILKVM 700
V D++HPR +IY L ++
Sbjct: 858 VGDKAHPRWEEIYEELGLI 876
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 122/494 (24%), Positives = 226/494 (45%), Gaps = 13/494 (2%)
Query: 129 SFVLRSCFSVSHEQGKMVHAQIVKLGMDAFDLVR-NSLVELYEK-NGFLNAHEPLEGMSV 186
+FVL V V A +V M D+V N ++ Y K N A+ M V
Sbjct: 83 TFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPV 142
Query: 187 TELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQAL 246
++ WN+M+S ++G+ + ++F M +E I+ + T +L+ L +G +
Sbjct: 143 RDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQI 202
Query: 247 HSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCP 306
H +++ ++ +ALL MY K ++ +F+ +P + V W+ +++ N
Sbjct: 203 HGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLL 262
Query: 307 KESLELVYCM--VRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHN 364
+L+ M V +GV ++ ++ + S L G Q+HAH +++ V
Sbjct: 263 SLALKFFKEMQKVNAGVSQSIYASV--LRSCAALSELRLGGQLHAHALKSDFAADGIVRT 320
Query: 365 ALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRV 424
A +DMY+ C+ + A+ +FD + S++AMI ++ + +AL LF + G
Sbjct: 321 ATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGF 380
Query: 425 DFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLF 484
D I + + A + L ++G + + Y KC + A ++F
Sbjct: 381 DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVF 440
Query: 485 DEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGL 544
DE + +D ++WN++I+A+ ++G+ ++ L+ M S ++PD+ TF +L AC G
Sbjct: 441 DEMR--RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GS 497
Query: 545 VDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLL 604
+ G EI +V G + ++D+ + G I+EA KI A V G +
Sbjct: 498 LGYGMEIHSSIVK-SGMASNSSVGCSLIDMYSKCGMIEEAEKI--HSRFFQRANVSGTME 554
Query: 605 SACKMHSDPRLAEV 618
KMH + RL E+
Sbjct: 555 ELEKMH-NKRLQEM 567
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 316 bits (809), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 185/658 (28%), Positives = 337/658 (51%), Gaps = 5/658 (0%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQF 103
+QI + GL ++ + L+ G + +F D++ +++I +Q
Sbjct: 163 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 222
Query: 104 GEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQIVKLGMDAFDLVR 162
G E++ ++ M + + S +L V H++ G+ +H +VK+G D+ V
Sbjct: 223 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 282
Query: 163 NSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQ 221
N+L+ +Y G + A+ + M +L WN++++ G+ + L M
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 342
Query: 222 PNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLM 281
N +T + L + + G+ LH L++VS L + AL+SMY K+G + ++R +
Sbjct: 343 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 402
Query: 282 FEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISS-ITQLKH 340
+MPR D+V WN ++ YA + P ++L M GV + T + +S+ +
Sbjct: 403 LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL 462
Query: 341 TEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKA 400
E GK +HA+++ G + V N+LI MY+ C L+S++ +F+ + ++ +++W+AM+ A
Sbjct: 463 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 522
Query: 401 HAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXX 460
+A H E L L +M+ G +D L AK+ L + LHG
Sbjct: 523 NAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHD 582
Query: 461 XXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQM 520
+ Y+KCG I K+ S ++ + +WN +ISA +HG + + +++M
Sbjct: 583 SFIFNAAADMYSKCGEIGEVVKMLP--PSVNRSLPSWNILISALGRHGYFEEVCATFHEM 640
Query: 521 KLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQ 580
+KP VTF+ LLTAC + GLVDKG + + +G +P+ EH C++DLLGR+G+
Sbjct: 641 LEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGR 700
Query: 581 IDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNI 640
+ EA I +P+ + V+ LL++CK+H + AA+ L +EP++ YVL SN+
Sbjct: 701 LAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNM 760
Query: 641 YAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILK 698
+A G+W+ V +R + + +KK CSW++ +V F + D++HP++++IY+ L+
Sbjct: 761 FATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLE 818
Score = 228 bits (580), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 158/591 (26%), Positives = 298/591 (50%), Gaps = 11/591 (1%)
Query: 28 FTTSSLLDLCTKPQHL----QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFY 83
F +SL+ C + + Q+H GL + +S+ ++ Y +GL S+KVF
Sbjct: 42 FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 101
Query: 84 FTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ- 142
+ + V +++++ S GE E+ + +YK M + + +E S S V+ SC + E
Sbjct: 102 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 161
Query: 143 GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFE 201
G+ + Q+VK G+++ V NSL+ + G ++ A+ + MS + WN++ + +
Sbjct: 162 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 221
Query: 202 SGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTV 261
+G +EE F++FS MR+ + + NS TV LL + K G+ +H L++ + V
Sbjct: 222 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 281
Query: 262 NTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGV 321
LL MY G +A L+F++MP DL+ WN +++++ +G ++L L+ M+ SG
Sbjct: 282 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 341
Query: 322 RPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARR 381
+ T A+++ E G+ +H V+ +G Y + NAL+ MY ++ +RR
Sbjct: 342 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 401
Query: 382 IFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGA 441
+ + + VV+W+A+I +A + +AL+ F M++ G ++I V+++L G
Sbjct: 402 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 461
Query: 442 -LHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSM 500
L + LH Y + SL+ YAKCG + ++ LF+ +++II WN+M
Sbjct: 462 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFN--GLDNRNIITWNAM 519
Query: 501 ISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYG 560
++A + HG + +L ++M+ V DQ +F L+A ++++G+++ V L G
Sbjct: 520 LAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL-G 578
Query: 561 YQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHS 611
++ D+ + G+I E K++ +N + L+SA H
Sbjct: 579 FEHDSFIFNAAADMYSKCGEIGEVVKMLPP-SVNRSLPSWNILISALGRHG 628
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/536 (21%), Positives = 249/536 (46%), Gaps = 26/536 (4%)
Query: 89 DSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKM--- 145
+ V ++ ++ + + G + + + +++M + + P SFV+ S + G M
Sbjct: 5 NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPS----SFVIASLVTACGRSGSMFRE 60
Query: 146 ---VHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFE 201
VH + K G+ + V +++ LY G ++ + + E M + W +++ +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 202 SGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTV 261
G+ EE ++ MR E + N ++ ++ S L +G+ + ++ S L +L V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 262 NTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGV 321
+L+SM +G++ A +F++M D + WN + +AYA NG +ES + M R
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 322 RPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARR 381
+ T +S + + H +WG+ +H V++ G D V V N L+ MY+ A
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300
Query: 382 IFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINIL-----PTF 436
+F + K ++SW++++ + + L+AL L M G V+++ + L P F
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360
Query: 437 AKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIA 496
+ G R LHG +L++ Y K G + +R++ + +D++A
Sbjct: 361 FEKG-----RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ--MPRRDVVA 413
Query: 497 WNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSG-LVDKGKEIFKEM 555
WN++I Y++ + + + M++ V + +T + +L+AC+ G L+++GK + +
Sbjct: 414 WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYI 473
Query: 556 VDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHS 611
V G++ + ++ + + G + + + + N + + +L+A H
Sbjct: 474 VSA-GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHG 527
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 218/461 (47%), Gaps = 7/461 (1%)
Query: 184 MSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRS-TVDLHLLKI 242
M V WN M+S G E + F +M I+P+S + +L+ + + +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 243 GQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAG 302
G +H + S L ++ V+TA+L +Y G + +R +FE+MP ++V W ++ Y+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 303 NGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSV 362
G P+E +++ M GV + + ISS LK G+Q+ V+++G + +++V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 363 HNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGT 422
N+LI M + ++ A IFD ++++ +SW+++ A+A + E+ +F M+
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 423 RVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARK 482
V+ V +L + + R +HG +LL YA G A
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300
Query: 483 LFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNS 542
+F + + KD+I+WNS+++++ G L M S + VTF L AC
Sbjct: 301 VFKQMPT--KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 358
Query: 543 GLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGP 602
+KG+ I +V + G +Q +V + G+ G++ E+ +++ +P D +
Sbjct: 359 DFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNA 416
Query: 603 LLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAA 643
L+ DP A +AA + + +E ++ NY+ + ++ +A
Sbjct: 417 LIGGYAEDEDPDKA-LAAFQTMRVEGVSS-NYITVVSVLSA 455
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 315 bits (808), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 196/644 (30%), Positives = 333/644 (51%), Gaps = 7/644 (1%)
Query: 61 LSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKS 120
+S++++D Y KFG G + +F DSV ++ ++ + G+ E L+ M
Sbjct: 37 VSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSG 96
Query: 121 MYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAH 178
D S S +L+ SV + G+ VH ++K G + V +SLV++Y K +A
Sbjct: 97 SDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAF 156
Query: 179 EPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMR-KENIQPNSITVINLLRSTVDL 237
E + +S WN +I+ + ++ F L M K + ++ T LL D
Sbjct: 157 EAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDP 216
Query: 238 HLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMP-RNDLVVWNIM 296
+ + +H+ ++ L E+T+ A++S Y GS+ DA+ +F+ + DL+ WN M
Sbjct: 217 MFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSM 276
Query: 297 VSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGS 356
++ ++ + + + EL M R V D++T +S+ + +H +GK +H VI+ G
Sbjct: 277 IAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGL 336
Query: 357 DYQVSVHNALIDMYSA--CNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLF 414
+ S NALI MY + A +F+ + K ++SW+++I A +A+ F
Sbjct: 337 EQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFF 396
Query: 415 IEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKC 474
++ +VD +L + + + L + +H +SL+ Y+KC
Sbjct: 397 SYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKC 456
Query: 475 GCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLG 534
G IE ARK F + S H +AWN+MI Y++HG +L++QM NVK D VTF
Sbjct: 457 GIIESARKCFQQISSKHS-TVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTA 515
Query: 535 LLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLN 594
+LTAC ++GL+ +G E+ M +Y QP EH+A VDLLGRAG +++A ++IE++PLN
Sbjct: 516 ILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLN 575
Query: 595 SDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMR 654
D V L C+ + +A A L+ +EP++ YV LS++Y+ KW++ A ++
Sbjct: 576 PDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVK 635
Query: 655 SFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILK 698
+++RG+KK PG SW+E QV F D+S+P DIY ++K
Sbjct: 636 KMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIK 679
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 315 bits (807), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 185/658 (28%), Positives = 337/658 (51%), Gaps = 5/658 (0%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQF 103
+QI + GL ++ + L+ G + +F D++ +++I +Q
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 104 GEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQIVKLGMDAFDLVR 162
G E++ ++ M + + S +L V H++ G+ +H +VK+G D+ V
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 163 NSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQ 221
N+L+ +Y G + A+ + M +L WN++++ G+ + L M
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 222 PNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLM 281
N +T + L + + G+ LH L++VS L + AL+SMY K+G + ++R +
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 419
Query: 282 FEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISS-ITQLKH 340
+MPR D+V WN ++ YA + P ++L M GV + T + +S+ +
Sbjct: 420 LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL 479
Query: 341 TEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKA 400
E GK +HA+++ G + V N+LI MY+ C L+S++ +F+ + ++ +++W+AM+ A
Sbjct: 480 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 539
Query: 401 HAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXX 460
+A H E L L +M+ G +D L AK+ L + LHG
Sbjct: 540 NAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHD 599
Query: 461 XXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQM 520
+ Y+KCG I K+ S ++ + +WN +ISA +HG + + +++M
Sbjct: 600 SFIFNAAADMYSKCGEIGEVVKMLP--PSVNRSLPSWNILISALGRHGYFEEVCATFHEM 657
Query: 521 KLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQ 580
+KP VTF+ LLTAC + GLVDKG + + +G +P+ EH C++DLLGR+G+
Sbjct: 658 LEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGR 717
Query: 581 IDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNI 640
+ EA I +P+ + V+ LL++CK+H + AA+ L +EP++ YVL SN+
Sbjct: 718 LAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNM 777
Query: 641 YAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILK 698
+A G+W+ V +R + + +KK CSW++ +V F + D++HP++++IY+ L+
Sbjct: 778 FATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLE 835
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 158/591 (26%), Positives = 298/591 (50%), Gaps = 11/591 (1%)
Query: 28 FTTSSLLDLCTKPQHL----QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFY 83
F +SL+ C + + Q+H GL + +S+ ++ Y +GL S+KVF
Sbjct: 59 FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 84 FTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ- 142
+ + V +++++ S GE E+ + +YK M + + +E S S V+ SC + E
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 178
Query: 143 GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFE 201
G+ + Q+VK G+++ V NSL+ + G ++ A+ + MS + WN++ + +
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 202 SGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTV 261
+G +EE F++FS MR+ + + NS TV LL + K G+ +H L++ + V
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298
Query: 262 NTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGV 321
LL MY G +A L+F++MP DL+ WN +++++ +G ++L L+ M+ SG
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358
Query: 322 RPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARR 381
+ T A+++ E G+ +H V+ +G Y + NAL+ MY ++ +RR
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 418
Query: 382 IFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGA 441
+ + + VV+W+A+I +A + +AL+ F M++ G ++I V+++L G
Sbjct: 419 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 478
Query: 442 -LHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSM 500
L + LH Y + SL+ YAKCG + ++ LF+ +++II WN+M
Sbjct: 479 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFN--GLDNRNIITWNAM 536
Query: 501 ISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYG 560
++A + HG + +L ++M+ V DQ +F L+A ++++G+++ V L G
Sbjct: 537 LAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL-G 595
Query: 561 YQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHS 611
++ D+ + G+I E K++ +N + L+SA H
Sbjct: 596 FEHDSFIFNAAADMYSKCGEIGEVVKMLPP-SVNRSLPSWNILISALGRHG 645
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/556 (22%), Positives = 258/556 (46%), Gaps = 26/556 (4%)
Query: 69 YTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESC 128
YTKFG ++ +F + V ++ ++ + + G + + + +++M + + P
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPS---- 57
Query: 129 SFVLRSCFSVSHEQGKM------VHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPL 181
SFV+ S + G M VH + K G+ + V +++ LY G ++ + +
Sbjct: 58 SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 117
Query: 182 EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLK 241
E M + W +++ + G+ EE ++ MR E + N ++ ++ S L
Sbjct: 118 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES 177
Query: 242 IGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYA 301
+G+ + ++ S L +L V +L+SM +G++ A +F++M D + WN + +AYA
Sbjct: 178 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 302 GNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVS 361
NG +ES + M R + T +S + + H +WG+ +H V++ G D V
Sbjct: 238 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 297
Query: 362 VHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCG 421
V N L+ MY+ A +F + K ++SW++++ + + L+AL L M G
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 357
Query: 422 TRVDFIIVINIL-----PTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGC 476
V+++ + L P F + G R LHG +L++ Y K G
Sbjct: 358 KSVNYVTFTSALAACFTPDFFEKG-----RILHGLVVVSGLFYNQIIGNALVSMYGKIGE 412
Query: 477 IEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLL 536
+ +R++ + +D++AWN++I Y++ + + + M++ V + +T + +L
Sbjct: 413 MSESRRVLLQ--MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVL 470
Query: 537 TACVNSG-LVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNS 595
+AC+ G L+++GK + +V G++ + ++ + + G + + + + N
Sbjct: 471 SACLLPGDLLERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NR 528
Query: 596 DARVYGPLLSACKMHS 611
+ + +L+A H
Sbjct: 529 NIITWNAMLAANAHHG 544
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 130/271 (47%), Gaps = 3/271 (1%)
Query: 268 MYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFT 327
MY K G +K AR +F+ MP + V WN M+S G E +E M G++P F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 328 AIPAISSITQLKHT-EWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLI 386
+++ + G Q+H V ++G V V A++ +Y ++ +R++F+ +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 387 TDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVR 446
D+ VVSW++++ ++ + E + ++ M+ G + + ++ + + R
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 447 YLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSK 506
+ G E SL++ G ++ A +FD+ S +D I+WNS+ +AY++
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQ--MSERDTISWNSIAAAYAQ 238
Query: 507 HGEWFQCFELYNQMKLSNVKPDQVTFLGLLT 537
+G + F +++ M+ + + + T LL+
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 269
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 315 bits (807), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 194/657 (29%), Positives = 343/657 (52%), Gaps = 5/657 (0%)
Query: 46 IHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGE 105
++ + G + + + L+D Y++ GL +++VF D V +++++ S G
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 106 HEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSV-SHEQGKMVHAQIVKLGMDAFDLVRNS 164
+E+ L +Y E+ + PD + S VL + ++ +QG+ +H +K G+++ +V N
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 165 LVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPN 223
LV +Y K +A + M V + +N MI + +EE ++F + +P+
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPD 306
Query: 224 SITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFE 283
+TV ++LR+ L L + + +++ ++ + E TV L+ +Y K G + AR +F
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 284 KMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEW 343
M D V WN ++S Y +G E+++L M+ + D T + IS T+L ++
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 344 GKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAV 403
GK +H++ I++G +SV NALIDMY+ C + + +IF + V+W+ +I A
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVR 486
Query: 404 HDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXX 463
L + +M+ D + LP A + A + +H
Sbjct: 487 FGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQI 546
Query: 464 ETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLS 523
+L+ Y+KCGC+E + ++F+ + S +D++ W MI AY +GE + E + M+ S
Sbjct: 547 GNALIEMYSKCGCLENSSRVFE--RMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKS 604
Query: 524 NVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDE 583
+ PD V F+ ++ AC +SGLVD+G F++M Y P EH+AC+VDLL R+ +I +
Sbjct: 605 GIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISK 664
Query: 584 ASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAA 643
A + I+ +P+ DA ++ +L AC+ D AE ++++I + P + G +L SN YAA
Sbjct: 665 AEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAA 724
Query: 644 AGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILKVM 700
KWDKV+ +R L+D+ + K PG SW+E VH F D S P+S IY L+++
Sbjct: 725 LRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEIL 781
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 166/631 (26%), Positives = 314/631 (49%), Gaps = 19/631 (3%)
Query: 19 IVAPFQTRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLS 78
+ +PF +R ++SS L+ L++IHA GL + S KL+D Y+ F P S
Sbjct: 5 VSSPFISRALSSSSNLN------ELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASS 58
Query: 79 QKVFYFTENPDSV-IYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFS 137
VF +V ++++I+R S+ G + L Y ++ E + PD+ + V+++C
Sbjct: 59 LSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAG 118
Query: 138 V-SHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNM 195
+ E G +V+ QI+ +G ++ V N+LV++Y + G L A + + M V +L WN++
Sbjct: 119 LFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSL 178
Query: 196 ISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNL 255
IS G EE +++ ++ I P+S TV ++L + +L ++K GQ LH + S +
Sbjct: 179 ISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGV 238
Query: 256 CGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYC 315
+ VN L++MY+K DAR +F++M D V +N M+ Y +ES+ + +
Sbjct: 239 NSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRM-FL 297
Query: 316 MVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNG 375
+PD+ T + + L+ K ++ ++++ G + +V N LID+Y+ C
Sbjct: 298 ENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGD 357
Query: 376 LNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPT 435
+ +AR +F+ + K VSW+++I + +EA+ LF M + + D I + ++
Sbjct: 358 MITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417
Query: 436 FAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDII 495
++ L + + LH +L+ YAKCG + + K+F + D +
Sbjct: 418 STRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG--DTV 475
Query: 496 AWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEM 555
WN++ISA + G++ ++ QM+ S V PD TFL L C + GKEI +
Sbjct: 476 TWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCL 535
Query: 556 VDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRL 615
+ +GY+ + ++++ + G ++ +S++ E + D + ++ A M+ +
Sbjct: 536 LR-FGYESELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGE--- 590
Query: 616 AEVAAQKLINMEPKN--AGNYVLLSNIYAAA 644
E A + +ME + V ++ IYA +
Sbjct: 591 GEKALETFADMEKSGIVPDSVVFIAIIYACS 621
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 315 bits (806), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 203/633 (32%), Positives = 329/633 (51%), Gaps = 30/633 (4%)
Query: 69 YTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESC 128
Y + G + +VF SV Y+ ++ + GE E L+ EM E+ + S
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV----SW 129
Query: 129 SFVLRSCFSVSHEQGKMVHAQIVKLGMDAFDLVR-NSLVELYEKNGFLN-AHEPLEGMSV 186
+ +++ + + GK A+ + M D+ N+++ Y +NG ++ A + M
Sbjct: 130 NVMIKG-YVRNRNLGK---ARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPE 185
Query: 187 TELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQAL 246
WN ++S ++ KMEE LF +EN S + L +++ Q
Sbjct: 186 KNDVSWNALLSAYVQNSKMEEACMLFKS--RENWALVSWNCL-LGGFVKKKKIVEARQFF 242
Query: 247 HSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCP 306
S+ N+ ++ NT +++ Y + G + +AR +F++ P D+ W MVS Y N
Sbjct: 243 DSM----NVRDVVSWNT-IITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMV 297
Query: 307 KESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQM-HAHVIRNGSDYQVSVHNA 365
+E+ EL M + + ++ Q + E K++ RN VS N
Sbjct: 298 EEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCRN-----VSTWNT 348
Query: 366 LIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVD 425
+I Y+ C ++ A+ +FD + + VSW+AMI ++ EAL LF++M+ G R++
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLN 408
Query: 426 FIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFD 485
+ L T A + AL + LHG +LL Y KCG IE A LF
Sbjct: 409 RSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFK 468
Query: 486 EGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLV 545
E + KDI++WN+MI+ YS+HG + MK +KPD T + +L+AC ++GLV
Sbjct: 469 E--MAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLV 526
Query: 546 DKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLS 605
DKG++ F M YG P+ +H+ACMVDLLGRAG +++A +++ +P DA ++G LL
Sbjct: 527 DKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLG 586
Query: 606 ACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKT 665
A ++H + LAE AA K+ MEP+N+G YVLLSN+YA++G+W V K+R +RD+G+KK
Sbjct: 587 ASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKV 646
Query: 666 PGCSWLESNGQVHEFRVADQSHPRSVDIYSILK 698
PG SW+E + H F V D+ HP +I++ L+
Sbjct: 647 PGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLE 679
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/500 (21%), Positives = 206/500 (41%), Gaps = 75/500 (15%)
Query: 179 EPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRM-RKENIQPNSITVINLLRSTVDL 237
+PL +++ WN IS +G+ E ++F RM R ++ N + L +L
Sbjct: 54 KPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFEL 113
Query: 238 HLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMV 297
+ ++ N+ ++ YV+ +L AR +FE MP D+ WN M+
Sbjct: 114 ARKLFDEMPERDLVSWNV---------MIKGYVRNRNLGKARELFEIMPERDVCSWNTML 164
Query: 298 SAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHV------ 351
S YA NGC ++ RS +F +P + ++ W + A+V
Sbjct: 165 SGYAQNGCVDDA--------RS-----VFDRMPEKNDVS------WNALLSAYVQNSKME 205
Query: 352 -----IRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQ 406
++ ++ + N L+ + + AR+ FD + + VVSW+ +I +A +
Sbjct: 206 EACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGK 265
Query: 407 CLEALSLFIE---------MKLCGTRVDFIIVINILPTFAKIGALHYVRY---LHGYXXX 454
EA LF E + + +V F K+ + V + L GY
Sbjct: 266 IDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQG 325
Query: 455 XXXXXXX-----------XXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISA 503
+++ YA+CG I A+ LFD K +D ++W +MI+
Sbjct: 326 ERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFD--KMPKRDPVSWAAMIAG 383
Query: 504 YSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQP 563
YS+ G F+ L+ QM+ + ++ +F L+ C + ++ GK++ +V GY+
Sbjct: 384 YSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK-GGYET 442
Query: 564 SQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVA---- 619
++ + + G I+EA+ + + + D + +++ H EVA
Sbjct: 443 GCFVGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHG---FGEVALRFF 498
Query: 620 -AQKLINMEPKNAGNYVLLS 638
+ K ++P +A +LS
Sbjct: 499 ESMKREGLKPDDATMVAVLS 518
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 315 bits (806), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 202/681 (29%), Positives = 350/681 (51%), Gaps = 12/681 (1%)
Query: 24 QTRFFTTSSLLDLCTKP-QHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQ 79
Q F S+L C +HL ++H R G+ ++ + + L+ Y + G ++
Sbjct: 97 QISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAE 156
Query: 80 KVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVS 139
KVF D V +S ++ + + GE K L ++K MV+ + PD + V+ C +
Sbjct: 157 KVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELG 216
Query: 140 HEQ-GKMVHAQIVKLGMDAFDLVRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMIS 197
+ + VH QI + D + + NSL+ +Y K G L++ E ++ W MIS
Sbjct: 217 CLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMIS 276
Query: 198 QAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCG 257
E+ + FS M K I+PN +T+ ++L S + L++ G+++H + L
Sbjct: 277 SYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDP 336
Query: 258 EL-TVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCM 316
+++ AL+ +Y + G L D + + ++V WN ++S YA G ++L L M
Sbjct: 337 NYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQM 396
Query: 317 VRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGL 376
V ++PD FT +IS+ GKQ+H HVIR + V N+LIDMYS +
Sbjct: 397 VTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSV 455
Query: 377 NSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTF 436
+SA +F+ I ++VV+W++M+ + + +EA+SLF M ++ + + ++
Sbjct: 456 DSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQAC 515
Query: 437 AKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIA 496
+ IG+L +++H + +T+L+ YAKCG + A +F S +
Sbjct: 516 SSIGSLEKGKWVH-HKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWS 574
Query: 497 WNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMV 556
SMI+AY HG +NQM S KP++V F+ +L+AC +SG V++GK F M
Sbjct: 575 --SMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMK 632
Query: 557 DLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLA 616
+G P+ EH AC +DLL R+G + EA + I+ +P +DA V+G L++ C++H +
Sbjct: 633 S-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDII 691
Query: 617 EVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQ 676
+ L ++ + G Y LLSNIYA G+W++ ++RS ++ LKK PG S +E + +
Sbjct: 692 KAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQK 751
Query: 677 VHEFRVADQSHPRSVDIYSIL 697
V F +++ ++ +IY L
Sbjct: 752 VFRFGAGEENRIQTDEIYRFL 772
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 152/621 (24%), Positives = 312/621 (50%), Gaps = 27/621 (4%)
Query: 37 CTKPQHLQQIHARFFLHG-LHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSA 95
C+ + + Q+HA + G L ++ +KL++ Y G P S+ VF PDS +Y
Sbjct: 11 CSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGV 70
Query: 96 ILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ---GKMVHAQIVK 152
+++ + + LY +V ++ + VLR+C + S E G VH +I+K
Sbjct: 71 LIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRAC-AGSREHLSVGGKVHGRIIK 129
Query: 153 LGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQL 211
G+D ++ SL+ +Y + G L +A + +GM V +L W+ ++S E+G++ + ++
Sbjct: 130 GGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRM 189
Query: 212 FSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVK 271
F M + ++P+++T+I+++ +L L+I +++H I + T+ +LL+MY K
Sbjct: 190 FKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSK 249
Query: 272 LGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPA 331
G L + +FEK+ + + V W M+S+Y +++L M++SG+ P++ T
Sbjct: 250 CGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSV 309
Query: 332 ISSITQLKHTEWGKQMHAHVIRNGSD--YQVSVHNALIDMYSACNGLNSARRIFDLITDK 389
+SS + GK +H +R D Y+ S+ AL+++Y+ C L+ + +++D+
Sbjct: 310 LSSCGLIGLIREGKSVHGFAVRRELDPNYE-SLSLALVELYAECGKLSDCETVLRVVSDR 368
Query: 390 TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLH 449
+V+W+++I +A ++AL LF +M + D + + + G + + +H
Sbjct: 369 NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIH 428
Query: 450 GYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGE 509
G+ + SL+ Y+K G ++ A +F++ K H+ ++ WNSM+ +S++G
Sbjct: 429 GH-VIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIK--HRSVVTWNSMLCGFSQNGN 485
Query: 510 WFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMV-----DLYGYQPS 564
+ L++ M S ++ ++VTFL ++ AC + G ++KGK + +++ DL+
Sbjct: 486 SVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLF----- 540
Query: 565 QEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLI 624
++D+ + G ++ A + + S +++A MH R+ +
Sbjct: 541 --TDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWS-SMINAYGMHG--RIGSAISTFNQ 595
Query: 625 NMEPKNAGNYVLLSNIYAAAG 645
+E N V+ N+ +A G
Sbjct: 596 MVESGTKPNEVVFMNVLSACG 616
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 181/369 (49%), Gaps = 17/369 (4%)
Query: 230 LLRSTVDLHLLKIGQALHS-LIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRN 288
L RS L L+ LH+ L++ L + T L+ Y +GS +RL+FE P
Sbjct: 7 LFRSCSSLRLV---SQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 63
Query: 289 DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAI--SSITQLKHTEWGKQ 346
D ++ +++ +++L + +V + F P++ + +H G +
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFV-FPSVLRACAGSREHLSVGGK 122
Query: 347 MHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQ 406
+H +I+ G D + +L+ MY L+ A ++FD + + +V+WS ++ + + +
Sbjct: 123 VHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGE 182
Query: 407 CLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETS 466
++AL +F M G D + +I+++ A++G L R +HG S
Sbjct: 183 VVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNS 242
Query: 467 LLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQ-CFELYNQMKLSNV 525
LL Y+KCG + + ++F+ K + K+ ++W +MIS+Y++ GE+ + +++M S +
Sbjct: 243 LLTMYSKCGDLLSSERIFE--KIAKKNAVSWTAMISSYNR-GEFSEKALRSFSEMIKSGI 299
Query: 526 KPDQVTFLGLLTACVNSGLVDKGKEI--FKEMVDLYGYQPSQEHHA-CMVDLLGRAGQID 582
+P+ VT +L++C GL+ +GK + F +L P+ E + +V+L G++
Sbjct: 300 EPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRREL---DPNYESLSLALVELYAECGKLS 356
Query: 583 EASKIIETV 591
+ ++ V
Sbjct: 357 DCETVLRVV 365
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/507 (32%), Positives = 277/507 (54%), Gaps = 2/507 (0%)
Query: 192 WNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLII 251
+N++I+ + E LF +RK + + T +L++ K+G LHSL++
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 252 VSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLE 311
++ T+LLS+Y G L DA +F+++P +V W + S Y +G +E+++
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 312 LVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYS 371
L MV GV+PD + + +S+ + + G+ + ++ V L+++Y+
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYA 258
Query: 372 ACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVIN 431
C + AR +FD + +K +V+WS MI+ +A + E + LF++M + D ++
Sbjct: 259 KCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVG 318
Query: 432 ILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSH 491
L + A +GAL + +L+ YAKCG + ++F E K
Sbjct: 319 FLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKE-- 376
Query: 492 KDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEI 551
KDI+ N+ IS +K+G F ++ Q + + PD TFLGLL CV++GL+ G
Sbjct: 377 KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRF 436
Query: 552 FKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHS 611
F + +Y + + EH+ CMVDL GRAG +D+A ++I +P+ +A V+G LLS C++
Sbjct: 437 FNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVK 496
Query: 612 DPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWL 671
D +LAE ++LI +EP NAGNYV LSNIY+ G+WD+ A++R + +G+KK PG SW+
Sbjct: 497 DTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWI 556
Query: 672 ESNGQVHEFRVADQSHPRSVDIYSILK 698
E G+VHEF D+SHP S IY+ L+
Sbjct: 557 ELEGKVHEFLADDKSHPLSDKIYAKLE 583
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 197/417 (47%), Gaps = 6/417 (1%)
Query: 11 LNIRKIPYIVAPFQTRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYT 70
++I +P + Q +L+ + HL+QIH H LH ++ L + L+
Sbjct: 1 MSIVTVPSATSKVQQ----IKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTL 56
Query: 71 KFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSF 130
F S +F T+ P+ +Y++++ +TL L+ + + +Y +
Sbjct: 57 FFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPL 116
Query: 131 VLRSCFSVSHEQ-GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTE 188
VL++C S + G +H+ +VK G + SL+ +Y +G LN AH+ + +
Sbjct: 117 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS 176
Query: 189 LAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHS 248
+ W + S SG+ E LF +M + ++P+S ++ +L + V + L G+ +
Sbjct: 177 VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVK 236
Query: 249 LIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKE 308
+ + V T L+++Y K G ++ AR +F+ M D+V W+ M+ YA N PKE
Sbjct: 237 YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKE 296
Query: 309 SLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALID 368
+EL M++ ++PD F+ + +SS L + G+ + + R+ + + NALID
Sbjct: 297 GIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 356
Query: 369 MYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVD 425
MY+ C + +F + +K +V +A I A + + ++F + + G D
Sbjct: 357 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD 413
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 158/314 (50%), Gaps = 3/314 (0%)
Query: 276 KDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSI 335
K + L+F ++ ++N +++ + N E+L+L + + G+ FT + +
Sbjct: 62 KYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKAC 121
Query: 336 TQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWS 395
T+ + G +H+ V++ G ++ V+ +L+ +YS LN A ++FD I D++VV+W+
Sbjct: 122 TRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWT 181
Query: 396 AMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXX 455
A+ + + EA+ LF +M G + D ++ +L +G L ++ Y
Sbjct: 182 ALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEM 241
Query: 456 XXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFE 515
T+L+ YAKCG +E AR +FD KDI+ W++MI Y+ + + E
Sbjct: 242 EMQKNSFVRTTLVNLYAKCGKMEKARSVFDS--MVEKDIVTWSTMIQGYASNSFPKEGIE 299
Query: 516 LYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLL 575
L+ QM N+KPDQ + +G L++C + G +D G E ++D + + + ++D+
Sbjct: 300 LFLQMLQENLKPDQFSIVGFLSSCASLGALDLG-EWGISLIDRHEFLTNLFMANALIDMY 358
Query: 576 GRAGQIDEASKIIE 589
+ G + ++ +
Sbjct: 359 AKCGAMARGFEVFK 372
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 171/391 (43%), Gaps = 29/391 (7%)
Query: 28 FTTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
FT +L CT+ + +H+ G + + + + L+ Y+ G + K+F
Sbjct: 112 FTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDE 171
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQG 143
+ V ++A+ + G H + + L+K+MVE + PD VL +C V + G
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG 231
Query: 144 KMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFES 202
+ + + ++ M VR +LV LY K G + A + M ++ W+ MI +
Sbjct: 232 EWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASN 291
Query: 203 GKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN 262
+E +LF +M +EN++P+ +++ L S L L +G+ SLI L +
Sbjct: 292 SFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMA 351
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
AL+ MY K G++ +F++M D+V+ N +S A NG K S + + G+
Sbjct: 352 NALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGIS 411
Query: 323 PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDY------------QVSVHNALIDMY 370
PD T + + +HA +I++G + V + ++D++
Sbjct: 412 PDGSTFLGLLCGC-----------VHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLW 460
Query: 371 SACNGLNSARR-IFDLITDKTVVSWSAMIKA 400
L+ A R I D+ + W A++
Sbjct: 461 GRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 183/614 (29%), Positives = 318/614 (51%), Gaps = 73/614 (11%)
Query: 147 HAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAFESGKM 205
HA+I+K G + L+ Y N F +A L+ + + ++++I ++
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 206 EECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTAL 265
+ +FSRM + P+S + NL + +L K+G+ +H + VS L + V ++
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 266 LSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR--- 322
MY++ G + DAR +F++M D+V + ++ AYA GC +E + ++ M SG+
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 323 --------------------------------PDMFTAIPAISSITQLKHTEWGKQMHAH 350
PD T + S+ + G+ +H +
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 351 VIRNGSDYQVSVHNALIDMYS---------------------ACNG----------LNSA 379
VI+ G V +A+IDMY CN ++ A
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 380 RRIFDLITDKT----VVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPT 435
+F+L ++T VVSW+++I A + + +EAL LF EM++ G + + + + ++LP
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397
Query: 436 FAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDII 495
I AL + R HG+ ++L+ YAKCG I +++ +F+ + K+++
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT--KNLV 455
Query: 496 AWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEM 555
WNS+++ +S HG+ + ++ + + +KPD ++F LL+AC GL D+G + FK M
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 556 VDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRL 615
+ YG +P EH++CMV+LLGRAG++ EA +I+ +P D+ V+G LL++C++ ++ L
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 616 AEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNG 675
AE+AA+KL ++EP+N G YVLLSNIYAA G W +V +R+ + GLKK PGCSW++
Sbjct: 576 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
Query: 676 QVHEFRVADQSHPR 689
+V+ D+SHP+
Sbjct: 636 RVYTLLAGDKSHPQ 649
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 164/373 (43%), Gaps = 72/373 (19%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSA-------- 95
+QIH + GL ++ + + Y + G G ++KVF + D V SA
Sbjct: 136 KQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARK 195
Query: 96 ---------------------------ILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESC 128
IL ++ G H++ + +++++ PD+ +
Sbjct: 196 GCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTV 255
Query: 129 SFVLRSCF-SVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNG-------FLNAHEP 180
S VL S S G+++H ++K G+ V ++++++Y K+G N E
Sbjct: 256 SSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEM 315
Query: 181 LE---------GMSVTELA--------------------YWNNMISQAFESGKMEECFQL 211
+E G+S L W ++I+ ++GK E +L
Sbjct: 316 MEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALEL 375
Query: 212 FSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVK 271
F M+ ++PN +T+ ++L + ++ L G++ H + +L + V +AL+ MY K
Sbjct: 376 FREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAK 435
Query: 272 LGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPA 331
G + ++++F MP +LV WN +++ ++ +G KE + + ++R+ ++PD +
Sbjct: 436 CGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSL 495
Query: 332 ISSITQLKHTEWG 344
+S+ Q+ T+ G
Sbjct: 496 LSACGQVGLTDEG 508
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/474 (18%), Positives = 190/474 (40%), Gaps = 73/474 (15%)
Query: 241 KIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAY 300
K QA H+ I+ S + ++ L++ Y DA L+ + +P + ++ ++ A
Sbjct: 33 KTTQA-HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYAL 91
Query: 301 AGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQV 360
+S+ + M G+ PD +L + GKQ+H +G D
Sbjct: 92 TKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151
Query: 361 SVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLC 420
V ++ MY C + AR++FD ++DK VV+ SA++ A+A E + + EM+
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 421 GTRV-----------------------------------DFIIVINILPTFAKIGALHYV 445
G D + V ++LP+ L+
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 446 RYLHGYXXXXXXXXXXXXETSLLASYAKC------------------------------- 474
R +HGY ++++ Y K
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 475 GCIEMARKLFD--EGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTF 532
G ++ A ++F+ + ++ ++++W S+I+ +++G+ + EL+ +M+++ VKP+ VT
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 533 LGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVP 592
+L AC N + G+ V ++ A ++D+ + G+I+ + + +P
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSA-LIDMYAKCGRINLSQIVFNMMP 450
Query: 593 LNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGK 646
+ + L++ MH + + L M + +++ +++ +A G+
Sbjct: 451 -TKNLVCWNSLMNGFSMHGKAKEVMSIFESL--MRTRLKPDFISFTSLLSACGQ 501
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 312 bits (800), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 177/551 (32%), Positives = 293/551 (53%), Gaps = 36/551 (6%)
Query: 181 LEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENI---QPNSITVINLLRSTVDL 237
L+G+ + WN I ES +E F L+ +M + +P+ T L + DL
Sbjct: 110 LKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADL 169
Query: 238 HLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMV 297
L +G + ++ L V+ A + M+ G +++AR +F++ P DLV WN ++
Sbjct: 170 RLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLI 229
Query: 298 SAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSD 357
+ Y G ++++ + M GV+PD T I +SS + L GK+ + +V NG
Sbjct: 230 NGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLR 289
Query: 358 YQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHA----------VHDQC 407
+ + NAL+DM+S C ++ ARRIFD + +T+VSW+ MI +A + D
Sbjct: 290 MTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDM 349
Query: 408 LE---------------------ALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVR 446
E AL+LF EM+ T+ D I +I+ L +++GAL
Sbjct: 350 EEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI 409
Query: 447 YLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSK 506
++H Y TSL+ YAKCG I A +F ++ ++ + + ++I +
Sbjct: 410 WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT--RNSLTYTAIIGGLAL 467
Query: 507 HGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQE 566
HG+ +N+M + + PD++TF+GLL+AC + G++ G++ F +M + P +
Sbjct: 468 HGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLK 527
Query: 567 HHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINM 626
H++ MVDLLGRAG ++EA +++E++P+ +DA V+G LL C+MH + L E AA+KL+ +
Sbjct: 528 HYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLEL 587
Query: 627 EPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQS 686
+P ++G YVLL +Y A W+ + R + +RG++K PGCS +E NG V EF V D+S
Sbjct: 588 DPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKS 647
Query: 687 HPRSVDIYSIL 697
P S IY L
Sbjct: 648 RPESEKIYDRL 658
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/516 (22%), Positives = 223/516 (43%), Gaps = 40/516 (7%)
Query: 32 SLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMD--CYTKFGLPGLSQKVFYFTENPD 89
SLL+ C HL+QI A+ ++GL + SS+L+ ++ S K+ ENP+
Sbjct: 58 SLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPN 117
Query: 90 SVIYSAILRNLSQFGEHEKTLFLYKEMVEKSM---YPDEESCSFVLRSCFSVSHEQ-GKM 145
++ +R S+ +++ LYK+M+ PD + + + C + G M
Sbjct: 118 IFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHM 177
Query: 146 VHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGK 204
+ ++KL ++ V N+ + ++ G + NA + + V +L WN +I+ + G+
Sbjct: 178 ILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGE 237
Query: 205 MEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTA 264
E+ ++ M E ++P+ +T+I L+ S L L G+ + + + L + + A
Sbjct: 238 AEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNA 297
Query: 265 LLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGC------------------- 305
L+ M+ K G + +AR +F+ + + +V W M+S YA G
Sbjct: 298 LMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLW 357
Query: 306 ------------PKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIR 353
+++L L M S +PD T I +S+ +QL + G +H ++ +
Sbjct: 358 NAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK 417
Query: 354 NGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSL 413
V++ +L+DMY+ C ++ A +F I + ++++A+I A+H A+S
Sbjct: 418 YSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISY 477
Query: 414 FIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLAS-YA 472
F EM G D I I +L G + R S++
Sbjct: 478 FNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLG 537
Query: 473 KCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHG 508
+ G +E A +L E D W +++ HG
Sbjct: 538 RAGLLEEADRLM-ESMPMEADAAVWGALLFGCRMHG 572
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 123/273 (45%), Gaps = 7/273 (2%)
Query: 30 TSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLS-SKLMDCYTKFGLPGLSQKVFYFTENP 88
++L+D+ +K + + AR L + + +S + ++ Y + GL +S+K+F E
Sbjct: 295 VNALMDMFSKCGDIHE--ARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352
Query: 89 DSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVH 147
D V+++A++ Q + L L++EM + PDE + L +C + + G +H
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIH 412
Query: 148 AQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKME 206
I K + + SLV++Y K G ++ A G+ + +I G
Sbjct: 413 RYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAS 472
Query: 207 ECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVS-NLCGELTVNTAL 265
F+ M I P+ IT I LL + +++ G+ S + NL +L + +
Sbjct: 473 TAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIM 532
Query: 266 LSMYVKLGSLKDARLMFEKMP-RNDLVVWNIMV 297
+ + + G L++A + E MP D VW ++
Sbjct: 533 VDLLGRAGLLEEADRLMESMPMEADAAVWGALL 565
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 311 bits (797), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 176/577 (30%), Positives = 299/577 (51%), Gaps = 7/577 (1%)
Query: 126 ESCSFVLRSCFSVSHEQ-GKMVHAQIVK-LGMDAFDLVRNSLVELYEK-NGFLNAHEPLE 182
++ +L++ S S + G++VHA+IVK L + N L+ +Y K + +A L
Sbjct: 7 DALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLR 66
Query: 183 GMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKI 242
+ W ++IS ++G F MR+E + PN T ++ L L
Sbjct: 67 LTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVT 126
Query: 243 GQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAG 302
G+ +H+L + ++ V + MY K DAR +F+++P +L WN +S
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 186
Query: 303 NGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSV 362
+G P+E++E R P+ T +++ + H G Q+H V+R+G D VSV
Sbjct: 187 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 246
Query: 363 HNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGT 422
N LID Y C + S+ IF + K VSW +++ A+ + + +A L++ +
Sbjct: 247 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV 306
Query: 423 RVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARK 482
++ ++L A + L R +H + ++L+ Y KCGCIE + +
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 483 LFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQM--KLSNVKPDQVTFLGLLTACV 540
FDE K+++ NS+I Y+ G+ L+ +M + P+ +TF+ LL+AC
Sbjct: 367 AFDE--MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 424
Query: 541 NSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVY 600
+G V+ G +IF M YG +P EH++C+VD+LGRAG ++ A + I+ +P+ V+
Sbjct: 425 RAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVW 484
Query: 601 GPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDR 660
G L +AC+MH P+L +AA+ L ++PK++GN+VLLSN +AAAG+W + +R L+
Sbjct: 485 GALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGV 544
Query: 661 GLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
G+KK G SW+ QVH F+ D+SH + +I + L
Sbjct: 545 GIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTL 581
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 134/298 (44%), Gaps = 23/298 (7%)
Query: 29 TTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFT 85
T + L+ C+ HL Q+H G + S+ + L+D Y K S+ +F
Sbjct: 211 TFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM 270
Query: 86 ENPDSVIYSAILRNLSQFGEHEKTLFLY----KEMVEKSMYPDEESCSFVLRSCFSVSH- 140
++V + +++ Q E EK LY K++VE S + S VL +C ++
Sbjct: 271 GTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDF----MISSVLSACAGMAGL 326
Query: 141 EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQA 199
E G+ +HA VK ++ V ++LV++Y K G + ++ + + M L N++I
Sbjct: 327 ELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGY 386
Query: 200 FESGKMEECFQLFSRM--RKENIQPNSITVINLL----RSTVDLHLLKIGQALHSLIIVS 253
G+++ LF M R PN +T ++LL R+ + +KI ++ S +
Sbjct: 387 AHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIE 446
Query: 254 NLCGELTVNTALLSMYVKLGSLKDARLMFEKMP-RNDLVVWNIMVSAYAGNGCPKESL 310
+ ++ M + G ++ A +KMP + + VW + +A +G P+ L
Sbjct: 447 PGAEHY---SCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 310 bits (793), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 201/665 (30%), Positives = 342/665 (51%), Gaps = 48/665 (7%)
Query: 46 IHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGE 105
+H GL ++S L D Y K G+ + KVF + ++V ++A++ Q G+
Sbjct: 195 VHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGK 254
Query: 106 HEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-----EQGKMVHAQIVKLGMDAFDL 160
+E+ + L+ +M ++ + P + S +C S S E+GK HA + GM+ ++
Sbjct: 255 NEEAIRLFSDMRKQGVEPTRVTVS----TCLSASANMGGVEEGKQSHAIAIVNGMELDNI 310
Query: 161 VRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKEN 219
+ SL+ Y K G + A + M ++ WN +IS + G +E+ + MR E
Sbjct: 311 LGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEK 370
Query: 220 IQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDAR 279
++ + +T+ L+ + LK+G+ + I + ++ + + ++ MY K GS+ DA+
Sbjct: 371 LKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAK 430
Query: 280 LMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLK 339
+F+ DL++WN +++AYA +G E+L L Y M GV P++ T I S+
Sbjct: 431 KVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSL---- 486
Query: 340 HTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIK 399
+RNG + DM+ + S+ I +LI SW+ M+
Sbjct: 487 ------------LRNGQVDEAK------DMFLQ---MQSSGIIPNLI------SWTTMMN 519
Query: 400 AHAVHDQCLEALSLFI-EMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXX- 457
V + C E LF+ +M+ G R + + L A + +LH R +HGY
Sbjct: 520 G-MVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQH 578
Query: 458 XXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELY 517
ETSL+ YAKCG I A K+F G + ++ N+MISAY+ +G + LY
Sbjct: 579 SSLVSIETSLVDMYAKCGDINKAEKVF--GSKLYSELPLSNAMISAYALYGNLKEAIALY 636
Query: 518 NQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGR 577
++ +KPD +T +L+AC ++G +++ EIF ++V +P EH+ MVDLL
Sbjct: 637 RSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLAS 696
Query: 578 AGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLL 637
AG+ ++A ++IE +P DAR+ L+++C L + ++KL+ EP+N+GNYV +
Sbjct: 697 AGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTI 756
Query: 638 SNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQ--VHEFRVADQSHPRSVDIYS 695
SN YA G WD+V KMR ++ +GLKK PGCSW++ G+ VH F D++H R +I
Sbjct: 757 SNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQM 816
Query: 696 ILKVM 700
+L ++
Sbjct: 817 MLALL 821
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 125/258 (48%), Gaps = 8/258 (3%)
Query: 297 VSAYAGNGCPKESLELVYCMVRSGVR--PDMFTAIPAISSITQLKHTEWGKQMHAHVIRN 354
VS+ NG KE+L LV M +R P+++ I + + GKQ+HA +++N
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEI--LQGCVYERDLSTGKQIHARILKN 99
Query: 355 GSDYQVS--VHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALS 412
G Y + + L+ Y+ C+ L A +F + + V SW+A+I C AL
Sbjct: 100 GDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALM 159
Query: 413 LFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYA 472
F+EM D +V N+ + + R +HGY +SL Y
Sbjct: 160 GFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYG 219
Query: 473 KCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTF 532
KCG ++ A K+FDE ++ +AWN+++ Y ++G+ + L++ M+ V+P +VT
Sbjct: 220 KCGVLDDASKVFDE--IPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTV 277
Query: 533 LGLLTACVNSGLVDKGKE 550
L+A N G V++GK+
Sbjct: 278 STCLSASANMGGVEEGKQ 295
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 308 bits (789), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 198/687 (28%), Positives = 350/687 (50%), Gaps = 26/687 (3%)
Query: 21 APFQTRFFT-TSSLLDLCTKPQHLQQ--------IHARFFLHGLHQNSSLSSKLMDCYTK 71
+ FQT TS+LL T H QQ +H + G ++ L++ Y K
Sbjct: 4 STFQTELNPHTSTLLKKLT--HHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAK 61
Query: 72 FGLPGLSQKVFYFTENPDSVIYSAILRNLSQFG---EHEKTLFLYKEMVEKSMYPDEESC 128
G + +F D V +++++ SQ G + L++EM + + P+ +
Sbjct: 62 CGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTL 121
Query: 129 SFVLRSCFSV-SHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSV 186
+ + ++ S+ S G+ HA +VK+ V SLV +Y K G + + + M
Sbjct: 122 AGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPE 181
Query: 187 TELAYWNNMISQAFESGKMEEC---FQLFSRMRKENIQPNSI--TVINLLRSTVDLHLLK 241
W+ M+S G++EE F LF R ++E + + V++ L +T+ +
Sbjct: 182 RNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATI---YVG 238
Query: 242 IGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYA 301
+G+ +H + I + L G + ++ AL++MY K SL +A MF+ + + W+ MV+ Y+
Sbjct: 239 LGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYS 298
Query: 302 GNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVS 361
NG E+++L M +G++P +T + +++ + + + E GKQ+H+ +++ G + +
Sbjct: 299 QNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLF 358
Query: 362 VHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCG 421
AL+DMY+ L AR+ FD + ++ V W+++I + + EAL L+ MK G
Sbjct: 359 ATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAG 418
Query: 422 TRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMAR 481
+ + ++L + + L + +HG+ ++L Y+KCG +E
Sbjct: 419 IIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGN 478
Query: 482 KLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVN 541
+F ++ +KD+++WN+MIS S +G+ + EL+ +M ++PD VTF+ +++AC +
Sbjct: 479 LVFR--RTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSH 536
Query: 542 SGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYG 601
G V++G F M D G P +H+ACMVDLL RAGQ+ EA + IE+ ++ ++
Sbjct: 537 KGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWR 596
Query: 602 PLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRG 661
LLSACK H L A +KL+ + + + YV LS IY A G+ V ++ +R G
Sbjct: 597 ILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANG 656
Query: 662 LKKTPGCSWLESNGQVHEFRVADQSHP 688
+ K GCSW+E Q H F V D HP
Sbjct: 657 VSKEVGCSWIELKNQYHVFVVGDTMHP 683
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 306 bits (784), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 191/652 (29%), Positives = 337/652 (51%), Gaps = 17/652 (2%)
Query: 46 IHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGE 105
+H GL ++ + + L+ Y G + ++F + V +++++R S G
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 106 HEKTLFLYKEMVEK----SMYPDEESCSFVLRSCFSVSHEQ----GKMVHAQIVKLGMDA 157
E++ L EM+E+ + PD + VL C + E+ GK VH VKL +D
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC---AREREIGLGKGVHGWAVKLRLDK 325
Query: 158 FDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRM- 215
++ N+L+++Y K G + NA + + + WN M+ G F + +M
Sbjct: 326 ELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385
Query: 216 -RKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGS 274
E+++ + +T++N + L + LH + V A ++ Y K GS
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445
Query: 275 LKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISS 334
L A+ +F + + WN ++ +A + P+ SL+ M SG+ PD FT +S+
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Query: 335 ITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSW 394
++LK GK++H +IRN + + V+ +++ +Y C L + + +FD + DK++VSW
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565
Query: 395 SAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXX 454
+ +I + + AL +F +M L G ++ I ++ + + + +L R H Y
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK 625
Query: 455 XXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCF 514
SL+ YAK G I + K+F+ K K +WN+MI Y HG +
Sbjct: 626 HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK--EKSTASWNAMIMGYGIHGLAKEAI 683
Query: 515 ELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDL 574
+L+ +M+ + PD +TFLG+LTAC +SGL+ +G +M +G +P+ +H+AC++D+
Sbjct: 684 KLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDM 743
Query: 575 LGRAGQIDEASKII-ETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGN 633
LGRAGQ+D+A +++ E + +D ++ LLS+C++H + + E A KL +EP+ N
Sbjct: 744 LGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPEN 803
Query: 634 YVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQ 685
YVLLSN+YA GKW+ V K+R + + L+K GCSW+E N +V F V ++
Sbjct: 804 YVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGER 855
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 124/519 (23%), Positives = 237/519 (45%), Gaps = 14/519 (2%)
Query: 21 APFQTRFFTTSSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGL 77
F T ++L +C + + + + +H L + L++ LMD Y+K G
Sbjct: 286 GAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITN 345
Query: 78 SQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVE--KSMYPDEESCSFVLRSC 135
+Q +F N + V ++ ++ S G+ T + ++M+ + + DE + + C
Sbjct: 346 AQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405
Query: 136 FSVSHEQG-KMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWN 193
F S K +H +K +LV N+ V Y K G L+ A G+ + WN
Sbjct: 406 FHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWN 465
Query: 194 NMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVS 253
+I +S +M+ + P+S TV +LL + L L++G+ +H II +
Sbjct: 466 ALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN 525
Query: 254 NLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELV 313
L +L V ++LS+Y+ G L + +F+ M LV WN +++ Y NG P +L +
Sbjct: 526 WLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVF 585
Query: 314 YCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSAC 373
MV G++ + +P + + L G++ HA+ +++ + + +LIDMY+
Sbjct: 586 RQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKN 645
Query: 374 NGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINIL 433
+ + ++F+ + +K+ SW+AMI + +H EA+ LF EM+ G D + + +L
Sbjct: 646 GSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVL 705
Query: 434 PTFAKIGALHY-VRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHK 492
G +H +RYL ++ + G ++ A ++ E S
Sbjct: 706 TACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEA 765
Query: 493 DIIAWNSMISAYSKHGEWFQCFELYNQM--KLSNVKPDQ 529
D+ W S++S+ H Q E+ ++ KL ++P++
Sbjct: 766 DVGIWKSLLSSCRIH----QNLEMGEKVAAKLFELEPEK 800
Score = 157 bits (396), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 183/378 (48%), Gaps = 9/378 (2%)
Query: 181 LEGMSVTELAYWNNMISQAFESGKMEECFQLFSRM-RKENIQPNSITVINLLRSTVDLHL 239
+ + L WN +IS + +E + F M ++ P+ T ++++ +
Sbjct: 143 FDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSD 202
Query: 240 LKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSA 299
+ IG A+H L++ + L ++ V AL+S Y G + DA +F+ MP +LV WN M+
Sbjct: 203 VGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRV 262
Query: 300 YAGNGCPKESLELVYCMVR----SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNG 355
++ NG +ES L+ M+ PD+ T + + + + GK +H ++
Sbjct: 263 FSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLR 322
Query: 356 SDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFI 415
D ++ ++NAL+DMYS C + +A+ IF + +K VVSW+ M+ + +
Sbjct: 323 LDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLR 382
Query: 416 EMKLCG--TRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAK 473
+M G + D + ++N +P L ++ LH Y + +ASYAK
Sbjct: 383 QMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAK 442
Query: 474 CGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFL 533
CG + A+++F +S K + +WN++I +++ + + + QMK+S + PD T
Sbjct: 443 CGSLSYAQRVFHGIRS--KTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 500
Query: 534 GLLTACVNSGLVDKGKEI 551
LL+AC + GKE+
Sbjct: 501 SLLSACSKLKSLRLGKEV 518
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 304 bits (778), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 176/584 (30%), Positives = 311/584 (53%), Gaps = 16/584 (2%)
Query: 127 SCSFVLRSCFS-VSHEQGKMVHAQIVKLG-MDAFDLVRNSLVELYEKNGFLNAHEPLEGM 184
+C L+ C + G+ +H +V+ G +D SLV +Y K G + + G
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG 121
Query: 185 SVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQ 244
S ++ +N +IS +G + + + MR I P+ T +LL+ + + L + +
Sbjct: 122 SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-K 180
Query: 245 ALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMP-RNDLVVWNIMVSAYAGN 303
+H L + V + L++ Y K S++DA+ +F+++P R+D V+WN +V+ Y+
Sbjct: 181 KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQI 240
Query: 304 GCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVH 363
+++L + M GV T +S+ T + G+ +H ++ GS + V
Sbjct: 241 FRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVS 300
Query: 364 NALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLE---ALSLFIEMKLC 420
NALIDMY L A IF+ + ++ + +W++++ VHD C + L+LF M
Sbjct: 301 NALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVL---CVHDYCGDHDGTLALFERMLCS 357
Query: 421 GTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXE----TSLLASYAKCGC 476
G R D + + +LPT ++ +L R +HGY SL+ Y KCG
Sbjct: 358 GIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGD 417
Query: 477 IEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLL 536
+ AR +FD + KD +WN MI+ Y ++++ M + VKPD++TF+GLL
Sbjct: 418 LRDARMVFDSMRV--KDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLL 475
Query: 537 TACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSD 596
AC +SG +++G+ +M +Y P+ +H+AC++D+LGRA +++EA ++ + P+ +
Sbjct: 476 QACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDN 535
Query: 597 ARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSF 656
V+ +LS+C++H + LA VA ++L +EP++ G YVL+SN+Y AGK+++V +R
Sbjct: 536 PVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDA 595
Query: 657 LRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILKVM 700
+R + +KKTPGCSW+ VH F +Q+HP I+ L ++
Sbjct: 596 MRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLV 639
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 187/373 (50%), Gaps = 13/373 (3%)
Query: 43 LQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVF-YFTENPDSVIYSAILRNLS 101
++++H F G + + S L+ Y+KF +QKVF + DSV+++A++ S
Sbjct: 179 VKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYS 238
Query: 102 QFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH--EQGKMVHAQIVKLGMDAFD 159
Q E L ++ +M E+ + + + VL S F+VS + G+ +H VK G +
Sbjct: 239 QIFRFEDALLVFSKMREEGVGVSRHTITSVL-SAFTVSGDIDNGRSIHGLAVKTGSGSDI 297
Query: 160 LVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKE 218
+V N+L+++Y K+ +L A+ E M +L WN+++ G + LF RM
Sbjct: 298 VVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCS 357
Query: 219 NIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN----TALLSMYVKLGS 274
I+P+ +T+ +L + L L+ G+ +H +IVS L + N +L+ MYVK G
Sbjct: 358 GIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGD 417
Query: 275 LKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISS 334
L+DAR++F+ M D WNIM++ Y C + +L++ CM R+GV+PD T + + +
Sbjct: 418 LRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQA 477
Query: 335 ITQLKHTEWGKQMHAHVIRNGSDYQVSVHNA-LIDMYSACNGLNSARR--IFDLITDKTV 391
+ G+ A + + S H A +IDM + L A I I D V
Sbjct: 478 CSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPV 537
Query: 392 VSWSAMIKAHAVH 404
V W +++ + +H
Sbjct: 538 V-WRSILSSCRLH 549
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 154/465 (33%), Positives = 262/465 (56%), Gaps = 3/465 (0%)
Query: 229 NLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRN 288
LL+ LL G+ +H+ I+ S ++ + LL+MY K GSL++AR +FEKMP+
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 289 DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMH 348
D V W ++S Y+ + P ++L M+R G P+ FT I + + G Q+H
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 349 AHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCL 408
++ G D V V +AL+D+Y+ ++ A+ +FD + + VSW+A+I HA
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 409 EALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLL 468
+AL LF M G R ++ + G L +++H Y +LL
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLL 304
Query: 469 ASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPD 528
YAK G I ARK+FD + + +D+++WNS+++AY++HG + + +M+ ++P+
Sbjct: 305 DMYAKSGSIHDARKIFD--RLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 529 QVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKII 588
+++FL +LTAC +SGL+D+G + E++ G P H+ +VDLLGRAG ++ A + I
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYY-ELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 589 ETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWD 648
E +P+ A ++ LL+AC+MH + L AA+ + ++P + G +V+L NIYA+ G+W+
Sbjct: 422 EEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWN 481
Query: 649 KVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDI 693
A++R +++ G+KK P CSW+E +H F D+ HP+ +I
Sbjct: 482 DAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEI 526
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 154/302 (50%), Gaps = 1/302 (0%)
Query: 142 QGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAF 200
QG++VHA I++ ++ N+L+ +Y K G L A + E M + W +IS
Sbjct: 78 QGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYS 137
Query: 201 ESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELT 260
+ + + F++M + PN T+ +++++ G LH + +
Sbjct: 138 QHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 261 VNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG 320
V +ALL +Y + G + DA+L+F+ + + V WN +++ +A +++LEL M+R G
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 321 VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSAR 380
RP F+ + + E GK +HA++I++G N L+DMY+ ++ AR
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317
Query: 381 RIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIG 440
+IFD + + VVSW++++ A+A H EA+ F EM+ G R + I +++L + G
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
Query: 441 AL 442
L
Sbjct: 378 LL 379
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 181/389 (46%), Gaps = 8/389 (2%)
Query: 22 PFQTRFFTTSSLLDLCTKPQHLQQ---IHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLS 78
P RF+ T LL CT + L Q +HA + + + L++ Y K G +
Sbjct: 57 PADRRFYNT--LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEA 114
Query: 79 QKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSV 138
+KVF D V ++ ++ SQ L + +M+ P+E + S V+++ +
Sbjct: 115 RKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAE 174
Query: 139 SHEQ-GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMI 196
G +H VK G D+ V ++L++LY + G ++ A + + WN +I
Sbjct: 175 RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI 234
Query: 197 SQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLC 256
+ E+ +LF M ++ +P+ + +L + L+ G+ +H+ +I S
Sbjct: 235 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294
Query: 257 GELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCM 316
LL MY K GS+ DAR +F+++ + D+V WN +++AYA +G KE++ M
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 317 VRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGL 376
R G+RP+ + + +++ + + G + + ++G + + ++D+ L
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDL 414
Query: 377 NSARR-IFDLITDKTVVSWSAMIKAHAVH 404
N A R I ++ + T W A++ A +H
Sbjct: 415 NRALRFIEEMPIEPTAAIWKALLNACRMH 443
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 194/666 (29%), Positives = 343/666 (51%), Gaps = 21/666 (3%)
Query: 45 QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFG 104
QIH G +S+ +M Y K G + +F +PD V ++ IL S F
Sbjct: 97 QIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTIL---SGFD 153
Query: 105 EHEKTLFLYKEMVEKSMYPDEESCSFVLRSCF-SVSHEQGKMVHAQIVKLGMDAFDLVRN 163
+++ L M + D + S L C S G + + +VK G+++ +V N
Sbjct: 154 DNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGN 213
Query: 164 SLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFESGKME-ECFQLFSRMRKENIQ 221
S + +Y ++G F A + MS ++ WN+++S + G E +F M +E ++
Sbjct: 214 SFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVE 273
Query: 222 PNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLM 281
+ ++ +++ + LK+ + +H L I L V L+S Y K G L+ + +
Sbjct: 274 LDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSV 333
Query: 282 FEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHT 341
F +M ++V W M+S+ +++ + M GV P+ T + I+++ +
Sbjct: 334 FHQMSERNVVSWTTMISSN-----KDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQI 388
Query: 342 EWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAH 401
+ G ++H I+ G + SV N+ I +Y+ L A++ F+ IT + ++SW+AMI
Sbjct: 389 KEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGF 448
Query: 402 AVHDQCLEALSLFIEM--KLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXX 459
A + EAL +F+ + F V+N + FA+ ++ + H +
Sbjct: 449 AQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIA-FAEDISVKQGQRCHAHLLKLGLNS 507
Query: 460 XXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQ 519
++LL YAK G I+ + K+F+E S K+ W S+ISAYS HG++ L+++
Sbjct: 508 CPVVSSALLDMYAKRGNIDESEKVFNE--MSQKNQFVWTSIISAYSSHGDFETVMNLFHK 565
Query: 520 MKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAG 579
M NV PD VTFL +LTAC G+VDKG EIF M+++Y +PS EH++CMVD+LGRAG
Sbjct: 566 MIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAG 625
Query: 580 QIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSN 639
++ EA +++ VP + +L +C++H + ++ A+ + M+P+ +G+YV + N
Sbjct: 626 RLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYN 685
Query: 640 IYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWL-----ESNGQVHEFRVADQSHPRSVDIY 694
IYA +WDK A++R +R + + K G SW+ E + + F D+SHP+S +IY
Sbjct: 686 IYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIY 745
Query: 695 SILKVM 700
+++++
Sbjct: 746 RMVEII 751
Score = 149 bits (377), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 122/515 (23%), Positives = 243/515 (47%), Gaps = 27/515 (5%)
Query: 108 KTLFLYKEMVEKSMYP---DEESCSFVLRSCFSVSHEQGKMVHAQIVKLGMDAFDLVRNS 164
+ L ++KE ++ + DE + L++C ++G +H G +F V N+
Sbjct: 58 RALSIFKENLQLGYFGRHMDEVTLCLALKACRG-DLKRGCQIHGFSTTSGFTSFVCVSNA 116
Query: 165 LVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPN 223
++ +Y K G F NA E + ++ WN ++S F+ ++ F + RM+ + +
Sbjct: 117 VMGMYRKAGRFDNALCIFENLVDPDVVSWNTILS-GFDDNQIALNFVV--RMKSAGVVFD 173
Query: 224 SITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFE 283
+ T L V +G L S ++ + L +L V + ++MY + GS + AR +F+
Sbjct: 174 AFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFD 233
Query: 284 KMPRNDLVVWNIMVSAYAGNGCPK-ESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTE 342
+M D++ WN ++S + G E++ + M+R GV D + I++ +
Sbjct: 234 EMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLK 293
Query: 343 WGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHA 402
+Q+H I+ G + + V N L+ YS C L + + +F ++++ VVSW+ MI ++
Sbjct: 294 LARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK 353
Query: 403 VHDQCLEALSLFIEMKLCG---TRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXX 459
+A+S+F+ M+ G V F+ +IN + +I +HG
Sbjct: 354 D-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQI---KEGLKIHGLCIKTGFVS 405
Query: 460 XXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQ 519
S + YAK +E A+K F++ + ++II+WN+MIS ++++G + +++
Sbjct: 406 EPSVGNSFITLYAKFEALEDAKKAFED--ITFREIISWNAMISGFAQNGFSHEALKMFLS 463
Query: 520 MKLSNVKPDQVTFLGLLTACVNSG--LVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGR 577
+ P++ TF +L A + V +G+ ++ L G + ++D+ +
Sbjct: 464 AA-AETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKL-GLNSCPVVSSALLDMYAK 521
Query: 578 AGQIDEASKIIETVPLNSDARVYGPLLSACKMHSD 612
G IDE+ K+ + + V+ ++SA H D
Sbjct: 522 RGNIDESEKVFNEMS-QKNQFVWTSIISAYSSHGD 555
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 154/330 (46%), Gaps = 15/330 (4%)
Query: 31 SSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTEN 87
+S++ C L+ QIH G + + LM Y+K G+ + VF+
Sbjct: 280 TSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSE 339
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMV 146
+ V ++ ++ + + + ++ M +YP+E + ++ + ++G +
Sbjct: 340 RNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKI 394
Query: 147 HAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAFESGKM 205
H +K G + V NS + LY K +A + E ++ E+ WN MIS ++G
Sbjct: 395 HGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFS 454
Query: 206 EECFQLFSRMRKENIQPNSIT---VINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN 262
E ++F E + PN T V+N + D+ +K GQ H+ ++ L V+
Sbjct: 455 HEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDIS-VKQGQRCHAHLLKLGLNSCPVVS 512
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
+ALL MY K G++ ++ +F +M + + VW ++SAY+ +G + + L + M++ V
Sbjct: 513 SALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVA 572
Query: 323 PDMFTAIPAISSITQLKHTEWGKQMHAHVI 352
PD+ T + +++ + + G ++ +I
Sbjct: 573 PDLVTFLSVLTACNRKGMVDKGYEIFNMMI 602
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 181/626 (28%), Positives = 321/626 (51%), Gaps = 6/626 (0%)
Query: 78 SQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEM--VEKSMYPDEESCSFVLRSC 135
+++VF + D V +++I++ ++ L L+ M V+ ++ PD S VL++C
Sbjct: 59 ARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKAC 118
Query: 136 FSVSH-EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAH-EPLEGMSVTELAYWN 193
S+ G+ +HA VK + + V +SL+++Y++ G ++ M W
Sbjct: 119 GQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWT 178
Query: 194 NMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVS 253
+I+ +G+ +E FS M + ++ T L++ L +K G+A+H+ +IV
Sbjct: 179 AIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVR 238
Query: 254 NLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELV 313
L V +L +MY + G ++D +FE M D+V W ++ AY G +++E
Sbjct: 239 GFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETF 298
Query: 314 YCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSAC 373
M S V P+ T S+ L WG+Q+H +V+ G + +SV N+++ MYS C
Sbjct: 299 IKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTC 358
Query: 374 NGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINIL 433
L SA +F + + ++SWS +I + E F M+ GT+ + ++L
Sbjct: 359 GNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLL 418
Query: 434 PTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKD 493
+ + R +H +SL+ Y+KCG I+ A +F G++ D
Sbjct: 419 SVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIF--GETDRDD 476
Query: 494 IIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFK 553
I++ +MI+ Y++HG+ + +L+ + +PD VTF+ +LTAC +SG +D G F
Sbjct: 477 IVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFN 536
Query: 554 EMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDP 613
M + Y +P++EH+ CMVDLL RAG++ +A K+I + D V+ LL ACK D
Sbjct: 537 MMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDI 596
Query: 614 RLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLES 673
AA++++ ++P A V L+NIY++ G ++ A +R ++ +G+ K PG S ++
Sbjct: 597 ERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKI 656
Query: 674 NGQVHEFRVADQSHPRSVDIYSILKV 699
V F D+ HP+S DIY+IL++
Sbjct: 657 KDCVSAFVSGDRFHPQSEDIYNILEL 682
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/506 (24%), Positives = 225/506 (44%), Gaps = 16/506 (3%)
Query: 13 IRKIPYIVAPFQTRFFTTSSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCY 69
+R + + V+P + S +L C + ++ + +HA L + + S L+D Y
Sbjct: 97 MRVVDHAVSPDTS---VLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMY 153
Query: 70 TKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCS 129
+ G S +VF ++V ++AI+ L G +++ L + EM D + +
Sbjct: 154 KRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFA 213
Query: 130 FVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL-EGMSVT 187
L++C + + GK +H ++ G V NSL +Y + G + L E MS
Sbjct: 214 IALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSER 273
Query: 188 ELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALH 247
++ W ++I G+ + + F +MR + PN T ++ + L L G+ LH
Sbjct: 274 DVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLH 333
Query: 248 SLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPK 307
++ L L+V+ +++ MY G+L A ++F+ M D++ W+ ++ Y G +
Sbjct: 334 CNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGE 393
Query: 308 ESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALI 367
E + M +SG +P F +S + E G+Q+HA + G + +V ++LI
Sbjct: 394 EGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLI 453
Query: 368 DMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFI 427
+MYS C + A IF +VS +AMI +A H + EA+ LF + G R D +
Sbjct: 454 NMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSV 513
Query: 428 IVINILPTFAKIGAL----HYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKL 483
I++L G L HY + LL + G + A K+
Sbjct: 514 TFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLL---CRAGRLSDAEKM 570
Query: 484 FDEGKSSHKDIIAWNSMISAYSKHGE 509
+E S KD + W +++ A G+
Sbjct: 571 INE-MSWKKDDVVWTTLLIACKAKGD 595
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 168/373 (45%), Gaps = 15/373 (4%)
Query: 219 NIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDA 278
IQ T I+LL+ V+ ++++I + + N+ L S+ + G+L+ A
Sbjct: 10 TIQRFCTTSISLLQKPVEENIVRISNQVMV---------KFDPNSHLRSL-INAGNLRAA 59
Query: 279 RLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCM--VRSGVRPDMFTAIPAISSIT 336
R +F+KMP D+V W ++ Y E+L L M V V PD + +
Sbjct: 60 RQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACG 119
Query: 337 QLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSA 396
Q + +G+ +HA+ ++ V V ++L+DMY ++ + R+F + + V+W+A
Sbjct: 120 QSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTA 179
Query: 397 MIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXX 456
+I + E L+ F EM D L A + + Y + +H +
Sbjct: 180 IITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRG 239
Query: 457 XXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFEL 516
SL Y +CG ++ LF+ S +D+++W S+I AY + G+ + E
Sbjct: 240 FVTTLCVANSLATMYTECGEMQDGLCLFE--NMSERDVVSWTSLIVAYKRIGQEVKAVET 297
Query: 517 YNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLG 576
+ +M+ S V P++ TF + +AC + + G+++ ++ L G S M+ +
Sbjct: 298 FIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSL-GLNDSLSVSNSMMKMYS 356
Query: 577 RAGQIDEASKIIE 589
G + AS + +
Sbjct: 357 TCGNLVSASVLFQ 369
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 173/569 (30%), Positives = 301/569 (52%), Gaps = 8/569 (1%)
Query: 133 RSCFSVSHEQGKMVHAQIVKLGMDAFD-LVRNSLVELY-EKNGFLNAHEPLEGMSVTELA 190
R S+SH G+++H ++ ++G++ L++N ++++Y E +A + + MS
Sbjct: 94 RELRSLSH--GRLLHDRM-RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAV 150
Query: 191 YWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLI 250
MIS E G +++ LFS M +P S LL+S V+ L G+ +H+ +
Sbjct: 151 SRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHV 210
Query: 251 IVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESL 310
I + LC ++ T +++MYVK G L A+ +F++M V ++ Y G +++L
Sbjct: 211 IRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDAL 270
Query: 311 ELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMY 370
+L +V GV D F + + L+ GKQ+HA V + G + +VSV L+D Y
Sbjct: 271 KLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFY 330
Query: 371 SACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRV-DFIIV 429
C+ SA R F I + VSWSA+I + Q EA+ F ++ + +
Sbjct: 331 IKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTY 390
Query: 430 INILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKS 489
+I + + + +H E++L+ Y+KCGC++ A ++F+
Sbjct: 391 TSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFE--SM 448
Query: 490 SHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGK 549
+ DI+AW + IS ++ +G + L+ +M +KP+ VTF+ +LTAC ++GLV++GK
Sbjct: 449 DNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK 508
Query: 550 EIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKM 609
M+ Y P+ +H+ CM+D+ R+G +DEA K ++ +P DA + LS C
Sbjct: 509 HCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWT 568
Query: 610 HSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCS 669
H + L E+A ++L ++P++ YVL N+Y AGKW++ A+M + +R LKK CS
Sbjct: 569 HKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCS 628
Query: 670 WLESNGQVHEFRVADQSHPRSVDIYSILK 698
W++ G++H F V D+ HP++ +IY LK
Sbjct: 629 WIQEKGKIHRFIVGDKHHPQTQEIYEKLK 657
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 210/449 (46%), Gaps = 16/449 (3%)
Query: 204 KMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNT 263
K+ E F+ M K + +S + L + +L L G+ LH + + + +
Sbjct: 63 KLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQN 122
Query: 264 ALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRP 323
+L MY + SL+DA +F++M + V M+SAYA G +++ L M+ SG +P
Sbjct: 123 CVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKP 182
Query: 324 --DMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARR 381
M+T + + S+ + ++G+Q+HAHVIR G S+ +++MY C L A+R
Sbjct: 183 PSSMYTTL--LKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKR 240
Query: 382 IFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGA 441
+FD + K V+ + ++ + + +AL LF+++ G D + +L A +
Sbjct: 241 VFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEE 300
Query: 442 LHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMI 501
L+ + +H T L+ Y KC E A + F E + + ++W+++I
Sbjct: 301 LNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPND--VSWSAII 358
Query: 502 SAYSKHGEWFQCFELYNQMKLSNVKP-DQVTFLGLLTACVNSGLVDKGKEIFKEMV--DL 558
S Y + ++ + + + ++ N + T+ + AC + G ++ + + L
Sbjct: 359 SGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSL 418
Query: 559 YGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEV 618
G SQ + ++ + + G +D+A+++ E++ N D + +S + + A
Sbjct: 419 IG---SQYGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGNASEALR 474
Query: 619 AAQKLIN--MEPKNAGNYVLLSNIYAAAG 645
+K+++ M+P N+ ++ + + AG
Sbjct: 475 LFEKMVSCGMKP-NSVTFIAVLTACSHAG 502
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 181/385 (47%), Gaps = 14/385 (3%)
Query: 31 SSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTEN 87
++LL P+ L +QIHA GL N+S+ + +++ Y K G +++VF
Sbjct: 188 TTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAV 247
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMV 146
V + ++ +Q G L L+ ++V + + D S VL++C S+ GK +
Sbjct: 248 KKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQI 307
Query: 147 HAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAFESGKM 205
HA + KLG+++ V LV+ Y K + F +A + + W+ +IS + +
Sbjct: 308 HACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQF 367
Query: 206 EECFQLFSRMRKENIQP-NSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTA 264
EE + F +R +N NS T ++ ++ L IG +H+ I +L G +A
Sbjct: 368 EEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESA 427
Query: 265 LLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPD 324
L++MY K G L DA +FE M D+V W +S +A G E+L L MV G++P+
Sbjct: 428 LITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPN 487
Query: 325 MFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSV----HNALIDMYSACNGLNSAR 380
T I +++ + E GK ++R Y V+ ++ +ID+Y+ L+ A
Sbjct: 488 SVTFIAVLTACSHAGLVEQGKHCLDTMLRK---YNVAPTIDHYDCMIDIYARSGLLDEAL 544
Query: 381 RIF-DLITDKTVVSWSAMIKAHAVH 404
+ ++ + +SW + H
Sbjct: 545 KFMKNMPFEPDAMSWKCFLSGCWTH 569
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 2/153 (1%)
Query: 404 HDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXX 463
H + EA EM G V + ++ +L + R LH
Sbjct: 61 HRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLL 120
Query: 464 ETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLS 523
+ +L Y +C +E A KLFDE S + ++ +MISAY++ G + L++ M S
Sbjct: 121 QNCVLQMYCECRSLEDADKLFDE--MSELNAVSRTTMISAYAEQGILDKAVGLFSGMLAS 178
Query: 524 NVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMV 556
KP + LL + VN +D G++I ++
Sbjct: 179 GDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVI 211
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Query: 28 FTTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
FT +S+ C+ Q+HA L + S L+ Y+K G + +VF
Sbjct: 388 FTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFES 447
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH---- 140
+NPD V ++A + + +G + L L+++MV M P+ + VL +C SH
Sbjct: 448 MDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTAC---SHAGLV 504
Query: 141 EQGK-----MVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN 176
EQGK M+ V +D +D ++++Y ++G L+
Sbjct: 505 EQGKHCLDTMLRKYNVAPTIDHYD----CMIDIYARSGLLD 541
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 175/511 (34%), Positives = 273/511 (53%), Gaps = 41/511 (8%)
Query: 193 NNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIV 252
N MI +G E ++F M N++P+ T +L++ + IG+ +H
Sbjct: 109 NVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK 168
Query: 253 SNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLEL 312
L L V L+SMY K G L +ARL+ ++M R D+V WN +V YA N ++LE+
Sbjct: 169 VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEV 228
Query: 313 VYCMVRSGVRPD---MFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDM 369
M + D M + +PA+S+ T N M
Sbjct: 229 CREMESVKISHDAGTMASLLPAVSNTT-------------------------TENV---M 260
Query: 370 YSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIV 429
Y + +F + K++VSW+ MI + + +EA+ L+ M+ G D + +
Sbjct: 261 Y--------VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSI 312
Query: 430 INILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKS 489
++LP AL + +HGY E +L+ YAKCGC+E AR +F+ KS
Sbjct: 313 TSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKS 372
Query: 490 SHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGK 549
+D+++W +MISAY G L+++++ S + PD + F+ L AC ++GL+++G+
Sbjct: 373 --RDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGR 430
Query: 550 EIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKM 609
FK M D Y P EH ACMVDLLGRAG++ EA + I+ + + + RV+G LL AC++
Sbjct: 431 SCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRV 490
Query: 610 HSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCS 669
HSD + +AA KL + P+ +G YVLLSNIYA AG+W++V +R+ ++ +GLKK PG S
Sbjct: 491 HSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 550
Query: 670 WLESNGQVHEFRVADQSHPRSVDIYSILKVM 700
+E N +H F V D+SHP+S +IY L V+
Sbjct: 551 NVEVNRIIHTFLVGDRSHPQSDEIYRELDVL 581
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 194/425 (45%), Gaps = 35/425 (8%)
Query: 24 QTRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFY 83
Q F +LD + L+ +H+R L L NSSL KLM Y ++KVF
Sbjct: 39 QETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFD 98
Query: 84 FTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSC-FSVSHEQ 142
+ +I + ++R+ G + + + ++ M ++ PD + VL++C S +
Sbjct: 99 EIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVI 158
Query: 143 GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFE 201
G+ +H K+G+ + V N LV +Y K GFL+ A L+ MS ++ WN+++ +
Sbjct: 159 GRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQ 218
Query: 202 SGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTV 261
+ + ++ ++ M I ++ T+ +LL + VSN E
Sbjct: 219 NQRFDDALEVCREMESVKISHDAGTMASLLPA------------------VSNTTTENV- 259
Query: 262 NTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGV 321
MYVK MF KM + LV WN+M+ Y N P E++EL M G
Sbjct: 260 ------MYVKD--------MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGF 305
Query: 322 RPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARR 381
PD + + + GK++H ++ R + + NALIDMY+ C L AR
Sbjct: 306 EPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARD 365
Query: 382 IFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGA 441
+F+ + + VVSW+AMI A+ + +A++LF +++ G D I + L + G
Sbjct: 366 VFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGL 425
Query: 442 LHYVR 446
L R
Sbjct: 426 LEEGR 430
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 2/198 (1%)
Query: 345 KQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVH 404
+ +H+ +I S+ L+ Y++ + SAR++FD I ++ V+ + MI+++ +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 405 DQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXE 464
E + +F M C R D +L + G + R +HG
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 465 TSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSN 524
L++ Y KCG + AR + DE S +D+++WNS++ Y+++ + E+ +M+
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDE--MSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK 236
Query: 525 VKPDQVTFLGLLTACVNS 542
+ D T LL A N+
Sbjct: 237 ISHDAGTMASLLPAVSNT 254
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 6/158 (3%)
Query: 432 ILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSH 491
+L T+ I L R +H L+ +YA + ARK+FDE
Sbjct: 48 VLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDE--IPE 102
Query: 492 KDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEI 551
+++I N MI +Y +G + + +++ M NV+PD TF +L AC SG + G++I
Sbjct: 103 RNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKI 162
Query: 552 FKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIE 589
+ G + +V + G+ G + EA +++
Sbjct: 163 HGSATKV-GLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 301 bits (771), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 162/508 (31%), Positives = 274/508 (53%), Gaps = 4/508 (0%)
Query: 192 WNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLII 251
WN + + E L+ M + P++ + +L+S L L GQ LH +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 252 VSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDL--VVWNIMVSAYAGNGCPKES 309
E V TAL+SMY K G + DAR +FE+ P++ V +N ++S Y N ++
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 310 LELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDM 369
+ M +GV D T + + T ++ G+ +H ++ G D +V+V N+ I M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 370 YSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIV 429
Y C + + RR+FD + K +++W+A+I ++ + + L L+ +MK G D +
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 430 INILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKS 489
+++L + A +GA + + ++ YA+CG + AR +FD
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFD--IM 318
Query: 490 SHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGK 549
K +++W +MI Y HG L++ M ++PD F+ +L+AC +SGL DKG
Sbjct: 319 PVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 550 EIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKM 609
E+F+ M Y +P EH++C+VDLLGRAG++DEA + IE++P+ D V+G LL ACK+
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKI 438
Query: 610 HSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCS 669
H + +AE+A K+I EP N G YVL+SNIY+ + + + ++R +R+R +K PG S
Sbjct: 439 HKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYS 498
Query: 670 WLESNGQVHEFRVADQSHPRSVDIYSIL 697
++E G+VH F D+SH ++ +++ +L
Sbjct: 499 YVEHKGRVHLFLAGDRSHEQTEEVHRML 526
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 183/355 (51%), Gaps = 4/355 (1%)
Query: 90 SVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHE-QGKMVHA 148
S ++ LR L+ +++ LY+ M+ PD S F+L+SC S+S G+ +H
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 149 QIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL--EGMSVTELAY-WNNMISQAFESGKM 205
+ K G + V +L+ +Y K G + + E ++L+ +N +IS + K+
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 206 EECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTAL 265
+ +F RM++ + +S+T++ L+ L +G++LH + L E+ V +
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197
Query: 266 LSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDM 325
++MY+K GS++ R +F++MP L+ WN ++S Y+ NG + LEL M SGV PD
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257
Query: 326 FTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDL 385
FT + +SS L + G ++ V NG V V NA I MY+ C L AR +FD+
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDI 317
Query: 386 ITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIG 440
+ K++VSW+AMI + +H L LF +M G R D + + +L + G
Sbjct: 318 MPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSG 372
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 176/376 (46%), Gaps = 16/376 (4%)
Query: 40 PQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDS----VIYSA 95
P QQ+H G + + L+ Y K GL ++KVF ENP S V Y+A
Sbjct: 69 PVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVF--EENPQSSQLSVCYNA 126
Query: 96 ILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQIVKLG 154
++ + + ++++ M E + D + ++ C + G+ +H Q VK G
Sbjct: 127 LISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGG 186
Query: 155 MDAFDLVRNSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFESGKMEECFQLFS 213
+D+ V NS + +Y K G + A L + M V L WN +IS ++G + +L+
Sbjct: 187 LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYE 246
Query: 214 RMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLG 273
+M+ + P+ T++++L S L KIG + L+ + + V+ A +SMY + G
Sbjct: 247 QMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCG 306
Query: 274 SLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAIS 333
+L AR +F+ MP LV W M+ Y +G + L L M++ G+RPD + +S
Sbjct: 307 NLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLS 366
Query: 334 SITQLKHTEWGKQMHAHVIRNGSDYQVSV----HNALIDMYSACNGLNSARRIFD-LITD 388
+ + T+ G ++ + R +Y++ ++ L+D+ L+ A + + +
Sbjct: 367 ACSHSGLTDKGLELFRAMKR---EYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVE 423
Query: 389 KTVVSWSAMIKAHAVH 404
W A++ A +H
Sbjct: 424 PDGAVWGALLGACKIH 439
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 285/511 (55%), Gaps = 12/511 (2%)
Query: 193 NNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIV 252
N +I + GK+++ ++ S+ + Q + ++ + L++ H I+
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRV----HRHILD 105
Query: 253 SNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLEL 312
+ + + T L+ MY LGS+ AR +F+K + + VWN + A G +E L L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 313 VYCMVRSGVRPDMFTAI----PAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALID 368
+ M R GV D FT ++S + H GK++HAH+ R G V + L+D
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 369 MYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEM--KLCGTRVDF 426
MY+ ++ A +F + + VVSWSAMI +A + + EAL F EM + + +
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 427 IIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDE 486
+ ++++L A + AL + +HGY ++L+ Y +CG +E+ +++FD
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFD- 344
Query: 487 GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVD 546
+ +D+++WNS+IS+Y HG + +++ +M + P VTF+ +L AC + GLV+
Sbjct: 345 -RMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVE 403
Query: 547 KGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSA 606
+GK +F+ M +G +P EH+ACMVDLLGRA ++DEA+K+++ + +V+G LL +
Sbjct: 404 EGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS 463
Query: 607 CKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTP 666
C++H + LAE A+++L +EPKNAGNYVLL++IYA A WD+V +++ L RGL+K P
Sbjct: 464 CRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLP 523
Query: 667 GCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
G W+E +++ F D+ +P I++ L
Sbjct: 524 GRCWMEVRRKMYSFVSVDEFNPLMEQIHAFL 554
Score = 149 bits (377), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 197/370 (53%), Gaps = 10/370 (2%)
Query: 45 QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFG 104
++H +G Q+ L++KL+ Y+ G ++KVF T +++A+ R L+ G
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 105 EHEKTLFLYKEMVEKSMYPDEESCSFVLRSCF----SVSH-EQGKMVHAQIVKLGMDAFD 159
E+ L LY +M + D + ++VL++C +V+H +GK +HA + + G +
Sbjct: 158 HGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHV 217
Query: 160 LVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKE 218
+ +LV++Y + G ++ A GM V + W+ MI+ ++GK E + F M +E
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE 277
Query: 219 --NIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLK 276
+ PNS+T++++L++ L L+ G+ +H I+ L L V +AL++MY + G L+
Sbjct: 278 TKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLE 337
Query: 277 DARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSIT 336
+ +F++M D+V WN ++S+Y +G K+++++ M+ +G P T + + + +
Sbjct: 338 VGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACS 397
Query: 337 QLKHTEWGKQMHAHVIRN-GSDYQVSVHNALIDMYSACNGLN-SARRIFDLITDKTVVSW 394
E GK++ + R+ G Q+ + ++D+ N L+ +A+ + D+ T+ W
Sbjct: 398 HEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVW 457
Query: 395 SAMIKAHAVH 404
+++ + +H
Sbjct: 458 GSLLGSCRIH 467
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 113/230 (49%), Gaps = 11/230 (4%)
Query: 28 FTTSSLLDLCTKPQ----HL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQK 80
FT + +L C + HL ++IHA G + + + L+D Y +FG +
Sbjct: 179 FTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASY 238
Query: 81 VFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVE--KSMYPDEESCSFVLRSCFSV 138
VF + V +SA++ ++ G+ + L ++EM+ K P+ + VL++C S+
Sbjct: 239 VFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASL 298
Query: 139 SH-EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMI 196
+ EQGK++H I++ G+D+ V ++LV +Y + G L + M ++ WN++I
Sbjct: 299 AALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLI 358
Query: 197 SQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQAL 246
S G ++ Q+F M P +T +++L + L++ G+ L
Sbjct: 359 SSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRL 408
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 160/471 (33%), Positives = 262/471 (55%), Gaps = 4/471 (0%)
Query: 230 LLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRND 289
LL + +D L+ GQ +H+ +I + + T LL Y K L+DAR + ++MP +
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 290 LVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHA 349
+V W M+S Y+ G E+L + M+RS +P+ FT ++S + GKQ+H
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 350 HVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLE 409
+++ D + V ++L+DMY+ + AR IF+ + ++ VVS +A+I +A E
Sbjct: 178 LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237
Query: 410 ALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLA 469
AL +F + G +++ ++L + + L + + H + + SL+
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297
Query: 470 SYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMK-LSNVKPD 528
Y+KCG + AR+LFD + I+WN+M+ YSKHG + EL+ M+ VKPD
Sbjct: 298 MYSKCGNLSYARRLFD--NMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 355
Query: 529 QVTFLGLLTACVNSGLVDKGKEIFKEMV-DLYGYQPSQEHHACMVDLLGRAGQIDEASKI 587
VT L +L+ C + + D G IF MV YG +P EH+ C+VD+LGRAG+IDEA +
Sbjct: 356 AVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEF 415
Query: 588 IETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKW 647
I+ +P A V G LL AC++H + E ++LI +EP+NAGNYV+LSN+YA+AG+W
Sbjct: 416 IKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRW 475
Query: 648 DKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILK 698
V +R+ + + + K PG SW++ +H F D++HPR ++ + +K
Sbjct: 476 ADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMK 526
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 177/340 (52%), Gaps = 9/340 (2%)
Query: 84 FTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDE---ESCSFVLRSCFS-VS 139
F+ +P + + IL +SQ + + L + ++E +M E +L +C +
Sbjct: 12 FSSSPTNYVLQTIL-PISQLCSNGR---LQEALLEMAMLGPEMGFHGYDALLNACLDKRA 67
Query: 140 HEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQ 198
G+ VHA ++K +R L+ Y K L +A + L+ M + W MIS+
Sbjct: 68 LRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISR 127
Query: 199 AFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGE 258
++G E +F+ M + + +PN T +L S + L +G+ +H LI+ N
Sbjct: 128 YSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSH 187
Query: 259 LTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVR 318
+ V ++LL MY K G +K+AR +FE +P D+V +++ YA G +E+LE+ + +
Sbjct: 188 IFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHS 247
Query: 319 SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNS 378
G+ P+ T +++++ L + GKQ H HV+R + + N+LIDMYS C L+
Sbjct: 248 EGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSY 307
Query: 379 ARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMK 418
ARR+FD + ++T +SW+AM+ ++ H E L LF M+
Sbjct: 308 ARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMR 347
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 175/387 (45%), Gaps = 9/387 (2%)
Query: 27 FFTTSSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFY 83
F +LL+ C + L Q++HA + L ++L+ Y K ++KV
Sbjct: 52 FHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLD 111
Query: 84 FTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQ 142
+ V ++A++ SQ G + L ++ EM+ P+E + + VL SC S
Sbjct: 112 EMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGL 171
Query: 143 GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFE 201
GK +H IVK D+ V +SL+++Y K G + A E E + ++ +I+ +
Sbjct: 172 GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQ 231
Query: 202 SGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTV 261
G EE ++F R+ E + PN +T +LL + L LL G+ H ++ L +
Sbjct: 232 LGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVL 291
Query: 262 NTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMV-RSG 320
+L+ MY K G+L AR +F+ MP + WN M+ Y+ +G +E LEL M
Sbjct: 292 QNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 351
Query: 321 VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRN--GSDYQVSVHNALIDMYSACNGLNS 378
V+PD T + +S + + + G + ++ G+ + ++DM ++
Sbjct: 352 VKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDE 411
Query: 379 ARRIFDLITDK-TVVSWSAMIKAHAVH 404
A + K T +++ A VH
Sbjct: 412 AFEFIKRMPSKPTAGVLGSLLGACRVH 438
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 168/549 (30%), Positives = 298/549 (54%), Gaps = 11/549 (2%)
Query: 131 VLRSCFSV-SHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEK--NGFLNAHEPLEGMSVT 187
+L++C V S G HA +VK G++ V NSL+ LY K G +G V
Sbjct: 67 LLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVK 126
Query: 188 ELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALH 247
+ W +M+S + + ++F M + N T+ + +++ +L +++G+ H
Sbjct: 127 DAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFH 186
Query: 248 SLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPK 307
++I +++ L +Y DAR +F++MP D++ W ++SA++ N +
Sbjct: 187 GVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYE 246
Query: 308 ESLELVYCMVRS-GVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNAL 366
E+L L Y M R G+ PD T +++ L+ + GK++H +I NG V V ++L
Sbjct: 247 EALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSL 306
Query: 367 IDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDF 426
+DMY C + AR++F+ ++ K VSWSA++ + + + +A+ +F EM+ D
Sbjct: 307 LDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDL 362
Query: 427 IIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDE 486
+L A + A+ + +HG E++L+ Y K GCI+ A +++
Sbjct: 363 YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYS- 421
Query: 487 GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVD 546
K S +++I WN+M+SA +++G + +N M +KPD ++F+ +LTAC ++G+VD
Sbjct: 422 -KMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVD 480
Query: 547 KGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSA 606
+G+ F M YG +P EH++CM+DLLGRAG +EA ++E +DA ++G LL
Sbjct: 481 EGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGP 540
Query: 607 CKMHSDP-RLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKT 665
C ++D R+AE A++++ +EPK +YVLLSN+Y A G+ +R + RG+ KT
Sbjct: 541 CAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKT 600
Query: 666 PGCSWLESN 674
G SW++++
Sbjct: 601 VGQSWIDAH 609
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 207/418 (49%), Gaps = 13/418 (3%)
Query: 31 SSLLDLCTKP---QHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGL--SQKVFYFT 85
+SLL C K H Q HA GL + ++ + L+ Y K G PG+ +++VF
Sbjct: 65 ASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLG-PGMRETRRVFDGR 123
Query: 86 ENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GK 144
D++ +++++ EH K L ++ EMV + +E + S +++C + + G+
Sbjct: 124 FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGR 183
Query: 145 MVHAQIVKLGMDAFDLVRNSLVELYEKNGF-LNAHEPLEGMSVTELAYWNNMISQAFESG 203
H ++ G + + ++L LY N ++A + M ++ W ++S ++
Sbjct: 184 CFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKND 243
Query: 204 KMEECFQLFSRM-RKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN 262
EE LF M R + + P+ T +L + +L LK G+ +H +I + + + V
Sbjct: 244 LYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVE 303
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
++LL MY K GS+++AR +F M + + V W+ ++ Y NG ++++E+ R
Sbjct: 304 SSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEI----FREMEE 359
Query: 323 PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRI 382
D++ + + L GK++H +R G V V +ALID+Y ++SA R+
Sbjct: 360 KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRV 419
Query: 383 FDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIG 440
+ ++ + +++W+AM+ A A + + EA+S F +M G + D+I I IL G
Sbjct: 420 YSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTG 477
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 183/387 (47%), Gaps = 9/387 (2%)
Query: 203 GKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN 262
G++ E ++ + I +LL++ + G H+ ++ S L + V
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVG 99
Query: 263 TALLSMYVKLG-SLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGV 321
+LLS+Y KLG +++ R +F+ D + W M+S Y ++LE+ MV G+
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGL 159
Query: 322 RPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARR 381
+ FT A+ + ++L G+ H VI +G ++ + + L +Y ARR
Sbjct: 160 DANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARR 219
Query: 382 IFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEM-KLCGTRVDFIIVINILPTFAKIG 440
+FD + + V+ W+A++ A + +D EAL LF M + G D +L +
Sbjct: 220 VFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 279
Query: 441 ALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSM 500
L + +HG E+SLL Y KCG + AR++F+ S K+ ++W+++
Sbjct: 280 RLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFN--GMSKKNSVSWSAL 337
Query: 501 ISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYG 560
+ Y ++GE + E++ +M+ + D F +L AC V GKEI + V G
Sbjct: 338 LGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVR-RG 392
Query: 561 YQPSQEHHACMVDLLGRAGQIDEASKI 587
+ + ++DL G++G ID AS++
Sbjct: 393 CFGNVIVESALIDLYGKSGCIDSASRV 419
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 162/325 (49%), Gaps = 10/325 (3%)
Query: 28 FTTSSLLDLCTKPQHLQQ---IHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
FT SS + C++ ++ H HG N +SS L Y P +++VF
Sbjct: 164 FTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDE 223
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVE-KSMYPDEESCSFVLRSCFSVSH-EQ 142
PD + ++A+L S+ +E+ L L+ M K + PD + VL +C ++ +Q
Sbjct: 224 MPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQ 283
Query: 143 GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFE 201
GK +H +++ G+ + +V +SL+++Y K G + A + GMS W+ ++ +
Sbjct: 284 GKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQ 343
Query: 202 SGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTV 261
+G+ E+ ++F M ++++ +L++ L +++G+ +H + G + V
Sbjct: 344 NGEHEKAIEIFREMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIV 399
Query: 262 NTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGV 321
+AL+ +Y K G + A ++ KM +++ WN M+SA A NG +E++ MV+ G+
Sbjct: 400 ESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGI 459
Query: 322 RPDMFTAIPAISSITQLKHTEWGKQ 346
+PD + I +++ + G+
Sbjct: 460 KPDYISFIAILTACGHTGMVDEGRN 484
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 146/283 (51%), Gaps = 13/283 (4%)
Query: 29 TTSSLLDLCTKPQHLQQ---IHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFT 85
T ++L C + L+Q IH + +G+ N + S L+D Y K G +++VF
Sbjct: 267 TFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGM 326
Query: 86 ENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESC-SFVLRSCFSVSHEQ-G 143
+SV +SA+L Q GEHEK + +++EM EK +Y C VL++C ++ + G
Sbjct: 327 SKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLY-----CFGTVLKACAGLAAVRLG 381
Query: 144 KMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFES 202
K +H Q V+ G +V ++L++LY K+G ++ A MS+ + WN M+S ++
Sbjct: 382 KEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQN 441
Query: 203 GKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN 262
G+ EE F+ M K+ I+P+ I+ I +L + ++ G+ L+ S T +
Sbjct: 442 GRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEH 501
Query: 263 -TALLSMYVKLGSLKDARLMFEKMP-RNDLVVWNIMVSAYAGN 303
+ ++ + + G ++A + E+ RND +W +++ A N
Sbjct: 502 YSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAAN 544
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 199/722 (27%), Positives = 361/722 (50%), Gaps = 56/722 (7%)
Query: 29 TTSSLLDLCTK---PQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGL--PGLSQKVFY 83
T + +L LC + + + +H+ GL +++ + + L+ Y KFG P + F
Sbjct: 124 TFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPD-AYTAFD 182
Query: 84 FTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFS----VS 139
+ D V ++AI+ S+ + M+++ P+ + + VL C S ++
Sbjct: 183 GIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIA 242
Query: 140 HEQGKMVHAQIVKLG-MDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMIS 197
G+ +H+ +V+ + V NSLV Y + G + A M +L WN +I+
Sbjct: 243 CRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIA 302
Query: 198 QAFESGKMEECFQLFSRM-RKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIV-SNL 255
+ + + FQLF + K ++ P+S+T+I++L L L G+ +HS I+ S L
Sbjct: 303 GYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYL 362
Query: 256 CGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYC 315
+ +V AL+S Y + G A F M D++ WN ++ A+A + + L L++
Sbjct: 363 LEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHH 422
Query: 316 MVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNG---SDYQVSVHNALIDMYSA 372
++ + D T + + ++ K++H + ++ G + + + NAL+D Y+
Sbjct: 423 LLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAK 482
Query: 373 CNGLNSARRIF-DLITDKTVVS-------------------------------WSAMIKA 400
C + A +IF L +T+VS WS M++
Sbjct: 483 CGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRI 542
Query: 401 HAVHDQCL--EALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXX 458
+A + C EA+ +F E++ G R + + ++N+LP A++ +LH VR HGY
Sbjct: 543 YA--ESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG 600
Query: 459 XXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYN 518
T LL YAKCG ++ A +F + +D++ + +M++ Y+ HG + +Y+
Sbjct: 601 DIRLKGT-LLDVYAKCGSLKHAYSVFQS--DARRDLVMFTAMVAGYAVHGRGKEALMIYS 657
Query: 519 QMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRA 578
M SN+KPD V +LTAC ++GL+ G +I+ + ++G +P+ E +AC VDL+ R
Sbjct: 658 HMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARG 717
Query: 579 GQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLS 638
G++D+A + +P+ +A ++G LL AC ++ L A L+ E + GN+VL+S
Sbjct: 718 GRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLIS 777
Query: 639 NIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILK 698
N+YAA KW+ V ++R+ ++ + +KK GCSWLE +GQ + F D SHPR I+ ++
Sbjct: 778 NMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVN 837
Query: 699 VM 700
+
Sbjct: 838 AL 839
Score = 182 bits (462), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 251/494 (50%), Gaps = 13/494 (2%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQF 103
+ +H F G S +S +++ Y K QK+F ++ D V+++ +L LS
Sbjct: 41 RALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVS 100
Query: 104 GEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHE-QGKMVHAQIVKLGMDAFDLVR 162
E F P + + VL C + GK +H+ I+K G++ LV
Sbjct: 101 CGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVG 160
Query: 163 NSLVELYEKNGFL--NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENI 220
N+LV +Y K GF+ +A+ +G++ ++ WN +I+ E+ M + F+ F M KE
Sbjct: 161 NALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPT 220
Query: 221 QPNSITVINLLR--STVDLHL-LKIGQALHSLIIV-SNLCGELTVNTALLSMYVKLGSLK 276
+PN T+ N+L +++D ++ + G+ +HS ++ S L + V +L+S Y+++G ++
Sbjct: 221 EPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIE 280
Query: 277 DARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG-VRPDMFTAIPAISSI 335
+A +F +M DLV WN++++ YA N ++ +L + +V G V PD T I +
Sbjct: 281 EAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVC 340
Query: 336 TQLKHTEWGKQMHAHVIRNGSDYQ-VSVHNALIDMYSACNGLNSARRIFDLITDKTVVSW 394
QL GK++H++++R+ + SV NALI Y+ ++A F L++ K ++SW
Sbjct: 341 AQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISW 400
Query: 395 SAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXX 454
+A++ A A + + L+L + +D + ++++L + + V+ +HGY
Sbjct: 401 NAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVK 460
Query: 455 XXXXXXXXXE---TSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWF 511
+LL +YAKCG +E A K+F G S + ++++NS++S Y G
Sbjct: 461 AGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIF-LGLSERRTLVSYNSLLSGYVNSGSHD 519
Query: 512 QCFELYNQMKLSNV 525
L+ +M +++
Sbjct: 520 DAQMLFTEMSTTDL 533
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 137/567 (24%), Positives = 251/567 (44%), Gaps = 34/567 (5%)
Query: 131 VLRSCFSVSH-EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTE 188
V+++C SVS G+ +H + KLG A V S++ +Y K ++ + M +
Sbjct: 27 VVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLD 86
Query: 189 LAYWNNMISQ-AFESGKMEECFQLFSRMR-KENIQPNSITVINLLRSTVDLHLLKIGQAL 246
WN +++ + G+ E + F M + +P+S+T +L V L G+++
Sbjct: 87 PVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSM 144
Query: 247 HSLIIVSNLCGELTVNTALLSMYVKLGSL-KDARLMFEKMPRNDLVVWNIMVSAYAGNGC 305
HS II + L + V AL+SMY K G + DA F+ + D+V WN +++ ++ N
Sbjct: 145 HSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNM 204
Query: 306 PKESLELVYCMVRSGVRPDMFT---AIPAISSITQLKHTEWGKQMHAHVI-RNGSDYQVS 361
++ M++ P+ T +P +S+ + G+Q+H++V+ R+ V
Sbjct: 205 MADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVF 264
Query: 362 VHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCG 421
V N+L+ Y + A +F + K +VSW+ +I +A + + +A LF + G
Sbjct: 265 VCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKG 324
Query: 422 -TRVDFIIVINILPTFAKIGALHYVRYLHGYXXX-XXXXXXXXXETSLLASYAKCGCIEM 479
D + +I+ILP A++ L + +H Y +L++ YA+ G
Sbjct: 325 DVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSA 384
Query: 480 ARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTAC 539
A F S KDII+WN+++ A++ + FQ L + + + D VT L LL C
Sbjct: 385 AYWAFS--LMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFC 442
Query: 540 VNSGLVDKGKEI--FKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDA 597
+N + K KE+ + L + + ++D + G ++ A KI +
Sbjct: 443 INVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTL 502
Query: 598 RVYGPLLSA---CKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMR 654
Y LLS H D ++ M + + L+ IYA + ++ +
Sbjct: 503 VSYNSLLSGYVNSGSHDDAQML------FTEMSTTDLTTWSLMVRIYAESCCPNEAIGVF 556
Query: 655 SFLRDRGLKKT--------PGCSWLES 673
++ RG++ P C+ L S
Sbjct: 557 REIQARGMRPNTVTIMNLLPVCAQLAS 583
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 161/331 (48%), Gaps = 10/331 (3%)
Query: 228 INLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPR 287
++++++ + L G+ALH + V+ ++L+MY K + D + MF +M
Sbjct: 25 LDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDS 84
Query: 288 NDLVVWNIMVSAYAGNGCPKESLELVYCM-VRSGVRPDMFTAIPAISSITQLKHTEWGKQ 346
D VVWNI+++ + + C +E++ M +P T + +L + GK
Sbjct: 85 LDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKS 143
Query: 347 MHAHVIRNGSDYQVSVHNALIDMYSACNGL-NSARRIFDLITDKTVVSWSAMIKAHAVHD 405
MH+++I+ G + V NAL+ MY+ + A FD I DK VVSW+A+I + ++
Sbjct: 144 MHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENN 203
Query: 406 QCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIG---ALHYVRYLHGYXXXXXXXXXXX 462
+A F M T ++ + N+LP A + A R +H Y
Sbjct: 204 MMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHV 263
Query: 463 XE-TSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELY-NQM 520
SL++ Y + G IE A LF S KD+++WN +I+ Y+ + EWF+ F+L+ N +
Sbjct: 264 FVCNSLVSFYLRVGRIEEAASLFTRMGS--KDLVSWNVVIAGYASNCEWFKAFQLFHNLV 321
Query: 521 KLSNVKPDQVTFLGLLTACVNSGLVDKGKEI 551
+V PD VT + +L C + GKEI
Sbjct: 322 HKGDVSPDSVTIISILPVCAQLTDLASGKEI 352
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 118/276 (42%), Gaps = 28/276 (10%)
Query: 324 DMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIF 383
D+ A ++S +T G+ +H V + G V ++++MY+ C ++ +++F
Sbjct: 26 DVVKACASVSDLTS------GRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 384 DLITDKTVVSWSAMIKAHAVHDQC-LEALSLFIEMKLCG----TRVDFIIVINILPTFAK 438
+ V W+ ++ +V C E + F M + V F IV LP +
Sbjct: 80 RQMDSLDPVVWNIVLTGLSV--SCGRETMRFFKAMHFADEPKPSSVTFAIV---LPLCVR 134
Query: 439 IGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCI-EMARKLFDEGKSSHKDIIAW 497
+G + + +H Y +L++ YAK G I A FD + KD+++W
Sbjct: 135 LGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFD--GIADKDVVSW 192
Query: 498 NSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDK------GKEI 551
N++I+ +S++ F + M +P+ T +L C + +DK G++I
Sbjct: 193 NAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCAS---MDKNIACRSGRQI 249
Query: 552 FKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKI 587
+V Q +V R G+I+EA+ +
Sbjct: 250 HSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASL 285
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 298 bits (763), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 185/609 (30%), Positives = 309/609 (50%), Gaps = 40/609 (6%)
Query: 127 SCSFVLRSCFSV-SHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGM 184
S + +L +C V + G VHA + G++ ++ LV Y N A +E
Sbjct: 45 SAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENS 104
Query: 185 SVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQ 244
+ WN +I+ ++ EE + RM + I+P++ T ++L++ + + G+
Sbjct: 105 DILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGR 164
Query: 245 ALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNG 304
+H I VS+ L V AL+SMY + ++ AR +F++M D V WN +++ YA G
Sbjct: 165 VVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEG 224
Query: 305 CPKESLELVYCMVRSGVRPDMFT-------------AIPAISSITQLKH----------- 340
E+ EL M SGV + T + A+ I+++++
Sbjct: 225 MWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMI 284
Query: 341 -----------TEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDK 389
GK++H I + D +V N LI MYS C L A +F +
Sbjct: 285 IGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEEN 344
Query: 390 TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLH 449
++ +W+++I +A ++ EA L EM + G + + I + +ILP A+I L + + H
Sbjct: 345 SLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFH 404
Query: 450 GYXXXXX-XXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHG 508
Y SL+ YAK G I A+++ D S +D + + S+I Y G
Sbjct: 405 CYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSD--LMSKRDEVTYTSLIDGYGNQG 462
Query: 509 EWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHH 568
E L+ +M S +KPD VT + +L+AC +S LV +G+ +F +M YG +P +H
Sbjct: 463 EGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHF 522
Query: 569 ACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEP 628
+CMVDL GRAG + +A II +P + LL+AC +H + ++ + AA+KL+ M+P
Sbjct: 523 SCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKP 582
Query: 629 KNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHP 688
+N G YVL++N+YAAAG W K+A++R+ +RD G+KK PGC+W++++ F V D S P
Sbjct: 583 ENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSP 642
Query: 689 RSVDIYSIL 697
+ + Y +L
Sbjct: 643 EACNTYPLL 651
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 179/425 (42%), Gaps = 42/425 (9%)
Query: 203 GKMEECFQLFSRMRKENIQPNSITVI-----NLLRSTVDLHLLKIGQALHSLIIVSNLCG 257
G + + F+ FS +R ++ S ++ +LL + VD+ G +H+ I S +
Sbjct: 17 GHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEY 76
Query: 258 ELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMV 317
+ L++ Y +A+ + E + WN+++++YA N +E + MV
Sbjct: 77 HSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMV 136
Query: 318 RSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLN 377
G+RPD FT + + + +G+ +H + + + V NALI MY +
Sbjct: 137 SKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMG 196
Query: 378 SARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCG---------------- 421
ARR+FD + ++ VSW+A+I +A EA LF +M G
Sbjct: 197 IARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCL 256
Query: 422 -------------------TRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXX 462
T +D + +I L + IGA+ + +HG
Sbjct: 257 QTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDN 316
Query: 463 XETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKL 522
+L+ Y+KC + A +F + + + WNS+IS Y++ + + L +M +
Sbjct: 317 VRNTLITMYSKCKDLRHALIVFRQ--TEENSLCTWNSIISGYAQLNKSEEASHLLREMLV 374
Query: 523 SNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQID 582
+ +P+ +T +L C + GKE ++ ++ +VD+ ++G+I
Sbjct: 375 AGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIV 434
Query: 583 EASKI 587
A ++
Sbjct: 435 AAKQV 439
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 177/397 (44%), Gaps = 16/397 (4%)
Query: 20 VAPFQTRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQ 79
V+ +++ + ++L+ + + +++ I R F +++ + +++CY G+ +
Sbjct: 172 VSSYKSSLYVCNALISMYKRFRNMG-IARRLFDRMFERDAVSWNAVINCYASEGMWSEAF 230
Query: 80 KVF---YFTENPDSVI-YSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSC 135
++F +F+ SVI ++ I Q G + L L M D + L++C
Sbjct: 231 ELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKAC 290
Query: 136 FSVSHEQ-GKMVHAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWN 193
+ + GK +H + D D VRN+L+ +Y K +A L WN
Sbjct: 291 SLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWN 350
Query: 194 NMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVS 253
++IS + K EE L M QPNSIT+ ++L + L+ G+ H I+
Sbjct: 351 SIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRR 410
Query: 254 NLCGELT-VNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLEL 312
+ T + +L+ +Y K G + A+ + + M + D V + ++ Y G +L L
Sbjct: 411 KCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALAL 470
Query: 313 VYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSV----HNALID 368
M RSG++PD T + +S+ + K G+++ ++ +Y + + ++D
Sbjct: 471 FKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERL---FMKMQCEYGIRPCLQHFSCMVD 527
Query: 369 MYSACNGLNSARRIF-DLITDKTVVSWSAMIKAHAVH 404
+Y L A+ I ++ + +W+ ++ A +H
Sbjct: 528 LYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIH 564
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 6/163 (3%)
Query: 19 IVAPFQTRFFTTSSLLDLCTKP---QHLQQIHARFFLHGLHQN-SSLSSKLMDCYTKFGL 74
+VA FQ T +S+L LC + QH ++ H ++ + L + L+D Y K G
Sbjct: 373 LVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGK 432
Query: 75 PGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRS 134
+++V D V Y++++ GE L L+KEM + PD + VL +
Sbjct: 433 IVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSA 492
Query: 135 C--FSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL 175
C + HE ++ + G+ + +V+LY + GFL
Sbjct: 493 CSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFL 535
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 171/543 (31%), Positives = 294/543 (54%), Gaps = 34/543 (6%)
Query: 188 ELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRS-TVDLHLLKIGQAL 246
++ WNNMI + E +L+ M KE + P+S T LL D L G+ L
Sbjct: 98 DVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKL 157
Query: 247 HSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCP 306
H ++ L L V AL+ MY G + AR +F++ + D+ WN+M+S Y
Sbjct: 158 HCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEY 217
Query: 307 KESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNAL 366
+ES+EL+ M R+ V P T + +S+ +++K + K++H +V ++ + + NAL
Sbjct: 218 EESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENAL 277
Query: 367 IDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHA----------------VHDQ---- 406
++ Y+AC ++ A RIF + + V+SW++++K + V D+
Sbjct: 278 VNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWT 337
Query: 407 ----------CL-EALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXX 455
C E+L +F EM+ G D ++++L A +G+L ++ Y
Sbjct: 338 IMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKN 397
Query: 456 XXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFE 515
+L+ Y KCGC E A+K+F + +D W +M+ + +G+ + +
Sbjct: 398 KIKNDVVVGNALIDMYFKCGCSEKAQKVFHD--MDQRDKFTWTAMVVGLANNGQGQEAIK 455
Query: 516 LYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLL 575
++ QM+ +++PD +T+LG+L+AC +SG+VD+ ++ F +M + +PS H+ CMVD+L
Sbjct: 456 VFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDML 515
Query: 576 GRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYV 635
GRAG + EA +I+ +P+N ++ V+G LL A ++H+D +AE+AA+K++ +EP N Y
Sbjct: 516 GRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYA 575
Query: 636 LLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYS 695
LL NIYA +W + ++R + D +KKTPG S +E NG HEF D+SH +S +IY
Sbjct: 576 LLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYM 635
Query: 696 ILK 698
L+
Sbjct: 636 KLE 638
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 179/642 (27%), Positives = 331/642 (51%), Gaps = 12/642 (1%)
Query: 69 YTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESC 128
Y K G ++++F + + +++++ +Q G +E+ + L+ E E ++ D+ +
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 129 SFVLRSCFS-VSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSV 186
+ L C + G+++H +V G+ + N L+++Y K G L+ A +
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 187 TELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRS---TVDLHLLKIG 243
+ WN++IS G EE L ++M ++ + + + ++L++ ++ ++ G
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKG 271
Query: 244 QALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAY--- 300
A+H + ++ V TALL MY K GSLK+A +F MP ++V +N M+S +
Sbjct: 272 MAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQM 331
Query: 301 --AGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDY 358
+ E+ +L M R G+ P T + + + K E+G+Q+HA + +N
Sbjct: 332 DEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQS 391
Query: 359 QVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMK 418
+ +ALI++Y+ + F + + + SW++MI H ++Q A LF ++
Sbjct: 392 DEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLF 451
Query: 419 LCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIE 478
R + V ++ A AL + GY +TS ++ YAK G +
Sbjct: 452 SSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMP 511
Query: 479 MARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTA 538
+A ++F E + + D+ +++MIS+ ++HG + ++ MK +KP+Q FLG+L A
Sbjct: 512 LANQVFIEVQ--NPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIA 569
Query: 539 CVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDAR 598
C + GLV +G + F+ M + Y P+++H C+VDLLGR G++ +A +I +
Sbjct: 570 CCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPV 629
Query: 599 VYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLR 658
+ LLS+C+++ D + + A++L+ +EP+ +G+YVLL NIY +G ++R +R
Sbjct: 630 TWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMR 689
Query: 659 DRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILKVM 700
DRG+KK P SW+ Q H F VAD SHP S IY++L+ M
Sbjct: 690 DRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/487 (24%), Positives = 221/487 (45%), Gaps = 21/487 (4%)
Query: 143 GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFE 201
GK+ H ++K ++ + N+L+ +Y K L A + + M + +N++IS +
Sbjct: 66 GKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQ 125
Query: 202 SGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTV 261
G E+ +LF R+ N++ + T L + L +G+ LH L++V+ L ++ +
Sbjct: 126 MGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFL 185
Query: 262 NTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGV 321
L+ MY K G L A +F++ D V WN ++S Y G +E L L+ M R G+
Sbjct: 186 INVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGL 245
Query: 322 RPDMF---TAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNS 378
+ + + A E G +H + + G ++ + V AL+DMY+ L
Sbjct: 246 NLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKE 305
Query: 379 ARRIFDLITDKTVVSWSAMIKAHAVHDQCL-----EALSLFIEMKLCGTRVDFIIVINIL 433
A ++F L+ K VV+++AMI D+ EA LF++M+ G +L
Sbjct: 306 AIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVL 365
Query: 434 PTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKD 493
+ L Y R +H ++L+ YA G E + F +S +D
Sbjct: 366 KACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCF--ASTSKQD 423
Query: 494 IIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEI-- 551
I +W SMI + ++ + F+L+ Q+ S+++P++ T +++AC + + G++I
Sbjct: 424 IASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQG 483
Query: 552 --FKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKM 609
K +D + + + + ++G + A+++ V N D Y ++S+
Sbjct: 484 YAIKSGIDAFTSVKTSS-----ISMYAKSGNMPLANQVFIEVQ-NPDVATYSAMISSLAQ 537
Query: 610 HSDPRLA 616
H A
Sbjct: 538 HGSANEA 544
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 197/409 (48%), Gaps = 13/409 (3%)
Query: 28 FTTSSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
FT + L C + L + +H ++GL Q L + L+D Y+K G + +F
Sbjct: 149 FTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDR 208
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRS-CFSVSH--- 140
+ D V +++++ + G E+ L L +M + + VL++ C +++
Sbjct: 209 CDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFI 268
Query: 141 EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQA 199
E+G +H KLGM+ +VR +L+++Y KNG L A + M + +N MIS
Sbjct: 269 EKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGF 328
Query: 200 FESGKM-----EECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSN 254
+ ++ E F+LF M++ ++P+ T +L++ L+ G+ +H+LI +N
Sbjct: 329 LQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNN 388
Query: 255 LCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVY 314
+ + +AL+ +Y +GS +D F + D+ W M+ + N + + +L
Sbjct: 389 FQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFR 448
Query: 315 CMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACN 374
+ S +RP+ +T +S+ G+Q+ + I++G D SV + I MY+
Sbjct: 449 QLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSG 508
Query: 375 GLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTR 423
+ A ++F + + V ++SAMI + A H EAL++F MK G +
Sbjct: 509 NMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIK 557
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 155/318 (48%), Gaps = 10/318 (3%)
Query: 242 IGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYA 301
+G+ H +I S+L L + LL+MY K L AR +F++MP +++ +N ++S Y
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124
Query: 302 GNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVS 361
G ++++EL + ++ D FT A+ + + G+ +H V+ NG QV
Sbjct: 125 QMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVF 184
Query: 362 VHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCG 421
+ N LIDMYS C L+ A +FD ++ VSW+++I + E L+L +M G
Sbjct: 185 LINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDG 244
Query: 422 TRVDFIIVINILPTFA---KIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIE 478
+ + ++L G + +H Y T+LL YAK G ++
Sbjct: 245 LNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLK 304
Query: 479 MARKLFDEGKSSHKDIIAWNSMISAYSKHGEWF-----QCFELYNQMKLSNVKPDQVTFL 533
A KLF S K+++ +N+MIS + + E + F+L+ M+ ++P TF
Sbjct: 305 EAIKLFSLMPS--KNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFS 362
Query: 534 GLLTACVNSGLVDKGKEI 551
+L AC + ++ G++I
Sbjct: 363 VVLKACSAAKTLEYGRQI 380
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 3/158 (1%)
Query: 432 ILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSH 491
+ T AK G++ + HG+ +LL Y KC + AR+LFD +
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFD--RMPE 110
Query: 492 KDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEI 551
++II++NS+IS Y++ G + Q EL+ + + +N+K D+ T+ G L C +D G E+
Sbjct: 111 RNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-EL 169
Query: 552 FKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIE 589
+V + G ++D+ + G++D+A + +
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFD 207
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 25/169 (14%)
Query: 28 FTTSSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
+T S ++ C L +QI G+ +S+ + + Y K G L+ +VF
Sbjct: 460 YTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIE 519
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGK 144
+NPD YSA++ +L+Q G + L +++ M + P++++ VL +C
Sbjct: 520 VQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIAC--------- 570
Query: 145 MVHAQIVKLGMDAFDLVRNS------------LVELYEKNGFLNAHEPL 181
H +V G+ F ++N LV+L + G L+ E L
Sbjct: 571 -CHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENL 618
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 163/545 (29%), Positives = 281/545 (51%), Gaps = 38/545 (6%)
Query: 192 WNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLII 251
W ++I + + F MR P+ ++L+S + L+ G+++H I+
Sbjct: 73 WKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIV 132
Query: 252 VSNLCGELTVNTALLSMYVKL---GS---------------------------------L 275
+ +L AL++MY KL GS +
Sbjct: 133 RLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGI 192
Query: 276 KDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSI 335
R +FE MPR D+V +N +++ YA +G +++L +V M + ++PD FT +
Sbjct: 193 DSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIF 252
Query: 336 TQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWS 395
++ GK++H +VIR G D V + ++L+DMY+ + + R+F + + +SW+
Sbjct: 253 SEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWN 312
Query: 396 AMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXX 455
+++ + + + EAL LF +M + + +++P A + LH + LHGY
Sbjct: 313 SLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG 372
Query: 456 XXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFE 515
++L+ Y+KCG I+ ARK+FD + + D ++W ++I ++ HG +
Sbjct: 373 GFGSNIFIASALVDMYSKCGNIKAARKIFD--RMNVLDEVSWTAIIMGHALHGHGHEAVS 430
Query: 516 LYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLL 575
L+ +MK VKP+QV F+ +LTAC + GLVD+ F M +YG EH+A + DLL
Sbjct: 431 LFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLL 490
Query: 576 GRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYV 635
GRAG+++EA I + + V+ LLS+C +H + LAE A+K+ ++ +N G YV
Sbjct: 491 GRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYV 550
Query: 636 LLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYS 695
L+ N+YA+ G+W ++AK+R +R +GL+K P CSW+E + H F D+SHP I
Sbjct: 551 LMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINE 610
Query: 696 ILKVM 700
LK +
Sbjct: 611 FLKAV 615
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 202/435 (46%), Gaps = 39/435 (8%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQF 103
+Q+HA+F ++S +S ++ YT L + +F ++P + + +++R +
Sbjct: 25 KQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQ 83
Query: 104 GEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQIVKLGMDAFDLVR 162
K L + EM PD VL+SC + + G+ VH IV+LGMD
Sbjct: 84 SLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTG 143
Query: 163 NSLVELYEK-------------------------------------NGFLNAHEPLEGMS 185
N+L+ +Y K G + E M
Sbjct: 144 NALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMP 203
Query: 186 VTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQA 245
++ +N +I+ +SG E+ ++ M +++P+S T+ ++L + + G+
Sbjct: 204 RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 263
Query: 246 LHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGC 305
+H +I + ++ + ++L+ MY K ++D+ +F ++ D + WN +V+ Y NG
Sbjct: 264 IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGR 323
Query: 306 PKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNA 365
E+L L MV + V+P I + L GKQ+H +V+R G + + +A
Sbjct: 324 YNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASA 383
Query: 366 LIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVD 425
L+DMYS C + +AR+IFD + VSW+A+I HA+H EA+SLF EMK G + +
Sbjct: 384 LVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPN 443
Query: 426 FIIVINILPTFAKIG 440
+ + +L + +G
Sbjct: 444 QVAFVAVLTACSHVG 458
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 168/350 (48%), Gaps = 15/350 (4%)
Query: 64 KLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYP 123
K C FG+ + ++VF D V Y+ I+ +Q G +E L + +EM + P
Sbjct: 182 KAETCIMPFGIDSV-RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240
Query: 124 DEESCSFVLRSCFSVSHE-----QGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAH 178
D SF L S + E +GK +H +++ G+D+ + +SLV++Y K+ +
Sbjct: 241 D----SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS 296
Query: 179 EPL-EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDL 237
E + + + WN++++ ++G+ E +LF +M ++P ++ +++ + L
Sbjct: 297 ERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHL 356
Query: 238 HLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMV 297
L +G+ LH ++ + + +AL+ MY K G++K AR +F++M D V W ++
Sbjct: 357 ATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAII 416
Query: 298 SAYAGNGCPKESLELVYCMVRSGVRPDM--FTAIPAISSITQLKHTEWGKQMHAHVIRNG 355
+A +G E++ L M R GV+P+ F A+ S L WG ++ G
Sbjct: 417 MGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG-YFNSMTKVYG 475
Query: 356 SDYQVSVHNALIDMYSACNGLNSARR-IFDLITDKTVVSWSAMIKAHAVH 404
+ ++ + A+ D+ L A I + + T WS ++ + +VH
Sbjct: 476 LNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 164/366 (44%), Gaps = 39/366 (10%)
Query: 260 TVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRS 319
T + ++S+Y L L +A L+F+ + ++ W ++ + ++L M S
Sbjct: 40 TSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRAS 99
Query: 320 GVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMY--------- 370
G PD + S T + +G+ +H ++R G D + NAL++MY
Sbjct: 100 GRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSK 159
Query: 371 -SACN--------------------------GLNSARRIFDLITDKTVVSWSAMIKAHAV 403
S N G++S RR+F+++ K VVS++ +I +A
Sbjct: 160 ISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQ 219
Query: 404 HDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXX 463
+AL + EM + D + ++LP F++ + + +HGY
Sbjct: 220 SGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYI 279
Query: 464 ETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLS 523
+SL+ YAK IE + ++F + +D I+WNS+++ Y ++G + + L+ QM +
Sbjct: 280 GSSLVDMYAKSARIEDSERVFS--RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTA 337
Query: 524 NVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDE 583
VKP V F ++ AC + + GK++ ++ G+ + + +VD+ + G I
Sbjct: 338 KVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR-GGFGSNIFIASALVDMYSKCGNIKA 396
Query: 584 ASKIIE 589
A KI +
Sbjct: 397 ARKIFD 402
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 133/281 (47%), Gaps = 11/281 (3%)
Query: 28 FTTSSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
FT SS+L + ++ + ++IH G+ + + S L+D Y K S++VF
Sbjct: 243 FTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSR 302
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQG 143
D + +++++ Q G + + L L+++MV + P + S V+ +C ++ G
Sbjct: 303 LYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLG 362
Query: 144 KMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFES 202
K +H +++ G + + ++LV++Y K G + A + + M+V + W +I
Sbjct: 363 KQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALH 422
Query: 203 GKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQA-LHSLIIVSNLCGELTV 261
G E LF M+++ ++PN + + +L + + L+ +S+ V L EL
Sbjct: 423 GHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEH 482
Query: 262 NTALLSMYVKLGSLKDARLMFEKM---PRNDLVVWNIMVSA 299
A+ + + G L++A KM P VW+ ++S+
Sbjct: 483 YAAVADLLGRAGKLEEAYNFISKMCVEPTGS--VWSTLLSS 521
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 123/290 (42%), Gaps = 36/290 (12%)
Query: 332 ISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTV 391
I + T++K KQ+HA IR S S + +I +Y+ L+ A +F + V
Sbjct: 12 IKNPTRIKSKSQAKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLHEALLLFKTLKSPPV 70
Query: 392 VSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGY 451
++W ++I+ +AL+ F+EM+ G D + ++L + + L + +HG+
Sbjct: 71 LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130
Query: 452 XXXXXXXXXXXXETSLLASYAK---------CGCI--EMARKLFDEGKSS---------- 490
+L+ YAK G + EM ++ + G
Sbjct: 131 IVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF 190
Query: 491 -------------HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLT 537
KD++++N++I+ Y++ G + + +M +++KPD T +L
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP 250
Query: 538 ACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKI 587
V KGKEI ++ G + +VD+ ++ +I+++ ++
Sbjct: 251 IFSEYVDVIKGKEIHGYVIR-KGIDSDVYIGSSLVDMYAKSARIEDSERV 299
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 297 bits (761), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/564 (31%), Positives = 289/564 (51%), Gaps = 34/564 (6%)
Query: 130 FVLRSCFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVEL----YEKNGFLNAHEP----- 180
F+L+ C SV+ Q + + AQ++ ++ + + VEL Y F EP
Sbjct: 42 FLLKKCISVN--QLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSF 99
Query: 181 ---LEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDL 237
+ G++ T WN+ E L+ RM+ ++P+ T + + L
Sbjct: 100 NYMIRGLTNT----WNDH----------EAALSLYRRMKFSGLKPDKFTYNFVFIACAKL 145
Query: 238 HLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMV 297
+ +G+++HS + L ++ +N +L+ MY K G + AR +F+++ D V WN M+
Sbjct: 146 EEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMI 205
Query: 298 SAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSD 357
S Y+ G K++++L M G PD T + + + + L G+ + I
Sbjct: 206 SGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIG 265
Query: 358 YQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEM 417
+ + LI MY C L+SARR+F+ + K V+W+AMI ++ + + EA LF EM
Sbjct: 266 LSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM 325
Query: 418 KLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCI 477
+ G D + +L +GAL + + + T L+ Y KCG +
Sbjct: 326 EKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRV 385
Query: 478 EMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLT 537
E A ++F+ K+ WN+MI+AY+ G + L+++M +V P +TF+G+L+
Sbjct: 386 EEALRVFE--AMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLS 440
Query: 538 ACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDA 597
ACV++GLV +G F EM ++G P EH+ ++DLL RAG +DEA + +E P D
Sbjct: 441 ACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDE 500
Query: 598 RVYGPLLSACKMHSDPRLAEVAAQKLINM-EPKNAGNYVLLSNIYAAAGKWDKVAKMRSF 656
+ +L AC D + E A + L+ M E KNAGNYV+ SN+ A WD+ AKMR+
Sbjct: 501 IMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRAL 560
Query: 657 LRDRGLKKTPGCSWLESNGQVHEF 680
+RDRG+ KTPGCSW+E G++ EF
Sbjct: 561 MRDRGVVKTPGCSWIEIEGELMEF 584
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 211/421 (50%), Gaps = 11/421 (2%)
Query: 33 LLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVI 92
LL C L+QI A+ LH + + + L K ++ G S +F TE P+
Sbjct: 43 LLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVE----LGDFNYSSFLFSVTEEPNHYS 98
Query: 93 YSAILRNLSQ-FGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQI 150
++ ++R L+ + +HE L LY+ M + PD+ + +FV +C + G+ VH+ +
Sbjct: 99 FNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSL 158
Query: 151 VKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECF 209
K+G++ + +SL+ +Y K G + A + + ++ + WN+MIS E+G ++
Sbjct: 159 FKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAM 218
Query: 210 QLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMY 269
LF +M +E +P+ T++++L + L L+ G+ L + I + + + L+SMY
Sbjct: 219 DLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMY 278
Query: 270 VKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAI 329
K G L AR +F +M + D V W M++ Y+ NG E+ +L + M ++GV PD T
Sbjct: 279 GKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLS 338
Query: 330 PAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDK 389
+S+ + E GKQ+ H + + V L+DMY C + A R+F+ + K
Sbjct: 339 TVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVK 398
Query: 390 TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHY-VRYL 448
+W+AMI A+A EAL LF M + + + F I +L G +H RY
Sbjct: 399 NEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDITF---IGVLSACVHAGLVHQGCRYF 455
Query: 449 H 449
H
Sbjct: 456 H 456
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 297 bits (761), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 253/429 (58%), Gaps = 7/429 (1%)
Query: 265 LLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPD 324
L++MYVK L DA +F++MP+ +++ W M+SAY+ +++LEL+ M+R VRP+
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 325 MFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFD 384
++T + S + + +H +I+ G + V V +ALID+++ A +FD
Sbjct: 162 VYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD 218
Query: 385 LITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHY 444
+ + W+++I A + + AL LF MK G + + ++L + L
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278
Query: 445 VRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAY 504
+ + +L+ Y KCG +E A ++F++ K +D+I W++MIS
Sbjct: 279 --GMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK--ERDVITWSTMISGL 334
Query: 505 SKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPS 564
+++G + +L+ +MK S KP+ +T +G+L AC ++GL++ G F+ M LYG P
Sbjct: 335 AQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPV 394
Query: 565 QEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLI 624
+EH+ CM+DLLG+AG++D+A K++ + DA + LL AC++ + LAE AA+K+I
Sbjct: 395 REHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVI 454
Query: 625 NMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVAD 684
++P++AG Y LLSNIYA + KWD V ++R+ +RDRG+KK PGCSW+E N Q+H F + D
Sbjct: 455 ALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGD 514
Query: 685 QSHPRSVDI 693
SHP+ V++
Sbjct: 515 NSHPQIVEV 523
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 188/391 (48%), Gaps = 17/391 (4%)
Query: 120 SMYPDEESCSFVLRSCFS--VSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN- 176
++ D + S +++ C S HE G ++ + G + N L+ +Y K LN
Sbjct: 56 GLWADSATYSELIKCCISNRAVHE-GNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLND 114
Query: 177 AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVD 236
AH+ + M + W MIS + ++ +L M ++N++PN T ++LRS
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG 174
Query: 237 LHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIM 296
+ +++ LH II L ++ V +AL+ ++ KLG +DA +F++M D +VWN +
Sbjct: 175 MSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231
Query: 297 VSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGS 356
+ +A N +LEL M R+G + T + + T L E G Q H H+++
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQ 291
Query: 357 DYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIE 416
D + ++NAL+DMY C L A R+F+ + ++ V++WS MI A + EAL LF
Sbjct: 292 D--LILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER 349
Query: 417 MKLCGTRVDFIIVINILPTFAKIGAL----HYVRYLHGYXXXXXXXXXXXXETSLLASYA 472
MK GT+ ++I ++ +L + G L +Y R + LL
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLL---G 406
Query: 473 KCGCIEMARKLFDEGKSSHKDIIAWNSMISA 503
K G ++ A KL +E D + W +++ A
Sbjct: 407 KAGKLDDAVKLLNE-MECEPDAVTWRTLLGA 436
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 192/398 (48%), Gaps = 42/398 (10%)
Query: 29 TTSSLLDLCTKPQHLQQ---IHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFT 85
T S L+ C + + + I + +G L + L++ Y KF L + ++F
Sbjct: 63 TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQM 122
Query: 86 ENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKM 145
+ + ++ ++ S+ H+K L L M+ ++ P+ + S VLRSC +S +M
Sbjct: 123 PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMS--DVRM 180
Query: 146 VHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSV------TELAYWNNMISQA 199
+H I+K G+++ VR++L++++ K G EP + +SV + WN++I
Sbjct: 181 LHCGIIKEGLESDVFVRSALIDVFAKLG-----EPEDALSVFDEMVTGDAIVWNSIIGGF 235
Query: 200 FESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGEL 259
++ + + +LF RM++ T+ ++LR+ L LL++G H I+ + +L
Sbjct: 236 AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDL 293
Query: 260 TVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRS 319
+N AL+ MY K GSL+DA +F +M D++ W+ M+S A NG +E+L+L M S
Sbjct: 294 ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSS 353
Query: 320 GVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSV------------HNALI 367
G +P+ T + + + + HA ++ +G Y S+ + +I
Sbjct: 354 GTKPNYITIVGVLFACS-----------HAGLLEDGWYYFRSMKKLYGIDPVREHYGCMI 402
Query: 368 DMYSACNGLNSARRIF-DLITDKTVVSWSAMIKAHAVH 404
D+ L+ A ++ ++ + V+W ++ A V
Sbjct: 403 DLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQ 440
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 132/282 (46%), Gaps = 18/282 (6%)
Query: 28 FTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTEN 87
+T SS+L C ++ +H GL + + S L+D + K G P + VF
Sbjct: 163 YTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVT 222
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVS-HEQGKMV 146
D++++++I+ +Q + L L+K M ++ + + VLR+C ++ E G
Sbjct: 223 GDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQA 282
Query: 147 HAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKM 205
H IVK D ++ N+LV++Y K G L +A M ++ W+ MIS ++G
Sbjct: 283 HVHIVKYDQDL--ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYS 340
Query: 206 EECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIG-------QALHSLIIVSNLCGE 258
+E +LF RM+ +PN IT++ +L + LL+ G + L+ + V G
Sbjct: 341 QEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYG- 399
Query: 259 LTVNTALLSMYVKLGSLKDA-RLMFEKMPRNDLVVWNIMVSA 299
++ + K G L DA +L+ E D V W ++ A
Sbjct: 400 -----CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 283/522 (54%), Gaps = 15/522 (2%)
Query: 187 TELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQAL 246
T++ WN++I+ SG E FS MRK ++ P + +++ L + G+
Sbjct: 39 TDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQT 98
Query: 247 HSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCP 306
H V ++ V++AL+ MY G L+DAR +F+++P+ ++V W M+ Y NG
Sbjct: 99 HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNA 158
Query: 307 KESLELVYCMV------RSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQV 360
+++ L ++ + D + IS+ +++ + +H+ VI+ G D V
Sbjct: 159 LDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGV 218
Query: 361 SVHNALIDMYSACN--GLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMK 418
SV N L+D Y+ G+ AR+IFD I DK VS+++++ +A EA +F +
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF--RR 276
Query: 419 LCGTRV---DFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCG 475
L +V + I + +L + GAL + +H TS++ Y KCG
Sbjct: 277 LVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCG 336
Query: 476 CIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGL 535
+E ARK FD K +K++ +W +MI+ Y HG + EL+ M S V+P+ +TF+ +
Sbjct: 337 RVETARKAFDRMK--NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394
Query: 536 LTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNS 595
L AC ++GL +G F M +G +P EH+ CMVDLLGRAG + +A +I+ + +
Sbjct: 395 LAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKP 454
Query: 596 DARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRS 655
D+ ++ LL+AC++H + LAE++ +L ++ N G Y+LLS+IYA AG+W V ++R
Sbjct: 455 DSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRM 514
Query: 656 FLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
+++RGL K PG S LE NG+VH F + D+ HP+ IY L
Sbjct: 515 IMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFL 556
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 210/469 (44%), Gaps = 50/469 (10%)
Query: 84 FTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSV-SHEQ 142
+ + D +++++ +L++ G+ + L + M + S+YP S +++C S+
Sbjct: 35 YVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFS 94
Query: 143 GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFE 201
GK H Q G + V ++L+ +Y G L +A + + + + W +MI
Sbjct: 95 GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 202 SGKMEECFQLFSRMR-KENIQP-----NSITVINLLRSTVDLHLLKIGQALHSLIIVSNL 255
+G + LF + EN +S+ +++++ + + + +++HS +I
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214
Query: 256 CGELTVNTALLSMYVK--LGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELV 313
++V LL Y K G + AR +F+++ D V +N ++S YA +G E+ E+
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 314 YCMVRSGVRPDMFTAIPAISSITQLKHT---EWGKQMHAHVIRNGSDYQVSVHNALIDMY 370
+V++ V F AI + + + H+ GK +H VIR G + V V ++IDMY
Sbjct: 275 RRLVKNKVVT--FNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMY 332
Query: 371 SACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVI 430
C + +AR+ FD + +K V SW+AMI + +H +AL LF M G R ++I +
Sbjct: 333 CKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFV 392
Query: 431 NILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSS 490
++L + G LH + G+ E L GC
Sbjct: 393 SVLAACSHAG-LH----VEGWRWFNAMKGRFGVEPGL----EHYGC-------------- 429
Query: 491 HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTAC 539
M+ + G + ++L +MK+ KPD + + LL AC
Sbjct: 430 ---------MVDLLGRAGFLQKAYDLIQRMKM---KPDSIIWSSLLAAC 466
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 190/390 (48%), Gaps = 23/390 (5%)
Query: 31 SSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDS 90
SSL D+ + +Q H + F+ G + +SS L+ Y+ G ++KVF +
Sbjct: 87 SSLFDIFSG----KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 91 VIYSAILRNLSQFGEHEKTLFLYKEMV------EKSMYPDEESCSFVLRSCFSVSHEQ-G 143
V +++++R G + L+K+++ + +M+ D V+ +C V +
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT 202
Query: 144 KMVHAQIVKLGMDAFDLVRNSLVELYEK---NGFLNAHEPLEGMSVTELAYWNNMISQAF 200
+ +H+ ++K G D V N+L++ Y K G A + + + + +N+++S
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYA 262
Query: 201 ESGKMEECFQLFSRMRKENIQP-NSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGEL 259
+SG E F++F R+ K + N+IT+ +L + L+IG+ +H +I L ++
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 260 TVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRS 319
V T+++ MY K G ++ AR F++M ++ W M++ Y +G ++LEL M+ S
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 320 GVRPDMFTAIPAISSITQLK-HTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNS 378
GVRP+ T + +++ + H E + +A R G + + + ++D+ L
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQK 442
Query: 379 ARRIFDLITDKTV----VSWSAMIKAHAVH 404
A +DLI + + WS+++ A +H
Sbjct: 443 A---YDLIQRMKMKPDSIIWSSLLAACRIH 469
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 182/373 (48%), Gaps = 25/373 (6%)
Query: 285 MPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWG 344
+ + D+ WN +++ A +G E+L M + + P + AI + + L G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 345 KQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVH 404
KQ H G + V +ALI MYS C L AR++FD I + +VSW++MI+ + ++
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 405 DQCLEALSLFIEMKLCGTR------VDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXX 458
L+A+SLF ++ + +D + +++++ +++ A +H +
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 459 XXXXXETSLLASYAKC--GCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFEL 516
+LL +YAK G + +ARK+FD+ KD +++NS++S Y++ G + FE+
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQ--IVDKDRVSYNSIMSVYAQSGMSNEAFEV 273
Query: 517 YNQM-KLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLL 575
+ ++ K V + +T +L A +SG + GK I +++ + G + ++D+
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM-GLEDDVIVGTSIIDMY 332
Query: 576 GRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPK--NAG- 632
+ G+++ A K + + N + R + +++ MH A K + + P ++G
Sbjct: 333 CKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHGH-------AAKALELFPAMIDSGV 384
Query: 633 --NYVLLSNIYAA 643
NY+ ++ AA
Sbjct: 385 RPNYITFVSVLAA 397
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 296 bits (759), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 303/548 (55%), Gaps = 44/548 (8%)
Query: 189 LAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHS 248
L +N M+ + + LF +R + + P++ T+ +L+S L + G+ +H
Sbjct: 11 LLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHG 70
Query: 249 LIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKE 308
+ + L + V+ +L+ MY LG ++ +F++MP+ D+V WN ++S+Y GNG ++
Sbjct: 71 YAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFED 130
Query: 309 SLELVYCMVR-SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVH--NA 365
++ + M + S ++ D T + +S+ + LK+ E G++++ V+ +++++SV NA
Sbjct: 131 AIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV---TEFEMSVRIGNA 187
Query: 366 LIDMYSACNGLNSARRIFDLITDKTV-------------------------------VSW 394
L+DM+ C L+ AR +FD + DK V V W
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLW 247
Query: 395 SAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXX 454
+AM+ + ++ EAL LF M+ G R D +++++L A+ GAL +++HGY
Sbjct: 248 TAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINE 307
Query: 455 XXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCF 514
T+L+ YAKCGCIE A ++F E K +D +W S+I + +G +
Sbjct: 308 NRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK--ERDTASWTSLIYGLAMNGMSGRAL 365
Query: 515 ELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDL 574
+LY +M+ V+ D +TF+ +LTAC + G V +G++IF M + + QP EH +C++DL
Sbjct: 366 DLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDL 425
Query: 575 LGRAGQIDEASKIIETVPLNSDAR---VYGPLLSACKMHSDPRLAEVAAQKLINMEPKNA 631
L RAG +DEA ++I+ + SD VY LLSA + + + ++AE A+KL +E ++
Sbjct: 426 LCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDS 485
Query: 632 GNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQ--SHPR 689
+ LL+++YA+A +W+ V +R ++D G++K PGCS +E +G HEF V D SHP+
Sbjct: 486 SAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPK 545
Query: 690 SVDIYSIL 697
+I S+L
Sbjct: 546 MDEINSML 553
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 217/459 (47%), Gaps = 36/459 (7%)
Query: 86 ENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHE-QGK 144
+ P ++Y+ +L++L+ K L L+ E+ + +YPD + VL+S + +G+
Sbjct: 7 QTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGE 66
Query: 145 MVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESG 203
VH VK G++ V NSL+ +Y G + H+ + M ++ WN +IS +G
Sbjct: 67 KVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNG 126
Query: 204 KMEECFQLFSRMRKE-NIQPNSITVINLLRSTVDLHLLKIGQALHSLII--------VSN 254
+ E+ +F RM +E N++ + T+++ L + L L+IG+ ++ ++ + N
Sbjct: 127 RFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN 186
Query: 255 L-------CGELTVN---------------TALLSMYVKLGSLKDARLMFEKMPRNDLVV 292
CG L T+++ YV G + +AR++FE+ P D+V+
Sbjct: 187 ALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVL 246
Query: 293 WNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVI 352
W M++ Y E+LEL CM +G+RPD F + ++ Q E GK +H ++
Sbjct: 247 WTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIN 306
Query: 353 RNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALS 412
N V AL+DMY+ C + +A +F I ++ SW+++I A++ AL
Sbjct: 307 ENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALD 366
Query: 413 LFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYL-HGYXXXXXXXXXXXXETSLLASY 471
L+ EM+ G R+D I + +L G + R + H + L+
Sbjct: 367 LYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLL 426
Query: 472 AKCGCIEMARKLFDE--GKSSHKDIIAWNSMISAYSKHG 508
+ G ++ A +L D+ G+S + + S++SA +G
Sbjct: 427 CRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYG 465
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 43/389 (11%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQF 103
+++H GL +S +S+ LM Y G ++ KVF D V ++ ++ +
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 104 GEHEKTLFLYKEMVEKS-MYPDEESCSFVLRSCFSVSHEQGKMVHAQIVKLGMDAFDL-- 160
G E + ++K M ++S + DE + L +C ++ + + + +I + + F++
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLE---IGERIYRFVVTEFEMSV 182
Query: 161 -VRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSR---- 214
+ N+LV+++ K G L+ A + M + W +M+ +G+++E LF R
Sbjct: 183 RIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 215 ---------------------------MRKENIQPNSITVINLLRSTVDLHLLKIGQALH 247
M+ I+P++ +++LL L+ G+ +H
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIH 302
Query: 248 SLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPK 307
I + + + V TAL+ MY K G ++ A +F ++ D W ++ A NG
Sbjct: 303 GYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSG 362
Query: 308 ESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQM-HAHVIRNGSDYQVSVHNAL 366
+L+L Y M GVR D T + +++ G+++ H+ R+ + + L
Sbjct: 363 RALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCL 422
Query: 367 IDMYSACNGLNSARRIFDLI---TDKTVV 392
ID+ L+ A + D + +D+T+V
Sbjct: 423 IDLLCRAGLLDEAEELIDKMRGESDETLV 451
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 105/208 (50%), Gaps = 5/208 (2%)
Query: 385 LITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHY 444
L+ +++ ++ M+K+ A + L+LF E++ G D + +L + ++ +
Sbjct: 5 LLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 445 VRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAY 504
+HGY SL+ YA G IE+ K+FDE +D+++WN +IS+Y
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDE--MPQRDVVSWNGLISSY 122
Query: 505 SKHGEWFQCFELYNQM-KLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQP 563
+G + ++ +M + SN+K D+ T + L+AC ++ G+ I++ +V ++
Sbjct: 123 VGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT--EFEM 180
Query: 564 SQEHHACMVDLLGRAGQIDEASKIIETV 591
S +VD+ + G +D+A + +++
Sbjct: 181 SVRIGNALVDMFCKCGCLDKARAVFDSM 208
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 295 bits (756), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 185/589 (31%), Positives = 293/589 (49%), Gaps = 47/589 (7%)
Query: 146 VHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTELAYWNNMISQAFE--SG 203
+H I+K + +F SL +K F HE +G V E N +A + G
Sbjct: 12 LHGFILKRNLSSF---HASLKRFSDKKFFNPNHE--DGGVVVERLCRANRFGEAIDVLCG 66
Query: 204 K--MEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTV 261
+ + E QL R +K P + T NL++ L+ G+ +H I S + +
Sbjct: 67 QKLLREAVQLLGRAKK----PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVI 122
Query: 262 NTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGC---------------- 305
LL MY K GSL DAR +F++MP DL WN+MV+ YA G
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDS 182
Query: 306 ---------------PKESLELVYCMVR-SGVRPDMFTAIPAISSITQLKHTEWGKQMHA 349
P+E+L L M R RP++FT A+++ +K GK++H
Sbjct: 183 YSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHG 242
Query: 350 HVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLE 409
H++R G D + ++L+DMY C ++ AR IFD I +K VVSW++MI + + E
Sbjct: 243 HIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWRE 302
Query: 410 ALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLA 469
SLF E+ R + +L A + + +HGY +SL+
Sbjct: 303 GFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVD 362
Query: 470 SYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQ 529
Y KCG IE A+ + D D+++W S+I +++G+ + + ++ + S KPD
Sbjct: 363 MYTKCGNIESAKHVVD--GCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDH 420
Query: 530 VTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIE 589
VTF+ +L+AC ++GLV+KG E F + + + + +H+ C+VDLL R+G+ ++ +I
Sbjct: 421 VTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVIS 480
Query: 590 TVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDK 649
+P+ ++ +L C + + LAE AAQ+L +EP+N YV ++NIYAAAGKW++
Sbjct: 481 EMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEE 540
Query: 650 VAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILK 698
KMR +++ G+ K PG SW E + H F AD SHP I L+
Sbjct: 541 EGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLR 589
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 166/353 (47%), Gaps = 37/353 (10%)
Query: 29 TTSSLLDLCTKPQHLQQ---IHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFT 85
T +L+ +C++ + L++ +H G + ++L+ Y K G ++KVF
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 86 ENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYP-----------DEESCSFVLRS 134
N D ++ ++ ++ G E+ L+ EM EK Y D+ + VL S
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS 206
Query: 135 -----------CFSVSH-----------EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKN 172
F+VS +GK +H IV+ G+D+ +++ +SL+++Y K
Sbjct: 207 LMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 266
Query: 173 GFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLL 231
G ++ A + + ++ W +MI + F+S + E F LFS + +PN T +L
Sbjct: 267 GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVL 326
Query: 232 RSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLV 291
+ DL ++G+ +H + +++L+ MY K G+++ A+ + + P+ DLV
Sbjct: 327 NACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLV 386
Query: 292 VWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWG 344
W ++ A NG P E+L+ +++SG +PD T + +S+ T E G
Sbjct: 387 SWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKG 439
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 118/246 (47%), Gaps = 3/246 (1%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQF 103
++IH GL + L S LMD Y K G ++ +F D V +++++ +
Sbjct: 238 KEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKS 297
Query: 104 GEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQIVKLGMDAFDLVR 162
+ L+ E+V P+E + + VL +C ++ E+ GK VH + ++G D +
Sbjct: 298 SRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFAS 357
Query: 163 NSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQ 221
+SLV++Y K G + +A ++G +L W ++I ++G+ +E + F + K +
Sbjct: 358 SSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTK 417
Query: 222 PNSITVINLLRSTVDLHLLKIG-QALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARL 280
P+ +T +N+L + L++ G + +S+ L T L+ + + G + +
Sbjct: 418 PDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKS 477
Query: 281 MFEKMP 286
+ +MP
Sbjct: 478 VISEMP 483
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 295 bits (756), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 172/568 (30%), Positives = 290/568 (51%), Gaps = 34/568 (5%)
Query: 163 NSLVELYEKNGFLNAHEP-LEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKE-NI 220
N+L+ Y K G ++ E E + + WN +I SG + + ++ M ++ +
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 221 QPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARL 280
+T++ +L+ + + +G+ +H +I L V + LL MY +G + DA+
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 281 MFEKMP-RN-----------------------------DLVVWNIMVSAYAGNGCPKESL 310
+F + RN D V W M+ A NG KE++
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAI 255
Query: 311 ELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMY 370
E M G++ D + + + L GKQ+HA +IR + V +ALIDMY
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315
Query: 371 SACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVI 430
C L+ A+ +FD + K VVSW+AM+ + + EA+ +F++M+ G D +
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375
Query: 431 NILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSS 490
+ A + +L HG SL+ Y KCG I+ + +LF+E +
Sbjct: 376 QAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNE--MN 433
Query: 491 HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKE 550
+D ++W +M+SAY++ G + +L+++M +KPD VT G+++AC +GLV+KG+
Sbjct: 434 VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQR 493
Query: 551 IFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMH 610
FK M YG PS H++CM+DL R+G+++EA + I +P DA + LLSAC+
Sbjct: 494 YFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNK 553
Query: 611 SDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSW 670
+ + + AA+ LI ++P + Y LLS+IYA+ GKWD VA++R +R++ +KK PG SW
Sbjct: 554 GNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSW 613
Query: 671 LESNGQVHEFRVADQSHPRSVDIYSILK 698
++ G++H F D+S P IY+ L+
Sbjct: 614 IKWKGKLHSFSADDESSPYLDQIYAKLE 641
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/538 (22%), Positives = 237/538 (44%), Gaps = 74/538 (13%)
Query: 63 SKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEK-SM 121
+ L+ Y+K GL + F + D V ++ ++ S G + Y M+ S
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 122 YPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHE 179
+ +L+ S H GK +H Q++KLG +++ LV + L+ +Y G + +A +
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 180 PLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENI------------------- 220
G+ +N+++ G +E+ QLF M K+++
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAI 255
Query: 221 -----------QPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMY 269
+ + ++L + L + G+ +H+ II +N + V +AL+ MY
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315
Query: 270 VKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAI 329
K L A+ +F++M + ++V W MV Y G +E++++ M RSG+ PD +T
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375
Query: 330 PAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDK 389
AIS+ + E G Q H I +G + V+V N+L+ +Y C ++ + R+F+ + +
Sbjct: 376 QAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435
Query: 390 TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLH 449
VSW+AM+ A+A + +E + LF +M G + D + +
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTL-------------------- 475
Query: 450 GYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSH---KDIIAWNSMISAYSK 506
T ++++ ++ G +E ++ F S + I ++ MI +S+
Sbjct: 476 ---------------TGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSR 520
Query: 507 HGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPS 564
G + N M PD + + LL+AC N G ++ GK + +++L + P+
Sbjct: 521 SGRLEEAMRFINGMPFP---PDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPA 575
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 123/265 (46%), Gaps = 4/265 (1%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQF 103
+QIHA + + S L+D Y K ++ VF + + V ++A++ Q
Sbjct: 290 KQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQT 349
Query: 104 GEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDLVR 162
G E+ + ++ +M + PD + + +C +VS E+G H + + G+ + V
Sbjct: 350 GRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVS 409
Query: 163 NSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQ 221
NSLV LY K G ++ L M+V + W M+S + G+ E QLF +M + ++
Sbjct: 410 NSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLK 469
Query: 222 PNSITVINLLRSTVDLHLLKIGQALHSLIIVS-NLCGELTVNTALLSMYVKLGSLKDARL 280
P+ +T+ ++ + L++ GQ L+ + + + ++ ++ + G L++A
Sbjct: 470 PDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMR 529
Query: 281 MFEKMP-RNDLVVWNIMVSAYAGNG 304
MP D + W ++SA G
Sbjct: 530 FINGMPFPPDAIGWTTLLSACRNKG 554
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 295 bits (754), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/519 (30%), Positives = 284/519 (54%), Gaps = 8/519 (1%)
Query: 180 PLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHL 239
P G+SV +N+MI +E +L+ +M E IQP+S T +++ + +
Sbjct: 77 PQRGVSV-----YNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLV 131
Query: 240 LKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSA 299
L+ G+A+ + ++ V +++L++Y+K G + +A ++F KM + D++ W MV+
Sbjct: 132 LEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTG 191
Query: 300 YAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQ 359
+A G +++E M G D + + + L T+ G+ +H ++ R G
Sbjct: 192 FAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMN 251
Query: 360 VSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKL 419
V V +L+DMY+ + A R+F + KT VSW ++I A + +A +EM+
Sbjct: 252 VVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQS 311
Query: 420 CGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEM 479
G + D + ++ +L +++G+L R +H Y T+L+ Y+KCG +
Sbjct: 312 LGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTA-TALMDMYSKCGALSS 370
Query: 480 ARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTAC 539
+R++F+ KD++ WN+MIS Y HG + L+ +M SN++PD TF LL+A
Sbjct: 371 SREIFEH--VGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSAL 428
Query: 540 VNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARV 599
+SGLV++G+ F M++ Y QPS++H+ C++DLL RAG+++EA +I + L++ +
Sbjct: 429 SHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPI 488
Query: 600 YGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRD 659
+ LLS C H + + ++AA K++ + P + G L+SN +A A KW +VAK+R +R+
Sbjct: 489 WVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRN 548
Query: 660 RGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILK 698
++K PG S +E NG++ F + D SH + +L+
Sbjct: 549 GAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLR 587
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 190/398 (47%), Gaps = 8/398 (2%)
Query: 246 LHSLII-VSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNG 304
+H+ +I NL +++ L++ ++G + AR +F+++P+ + V+N M+ Y+
Sbjct: 36 IHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGK 95
Query: 305 CPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHN 364
P E L L M+ ++PD T I + E G+ + + G V V +
Sbjct: 96 NPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCS 155
Query: 365 ALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRV 424
+++++Y C ++ A +F + + V+ W+ M+ A + L+A+ + EM+ G
Sbjct: 156 SVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGR 215
Query: 425 DFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLF 484
D ++++ +L +G R +HGY ETSL+ YAK G IE+A ++F
Sbjct: 216 DRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVF 275
Query: 485 DEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGL 544
+ K ++W S+IS ++++G + FE +M+ +PD VT +G+L AC G
Sbjct: 276 S--RMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGS 333
Query: 545 VDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLL 604
+ G+ + + L + + ++D+ + G + + +I E V D + ++
Sbjct: 334 LKTGRLVHCYI--LKRHVLDRVTATALMDMYSKCGALSSSREIFEHVG-RKDLVCWNTMI 390
Query: 605 SACKMHSDPRLAEVAAQKLI--NMEPKNAGNYVLLSNI 640
S +H + + K+ N+EP +A LLS +
Sbjct: 391 SCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSAL 428
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 5/211 (2%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQF 103
+ +H + GL N + + L+D Y K G ++ +VF +V + +++ +Q
Sbjct: 237 RSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQN 296
Query: 104 GEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSV-SHEQGKMVHAQIVKLGMDAFDLVR 162
G K EM PD + VL +C V S + G++VH I+K D V
Sbjct: 297 GLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILK--RHVLDRVT 354
Query: 163 -NSLVELYEKNGFLNA-HEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENI 220
+L+++Y K G L++ E E + +L WN MIS G +E LF +M + NI
Sbjct: 355 ATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNI 414
Query: 221 QPNSITVINLLRSTVDLHLLKIGQALHSLII 251
+P+ T +LL + L++ GQ S++I
Sbjct: 415 EPDHATFASLLSALSHSGLVEQGQHWFSVMI 445
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 185/635 (29%), Positives = 313/635 (49%), Gaps = 53/635 (8%)
Query: 77 LSQKVFYFTENP--DSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRS 134
LS F NP +++ ++A++ + G + L+ EM + P+E + VLR
Sbjct: 75 LSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRM 134
Query: 135 CFS-VSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL------EGMSVT 187
C S V +G+ +H +K G D V N L+ +Y + ++ E L E +VT
Sbjct: 135 CTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVT 194
Query: 188 ELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALH 247
W +M++ ++G + + F +R+E Q N T ++L + + ++G +H
Sbjct: 195 ----WTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVH 250
Query: 248 SLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPK 307
I+ S + V +AL+ MY K ++ AR + E M +D+V WN M+ G
Sbjct: 251 CCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIG 310
Query: 308 ESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAH--VIRNGSDYQVSVHNA 365
E+L + M ++ D FT IP+I + L TE AH +++ G V+NA
Sbjct: 311 EALSMFGRMHERDMKIDDFT-IPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNA 369
Query: 366 LIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVD 425
L+DMY+ ++SA ++F+ + +K V+SW+A++ + + EAL LF M++ G D
Sbjct: 370 LVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPD 429
Query: 426 FIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFD 485
I+ ++L A++ L + + +HG SL+ Y KCG +E A +F+
Sbjct: 430 KIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFN 489
Query: 486 EGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLV 545
+ +D+I W +I Y+K+ GL+
Sbjct: 490 SMEI--RDLITWTCLIVGYAKN-----------------------------------GLL 512
Query: 546 DKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLS 605
+ + F M +YG P EH+ACM+DL GR+G + +++ + + DA V+ +L+
Sbjct: 513 EDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILA 572
Query: 606 ACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKT 665
A + H + E AA+ L+ +EP NA YV LSN+Y+AAG+ D+ A +R ++ R + K
Sbjct: 573 ASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKE 632
Query: 666 PGCSWLESNGQVHEFRVADQSHPRSVDIYSILKVM 700
PGCSW+E G+VH F D+ HPR V+IYS + M
Sbjct: 633 PGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEM 667
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 198/398 (49%), Gaps = 7/398 (1%)
Query: 28 FTTSSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
+T S+L +CT L +QIH G + ++ + L+ Y + ++ +F
Sbjct: 126 YTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFET 185
Query: 85 TEN-PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQ 142
E ++V ++++L SQ G K + ++++ + ++ + VL +C SVS
Sbjct: 186 MEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRV 245
Query: 143 GKMVHAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAFE 201
G VH IVK G V+++L+++Y K +A LEGM V ++ WN+MI
Sbjct: 246 GVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVR 305
Query: 202 SGKMEECFQLFSRMRKENIQPNSITVINLLRS-TVDLHLLKIGQALHSLIIVSNLCGELT 260
G + E +F RM + +++ + T+ ++L + +KI + H LI+ +
Sbjct: 306 QGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKL 365
Query: 261 VNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG 320
VN AL+ MY K G + A +FE M D++ W +V+ NG E+L+L M G
Sbjct: 366 VNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGG 425
Query: 321 VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSAR 380
+ PD +S+ +L E+G+Q+H + I++G +SV+N+L+ MY+ C L A
Sbjct: 426 ITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDAN 485
Query: 381 RIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMK 418
IF+ + + +++W+ +I +A + +A F M+
Sbjct: 486 VIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMR 523
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 143/290 (49%), Gaps = 37/290 (12%)
Query: 19 IVAPFQTRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLS 78
+ + F+T + S+L+D+ K + ++ AR L G+
Sbjct: 254 VKSGFKTNIYVQSALIDMYAKCREMES--ARALLEGM----------------------- 288
Query: 79 QKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSV 138
E D V +++++ + G + L ++ M E+ M D+ + +L +CF++
Sbjct: 289 -------EVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL-NCFAL 340
Query: 139 SHEQGKM---VHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNN 194
S + K+ H IVK G + LV N+LV++Y K G ++ A + EGM ++ W
Sbjct: 341 SRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTA 400
Query: 195 MISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSN 254
+++ +G +E +LF MR I P+ I ++L ++ +L LL+ GQ +H I S
Sbjct: 401 LVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSG 460
Query: 255 LCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNG 304
L+VN +L++MY K GSL+DA ++F M DL+ W ++ YA NG
Sbjct: 461 FPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG 510
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 155/333 (46%), Gaps = 4/333 (1%)
Query: 258 ELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMV 317
E T NT +++ Y L DA +F P + + WN ++S Y +G E+ L + M
Sbjct: 59 EFTWNTMIVA-YSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ 117
Query: 318 RSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLN 377
G++P+ +T + T L G+Q+H H I+ G D V+V N L+ MY+ C ++
Sbjct: 118 SDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRIS 177
Query: 378 SARRIFDLIT-DKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTF 436
A +F+ + +K V+W++M+ ++ + +A+ F +++ G + + ++L
Sbjct: 178 EAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTAC 237
Query: 437 AKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIA 496
A + A +H +++L+ YAKC +E AR L EG D+++
Sbjct: 238 ASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALL-EGMEV-DDVVS 295
Query: 497 WNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMV 556
WNSMI + G + ++ +M ++K D T +L S K ++
Sbjct: 296 WNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLI 355
Query: 557 DLYGYQPSQEHHACMVDLLGRAGQIDEASKIIE 589
GY + + +VD+ + G +D A K+ E
Sbjct: 356 VKTGYATYKLVNNALVDMYAKRGIMDSALKVFE 388
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 291 bits (746), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 165/533 (30%), Positives = 289/533 (54%), Gaps = 12/533 (2%)
Query: 145 MVHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESG 203
++H + G + +++ L++LY K G + +A + + +S ++ W MIS+ G
Sbjct: 33 LIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCG 92
Query: 204 KMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNT 263
+ LF M +E+++ N T ++L+S DL LK G +H + N G L V +
Sbjct: 93 YHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRS 152
Query: 264 ALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRP 323
ALLS+Y + G +++ARL F+ M DLV WN M+ Y N C S L M+ G +P
Sbjct: 153 ALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKP 212
Query: 324 DMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIF 383
D FT + + +K E ++H I+ G ++ +L++ Y C L +A ++
Sbjct: 213 DCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLH 272
Query: 384 DLITDKTVVSWSAMIKAHAVHDQCL-EALSLFIEMKLCGTRVDFIIVINILPTFAKIGAL 442
+ + ++S +A+I + + C +A +F +M T++D ++V ++L I ++
Sbjct: 273 EGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASV 332
Query: 443 HYVRYLHGYXXXXXXXX-XXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMI 501
R +HG+ SL+ YAK G IE A F+E K KD+ +W S+I
Sbjct: 333 TIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK--EKDVRSWTSLI 390
Query: 502 SAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGY 561
+ Y +HG + + +LYN+M+ +KP+ VTFL LL+AC ++G + G +I+ M++ +G
Sbjct: 391 AGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGI 450
Query: 562 QPSQEHHACMVDLLGRAGQIDEASKIIET----VPLNSDARVYGPLLSACKMHSDPRLAE 617
+ +EH +C++D+L R+G ++EA +I + V L+S +G L AC+ H + +L++
Sbjct: 451 EAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSS--TWGAFLDACRRHGNVQLSK 508
Query: 618 VAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRG-LKKTPGCS 669
VAA +L++MEP+ NY+ L+++YAA G WD R +++ G K PG S
Sbjct: 509 VAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYS 561
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 186/392 (47%), Gaps = 7/392 (1%)
Query: 34 LDLCTK---PQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDS 90
L LC+ + L IH +G N L L+D Y K G ++K+F D
Sbjct: 19 LKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDV 78
Query: 91 VIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQ 149
V ++A++ S+ G H L L+KEM + + ++ + VL+SC + ++G +H
Sbjct: 79 VSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGS 138
Query: 150 IVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEEC 208
+ K +VR++L+ LY + G + A + M +L WN MI + +
Sbjct: 139 VEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTS 198
Query: 209 FQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSM 268
F LF M E +P+ T +LLR+++ + L+I LH L I + +L++
Sbjct: 199 FSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNA 258
Query: 269 YVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYA-GNGCPKESLELVYCMVRSGVRPDMFT 327
YVK GSL +A + E + DL+ +++ ++ N C ++ ++ M+R + D
Sbjct: 259 YVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVV 318
Query: 328 AIPAISSITQLKHTEWGKQMHAHVIRNGS-DYQVSVHNALIDMYSACNGLNSARRIFDLI 386
+ T + G+Q+H +++ + V++ N+LIDMY+ + A F+ +
Sbjct: 319 VSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEM 378
Query: 387 TDKTVVSWSAMIKAHAVHDQCLEALSLFIEMK 418
+K V SW+++I + H +A+ L+ M+
Sbjct: 379 KEKDVRSWTSLIAGYGRHGNFEKAIDLYNRME 410
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 291 bits (746), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 159/519 (30%), Positives = 269/519 (51%), Gaps = 35/519 (6%)
Query: 211 LFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLII-VSNLCGELTVNTALLSMY 269
+ R+R + + + + +L++ + L G LH + ++ LC V T + MY
Sbjct: 98 FYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPF-VETGFMDMY 156
Query: 270 VKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAI 329
G + AR +F++M D+V WN M+ Y G E+ +L M S V PD
Sbjct: 157 ASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILC 216
Query: 330 PAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDM-------------------- 369
+S+ + + + + ++ +I N + AL+ M
Sbjct: 217 NIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR 276
Query: 370 -----------YSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMK 418
YS C L+ A+ IFD K +V W+ MI A+ D EAL +F EM
Sbjct: 277 NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC 336
Query: 419 LCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIE 478
G + D + + +++ A +G L +++H +L+ YAKCG ++
Sbjct: 337 CSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLD 396
Query: 479 MARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTA 538
R +F+ K +++++W+SMI+A S HGE L+ +MK NV+P++VTF+G+L
Sbjct: 397 ATRDVFE--KMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYG 454
Query: 539 CVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDAR 598
C +SGLV++GK+IF M D Y P EH+ CMVDL GRA + EA ++IE++P+ S+
Sbjct: 455 CSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVV 514
Query: 599 VYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLR 658
++G L+SAC++H + L + AA++++ +EP + G VL+SNIYA +W+ V +R +
Sbjct: 515 IWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVME 574
Query: 659 DRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
++ + K G S ++ NG+ HEF + D+ H +S +IY+ L
Sbjct: 575 EKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKL 613
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 172/370 (46%), Gaps = 35/370 (9%)
Query: 291 VVWNIMVSAYAGNGCPKESLELVYCMVRS-GVRPDMFTAIPAISSITQLKHTEWGKQMHA 349
+V+N + + + P+ ++ L Y +R G R D F+ +P + +++++ G ++H
Sbjct: 77 IVFNPFLRDLSRSSEPRATI-LFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHG 135
Query: 350 HVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLE 409
+ + V +DMY++C +N AR +FD ++ + VV+W+ MI+ + E
Sbjct: 136 VAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDE 195
Query: 410 ALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLA 469
A LF EMK D +I+ NI+ + G + Y R ++ + T+L+
Sbjct: 196 AFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVT 255
Query: 470 SYAKCGCIEMARKLFDE-----------------------------GKSSHKDIIAWNSM 500
YA GC++MAR+ F + ++ KD++ W +M
Sbjct: 256 MYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTM 315
Query: 501 ISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYG 560
ISAY + + ++ +M S +KPD V+ +++AC N G++DK K + + + G
Sbjct: 316 ISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWV-HSCIHVNG 374
Query: 561 YQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPR--LAEV 618
+ + ++++ + G +D + E +P + + +++A MH + L+
Sbjct: 375 LESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGEASDALSLF 433
Query: 619 AAQKLINMEP 628
A K N+EP
Sbjct: 434 ARMKQENVEP 443
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 176/384 (45%), Gaps = 41/384 (10%)
Query: 61 LSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKS 120
+ + MD Y G ++ VF + D V ++ ++ +FG ++ L++EM + +
Sbjct: 148 VETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSN 207
Query: 121 MYPDEESCSFVLRSC--------------FSVSHEQGKMVH--AQIVKL--GMDAFDLVR 162
+ PDE ++ +C F + ++ H +V + G D+ R
Sbjct: 208 VMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAR 267
Query: 163 --------------NSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEE 207
++V Y K G L+ A + +L W MIS ES +E
Sbjct: 268 EFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQE 327
Query: 208 CFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLS 267
++F M I+P+ +++ +++ + +L +L + +HS I V+ L EL++N AL++
Sbjct: 328 ALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALIN 387
Query: 268 MYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFT 327
MY K G L R +FEKMPR ++V W+ M++A + +G ++L L M + V P+ T
Sbjct: 388 MYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVT 447
Query: 328 AIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSV----HNALIDMYSACNGLNSARRIF 383
+ + + E GK++ A + +Y ++ + ++D++ N L A +
Sbjct: 448 FVGVLYGCSHSGLVEEGKKIFASMT---DEYNITPKLEHYGCMVDLFGRANLLREALEVI 504
Query: 384 D-LITDKTVVSWSAMIKAHAVHDQ 406
+ + VV W +++ A +H +
Sbjct: 505 ESMPVASNVVIWGSLMSACRIHGE 528
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 133/254 (52%), Gaps = 4/254 (1%)
Query: 50 FFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKT 109
FF +N +S+ ++ Y+K G +Q +F TE D V ++ ++ + ++
Sbjct: 269 FFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEA 328
Query: 110 LFLYKEMVEKSMYPDEESCSFVLRSCFSVS-HEQGKMVHAQIVKLGMDAFDLVRNSLVEL 168
L +++EM + PD S V+ +C ++ ++ K VH+ I G+++ + N+L+ +
Sbjct: 329 LRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINM 388
Query: 169 YEKNGFLNA-HEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITV 227
Y K G L+A + E M + W++MI+ G+ + LF+RM++EN++PN +T
Sbjct: 389 YAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTF 448
Query: 228 INLLRSTVDLHLLKIGQALH-SLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMP 286
+ +L L++ G+ + S+ N+ +L ++ ++ + L++A + E MP
Sbjct: 449 VGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMP 508
Query: 287 -RNDLVVWNIMVSA 299
+++V+W ++SA
Sbjct: 509 VASNVVIWGSLMSA 522
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/549 (32%), Positives = 282/549 (51%), Gaps = 42/549 (7%)
Query: 163 NSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQ 221
N LV Y KN + A E M + W M+ + G + E LF RM +
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP----E 138
Query: 222 PNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLM 281
N ++ + +D + + L+ ++ V ++ +T ++ + G + +ARL+
Sbjct: 139 RNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDV----VASTNMIGGLCREGRVDEARLI 194
Query: 282 FEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHT 341
F++M ++V W M++ Y N R V +F +P + ++
Sbjct: 195 FDEMRERNVVTWTTMITGYRQNN-------------RVDVARKLFEVMPEKTEVS----- 236
Query: 342 EWGKQMHAHV----IRNGSDY-------QVSVHNALIDMYSACNGLNSARRIFDLITDKT 390
W + + I + ++ V NA+I + ++ ARR+FDL+ D+
Sbjct: 237 -WTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRD 295
Query: 391 VVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHG 450
+W MIKA+ LEAL LF +M+ G R F +I+IL A + +L Y R +H
Sbjct: 296 NATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHA 355
Query: 451 YXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEW 510
+ + L+ Y KCG + A+ +FD + S KDII WNS+IS Y+ HG
Sbjct: 356 HLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFD--RFSSKDIIMWNSIISGYASHGLG 413
Query: 511 FQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHAC 570
+ +++++M S P++VT + +LTAC +G +++G EIF+ M + P+ EH++C
Sbjct: 414 EEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSC 473
Query: 571 MVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKN 630
VD+LGRAGQ+D+A ++IE++ + DA V+G LL ACK HS LAEVAA+KL EP N
Sbjct: 474 TVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDN 533
Query: 631 AGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEF-RVADQSHPR 689
AG YVLLS+I A+ KW VA +R +R + K PGCSW+E +VH F R ++HP
Sbjct: 534 AGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPE 593
Query: 690 SVDIYSILK 698
I +L+
Sbjct: 594 QAMILMMLE 602
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/382 (19%), Positives = 156/382 (40%), Gaps = 61/382 (15%)
Query: 177 AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVD 236
A + + + + WN+++S F +G +E QLF M + N+ + V +++ +
Sbjct: 36 ARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMI 95
Query: 237 LHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIM 296
+ + + + +VS TA++ Y++ G + +A +F +MP + V W +M
Sbjct: 96 VEARNVFELMPERNVVS--------WTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVM 147
Query: 297 VSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKH-TEWGKQMHAHVIRNG 355
+G ++ +L DM ++S + G+ A +I +
Sbjct: 148 FGGLIDDGRIDKARKLY----------DMMPVKDVVASTNMIGGLCREGRVDEARLIFDE 197
Query: 356 -SDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLF 414
+ V +I Y N ++ AR++F+++ +KT VSW++M+ + + + +A F
Sbjct: 198 MRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFF 257
Query: 415 IEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKC 474
++P I +++ + +
Sbjct: 258 ----------------EVMPMKPVIAC-----------------------NAMIVGFGEV 278
Query: 475 GCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLG 534
G I AR++FD +D W MI AY + G + +L+ QM+ V+P + +
Sbjct: 279 GEISKARRVFD--LMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLIS 336
Query: 535 LLTACVNSGLVDKGKEIFKEMV 556
+L+ C + G+++ +V
Sbjct: 337 ILSVCATLASLQYGRQVHAHLV 358
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 195/612 (31%), Positives = 307/612 (50%), Gaps = 69/612 (11%)
Query: 139 SHEQGKMVHAQIVKLGM--DAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTELAY----- 191
S Q K V AQI++ + D F + R L+ F +A E + + +L +
Sbjct: 46 SRNQFKQVLAQIMRFNLICDTFPMSR--LI-------FFSAITYPENLDLAKLLFLNFTP 96
Query: 192 ------WNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQA 245
+N MIS S ECF L+S M + + P+ T + L++++ L +K
Sbjct: 97 NPNVFVYNTMISAV--SSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVK---Q 151
Query: 246 LHSLIIVSNLCGELT--VNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGN 303
+H IIVS C L + +L+ Y++LG+ A +F +MP D+ +N+M+ YA
Sbjct: 152 IHCHIIVSG-CLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQ 210
Query: 304 GCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSV- 362
G E+L+L + MV G+ PD +T + + L GK +H + R G Y ++
Sbjct: 211 GFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLI 270
Query: 363 -HNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMI----------KAHAVHDQ----- 406
NAL+DMY C A+R FD + K + SW+ M+ A AV DQ
Sbjct: 271 LSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRD 330
Query: 407 ---------------CLE--ALSLFIEMKLC-GTRVDFIIVINILPTFAKIGALHYVRYL 448
C + LF EM + + D + +++++ A G L + R++
Sbjct: 331 LVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWV 390
Query: 449 HGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHG 508
HG ++L+ Y KCG IE A +F ++ KD+ W SMI+ + HG
Sbjct: 391 HGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFK--TATEKDVALWTSMITGLAFHG 448
Query: 509 EWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHH 568
Q +L+ +M+ V P+ VT L +LTAC +SGLV++G +F M D +G+ P EH+
Sbjct: 449 NGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHY 508
Query: 569 ACMVDLLGRAGQIDEASKIIE-TVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINME 627
+VDLL RAG+++EA I++ +P+ ++G +LSAC+ D AE+A +L+ +E
Sbjct: 509 GSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLE 568
Query: 628 PKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVAD-QS 686
P+ G YVLLSNIYA G+W K R + +RG+KKT G S + +H F A+ Q+
Sbjct: 569 PEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQN 628
Query: 687 HPRSVDIYSILK 698
HPR +I IL+
Sbjct: 629 HPRWTEIKRILQ 640
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 176/382 (46%), Gaps = 43/382 (11%)
Query: 42 HLQQIHARFFLHG-LHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNL 100
++QIH + G L + L + L+ Y + G G+++KVF +PD ++ ++
Sbjct: 148 EVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGY 207
Query: 101 SQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQIVKLG--MDA 157
++ G + L LY +MV + PDE + +L C +S + GK VH I + G +
Sbjct: 208 AKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSS 267
Query: 158 FDLVRNSLVELY---EKNGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSR 214
++ N+L+++Y +++G A + M ++ WN M+ G ME +F +
Sbjct: 268 NLILSNALLDMYFKCKESGL--AKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQ 325
Query: 215 MRK---------------------------------ENIQPNSITVINLLRSTVDLHLLK 241
M K E ++P+ +T+++L+ + L
Sbjct: 326 MPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELS 385
Query: 242 IGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYA 301
G+ +H L+I L G+ +++AL+ MY K G ++ A ++F+ D+ +W M++ A
Sbjct: 386 HGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLA 445
Query: 302 GNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVI-RNGSDYQV 360
+G +++L+L M GV P+ T + +++ + E G + H+ + G D +
Sbjct: 446 FHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPET 505
Query: 361 SVHNALIDMYSACNGLNSARRI 382
+ +L+D+ + A+ I
Sbjct: 506 EHYGSLVDLLCRAGRVEEAKDI 527
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 159/488 (32%), Positives = 264/488 (54%), Gaps = 34/488 (6%)
Query: 244 QALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGN 303
+ +++ II+ L + T ++ K+ + A +F ++ ++ ++N ++ AY N
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 304 GCPKESLELVYCMVRSGVR-PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSV 362
+ + + ++R PD FT S L GKQ+H H+ + G + V
Sbjct: 87 SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVT 146
Query: 363 HNALIDMYSACNGLNSARRIFD-------------------------------LITDKTV 391
NALIDMY + L A ++FD L+ DKT+
Sbjct: 147 ENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 206
Query: 392 VSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGY 451
VSW+AMI + +EA+ F EM+L G D I +I++LP+ A++G+L +++H Y
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLY 266
Query: 452 XXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWF 511
+L+ Y+KCG I A +LF G+ KD+I+W++MIS Y+ HG
Sbjct: 267 AERRGFLKQTGVCNALIEMYSKCGVISQAIQLF--GQMEGKDVISWSTMISGYAYHGNAH 324
Query: 512 QCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACM 571
E +N+M+ + VKP+ +TFLGLL+AC + G+ +G F M Y +P EH+ C+
Sbjct: 325 GAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCL 384
Query: 572 VDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNA 631
+D+L RAG+++ A +I +T+P+ D++++G LLS+C+ + +A VA L+ +EP++
Sbjct: 385 IDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDM 444
Query: 632 GNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSV 691
GNYVLL+NIYA GKW+ V+++R +R+ +KKTPG S +E N V EF D S P
Sbjct: 445 GNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWT 504
Query: 692 DIYSILKV 699
+I +L++
Sbjct: 505 EISIVLQL 512
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 188/413 (45%), Gaps = 53/413 (12%)
Query: 8 FHLLNIRKIPYIVAPFQTRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMD 67
FH IR++ PF R ++I+A +HGL Q+S + +K++D
Sbjct: 3 FH--GIREVENYFIPFLQR----------VKSRNEWKKINASIIIHGLSQSSFMVTKMVD 50
Query: 68 CYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSM-YPDEE 126
K + ++F NP+ +Y++I+R + + + +YK+++ KS PD
Sbjct: 51 FCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRF 110
Query: 127 SCSFVLRSCFSV-SHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGM 184
+ F+ +SC S+ S GK VH + K G + N+L+++Y K + ++AH+ + M
Sbjct: 111 TFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEM 170
Query: 185 SVTELAYWNNMISQAFESGKME-------------------------------ECFQLFS 213
++ WN+++S G+M+ E F
Sbjct: 171 YERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFR 230
Query: 214 RMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLG 273
M+ I+P+ I++I++L S L L++G+ +H + V AL+ MY K G
Sbjct: 231 EMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCG 290
Query: 274 SLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAIS 333
+ A +F +M D++ W+ M+S YA +G ++E M R+ V+P+ T + +S
Sbjct: 291 VISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLS 350
Query: 334 SITQLKHTEWGKQMHAHVIRNGSDYQVSV----HNALIDMYSACNGLNSARRI 382
+ + + + G + + ++R DYQ+ + LID+ + L A I
Sbjct: 351 ACSHVGMWQEGLR-YFDMMRQ--DYQIEPKIEHYGCLIDVLARAGKLERAVEI 400
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/268 (18%), Positives = 119/268 (44%), Gaps = 37/268 (13%)
Query: 316 MVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNG 375
M G+R IP + + EW K+++A +I +G + ++D
Sbjct: 1 MAFHGIREVENYFIPFLQRVKS--RNEW-KKINASIIIHGLSQSSFMVTKMVDFCDKIED 57
Query: 376 LNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRV-DFIIVINILP 434
++ A R+F+ +++ V ++++I+A+ + + + ++ ++ + D +
Sbjct: 58 MDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFK 117
Query: 435 TFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDI 494
+ A +G+ + + +HG+ E +L+ Y K + A K+FDE +D+
Sbjct: 118 SCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDE--MYERDV 175
Query: 495 IAWNSMISAYSKHGE-------------------------------WFQCFELYNQMKLS 523
I+WNS++S Y++ G+ + + + + +M+L+
Sbjct: 176 ISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLA 235
Query: 524 NVKPDQVTFLGLLTACVNSGLVDKGKEI 551
++PD+++ + +L +C G ++ GK I
Sbjct: 236 GIEPDEISLISVLPSCAQLGSLELGKWI 263
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 288 bits (738), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 199/698 (28%), Positives = 358/698 (51%), Gaps = 23/698 (3%)
Query: 20 VAPFQT-RFFTTSSLLDLCTKPQHLQQIHA-RFFLHGLHQNSS--LSSKLMDCYTK-FGL 74
APF +T SS L C + ++L+ A L QNSS + + LM+ Y
Sbjct: 99 TAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNA 158
Query: 75 PG-----LSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCS 129
P + +KVF + V ++ ++ + G + + + M+ + P S
Sbjct: 159 PDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFV 218
Query: 130 FVLRSC-FSVSHEQGKMVHAQIVKLGMDAFD--LVRNSLVELYEKNGFLNAHEPLEGMSV 186
V + S S ++ + + ++KLG + V +S + +Y + G + + + V
Sbjct: 219 NVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCV 278
Query: 187 TE-LAYWNNMISQAFESGKMEECFQLF-SRMRKENIQPNSITVINLLRSTVDLHLLKIGQ 244
+ WN MI ++ + E +LF + + I + +T + + L +++G+
Sbjct: 279 ERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGR 338
Query: 245 ALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNG 304
H + + + + +L+ MY + GS+ + +F M D+V WN M+SA+ NG
Sbjct: 339 QFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNG 398
Query: 305 CPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHN 364
E L LVY M + G + D T +S+ + L++ E GKQ HA +IR G ++ +++
Sbjct: 399 LDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNS 457
Query: 365 ALIDMYSACNGLNSARRIFDL--ITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGT 422
LIDMYS + ++++F+ ++ +W++MI + + + +F +M
Sbjct: 458 YLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNI 517
Query: 423 RVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARK 482
R + + V +ILP ++IG++ + LHG+ ++L+ Y+K G I+ A
Sbjct: 518 RPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAED 577
Query: 483 LFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNS 542
+F + K ++ + + +MI Y +HG + L+ M+ S +KPD +TF+ +L+AC S
Sbjct: 578 MFSQTK--ERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYS 635
Query: 543 GLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSD-ARVYG 601
GL+D+G +IF+EM ++Y QPS EH+ C+ D+LGR G+++EA + ++ + + A ++G
Sbjct: 636 GLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWG 695
Query: 602 PLLSACKMHSDPRLAEVAAQKLINMEP-KNAGNY-VLLSNIYAAAGKWDKVAKMRSFLRD 659
LL +CK+H + LAE +++L + KN Y VLLSN+YA KW V K+R +R+
Sbjct: 696 SLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMRE 755
Query: 660 RGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
+GLKK G S +E G V+ F DQ HP S +IY ++
Sbjct: 756 KGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVI 793
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 191/413 (46%), Gaps = 23/413 (5%)
Query: 192 WNNMISQAFESGKMEECFQLFSRMRKENIQPN--SITVINLLRSTVDLHLLKIGQALHSL 249
WN +I + E +SRM+K N + T + L++ + LK G+A+H
Sbjct: 73 WNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCH 132
Query: 250 IIVSNLCGELTVNTALLSMYVKLGSLKD------ARLMFEKMPRNDLVVWNIMVSAYAGN 303
+I V+ +L++MYV + D R +F+ M R ++V WN ++S Y
Sbjct: 133 LIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKT 192
Query: 304 GCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDY--QVS 361
G E+ M+R V+P + + +++ + + + +++ G +Y +
Sbjct: 193 GRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLF 252
Query: 362 VHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCG 421
V ++ I MY+ + S+RR+FD ++ + W+ MI + +D +E++ LF+E G
Sbjct: 253 VVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEA--IG 310
Query: 422 TRVDFIIVINILPTFAKIGALHYV---RYLHGYXXXXXXXXXXXXETSLLASYAKCGCIE 478
++ + L + + AL V R HG+ SL+ Y++CG +
Sbjct: 311 SKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVH 370
Query: 479 MARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTA 538
+ +F + +D+++WN+MISA+ ++G + L +M+ K D +T LL+A
Sbjct: 371 KSFGVFLSMR--ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSA 428
Query: 539 CVNSGLVDKGKEIFKEMVDLYGYQPSQEH--HACMVDLLGRAGQIDEASKIIE 589
N + KEI K+ Q Q ++ ++D+ ++G I + K+ E
Sbjct: 429 ASNL----RNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFE 477
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 138/298 (46%), Gaps = 17/298 (5%)
Query: 266 LSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG--VRP 323
LS + G+ + AR +F+ +P+ V+WN ++ + N P E+L M ++
Sbjct: 46 LSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNC 105
Query: 324 DMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNS----- 378
D +T + + + K+ + GK +H H+IR + VHN+L++MY +C LN+
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSC--LNAPDCFE 163
Query: 379 ---ARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPT 435
R++FD + K VV+W+ +I + + EA F M + + +N+ P
Sbjct: 164 YDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPA 223
Query: 436 FAKIGALHYVRYLHGYXXXXXXXXXXX--XETSLLASYAKCGCIEMARKLFDEGKSSHKD 493
+ ++ +G +S ++ YA+ G IE +R++FD ++
Sbjct: 224 VSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFD--SCVERN 281
Query: 494 IIAWNSMISAYSKHGEWFQCFELY-NQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKE 550
I WN+MI Y ++ + EL+ + + D+VT+L +A V+ G++
Sbjct: 282 IEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQ 339
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 198/665 (29%), Positives = 320/665 (48%), Gaps = 64/665 (9%)
Query: 28 FTTSSLLDLCTK---PQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFG-LPGLSQKVFY 83
FT +S+L C+K + H GL +N + + L+ Y K G + +VF
Sbjct: 139 FTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFE 198
Query: 84 FTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVL------RSCFS 137
P+ V Y+A++ L++ + + + +++ M EK + D S +L C S
Sbjct: 199 SLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDS 258
Query: 138 VS----HEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL-EGMSVTELAYW 192
+S +E GK +H ++LG + NSL+E+Y KN +N E + M + W
Sbjct: 259 LSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSW 318
Query: 193 NNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIV 252
N MI + + ++ + +RMR QPN +T I++L G S
Sbjct: 319 NIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVL-----------GACFRS---- 363
Query: 253 SNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLEL 312
G ++ R +F +P+ + WN M+S Y+ +E++
Sbjct: 364 --------------------GDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISN 403
Query: 313 VYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSA 372
M ++PD T +SS +L+ E GKQ+H VIR + + LI +YS
Sbjct: 404 FRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSE 463
Query: 373 CNGLNSARRIFD-LITDKTVVSWSAMIKA--HAVHDQCLEALSLFIEMK----LCGTRVD 425
C + + IFD I + + W++MI H + D +AL LF M LC
Sbjct: 464 CEKMEISECIFDDCINELDIACWNSMISGFRHNMLDT--KALILFRRMHQTAVLCPNETS 521
Query: 426 FIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFD 485
F V L + +++ +L + R HG ET+L Y KCG I+ AR+ FD
Sbjct: 522 FATV---LSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFD 578
Query: 486 EGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLV 545
K+ + WN MI Y +G + LY +M S KPD +TF+ +LTAC +SGLV
Sbjct: 579 --AVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLV 636
Query: 546 DKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLS 605
+ G EI M ++G +P +H+ C+VD LGRAG++++A K+ E P S + ++ LLS
Sbjct: 637 ETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLS 696
Query: 606 ACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKT 665
+C++H D LA A+KL+ ++P+++ YVLLSN Y++ +WD A ++ + + KT
Sbjct: 697 SCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKT 756
Query: 666 PGCSW 670
PG SW
Sbjct: 757 PGQSW 761
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/534 (24%), Positives = 239/534 (44%), Gaps = 50/534 (9%)
Query: 71 KFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSF 130
K G G + +VF D V ++ ++ L + G EK L +YK MV P + +
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 131 VLRSCFSVSHEQ-GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAH--EPLEGMSVT 187
VL +C V G H VK G+D V N+L+ +Y K GF+ + E +S
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 188 ELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLR---------STVDLH 238
+ +I K+ E Q+F M ++ +Q +S+ + N+L S +++
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 239 LLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVS 298
++G+ +H L + G+L +N +LL +Y K + A L+F +MP ++V WNIM+
Sbjct: 264 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIV 323
Query: 299 AYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDY 358
+ +S+E + M SG +P+ T I + + R+G
Sbjct: 324 GFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGA----------------CFRSGD-- 365
Query: 359 QVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMK 418
+ + RRIF I +V +W+AM+ ++ ++ EA+S F +M+
Sbjct: 366 -----------------VETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQ 408
Query: 419 LCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIE 478
+ D + IL + A++ L + +HG + L+A Y++C +E
Sbjct: 409 FQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKME 468
Query: 479 MARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVK-PDQVTFLGLLT 537
++ +FD+ + DI WNSMIS + + + L+ +M + V P++ +F +L+
Sbjct: 469 ISECIFDDCI-NELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLS 527
Query: 538 ACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETV 591
+C + G++ F +V GY + D+ + G+ID A + + V
Sbjct: 528 SCSRLCSLLHGRQ-FHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAV 580
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 146/303 (48%), Gaps = 12/303 (3%)
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
A L+ K+G L +A +F+ MP D+V WN M+S G +++L + MV G
Sbjct: 76 NAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFL 135
Query: 323 PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGL-NSARR 381
P FT +S+ +++ +G + H ++ G D + V NAL+ MY+ C + + R
Sbjct: 136 PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVR 195
Query: 382 IFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILP------- 434
+F+ ++ VS++A+I A ++ LEA+ +F M G +VD + + NIL
Sbjct: 196 VFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREG 255
Query: 435 --TFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHK 492
+ ++I + +H SLL YAK + A +F E
Sbjct: 256 CDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAE--MPEV 313
Query: 493 DIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIF 552
++++WN MI + + + E +M+ S +P++VT + +L AC SG V+ G+ IF
Sbjct: 314 NVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIF 373
Query: 553 KEM 555
+
Sbjct: 374 SSI 376
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/285 (19%), Positives = 113/285 (39%), Gaps = 42/285 (14%)
Query: 344 GKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLIT---------------- 387
GK +H ++R G + N L+D+Y C + AR++FD ++
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 388 ---------------DKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINI 432
++ VVSW+ MI +AL ++ M G + ++
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 433 LPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCI-EMARKLFDEGKSSH 491
L +K+ + HG +LL+ YAKCG I + ++F+ S
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFE--SLSQ 202
Query: 492 KDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEI 551
+ +++ ++I ++ + + +++ M V+ D V +L+ + +E
Sbjct: 203 PNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS-------ISAPREG 255
Query: 552 FKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSD 596
+ ++YG + ++ H C+ LG G + + ++E N D
Sbjct: 256 CDSLSEIYGNELGKQIH-CLALRLGFGGDLHLNNSLLEIYAKNKD 299
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 286 bits (731), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 161/543 (29%), Positives = 285/543 (52%), Gaps = 4/543 (0%)
Query: 160 LVRNSLVELYEKNGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKEN 219
L N +V +EK A + M ++ W MI+ S ++ F M K+
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 220 IQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLG-SLKDA 278
PN T+ ++L+S ++ +L G +H +++ + G L V+ A+++MY +++ A
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 279 RLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQL 338
L+F + + V W +++ + G L++ M+ + A+ + +
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASI 226
Query: 339 KHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMI 398
GKQ+HA VI+ G + V N+++D+Y C L+ A+ F + DK +++W+ +I
Sbjct: 227 DSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI 286
Query: 399 KAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXX 458
D EAL +F + G + +++ A I AL+ + LHG
Sbjct: 287 SELERSDSS-EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN 345
Query: 459 XXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYN 518
+L+ YAKCG I ++++F E +++++W SM+ Y HG + EL++
Sbjct: 346 KNVELANALIDMYAKCGNIPDSQRVFGE-IVDRRNLVSWTSMMIGYGSHGYGAEAVELFD 404
Query: 519 QMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRA 578
+M S ++PD++ F+ +L+AC ++GLV+KG + F M YG P ++ + C+VDLLGRA
Sbjct: 405 KMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRA 464
Query: 579 GQIDEASKIIETVPLNSDARVYGPLLSACKMHS-DPRLAEVAAQKLINMEPKNAGNYVLL 637
G+I EA +++E +P D +G +L ACK H + ++ +AA+K++ ++PK G YV+L
Sbjct: 465 GKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVML 524
Query: 638 SNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
S IYAA GKW A++R +R G KK G SW+ QV F V+D+ P + +YS+L
Sbjct: 525 SYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVL 584
Query: 698 KVM 700
++
Sbjct: 585 GLL 587
Score = 149 bits (377), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 220/488 (45%), Gaps = 50/488 (10%)
Query: 61 LSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKS 120
L++ L+ Y + GL ++ +F + D V ++A++ + + + + EMV++
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 121 MYPDEESCSFVLRSCFSVS-HEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHE 179
P+E + S VL+SC ++ G +VH +VKLGM+ V N+++ +Y
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 180 PL--EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDL 237
L + V W +I+ G +++ +M EN + + +R++ +
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASI 226
Query: 238 HLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMV 297
+ G+ +H+ +I L V ++L +Y + G L +A+ F +M DL+ WN ++
Sbjct: 227 DSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI 286
Query: 298 SAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSD 357
S + E+L + G P+ +T +++ + G+Q+H + R G +
Sbjct: 287 SELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN 345
Query: 358 YQVSVHNALIDMYSACNGLNSARRIFDLITD-KTVVSWSAMIKAHAVHDQCLEALSLFIE 416
V + NALIDMY+ C + ++R+F I D + +VSW++M+ + H EA+ LF +
Sbjct: 346 KNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDK 405
Query: 417 MKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGC 476
M G R D I+ + ++L++ G
Sbjct: 406 MVSSGIRPDRIVFM-----------------------------------AVLSACRHAGL 430
Query: 477 IEMARKLFDEGKSSH-----KDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVT 531
+E K F+ +S + +DI +N ++ + G+ + +EL +M KPD+ T
Sbjct: 431 VEKGLKYFNVMESEYGINPDRDI--YNCVVDLLGRAGKIGEAYELVERMPF---KPDEST 485
Query: 532 FLGLLTAC 539
+ +L AC
Sbjct: 486 WGAILGAC 493
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 121/261 (46%), Gaps = 6/261 (2%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQF 103
+QIHA G N + + ++D Y + G ++ F+ E+ D + ++ ++ L +
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELER- 291
Query: 104 GEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQIVKLGMDAFDLVR 162
+ + L +++ + P+ + + ++ +C +++ G+ +H +I + G + +
Sbjct: 292 SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELA 351
Query: 163 NSLVELYEKNGFLNAHEPLEGMSVTE--LAYWNNMISQAFESGKMEECFQLFSRMRKENI 220
N+L+++Y K G + + + G V L W +M+ G E +LF +M I
Sbjct: 352 NALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGI 411
Query: 221 QPNSITVINLLRSTVDLHLLKIGQALHSLIIVS-NLCGELTVNTALLSMYVKLGSLKDAR 279
+P+ I + +L + L++ G +++ + + + ++ + + G + +A
Sbjct: 412 RPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAY 471
Query: 280 LMFEKMP-RNDLVVWNIMVSA 299
+ E+MP + D W ++ A
Sbjct: 472 ELVERMPFKPDESTWGAILGA 492
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 32/197 (16%)
Query: 23 FQTRFFTTSSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQ 79
F +T +SL+ C L QQ+H R F G ++N L++ L+D Y K G SQ
Sbjct: 309 FVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQ 368
Query: 80 KVF-YFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSV 138
+VF + + V +++++ G + + L+ +MV + PD VL +C
Sbjct: 369 RVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSAC--- 425
Query: 139 SHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTELAYWNNMISQ 198
HA +V+ G+ F+++ E +N + +N ++
Sbjct: 426 -------RHAGLVEKGLKYFNVM--------ESEYGINPDRDI----------YNCVVDL 460
Query: 199 AFESGKMEECFQLFSRM 215
+GK+ E ++L RM
Sbjct: 461 LGRAGKIGEAYELVERM 477
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 283 bits (725), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 194/657 (29%), Positives = 330/657 (50%), Gaps = 23/657 (3%)
Query: 32 SLLDLCTKPQHL---QQIHARFFLHGLHQNSS-LSSKLMDCYTKFGLPGLSQKVFYFTEN 87
SLL+ C + ++L Q IH L +SS + L Y L++ VF +
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPH 63
Query: 88 P--DSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSV-SHEQGK 144
P + + + ++R + EK L LY +M+ + P + + FVL++C + + + GK
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 145 MVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESG 203
++H+ + V +LV+ Y K G L A + + M ++ WN MIS
Sbjct: 124 LIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHC 183
Query: 204 KMEECFQLFSRMRK-ENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN 262
+ + LF MR+ + + PN T++ + + L+ G+A+H +L V
Sbjct: 184 CLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
T +L +Y K + AR +F+ + + V W+ M+ Y N KE+ E+ + M+ V
Sbjct: 244 TGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML---VN 300
Query: 323 PDMFTAIP-AISSI----TQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLN 377
++ P AI I + G+ +H + ++ G ++V N +I Y+ L
Sbjct: 301 DNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLC 360
Query: 378 SARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFA 437
A R F I K V+S++++I V+ + E+ LF EM+ G R D ++ +L +
Sbjct: 361 DAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACS 420
Query: 438 KIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHK-DIIA 496
+ AL + HGY +L+ Y KCG +++A+++FD + HK DI++
Sbjct: 421 HLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFD---TMHKRDIVS 477
Query: 497 WNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMV 556
WN+M+ + HG + L+N M+ + V PD+VT L +L+AC +SGLVD+GK++F M
Sbjct: 478 WNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMS 537
Query: 557 -DLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRL 615
+ P +H+ CM DLL RAG +DEA + +P D RV G LLSAC + + L
Sbjct: 538 RGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAEL 597
Query: 616 AEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLE 672
++K+ ++ + + VLLSN Y+AA +W+ A++R + RGL KTPG SW++
Sbjct: 598 GNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVD 653
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 195/394 (49%), Gaps = 14/394 (3%)
Query: 228 INLLRSTVDLHLLKIGQALHSLIIVSNLC-GELTVNTALLSMYVKLGSLKDARLMFEKMP 286
++LL + + L +GQ +H ++ +L TV L +Y ++ AR +F+++P
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIP 62
Query: 287 --RNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWG 344
R + + W++M+ AYA N +++L+L Y M+ SGVRP +T + + L+ + G
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG 122
Query: 345 KQMHAHVIRNGSDYQVSVH--NALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHA 402
K +H+HV N SD+ ++ AL+D Y+ C L A ++FD + + +V+W+AMI +
Sbjct: 123 KLIHSHV--NCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 403 VHDQCLEALSLFIEM-KLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXX 461
+H + + LF++M ++ G + ++ + P + GAL + +HGY
Sbjct: 181 LHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL 240
Query: 462 XXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMK 521
+T +L YAK CI AR++FD K+ + W++MI Y ++ + E++ QM
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFD--LDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML 298
Query: 522 LS-NVKPDQVTFLGL-LTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAG 579
++ NV +GL L C G + G+ + V G+ ++ + G
Sbjct: 299 VNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKA-GFILDLTVQNTIISFYAKYG 357
Query: 580 QIDEASKIIETVPLNSDARVYGPLLSACKMHSDP 613
+ +A + + L D Y L++ C ++ P
Sbjct: 358 SLCDAFRQFSEIGLK-DVISYNSLITGCVVNCRP 390
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 173/550 (31%), Positives = 291/550 (52%), Gaps = 45/550 (8%)
Query: 163 NSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQ 221
N LV Y KNG ++ A + + M + W ++ +GK++ LF +M ++N
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV 142
Query: 222 PNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLM 281
++ +I L+ +I A ++ + + T+++ K G + +AR +
Sbjct: 143 SWTVMLIGFLQDG------RIDDACKLYEMIPD--KDNIARTSMIHGLCKEGRVDEAREI 194
Query: 282 FEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHT 341
F++M ++ W MV+ Y N ++ ++ F +P + ++
Sbjct: 195 FDEMSERSVITWTTMVTGYGQNNRVDDARKI-------------FDVMPEKTEVS----- 236
Query: 342 EWGKQMHAHVIRNG--SDYQVSVHNALIDMYSACNGLNS----------ARRIFDLITDK 389
W + +V +NG D + + ACN + S ARR+FD + ++
Sbjct: 237 -WTSMLMGYV-QNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKER 294
Query: 390 TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLH 449
SW +IK H + LEAL LFI M+ G R F +I+IL A + +LH+ + +H
Sbjct: 295 NDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVH 354
Query: 450 GYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGE 509
+ L+ Y KCG + ++ +FD S KDII WNS+IS Y+ HG
Sbjct: 355 AQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS--KDIIMWNSIISGYASHGL 412
Query: 510 WFQCFELYNQMKLS-NVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHH 568
+ +++ +M LS + KP++VTF+ L+AC +G+V++G +I++ M ++G +P H+
Sbjct: 413 GEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHY 472
Query: 569 ACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEP 628
ACMVD+LGRAG+ +EA ++I+++ + DA V+G LL AC+ HS +AE A+KLI +EP
Sbjct: 473 ACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEP 532
Query: 629 KNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEF-RVADQSH 687
+N+G Y+LLSN+YA+ G+W VA++R ++ R ++K+PGCSW E +VH F R SH
Sbjct: 533 ENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSH 592
Query: 688 PRSVDIYSIL 697
P I IL
Sbjct: 593 PEQESILKIL 602
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 119/535 (22%), Positives = 232/535 (43%), Gaps = 65/535 (12%)
Query: 65 LMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPD 124
L+ Y K G ++KVF + V ++A+++ G+ + L+ +M EK +
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----N 140
Query: 125 EESCSFVLRSCFSVSHEQGKMVHA-QIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLE 182
+ S + +L + G++ A ++ ++ D ++ R S++ K G ++ A E +
Sbjct: 141 KVSWTVMLIGFL----QDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFD 196
Query: 183 GMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKI 242
MS + W M++ ++ ++++ ++F M + ++ ++L V ++
Sbjct: 197 EMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMGYVQNGRIED 252
Query: 243 GQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAG 302
+ L ++ V + A++S + G + AR +F+ M + W ++ +
Sbjct: 253 AEELFEVMPVK----PVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHER 308
Query: 303 NGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSV 362
NG E+L+L M + GVRP T I +S L GKQ+HA ++R D V V
Sbjct: 309 NGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYV 368
Query: 363 HNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGT 422
+ L+ MY C L ++ IFD K ++ W+++I +A H EAL +F EM L G+
Sbjct: 369 ASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGS 428
Query: 423 RVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARK 482
K + +V L SYA G +E K
Sbjct: 429 --------------TKPNEVTFVATLSA------------------CSYA--GMVEEGLK 454
Query: 483 LFDEGKS--SHKDIIA-WNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTAC 539
+++ +S K I A + M+ + G + + E+ + M V+PD + LL AC
Sbjct: 455 IYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSM---TVEPDAAVWGSLLGAC 511
Query: 540 VNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLL----GRAGQIDEASKIIET 590
+D + K+++++ +P ++ + GR + E K+++T
Sbjct: 512 RTHSQLDVAEFCAKKLIEI---EPENSGTYILLSNMYASQGRWADVAELRKLMKT 563
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 436 FAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDII 495
++IG +H R L S++A Y ARKLFDE ++II
Sbjct: 27 LSRIGKIHEARKLFDSCDSKSISSW----NSMVAGYFANLMPRDARKLFDE--MPDRNII 80
Query: 496 AWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEM 555
+WN ++S Y K+GE + ++++ M NV V++ L+ V++G VD + +F +M
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPERNV----VSWTALVKGYVHNGKVDVAESLFWKM 136
Query: 556 VDLYGYQPSQEHHACMVDLLG--RAGQIDEASKIIETVP 592
P + + V L+G + G+ID+A K+ E +P
Sbjct: 137 -------PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIP 168
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 151/455 (33%), Positives = 257/455 (56%), Gaps = 2/455 (0%)
Query: 243 GQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAG 302
+A H II +L G++T+ L++ Y K G ++ AR +F+ M LV WN M+ Y
Sbjct: 80 AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 139
Query: 303 NGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSV 362
N E+L++ M G + FT +S+ K++H ++ D + V
Sbjct: 140 NRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYV 199
Query: 363 HNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGT 422
AL+D+Y+ C + A ++F+ + DK+ V+WS+M+ + + EAL L+ +
Sbjct: 200 GTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSL 259
Query: 423 RVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARK 482
+ + +++ + + AL + +H +S + YAKCG + +
Sbjct: 260 EQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYI 319
Query: 483 LFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNS 542
+F E + K++ WN++IS ++KH + L+ +M+ + P++VTF LL+ C ++
Sbjct: 320 IFSEVQ--EKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHT 377
Query: 543 GLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGP 602
GLV++G+ FK M YG P+ H++CMVD+LGRAG + EA ++I+++P + A ++G
Sbjct: 378 GLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGS 437
Query: 603 LLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGL 662
LL++C+++ + LAEVAA+KL +EP+NAGN+VLLSNIYAA +W+++AK R LRD +
Sbjct: 438 LLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDV 497
Query: 663 KKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
KK G SW++ +VH F V + HPR +I S L
Sbjct: 498 KKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTL 532
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 181/380 (47%), Gaps = 9/380 (2%)
Query: 33 LLDLCTKPQHLQQ---IHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPD 89
+L LC + + + H + L + +L + L++ Y+K G L+++VF
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 90 SVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSC-FSVSHEQGKMVHA 148
V ++ ++ ++ + L ++ EM + E + S VL +C + + K +H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 149 QIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEE 207
VK +D V +L++LY K G + +A + E M W++M++ ++ EE
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 208 CFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLS 267
L+ R ++ +++ N T+ +++ + +L L G+ +H++I S + V ++ +
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 268 MYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFT 327
MY K GSL+++ ++F ++ +L +WN ++S +A + PKE + L M + G+ P+ T
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 328 AIPAISSITQLKHTEWGKQMHAHVIRN--GSDYQVSVHNALIDMYSACNGLNSARRIFDL 385
+S E G++ ++R G V ++ ++D+ L+ A +
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFF-KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKS 425
Query: 386 IT-DKTVVSWSAMIKAHAVH 404
I D T W +++ + V+
Sbjct: 426 IPFDPTASIWGSLLASCRVY 445
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 282 bits (722), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 156/533 (29%), Positives = 278/533 (52%), Gaps = 11/533 (2%)
Query: 174 FLNAHEPLEGMSVTELAYWNNMISQAFESG---KMEECFQLFSRMRKENIQPNSITVINL 230
F A L + + W+++I F G F + MR+ + P+ T L
Sbjct: 52 FRYARRLLCQLQTLSIQLWDSLIGH-FSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPL 110
Query: 231 LRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDL 290
L++ L Q H+ I+ L + V +L+S Y G A +F+ D+
Sbjct: 111 LKAVFKLRDSNPFQ-FHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDV 169
Query: 291 VVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAH 350
V W M+ + NG E++ M ++GV + T + + + +++ +G+ +H
Sbjct: 170 VTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGL 229
Query: 351 VIRNGS-DYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLE 409
+ G V + ++L+DMY C+ + A+++FD + + VV+W+A+I + V +C +
Sbjct: 230 YLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGY-VQSRCFD 288
Query: 410 -ALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLL 468
+ +F EM + + ++L A +GALH R +H Y T+L+
Sbjct: 289 KGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLI 348
Query: 469 ASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPD 528
Y KCGC+E A +F+ + K++ W +MI+ ++ HG F+L+ M S+V P+
Sbjct: 349 DLYVKCGCLEEAILVFE--RLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPN 406
Query: 529 QVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKII 588
+VTF+ +L+AC + GLV++G+ +F M + +P +H+ACMVDL GR G ++EA +I
Sbjct: 407 EVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALI 466
Query: 589 ETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWD 648
E +P+ V+G L +C +H D L + AA ++I ++P ++G Y LL+N+Y+ + WD
Sbjct: 467 ERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWD 526
Query: 649 KVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHP-RSVDIYSILKVM 700
+VA++R ++D+ + K+PG SW+E G++ EF D P S D+Y L +
Sbjct: 527 EVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTV 579
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 187/393 (47%), Gaps = 7/393 (1%)
Query: 32 SLLDLCTKPQHLQQIHARFFLHGL---HQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENP 88
+LLDL HL+QIH + ++ LS L C T ++++ +
Sbjct: 6 TLLDLPLHFLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTL 65
Query: 89 DSVIYSAILRNLSQFGEHEKTL-FL-YKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMV 146
++ +++ + S + L FL Y+ M + P + +L++ F +
Sbjct: 66 SIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQF 125
Query: 147 HAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKM 205
HA IVK G+D+ VRNSL+ Y +G + A +G ++ W MI +G
Sbjct: 126 HAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSA 185
Query: 206 EECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLII-VSNLCGELTVNTA 264
E F M+K + N +TV+++L++ + ++ G+++H L + + ++ + ++
Sbjct: 186 SEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSS 245
Query: 265 LLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPD 324
L+ MY K DA+ +F++MP ++V W +++ Y + C + + + M++S V P+
Sbjct: 246 LVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPN 305
Query: 325 MFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFD 384
T +S+ + G+++H ++I+N + + LID+Y C L A +F+
Sbjct: 306 EKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFE 365
Query: 385 LITDKTVVSWSAMIKAHAVHDQCLEALSLFIEM 417
+ +K V +W+AMI A H +A LF M
Sbjct: 366 RLHEKNVYTWTAMINGFAAHGYARDAFDLFYTM 398
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 282 bits (721), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 164/500 (32%), Positives = 274/500 (54%), Gaps = 19/500 (3%)
Query: 207 ECFQLFSRMRKENIQPNSITVI---NLLRSTVDLHLLKIGQALHSLIIVS---NLCGELT 260
E F S++ N Q N I +I N LR + + I + + V+ N C E
Sbjct: 16 ETFTKHSKIDTVNTQ-NPILLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESP 74
Query: 261 VNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG 320
+ S+ AR +FE M D+V++N M Y+ P E L ++ G
Sbjct: 75 TES----------SMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDG 124
Query: 321 VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSAR 380
+ PD +T + + K E G+Q+H ++ G D V V LI+MY+ C ++SAR
Sbjct: 125 ILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSAR 184
Query: 381 RIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIG 440
+FD I + VV ++AMI +A ++ EALSLF EM+ + + I ++++L + A +G
Sbjct: 185 CVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLG 244
Query: 441 ALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSM 500
+L +++H Y T+L+ +AKCG ++ A +F+ K +KD AW++M
Sbjct: 245 SLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFE--KMRYKDTQAWSAM 302
Query: 501 ISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYG 560
I AY+ HG+ + ++ +M+ NV+PD++TFLGLL AC ++G V++G++ F +MV +G
Sbjct: 303 IVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFG 362
Query: 561 YQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAA 620
PS +H+ MVDLL RAG +++A + I+ +P++ ++ LL+AC H++ LAE +
Sbjct: 363 IVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVS 422
Query: 621 QKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEF 680
+++ ++ + G+YV+LSN+YA KW+ V +R ++DR K PGCS +E N VHEF
Sbjct: 423 ERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEF 482
Query: 681 RVADQSHPRSVDIYSILKVM 700
D + ++ L M
Sbjct: 483 FSGDGVKSATTKLHRALDEM 502
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 187/381 (49%), Gaps = 8/381 (2%)
Query: 33 LLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPG---LSQKVFYFTENPD 89
L+ C + L QI A + + ++ S +KL++ T+ ++ +F PD
Sbjct: 35 LISKCNSLRELMQIQA-YAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPD 93
Query: 90 SVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSC-FSVSHEQGKMVHA 148
VI++++ R S+F + L+ E++E + PD + +L++C + + E+G+ +H
Sbjct: 94 IVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHC 153
Query: 149 QIVKLGMDAFDLVRNSLVELY-EKNGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEE 207
+KLG+D V +L+ +Y E +A + + + +N MI+ + E
Sbjct: 154 LSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNE 213
Query: 208 CFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLS 267
LF M+ + ++PN IT++++L S L L +G+ +H + C + VNTAL+
Sbjct: 214 ALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALID 273
Query: 268 MYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFT 327
M+ K GSL DA +FEKM D W+ M+ AYA +G ++S+ + M V+PD T
Sbjct: 274 MFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEIT 333
Query: 328 AIPAISSITQLKHTEWGKQMHAHVI-RNGSDYQVSVHNALIDMYSACNGLNSARRIFD-L 385
+ +++ + E G++ + ++ + G + + +++D+ S L A D L
Sbjct: 334 FLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKL 393
Query: 386 ITDKTVVSWSAMIKAHAVHDQ 406
T + W ++ A + H+
Sbjct: 394 PISPTPMLWRILLAACSSHNN 414
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 281 bits (720), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 183/587 (31%), Positives = 297/587 (50%), Gaps = 45/587 (7%)
Query: 123 PDEESCSFVLRSCFSVSHE-QGKMVHAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEP 180
P++ + +L+SC + QG+++HAQ+VK G +LV +Y K +A +
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 181 LEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLL 240
L+ M +A N +S E+G + F++F R NS+TV ++L D+
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDI--- 145
Query: 241 KIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAY 300
+ G LH L + S E+ V T+L+SMY + G A MFEK+P +V +N +S
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 301 AGNGCPKESLELVYCMVR--SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDY 358
NG + V+ ++R S P+ T + AI++ L + ++G+Q+H V++ +
Sbjct: 206 MENGV-MNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQF 264
Query: 359 QVSVHNALIDMYSACNGLNSARRIFDLITD-KTVVSWSAMIKAHAVHDQCLEALSLFIEM 417
+ V ALIDMYS C SA +F + D + ++SW+++I ++ Q A+ LF ++
Sbjct: 265 ETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKL 324
Query: 418 KLCGTRVDFIIVINILPTFAKIG-----------------------------------AL 442
G + D +++ F+++G L
Sbjct: 325 DSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTL 384
Query: 443 HYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMIS 502
+ +HG+ TSL+ Y KCG AR++FD + KD + WN MIS
Sbjct: 385 KNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMIS 444
Query: 503 AYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQ 562
Y KHGE E++ ++ V+P TF +L+AC + G V+KG +IF+ M + YGY+
Sbjct: 445 GYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYK 504
Query: 563 PSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQK 622
PS EH CM+DLLGR+G++ EA ++I+ + S + LL +C+ H DP L E AA K
Sbjct: 505 PSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYS-SLLGSCRQHLDPVLGEEAAMK 563
Query: 623 LINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCS 669
L +EP+N +V+LS+IYAA +W+ V +R + + L K PG S
Sbjct: 564 LAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 175/399 (43%), Gaps = 44/399 (11%)
Query: 29 TTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENP 88
T +S+L C + Q+H G + + L+ Y++ G L+ ++F +
Sbjct: 134 TVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHK 193
Query: 89 DSVIYSAILRNLSQFGEHEKTLFLYKEMVE-KSMYPDEESCSFVLRSCFSVSHEQ-GKMV 146
V Y+A + L + G ++ M + S P++ + + +C S+ + Q G+ +
Sbjct: 194 SVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQL 253
Query: 147 HAQIVKLGMDAFDLVRNSLVELYEK-----------------NGFLNAHEPLEGM----- 184
H ++K +V +L+++Y K ++ + + GM
Sbjct: 254 HGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQ 313
Query: 185 --SVTEL-------------AYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVIN 229
+ EL A WN++IS + GK+ E F+ F RM + P+ + +
Sbjct: 314 HETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTS 373
Query: 230 LLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKM-PR- 287
LL + D+ LK G+ +H +I + ++ V T+L+ MY+K G AR +F++ P+
Sbjct: 374 LLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKP 433
Query: 288 NDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQM 347
D V WN+M+S Y +G + ++E+ + V P + T +S+ + + E G Q+
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQI 493
Query: 348 HAHVIRNGSDYQVSVH--NALIDMYSACNGLNSARRIFD 384
+++ Y+ S +ID+ L A+ + D
Sbjct: 494 F-RLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVID 531
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 281 bits (720), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 175/578 (30%), Positives = 313/578 (54%), Gaps = 17/578 (2%)
Query: 129 SFVLRSCFSVSHEQG-KMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSV 186
S +LR C G K + A ++K G A ++ + LV+ K G ++ A + +GMS
Sbjct: 69 SQLLRQCIDERSISGIKTIQAHMLKSGFPA-EISGSKLVDASLKCGDIDYARQVFDGMSE 127
Query: 187 TELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQAL 246
+ WN++I+ + + +E +++ M N+ P+ T+ ++ ++ DL L K Q
Sbjct: 128 RHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRS 187
Query: 247 HSLIIVSNL-CGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGC 305
H L ++ L + V +AL+ MYVK G ++A+L+ +++ D+V+ ++ Y+ G
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE 247
Query: 306 PKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNA 365
E+++ M+ V+P+ +T + S LK GK +H ++++G + ++ +
Sbjct: 248 DTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTS 307
Query: 366 LIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVD 425
L+ MY C+ ++ + R+F I VSW+++I + + AL F +M + +
Sbjct: 308 LLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPN 367
Query: 426 FIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFD 485
+ + L + + R +HG + L+ Y KCGC +MAR +FD
Sbjct: 368 SFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFD 427
Query: 486 EGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLV 545
S D+I+ N+MI +Y+++G + +L+ +M ++P+ VT L +L AC NS LV
Sbjct: 428 --TLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLV 485
Query: 546 DKGKEIF----KEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYG 601
++G E+F K+ + L + +H+ACMVDLLGRAG+++EA +++ T +N D ++
Sbjct: 486 EEGCELFDSFRKDKIML-----TNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWR 539
Query: 602 PLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRG 661
LLSACK+H +AE +K++ +EP + G +L+SN+YA+ GKW++V +M+S ++D
Sbjct: 540 TLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMK 599
Query: 662 LKKTPGCSWLESNGQVHEFRVADQ-SHPRSVDIYSILK 698
LKK P SW+E N + H F D SHP S I L+
Sbjct: 600 LKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLE 637
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 200/409 (48%), Gaps = 7/409 (1%)
Query: 31 SSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTEN 87
S LL C + + + I A G S SKL+D K G +++VF
Sbjct: 69 SQLLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMSE 127
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHE-QGKMV 146
V +++++ L + ++ + +Y+ M+ ++ PDE + S V ++ +S E + +
Sbjct: 128 RHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRS 187
Query: 147 HAQIVKLGMDAFDL-VRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFESGK 204
H V LG++ ++ V ++LV++Y K G A L+ + ++ +I + G+
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE 247
Query: 205 MEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTA 264
E + F M E +QPN T ++L S +L + G+ +H L++ S L T+
Sbjct: 248 DTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTS 307
Query: 265 LLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPD 324
LL+MY++ + D+ +F+ + + V W ++S NG + +L M+R ++P+
Sbjct: 308 LLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPN 367
Query: 325 MFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFD 384
FT A+ + L E G+Q+H V + G D + LID+Y C + AR +FD
Sbjct: 368 SFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFD 427
Query: 385 LITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINIL 433
+++ V+S + MI ++A + EAL LF M G + + + V+++L
Sbjct: 428 TLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVL 476
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 178/367 (48%), Gaps = 3/367 (0%)
Query: 41 QHLQQIHARFFLHGLH-QNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRN 99
+ Q+ H + GL N + S L+D Y KFG ++ V E D V+ +A++
Sbjct: 182 KEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVG 241
Query: 100 LSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAF 158
SQ GE + + ++ M+ + + P+E + + VL SC ++ GK++H +VK G ++
Sbjct: 242 YSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESA 301
Query: 159 DLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRK 217
+ SL+ +Y + + ++ + + W ++IS ++G+ E F +M +
Sbjct: 302 LASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMR 361
Query: 218 ENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKD 277
++I+PNS T+ + LR +L + + G+ +H ++ + + L+ +Y K G
Sbjct: 362 DSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDM 421
Query: 278 ARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQ 337
ARL+F+ + D++ N M+ +YA NG +E+L+L M+ G++P+ T + + +
Sbjct: 422 ARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNN 481
Query: 338 LKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAM 397
+ E G ++ ++ + ++D+ L A + + + +V W +
Sbjct: 482 SRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTL 541
Query: 398 IKAHAVH 404
+ A VH
Sbjct: 542 LSACKVH 548
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 137/289 (47%), Gaps = 11/289 (3%)
Query: 19 IVAPFQTRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSS------KLMDCYTKF 72
+V Q +T +S+L C +L+ I +HGL S S L+ Y +
Sbjct: 259 LVEKVQPNEYTYASVLISCG---NLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRC 315
Query: 73 GLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVL 132
L S +VF E P+ V +++++ L Q G E L +++M+ S+ P+ + S L
Sbjct: 316 SLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSAL 375
Query: 133 RSCFSVS-HEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELA 190
R C +++ E+G+ +H + K G D + L++LY K G + A + +S ++
Sbjct: 376 RGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVI 435
Query: 191 YWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLI 250
N MI ++G E LF RM +QPN +TV+++L + + L++ G L
Sbjct: 436 SLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSF 495
Query: 251 IVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSA 299
+ ++ + + G L++A ++ ++ DLV+W ++SA
Sbjct: 496 RKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSA 544
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 177/556 (31%), Positives = 304/556 (54%), Gaps = 26/556 (4%)
Query: 131 VLRSCFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTELA 190
+L +++H Q VHA+++ G + ++ +SL Y ++ L+ S +
Sbjct: 13 ILSQAKTLNHTQ--QVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLD----FATSSFNRIP 66
Query: 191 YWN------NMISQAFESGKM---EECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLK 241
W N I + K + L++RMR+ +S ++ +++ V L LL+
Sbjct: 67 CWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLE 126
Query: 242 IGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYA 301
G +H L + + L + V +L+ MY +LG+++ A+ +F+++P + V+W +++ Y
Sbjct: 127 NGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYL 186
Query: 302 GNGCPKESLELVYCMVR-SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIR----NGS 356
E L +C++R +G+ D T I + + + + GK +H IR + S
Sbjct: 187 KYSKDPEVFRL-FCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQS 245
Query: 357 DYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIE 416
DY + ++IDMY C L++AR++F+ D+ VV W+ +I A ++ +EA LF +
Sbjct: 246 DY---LQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQ 302
Query: 417 MKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGC 476
M + + IL + + +G+L + + +HGY TS + YA+CG
Sbjct: 303 MLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGN 362
Query: 477 IEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLL 536
I+MAR +FD +++I+W+SMI+A+ +G + + + +++MK NV P+ VTF+ LL
Sbjct: 363 IQMARTVFD--MMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLL 420
Query: 537 TACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSD 596
+AC +SG V +G + F+ M YG P +EH+ACMVDLLGRAG+I EA I+ +P+
Sbjct: 421 SACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPM 480
Query: 597 ARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSF 656
A +G LLSAC++H + LA A+KL++MEP+ + YVLLSNIYA AG W+ V +R
Sbjct: 481 ASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRK 540
Query: 657 LRDRGLKKTPGCSWLE 672
+ +G +K G S E
Sbjct: 541 MGIKGYRKHVGQSATE 556
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 188/387 (48%), Gaps = 11/387 (2%)
Query: 41 QHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFY----FTENPDSVIYSAI 96
H QQ+HA+ +HG L S L + Y + + F + N S ++ I
Sbjct: 21 NHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHS--WNTI 78
Query: 97 LRNLSQFGE--HEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVS-HEQGKMVHAQIVKL 153
L S+ + L LY M D + F +++C + E G ++H +K
Sbjct: 79 LSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKN 138
Query: 154 GMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLF 212
G+D D V SLVE+Y + G + +A + + + V W ++ + K E F+LF
Sbjct: 139 GLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLF 198
Query: 213 SRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELT-VNTALLSMYVK 271
MR + +++T+I L+++ ++ K+G+ +H + I + + + +++ MYVK
Sbjct: 199 CLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVK 258
Query: 272 LGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPA 331
L +AR +FE ++V+W ++S +A E+ +L M+R + P+ T
Sbjct: 259 CRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAI 318
Query: 332 ISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTV 391
+ S + L GK +H ++IRNG + + IDMY+ C + AR +FD++ ++ V
Sbjct: 319 LVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNV 378
Query: 392 VSWSAMIKAHAVHDQCLEALSLFIEMK 418
+SWS+MI A ++ EAL F +MK
Sbjct: 379 ISWSSMINAFGINGLFEEALDCFHKMK 405
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 182/366 (49%), Gaps = 5/366 (1%)
Query: 46 IHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGE 105
IH +GL ++ ++ L++ Y + G +QKVF +SV++ +++ ++ +
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSK 190
Query: 106 HEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSV-SHEQGKMVHA-QIVKLGMDAFDLVRN 163
+ L+ M + + D + ++++C +V + + GK VH I + +D D ++
Sbjct: 191 DPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQA 250
Query: 164 SLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQP 222
S++++Y K L NA + E + W +IS + + E F LF +M +E+I P
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILP 310
Query: 223 NSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMF 282
N T+ +L S L L+ G+++H +I + + + T+ + MY + G+++ AR +F
Sbjct: 311 NQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVF 370
Query: 283 EKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTE 342
+ MP +++ W+ M++A+ NG +E+L+ + M V P+ T + +S+ + + +
Sbjct: 371 DMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVK 430
Query: 343 WGKQMHAHVIRNGSDYQVSVHNA-LIDMYSACNGLNSARRIFDLITDKTVVS-WSAMIKA 400
G + + R+ H A ++D+ + A+ D + K + S W A++ A
Sbjct: 431 EGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSA 490
Query: 401 HAVHDQ 406
+H +
Sbjct: 491 CRIHKE 496
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 183/638 (28%), Positives = 314/638 (49%), Gaps = 25/638 (3%)
Query: 42 HLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLS 101
++Q+ GL + + + L++ Y K G +Q +F D+V+++A++ S
Sbjct: 68 QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS 127
Query: 102 QFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDL 160
+ G L+ M+++ P + +L C QG+ VH K G++
Sbjct: 128 RNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQ 187
Query: 161 VRNSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKEN 219
V+N+L+ Y K L + E L M WN MI +SG EE +F M ++N
Sbjct: 188 VKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKN 247
Query: 220 IQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDAR 279
++ + +T+INLL + V + LH L++ + +++V T+L+ Y + G L A
Sbjct: 248 VEISPVTIINLLSAHVS------HEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAE 301
Query: 280 LMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVY-------CMVRSGVRPDMFTAIPAI 332
++ ++ +V +VS YA G + +VY CM + D + +
Sbjct: 302 RLYASAKQDSIVGLTSIVSCYAEKG--DMDIAVVYFSKTRQLCM-----KIDAVALVGIL 354
Query: 333 SSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVV 392
+ H + G +H + I++G + V N LI MYS + + + +F+ + + ++
Sbjct: 355 HGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLI 414
Query: 393 SWSAMIKAHAVHDQCLEALSLFIEMKLCGTRV-DFIIVINILPTFAKIGALHYVRYLHGY 451
SW+++I + A +F +M L G + D I + ++L +++ L+ + LHGY
Sbjct: 415 SWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGY 474
Query: 452 XXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWF 511
T+L+ YAKCG A +F K+ WNSMIS YS G
Sbjct: 475 TLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTA--TWNSMISGYSLSGLQH 532
Query: 512 QCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACM 571
+ Y +M+ +KPD++TFLG+L+AC + G VD+GK F+ M+ +G P+ +H+A M
Sbjct: 533 RALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALM 592
Query: 572 VDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNA 631
V LLGRA EA +I + + D+ V+G LLSAC +H + + E A+K+ ++ KN
Sbjct: 593 VGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNG 652
Query: 632 GNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCS 669
G YVL+SN+YA WD V ++R+ ++D G G S
Sbjct: 653 GLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVS 690
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 228/491 (46%), Gaps = 26/491 (5%)
Query: 112 LYKEMVEKSMYPDEESCSFVLR---SCFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVEL 168
++++++ S+ P+ + S L+ + F+ Q + V + K G+D F V+ SL+ L
Sbjct: 35 IFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNL 94
Query: 169 YEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITV 227
Y K G + + + L + M + WN +I +G + ++LF M ++ P++ T+
Sbjct: 95 YLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTL 154
Query: 228 INLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPR 287
+NLL + G+++H + S L + V AL+S Y K L A ++F +M
Sbjct: 155 VNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKD 214
Query: 288 NDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQM 347
V WN M+ AY+ +G +E++ + M V T I +S+ + H + +
Sbjct: 215 KSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA--HVSH----EPL 268
Query: 348 HAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQC 407
H V++ G +SV +L+ YS C L SA R++ ++V ++++ +A
Sbjct: 269 HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDM 328
Query: 408 LEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSL 467
A+ F + + ++D + ++ IL K + LHGY L
Sbjct: 329 DIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGL 388
Query: 468 LASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLS-NVK 526
+ Y+K +E LF++ + + +I+WNS+IS + G FE+++QM L+ +
Sbjct: 389 ITMYSKFDDVETVLFLFEQLQET--PLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLL 446
Query: 527 PDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQP----SQEHHAC--MVDLLGRAGQ 580
PD +T LL C ++ GKE L+GY E+ C ++D+ + G
Sbjct: 447 PDAITIASLLAGCSQLCCLNLGKE-------LHGYTLRNNFENENFVCTALIDMYAKCGN 499
Query: 581 IDEASKIIETV 591
+A + +++
Sbjct: 500 EVQAESVFKSI 510
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 180/376 (47%), Gaps = 17/376 (4%)
Query: 188 ELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITV-INLLRSTVDLHLLKIG-QA 245
+L+Y+++++ +F + + ++ PN T+ I L +T + K+ +
Sbjct: 12 DLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQ 71
Query: 246 LHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGC 305
+ + + S L + V T+LL++Y+K G + A+++F++MP D VVWN ++ Y+ NG
Sbjct: 72 VQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGY 131
Query: 306 PKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNA 365
++ +L M++ G P T + + Q G+ +H ++G + V NA
Sbjct: 132 ECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNA 191
Query: 366 LIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVD 425
LI YS C L SA +F + DK+ VSW+ MI A++ EA+++F M +
Sbjct: 192 LISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEIS 251
Query: 426 FIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFD 485
+ +IN+L LH + G TSL+ +Y++CGC+ A +L+
Sbjct: 252 PVTIINLLSAHVSHEPLHCLVVKCGMVNDISVV------TSLVCAYSRCGCLVSAERLYA 305
Query: 486 EGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLV 545
K I+ S++S Y++ G+ +++ + +K D V +G+L C S +
Sbjct: 306 SAK--QDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHI 363
Query: 546 DKGKEIFKEMVDLYGY 561
D G + L+GY
Sbjct: 364 DIG-------MSLHGY 372
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 168/596 (28%), Positives = 304/596 (51%), Gaps = 46/596 (7%)
Query: 146 VHAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAFESGK 204
+HA+IV + + + + L+ Y + + F A + ++V A+ N + A+ S +
Sbjct: 44 LHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRN-AFSYNALLIAYTSRE 102
Query: 205 ME-ECFQLF------SRMRKENIQPNSIT---VINLLRSTVDLHLLKIGQALHSLIIVSN 254
M + F LF S + +P+SI+ V+ L D L + + +H +I
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 255 LCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVY 314
++ V +++ Y K +++ AR +F++M D+V WN M+S Y+ +G ++ ++
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 315 CMVR-SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSAC 373
M+ S +P+ T I + Q +G ++H +I N +S+ NA+I Y+ C
Sbjct: 223 AMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKC 282
Query: 374 NGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMK--------------- 418
L+ AR +FD +++K V++ A+I + H EA++LF EM+
Sbjct: 283 GSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLM 342
Query: 419 ----------------LCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXX 462
CG+R + + + ++LP+ L + +H +
Sbjct: 343 QNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIY 402
Query: 463 XETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKL 522
TS++ +YAK G + A+++FD K + +IAW ++I+AY+ HG+ L++QM+
Sbjct: 403 VTTSIIDNYAKLGFLLGAQRVFDNCKD--RSLIAWTAIITAYAVHGDSDSACSLFDQMQC 460
Query: 523 SNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQID 582
KPD VT +L+A +SG D + IF M+ Y +P EH+ACMV +L RAG++
Sbjct: 461 LGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLS 520
Query: 583 EASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYA 642
+A + I +P++ A+V+G LL+ + D +A A +L MEP+N GNY +++N+Y
Sbjct: 521 DAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYT 580
Query: 643 AAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILK 698
AG+W++ +R+ ++ GLKK PG SW+E+ + F D S RS ++Y I++
Sbjct: 581 QAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIE 636
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 215/444 (48%), Gaps = 43/444 (9%)
Query: 40 PQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRN 99
P H+ Q+HAR + + ++ L+SKL+ YT+ + VF ++ Y+A+L
Sbjct: 38 PLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIA 97
Query: 100 LSQFGEHEKTLFLYKEMVEKSMY------PDEESCSFVLRSCFSVSH----EQGKMVHAQ 149
+ + L+ + S Y PD S S VL++ + VH
Sbjct: 98 YTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGF 157
Query: 150 IVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEEC 208
+++ G D+ V N ++ Y K + +A + + MS ++ WN+MIS +SG E+C
Sbjct: 158 VIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDC 217
Query: 209 FQLFSRMRK-ENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLS 267
+++ M + +PN +TVI++ ++ L G +H +I +++ +L++ A++
Sbjct: 218 KKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIG 277
Query: 268 MYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLEL--------------- 312
Y K GSL AR +F++M D V + ++S Y +G KE++ L
Sbjct: 278 FYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAM 337
Query: 313 ----------------VYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGS 356
M+R G RP+ T + S+T + + GK++HA IRNG+
Sbjct: 338 ISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGA 397
Query: 357 DYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIE 416
D + V ++ID Y+ L A+R+FD D+++++W+A+I A+AVH A SLF +
Sbjct: 398 DNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQ 457
Query: 417 MKLCGTRVDFIIVINILPTFAKIG 440
M+ GT+ D + + +L FA G
Sbjct: 458 MQCLGTKPDDVTLTAVLSAFAHSG 481
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 115/258 (44%), Gaps = 5/258 (1%)
Query: 47 HARFFLHGLHQNSSLS-SKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGE 105
+AR + + S++ ++ Y GL + +F E+ ++A++ L Q
Sbjct: 287 YARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNH 346
Query: 106 HEKTLFLYKEMVEKSMYPDEESCSFVLRS-CFSVSHEQGKMVHAQIVKLGMDAFDLVRNS 164
HE+ + ++EM+ P+ + S +L S +S + + GK +HA ++ G D V S
Sbjct: 347 HEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTS 406
Query: 165 LVELYEKNGF-LNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPN 223
+++ Y K GF L A + L W +I+ G + LF +M+ +P+
Sbjct: 407 IIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPD 466
Query: 224 SITVINLLRSTVDLHLLKIGQAL-HSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMF 282
+T+ +L + + Q + S++ ++ + ++S+ + G L DA
Sbjct: 467 DVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFI 526
Query: 283 EKMPRNDLV-VWNIMVSA 299
KMP + + VW +++
Sbjct: 527 SKMPIDPIAKVWGALLNG 544
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 149/436 (34%), Positives = 252/436 (57%), Gaps = 5/436 (1%)
Query: 265 LLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPD 324
L++ YV+ G L +AR +F++MP L WN M++ +E L L M G PD
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 325 MFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFD 384
+T S L+ G+Q+H + I+ G + + V+++L MY L +
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 385 LITDKTVVSWSAMIKAHAVHDQCLEA-LSLFIEMKLCGTRVDFIIVINILPTFAKIGALH 443
+ + +V+W+ +I +A + C E L L+ MK+ G R + I + +L + + +
Sbjct: 151 SMPVRNLVAWNTLIMGNA-QNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRG 209
Query: 444 YVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISA 503
+ +H +SL++ Y+KCGC+ A K F E +D + W+SMISA
Sbjct: 210 QGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSE--REDEDEVMWSSMISA 267
Query: 504 YSKHGEWFQCFELYNQM-KLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQ 562
Y HG+ + EL+N M + +N++ ++V FL LL AC +SGL DKG E+F MV+ YG++
Sbjct: 268 YGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK 327
Query: 563 PSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQK 622
P +H+ C+VDLLGRAG +D+A II ++P+ +D ++ LLSAC +H + +A+ ++
Sbjct: 328 PGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKE 387
Query: 623 LINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRV 682
++ ++P ++ YVLL+N++A+A +W V+++R +RD+ +KK G SW E G+VH+F++
Sbjct: 388 ILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKM 447
Query: 683 ADQSHPRSVDIYSILK 698
D+S +S +IYS LK
Sbjct: 448 GDRSQSKSKEIYSYLK 463
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 163/348 (46%), Gaps = 4/348 (1%)
Query: 163 NSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQ 221
N L+ Y + G +NA + + M +L WN MI+ + EE LF M
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 222 PNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLM 281
P+ T+ ++ + L + IGQ +H I L +L VN++L MY++ G L+D ++
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIV 148
Query: 282 FEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHT 341
MP +LV WN ++ A NGCP+ L L M SG RP+ T + +SS + L
Sbjct: 149 IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIR 208
Query: 342 EWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAH 401
G+Q+HA I+ G+ V+V ++LI MYS C L A + F D+ V WS+MI A+
Sbjct: 209 GQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAY 268
Query: 402 AVHDQCLEALSLFIEM-KLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXX 460
H Q EA+ LF M + ++ + +N+L + G L
Sbjct: 269 GFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKP 328
Query: 461 XXXE-TSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKH 507
T ++ + GC++ A + DI+ W +++SA + H
Sbjct: 329 GLKHYTCVVDLLGRAGCLDQAEAII-RSMPIKTDIVIWKTLLSACNIH 375
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 175/372 (47%), Gaps = 17/372 (4%)
Query: 57 QNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDS--VIYSAILRNLSQFGEHEKTLFLYK 114
+N S+ L++ Y + G ++KVF E PD ++A++ L QF +E+ L L++
Sbjct: 23 KNYMSSNILINGYVRAGDLVNARKVF--DEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFR 80
Query: 115 EMVEKSMYPDEESCSFVLRSCFSVSH-----EQGKMVHAQIVKLGMDAFDLVRNSLVELY 169
EM PDE + L S FS S G+ +H +K G++ +V +SL +Y
Sbjct: 81 EMHGLGFSPDE----YTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMY 136
Query: 170 EKNGFLNAHE-PLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVI 228
+NG L E + M V L WN +I ++G E L+ M+ +PN IT +
Sbjct: 137 MRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFV 196
Query: 229 NLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRN 288
+L S DL + GQ +H+ I + V ++L+SMY K G L DA F +
Sbjct: 197 TVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDE 256
Query: 289 DLVVWNIMVSAYAGNGCPKESLELVYCMV-RSGVRPDMFTAIPAISSITQLKHTEWGKQM 347
D V+W+ M+SAY +G E++EL M ++ + + + + + + + G ++
Sbjct: 257 DEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLEL 316
Query: 348 HAHVI-RNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKT-VVSWSAMIKAHAVHD 405
++ + G + + ++D+ L+ A I + KT +V W ++ A +H
Sbjct: 317 FDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHK 376
Query: 406 QCLEALSLFIEM 417
A +F E+
Sbjct: 377 NAEMAQRVFKEI 388
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 124/261 (47%), Gaps = 5/261 (1%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQF 103
QQIH +GL + ++S L Y + G + V + V ++ ++ +Q
Sbjct: 111 QQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQN 170
Query: 104 GEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVS-HEQGKMVHAQIVKLGMDAFDLVR 162
G E L+LYK M P++ + VL SC ++ QG+ +HA+ +K+G + V
Sbjct: 171 GCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVV 230
Query: 163 NSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKE-NI 220
+SL+ +Y K G L +A + + W++MIS G+ +E +LF+ M ++ N+
Sbjct: 231 SSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNM 290
Query: 221 QPNSITVINLLRSTVDLHLLKIGQALHSLIIVS-NLCGELTVNTALLSMYVKLGSLKDAR 279
+ N + +NLL + L G L +++ L T ++ + + G L A
Sbjct: 291 EINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAE 350
Query: 280 LMFEKMP-RNDLVVWNIMVSA 299
+ MP + D+V+W ++SA
Sbjct: 351 AIIRSMPIKTDIVIWKTLLSA 371
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 164/541 (30%), Positives = 288/541 (53%), Gaps = 13/541 (2%)
Query: 163 NSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQ 221
N +V+ Y K+ ++ A + + + + +N +IS ++ + LF RMRK +
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFE 137
Query: 222 PNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLM 281
+ T+ L+ + D + + + LH + +VN A ++ Y K G L++A +
Sbjct: 138 VDGFTLSGLIAACCDR--VDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV 195
Query: 282 FEKMPR-NDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKH 340
F M D V WN M+ AY + ++L L M+ G + DMFT ++++T L H
Sbjct: 196 FYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDH 255
Query: 341 TEWGKQMHAHVIRNGSDYQVSVHNALIDMYS---ACNGLNSARRIFDLITDKTVVSWSAM 397
G+Q H +I+ G V + LID YS C+G+ + ++F I +V W+ M
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTM 315
Query: 398 IKAHAVHDQ-CLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXX 456
I ++++++ EA+ F +M+ G R D + + + + + + +HG
Sbjct: 316 ISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSH 375
Query: 457 X-XXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFE 515
+L++ Y K G ++ AR +FD + + +++N MI Y++HG +
Sbjct: 376 IPSNRISVNNALISLYYKSGNLQDARWVFD--RMPELNAVSFNCMIKGYAQHGHGTEALL 433
Query: 516 LYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLL 575
LY +M S + P+++TF+ +L+AC + G VD+G+E F M + + +P EH++CM+DLL
Sbjct: 434 LYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLL 493
Query: 576 GRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYV 635
GRAG+++EA + I+ +P + + LL AC+ H + LAE AA +L+ M+P A YV
Sbjct: 494 GRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYV 553
Query: 636 LLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHP--RSVDI 693
+L+N+YA A KW+++A +R +R + ++K PGCSW+E + H F D SHP R V+
Sbjct: 554 MLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNE 613
Query: 694 Y 694
Y
Sbjct: 614 Y 614
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 193/393 (49%), Gaps = 11/393 (2%)
Query: 23 FQTRFFTTSSLLD-LCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKV 81
F+ FT S L+ C + ++Q+H G SS+++ + Y+K GL + V
Sbjct: 136 FEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV 195
Query: 82 FY-FTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH 140
FY E D V +++++ Q E K L LYKEM+ K D + + VL + S+ H
Sbjct: 196 FYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDH 255
Query: 141 E-QGKMVHAQIVKLGMDAFDLVRNSLVELYEK----NGFLNAHEPLEGMSVTELAYWNNM 195
G+ H +++K G V + L++ Y K +G ++ + + + +L WN M
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTM 315
Query: 196 ISQAFESGKM-EECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSN 254
IS + ++ EE + F +M++ +P+ + + + + +L + +H L I S+
Sbjct: 316 ISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSH 375
Query: 255 L-CGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELV 313
+ ++VN AL+S+Y K G+L+DAR +F++MP + V +N M+ YA +G E+L L
Sbjct: 376 IPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLY 435
Query: 314 YCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGS-DYQVSVHNALIDMYSA 372
M+ SG+ P+ T + +S+ + G++ + + + ++ +ID+
Sbjct: 436 QRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGR 495
Query: 373 CNGLNSARRIFDLITDKT-VVSWSAMIKAHAVH 404
L A R D + K V+W+A++ A H
Sbjct: 496 AGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 124/534 (23%), Positives = 224/534 (41%), Gaps = 45/534 (8%)
Query: 13 IRKIPYIVAPFQTRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKF 72
+ + P+ F+ + + DL T + +HA + + ++ LS+ ++ Y+K
Sbjct: 1 MNQTPWKFKTFRDLLLKSVAERDLFTG----KSLHALYVKSIVASSTYLSNHFVNLYSKC 56
Query: 73 GLPGLSQKVFYFTE-------------------------------NPDSVIYSAILRNLS 101
G ++ FY TE PD+V Y+ ++ +
Sbjct: 57 GRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYA 116
Query: 102 QFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMVHAQIVKLGMDAFDLV 161
E + L+K M + D + S ++ +C + K +H V G D++ V
Sbjct: 117 DARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCD-RVDLIKQLHCFSVSGGFDSYSSV 175
Query: 162 RNSLVELYEKNGFLN-AHEPLEGMS-VTELAYWNNMISQAFESGKMEECFQLFSRMRKEN 219
N+ V Y K G L A GM + + WN+MI + + + L+ M +
Sbjct: 176 NNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKG 235
Query: 220 IQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLG---SLK 276
+ + T+ ++L + L L G+ H +I + V + L+ Y K G +
Sbjct: 236 FKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMY 295
Query: 277 DARLMFEKMPRNDLVVWNIMVSAYAGN-GCPKESLELVYCMVRSGVRPDMFTAIPAISSI 335
D+ +F+++ DLVVWN M+S Y+ N +E+++ M R G RPD + + S+
Sbjct: 296 DSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSAC 355
Query: 336 TQLKHTEWGKQMHAHVIRNG-SDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSW 394
+ L KQ+H I++ ++SV+NALI +Y L AR +FD + + VS+
Sbjct: 356 SNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSF 415
Query: 395 SAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVR-YLHGYXX 453
+ MIK +A H EAL L+ M G + I + +L A G + + Y +
Sbjct: 416 NCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKE 475
Query: 454 XXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKH 507
+ ++ + G +E A + D +AW +++ A KH
Sbjct: 476 TFKIEPEAEHYSCMIDLLGRAGKLEEAERFID-AMPYKPGSVAWAALLGACRKH 528
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 279 bits (713), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 194/692 (28%), Positives = 347/692 (50%), Gaps = 23/692 (3%)
Query: 20 VAPFQTRFF-----TTSSLLDLCTKP------QHLQQIHARFFLHGL---HQNSSLSSKL 65
+ FQ FF SS+++L K + +QIHA G ++ ++ L
Sbjct: 79 LGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNL 138
Query: 66 MDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLF-LYKEMVEKSMYPD 124
+ Y + G ++KVF + + V Y+A+ S+ + F L M + + P+
Sbjct: 139 ISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPN 198
Query: 125 EESCSFVLRSCFSVSHE-QGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLE 182
+ + +++ C + G +++QI+KLG +V+ S++ +Y G L +A +
Sbjct: 199 SSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFD 258
Query: 183 GMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKI 242
++ + WN MI + ++ K+E+ F M + P T +L L +
Sbjct: 259 CVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSL 318
Query: 243 GQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAG 302
G+ +H+ IIVS+ +L ++ ALL MY G +++A +F ++ +LV WN ++S +
Sbjct: 319 GKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSE 378
Query: 303 NGCPKESLELVYCMVR-SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVS 361
NG ++++ + ++R S RPD +T AIS+ + + GK +H V + G + V
Sbjct: 379 NGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVF 438
Query: 362 VHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCG 421
V L+ MY SA+++FD++ ++ VV W+ MI H+ A+ FIEM
Sbjct: 439 VGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREK 498
Query: 422 TRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMAR 481
R D + +++ + + L H +L+ Y K G E A
Sbjct: 499 NRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAE 558
Query: 482 KLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVN 541
+F +S+ D+ WNSM+ AYS+HG + + Q+ + PD VT+L LL AC +
Sbjct: 559 TIFS--LASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSH 616
Query: 542 SGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIE-TVPLNSDARVY 600
G +GK ++ +M + G + +H++CMV+L+ +AG +DEA ++IE + P N+ A ++
Sbjct: 617 RGSTLQGKFLWNQMKE-QGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELW 675
Query: 601 GPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDR 660
LLSAC + ++ AA++++ ++P++ ++LLSN+YA G+W+ VA+MR +R
Sbjct: 676 RTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGL 735
Query: 661 GLKKTPGCSWLE-SNGQVHEFRVADQSHPRSV 691
K PG SW+E +N F DQS+P V
Sbjct: 736 ASSKDPGLSWIEVNNNNTQVFSSGDQSNPEVV 767
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 172/398 (43%), Gaps = 24/398 (6%)
Query: 262 NTALLSMYVKLGSLKDARLMFEKMPRNDLVV---------WNIMVSAYAGNGCPKESLEL 312
N L+SMYV+ SL+ AR +F+KMP+ ++V + M S+ S ++
Sbjct: 25 NNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQM 84
Query: 313 VYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVS---VHNALIDM 369
++ M + + + SIT LK +Q+HA V+ G+ +N LI M
Sbjct: 85 IFFMPLNEIASSVVELTRKCVSITVLKR---ARQIHALVLTAGAGAATESPYANNNLISM 141
Query: 370 YSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVH-DQCLEALSLFIEMKLCGTRVDFII 428
Y C L AR++FD + + VVS++A+ A++ + D A L M + +
Sbjct: 142 YVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSST 201
Query: 429 VINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGK 488
+++ A + + L+ +TS+L Y+ CG +E AR++FD
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFD--C 259
Query: 489 SSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKG 548
+++D +AWN+MI K+ + + M +S V P Q T+ +L C G G
Sbjct: 260 VNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLG 319
Query: 549 KEIFKEMV--DLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSA 606
K I ++ D P ++D+ G + EA + + N + + ++S
Sbjct: 320 KLIHARIIVSDSLADLPLDN---ALLDMYCSCGDMREAFYVFGRIH-NPNLVSWNSIISG 375
Query: 607 CKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAA 644
C + A + ++L+ M Y + I A A
Sbjct: 376 CSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATA 413
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 278 bits (711), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 176/662 (26%), Positives = 336/662 (50%), Gaps = 7/662 (1%)
Query: 28 FTTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
FT SS++ C + + ++H G NS + S L D Y+K G + ++F
Sbjct: 125 FTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSS 184
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGK 144
+N D++ ++ ++ +L + + L Y EMV+ + P+E + +L + + E GK
Sbjct: 185 LQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGK 244
Query: 145 MVHAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAFESG 203
+H+ I+ G+ +++ SLV+ Y + + +A L ++ W +++S +
Sbjct: 245 TIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNL 304
Query: 204 KMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNT 263
+ +E F MR +QPN+ T +L + L G+ +HS I V
Sbjct: 305 RAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGN 364
Query: 264 ALLSMYVKLGSLK-DARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
AL+ MY+K + + +A +F M ++V W ++ +G ++ L+ MV+ V
Sbjct: 365 ALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVE 424
Query: 323 PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRI 382
P++ T + + ++L+H ++HA+++R D ++ V N+L+D Y++ ++ A +
Sbjct: 425 PNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNV 484
Query: 383 FDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGAL 442
+ + +++++++ + ALS+ M G R+D + + + A +GAL
Sbjct: 485 IRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGAL 544
Query: 443 HYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMIS 502
++LH Y SL+ Y+KCG +E A+K+F+E + D+++WN ++S
Sbjct: 545 ETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEE--IATPDVVSWNGLVS 602
Query: 503 AYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQ 562
+ +G + +M++ +PD VTFL LL+AC N L D G E F+ M +Y +
Sbjct: 603 GLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIE 662
Query: 563 PSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQK 622
P EH+ +V +LGRAG+++EA+ ++ET+ L +A ++ LL AC+ + L E A K
Sbjct: 663 PQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANK 722
Query: 623 LINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRV 682
+ + P + Y+LL+++Y +GK + K R+ + ++ L K G S +E G+VH F
Sbjct: 723 GLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVS 782
Query: 683 AD 684
D
Sbjct: 783 ED 784
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 157/647 (24%), Positives = 286/647 (44%), Gaps = 51/647 (7%)
Query: 46 IHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGE 105
IH GL +N L + L+ Y K ++K+F + ++ ++ ++ E
Sbjct: 45 IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQE 104
Query: 106 HEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDLVRNS 164
L L++EM+ +P+E + S V+RSC + G VH ++K G + +V +S
Sbjct: 105 FASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSS 164
Query: 165 LVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPN 223
L +LY K G F A E + + W MIS + K E Q +S M K + PN
Sbjct: 165 LSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPN 224
Query: 224 SITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFE 283
T + LL ++ L L+ G+ +HS IIV + + + T+L+ Y + ++DA +
Sbjct: 225 EFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLN 283
Query: 284 KMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEW 343
D+ +W +VS + N KE++ M G++P+ FT +S + ++ ++
Sbjct: 284 SSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDF 343
Query: 344 GKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLN-SARRIFDLITDKTVVSWSAMIKAHA 402
GKQ+H+ I+ G + V NAL+DMY C+ A R+F + VVSW+ +I
Sbjct: 344 GKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLV 403
Query: 403 VHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXX 462
H + L +EM + + + +L +K+ + V +H Y
Sbjct: 404 DHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMV 463
Query: 463 XETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKL 522
SL+ +YA ++ A + K +D I + S+++ +++ G+ + N M
Sbjct: 464 VGNSLVDAYASSRKVDYAWNVIRSMK--RRDNITYTSLVTRFNELGKHEMALSVINYMYG 521
Query: 523 SNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQID 582
++ DQ++ G ++A N G ++ GK + V G+ + +VD+ + G ++
Sbjct: 522 DGIRMDQLSLPGFISASANLGALETGKHLHCYSVK-SGFSGAASVLNSLVDMYSKCGSLE 580
Query: 583 EASKIIETVP----------------------------------LNSDARVYGPLLSACK 608
+A K+ E + D+ + LLSAC
Sbjct: 581 DAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSAC- 639
Query: 609 MHSDPRLAEVAAQ------KLINMEPKNAGNYVLLSNIYAAAGKWDK 649
S+ RL ++ + K+ N+EP+ +YV L I AG+ ++
Sbjct: 640 --SNGRLTDLGLEYFQVMKKIYNIEPQ-VEHYVHLVGILGRAGRLEE 683
Score = 166 bits (420), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 201/418 (48%), Gaps = 7/418 (1%)
Query: 125 EESCSFVLRSCFSVSHEQGKMVHAQIVKLGM-DAFDLVRNSLVELYEK-NGFLNAHEPLE 182
++SC +L C S S G +H ++K G+ + DL N+L+ LY K +G NA + +
Sbjct: 24 QKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLC-NNLLSLYLKTDGIWNARKLFD 82
Query: 183 GMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKI 242
MS + W MIS +S + LF M PN T +++RS L +
Sbjct: 83 EMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISY 142
Query: 243 GQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAG 302
G +H +I + G V ++L +Y K G K+A +F + D + W +M+S+ G
Sbjct: 143 GGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVG 202
Query: 303 NGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSV 362
+E+L+ MV++GV P+ FT + + + + L E+GK +H+++I G V +
Sbjct: 203 ARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVL 261
Query: 363 HNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGT 422
+L+D YS + + A R+ + ++ V W++++ + + EA+ F+EM+ G
Sbjct: 262 KTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGL 321
Query: 423 RVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEM-AR 481
+ + IL + + +L + + +H +L+ Y KC E+ A
Sbjct: 322 QPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEAS 381
Query: 482 KLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTAC 539
++F G ++++W ++I HG CF L +M V+P+ VT G+L AC
Sbjct: 382 RVF--GAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRAC 437
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 176/370 (47%), Gaps = 9/370 (2%)
Query: 219 NIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDA 278
N+Q + I +++ S +IG +H +I L L + LLS+Y+K + +A
Sbjct: 22 NLQKSCIRILSFCESNSS----RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNA 77
Query: 279 RLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQL 338
R +F++M + W +M+SA+ + +L L M+ SG P+ FT + S L
Sbjct: 78 RKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGL 137
Query: 339 KHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMI 398
+ +G ++H VI+ G + V ++L D+YS C A +F + + +SW+ MI
Sbjct: 138 RDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMI 197
Query: 399 KAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXX 458
+ + EAL + EM G + + +L + +G L + + +H
Sbjct: 198 SSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIP 256
Query: 459 XXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYN 518
+TSL+ Y++ +E A ++ + S +D+ W S++S + ++ + +
Sbjct: 257 LNVVLKTSLVDFYSQFSKMEDAVRVLN--SSGEQDVFLWTSVVSGFVRNLRAKEAVGTFL 314
Query: 519 QMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRA 578
+M+ ++P+ T+ +L+ C +D GK+I + + + G++ S + +VD+ +
Sbjct: 315 EMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKV-GFEDSTDVGNALVDMYMKC 373
Query: 579 GQID-EASKI 587
+ EAS++
Sbjct: 374 SASEVEASRV 383
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 191/672 (28%), Positives = 310/672 (46%), Gaps = 108/672 (16%)
Query: 132 LRSCFSV---SHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVT 187
LR C + S + + VH I+ G + N L+++Y K+ LN A + + +S
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78
Query: 188 ELAYWNNMISQAFESG----------KMEECFQ-----------------------LFSR 214
+ M+S SG K C + LF +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 215 MRKENIQPNSITVINLL----------RSTVDLHL--LKIGQAL-----HSLIIVSNLCG 257
M+ E +P++ T ++L + V H LK G ++L+ V + C
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 258 -------------------ELTVNTALLSMYVKLGSLKDARLMFEKMPRN-DLVVWNIMV 297
+ T +++ YVK G + E M N LV +N M+
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 298 SAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSD 357
S Y G +E+LE+V MV SG+ D FT I + + GKQ+HA+V+R D
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR-ED 317
Query: 358 YQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEM 417
+ N+L+ +Y C + AR IF+ + K +VSW+A++ + EA +F EM
Sbjct: 318 FSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Query: 418 K---------------------------LCGTRVDF----IIVINILPTFAKIGALHYVR 446
K C R F + + A +GA +
Sbjct: 378 KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 447 YLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSK 506
H +L+ YAKCG +E AR++F D ++WN++I+A +
Sbjct: 438 QYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC--LDSVSWNALIAALGQ 495
Query: 507 HGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQE 566
HG + ++Y +M ++PD++T L +LTAC ++GLVD+G++ F M +Y P +
Sbjct: 496 HGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGAD 555
Query: 567 HHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINM 626
H+A ++DLL R+G+ +A +IE++P A ++ LLS C++H + L +AA KL +
Sbjct: 556 HYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGL 615
Query: 627 EPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQS 686
P++ G Y+LLSN++AA G+W++VA++R +RDRG+KK CSW+E QVH F V D S
Sbjct: 616 IPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTS 675
Query: 687 HPRSVDIYSILK 698
HP + +Y L+
Sbjct: 676 HPEAEAVYIYLQ 687
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 213/497 (42%), Gaps = 80/497 (16%)
Query: 19 IVAPFQTRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLS-SKLMDCYTKFGLPGL 77
I FQ R + L+D+ K L +AR + + ++ + ++ Y G L
Sbjct: 41 ITFGFQPRAHILNRLIDVYCKSSELN--YARQLFDEISEPDKIARTTMVSGYCASGDITL 98
Query: 78 SQKVFYFTENP----DSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLR 133
++ VF + P D+V+Y+A++ S + + L+ +M + PD + + VL
Sbjct: 99 ARGVF--EKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLA 156
Query: 134 SCFSVSHEQGKMV--HAQIVKLGMDAFDLVRNSLVELYEK-------------------- 171
V+ ++ + V HA +K G V N+LV +Y K
Sbjct: 157 GLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILE 216
Query: 172 ---------------NGFLN-AHEPLEGMSVT-ELAYWNNMISQAFESGKMEECFQLFSR 214
NG+ + E LEGM +L +N MIS G +E ++ R
Sbjct: 217 KDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRR 276
Query: 215 MRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGS 274
M I+ + T +++R+ LL++G+ +H+ ++ + +L+S+Y K G
Sbjct: 277 MVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF-SFHFDNSLVSLYYKCGK 335
Query: 275 LKDARLMFEKMPRNDLVVWN-------------------------------IMVSAYAGN 303
+AR +FEKMP DLV WN IM+S A N
Sbjct: 336 FDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAEN 395
Query: 304 GCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVH 363
G +E L+L CM R G P + AI S L G+Q HA +++ G D +S
Sbjct: 396 GFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAG 455
Query: 364 NALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTR 423
NALI MY+ C + AR++F + VSW+A+I A H EA+ ++ EM G R
Sbjct: 456 NALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIR 515
Query: 424 VDFIIVINILPTFAKIG 440
D I ++ +L + G
Sbjct: 516 PDRITLLTVLTACSHAG 532
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 177/413 (42%), Gaps = 45/413 (10%)
Query: 32 SLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFY-FTENPDS 90
S+ C L + F L ++ + +M Y K G L +++ +N
Sbjct: 192 SVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKL 251
Query: 91 VIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQ 149
V Y+A++ G +++ L + + MV + DE + V+R+C + Q GK VHA
Sbjct: 252 VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAY 311
Query: 150 IVKLGMDAFDLVRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNN-------------- 194
+++ +F NSLV LY K G F A E M +L WN
Sbjct: 312 VLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEA 370
Query: 195 -----------------MISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDL 237
MIS E+G EE +LFS M++E +P ++S L
Sbjct: 371 KLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVL 430
Query: 238 HLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMV 297
GQ H+ ++ L+ AL++MY K G +++AR +F MP D V WN ++
Sbjct: 431 GAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALI 490
Query: 298 SAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMH-----AHVI 352
+A +G E++++ M++ G+RPD T + +++ + + G++ + I
Sbjct: 491 AALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRI 550
Query: 353 RNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDK-TVVSWSAMIKAHAVH 404
G+D+ + LID+ + A + + + K T W A++ VH
Sbjct: 551 PPGADH----YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVH 599
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/540 (29%), Positives = 283/540 (52%), Gaps = 6/540 (1%)
Query: 160 LVRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKE 218
+V NSL+ LY K G ++A + + M + ++ N + + + E F L RM
Sbjct: 91 VVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGS 150
Query: 219 N-IQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKD 277
++T++ + T + L + + +H+L I+S E++V L++ Y K G
Sbjct: 151 GGFDHATLTIVLSVCDTPEFCL--VTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVS 208
Query: 278 ARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQ 337
R +F+ M +++ ++S N ++ L L M R V P+ T + A+++ +
Sbjct: 209 GRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSG 268
Query: 338 LKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAM 397
+ G+Q+HA + + G + ++ + +AL+DMYS C + A IF+ T+ VS + +
Sbjct: 269 SQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVI 328
Query: 398 IKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXX 457
+ A + EA+ FI M G +D +V +L +L + LH
Sbjct: 329 LVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKF 388
Query: 458 XXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELY 517
L+ Y+KCG + ++ +F + ++ ++WNSMI+A+++HG +LY
Sbjct: 389 SGNTFVNNGLINMYSKCGDLTDSQTVFR--RMPKRNYVSWNSMIAAFARHGHGLAALKLY 446
Query: 518 NQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGR 577
+M VKP VTFL LL AC + GL+DKG+E+ EM +++G +P EH+ C++D+LGR
Sbjct: 447 EEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGR 506
Query: 578 AGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLL 637
AG + EA I+++PL D +++ LL AC H D + E AA++L P ++ ++L+
Sbjct: 507 AGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILI 566
Query: 638 SNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
+NIY++ GKW + AK ++ G+ K G S +E + H F V D+ HP++ IY +L
Sbjct: 567 ANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVL 626
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 126/280 (45%), Gaps = 7/280 (2%)
Query: 32 SLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENP 88
S L C+ Q + QQIHA + +G+ + S LMD Y+K G + +F T
Sbjct: 261 SALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEV 320
Query: 89 DSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCF-SVSHEQGKMVH 147
D V + IL L+Q G E+ + + M++ + D S VL F S GK +H
Sbjct: 321 DEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLH 380
Query: 148 AQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKME 206
+ ++K V N L+ +Y K G L ++ M WN+MI+ G
Sbjct: 381 SLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGL 440
Query: 207 ECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIG-QALHSLIIVSNLCGELTVNTAL 265
+L+ M ++P +T ++LL + + L+ G + L+ + V + T +
Sbjct: 441 AALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCI 500
Query: 266 LSMYVKLGSLKDARLMFEKMP-RNDLVVWNIMVSAYAGNG 304
+ M + G LK+A+ + +P + D +W ++ A + +G
Sbjct: 501 IDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHG 540
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 276 bits (705), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 156/482 (32%), Positives = 263/482 (54%), Gaps = 7/482 (1%)
Query: 219 NIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDA 278
++ N ++I ++S V + L ++ LH ++ S + L+ Y++LG A
Sbjct: 29 SLDANVSSLIAAVKSCVSIELCRL---LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCA 85
Query: 279 RLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRS--GVRPDMFTAIPAISSIT 336
+F++MP DLV WN ++S Y+G G + E++ M+ S G RP+ T + IS+
Sbjct: 86 EKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACV 145
Query: 337 QLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSA 396
E G+ +H V++ G +V V NA I+ Y L S+ ++F+ ++ K +VSW+
Sbjct: 146 YGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNT 205
Query: 397 MIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXX 456
MI H + + L+ F + G D + +L + +G + + +HG
Sbjct: 206 MIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGG 265
Query: 457 XXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFEL 516
T+LL Y+K G +E + +F E S D +AW +M++AY+ HG +
Sbjct: 266 FSGNKCITTALLDLYSKLGRLEDSSTVFHEITSP--DSMAWTAMLAAYATHGFGRDAIKH 323
Query: 517 YNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLG 576
+ M + PD VTF LL AC +SGLV++GK F+ M Y P +H++CMVDLLG
Sbjct: 324 FELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLG 383
Query: 577 RAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVL 636
R+G + +A +I+ +P+ + V+G LL AC+++ D +L AA++L +EP++ NYV+
Sbjct: 384 RSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVM 443
Query: 637 LSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSI 696
LSNIY+A+G W +++R+ ++ +GL + GCS++E ++H+F V D SHP S I
Sbjct: 444 LSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKK 503
Query: 697 LK 698
LK
Sbjct: 504 LK 505
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 182/377 (48%), Gaps = 12/377 (3%)
Query: 34 LDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIY 93
++LC + H + + + + HG + +L+ CY + G ++K+F D V +
Sbjct: 47 IELC-RLLHCKVVKSVSYRHGF-----IGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSW 100
Query: 94 SAILRNLSQFGEHEKTLFLYKEMV--EKSMYPDEESCSFVLRSC-FSVSHEQGKMVHAQI 150
++++ S G K + M+ E P+E + ++ +C + S E+G+ +H +
Sbjct: 101 NSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLV 160
Query: 151 VKLGMDAFDLVRNSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFESGKMEECF 209
+K G+ V N+ + Y K G L + L E +S+ L WN MI ++G E+
Sbjct: 161 MKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGL 220
Query: 210 QLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMY 269
F+ R+ +P+ T + +LRS D+ ++++ Q +H LI+ G + TALL +Y
Sbjct: 221 AYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLY 280
Query: 270 VKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAI 329
KLG L+D+ +F ++ D + W M++AYA +G +++++ MV G+ PD T
Sbjct: 281 SKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFT 340
Query: 330 PAISSITQLKHTEWGKQ-MHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIF-DLIT 387
+++ + E GK R D ++ ++ ++D+ L A + ++
Sbjct: 341 HLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPM 400
Query: 388 DKTVVSWSAMIKAHAVH 404
+ + W A++ A V+
Sbjct: 401 EPSSGVWGALLGACRVY 417
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 275 bits (704), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 151/426 (35%), Positives = 247/426 (57%), Gaps = 5/426 (1%)
Query: 278 ARLMFEKMPRN-DLVVWNIMVSAYAGNGCPKESLELVYCMVRSG-VRPDMFTAIPAISSI 335
A +F K+ + ++ +WN ++ YA G + L M SG V PD T I ++
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 336 TQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWS 395
T + G+ +H+ VIR+G + V N+L+ +Y+ C + SA ++FD + +K +V+W+
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 396 AMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXX 455
++I A + + EAL+L+ EM G + D ++++L AKIGAL + +H Y
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 456 XXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFE 515
LL YA+CG +E A+ LFDE K+ ++W S+I + +G + E
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDE--MVDKNSVSWTSLIVGLAVNGFGKEAIE 309
Query: 516 LYNQMKLS-NVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDL 574
L+ M+ + + P ++TF+G+L AC + G+V +G E F+ M + Y +P EH CMVDL
Sbjct: 310 LFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDL 369
Query: 575 LGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNY 634
L RAGQ+ +A + I+++P+ + ++ LL AC +H D LAE A +++ +EP ++G+Y
Sbjct: 370 LARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDY 429
Query: 635 VLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIY 694
VLLSN+YA+ +W V K+R + G+KK PG S +E +VHEF + D+SHP+S IY
Sbjct: 430 VLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIY 489
Query: 695 SILKVM 700
+ LK M
Sbjct: 490 AKLKEM 495
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 127/228 (55%), Gaps = 1/228 (0%)
Query: 192 WNNMISQAFESGKMEECFQLFSRMRKEN-IQPNSITVINLLRSTVDLHLLKIGQALHSLI 250
WN +I E G F L+ MR ++P++ T L+++ + +++G+ +HS++
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 251 IVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESL 310
I S + V +LL +Y G + A +F+KMP DLV WN +++ +A NG P+E+L
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 311 ELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMY 370
L M G++PD FT + +S+ ++ GK++H ++I+ G + N L+D+Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 371 SACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMK 418
+ C + A+ +FD + DK VSW+++I AV+ EA+ LF M+
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 315
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 125/288 (43%), Gaps = 11/288 (3%)
Query: 22 PFQTRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKV 81
PF + TT + + L + IH+ G + + L+ Y G + KV
Sbjct: 125 PFLIKAVTTMADVRLG------ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKV 178
Query: 82 FYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH- 140
F D V +++++ ++ G+ E+ L LY EM K + PD + +L +C +
Sbjct: 179 FDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGAL 238
Query: 141 EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQA 199
GK VH ++K+G+ N L++LY + G + + L + M W ++I
Sbjct: 239 TLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGL 298
Query: 200 FESGKMEECFQLFSRMRK-ENIQPNSITVINLLRSTVDLHLLKIG-QALHSLIIVSNLCG 257
+G +E +LF M E + P IT + +L + ++K G + + +
Sbjct: 299 AVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEP 358
Query: 258 ELTVNTALLSMYVKLGSLKDARLMFEKMP-RNDLVVWNIMVSAYAGNG 304
+ ++ + + G +K A + MP + ++V+W ++ A +G
Sbjct: 359 RIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 275 bits (704), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 161/514 (31%), Positives = 269/514 (52%), Gaps = 50/514 (9%)
Query: 226 TVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKD--ARLMFE 283
++I+ L ++L+ +K +H ++ L + T L+ KLG D AR + E
Sbjct: 51 SLISKLDDCINLNQIK---QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 284 KMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEW 343
+ + +W ++ YA G E++ + CM + + P FT + + +K
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 344 GKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWS-------- 395
G+Q HA R V V N +IDMY C ++ AR++FD + ++ V+SW+
Sbjct: 168 GRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYAR 227
Query: 396 -----------------------AMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINI 432
AM+ A + + EAL F M+ G R D + V
Sbjct: 228 VGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGY 287
Query: 433 LPTFAKIGALHY------VRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDE 486
+ A++GA Y + GY ++L+ Y+KCG +E A +F
Sbjct: 288 ISACAQLGASKYADRAVQIAQKSGYSPSDHVVIG----SALIDMYSKCGNVEEAVNVF-- 341
Query: 487 GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQM-KLSNVKPDQVTFLGLLTACVNSGLV 545
++K++ ++SMI + HG + L++ M + +KP+ VTF+G L AC +SGLV
Sbjct: 342 MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLV 401
Query: 546 DKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLS 605
D+G+++F M +G QP+++H+ CMVDLLGR G++ EA ++I+T+ + V+G LL
Sbjct: 402 DQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLG 461
Query: 606 ACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKT 665
AC++H++P +AE+AA+ L +EP GNY+LLSN+YA+AG W V ++R ++++GLKKT
Sbjct: 462 ACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKT 521
Query: 666 PGCSW-LESNGQVHEFRVADQSHPRSVDIYSILK 698
P SW ++ NGQ+H+F + +HP S I L+
Sbjct: 522 PAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLE 555
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 142/322 (44%), Gaps = 44/322 (13%)
Query: 132 LRSCFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL---NAHEPLEGMSVTE 188
L C +++ Q K +H +++ G+D + L+ K G A +E +
Sbjct: 56 LDDCINLN--QIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRN 113
Query: 189 LAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHS 248
W +I GK +E ++ MRKE I P S T LL++ + L +G+ H+
Sbjct: 114 PFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHA 173
Query: 249 LII-VSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRN------------------- 288
+ C NT ++ MYVK S+ AR +F++MP
Sbjct: 174 QTFRLRGFCFVYVGNT-MIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNME 232
Query: 289 ------------DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSIT 336
D+V W MV+ +A N P+E+LE M +SG+R D T IS+
Sbjct: 233 CAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACA 292
Query: 337 QLKHTEWGKQMHAHVIRNGSDYQVSVH----NALIDMYSACNGLNSARRIFDLITDKTVV 392
QL +++ + A I S Y S H +ALIDMYS C + A +F + +K V
Sbjct: 293 QLGASKYADR--AVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVF 350
Query: 393 SWSAMIKAHAVHDQCLEALSLF 414
++S+MI A H + EAL LF
Sbjct: 351 TYSSMILGLATHGRAQEALHLF 372
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/465 (20%), Positives = 205/465 (44%), Gaps = 54/465 (11%)
Query: 32 SLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLP--GLSQKVFYFTENPD 89
S LD C ++QIH GL Q+ + +KL+ TK G+P +++V + +
Sbjct: 54 SKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRN 113
Query: 90 SVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHA 148
+++A++R + G+ ++ + +Y M ++ + P + S +L++C ++ G+ HA
Sbjct: 114 PFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHA 173
Query: 149 QIVKLGMDAFDLVRNSLVELYEKNGFLN-------------------------------- 176
Q +L F V N+++++Y K ++
Sbjct: 174 QTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMEC 233
Query: 177 AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVD 236
A E E + ++ W M++ ++ K +E + F RM K I+ + +TV + +
Sbjct: 234 AAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQ 293
Query: 237 LHLLKIGQALHSLIIVSNL--CGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWN 294
L K + S + + +AL+ MY K G++++A +F M ++ ++
Sbjct: 294 LGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYS 353
Query: 295 IMVSAYAGNGCPKESLELVYCMV-RSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIR 353
M+ A +G +E+L L + MV ++ ++P+ T + A+ + + + G+Q+ + +
Sbjct: 354 SMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQ 413
Query: 354 N-GSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVS----WSAMIKAHAVHDQC- 407
G + ++D+ L A +LI +V W A++ A +H+
Sbjct: 414 TFGVQPTRDHYTCMVDLLGRTGRLQEA---LELIKTMSVEPHGGVWGALLGACRIHNNPE 470
Query: 408 ---LEALSLF-IEMKLCGTRVDFIIVINILPTFAKIGALHYVRYL 448
+ A LF +E + G ++I++ N+ + G + VR L
Sbjct: 471 IAEIAAEHLFELEPDIIG---NYILLSNVYASAGDWGGVLRVRKL 512
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 273 bits (699), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 187/648 (28%), Positives = 332/648 (51%), Gaps = 22/648 (3%)
Query: 32 SLLDLCTKPQHLQQIHARFFLHGLHQNS----SLSSKLMDCYTKFGLPGLSQKVFYFTEN 87
SL +L L++ LHGL + SS L+D Y ++ VF
Sbjct: 203 SLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWR 262
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMV 146
D + ++ + G E+ L L+ M + ++ + + L++ V +G +
Sbjct: 263 KDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAI 322
Query: 147 HAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFESGKM 205
H V+ G+ V SL+ +Y K G L E L + ++ W+ MI+ ++G+
Sbjct: 323 HDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQH 382
Query: 206 EECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTAL 265
+E LF M + +I+PN++T+ ++L+ + ++G+++H I +++ EL TA+
Sbjct: 383 DEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAV 442
Query: 266 LSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDM 325
+SMY K G A FE++P D V +N + Y G ++ ++ M GV PD
Sbjct: 443 ISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDS 502
Query: 326 FTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDL 385
T + + + G ++ +I++G D + V +ALI+M++ C+ L +A +FD
Sbjct: 503 RTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDK 562
Query: 386 IT-DKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHY 444
+K+ VSW+ M+ + +H Q EA++ F +MK+ + + + +NI+ A++ AL
Sbjct: 563 CGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRV 622
Query: 445 VRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAY 504
+H SL+ YAKCG IE + K F E S+K I++WN+M+SAY
Sbjct: 623 GMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIE--ISNKYIVSWNTMLSAY 680
Query: 505 SKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPS 564
+ HG L+ M+ + +KPD V+FL +L+AC ++GLV++GK IF+EM + + +
Sbjct: 681 AAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAE 740
Query: 565 QEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLI 624
EH+ACMVDLLG+AG EA +++ + + + V+G LL++ +MH + L+ A +L+
Sbjct: 741 VEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLV 800
Query: 625 NMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLE 672
+EP N +Y + G+ + V++ +KK P CSW+E
Sbjct: 801 KLEPLNPSHYSQDRRL----GEVNNVSR---------IKKVPACSWIE 835
Score = 216 bits (549), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 160/617 (25%), Positives = 297/617 (48%), Gaps = 14/617 (2%)
Query: 33 LLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVI 92
+L C + L Q+H + GL ++ +L++ Y+ F LS+ +F +P V+
Sbjct: 11 MLRECKNFRCLLQVHGSLIVSGLKPHN----QLINAYSLFQRQDLSRVIFDSVRDPGVVL 66
Query: 93 YSAILRNLSQFGEHEKTLFLYKEMVE-KSMYPDEESCSFVLRSCF-SVSHEQGKMVHAQI 150
+++++R ++ G H + L + M E K + PD+ S +F L++C S+ ++G +H I
Sbjct: 67 WNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLI 126
Query: 151 VKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECF 209
++G+++ + +LVE+Y K ++A + + M V ++ WN M+S ++G
Sbjct: 127 AEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAAL 186
Query: 210 QLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMY 269
LF MR + + +++ NL+ + L + + LH L+I ++ L+ MY
Sbjct: 187 LLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI--FAFSSGLIDMY 244
Query: 270 VKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAI 329
L A +FE++ R D W M++AYA NG +E LEL M VR + A
Sbjct: 245 CNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAA 304
Query: 330 PAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDK 389
A+ + + G +H + ++ G VSV +L+ MYS C L A ++F I D+
Sbjct: 305 SALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDR 364
Query: 390 TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLH 449
VVSWSAMI ++ Q EA+SLF +M + + + + ++L A + A + +H
Sbjct: 365 DVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIH 424
Query: 450 GYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGE 509
Y T++++ YAKCG A K F+ + KD +A+N++ Y++ G+
Sbjct: 425 CYAIKADIESELETATAVISMYAKCGRFSPALKAFE--RLPIKDAVAFNALAQGYTQIGD 482
Query: 510 WFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHA 569
+ F++Y MKL V PD T +G+L C +G ++ +++ +G+
Sbjct: 483 ANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIK-HGFDSECHVAH 541
Query: 570 CMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPK 629
++++ + + A + + + +++ +H A VA + + +E K
Sbjct: 542 ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEA-VATFRQMKVE-K 599
Query: 630 NAGNYVLLSNIYAAAGK 646
N V NI AA +
Sbjct: 600 FQPNAVTFVNIVRAAAE 616
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 183/415 (44%), Gaps = 46/415 (11%)
Query: 246 LHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGC 305
+H +IVS L + L++ Y +R++F+ + +V+WN M+ Y G
Sbjct: 24 VHGSLIVSGL----KPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGL 79
Query: 306 PKESLELV-YCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHN 364
+E+L Y G+ PD ++ A+ + + G ++H + G + V +
Sbjct: 80 HREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGT 139
Query: 365 ALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRV 424
AL++MY L SAR++FD + K VV+W+ M+ A + AL LF +M+ C +
Sbjct: 140 ALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDI 199
Query: 425 DFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLF 484
D + + N++P +K+ R LHG + L+ Y C + A +F
Sbjct: 200 DHVSLYNLIPAVSKLEKSDVCRCLHG--LVIKKGFIFAFSSGLIDMYCNCADLYAAESVF 257
Query: 485 DEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGL 544
+E KD +W +M++AY+ +G + + EL++ M+ +V+ ++V L A G
Sbjct: 258 EE--VWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGD 315
Query: 545 VDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLL 604
+ KG + ++ Y Q G G + A+ ++
Sbjct: 316 LVKG-------IAIHDYAVQQ----------GLIGDVSVATSLM---------------- 342
Query: 605 SACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDK-VAKMRSFLR 658
M+S E+A Q IN+E ++ ++ + Y AG+ D+ ++ R +R
Sbjct: 343 ---SMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMR 394
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 173/612 (28%), Positives = 282/612 (46%), Gaps = 73/612 (11%)
Query: 160 LVR--NSLVELYEKNGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRK 217
LVR + + L + +A + +GM + WN M++ G +E LF+++R
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 218 ENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKD 277
+ +P+ + +L + L +K G+ + SL+I S C L VN +L+ MY K
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 278 ARLMFE---------------------------------KMPRNDLVVWNIMVSAYAGNG 304
A +F +MP+ WNIM+S +A G
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 305 CPKESLELVYCMVRSGVRPDMFTAIPAISSIT-QLKHTEWGKQMHAHVIRNGSDYQVSVH 363
+ L L M+ S +PD +T +++ + + +G+ +HA +++NG V
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAK 243
Query: 364 NALIDMYSACNGLNSARR-------------------------------IFDLITDKTVV 392
N+++ Y+ + A R +F L +K +V
Sbjct: 244 NSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIV 303
Query: 393 SWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYX 452
+W+ MI + + +AL F+EM G D +L + + L + + +HG
Sbjct: 304 TWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL 363
Query: 453 XXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQ 512
+L+ YAKCG I+ A + F G ++KD+++WN+M+ A+ HG Q
Sbjct: 364 IHCGFQGYAYVGNALVNLYAKCGDIKEADRAF--GDIANKDLVSWNTMLFAFGVHGLADQ 421
Query: 513 CFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMV 572
+LY+ M S +KPD VTF+GLLT C +SGLV++G IF+ MV Y +H CM+
Sbjct: 422 ALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMI 481
Query: 573 DLLGRAGQIDEASKIIET----VPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEP 628
D+ GR G + EA + T V +S+ + LL AC H L ++ L EP
Sbjct: 482 DMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEP 541
Query: 629 KNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHP 688
++VLLSN+Y + G+W + +R + +RG+KKTPGCSW+E QV F V D SHP
Sbjct: 542 SEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHP 601
Query: 689 RSVDIYSILKVM 700
R ++ L +
Sbjct: 602 RLEELSETLNCL 613
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 130/575 (22%), Positives = 250/575 (43%), Gaps = 87/575 (15%)
Query: 61 LSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKS 120
L+SK+ K G +++VF D+V ++ +L + S+ G H++ + L+ ++
Sbjct: 7 LTSKIAS-LAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSD 65
Query: 121 MYPDEESCSFVLRSCFSVSHEQ-GKMVHAQIVKLGMDAFDLVRNSLVELYEKN------- 172
PD+ S + +L +C S+ + + G+ + + +++ G A V NSL+++Y K
Sbjct: 66 AKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSAN 125
Query: 173 ---------------------GFLNAHEPLEGMSV-----TELAY-WNNMISQAFESGKM 205
++NA + + V +A+ WN MIS GK+
Sbjct: 126 KVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKL 185
Query: 206 EECFQLFSRMRKENIQPNSITVINLLRS-TVDLHLLKIGQALHSLIIVSNLCGELTVNTA 264
E C LF M + +P+ T +L+ + + D + G+ +H++++ + + +
Sbjct: 186 ESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNS 245
Query: 265 LLSMYVKLGSLKDARLMFEKM-------------------------------PRNDLVVW 293
+LS Y KLGS DA E + P ++V W
Sbjct: 246 VLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTW 305
Query: 294 NIMVSAYAGNGCPKESLELVYCMVRSGVRPDMF---TAIPAISSITQLKHTEWGKQMHAH 350
M++ Y NG +++L M++SGV D F + A S + L H GK +H
Sbjct: 306 TTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGH---GKMIHGC 362
Query: 351 VIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEA 410
+I G V NAL+++Y+ C + A R F I +K +VSW+ M+ A VH +A
Sbjct: 363 LIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQA 422
Query: 411 LSLFIEMKLCGTRVDFIIVINILPT-----FAKIGALHYVRYLHGYXXXXXXXXXXXXET 465
L L+ M G + D + I +L T + G + + + Y T
Sbjct: 423 LKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHV----T 478
Query: 466 SLLASYAKCGCIEMARKL---FDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKL 522
++ + + G + A+ L + + + +W +++ A S H E+ +K+
Sbjct: 479 CMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKI 538
Query: 523 SNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVD 557
+ ++++F+ L ++G +G+++ +EMV+
Sbjct: 539 AE-PSEEMSFVLLSNLYCSTGRWKEGEDVRREMVE 572
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 157/456 (34%), Positives = 250/456 (54%), Gaps = 4/456 (0%)
Query: 244 QALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGN 303
+ +H++++ + + ++ T LL V +G + AR +F++M + + +WN + Y N
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 304 GCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVH 363
P ESL L M GVRPD FT + +I+QL G +HAHV++ G V
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 364 NALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTR 423
L+ MY L+SA +F+ + K +V+W+A + AL F +M +
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 424 VDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKL 483
D V+++L ++G+L ++ E + L + KCG E AR L
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 484 FDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSG 543
F+E K +++++W++MI Y+ +G+ + L+ M+ ++P+ VTFLG+L+AC ++G
Sbjct: 268 FEEMK--QRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAG 325
Query: 544 LVDKGKEIFKEMV--DLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYG 601
LV++GK F MV + +P +EH+ACMVDLLGR+G ++EA + I+ +P+ D ++G
Sbjct: 326 LVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWG 385
Query: 602 PLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRG 661
LL AC +H D L + A L+ P +VLLSNIYAAAGKWD V K+RS +R G
Sbjct: 386 ALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLG 445
Query: 662 LKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
KK S +E G++H F D+SHP+S IY L
Sbjct: 446 TKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKL 481
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 188/373 (50%), Gaps = 6/373 (1%)
Query: 38 TKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAIL 97
+KP+ L++IHA G + +SL ++L++ G +++VF P +++ +
Sbjct: 22 SKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLF 81
Query: 98 RNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMD 156
+ + ++L LYK+M + + PDE + FV+++ + G +HA +VK G
Sbjct: 82 KGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFG 141
Query: 157 AFDLVRNSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFESGKMEECFQLFSRM 215
+V LV +Y K G L++ E L E M V +L WN ++ ++G + F++M
Sbjct: 142 CLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM 201
Query: 216 RKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSL 275
+ +Q +S TV+++L + L L+IG+ ++ + + V A L M++K G+
Sbjct: 202 CADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNT 261
Query: 276 KDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSI 335
+ AR++FE+M + ++V W+ M+ YA NG +E+L L M G+RP+ T + +S+
Sbjct: 262 EAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSAC 321
Query: 336 TQLKHTEWGKQMHAHVIRNGS---DYQVSVHNALIDMYSACNGLNSARR-IFDLITDKTV 391
+ GK+ + ++++ + + + ++D+ L A I + +
Sbjct: 322 SHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDT 381
Query: 392 VSWSAMIKAHAVH 404
W A++ A AVH
Sbjct: 382 GIWGALLGACAVH 394
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 271 bits (694), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 151/468 (32%), Positives = 255/468 (54%), Gaps = 12/468 (2%)
Query: 237 LHLLKIGQALHSLIIVSNLC---GELTVNTALLSMYVKLGS----LKDARLMFEKMPRND 289
LH ++LH I + +L L N LLS + L S L AR +F+ + +
Sbjct: 138 LHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSS 197
Query: 290 LV---VWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQ 346
L+ VW M Y+ NG P+++L + M+ S + P F+ A+ + LK G+
Sbjct: 198 LLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRG 257
Query: 347 MHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQ 406
+HA +++ V+N L+ +Y + AR++FD ++++ VV+W+++I + +
Sbjct: 258 IHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVR 317
Query: 407 CLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETS 466
E +LF +M+ + + ILP +++ AL + +H S
Sbjct: 318 VHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNS 377
Query: 467 LLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVK 526
L+ Y KCG +E +R++FD + KD+ +WN M++ Y+ +G + L+ M S V
Sbjct: 378 LMDMYGKCGEVEYSRRVFDVMLT--KDLASWNIMLNCYAINGNIEEVINLFEWMIESGVA 435
Query: 527 PDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASK 586
PD +TF+ LL+ C ++GL + G +F+ M + P+ EH+AC+VD+LGRAG+I EA K
Sbjct: 436 PDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVK 495
Query: 587 IIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGK 646
+IET+P A ++G LL++C++H + + E+AA++L +EP N GNYV++SNIYA A
Sbjct: 496 VIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKM 555
Query: 647 WDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIY 694
WD V K+R ++ RG+KK GCSW++ ++ F R+ D Y
Sbjct: 556 WDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEY 603
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 183/360 (50%), Gaps = 13/360 (3%)
Query: 55 LHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSV---IYSAILRNLSQFGEHEKTLF 111
L N L SKL+ ++ L++K+F + + +++A+ S+ G L
Sbjct: 163 LRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALI 222
Query: 112 LYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQIVKLGMDAFDLVRNSLVELYE 170
+Y +M+ + P S S L++C + + G+ +HAQIVK +V N L++LY
Sbjct: 223 VYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYM 282
Query: 171 KNG-FLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVIN 229
++G F +A + +GMS + WN++IS + ++ E F LF +M++E I + T+
Sbjct: 283 ESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTT 342
Query: 230 LLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRND 289
+L + + L G+ +H+ I+ S ++ + +L+ MY K G ++ +R +F+ M D
Sbjct: 343 ILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKD 402
Query: 290 LVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHA 349
L WNIM++ YA NG +E + L M+ SGV PD T + +S + TE+G +
Sbjct: 403 LASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFE 462
Query: 350 HVIRNGSDYQVSV----HNALIDMYSACNGLNSARRIFDLITDKTVVS-WSAMIKAHAVH 404
R ++++VS + L+D+ + A ++ + + K S W +++ + +H
Sbjct: 463 ---RMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLH 519
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 123/265 (46%), Gaps = 6/265 (2%)
Query: 28 FTTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
F+ S L C + L+ IHA+ + + + L+ Y + GL ++KVF
Sbjct: 237 FSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDG 296
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQG 143
+ V +++++ LS+ + L+++M E+ + + + +L +C V+ G
Sbjct: 297 MSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTG 356
Query: 144 KMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFES 202
K +HAQI+K + NSL+++Y K G + + + M +LA WN M++ +
Sbjct: 357 KEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAIN 416
Query: 203 GKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVS-NLCGELTV 261
G +EE LF M + + P+ IT + LL D L + G +L + + L
Sbjct: 417 GNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEH 476
Query: 262 NTALLSMYVKLGSLKDARLMFEKMP 286
L+ + + G +K+A + E MP
Sbjct: 477 YACLVDILGRAGKIKEAVKVIETMP 501
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/573 (27%), Positives = 286/573 (49%), Gaps = 69/573 (12%)
Query: 163 NSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQ 221
N +V + K G L+ A M ++ N+++ +G EE +LF + N
Sbjct: 128 NVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFS 184
Query: 222 PNSITVINLLRSTVDLHLLKIGQALHSLIIVSNL----------------CGELTVNT-- 263
++IT+ +L++ +L LK G+ +H+ I++ + CG+L + +
Sbjct: 185 ADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYM 244
Query: 264 -------------ALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESL 310
AL+S Y G + ++R +F++ +++WN M+S Y N E+L
Sbjct: 245 LEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEAL 304
Query: 311 ELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMY 370
+++ +R+ R D T I++ L E GKQMH H + G + V + L+DMY
Sbjct: 305 -VLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMY 363
Query: 371 S-------------------------------ACNGLNSARRIFDLITDKTVVSWSAMIK 399
S +C ++ A+R+F+ I +K+++SW++M
Sbjct: 364 SKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTN 423
Query: 400 AHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXX 459
+ + +E L F +M D + + +++ A I +L +
Sbjct: 424 GFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDS 483
Query: 460 XXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQ 519
+SL+ Y KCG +E R++FD S D + WNSMIS Y+ +G+ F+ +L+ +
Sbjct: 484 DQVVSSSLIDLYCKCGFVEHGRRVFDTMVKS--DEVPWNSMISGYATNGQGFEAIDLFKK 541
Query: 520 MKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAG 579
M ++ ++P Q+TF+ +LTAC GLV++G+++F+ M +G+ P +EH +CMVDLL RAG
Sbjct: 542 MSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAG 601
Query: 580 QIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSN 639
++EA ++E +P + D ++ +L C + + + AA+K+I +EP+N+ YV LS
Sbjct: 602 YVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSA 661
Query: 640 IYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLE 672
I+A +G W+ A +R +R+ + K PG SW +
Sbjct: 662 IFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 115/534 (21%), Positives = 220/534 (41%), Gaps = 113/534 (21%)
Query: 131 VLRSCFSVSHEQ-GKMVHAQIVKLG-MDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVT 187
+L+SC S + E + + ++K G + + +V N L+++Y ++G + A + M
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 188 ELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALH 247
WN MI SG+ + F M + + ++ V
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVV-------------------- 131
Query: 248 SLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPK 307
S + K G L AR +F MP D+V N ++ Y NG +
Sbjct: 132 -------------------SGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAE 172
Query: 308 ESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALI 367
E+L L + S D T + + +L+ + GKQ+HA ++ G + ++++L+
Sbjct: 173 EALRLFKELNFSA---DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLV 229
Query: 368 DMYSACNGL-------------------------------NSARRIFDLITDKTVVSWSA 396
++Y+ C L N +R +FD +++ V+ W++
Sbjct: 230 NVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNS 289
Query: 397 MIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXX 456
MI + ++ +EAL LF EM+ TR D + ++ +G L + +H +
Sbjct: 290 MISGYIANNMKMEALVLFNEMR-NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFG 348
Query: 457 XXXXXXXETSLLASYAKCGCIEMARKLFDEGKS--------------------------- 489
++LL Y+KCG A KLF E +S
Sbjct: 349 LIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFE 408
Query: 490 --SHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDK 547
+K +I+WNSM + +S++G + E ++QM ++ D+V+ +++AC + ++
Sbjct: 409 RIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLEL 468
Query: 548 GKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIET------VPLNS 595
G+++F + G Q + ++DL + G ++ ++ +T VP NS
Sbjct: 469 GEQVFARAT-IVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNS 521
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 169/392 (43%), Gaps = 68/392 (17%)
Query: 23 FQTRFFTTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQ 79
F T +++L C + + L+ QIHA+ + G+ +S ++S L++ Y K G ++
Sbjct: 183 FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMAS 242
Query: 80 KVFYFTENPDSVIYSAILRNLSQFGEHEKT------------------------------ 109
+ PD SA++ + G ++
Sbjct: 243 YMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKME 302
Query: 110 -LFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDLVRNSLVE 167
L L+ EM ++ D + + V+ +C + E GK +H K G+ +V ++L++
Sbjct: 303 ALVLFNEMRNETR-EDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLD 361
Query: 168 LYEKNG------------------FLN--------------AHEPLEGMSVTELAYWNNM 195
+Y K G LN A E + L WN+M
Sbjct: 362 MYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSM 421
Query: 196 ISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNL 255
+ ++G E + F +M K ++ + +++ +++ + + L++G+ + + + L
Sbjct: 422 TNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGL 481
Query: 256 CGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYC 315
+ V+++L+ +Y K G ++ R +F+ M ++D V WN M+S YA NG E+++L
Sbjct: 482 DSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKK 541
Query: 316 MVRSGVRPDMFTAIPAISSITQLKHTEWGKQM 347
M +G+RP T + +++ E G+++
Sbjct: 542 MSVAGIRPTQITFMVVLTACNYCGLVEEGRKL 573
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 149/314 (47%), Gaps = 38/314 (12%)
Query: 29 TTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFT 85
T +++++ C L+ Q+H GL + ++S L+D Y+K G P + K+F
Sbjct: 320 TLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEV 379
Query: 86 ENPDSVIYSAILR-------------------------------NLSQFGEHEKTLFLYK 114
E+ D+++ +++++ SQ G +TL +
Sbjct: 380 ESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFH 439
Query: 115 EMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNG 173
+M + + DE S S V+ +C S+S E G+ V A+ +G+D+ +V +SL++LY K G
Sbjct: 440 QMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCG 499
Query: 174 FL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLR 232
F+ + + M ++ WN+MIS +G+ E LF +M I+P IT + +L
Sbjct: 500 FVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLT 559
Query: 233 STVDLHLLKIGQAL-HSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRN-DL 290
+ L++ G+ L S+ + + + ++ + + G +++A + E+MP + D
Sbjct: 560 ACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDG 619
Query: 291 VVWNIMVSAYAGNG 304
+W+ ++ NG
Sbjct: 620 SMWSSILRGCVANG 633
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/446 (34%), Positives = 245/446 (54%), Gaps = 41/446 (9%)
Query: 292 VWNIMVSAYAGN-GCPKESLEL-VYCMVRS-GVRPDMFTAIPAISSITQLKHTEWGKQMH 348
+WNI++ A N P+ + VY +R+ V PD T + S H G++ H
Sbjct: 26 LWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 349 AHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFD---------------------LIT 387
A ++ G D V +L++MYS+C L SA+R+FD LI
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLID 145
Query: 388 D----------KTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFI-----IVINI 432
D + V+SWS +I + + + EAL LF EM+L F+ + +
Sbjct: 146 DARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 433 LPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHK 492
L ++GAL +++H Y T+L+ YAKCG +E A+++F+ S K
Sbjct: 206 LSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFN-ALGSKK 264
Query: 493 DIIAWNSMISAYSKHGEWFQCFELYNQMKLS-NVKPDQVTFLGLLTACVNSGLVDKGKEI 551
D+ A+++MI + +G +CF+L+++M S N+ P+ VTF+G+L ACV+ GL+++GK
Sbjct: 265 DVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSY 324
Query: 552 FKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHS 611
FK M++ +G PS +H+ CMVDL GR+G I EA I ++P+ D ++G LLS +M
Sbjct: 325 FKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
Query: 612 DPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWL 671
D + E A ++LI ++P N+G YVLLSN+YA G+W +V +R + +G+ K PGCS++
Sbjct: 385 DIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYV 444
Query: 672 ESNGQVHEFRVADQSHPRSVDIYSIL 697
E G VHEF V D+S S IY++L
Sbjct: 445 EVEGVVHEFVVGDESQQESERIYAML 470
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 154/364 (42%), Gaps = 43/364 (11%)
Query: 192 WNNMIS---QAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHS 248
WN +I S + ++ RMR + P+ T LL S + L +GQ H+
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 249 LIIVSNLCGELTVNTALLSMYVKLGSLK-------------------------------D 277
I++ L + V T+LL+MY G L+ D
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 278 ARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMV-----RSGVRPDMFTAIPAI 332
AR +F++MP +++ W+ +++ Y G KE+L+L M + VRP+ FT +
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 333 SSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFD-LITDKTV 391
S+ +L E GK +HA++ + + + + ALIDMY+ C L A+R+F+ L + K V
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 392 VSWSAMIKAHAVHDQCLEALSLFIEMKLC-GTRVDFIIVINILPTFAKIGALHYVR-YLH 449
++SAMI A++ E LF EM + + + IL G ++ + Y
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFK 326
Query: 450 GYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGE 509
++ Y + G I+ A F D++ W S++S G+
Sbjct: 327 MMIEEFGITPSIQHYGCMVDLYGRSGLIKEAES-FIASMPMEPDVLIWGSLLSGSRMLGD 385
Query: 510 WFQC 513
C
Sbjct: 386 IKTC 389
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 146/318 (45%), Gaps = 45/318 (14%)
Query: 27 FFTTSSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVF- 82
F T LL P HL Q+ HA+ L GL ++ + + L++ Y+ G +Q+VF
Sbjct: 62 FHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFD 121
Query: 83 ----------------------------YFTENPDS--VIYSAILRNLSQFGEHEKTLFL 112
F E P+ + +S ++ G++++ L L
Sbjct: 122 DSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDL 181
Query: 113 YKEMV-----EKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDLVRNSLV 166
++EM E + P+E + S VL +C + EQGK VHA I K ++ ++ +L+
Sbjct: 182 FREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALI 241
Query: 167 ELYEKNGFL-NAHEPLEGM-SVTELAYWNNMISQAFESGKMEECFQLFSRM-RKENIQPN 223
++Y K G L A + S ++ ++ MI G +ECFQLFS M +NI PN
Sbjct: 242 DMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPN 301
Query: 224 SITVINLLRSTVDLHLLKIGQALHSLIIVS-NLCGELTVNTALLSMYVKLGSLKDARLMF 282
S+T + +L + V L+ G++ ++I + + ++ +Y + G +K+A
Sbjct: 302 SVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFI 361
Query: 283 EKMP-RNDLVVWNIMVSA 299
MP D+++W ++S
Sbjct: 362 ASMPMEPDVLIWGSLLSG 379
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 156/373 (41%), Gaps = 46/373 (12%)
Query: 90 SVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHA 148
++I AI+ N+S H + +Y M + PD + F+L S + H G+ HA
Sbjct: 28 NIIIRAIVHNVSSPQRHS-PISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 149 QIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEE 207
QI+ G+D VR SL+ +Y G L +A + +L WN++++ ++G +++
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 208 CFQLFSRMRKEN------------------------------------IQPNSITVINLL 231
+LF M + N ++PN T+ +L
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 232 RSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKM-PRNDL 290
+ L L+ G+ +H+ I ++ ++ + TAL+ MY K GSL+ A+ +F + + D+
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 291 VVWNIMVSAYAGNGCPKESLELVYCMVRS-GVRPDMFTAIPAISSITQLKHTEWGKQMHA 349
++ M+ A G E +L M S + P+ T + + + GK
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFK 326
Query: 350 HVIRN-GSDYQVSVHNALIDMYSACNGLNSARR-IFDLITDKTVVSWSAMIKAHAVHDQ- 406
+I G + + ++D+Y + A I + + V+ W +++ +
Sbjct: 327 MMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDI 386
Query: 407 --CLEALSLFIEM 417
C AL IE+
Sbjct: 387 KTCEGALKRLIEL 399
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 258/475 (54%), Gaps = 3/475 (0%)
Query: 223 NSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMF 282
N + +LL S+ G LH ++ S L V L++ Y K D+R F
Sbjct: 14 NYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF 73
Query: 283 EKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTE 342
E P+ W+ ++S +A N P SLE + M+ +RPD A S L +
Sbjct: 74 EDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCD 133
Query: 343 WGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHA 402
G+ +H ++ G D V V ++L+DMY+ C + AR++FD + + VV+WS M+ +A
Sbjct: 134 IGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYA 193
Query: 403 VHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXX 462
+ EAL LF E V+ +++ A L R +HG
Sbjct: 194 QMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSF 253
Query: 463 XETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKL 522
+SL++ Y+KCG E A ++F+E K++ WN+M+ AY++H + EL+ +MKL
Sbjct: 254 VGSSLVSLYSKCGVPEGAYQVFNE--VPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKL 311
Query: 523 SNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQID 582
S +KP+ +TFL +L AC ++GLVD+G+ F +M + +P+ +H+A +VD+LGRAG++
Sbjct: 312 SGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQ 370
Query: 583 EASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYA 642
EA ++I +P++ V+G LL++C +H + LA AA K+ + P ++G ++ LSN YA
Sbjct: 371 EALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYA 430
Query: 643 AAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
A G+++ AK R LRDRG KK G SW+E +VH F ++ H +S +IY L
Sbjct: 431 ADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKL 485
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 158/330 (47%), Gaps = 19/330 (5%)
Query: 128 CSFVLRSCFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVT 187
C +L S + S +G +H +VK G+ LV N+L+ Y K+ P + +
Sbjct: 19 CDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQL-----PFD----S 69
Query: 188 ELAYWNNMISQAFESGKMEECF----------QLFSRMRKENIQPNSITVINLLRSTVDL 237
A+ ++ + + CF + +M N++P+ + + +S L
Sbjct: 70 RRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAIL 129
Query: 238 HLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMV 297
IG+++H L + + ++ V ++L+ MY K G + AR MF++MP+ ++V W+ M+
Sbjct: 130 SRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMM 189
Query: 298 SAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSD 357
YA G +E+L L + + + ++ IS E G+Q+H I++ D
Sbjct: 190 YGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFD 249
Query: 358 YQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEM 417
V ++L+ +YS C A ++F+ + K + W+AM+KA+A H + + LF M
Sbjct: 250 SSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRM 309
Query: 418 KLCGTRVDFIIVINILPTFAKIGALHYVRY 447
KL G + +FI +N+L + G + RY
Sbjct: 310 KLSGMKPNFITFLNVLNACSHAGLVDEGRY 339
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 175/366 (47%), Gaps = 9/366 (2%)
Query: 45 QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFG 104
Q+H GL +++ L++ Y+K LP S++ F E+ + +S F
Sbjct: 36 QLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF---EDSPQKSSTTWSSIISCFA 92
Query: 105 EHE---KTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDL 160
++E +L K+M+ ++ PD+ +SC +S + G+ VH +K G DA
Sbjct: 93 QNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVF 152
Query: 161 VRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKEN 219
V +SLV++Y K G + A + + M + W+ M+ + G+ EE LF EN
Sbjct: 153 VGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFEN 212
Query: 220 IQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDAR 279
+ N + +++ + LL++G+ +H L I S+ V ++L+S+Y K G + A
Sbjct: 213 LAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAY 272
Query: 280 LMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLK 339
+F ++P +L +WN M+ AYA + ++ +EL M SG++P+ T + +++ +
Sbjct: 273 QVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAG 332
Query: 340 HTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIF-DLITDKTVVSWSAMI 398
+ G+ + + + + +L+DM L A + ++ D T W A++
Sbjct: 333 LVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALL 392
Query: 399 KAHAVH 404
+ VH
Sbjct: 393 TSCTVH 398
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 124/259 (47%), Gaps = 3/259 (1%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQF 103
+ +H G + + S L+D Y K G ++K+F + V +S ++ +Q
Sbjct: 136 RSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQM 195
Query: 104 GEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCF-SVSHEQGKMVHAQIVKLGMDAFDLVR 162
GE+E+ L+L+KE + +++ ++ S S V+ C S E G+ +H +K D+ V
Sbjct: 196 GENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVG 255
Query: 163 NSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQ 221
+SLV LY K G A++ + V L WN M+ + ++ +LF RM+ ++
Sbjct: 256 SSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMK 315
Query: 222 PNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLM 281
PN IT +N+L + L+ G+ + S + +L+ M + G L++A +
Sbjct: 316 PNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEV 375
Query: 282 FEKMPRNDL-VVWNIMVSA 299
MP + VW ++++
Sbjct: 376 ITNMPIDPTESVWGALLTS 394
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 268 bits (686), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 154/467 (32%), Positives = 245/467 (52%), Gaps = 34/467 (7%)
Query: 265 LLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPD 324
LL + + +L AR +F+ + ++N ++ AY + P ES+ L + G+RP
Sbjct: 22 LLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPS 81
Query: 325 MFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFD 384
T ++ + +H+ R+G + LI Y+ L ARR+FD
Sbjct: 82 HHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFD 141
Query: 385 LITDKTVVSWSAMIKAHAVHDQCLEALSLF---------------------------IEM 417
++ + V W+AMI + A+ LF ++M
Sbjct: 142 EMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKM 201
Query: 418 KLC-----GTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYA 472
LC + + I V+++LP A +G L R L GY + + Y+
Sbjct: 202 FLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYS 261
Query: 473 KCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTF 532
KCG I++A++LF+E + +++ +WNSMI + + HG+ + L+ QM KPD VTF
Sbjct: 262 KCGMIDVAKRLFEE-LGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTF 320
Query: 533 LGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVP 592
+GLL ACV+ G+V KG+E+FK M +++ P EH+ CM+DLLGR G++ EA +I+T+P
Sbjct: 321 VGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMP 380
Query: 593 LNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAK 652
+ DA V+G LL AC H + +AE+A++ L +EP N GN V++SNIYAA KWD V +
Sbjct: 381 MKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLR 440
Query: 653 MRSFLRDRGLKKTPGCSW-LESNGQVHEFRVADQSHPRSVDIYSILK 698
MR ++ + K G S+ +E VH+F V D+SHPRS +IY +L+
Sbjct: 441 MRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLE 487
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 138/294 (46%), Gaps = 43/294 (14%)
Query: 258 ELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMV 317
++ V A+++ Y + G +K A +F+ MPR ++ W ++S ++ NG E+L++ CM
Sbjct: 147 DVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCME 206
Query: 318 RS-GVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGL 376
+ V+P+ T + + + L E G+++ + NG + V NA I+MYS C +
Sbjct: 207 KDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMI 266
Query: 377 NSARRIF-DLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPT 435
+ A+R+F +L + + SW++MI + A H + EAL+LF +M G + D + + +L
Sbjct: 267 DVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLL-- 324
Query: 436 FAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHK--- 492
+ +HG G + ++LF + HK
Sbjct: 325 ---------LACVHG------------------------GMVVKGQELFKSMEEVHKISP 351
Query: 493 DIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVD 546
+ + MI + G+ + ++L M + KPD V + LL AC G V+
Sbjct: 352 KLEHYGCMIDLLGRVGKLQEAYDLIKTMPM---KPDAVVWGTLLGACSFHGNVE 402
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 175/408 (42%), Gaps = 59/408 (14%)
Query: 43 LQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGL--SQKVFYFTENPDSVIYSAILRNL 100
++Q+HA G+ + L +L+ +P L ++K+F +N + +Y+ +++
Sbjct: 4 IKQLHAHCLRTGVDETKDLLQRLLL------IPNLVYARKLFDHHQNSCTFLYNKLIQAY 57
Query: 101 SQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQG-KMVHAQIVKLGMDAFD 159
+ +++ LY + + P + +F+ + S S + +++H+Q + G ++
Sbjct: 58 YVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDS 117
Query: 160 LVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKE 218
+L+ Y K G L A + MS ++ WN MI+ G M+ +LF M ++
Sbjct: 118 FCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRK 177
Query: 219 N--------------------------------IQPNSITVINLLRSTVDLHLLKIGQAL 246
N ++PN ITV+++L + +L L+IG+ L
Sbjct: 178 NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRL 237
Query: 247 HSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMP-RNDLVVWNIMVSAYAGNGC 305
+ + V A + MY K G + A+ +FE++ + +L WN M+ + A +G
Sbjct: 238 EGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGK 297
Query: 306 PKESLELVYCMVRSGVRPDMFTAIPAISSITQ----LKHTEWGKQM-HAHVIRNGSDYQV 360
E+L L M+R G +PD T + + + +K E K M H I ++
Sbjct: 298 HDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEH-- 355
Query: 361 SVHNALIDMYSACNGLNSARRIFDLIT----DKTVVSWSAMIKAHAVH 404
+ +ID+ L A +DLI V W ++ A + H
Sbjct: 356 --YGCMIDLLGRVGKLQEA---YDLIKTMPMKPDAVVWGTLLGACSFH 398
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 136/332 (40%), Gaps = 52/332 (15%)
Query: 345 KQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVH 404
KQ+HAH +R G D + L+ + + L AR++FD + ++ +I+A+ VH
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLIPN----LVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 405 DQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXE 464
Q E++ L+ + G R I A + +R LH
Sbjct: 61 HQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCC 120
Query: 465 TSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSN 524
T+L+ +YAK G + AR++FDE S +D+ WN+MI+ Y + G+ EL++ M N
Sbjct: 121 TTLITAYAKLGALCCARRVFDE--MSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKN 178
Query: 525 --------------------------------VKPDQVTFLGLLTACVNSGLVDKGKEIF 552
VKP+ +T + +L AC N G ++ G+
Sbjct: 179 VTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRR-- 236
Query: 553 KEMVDLYGYQPSQEH----HAC--MVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSA 606
L GY + C +++ + G ID A ++ E + + + ++ +
Sbjct: 237 -----LEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGS 291
Query: 607 CKMHSDPRLA-EVAAQKLINMEPKNAGNYVLL 637
H A + AQ L E +A +V L
Sbjct: 292 LATHGKHDEALTLFAQMLREGEKPDAVTFVGL 323
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 135/299 (45%), Gaps = 37/299 (12%)
Query: 43 LQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQ 102
L+ +H++FF G +S + L+ Y K G +++VF D +++A++ +
Sbjct: 101 LRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQR 160
Query: 103 FGEHEKTLFLYKEMV--------------------------------EKSMYPDEESCSF 130
G+ + + L+ M +KS+ P+ +
Sbjct: 161 RGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVS 220
Query: 131 VLRSCFSVSH-EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL--EGMSVT 187
VL +C ++ E G+ + + G V N+ +E+Y K G ++ + L E +
Sbjct: 221 VLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQR 280
Query: 188 ELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQAL- 246
L WN+MI GK +E LF++M +E +P+++T + LL + V ++ GQ L
Sbjct: 281 NLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELF 340
Query: 247 HSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMP-RNDLVVWNIMVSAYAGNG 304
S+ V + +L ++ + ++G L++A + + MP + D VVW ++ A + +G
Sbjct: 341 KSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHG 399
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 182/691 (26%), Positives = 332/691 (48%), Gaps = 79/691 (11%)
Query: 46 IHARFFLHGL-HQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFG 104
IH GL + ++ + S M Y + G + K+F D + ++ I+ + G
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG 68
Query: 105 EHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSV-SHEQGKMVHAQIVKLGMDAFDLVRN 163
EK + L++EM + + +L+ C + +G+ +H +++LG+++ + N
Sbjct: 69 NWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCN 128
Query: 164 SLVELYEKNGFLN-AHEPLEGM-------------SVTELAY------------------ 191
SL+ +Y +NG L + + M S T+L Y
Sbjct: 129 SLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKP 188
Query: 192 ----WNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALH 247
WN+++S G ++ + RM+ ++P++ ++ +LL++ + LK+G+A+H
Sbjct: 189 DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIH 248
Query: 248 SLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPK 307
I+ + L ++ V T L+ MY+K G L AR++F+ M ++V WN +VS + K
Sbjct: 249 GYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLK 308
Query: 308 ESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALI 367
++ L+ M + G++PD T W N+L
Sbjct: 309 DAEALMIRMEKEGIKPDAIT---------------W--------------------NSLA 333
Query: 368 DMYSACNGLNSARRIFDLITDK----TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTR 423
Y+ A + + +K VVSW+A+ + + AL +FI+M+ G
Sbjct: 334 SGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVG 393
Query: 424 VDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKL 483
+ + +L + LH + +HG+ T+L+ Y K G ++ A ++
Sbjct: 394 PNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEI 453
Query: 484 FDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSG 543
F K +K + +WN M+ Y+ G + ++ M + ++PD +TF +L+ C NSG
Sbjct: 454 FWGIK--NKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSG 511
Query: 544 LVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPL 603
LV +G + F M YG P+ EH +CMVDLLGR+G +DEA I+T+ L DA ++G
Sbjct: 512 LVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAF 571
Query: 604 LSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLK 663
LS+CK+H D LAE+A ++L +EP N+ NY+++ N+Y+ +W+ V ++R+ +R+ ++
Sbjct: 572 LSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVR 631
Query: 664 KTPGCSWLESNGQVHEFRVADQSHPRSVDIY 694
SW++ + VH F ++HP DIY
Sbjct: 632 VQDLWSWIQIDQTVHIFYAEGKTHPDEGDIY 662
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 181/451 (40%), Gaps = 83/451 (18%)
Query: 29 TTSSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFT 85
T LL +C+ + +QIH GL N S+ + L+ Y++ G LS+KVF
Sbjct: 91 TMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSM 150
Query: 86 EN-----------------------------------PDSVIYSAILRNLSQFGEHEKTL 110
++ PD V ++++L + G + +
Sbjct: 151 KDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAI 210
Query: 111 FLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVK--LGMDAFDLVRNSLVE 167
+ K M + P S S +L++ H + GK +H I++ L D + V +L++
Sbjct: 211 AVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVY--VETTLID 268
Query: 168 LYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSIT 226
+Y K G+L A + M + WN+++S + +++ L RM KE I+P++IT
Sbjct: 269 MYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT 328
Query: 227 VINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMP 286
+L S Y LG + A + KM
Sbjct: 329 W-----------------------------------NSLASGYATLGKPEKALDVIGKMK 353
Query: 287 RN----DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTE 342
++V W + S + NG + +L++ M GV P+ T + + L
Sbjct: 354 EKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLH 413
Query: 343 WGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHA 402
GK++H +R V AL+DMY L SA IF I +K++ SW+ M+ +A
Sbjct: 414 SGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYA 473
Query: 403 VHDQCLEALSLFIEMKLCGTRVDFIIVINIL 433
+ + E ++ F M G D I ++L
Sbjct: 474 MFGRGEEGIAAFSVMLEAGMEPDAITFTSVL 504
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/471 (31%), Positives = 260/471 (55%), Gaps = 39/471 (8%)
Query: 261 VNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG 320
+N L Y G ++ + +F + DL ++ ++ + NG ++ L ++ S
Sbjct: 66 LNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSE 125
Query: 321 VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSAR 380
+ P+ FT SS+ + T+ GK +H HV++ G V L+D+Y+ + SA+
Sbjct: 126 INPNEFT----FSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQ 181
Query: 381 RIFDLITDKT-------------------------------VVSWSAMIKAHAVHDQCLE 409
++FD + +++ +VSW+ MI +A H +
Sbjct: 182 KVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPND 241
Query: 410 ALSLFIEMKLCGT-RVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLL 468
AL LF ++ G + D I V+ L ++IGAL R++H + T L+
Sbjct: 242 ALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLI 301
Query: 469 ASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMK-LSNVKP 527
Y+KCG +E A +F++ + KDI+AWN+MI+ Y+ HG L+N+M+ ++ ++P
Sbjct: 302 DMYSKCGSLEEAVLVFND--TPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQP 359
Query: 528 DQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKI 587
+TF+G L AC ++GLV++G IF+ M YG +P EH+ C+V LLGRAGQ+ A +
Sbjct: 360 TDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYET 419
Query: 588 IETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKW 647
I+ + +++D+ ++ +L +CK+H D L + A+ LI + KN+G YVLLSNIYA+ G +
Sbjct: 420 IKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDY 479
Query: 648 DKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILK 698
+ VAK+R+ ++++G+ K PG S +E +VHEFR D+ H +S +IY++L+
Sbjct: 480 EGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLR 530
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 172/376 (45%), Gaps = 31/376 (8%)
Query: 188 ELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRST-------VDLHLL 240
+L + I+ A +G ++ F L+ ++ I PN T +LL+S + H+L
Sbjct: 94 DLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVL 153
Query: 241 KIGQALH-----SLIIVSNLCGE---------------LTVNTALLSMYVKLGSLKDARL 280
K G + L+ V G+ L +TA+++ Y K G+++ AR
Sbjct: 154 KFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARA 213
Query: 281 MFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG-VRPDMFTAIPAISSITQLK 339
+F+ M D+V WN+M+ YA +G P ++L L ++ G +PD T + A+S+ +Q+
Sbjct: 214 LFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIG 273
Query: 340 HTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIK 399
E G+ +H V + V V LIDMYS C L A +F+ K +V+W+AMI
Sbjct: 274 ALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIA 333
Query: 400 AHAVHDQCLEALSLFIEMK-LCGTRVDFIIVINILPTFAKIGALHY-VRYLHGYXXXXXX 457
+A+H +AL LF EM+ + G + I I L A G ++ +R
Sbjct: 334 GYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGI 393
Query: 458 XXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELY 517
L++ + G ++ A + + + D + W+S++ + HG++ E+
Sbjct: 394 KPKIEHYGCLVSLLGRAGQLKRAYETI-KNMNMDADSVLWSSVLGSCKLHGDFVLGKEIA 452
Query: 518 NQMKLSNVKPDQVTFL 533
+ N+K + L
Sbjct: 453 EYLIGLNIKNSGIYVL 468
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 181/414 (43%), Gaps = 48/414 (11%)
Query: 33 LLDLCTKPQHLQQIHARFFLHGL---HQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPD 89
L+D + QIHA H L + L+ KL Y G S +F+ T +PD
Sbjct: 35 LIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPD 94
Query: 90 SVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMVHAQ 149
+++A + S G ++ LY +++ + P+E + S +L+SC S + GK++H
Sbjct: 95 LFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC---STKSGKLIHTH 151
Query: 150 IVKLGMDAFDLVRNSLVELYEKNGFL--------------------------------NA 177
++K G+ V LV++Y K G + A
Sbjct: 152 VLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAA 211
Query: 178 HEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKEN-IQPNSITVINLLRSTVD 236
+ M ++ WN MI + G + LF ++ E +P+ ITV+ L +
Sbjct: 212 RALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQ 271
Query: 237 LHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIM 296
+ L+ G+ +H + S + + V T L+ MY K GSL++A L+F PR D+V WN M
Sbjct: 272 IGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAM 331
Query: 297 VSAYAGNGCPKESLELVYCMVR-SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNG 355
++ YA +G +++L L M +G++P T I + + G ++ + G
Sbjct: 332 IAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESM---G 388
Query: 356 SDY----QVSVHNALIDMYSACNGLNSA-RRIFDLITDKTVVSWSAMIKAHAVH 404
+Y ++ + L+ + L A I ++ D V WS+++ + +H
Sbjct: 389 QEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLH 442
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 194/703 (27%), Positives = 333/703 (47%), Gaps = 53/703 (7%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQF 103
+ +HA F L + + L + L+ Y K G P + VF +P V Y+A++ S+
Sbjct: 100 KAVHASF-LKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRL 158
Query: 104 GEHEKTLFLYKEMVEKSMY-PDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDLV 161
+ L ++ M + + P+E + +L +C VS G +H IVK G V
Sbjct: 159 NLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFV 218
Query: 162 RNSLVELYEKNGFLNAHEPL---EGMSVTELAYWNNMISQAFESGKMEECFQLFSRM-RK 217
NSL+ LY+K+ + + L + + ++A WN ++S + GK + F LF M R
Sbjct: 219 SNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRV 278
Query: 218 ENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKD 277
E +S T+ LL S D +L G+ LH I L EL+VN AL+ Y K +K
Sbjct: 279 EGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKK 338
Query: 278 ARLMFEKMPRNDLVVWNIMVSAY----------------------------AG---NGCP 306
++E M D V + M++AY AG NG
Sbjct: 339 VESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHG 398
Query: 307 KESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNAL 366
++L+L M++ GV F+ A+ + + + +Q+H I+ G+ + + AL
Sbjct: 399 LKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTAL 458
Query: 367 IDMYSACNGLNSARRIFD-----LITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCG 421
+DM + C + A +FD L + K S +I +A + +A+SLF LC
Sbjct: 459 LDMCTRCERMADAEEMFDQWPSNLDSSKATTS---IIGGYARNGLPDKAVSLF-HRTLCE 514
Query: 422 TRV--DFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEM 479
++ D + + IL +G +H Y SL++ YAKC +
Sbjct: 515 QKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDD 574
Query: 480 ARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTAC 539
A K+F+ + D+I+WNS+IS Y + L+++M +KPD +T +++A
Sbjct: 575 AIKIFNTMR--EHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAF 632
Query: 540 --VNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDA 597
S + +++F M +Y +P+ EH+ V +LG G ++EA I ++P+ +
Sbjct: 633 RYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEV 692
Query: 598 RVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFL 657
V LL +C++HS+ +A+ A+ +++ +P+ Y+L SNIY+A+G W + +R +
Sbjct: 693 SVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEM 752
Query: 658 RDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILKVM 700
R+RG +K P SW+ ++H F D SHP+ DIY L+++
Sbjct: 753 RERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEIL 795
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 214/494 (43%), Gaps = 51/494 (10%)
Query: 141 EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEG------MSVTELAYWNN 194
E K VHA +KL + L N+L+ Y K GF P E +S + +
Sbjct: 97 EVTKAVHASFLKLREEKTRL-GNALISTYLKLGF-----PREAILVFVSLSSPTVVSYTA 150
Query: 195 MISQAFESGKME-ECFQLFSRMRKEN-IQPNSITVINLLRSTVDLHLLKIGQALHSLIIV 252
+IS F +E E ++F RMRK +QPN T + +L + V + +G +H LI+
Sbjct: 151 LIS-GFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVK 209
Query: 253 SNLCGELTVNTALLSMYVK--LGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESL 310
S + V+ +L+S+Y K S D +F+++P+ D+ WN +VS+ G ++
Sbjct: 210 SGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAF 269
Query: 311 ELVYCMVR-SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDM 369
+L Y M R G D FT +SS T G+++H IR G ++SV+NALI
Sbjct: 270 DLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGF 329
Query: 370 YS-------------------------------ACNGLNSARRIFDLITDKTVVSWSAMI 398
YS + ++SA IF +T+K ++++A++
Sbjct: 330 YSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALM 389
Query: 399 KAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXX 458
+ L+AL LF +M G + + + + + +HG+
Sbjct: 390 AGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTA 449
Query: 459 XXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYN 518
+T+LL +C + A ++FD+ S+ A S+I Y+++G + L++
Sbjct: 450 FNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFH 509
Query: 519 Q-MKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGR 577
+ + + D+V+ +L C G + G +I + GY ++ + +
Sbjct: 510 RTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKA-GYFSDISLGNSLISMYAK 568
Query: 578 AGQIDEASKIIETV 591
D+A KI T+
Sbjct: 569 CCDSDDAIKIFNTM 582
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 162/358 (45%), Gaps = 16/358 (4%)
Query: 337 QLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSA 396
Q E K +HA ++ + + + NALI Y A +F ++ TVVS++A
Sbjct: 92 QYHDVEVTKAVHASFLKLREE-KTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTA 150
Query: 397 MIKAHAVHDQCLEALSLFIEMKLCG-TRVDFIIVINILPTFAKIGALHYVRYLHGYXXXX 455
+I + + +EAL +F M+ G + + + IL ++ +HG
Sbjct: 151 LISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKS 210
Query: 456 XXXXXXXXETSLLASYAK---CGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQ 512
SL++ Y K C ++ KLFDE +D+ +WN+++S+ K G+ +
Sbjct: 211 GFLNSVFVSNSLMSLYDKDSGSSCDDVL-KLFDE--IPQRDVASWNTVVSSLVKEGKSHK 267
Query: 513 CFELYNQM-KLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACM 571
F+L+ +M ++ D T LL++C +S ++ +G+E+ + + Q ++A +
Sbjct: 268 AFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNA-L 326
Query: 572 VDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNA 631
+ + + + + E + + DA + +++A + + + A + N+ KN
Sbjct: 327 IGFYSKFWDMKKVESLYEMM-MAQDAVTFTEMITA---YMSFGMVDSAVEIFANVTEKNT 382
Query: 632 GNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPG--CSWLESNGQVHEFRVADQSH 687
Y L + G K K+ + + RG++ T S +++ G V E +V++Q H
Sbjct: 383 ITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIH 440
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 181/641 (28%), Positives = 332/641 (51%), Gaps = 19/641 (2%)
Query: 52 LHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLF 111
L L Q +S++ D Y K G + F + DSV ++ I+ L +G E+ L+
Sbjct: 58 LSWLFQGNSIA----DFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLW 113
Query: 112 LYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEK 171
+ ++ P+ + V+ +C S+ + G+ +H +++ G V+NS++ +Y
Sbjct: 114 WFSKLRVWGFEPNTSTLVLVIHACRSLWFD-GEKIHGYVIRSGFCGISSVQNSILCMYAD 172
Query: 172 NGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKE-NIQPNSITVINL 230
+ L+A + + MS ++ W+ +I +S + +LF M E +P+ +TV ++
Sbjct: 173 SDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSV 232
Query: 231 LRSTVDLHLLKIGQALHSLIIVSNL-CGELTVNTALLSMYVKLGSLKDARLMFEKMPRND 289
L++ + + +G+++H I ++ V +L+ MY K + A +F++ +
Sbjct: 233 LKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRN 292
Query: 290 LVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHA 349
+V WN +++ + N E+LE+ + MV+ V D T + + + K +H
Sbjct: 293 IVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHG 352
Query: 350 HVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLE 409
+IR G + ++LID Y++C+ ++ A + D +T K VVS S MI A + E
Sbjct: 353 VIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDE 412
Query: 410 ALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXX-XXXETSLL 468
A+S+F M+ + I VI++L + L ++ HG TS++
Sbjct: 413 AISIFCHMR---DTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIV 469
Query: 469 ASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPD 528
+YAKCG IEMAR+ FD+ + K+II+W +ISAY+ +G + L+++MK P+
Sbjct: 470 DAYAKCGAIEMARRTFDQ--ITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPN 527
Query: 529 QVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKII 588
VT+L L+AC + GLV KG IFK MV+ ++PS +H++C+VD+L RAG+ID A ++I
Sbjct: 528 AVTYLAALSACNHGGLVKKGLMIFKSMVE-EDHKPSLQHYSCIVDMLSRAGEIDTAVELI 586
Query: 589 ETVP--LNSDARVYGPLLSACKMHSDPRL--AEVAAQKLINMEPKNAGNYVLLSNIYAAA 644
+ +P + + A +G +LS C+ + +EV A+ ++ +EP + Y+L S+ +AA
Sbjct: 587 KNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAE-VLELEPLCSSGYLLASSTFAAE 645
Query: 645 GKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQ 685
W+ VA MR +++R ++ G S + F D+
Sbjct: 646 KSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDK 686
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 191/387 (49%), Gaps = 17/387 (4%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQF 103
++IH G SS+ + ++ Y ++K+F D + +S ++R+ Q
Sbjct: 145 EKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQS 203
Query: 104 GEHEKTLFLYKEMV-EKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDL- 160
E L L+KEMV E PD + + VL++C + + G+ VH ++ G D D+
Sbjct: 204 KEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVF 263
Query: 161 VRNSLVELYEKNGFL--NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKE 218
V NSL+++Y K GF +A + + + WN++++ + + +E ++F M +E
Sbjct: 264 VCNSLIDMYSK-GFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQE 322
Query: 219 NIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDA 278
++ + +TV++LLR +++H +II ++L+ Y + DA
Sbjct: 323 AVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDA 382
Query: 279 RLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIP---AISSI 335
+ + M D+V + M+S A G E++ ++C +R P+ T I A S
Sbjct: 383 GTVLDSMTYKDVVSCSTMISGLAHAGRSDEAIS-IFCHMRD--TPNAITVISLLNACSVS 439
Query: 336 TQLKHTEWGKQMHAHVIRNG-SDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSW 394
L+ ++W H IR + +SV +++D Y+ C + ARR FD IT+K ++SW
Sbjct: 440 ADLRTSKWA---HGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISW 496
Query: 395 SAMIKAHAVHDQCLEALSLFIEMKLCG 421
+ +I A+A++ +AL+LF EMK G
Sbjct: 497 TVIISAYAINGLPDKALALFDEMKQKG 523
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 178/358 (49%), Gaps = 10/358 (2%)
Query: 29 TTSSLLDLCTKPQHL---QQIHARFFLHGLH-QNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
T +S+L CT + + + +H G + + + L+D Y+K + +VF
Sbjct: 228 TVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDE 287
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSC-FSVSHEQG 143
T + V +++IL +++ L ++ MV++++ DE + +LR C F
Sbjct: 288 TTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPC 347
Query: 144 KMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFES 202
K +H I++ G ++ ++ +SL++ Y ++ A L+ M+ ++ + MIS +
Sbjct: 348 KSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHA 407
Query: 203 GKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLC-GELTV 261
G+ +E +F MR PN+ITVI+LL + L+ + H + I +L +++V
Sbjct: 408 GRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISV 464
Query: 262 NTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGV 321
T+++ Y K G+++ AR F+++ +++ W +++SAYA NG P ++L L M + G
Sbjct: 465 GTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGY 524
Query: 322 RPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSA 379
P+ T + A+S+ + G + ++ + ++ ++DM S +++A
Sbjct: 525 TPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTA 582
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 264 bits (675), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 189/674 (28%), Positives = 334/674 (49%), Gaps = 42/674 (6%)
Query: 37 CTKPQHLQQ---IHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIY 93
C K Q ++ I A G+ QN +++ ++ Y F L + KVF + V +
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 94 SAILRNLSQFGEHEKTLFLYKEMVE-KSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQIV 151
+ ++ + G+ K + LY+ M++ + +E S VL++C V Q G +V+ +I
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 152 KLGMDAFDLVRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQ 210
K + ++ NS+V++Y KNG + A+ + + WN +IS ++G M+E
Sbjct: 135 KENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVT 194
Query: 211 LFSRMRKENI--------------QPNSIT-VINLLRSTVDLH---------------LL 240
LF RM + N+ P ++ ++ + R + L LL
Sbjct: 195 LFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLL 254
Query: 241 KIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMF--EKMPRNDLV-VWNIMV 297
+G+ LH ++ S L +AL+ MY GSL A +F EK+ N V VWN M+
Sbjct: 255 TMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSML 314
Query: 298 SAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSD 357
S + N + +L L+ + +S + D +T A+ + G Q+H+ V+ +G +
Sbjct: 315 SGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYE 374
Query: 358 YQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEM 417
V + L+D+++ + A ++F + +K ++++S +I+ A LF E+
Sbjct: 375 LDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFREL 434
Query: 418 KLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCI 477
G D IV NIL + + +L + + +HG T+L+ Y KCG I
Sbjct: 435 IKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEI 494
Query: 478 EMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLT 537
+ LFD +D+++W +I + ++G + F +++M ++P++VTFLGLL+
Sbjct: 495 DNGVVLFD--GMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLS 552
Query: 538 ACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDA 597
AC +SGL+++ + + M YG +P EH+ C+VDLLG+AG EA+++I +PL D
Sbjct: 553 ACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDK 612
Query: 598 RVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFL 657
++ LL+AC H + L V A+KL+ P + Y LSN YA G WD+++K+R
Sbjct: 613 TIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAA 672
Query: 658 RDRGLKKTPGCSWL 671
+ G K++ G SW+
Sbjct: 673 KKLGAKES-GMSWI 685
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 179/430 (41%), Gaps = 38/430 (8%)
Query: 231 LRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDL 290
LR + K G+++ + +I + + + ++SMYV L DA +F++M ++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 291 VVWNIMVSAYAGNGCPKESLELVYCMVRS---GVRPDMFTAIPAISSITQLKHTEWGKQM 347
V W MVS Y +G P +++EL M+ S M++A+ + + + + G +
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAV--LKACGLVGDIQLGILV 129
Query: 348 HAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQC 407
+ + + V + N+++DMY L A F I + SW+ +I +
Sbjct: 130 YERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLM 189
Query: 408 LEALSLFIEM-----------------KLCGTRVDFIIVIN----ILPTFAKI------- 439
EA++LF M K ++F++ + +L FA
Sbjct: 190 DEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACS 249
Query: 440 --GALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGK-SSHKDIIA 496
G L + LH ++L+ Y+ CG + A +F + K + + +
Sbjct: 250 FGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAV 309
Query: 497 WNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMV 556
WNSM+S + + E L Q+ S++ D T G L C+N + G ++ +V
Sbjct: 310 WNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQV-HSLV 368
Query: 557 DLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLA 616
+ GY+ + +VDL G I +A K+ +P N D + L+ C LA
Sbjct: 369 VVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSGFNSLA 427
Query: 617 EVAAQKLINM 626
++LI +
Sbjct: 428 FYLFRELIKL 437
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 137/279 (49%), Gaps = 7/279 (2%)
Query: 28 FTTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
+T S L +C +L+ Q+H+ + G + + S L+D + G + K+F+
Sbjct: 343 YTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHR 402
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSV-SHEQG 143
N D + +S ++R + G + +L++E+++ + D+ S +L+ C S+ S G
Sbjct: 403 LPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWG 462
Query: 144 KMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFES 202
K +H +K G ++ + +LV++Y K G + N +GM ++ W +I ++
Sbjct: 463 KQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQN 522
Query: 203 GKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQA-LHSLIIVSNLCGELTV 261
G++EE F+ F +M I+PN +T + LL + LL+ ++ L ++ L L
Sbjct: 523 GRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEH 582
Query: 262 NTALLSMYVKLGSLKDARLMFEKMP-RNDLVVWNIMVSA 299
++ + + G ++A + KMP D +W +++A
Sbjct: 583 YYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTA 621
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 192/659 (29%), Positives = 316/659 (47%), Gaps = 40/659 (6%)
Query: 29 TTSSLLDLCTKPQHL---QQIHARFFLHGLHQNS--SLSSKLMDCYTKFGLPGLSQKVFY 83
T S ++ C+ + L + +H G + S+ + ++ Y+K G ++ VF
Sbjct: 291 TFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFE 350
Query: 84 FTENPDSVIYSAILRNLSQFGEHEKTLFLYKEM--VEKSMYPDEESCSFVLRSCFSVS-H 140
D + +AIL + G E+ + +M V+K + PD + + C +S
Sbjct: 351 ELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDK-IQPDIATVVSITSICGDLSFS 409
Query: 141 EQGKMVHAQIVKLGMDAFDL-VRNSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQ 198
+G+ VH V++ M + L V NS++++Y K G E L + + +L WN+MIS
Sbjct: 410 REGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISA 469
Query: 199 AFESGKMEECFQLFSRMRKE-NIQPNSI-TVINLLRSTVDLHLLKIGQALHSLIIVSNLC 256
++G + LF + E + S+ TV+ +L S L G+++H +
Sbjct: 470 FSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWL------ 523
Query: 257 GELTVNTALLSMYVKLGSLKDARLMFEKMPRN-DLVVWNIMVSAYAGNGCPKESLELVYC 315
KLG L A L E M DL WN ++S A +G ESL
Sbjct: 524 -------------QKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQA 570
Query: 316 MVRSG-VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACN 374
M R G +R D+ T + IS+ L G+ H I++ + + N LI MY C
Sbjct: 571 MSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCK 630
Query: 375 GLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILP 434
+ SA ++F LI+D + SW+ +I A + + E LF +KL + F+ +L
Sbjct: 631 DIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFV---GLLS 687
Query: 435 TFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDI 494
++G+ Y H + +L+ Y+ CG +E K+F S I
Sbjct: 688 ASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFR--NSGVNSI 745
Query: 495 IAWNSMISAYSKHGEWFQCFELYNQMKL-SNVKPDQVTFLGLLTACVNSGLVDKGKEIFK 553
AWNS+ISA+ HG + EL+ ++ S ++P++ +F+ LL+AC +SG +D+G +K
Sbjct: 746 SAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYK 805
Query: 554 EMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDP 613
+M + +G +P EH +VD+LGRAG++ EA + I + A V+G LLSAC H D
Sbjct: 806 QMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDT 865
Query: 614 RLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLE 672
+L + A+ L MEP NA Y+ L+N Y G W++ ++R + D LKK PG S ++
Sbjct: 866 KLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVID 924
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 155/597 (25%), Positives = 271/597 (45%), Gaps = 37/597 (6%)
Query: 54 GLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLY 113
GL +SSL + LM+ Y K ++ VF E+ D V ++ I+ G K+L +
Sbjct: 218 GLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYF 277
Query: 114 KEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGM--DAFDLVRNSLVELYE 170
K M D + S V+ +C S+ G+ +H ++K G +A V NS++ +Y
Sbjct: 278 KSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYS 337
Query: 171 KNGFLNAHEPL-EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRK-ENIQPNSITVI 228
K G A E + E + ++ N +++ +G EE F + ++M+ + IQP+ TV+
Sbjct: 338 KCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVV 397
Query: 229 NLLRSTVDLHLLKIGQALHSLIIVSNLCGE-LTVNTALLSMYVKLGSLKDARLMFEKMPR 287
++ DL + G+A+H + + L V +++ MY K G A L+F+
Sbjct: 398 SITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTH 457
Query: 288 NDLVVWNIMVSAYAGNGCPKESLELVYCMVR--SGVRPDMFTAIPAISSITQLKHTEWGK 345
DLV WN M+SA++ NG ++ L +V S + + T + ++S +GK
Sbjct: 458 RDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGK 517
Query: 346 QMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHD 405
+H + + G D+ SA L + DL SW+++I A
Sbjct: 518 SVHCWLQKLG------------DLTSAFLRLETMSETRDL------TSWNSVISGCASSG 559
Query: 406 QCLEALSLFIEMKLCGT-RVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXE 464
LE+L F M G R D I ++ + +G + R HG +
Sbjct: 560 HHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQ 619
Query: 465 TSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSN 524
+L+ Y +C IE A K+F G S ++ +WN +ISA S++ + F+L+ +KL
Sbjct: 620 NTLITMYGRCKDIESAVKVF--GLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKL-- 675
Query: 525 VKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEA 584
+P+++TF+GLL+A G G + ++ G+Q + A +VD+ G ++
Sbjct: 676 -EPNEITFVGLLSASTQLGSTSYGMQAHCHLIR-RGFQANPFVSAALVDMYSSCGMLETG 733
Query: 585 SKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLIN---MEPKNAGNYVLLS 638
K+ +NS + + ++SA H A ++L + MEP + LLS
Sbjct: 734 MKVFRNSGVNSIS-AWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLS 789
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 143/556 (25%), Positives = 253/556 (45%), Gaps = 34/556 (6%)
Query: 112 LYKEMVEKSMYPDEESCSF---VLRS-CFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVE 167
L+ E+ E+ E S F VLRS E + VH +K G+ + L+
Sbjct: 71 LFDELPERENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLT 130
Query: 168 LYEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSIT 226
Y + G L + L + + ++ WN+MI+ ++G+ LF M + + +S T
Sbjct: 131 FYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTT 190
Query: 227 VINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMP 286
++ + LHL + LH L I + L G+ ++ AL+++Y K +L A +F M
Sbjct: 191 LLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHME 250
Query: 287 RNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQ 346
D+V WN +++ NG P++SL+ M SG D T IS+ + ++ G+
Sbjct: 251 HRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGES 310
Query: 347 MHAHVIRNG--SDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVH 404
+H VI++G + VSV N++I MYS C +A +F+ + + V+S +A++ A +
Sbjct: 311 LHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAAN 370
Query: 405 DQCLEALSLFIEMK-LCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXX 463
EA + +M+ + + D V++I + R +HGY
Sbjct: 371 GMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALE 430
Query: 464 E-TSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQM-- 520
S++ Y KCG A LF ++H+D+++WNSMISA+S++G + L+ ++
Sbjct: 431 VINSVIDMYGKCGLTTQAELLFK--TTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVS 488
Query: 521 KLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQ 580
+ S K T L +LT+C +S + IF + V + L + G
Sbjct: 489 EYSCSKFSLSTVLAILTSCDSSDSL-----IFGKSVHCW---------------LQKLGD 528
Query: 581 IDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNI 640
+ A +ET+ D + ++S C S L + A + ++ E K + + L
Sbjct: 529 LTSAFLRLETMSETRDLTSWNSVISGCA-SSGHHLESLRAFQAMSREGKIRHDLITLLGT 587
Query: 641 YAAAGKWDKVAKMRSF 656
+A+G V + R F
Sbjct: 588 ISASGNLGLVLQGRCF 603
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 134/592 (22%), Positives = 269/592 (45%), Gaps = 31/592 (5%)
Query: 5 HNLFHLLNIRKIPYIVAPFQTRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSK 64
HNLF L R+ + + F S + + T+ + + +H GL Q+ + SSK
Sbjct: 69 HNLFDELPERENRTMESSFMFLRDVLRSFM-MRTETETPRSVHCFALKCGLLQDLATSSK 127
Query: 65 LMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEK-SMYP 123
L+ Y + G S +F + D +++++++ L+Q G + + L+ EM+ K + +
Sbjct: 128 LLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFD 187
Query: 124 DEESCSFVLRSCFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL-E 182
+ M+H ++ G+ + N+L+ LY K L++ E +
Sbjct: 188 STTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFT 247
Query: 183 GMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKI 242
M ++ WN ++++ +G + Q F M + +++T ++ + + L +
Sbjct: 248 HMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTL 307
Query: 243 GQALHSLIIVSNLCGE--LTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAY 300
G++LH L+I S E ++V +++SMY K G + A +FE++ D++ N +++ +
Sbjct: 308 GESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGF 367
Query: 301 AGNGCPKESLELVYCMVR-SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIR-NGSDY 358
A NG +E+ ++ M ++PD+ T + S L + G+ +H + +R
Sbjct: 368 AANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSR 427
Query: 359 QVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEM- 417
+ V N++IDMY C A +F T + +VSW++MI A + + +A +LF E+
Sbjct: 428 ALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVV 487
Query: 418 -KLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGC 476
+ ++ V+ IL + +L + + +H + K G
Sbjct: 488 SEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQ-------------------KLGD 528
Query: 477 IEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQM-KLSNVKPDQVTFLGL 535
+ A L E S +D+ +WNS+IS + G + + M + ++ D +T LG
Sbjct: 529 LTSAF-LRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGT 587
Query: 536 LTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKI 587
++A N GLV +G+ F + + + ++ + GR I+ A K+
Sbjct: 588 ISASGNLGLVLQGR-CFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKV 638
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/473 (31%), Positives = 253/473 (53%), Gaps = 41/473 (8%)
Query: 265 LLSMYVKLGSLKD------ARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVR 318
L+ +VK +L D A + ++ + L N M+ A+ + P++S + ++
Sbjct: 40 LVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILS 99
Query: 319 SG--VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGL 376
SG ++PD +T + + T L+ E G Q+H IR G D V LI +Y+ L
Sbjct: 100 SGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCL 159
Query: 377 NS-------------------------------ARRIFDLITDKTVVSWSAMIKAHAVHD 405
+S AR++F+ + ++ ++W+AMI +A
Sbjct: 160 DSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVG 219
Query: 406 QCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXET 465
+ EAL++F M+L G +V+ + +I++L ++GAL R+ H Y T
Sbjct: 220 ESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLAT 279
Query: 466 SLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNV 525
+L+ YAKCG +E A ++F K++ W+S ++ + +G +C EL++ MK V
Sbjct: 280 TLVDLYAKCGDMEKAMEVF--WGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGV 337
Query: 526 KPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEAS 585
P+ VTF+ +L C G VD+G+ F M + +G +P EH+ C+VDL RAG++++A
Sbjct: 338 TPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAV 397
Query: 586 KIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAG 645
II+ +P+ A V+ LL A +M+ + L +A++K++ +E N G YVLLSNIYA +
Sbjct: 398 SIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSN 457
Query: 646 KWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILK 698
WD V+ +R ++ +G++K PGCS +E NG+VHEF V D+SHP+ I ++ K
Sbjct: 458 DWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWK 510
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 177/409 (43%), Gaps = 41/409 (10%)
Query: 32 SLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCY--TKFGLPGLSQKVFYFTENPD 89
+LLD + ++QIHA+ ++ G ++ L + + + ++ +E P
Sbjct: 11 ALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPT 70
Query: 90 SVIYSAILRNLSQFGEHEKTLFLYKEMVE--KSMYPDEESCSFVLRSCFSVS-HEQGKMV 146
++++R + EK+ Y+ ++ + PD + +F++++C + E G V
Sbjct: 71 LFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQV 130
Query: 147 HAQIVKLGMDAFDLVRNSLVELYEKNGFLN------------------------------ 176
H ++ G D V+ L+ LY + G L+
Sbjct: 131 HGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDV 190
Query: 177 --AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRST 234
A + EGM + WN MIS + G+ E +F M+ E ++ N + +I++L +
Sbjct: 191 VFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSAC 250
Query: 235 VDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWN 294
L L G+ HS I + + + + T L+ +Y K G ++ A +F M ++ W+
Sbjct: 251 TQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWS 310
Query: 295 IMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRN 354
++ A NG ++ LEL M + GV P+ T + + + + + G Q H +RN
Sbjct: 311 SALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFDSMRN 369
Query: 355 --GSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKT-VVSWSAMIKA 400
G + Q+ + L+D+Y+ L A I + K WS+++ A
Sbjct: 370 EFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 132/284 (46%), Gaps = 39/284 (13%)
Query: 193 NNMISQAFESGKMEECFQLFSRM--RKENIQPNSITVINLLRSTVDLHLLKIGQALHSLI 250
N+MI +S E+ F + R+ +++P++ TV L+++ L + + G +H +
Sbjct: 75 NSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMT 134
Query: 251 IVSNLCGELTVNTALLSMYVKLGSLKD-------------------------------AR 279
I + V T L+S+Y +LG L AR
Sbjct: 135 IRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFAR 194
Query: 280 LMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLK 339
+FE MP D + WN M+S YA G +E+L + + M GV+ + I +S+ TQL
Sbjct: 195 KLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLG 254
Query: 340 HTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIK 399
+ G+ H+++ RN V + L+D+Y+ C + A +F + +K V +WS+ +
Sbjct: 255 ALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALN 314
Query: 400 AHAVH---DQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIG 440
A++ ++CLE SL MK G + + +++L + +G
Sbjct: 315 GLAMNGFGEKCLELFSL---MKQDGVTPNAVTFVSVLRGCSVVG 355
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 164/537 (30%), Positives = 272/537 (50%), Gaps = 16/537 (2%)
Query: 144 KMVHAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAFES 202
K H +VK G+ ++N L++ Y K F +A + + M + + WN +I +
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQR 115
Query: 203 G-----KMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCG 257
+ F SR+ ++ + ++ + L+R D +K G LH L++ L
Sbjct: 116 DGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLES 175
Query: 258 ELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMV 317
+T+L+ Y K G + +AR +FE + DLV+WN +VS+Y NG E+ L+ M
Sbjct: 176 SCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMG 235
Query: 318 --RSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNG 375
++ R D FT SS+ E GKQ+HA + + + + V AL++MY+ N
Sbjct: 236 SDKNRFRGDYFT----FSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNH 291
Query: 376 LNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPT 435
L+ AR F+ + + VVSW+AMI A + + EA+ LF +M L + D + ++L +
Sbjct: 292 LSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSS 351
Query: 436 FAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDII 495
AK A+ ++ + SL++SY++ G + A F + D++
Sbjct: 352 CAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR--EPDLV 409
Query: 496 AWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEM 555
+W S+I A + HG + +++ M L ++PD++TFL +L+AC + GLV +G FK M
Sbjct: 410 SWTSVIGALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRM 468
Query: 556 VDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRL 615
+ Y + EH+ C++DLLGRAG IDEAS ++ ++P C +H
Sbjct: 469 TEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRES 528
Query: 616 AEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLK-KTPGCSWL 671
+ A+KL+ +EP NY +LSN Y + G W++ A +R R KTPGCSWL
Sbjct: 529 MKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 191/400 (47%), Gaps = 15/400 (3%)
Query: 43 LQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQ 102
++Q H G++ + L +KL+ YTK + K+F + V ++ ++ + Q
Sbjct: 55 VKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQ 114
Query: 103 FG---EHEKTL-FLY-KEMVEKSMYPDEESCSFVLRSCF-SVSHEQGKMVHAQIVKLGMD 156
H L F Y ++ + D S ++R C S + + G +H +VK G++
Sbjct: 115 RDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLE 174
Query: 157 AFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRM 215
+ SLV Y K G + A E + +L WN ++S +G ++E F L M
Sbjct: 175 SSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLM 234
Query: 216 --RKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLG 273
K + + T +LL + ++ G+ +H+++ + ++ V TALL+MY K
Sbjct: 235 GSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSN 290
Query: 274 SLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAIS 333
L DAR FE M ++V WN M+ +A NG +E++ L M+ ++PD T +S
Sbjct: 291 HLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLS 350
Query: 334 SITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVS 393
S + KQ+ A V + GS +SV N+LI YS L+ A F I + +VS
Sbjct: 351 SCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVS 410
Query: 394 WSAMIKAHAVHDQCLEALSLFIEM--KLCGTRVDFIIVIN 431
W+++I A A H E+L +F M KL ++ F+ V++
Sbjct: 411 WTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLS 450
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 161/311 (51%), Gaps = 12/311 (3%)
Query: 33 LLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPD 89
L+ LCT +++ Q+H GL + S+ L+ Y K GL +++VF + D
Sbjct: 148 LIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRD 207
Query: 90 SVIYSAILRNLSQFGEHEKTLFLYKEM-VEKSMY-PDEESCSFVLRSCFSVSHEQGKMVH 147
V+++A++ + G ++ L K M +K+ + D + S +L +C EQGK +H
Sbjct: 208 LVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC---RIEQGKQIH 264
Query: 148 AQIVKLGMDAFDL-VRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKM 205
A + K+ FD+ V +L+ +Y K+ L +A E E M V + WN MI ++G+
Sbjct: 265 AILFKVSYQ-FDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEG 323
Query: 206 EECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTAL 265
E +LF +M EN+QP+ +T ++L S + + + +++ L+V +L
Sbjct: 324 REAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSL 383
Query: 266 LSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDM 325
+S Y + G+L +A L F + DLV W ++ A A +G +ESL++ M++ ++PD
Sbjct: 384 ISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDK 442
Query: 326 FTAIPAISSIT 336
T + +S+ +
Sbjct: 443 ITFLEVLSACS 453
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 128/270 (47%), Gaps = 11/270 (4%)
Query: 23 FQTRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVF 82
F+ +FT SSLL C Q +QIHA F + +++ L++ Y K +++ F
Sbjct: 241 FRGDYFTFSSLLSACRIEQG-KQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECF 299
Query: 83 YFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSC--FSVSH 140
+ V ++A++ +Q GE + + L+ +M+ +++ PDE + + VL SC FS
Sbjct: 300 ESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIW 359
Query: 141 EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL---EGMSVTELAYWNNMIS 197
E K V A + K G F V NSL+ Y +NG N E L + +L W ++I
Sbjct: 360 EI-KQVQAMVTKKGSADFLSVANSLISSYSRNG--NLSEALLCFHSIREPDLVSWTSVIG 416
Query: 198 QAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIG-QALHSLIIVSNLC 256
G EE Q+F M ++ +QP+ IT + +L + L++ G + + +
Sbjct: 417 ALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIE 475
Query: 257 GELTVNTALLSMYVKLGSLKDARLMFEKMP 286
E T L+ + + G + +A + MP
Sbjct: 476 AEDEHYTCLIDLLGRAGFIDEASDVLNSMP 505
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 28/268 (10%)
Query: 338 LKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAM 397
L H KQ H +++ G + + N L+ Y+ + A ++FD + + +V+W+ +
Sbjct: 49 LDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNIL 108
Query: 398 IKA---------HAVH-DQCLEALSLFIEMKLCGTRVDFIIVINIL--PTFAKIGALHYV 445
I H H C + LF ++ L V F+ +I + T K G
Sbjct: 109 IHGVIQRDGDTNHRAHLGFCYLSRILFTDVSL--DHVSFMGLIRLCTDSTNMKAGI---- 162
Query: 446 RYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYS 505
LH TSL+ Y KCG I AR++F+ +D++ WN+++S+Y
Sbjct: 163 -QLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFE--AVLDRDLVLWNALVSSYV 219
Query: 506 KHGEWFQCFELYNQM--KLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQP 563
+G + F L M + + D TF LL+AC +++GK+I + + YQ
Sbjct: 220 LNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKV-SYQF 274
Query: 564 SQEHHACMVDLLGRAGQIDEASKIIETV 591
++++ ++ + +A + E++
Sbjct: 275 DIPVATALLNMYAKSNHLSDARECFESM 302
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 168/537 (31%), Positives = 275/537 (51%), Gaps = 51/537 (9%)
Query: 164 SLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQP 222
++V Y ++ L+ E L + M + WN MI +SG++++ +LF M + NI
Sbjct: 114 AMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVS 173
Query: 223 -NSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLM 281
NS+ + R +D + + + + +VS TA++ K G + +AR +
Sbjct: 174 WNSMVKALVQRGRID-EAMNLFERMPRRDVVSW--------TAMVDGLAKNGKVDEARRL 224
Query: 282 FEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHT 341
F+ MP +++ WN M++ YA N E+ +L F +P +
Sbjct: 225 FDCMPERNIISWNAMITGYAQNNRIDEADQL-------------FQVMP------ERDFA 265
Query: 342 EWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAH 401
W M IRN +M AC +FD + +K V+SW+ MI +
Sbjct: 266 SWN-TMITGFIRNR------------EMNKACG-------LFDRMPEKNVISWTTMITGY 305
Query: 402 AVHDQCLEALSLFIEMKLCGT-RVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXX 460
+ + EAL++F +M G+ + + ++IL + + L + +H
Sbjct: 306 VENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKN 365
Query: 461 XXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQM 520
++LL Y+K G + ARK+FD G +D+I+WNSMI+ Y+ HG + E+YNQM
Sbjct: 366 EIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQM 425
Query: 521 KLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQ 580
+ KP VT+L LL AC ++GLV+KG E FK++V +EH+ C+VDL GRAG+
Sbjct: 426 RKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGR 485
Query: 581 IDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNI 640
+ + + I YG +LSAC +H++ +A+ +K++ +AG YVL+SNI
Sbjct: 486 LKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNI 545
Query: 641 YAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
YAA GK ++ A+MR ++++GLKK PGCSW++ Q H F V D+SHP+ + SIL
Sbjct: 546 YAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSIL 602
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 152/299 (50%), Gaps = 29/299 (9%)
Query: 163 NSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQ 221
N++++ Y ++G ++ A E + M + WN+M+ + G+++E LF RM + ++
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV 203
Query: 222 PNSITVINLL-----------------RSTVDLHLLKIGQALHSLIIVSNLCGEL----- 259
+ V L R+ + + + G A ++ I ++ ++
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERD 263
Query: 260 --TVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMV 317
+ NT +++ +++ + A +F++MP +++ W M++ Y N +E+L + M+
Sbjct: 264 FASWNT-MITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKML 322
Query: 318 RSG-VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGL 376
R G V+P++ T + +S+ + L G+Q+H + ++ V +AL++MYS L
Sbjct: 323 RDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGEL 382
Query: 377 NSARRIFD--LITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINIL 433
+AR++FD L+ + ++SW++MI +A H EA+ ++ +M+ G + + +N+L
Sbjct: 383 IAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLL 441
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 164/357 (45%), Gaps = 48/357 (13%)
Query: 265 LLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPD 324
L+ K+G + +AR +F+ +P D+V W +++ Y G +E+ EL R R +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREAREL---FDRVDSRKN 108
Query: 325 MFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFD 384
+ T +S + K + + + + V N +ID Y+ ++ A +FD
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEM----PERNVVSWNTMIDGYAQSGRIDKALELFD 164
Query: 385 LITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHY 444
+ ++ +VSW++M+KA + EA++LF M R D + ++ AK G +
Sbjct: 165 EMPERNIVSWNSMVKALVQRGRIDEAMNLFERM----PRRDVVSWTAMVDGLAKNGKVDE 220
Query: 445 VRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDE------------------ 486
R L +++ YA+ I+ A +LF
Sbjct: 221 ARRLFDCMPERNIISW----NAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIR 276
Query: 487 -----------GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQM-KLSNVKPDQVTFLG 534
+ K++I+W +MI+ Y ++ E + ++++M + +VKP+ T++
Sbjct: 277 NREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVS 336
Query: 535 LLTACVN-SGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIET 590
+L+AC + +GLV+ G++I +++ +Q ++ + ++++ ++G++ A K+ +
Sbjct: 337 ILSACSDLAGLVE-GQQIH-QLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDN 391
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 99/193 (51%), Gaps = 6/193 (3%)
Query: 91 VIYSAILRNLSQFGEHEKTLFLYKEMV-EKSMYPDEESCSFVLRSCFSVSH-EQGKMVHA 148
+ ++ ++ + E+E+ L ++ +M+ + S+ P+ + +L +C ++ +G+ +H
Sbjct: 296 ISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQ 355
Query: 149 QIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVT---ELAYWNNMISQAFESGKM 205
I K ++V ++L+ +Y K+G L A + + +L WN+MI+ G
Sbjct: 356 LISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHG 415
Query: 206 EECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIG-QALHSLIIVSNLCGELTVNTA 264
+E +++++MRK +P+++T +NLL + L++ G + L+ +L T
Sbjct: 416 KEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTC 475
Query: 265 LLSMYVKLGSLKD 277
L+ + + G LKD
Sbjct: 476 LVDLCGRAGRLKD 488
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 262 bits (669), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 145/461 (31%), Positives = 249/461 (54%), Gaps = 6/461 (1%)
Query: 244 QALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGN 303
Q +H+ +IV+ ++ T L+++ ++ L+F +P D ++N ++ + +
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 304 GCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVH 363
P + M+ S V P +T I S L GK +H H + +G V
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQ 145
Query: 364 NALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTR 423
AL+ YS C + AR++FD + +K++V+W++++ + EA+ +F +M+ G
Sbjct: 146 AALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFE 205
Query: 424 VDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKL 483
D +++L A+ GA+ ++H Y T+L+ Y++CG + AR++
Sbjct: 206 PDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREV 265
Query: 484 FDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLS-NVKPDQVTFLGLLTACVNS 542
FD+ K + ++ AW +MISAY HG Q EL+N+M+ P+ VTF+ +L+AC ++
Sbjct: 266 FDKMKET--NVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHA 323
Query: 543 GLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDAR---V 599
GLV++G+ ++K M Y P EHH CMVD+LGRAG +DEA K I + A +
Sbjct: 324 GLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPAL 383
Query: 600 YGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRD 659
+ +L ACKMH + L A++LI +EP N G++V+LSNIYA +GK D+V+ +R +
Sbjct: 384 WTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMR 443
Query: 660 RGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILKVM 700
L+K G S +E + + F + D+SH + +IY L+ +
Sbjct: 444 NNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETL 484
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 181/392 (46%), Gaps = 41/392 (10%)
Query: 208 CFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLS 267
C + RM N+ P++ T ++++S DL L+IG+ +H +VS + V AL++
Sbjct: 91 CVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVT 150
Query: 268 MYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFT 327
Y K G ++ AR +F++MP +V WN +VS + NG E++++ Y M SG PD T
Sbjct: 151 FYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSAT 210
Query: 328 AIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLIT 387
+ +S+ Q G +H ++I G D V + ALI++YS C + AR +FD +
Sbjct: 211 FVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK 270
Query: 388 DKTVVSWSAMIKAHAVHDQCLEALSLFIEMK-LCGTRVDFIIVINILPTFAKIGALHYVR 446
+ V +W+AMI A+ H +A+ LF +M+ CG I N+ TF
Sbjct: 271 ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGP-----IPNNV--TF---------- 313
Query: 447 YLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWN---SMISA 503
++L++ A G +E R ++ S++ I M+
Sbjct: 314 ------------------VAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDM 355
Query: 504 YSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQP 563
+ G + ++ +Q+ + + +L AC D G EI K ++ L P
Sbjct: 356 LGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNP 415
Query: 564 SQEHHACMVDLLGRAGQIDEASKIIETVPLNS 595
HH + ++ +G+ DE S I + + N+
Sbjct: 416 G--HHVMLSNIYALSGKTDEVSHIRDGMMRNN 445
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 182/377 (48%), Gaps = 14/377 (3%)
Query: 39 KPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILR 98
+ + LQQ+HA + G ++ SL +KL+ + +F PD +++++++
Sbjct: 21 RVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIK 80
Query: 99 NLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQIVKLGMDA 157
+ S+ + Y+ M+ ++ P + + V++SC +S + GK VH V G
Sbjct: 81 STSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGL 140
Query: 158 FDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMR 216
V+ +LV Y K G + A + + M + WN+++S ++G +E Q+F +MR
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 217 KENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLK 276
+ +P+S T ++LL + + +G +H II L + + TAL+++Y + G +
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVG 260
Query: 277 DARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRS-GVRPDMFTAIPAISSI 335
AR +F+KM ++ W M+SAY +G ++++EL M G P+ T + +S+
Sbjct: 261 KAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC 320
Query: 336 TQLKHTEWGKQMHAHVIRNGSDYQ----VSVHNALIDMYSACNGLNSARRI---FDLITD 388
E G+ ++ + ++ Y+ V H ++DM L+ A + D
Sbjct: 321 AHAGLVEEGRSVYKRMTKS---YRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGK 377
Query: 389 KTVVS-WSAMIKAHAVH 404
T + W+AM+ A +H
Sbjct: 378 ATAPALWTAMLGACKMH 394
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 261 bits (668), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 153/491 (31%), Positives = 247/491 (50%), Gaps = 36/491 (7%)
Query: 244 QALHSLIIVSNLCGELTVNTALLSMYVKLGS---LKDARLMFEKMPRNDLVVWNIMVSAY 300
+ +H+ ++ + L + T LS + S L A+++F+ R D +WN+M+ +
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 301 AGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQV 360
+ + P+ SL L M+ S + +T + + + L E Q+HA + + G + V
Sbjct: 91 SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDV 150
Query: 361 SVHNALIDMYSACNGLNSARRIFDLI-------------------------------TDK 389
N+LI+ Y+ A +FD I +K
Sbjct: 151 YAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK 210
Query: 390 TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLH 449
+SW+ MI + D EAL LF EM+ D + + N L A++GAL +++H
Sbjct: 211 NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIH 270
Query: 450 GYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGE 509
Y L+ YAKCG +E A ++F K K + AW ++IS Y+ HG
Sbjct: 271 SYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK--KSVQAWTALISGYAYHGH 328
Query: 510 WFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHA 569
+ + +M+ +KP+ +TF +LTAC +GLV++GK IF M Y +P+ EH+
Sbjct: 329 GREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYG 388
Query: 570 CMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPK 629
C+VDLLGRAG +DEA + I+ +PL +A ++G LL AC++H + L E + LI ++P
Sbjct: 389 CIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPY 448
Query: 630 NAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPR 689
+ G YV +NI+A KWDK A+ R ++++G+ K PGCS + G HEF D+SHP
Sbjct: 449 HGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPE 508
Query: 690 SVDIYSILKVM 700
I S ++M
Sbjct: 509 IEKIQSKWRIM 519
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 200/420 (47%), Gaps = 46/420 (10%)
Query: 27 FFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMD-CYTKFG---LPGLSQKVF 82
+ T S L C+K + L+QIHAR GL Q+S +K + C + LP +Q VF
Sbjct: 14 LYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLP-YAQIVF 72
Query: 83 YFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVS-HE 141
+ PD+ +++ ++R S E E++L LY+ M+ S + + +L++C ++S E
Sbjct: 73 DGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE 132
Query: 142 QGKMVHAQIVKLGMDAFDLVRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAF 200
+ +HAQI KLG + NSL+ Y G F AH + + + WN++I
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 201 ESGKME-------------------------------ECFQLFSRMRKENIQPNSITVIN 229
++GKM+ E QLF M+ +++P+++++ N
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252
Query: 230 LLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRND 289
L + L L+ G+ +HS + + + + + L+ MY K G +++A +F+ + +
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS 312
Query: 290 LVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHA 349
+ W ++S YA +G +E++ M + G++P++ T +++ + E GK +
Sbjct: 313 VQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFY 372
Query: 350 HVIRNGSDYQ----VSVHNALIDMYSACNGLNSARR-IFDLITDKTVVSWSAMIKAHAVH 404
+ R DY + + ++D+ L+ A+R I ++ V W A++KA +H
Sbjct: 373 SMER---DYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIH 429
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 155/358 (43%), Gaps = 44/358 (12%)
Query: 127 SCSFVLR-------SCFS--VSHEQGKMVHAQIVKLGM--DAFDLVRN-SLVELYEKNGF 174
SCSF L SC E+ K +HA+++K G+ D++ + + S + F
Sbjct: 5 SCSFSLEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDF 64
Query: 175 LN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRS 233
L A +G + WN MI S + E L+ RM + N+ T +LL++
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 234 TVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVW 293
+L + +H+ I ++ +L++ Y G+ K A L+F+++P D V W
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 294 N-------------------------------IMVSAYAGNGCPKESLELVYCMVRSGVR 322
N M+S Y KE+L+L + M S V
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 323 PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRI 382
PD + A+S+ QL E GK +H+++ + + LIDMY+ C + A +
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEV 304
Query: 383 FDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIG 440
F I K+V +W+A+I +A H EA+S F+EM+ G + + I +L + G
Sbjct: 305 FKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTG 362
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 130/320 (40%), Gaps = 38/320 (11%)
Query: 331 AISSITQLKHTEWGKQMHAHVIRNG---SDYQVSVHNALIDMYSACNGLNSARRIFDLIT 387
+S + + E KQ+HA +++ G Y ++ + ++ + L A+ +FD
Sbjct: 17 TMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFD 76
Query: 388 DKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRY 447
W+ MI+ + D+ +L L+ M + ++L + + A
Sbjct: 77 RPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ 136
Query: 448 LHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKH 507
+H SL+ SYA G ++A LFD + D ++WNS+I Y K
Sbjct: 137 IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFD--RIPEPDDVSWNSVIKGYVKA 194
Query: 508 GE------------------WF-------------QCFELYNQMKLSNVKPDQVTFLGLL 536
G+ W + +L+++M+ S+V+PD V+ L
Sbjct: 195 GKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANAL 254
Query: 537 TACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSD 596
+AC G +++GK I ++ + ++D+ + G+++EA ++ + + S
Sbjct: 255 SACAQLGALEQGKWIH-SYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS- 312
Query: 597 ARVYGPLLSACKMHSDPRLA 616
+ + L+S H R A
Sbjct: 313 VQAWTALISGYAYHGHGREA 332
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 163/545 (29%), Positives = 279/545 (51%), Gaps = 27/545 (4%)
Query: 156 DAFDLVRNSLVELYEK--------NGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEE 207
+ F+ V + V LY K N ++A + M V ++ WN+MIS E G M
Sbjct: 56 EVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNT 115
Query: 208 CFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLS 267
+LF M + ++ + V RS K+ QA + + +++
Sbjct: 116 AVKLFDEMPERSVVSWTAMVNGCFRSG------KVDQA--ERLFYQMPVKDTAAWNSMVH 167
Query: 268 MYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLEL----VYCMVRSGVRP 323
Y++ G + DA +F++MP +++ W M+ N E+L+L + C ++S RP
Sbjct: 168 GYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRP 227
Query: 324 DMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIF 383
FT + I++ G Q+H +I+ G Y+ V +LI Y+ C + +R++F
Sbjct: 228 --FTCV--ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVF 283
Query: 384 DLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALH 443
D + V W+A++ ++++ + +ALS+F M + + L + + +G L
Sbjct: 284 DEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLD 343
Query: 444 YVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISA 503
+ + +HG SL+ Y+ G + A +F K K I++WNS+I
Sbjct: 344 WGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFI--KIFKKSIVSWNSIIVG 401
Query: 504 YSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQP 563
++HG F ++ QM N +PD++TF GLL+AC + G ++KG+++F M +
Sbjct: 402 CAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHID 461
Query: 564 SQ-EHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQK 622
+ +H+ CMVD+LGR G++ EA ++IE + + + V+ LLSAC+MHSD E AA
Sbjct: 462 RKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAA 521
Query: 623 LINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRV 682
+ N++ K++ YVLLSNIYA+AG+W V+K+R ++ G+ K PG SW+ G+ HEF
Sbjct: 522 IFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFS 581
Query: 683 ADQSH 687
DQ H
Sbjct: 582 GDQPH 586
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 169/379 (44%), Gaps = 6/379 (1%)
Query: 31 SSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDS 90
+++++ C + + Q F+ + ++ +S ++ Y +FG + K+F +
Sbjct: 132 TAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNS-MVHGYLQFGKVDDALKLFKQMPGKNV 190
Query: 91 VIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSV-SHEQGKMVHAQ 149
+ ++ ++ L Q + L L+K M+ + + V+ +C + + G VH
Sbjct: 191 ISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGL 250
Query: 150 IVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTE-LAYWNNMISQAFESGKMEEC 208
I+KLG + V SL+ Y + + V E +A W ++S + K E+
Sbjct: 251 IIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDA 310
Query: 209 FQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSM 268
+FS M + +I PN T + L S L L G+ +H + + L + V +L+ M
Sbjct: 311 LSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVM 370
Query: 269 YVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTA 328
Y G++ DA +F K+ + +V WN ++ A +G K + + M+R PD T
Sbjct: 371 YSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITF 430
Query: 329 IPAISSITQLKHTEWGKQMHAHVIR--NGSDYQVSVHNALIDMYSACNGLNSARRIFD-L 385
+S+ + E G+++ ++ N D ++ + ++D+ C L A + + +
Sbjct: 431 TGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERM 490
Query: 386 ITDKTVVSWSAMIKAHAVH 404
+ + W A++ A +H
Sbjct: 491 VVKPNEMVWLALLSACRMH 509
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 160/503 (31%), Positives = 264/503 (52%), Gaps = 30/503 (5%)
Query: 193 NNMISQAFESGKMEECFQLFSRMRKEN-IQPNSITVINLLRSTVDLHLLKIGQALHSLII 251
N +I++ SG ++ ++F MR +N I NS+ L+ I + ++
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSL-------------LIGISKDPSRMME 111
Query: 252 VSNLCGELTVNTA-----LLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCP 306
L E+ +LS YV+ + + A+ F++MP D WN M++ YA G
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEM 171
Query: 307 KESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNAL 366
+++ EL Y M+ + + IS + E +H + V A+
Sbjct: 172 EKARELFYSMMEK----NEVSWNAMISGYIECGDLE----KASHFFKVAPVRGVVAWTAM 223
Query: 367 IDMYSACNGLNSARRIF-DLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVD 425
I Y + A +F D+ +K +V+W+AMI + + + + L LF M G R +
Sbjct: 224 ITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPN 283
Query: 426 FIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFD 485
+ + L +++ AL R +H TSL++ Y KCG + A KLF+
Sbjct: 284 SSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFE 343
Query: 486 EGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLV 545
K KD++AWN+MIS Y++HG + L+ +M + ++PD +TF+ +L AC ++GLV
Sbjct: 344 VMKK--KDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLV 401
Query: 546 DKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLS 605
+ G F+ MV Y +P +H+ CMVDLLGRAG+++EA K+I ++P A V+G LL
Sbjct: 402 NIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLG 461
Query: 606 ACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKT 665
AC++H + LAE AA+KL+ + +NA YV L+NIYA+ +W+ VA++R +++ + K
Sbjct: 462 ACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKV 521
Query: 666 PGCSWLESNGQVHEFRVADQSHP 688
PG SW+E +VH FR +D+ HP
Sbjct: 522 PGYSWIEIRNKVHHFRSSDRIHP 544
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 167/367 (45%), Gaps = 33/367 (8%)
Query: 30 TSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLM-DCYTKFGLPGLSQKVFYFTENP 88
S L+ + P + + H F + + + S +M CY + +Q F
Sbjct: 96 NSLLIGISKDPSRMMEAHQLF--DEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK 153
Query: 89 DSVIYSAILRNLSQFGEHEKTLFLYKEMVEK------SMYPDEESCSFVLRSC--FSVSH 140
D+ ++ ++ ++ GE EK L+ M+EK +M C + ++ F V+
Sbjct: 154 DAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAP 213
Query: 141 EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTE-LAYWNNMISQA 199
+G + ++ M A VEL A + M+V + L WN MIS
Sbjct: 214 VRGVVAWTAMITGYMKA------KKVEL--------AEAMFKDMTVNKNLVTWNAMISGY 259
Query: 200 FESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGEL 259
E+ + E+ +LF M +E I+PNS + + L +L L++G+ +H ++ S LC ++
Sbjct: 260 VENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDV 319
Query: 260 TVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRS 319
T T+L+SMY K G L DA +FE M + D+V WN M+S YA +G ++L L M+ +
Sbjct: 320 TALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDN 379
Query: 320 GVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSV----HNALIDMYSACNG 375
+RPD T + + + G ++R DY+V + ++D+
Sbjct: 380 KIRPDWITFVAVLLACNHAGLVNIGMAYFESMVR---DYKVEPQPDHYTCMVDLLGRAGK 436
Query: 376 LNSARRI 382
L A ++
Sbjct: 437 LEEALKL 443
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/468 (29%), Positives = 251/468 (53%), Gaps = 50/468 (10%)
Query: 278 ARLMFEKMPRNDLVVWNIMVSAYAGNGCPKE--SLELVYCMVRSG-VRPDMFTAIPAISS 334
A +F +MP+ + WN ++ ++ + K ++ L Y M+ V P+ FT + +
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 335 ITQLKHTEWGKQMHAHVIRNG--------------------------------------- 355
+ + GKQ+H ++ G
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 356 ------SDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLE 409
D ++ + N +ID Y +AR +FD + ++VVSW+ MI ++++ +
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 410 ALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLA 469
A+ +F EMK R +++ ++++LP +++G+L +LH Y ++L+
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 470 SYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQ 529
Y+KCG IE A +F+ + +++I W++MI+ ++ HG+ + + +M+ + V+P
Sbjct: 318 MYSKCGIIEKAIHVFE--RLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSD 375
Query: 530 VTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIE 589
V ++ LLTAC + GLV++G+ F +MV + G +P EH+ CMVDLLGR+G +DEA + I
Sbjct: 376 VAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFIL 435
Query: 590 TVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDK 649
+P+ D ++ LL AC+M + + + A L++M P ++G YV LSN+YA+ G W +
Sbjct: 436 NMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSE 495
Query: 650 VAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
V++MR ++++ ++K PGCS ++ +G +HEF V D SHP++ +I S+L
Sbjct: 496 VSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSML 543
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 169/371 (45%), Gaps = 51/371 (13%)
Query: 201 ESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQAL-HSLIIVSNLC--- 256
++GK++E Q+ K + + NL+R V +K + L + II ++
Sbjct: 140 KTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMT 199
Query: 257 ------GELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESL 310
GE+ + ++ Y++LG K AR++F+KM + +V WN M+S Y+ NG K+++
Sbjct: 200 DRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAV 259
Query: 311 ELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMY 370
E+ M + +RP+ T + + +I++L E G+ +H + +G + +ALIDMY
Sbjct: 260 EVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMY 319
Query: 371 SACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVI 430
S C + A +F+ + + V++WSAMI A+H Q +A+ F +M+ G R + I
Sbjct: 320 SKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYI 379
Query: 431 NILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSS 490
N+L + HG G +E R+ F + S
Sbjct: 380 NLLTACS-----------HG------------------------GLVEEGRRYFSQMVSV 404
Query: 491 ---HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDK 547
I + M+ + G + E M +KPD V + LL AC G V+
Sbjct: 405 DGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP---IKPDDVIWKALLGACRMQGNVEM 461
Query: 548 GKEIFKEMVDL 558
GK + ++D+
Sbjct: 462 GKRVANILMDM 472
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 188/421 (44%), Gaps = 58/421 (13%)
Query: 37 CTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLP----GLSQKVFYFTENPDSVI 92
C + L QIHA F G +++ +++++ L + K+F +
Sbjct: 33 CRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFS 92
Query: 93 YSAILRNLSQFGEHEK----TLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVH 147
++ I+R S+ E + TLF Y+ M ++ + P+ + VL++C ++GK +H
Sbjct: 93 WNTIIRGFSESDEDKALIAITLF-YEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIH 151
Query: 148 AQIVKLGMDAFDLVRNSLVELYEKNGFLN------------------------------- 176
+K G + V ++LV +Y GF+
Sbjct: 152 GLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLW 211
Query: 177 ---------------AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQ 221
A + M + WN MIS +G ++ ++F M+K +I+
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIR 271
Query: 222 PNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLM 281
PN +T++++L + L L++G+ LH S + + + +AL+ MY K G ++ A +
Sbjct: 272 PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHV 331
Query: 282 FEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHT 341
FE++PR +++ W+ M++ +A +G ++++ M ++GVRP I +++ +
Sbjct: 332 FERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLV 391
Query: 342 EWGKQMHAHVIR-NGSDYQVSVHNALIDMYSACNGLNSARR-IFDLITDKTVVSWSAMIK 399
E G++ + ++ +G + ++ + ++D+ L+ A I ++ V W A++
Sbjct: 392 EEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLG 451
Query: 400 A 400
A
Sbjct: 452 A 452
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 129/305 (42%), Gaps = 67/305 (21%)
Query: 346 QMHAHVIRNGSDYQVSVHNALIDMYSACNGL-----NSARRIFDLITDKTVVSWSAMIK- 399
Q+HA I++G + ++ A I + A + L + A +IF+ + + SW+ +I+
Sbjct: 41 QIHAVFIKSGQ-MRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRG 99
Query: 400 -AHAVHDQCLEALSLFIEMK----LCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXX 454
+ + D+ L A++LF EM + R F ++L AK G + + +HG
Sbjct: 100 FSESDEDKALIAITLFYEMMSDEFVEPNRFTFP---SVLKACAKTGKIQEGKQIHGLALK 156
Query: 455 XXXXXXXXXETSLLASYAKCGCIEMARKLFDEG--------------------------- 487
++L+ Y CG ++ AR LF +
Sbjct: 157 YGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMID 216
Query: 488 ----------------KSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVT 531
K + +++WN+MIS YS +G + E++ +MK +++P+ VT
Sbjct: 217 GYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVT 276
Query: 532 FLGLLTACVNSGLVDKGKEIFKEMVDLY----GYQPSQEHHACMVDLLGRAGQIDEASKI 587
+ +L A G ++ G E + LY G + + ++D+ + G I++A +
Sbjct: 277 LVSVLPAISRLGSLELG-----EWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHV 331
Query: 588 IETVP 592
E +P
Sbjct: 332 FERLP 336
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/520 (30%), Positives = 253/520 (48%), Gaps = 39/520 (7%)
Query: 193 NNMISQAFESGKMEECFQLFSRMRKEN-IQPNSITVINLLRSTVDLHLLKIGQALHSLII 251
N+MI E+ + + F L+ +RKE P++ T L +S + G LHS I
Sbjct: 46 NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIW 105
Query: 252 VSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNG------- 304
C ++ V+T ++ MY K G + AR F++MP V W ++S Y G
Sbjct: 106 RFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASK 165
Query: 305 ----CPKESLELVYCMVRSGV--RPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDY 358
P ++Y + G DM +A +T W +H
Sbjct: 166 LFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHG--------- 216
Query: 359 QVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMK 418
Y +++AR++FD + ++ +VSW+ MI + + Q E + LF EM+
Sbjct: 217 -----------YCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQ 265
Query: 419 LCGT-RVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCI 477
+ D + ++++LP + GAL + H + T++L Y+KCG I
Sbjct: 266 ATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEI 325
Query: 478 EMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLT 537
E A+++FDE K + +WN+MI Y+ +G +L+ M + KPD++T L ++T
Sbjct: 326 EKAKRIFDE--MPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVIT 382
Query: 538 ACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDA 597
AC + GLV++G++ F M ++ G EH+ CMVDLLGRAG + EA +I +P +
Sbjct: 383 ACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNG 441
Query: 598 RVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFL 657
+ LSAC + D AE +K + +EP+N GNYVLL N+YAA +WD +++ +
Sbjct: 442 IILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVM 501
Query: 658 RDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
R KK GCS +E N V EF D +HP I+ +L
Sbjct: 502 RKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVL 541
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 122/520 (23%), Positives = 225/520 (43%), Gaps = 67/520 (12%)
Query: 53 HGLHQNSSLSSKLMDCYTKFGLPGLSQKVF-YFTENPDSVIYSAILRNLSQFGEHEKTLF 111
H + N + +K + G ++K+F + DS + +++++ + ++ +
Sbjct: 4 HAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFA 63
Query: 112 LYKEMVEKSMY-PDEESCSFVLRSC-FSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELY 169
LY+++ +++ + PD + + + +SC S+ QG +H+QI + G A V +V++Y
Sbjct: 64 LYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMY 123
Query: 170 EKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVI 228
K G + A + M W +IS G+++ +LF +M P+ V+
Sbjct: 124 AKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM------PHVKDVV 177
Query: 229 NLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN-TALLSMYVKLGSLKDARLMFEKMPR 287
+ + +D +K G + + + + + T ++ Y + + AR +F+ MP
Sbjct: 178 -IYNAMMD-GFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPE 235
Query: 288 NDLVVWNIMVSAYAGNGCPKESLELVYCM-VRSGVRPD---MFTAIPAISSITQLKHTEW 343
+LV WN M+ Y N P+E + L M + + PD + + +PAIS L EW
Sbjct: 236 RNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEW 295
Query: 344 GKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAV 403
H V R D +V V A++DMYS C + A+RIFD + +K V SW+AMI +A+
Sbjct: 296 ---CHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYAL 352
Query: 404 HDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXX 463
+ AL LF+ M +I P
Sbjct: 353 NGNARAALDLFVTM-----------MIEEKPD---------------------------- 373
Query: 464 ETSLLASYAKC---GCIEMARKLFDEGKSS--HKDIIAWNSMISAYSKHGEWFQCFELYN 518
E ++LA C G +E RK F + + I + M+ + G + +L
Sbjct: 374 EITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLIT 433
Query: 519 QMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDL 558
M +P+ + L+AC +++ + I K+ V+L
Sbjct: 434 NMPF---EPNGIILSSFLSACGQYKDIERAERILKKAVEL 470
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 172/641 (26%), Positives = 308/641 (48%), Gaps = 83/641 (12%)
Query: 138 VSHEQGKMVHAQIV--KLGMDAFDLVRNSLVELYEKNGFL----NAHEPLEGMSVTELAY 191
++ +Q + VHAQ++ + L N L+ +Y + G L N E + + +++L
Sbjct: 67 LTAQQCRQVHAQVLLSDFIFRSGSLAAN-LISVYARLGLLLDARNVFETVSLVLLSDLRL 125
Query: 192 WNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLII 251
WN+++ G E +L+ MR+ + + + +LR+ L + +A H+ +I
Sbjct: 126 WNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVI 185
Query: 252 VSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLE 311
L L V LL++Y K G + DA +F +MP + + WN+M+ ++ + +++
Sbjct: 186 QIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVK 245
Query: 312 LVYCMVRSGVRPDMFTAIPAISSITQ---------------------------------- 337
+ M R +PD T +S +Q
Sbjct: 246 IFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCA 305
Query: 338 -LKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSA 396
L+ +++H +VI+ G + + NALI +Y + A +F I +K + SW++
Sbjct: 306 ELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNS 365
Query: 397 MIKAHAVHDQCLEALSLFIEMK----LCGTRVDFII------------------------ 428
+I + + EALSLF E++ +C + + +
Sbjct: 366 LITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
Query: 429 -----------VINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCI 477
+ IL A++ AL+ R +HG+ + +L+ YAKCG +
Sbjct: 426 QFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLL 485
Query: 478 EMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLT 537
+F+ + KD+I+WNS+I Y HG + ++++M S PD + + +L+
Sbjct: 486 SEGSLVFEAIRD--KDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLS 543
Query: 538 ACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDA 597
AC ++GLV+KG+EIF M +G +P QEH+AC+VDLLGR G + EAS+I++ +P+
Sbjct: 544 ACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKV 603
Query: 598 RVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFL 657
V G LL++C+MH + +AE A +L +EP+ G+Y+LLSNIY+A G+W++ A +R+
Sbjct: 604 CVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALA 663
Query: 658 RDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILK 698
+ + LKK G SW+E + ++F IY +L+
Sbjct: 664 KKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLE 704
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/503 (23%), Positives = 212/503 (42%), Gaps = 80/503 (15%)
Query: 24 QTRFFTTSSLLDLCTKPQHLQQIHARFFLHG-LHQNSSLSSKLMDCYTKFGLPGLSQKVF 82
Q+ F LL LC Q +Q+HA+ L + ++ SL++ L+ Y + GL ++ VF
Sbjct: 53 QSLFHYFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVF 112
Query: 83 YFTEN---PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVS 139
D ++++IL+ G +E L LY+ M ++ + D +LR+C +
Sbjct: 113 ETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLG 172
Query: 140 H-EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMIS 197
+ H Q++++G+ V N L+ LY K G + +A+ M V WN MI
Sbjct: 173 RFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIK 232
Query: 198 QAFESGKMEECFQLFSRMRKENIQPNSITVINLLRS------------------------ 233
+ E ++F M++E +P+ +T ++L
Sbjct: 233 GFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAV 292
Query: 234 -----------TVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMF 282
+L L I + +H +I L AL+ +Y K G +KDA +F
Sbjct: 293 SGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLF 352
Query: 283 EKMPRNDLVVWNIMVSAYAGNGCPKESLELV--------YCMVRSGV------------- 321
++ + WN +++++ G E+L L C V++ V
Sbjct: 353 RQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQ 412
Query: 322 ----------RPDMFTAIPA--------ISSITQLKHTEWGKQMHAHVIRNGSDYQVSVH 363
R F+ + A +S +L G+++H HVIR + V
Sbjct: 413 GRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQ 472
Query: 364 NALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTR 423
NAL++MY+ C L+ +F+ I DK ++SW+++IK + +H +ALS+F M G
Sbjct: 473 NALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFH 532
Query: 424 VDFIIVINILPTFAKIGALHYVR 446
D I ++ +L + G + R
Sbjct: 533 PDGIALVAVLSACSHAGLVEKGR 555
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 147/483 (30%), Positives = 248/483 (51%), Gaps = 3/483 (0%)
Query: 204 KMEECFQLFSRMR-KENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN 262
+ E F+LF + + + + T L+ + + L ++ + ++ ++ + E +
Sbjct: 102 RFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMM 161
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
+L M+VK G + DAR +F+++P +L + ++S + G E+ EL M
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 323 PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRI 382
+ T + + L GKQ+H ++ G V LIDMYS C + AR
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 383 FDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGAL 442
F+ + +KT V+W+ +I +A+H EAL L +M+ G +D + ++ K+ L
Sbjct: 282 FECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKL 341
Query: 443 HYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMIS 502
+ H T+L+ Y+K G ++ AR +FD K K+II+WN+++
Sbjct: 342 ELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFD--KLPRKNIISWNALMG 399
Query: 503 AYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQ 562
Y+ HG +L+ +M +NV P+ VTFL +L+AC SGL ++G EIF M +++G +
Sbjct: 400 GYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIK 459
Query: 563 PSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQK 622
P H+ACM++LLGR G +DEA I PL + ++ LL+AC+M + L V A+K
Sbjct: 460 PRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEK 519
Query: 623 LINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRV 682
L M P+ GNYV++ N+Y + GK + A + L +GL P C+W+E Q H F
Sbjct: 520 LYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLS 579
Query: 683 ADQ 685
D+
Sbjct: 580 GDR 582
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 152/298 (51%), Gaps = 1/298 (0%)
Query: 144 KMVHAQIVKLGMDAFDLVRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFES 202
K V+ ++ G + + N ++ ++ K G ++A + + L + ++IS
Sbjct: 143 KRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNF 202
Query: 203 GKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN 262
G E F+LF M +E + T +LR++ L + +G+ LH + + V+
Sbjct: 203 GNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVS 262
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
L+ MY K G ++DAR FE MP V WN +++ YA +G +E+L L+Y M SGV
Sbjct: 263 CGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVS 322
Query: 323 PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRI 382
D FT I T+L E KQ HA +IRNG + ++ + AL+D YS +++AR +
Sbjct: 323 IDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYV 382
Query: 383 FDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIG 440
FD + K ++SW+A++ +A H + +A+ LF +M + + + +L A G
Sbjct: 383 FDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSG 440
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 169/348 (48%), Gaps = 15/348 (4%)
Query: 7 LFHLLNIRKIPYIVAPFQTRFFTTSSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSS 63
LF +L IR F+ T +L++ C + + + ++++ +G + +
Sbjct: 109 LFEILEIR------CSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMN 162
Query: 64 KLMDCYTKFGLPGLSQKVFYFTENPDSVIYS--AILRNLSQFGEHEKTLFLYKEMVEKSM 121
+++ + K G+ ++++F E P+ +YS +I+ FG + + L+K M E+
Sbjct: 163 RILLMHVKCGMIIDARRLF--DEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELS 220
Query: 122 YPDEESCSFVLRSCFSV-SHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHE 179
+ + + +LR+ + S GK +H +KLG+ V L+++Y K G + +A
Sbjct: 221 DCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARC 280
Query: 180 PLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHL 239
E M WNN+I+ G EE L MR + + T+ ++R + L
Sbjct: 281 AFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAK 340
Query: 240 LKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSA 299
L++ + H+ +I + E+ NTAL+ Y K G + AR +F+K+PR +++ WN ++
Sbjct: 341 LELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGG 400
Query: 300 YAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQM 347
YA +G ++++L M+ + V P+ T + +S+ +E G ++
Sbjct: 401 YANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEI 448
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 259 bits (661), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 136/409 (33%), Positives = 229/409 (55%), Gaps = 3/409 (0%)
Query: 293 WNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVI 352
+N M+ Y +E+L M++ G PD FT + + T+LK GKQ+H V
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 353 RNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALS 412
+ G + V V N+LI+MY C + + +F+ + KT SWS+M+ A A E L
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 413 LFIEM-KLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASY 471
LF M + + +++ L A GAL+ +HG+ +TSL+ Y
Sbjct: 220 LFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMY 279
Query: 472 AKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVT 531
KCGC++ A +F K ++ + +++MIS + HGE ++++M ++PD V
Sbjct: 280 VKCGCLDKALHIFQ--KMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVV 337
Query: 532 FLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETV 591
++ +L AC +SGLV +G+ +F EM+ +P+ EH+ C+VDLLGRAG ++EA + I+++
Sbjct: 338 YVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSI 397
Query: 592 PLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVA 651
P+ + ++ LS C++ + L ++AAQ+L+ + N G+Y+L+SN+Y+ WD VA
Sbjct: 398 PIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVA 457
Query: 652 KMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILKVM 700
+ R+ + +GLK+TPG S +E G+ H F D+SHP+ +IY +L M
Sbjct: 458 RTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQM 506
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 181/377 (48%), Gaps = 13/377 (3%)
Query: 33 LLDLCTKPQHLQQIHARFFLHGLHQNSSLSSK--LMDCYTKFGLPGL--SQKVFYFTENP 88
LL C +Q+HARF L +SS S+ L C + + +F ++P
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDP 95
Query: 89 DSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSV-SHEQGKMVH 147
+ ++ ++R E+ L Y EM+++ PD + +L++C + S +GK +H
Sbjct: 96 CTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIH 155
Query: 148 AQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKME 206
Q+ KLG++A V+NSL+ +Y + G + + E + A W++M+S G
Sbjct: 156 GQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWS 215
Query: 207 ECFQLFSRMRKE-NIQPNSITVINLLRSTVDLHLLKIGQALHSLII--VSNLCGELTVNT 263
EC LF M E N++ +++ L + + L +G ++H ++ +S L + V T
Sbjct: 216 ECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISEL--NIIVQT 273
Query: 264 ALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRP 323
+L+ MYVK G L A +F+KM + + + ++ M+S A +G + +L + M++ G+ P
Sbjct: 274 SLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEP 333
Query: 324 DMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVH-NALIDMYSACNGLNSA-RR 381
D + +++ + + G+++ A +++ G + H L+D+ L A
Sbjct: 334 DHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALET 393
Query: 382 IFDLITDKTVVSWSAMI 398
I + +K V W +
Sbjct: 394 IQSIPIEKNDVIWRTFL 410
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 118/262 (45%), Gaps = 15/262 (5%)
Query: 374 NGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINIL 433
N +N A IF I D ++ MI+ + EAL + EM G D +L
Sbjct: 80 NSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLL 139
Query: 434 PTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKD 493
++ ++ + +HG + SL+ Y +CG +E++ +F++ +S K
Sbjct: 140 KACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLES--KT 197
Query: 494 IIAWNSMISAYSKHGEWFQCFELYNQM-KLSNVKPDQVTFLGLLTACVNSGLVDKGKEI- 551
+W+SM+SA + G W +C L+ M +N+K ++ + L AC N+G ++ G I
Sbjct: 198 AASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIH 257
Query: 552 ---FKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACK 608
+ + +L + +VD+ + G +D+A I + + ++ Y ++S
Sbjct: 258 GFLLRNISELNIIVQTS-----LVDMYVKCGCLDKALHIFQKMEKRNNL-TYSAMISGLA 311
Query: 609 MHSDPRLAEVAAQKLI--NMEP 628
+H + A K+I +EP
Sbjct: 312 LHGEGESALRMFSKMIKEGLEP 333
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 258 bits (660), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 148/466 (31%), Positives = 240/466 (51%), Gaps = 34/466 (7%)
Query: 265 LLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPD 324
++S YVK G L AR++F+ MP D+V WN MV YA +G E+L RSG++ +
Sbjct: 119 MVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFN 178
Query: 325 MFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFD 384
F+ +++ + + + +Q H V+ G V + ++ID Y+ C + SA+R FD
Sbjct: 179 EFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFD 238
Query: 385 LIT-------------------------------DKTVVSWSAMIKAHAVHDQCLEALSL 413
+T +K VSW+A+I + AL L
Sbjct: 239 EMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDL 298
Query: 414 FIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAK 473
F +M G + + + L A I +L + + +HGY +SL+ Y+K
Sbjct: 299 FRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSK 358
Query: 474 CGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFL 533
G +E + ++F H D + WN+MISA ++HG + + + M V+P++ T +
Sbjct: 359 SGSLEASERVFRICDDKH-DCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLV 417
Query: 534 GLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPL 593
+L AC +SGLV++G F+ M +G P QEH+AC++DLLGRAG E + IE +P
Sbjct: 418 VILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPF 477
Query: 594 NSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKM 653
D ++ +L C++H + L + AA +LI ++P+++ Y+LLS+IYA GKW+ V K+
Sbjct: 478 EPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKL 537
Query: 654 RSFLRDRGLKKTPGCSWLESNGQVHEFRVADQS--HPRSVDIYSIL 697
R ++ R + K SW+E +V F V+D S H R +IY IL
Sbjct: 538 RGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFIL 583
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 132/314 (42%), Gaps = 47/314 (14%)
Query: 28 FTTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVF-- 82
F+ + LL C K + LQ Q H + + G N LS ++D Y K G +++ F
Sbjct: 180 FSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDE 239
Query: 83 ---------------------------YFTENPDS--VIYSAILRNLSQFGEHEKTLFLY 113
F E P+ V ++A++ + G + L L+
Sbjct: 240 MTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLF 299
Query: 114 KEMVEKSMYPDEESCSFVLRSCFSVSH-----EQGKMVHAQIVKLGMDAFDLVRNSLVEL 168
++M+ + P++ F SC S GK +H +++ + +V +SL+++
Sbjct: 300 RKMIALGVKPEQ----FTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDM 355
Query: 169 YEKNGFLNAHEPLEGM--SVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSIT 226
Y K+G L A E + + + +WN MIS + G + ++ M K +QPN T
Sbjct: 356 YSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTT 415
Query: 227 VINLLRSTVDLHLLKIG-QALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKM 285
++ +L + L++ G + S+ + + + L+ + + G K+ E+M
Sbjct: 416 LVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEM 475
Query: 286 P-RNDLVVWNIMVS 298
P D +WN ++
Sbjct: 476 PFEPDKHIWNAILG 489
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/438 (33%), Positives = 242/438 (55%), Gaps = 11/438 (2%)
Query: 229 NLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRN 288
+LL + L + G +H LI L L +++ L+ +Y G + A +F++M +
Sbjct: 97 SLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKR 156
Query: 289 DL--VVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQ 346
D WN ++S YA G ++++ L + M GV+PD FT + + + + G+
Sbjct: 157 DSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEA 216
Query: 347 MHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQ 406
+H +++ G Y V V NAL+ MY+ C + AR +FD+I K VSW++M+ + H
Sbjct: 217 IHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGL 276
Query: 407 CLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETS 466
EAL +F M G D + + ++L A++ + + R LHG+ +
Sbjct: 277 LHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANA 333
Query: 467 LLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVK 526
L+ Y+K G + A +FD+ +D ++WN++ISA+SK+ + FE QM +N K
Sbjct: 334 LIVLYSKRGQLGQACFIFDQ--MLERDTVSWNAIISAHSKNSNGLKYFE---QMHRANAK 388
Query: 527 PDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEA-S 585
PD +TF+ +L+ C N+G+V+ G+ +F M YG P EH+ACMV+L GRAG ++EA S
Sbjct: 389 PDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYS 448
Query: 586 KIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAG 645
I++ + L + V+G LL AC +H + + EVAAQ+L +EP N N+ LL IY+ A
Sbjct: 449 MIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAK 508
Query: 646 KWDKVAKMRSFLRDRGLK 663
+ + V ++R + DRGL+
Sbjct: 509 RAEDVERVRQMMVDRGLE 526
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 187/383 (48%), Gaps = 11/383 (2%)
Query: 131 VLRSCFSV-SHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTE 188
+L +C+S+ + + G VH I + + + LV LY G+ AHE + MS +
Sbjct: 98 LLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRD 157
Query: 189 LA--YWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQAL 246
+ WN++IS E G+ E+ L+ +M ++ ++P+ T +L++ + ++IG+A+
Sbjct: 158 SSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAI 217
Query: 247 HSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCP 306
H ++ ++ V AL+ MY K G + AR +F+ +P D V WN M++ Y +G
Sbjct: 218 HRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLL 277
Query: 307 KESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNAL 366
E+L++ MV++G+ PD ++ + KH G+Q+H VIR G ++++SV NAL
Sbjct: 278 HEALDIFRLMVQNGIEPDKVAISSVLARVLSFKH---GRQLHGWVIRRGMEWELSVANAL 334
Query: 367 IDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDF 426
I +YS L A IFD + ++ VSW+A+I AH+ + L F +M + D
Sbjct: 335 IVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN---GLKYFEQMHRANAKPDG 391
Query: 427 IIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLAS-YAKCGCIEMARKLFD 485
I +++L A G + L + + + Y + G +E A +
Sbjct: 392 ITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIV 451
Query: 486 EGKSSHKDIIAWNSMISAYSKHG 508
+ W +++ A HG
Sbjct: 452 QEMGLEAGPTVWGALLYACYLHG 474
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 182/384 (47%), Gaps = 16/384 (4%)
Query: 31 SSLLDLCTKPQ---HLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTEN 87
+SLL+ C + H ++H + L N +SSKL+ Y G ++ +VF
Sbjct: 96 ASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSK 155
Query: 88 PDS--VIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GK 144
DS +++++ ++ G++E + LY +M E + PD + VL++C + Q G+
Sbjct: 156 RDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGE 215
Query: 145 MVHAQIVKLGMDAFDLVRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFESG 203
+H +VK G V N+LV +Y K G + A + + + WN+M++ G
Sbjct: 216 AIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHG 275
Query: 204 KMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNT 263
+ E +F M + I+P+ + + ++L + K G+ LH +I + EL+V
Sbjct: 276 LLHEALDIFRLMVQNGIEPDKVAISSVLARVLS---FKHGRQLHGWVIRRGMEWELSVAN 332
Query: 264 ALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRP 323
AL+ +Y K G L A +F++M D V WN ++SA++ N L+ M R+ +P
Sbjct: 333 ALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKN---SNGLKYFEQMHRANAKP 389
Query: 324 DMFTAIPAISSITQLKHTEWGKQMHAHVIRN-GSDYQVSVHNALIDMYSACNGLNSARRI 382
D T + +S E G+++ + + + G D ++ + ++++Y + A +
Sbjct: 390 DGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSM 449
Query: 383 F--DLITDKTVVSWSAMIKAHAVH 404
++ + W A++ A +H
Sbjct: 450 IVQEMGLEAGPTVWGALLYACYLH 473
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 8/202 (3%)
Query: 397 MIKAHAVHDQCLEAL-SLFIEMKLCGTR----VDFIIVINILPTFAKIGALHYVRYLHGY 451
+I+ ++H LEAL S+ +++ + + I ++L T + A+ + +H
Sbjct: 58 LIEKQSIHRTQLEALDSVITDLETSAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHL 117
Query: 452 XXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWF 511
+ L+ YA CG E+A ++FD AWNS+IS Y++ G++
Sbjct: 118 IPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYE 177
Query: 512 QCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMV-DLYGYQPSQEHHAC 570
LY QM VKPD+ TF +L AC G V G+ I +++V + +GY +
Sbjct: 178 DAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLN--A 235
Query: 571 MVDLLGRAGQIDEASKIIETVP 592
+V + + G I +A + + +P
Sbjct: 236 LVVMYAKCGDIVKARNVFDMIP 257
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 173/598 (28%), Positives = 293/598 (48%), Gaps = 25/598 (4%)
Query: 86 ENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKM 145
E D I++A++ + G HE ++ L++EM + + D+ + +L C S + GK
Sbjct: 151 ERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQ 210
Query: 146 VHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSV---TELAYWN----NMISQ 198
VH+ ++K G V N+L+ +Y N ++ V T++A + N++
Sbjct: 211 VHSLVIKAGFFIASSVVNALITMY-----FNCQVVVDACLVFEETDVAVRDQVTFNVVID 265
Query: 199 AFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGE 258
K +E +F +M + +++P +T ++++ S +G +H L I +
Sbjct: 266 GLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSC---SCAAMGHQVHGLAIKTGYEKY 322
Query: 259 LTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVR 318
V+ A ++MY A +FE + DLV WN M+S+Y K ++ + M
Sbjct: 323 TLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHI 382
Query: 319 SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNS 378
GV+PD FT +++ L E + A +I+ G ++ + NALI YS +
Sbjct: 383 IGVKPDEFTFGSLLATSLDLDVLE---MVQACIIKFGLSSKIEISNALISAYSKNGQIEK 439
Query: 379 ARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRV--DFIIVINILPTF 436
A +F+ K ++SW+A+I + E L F + R+ D + +L
Sbjct: 440 ADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSIC 499
Query: 437 AKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIA 496
+L H Y +L+ Y++CG I+ + ++F++ S KD+++
Sbjct: 500 VSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQ--MSEKDVVS 557
Query: 497 WNSMISAYSKHGEWFQCFELYNQMK-LSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEM 555
WNS+ISAYS+HGE Y M+ V PD TF +L+AC ++GLV++G EIF M
Sbjct: 558 WNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSM 617
Query: 556 VDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETV--PLNSDARVYGPLLSACKMHSDP 613
V+ +G + +H +C+VDLLGRAG +DEA +++ + S V+ L SAC H D
Sbjct: 618 VEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDL 677
Query: 614 RLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWL 671
+L ++ A+ L+ E + YV LSNIYA AG W + + R + G K GCSW+
Sbjct: 678 KLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWM 735
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 141/586 (24%), Positives = 261/586 (44%), Gaps = 52/586 (8%)
Query: 97 LRNLSQFGEHEKTLFLYKEMVE-KSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQIVKLG 154
L L++ GE+ L L+ ++ ++ PD+ S S + + + G VH ++ G
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 155 MDAFDLVRNSLVELYEKNGFLN--------------------------------AHEPLE 182
+ V N+L+ LYE+ G L A E +
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 183 GM-SVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLK 241
M ++A WN MI+ ESG E +LF M K ++ + +L S D L
Sbjct: 148 KMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL-SMCDYGSLD 206
Query: 242 IGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEK--MPRNDLVVWNIMVSA 299
G+ +HSL+I + +V AL++MY + DA L+FE+ + D V +N+++
Sbjct: 207 FGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDG 266
Query: 300 YAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQ 359
AG ESL + M+ + +RP T + + S + G Q+H I+ G +
Sbjct: 267 LAGFK-RDESLLVFRKMLEASLRPTDLTFVSVMGSCSC---AAMGHQVHGLAIKTGYEKY 322
Query: 360 VSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKL 419
V NA + MYS+ +A ++F+ + +K +V+W+ MI ++ A+S++ M +
Sbjct: 323 TLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHI 382
Query: 420 CGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEM 479
G + D ++L T + L V+ +L+++Y+K G IE
Sbjct: 383 IGVKPDEFTFGSLLATSLDLDVLEMVQ---ACIIKFGLSSKIEISNALISAYSKNGQIEK 439
Query: 480 ARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVK--PDQVTFLGLLT 537
A LF+ +S K++I+WN++IS + +G F+ E ++ + S V+ PD T LL+
Sbjct: 440 ADLLFE--RSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLS 497
Query: 538 ACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDA 597
CV++ + G + ++ ++ + +A ++++ + G I + ++ + D
Sbjct: 498 ICVSTSSLMLGSQTHAYVLRHGQFKETLIGNA-LINMYSQCGTIQNSLEVFNQMS-EKDV 555
Query: 598 RVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAA 643
+ L+SA H + A V K + E K + S + +A
Sbjct: 556 VSWNSLISAYSRHGEGENA-VNTYKTMQDEGKVIPDAATFSAVLSA 600
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 192/404 (47%), Gaps = 14/404 (3%)
Query: 10 LLNIRKIPYIVAPFQTRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCY 69
LL RK+ + A + T S++ C+ Q+H G + + +S+ M Y
Sbjct: 276 LLVFRKM--LEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMY 333
Query: 70 TKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCS 129
+ F G + KVF E D V ++ ++ + +Q + + +YK M + PDE +
Sbjct: 334 SSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFG 393
Query: 130 FVLRSCFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTE- 188
+L + S+ + +MV A I+K G+ + + N+L+ Y KNG + + L S+ +
Sbjct: 394 SLLAT--SLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKN 451
Query: 189 LAYWNNMISQAFESGKMEECFQLFSRMRKENIQ--PNSITVINLLRSTVDLHLLKIGQAL 246
L WN +IS + +G E + FS + + ++ P++ T+ LL V L +G
Sbjct: 452 LISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQT 511
Query: 247 HSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCP 306
H+ ++ E + AL++MY + G+++++ +F +M D+V WN ++SAY+ +G
Sbjct: 512 HAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEG 571
Query: 307 KESLELVYCMVRSG-VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIR-NGSDYQVSVHN 364
+ ++ M G V PD T +S+ + E G ++ ++ +G V +
Sbjct: 572 ENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFS 631
Query: 365 ALIDMYSACNGLNSARRIFDLITDKTVVS----WSAMIKAHAVH 404
L+D+ L+ A + I++KT+ S W A+ A A H
Sbjct: 632 CLVDLLGRAGHLDEAESLVK-ISEKTIGSRVDVWWALFSACAAH 674
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 256 bits (653), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 157/514 (30%), Positives = 265/514 (51%), Gaps = 24/514 (4%)
Query: 193 NNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIV 252
N++I ++ + + F +FS M++ + ++ T LL++ L + + +H+ I
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK 145
Query: 253 SNLCGELTVNTALLSMYVKLGSL--KDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESL 310
L ++ V AL+ Y + G L +DA +FEKM D V WN M+ G +++
Sbjct: 146 LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDAR 205
Query: 311 ELVYCMVRSGVRPDMFTAIPA---ISSITQLKHTEWGKQMHA--HVIRNGSDYQVSVHNA 365
L F +P IS T L ++M + + +
Sbjct: 206 RL-------------FDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWST 252
Query: 366 LIDMYSACNGLNSARRIFDL--ITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTR 423
++ YS + AR +FD + K VV+W+ +I +A EA L +M G +
Sbjct: 253 MVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLK 312
Query: 424 VDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKL 483
D VI+IL + G L +H +LL YAKCG ++ A +
Sbjct: 313 FDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDV 372
Query: 484 FDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSG 543
F++ KD+++WN+M+ HG + EL+++M+ ++PD+VTF+ +L +C ++G
Sbjct: 373 FND--IPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAG 430
Query: 544 LVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPL 603
L+D+G + F M +Y P EH+ C+VDLLGR G++ EA K+++T+P+ + ++G L
Sbjct: 431 LIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGAL 490
Query: 604 LSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLK 663
L AC+MH++ +A+ L+ ++P + GNY LLSNIYAAA W+ VA +RS ++ G++
Sbjct: 491 LGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVE 550
Query: 664 KTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
K G S +E +HEF V D+SHP+S IY +L
Sbjct: 551 KPSGASSVELEDGIHEFTVFDKSHPKSDQIYQML 584
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 135/535 (25%), Positives = 246/535 (45%), Gaps = 23/535 (4%)
Query: 25 TRFFTTSSLLDL--CTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVF 82
+R L DL C ++Q+HA+ LH++ ++ KL+ + L+ +VF
Sbjct: 15 SRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVF 74
Query: 83 YFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-E 141
+ P+ + ++++R +Q + + F++ EM ++ D + F+L++C S
Sbjct: 75 NQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLP 134
Query: 142 QGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL---EGMSVTELAYWNNMISQ 198
KM+H I KLG+ + V N+L++ Y + G L + + E MS + WN+M+
Sbjct: 135 VVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGG 194
Query: 199 AFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGE 258
++G++ + +LF M + ++ I+ +L + L + N
Sbjct: 195 LVKAGELRDARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFELFEKMPERN---- 246
Query: 259 LTVNTALLSM-YVKLGSLKDARLMFEKMP--RNDLVVWNIMVSAYAGNGCPKESLELVYC 315
TV+ + + M Y K G ++ AR+MF+KMP ++V W I+++ YA G KE+ LV
Sbjct: 247 -TVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQ 305
Query: 316 MVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNG 375
MV SG++ D I +++ T+ G ++H+ + R+ V NAL+DMY+ C
Sbjct: 306 MVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGN 365
Query: 376 LNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPT 435
L A +F+ I K +VSW+ M+ VH EA+ LF M+ G R D + I +L +
Sbjct: 366 LKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCS 425
Query: 436 FAKIGAL-HYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDI 494
G + + Y + L+ + G ++ A K+ + ++
Sbjct: 426 CNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVV-QTMPMEPNV 484
Query: 495 IAWNSMISAYSKHGEWFQCFE-LYNQMKLSNVKPDQVTFLGLLTACVNS--GLVD 546
+ W +++ A H E E L N +KL P + L + A G+ D
Sbjct: 485 VIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVAD 539
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 255 bits (652), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 143/506 (28%), Positives = 259/506 (51%), Gaps = 11/506 (2%)
Query: 177 AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVD 236
A E + + WN+MI S ++ + M ++ P+ T +L++
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 237 LHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIM 296
L ++ G +H ++ + + V+T LL MY+ G + +FE +P+ ++V W +
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179
Query: 297 VSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGS 356
+S + N +++E M +GV+ + + + + + K GK H + G
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGF 239
Query: 357 D--------YQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCL 408
D + V + +LIDMY+ C L +AR +FD + ++T+VSW+++I ++ +
Sbjct: 240 DPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAE 299
Query: 409 EALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLL 468
EAL +F++M G D + ++++ G + +H Y +L+
Sbjct: 300 EALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALV 359
Query: 469 ASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMK-LSNVKP 527
YAK G E A+K F++ KD IAW +I + HG + ++ +M+ N P
Sbjct: 360 NMYAKTGDAESAKKAFED--LEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATP 417
Query: 528 DQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKI 587
D +T+LG+L AC + GLV++G+ F EM DL+G +P+ EH+ CMVD+L RAG+ +EA ++
Sbjct: 418 DGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERL 477
Query: 588 IETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKW 647
++T+P+ + ++G LL+ C +H + L + + E +G YVLLSNIYA AG+W
Sbjct: 478 VKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRW 537
Query: 648 DKVAKMRSFLRDRGLKKTPGCSWLES 673
V +R ++ + + K G S +E+
Sbjct: 538 ADVKLIRESMKSKRVDKVLGHSSVET 563
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 204/440 (46%), Gaps = 21/440 (4%)
Query: 32 SLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMD-CYTKFGLPGLS--QKVFYFTENP 88
S L+ C L Q+H + +N S+L+D C T LS + VF + P
Sbjct: 11 SQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCP 70
Query: 89 DSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GKMVH 147
I+++++R S +K L Y+EM+ K PD + +VL++C + Q G VH
Sbjct: 71 SVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVH 130
Query: 148 AQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKME 206
+VK G + V L+ +Y G +N E + + W ++IS + +
Sbjct: 131 GFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFS 190
Query: 207 ECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLI--------IVSNLCGE 258
+ + F M+ ++ N +++LL + + G+ H + S +
Sbjct: 191 DAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFN 250
Query: 259 LTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVR 318
+ + T+L+ MY K G L+ AR +F+ MP LV WN +++ Y+ NG +E+L + M+
Sbjct: 251 VILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLD 310
Query: 319 SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNS 378
G+ PD T + I + ++ G+ +HA+V + G ++ AL++MY+ S
Sbjct: 311 LGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAES 370
Query: 379 ARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRV-DFIIVINILPTFA 437
A++ F+ + K ++W+ +I A H EALS+F M+ G D I + +L +
Sbjct: 371 AKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACS 430
Query: 438 KIGALH-------YVRYLHG 450
IG + +R LHG
Sbjct: 431 HIGLVEEGQRYFAEMRDLHG 450
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 255 bits (651), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 149/504 (29%), Positives = 262/504 (51%), Gaps = 40/504 (7%)
Query: 226 TVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKM 285
T+I++LRS ++ + ++H+ II + + V L+ + L S+ A +F +
Sbjct: 31 TLISVLRSCKNIAHVP---SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 286 PRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGK 345
++ ++ M+ + +G + + L + M+ + V PD + I+S+ + + +
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYV----ITSVLKACDLKVCR 143
Query: 346 QMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITD----------------- 388
++HA V++ G SV ++++Y L +A+++FD + D
Sbjct: 144 EIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECG 203
Query: 389 --------------KTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILP 434
K V W+AMI + + +AL LF EM++ + + +L
Sbjct: 204 FIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLS 263
Query: 435 TFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDI 494
+ +GAL R++H + +L+ Y++CG I AR++F + KD+
Sbjct: 264 ACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRD--KDV 321
Query: 495 IAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKE 554
I++N+MIS + HG + + M +P+QVT + LL AC + GL+D G E+F
Sbjct: 322 ISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNS 381
Query: 555 MVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPR 614
M ++ +P EH+ C+VDLLGR G+++EA + IE +P+ D + G LLSACK+H +
Sbjct: 382 MKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNME 441
Query: 615 LAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESN 674
L E A++L E ++G YVLLSN+YA++GKW + ++R +RD G++K PGCS +E +
Sbjct: 442 LGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVD 501
Query: 675 GQVHEFRVADQSHPRSVDIYSILK 698
Q+HEF V D +HP IY L+
Sbjct: 502 NQIHEFLVGDIAHPHKEAIYQRLQ 525
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 175/398 (43%), Gaps = 42/398 (10%)
Query: 25 TRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
+R T S+L C H+ IHA+ Q++ + +L+ + + VF +
Sbjct: 27 SRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSY 86
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSC-FSVSHEQG 143
NP+ +Y+A++ G + LY M+ S+ PD + VL++C V E
Sbjct: 87 VSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCRE-- 144
Query: 144 KMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL---------------------------- 175
+HAQ++KLG + V ++E+Y K+G L
Sbjct: 145 --IHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSEC 202
Query: 176 ----NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLL 231
A E + + + + W MI + +M + +LF M+ EN+ N T + +L
Sbjct: 203 GFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVL 262
Query: 232 RSTVDLHLLKIGQALHSLIIVSNLCGELT--VNTALLSMYVKLGSLKDARLMFEKMPRND 289
+ DL L++G+ +HS V N EL+ V AL++MY + G + +AR +F M D
Sbjct: 263 SACSDLGALELGRWVHSF--VENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKD 320
Query: 290 LVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHA 349
++ +N M+S A +G E++ MV G RP+ T + +++ + + G ++
Sbjct: 321 VISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFN 380
Query: 350 HVIRN-GSDYQVSVHNALIDMYSACNGLNSARRIFDLI 386
+ R + Q+ + ++D+ L A R + I
Sbjct: 381 SMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENI 418
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/496 (21%), Positives = 222/496 (44%), Gaps = 81/496 (16%)
Query: 131 VLRSCFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTEL 189
VLRSC +++H +HA+I++ D V L+ + ++ A++ +S +
Sbjct: 35 VLRSCKNIAHVPS--IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNV 92
Query: 190 AYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSL 249
+ MI SG+ + L+ RM ++ P++ + ++L++ LK+ + +H+
Sbjct: 93 YLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCREIHAQ 148
Query: 250 IIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKES 309
++ +V ++ +Y K G L +A+ MF++MP D V +M++ Y+ G KE+
Sbjct: 149 VLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEA 208
Query: 310 LEL---------------VYCMVRS----------------GVRPDMFTAIPAISSITQL 338
LEL + +VR+ V + FTA+ +S+ + L
Sbjct: 209 LELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDL 268
Query: 339 KHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMI 398
E G+ +H+ V + V NALI+MYS C +N ARR+F ++ DK V+S++ MI
Sbjct: 269 GALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMI 328
Query: 399 KAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXX 458
A+H +EA++ F +M G R + + ++
Sbjct: 329 SGLAMHGASVEAINEFRDMVNRGFRPNQVTLV---------------------------- 360
Query: 459 XXXXXETSLLASYAKCGCIEMARKLFDEGK---SSHKDIIAWNSMISAYSKHGEWFQCFE 515
+LL + + G +++ ++F+ K + I + ++ + G + +
Sbjct: 361 -------ALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYR 413
Query: 516 LYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLL 575
+ ++PD + LL+AC G ++ G++I K + + P + + +L
Sbjct: 414 FIENIP---IEPDHIMLGTLLSACKIHGNMELGEKIAKRLFE--SENPDSGTYVLLSNLY 468
Query: 576 GRAGQIDEASKIIETV 591
+G+ E+++I E++
Sbjct: 469 ASSGKWKESTEIRESM 484
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 144/330 (43%), Gaps = 46/330 (13%)
Query: 62 SSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSM 121
++ +++CY++ G + ++F + D+V ++A++ L + E K L L++EM +++
Sbjct: 192 ATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENV 251
Query: 122 YPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHE 179
+E + VL +C + E G+ VH+ + M+ + V N+L+ +Y + G +N A
Sbjct: 252 SANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARR 311
Query: 180 PLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHL 239
M ++ +N MIS G E F M +PN +T++ LL + L
Sbjct: 312 VFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGL 371
Query: 240 LKIG-QALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMP-RNDLVVWNIMV 297
L IG + +S+ V N+ ++ ++ + ++G L++A E +P D ++ ++
Sbjct: 372 LDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLL 431
Query: 298 SA----------------------------------YAGNGCPKESLELVYCMVRSGVRP 323
SA YA +G KES E+ M SG+
Sbjct: 432 SACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEK 491
Query: 324 DMFTAIPAISSI---TQLKHTEWGKQMHAH 350
+ P S+I Q+ G H H
Sbjct: 492 E-----PGCSTIEVDNQIHEFLVGDIAHPH 516
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 255 bits (651), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/358 (37%), Positives = 217/358 (60%), Gaps = 3/358 (0%)
Query: 344 GKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAV 403
G+ +H+ VIR+G + V N+L+ +Y+ C + SA ++FD + +K +V+W+++I A
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 404 HDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXX 463
+ + EAL+L+ EM G + D ++++L AKIGAL + +H Y
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 464 ETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLS 523
LL YA+CG +E A+ LFDE K+ ++W S+I + +G + EL+ M+ +
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDE--MVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 184
Query: 524 -NVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQID 582
+ P ++TF+G+L AC + G+V +G E F+ M + Y +P EH CMVDLL RAGQ+
Sbjct: 185 EGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVK 244
Query: 583 EASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYA 642
+A + I+++P+ + ++ LL AC +H D LAE A +++ +EP ++G+YVLLSN+YA
Sbjct: 245 KAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYA 304
Query: 643 AAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILKVM 700
+ +W V K+R + G+KK PG S +E +VHEF + D+SHP+S IY+ LK M
Sbjct: 305 SEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 362
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 105/179 (58%)
Query: 240 LKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSA 299
+++G+ +HS++I S + V +LL +Y G + A +F+KMP DLV WN +++
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 300 YAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQ 359
+A NG P+E+L L M G++PD FT + +S+ ++ GK++H ++I+ G
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 360 VSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMK 418
+ N L+D+Y+ C + A+ +FD + DK VSW+++I AV+ EA+ LF M+
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 132/269 (49%), Gaps = 10/269 (3%)
Query: 143 GKMVHAQIVKLGMDAFDLVRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFE 201
G+ +H+ +++ G + V+NSL+ LY G +A++ + M +L WN++I+ E
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 202 SGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTV 261
+GK EE L++ M + I+P+ T+++LL + + L +G+ +H +I L L
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 262 NTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELV-YCMVRSG 320
+ LL +Y + G +++A+ +F++M + V W ++ A NG KE++EL Y G
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 321 VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVH----NALIDMYSACNGL 376
+ P T + + + + H K+ + R +Y++ ++D+ + +
Sbjct: 187 LLPCEITFVGILYACS---HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243
Query: 377 NSA-RRIFDLITDKTVVSWSAMIKAHAVH 404
A I + VV W ++ A VH
Sbjct: 244 KKAYEYIKSMPMQPNVVIWRTLLGACTVH 272
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 117/266 (43%), Gaps = 5/266 (1%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQF 103
+ IH+ G + + L+ Y G + KVF D V +++++ ++
Sbjct: 8 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 67
Query: 104 GEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDLVR 162
G+ E+ L LY EM K + PD + +L +C + GK VH ++K+G+
Sbjct: 68 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 127
Query: 163 NSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRK-ENI 220
N L++LY + G + + L + M W ++I +G +E +LF M E +
Sbjct: 128 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 187
Query: 221 QPNSITVINLLRSTVDLHLLKIG-QALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDAR 279
P IT + +L + ++K G + + + + ++ + + G +K A
Sbjct: 188 LPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY 247
Query: 280 LMFEKMP-RNDLVVWNIMVSAYAGNG 304
+ MP + ++V+W ++ A +G
Sbjct: 248 EYIKSMPMQPNVVIWRTLLGACTVHG 273
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/537 (30%), Positives = 276/537 (51%), Gaps = 42/537 (7%)
Query: 142 QGKMVHAQIVKLGMDAFDLVRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAF 200
+G+++HA +V G+ + LV Y + G L+A + + M +++ MI
Sbjct: 34 RGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACA 93
Query: 201 ESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELT 260
+G +E F M K+ ++ ++ V +LL+++ +L + G+ +H L++ + +
Sbjct: 94 RNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 261 VNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG 320
+ ++L+ MY K G + +AR +F + DLVV+N M+S YA N E+L LV M G
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 321 VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSAR 380
++PD+ T W NALI +S
Sbjct: 214 IKPDVIT---------------W--------------------NALISGFSHMRNEEKVS 238
Query: 381 RIFDLIT----DKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTF 436
I +L+ VVSW+++I + Q +A F +M G + +I +LP
Sbjct: 239 EILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPAC 298
Query: 437 AKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIA 496
+ + + + +HGY ++LL Y KCG I A LF K+ K +
Sbjct: 299 TTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFR--KTPKKTTVT 356
Query: 497 WNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMV 556
+NSMI Y+ HG + EL++QM+ + K D +TF +LTAC ++GL D G+ +F M
Sbjct: 357 FNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQ 416
Query: 557 DLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLA 616
+ Y P EH+ACMVDLLGRAG++ EA ++I+ + + D V+G LL+AC+ H + LA
Sbjct: 417 NKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELA 476
Query: 617 EVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLES 673
+AA+ L +EP+N+GN +LL+++YA AG W+ V +M+ ++ + ++ G SW+E+
Sbjct: 477 RIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVET 533
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 177/390 (45%), Gaps = 52/390 (13%)
Query: 215 MRKENIQPNSI------TVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSM 268
M+K I P+S + + L+ + L G+ LH+ ++ S + + L++
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 269 YVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTA 328
YV+ G + DAR +F++MP+ D+ +M+ A A NG +ESL+ M + G++ D F
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 329 IPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITD 388
+ + L E+GK +H V++ + + ++LIDMYS + +AR++F + +
Sbjct: 121 PSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGE 180
Query: 389 KTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFA------KIGAL 442
+ +V ++AMI +A + Q EAL+L +MKL G + D I ++ F+ K+ +
Sbjct: 181 QDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEI 240
Query: 443 HYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMIS 502
+ L GY D+++W S+IS
Sbjct: 241 LELMCLDGY---------------------------------------KPDVVSWTSIIS 261
Query: 503 AYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQ 562
+ + + F+ + QM + P+ T + LL AC + GKEI V + G +
Sbjct: 262 GLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSV-VTGLE 320
Query: 563 PSQEHHACMVDLLGRAGQIDEASKIIETVP 592
+ ++D+ G+ G I EA + P
Sbjct: 321 DHGFVRSALLDMYGKCGFISEAMILFRKTP 350
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/526 (21%), Positives = 227/526 (43%), Gaps = 90/526 (17%)
Query: 46 IHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPD----SVIYSAILRNLS 101
+HA G+ + + +++KL+ Y + G ++KVF D V+ A RN
Sbjct: 38 LHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARN-- 95
Query: 102 QFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-----EQGKMVHAQIVKLGMD 156
G ++++L ++EM + + D +F++ S S E GKM+H ++K +
Sbjct: 96 --GYYQESLDFFREMYKDGLKLD----AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYE 149
Query: 157 AFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRM 215
+ + +SL+++Y K G + NA + + +L +N MIS + + +E L M
Sbjct: 150 SDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDM 209
Query: 216 RKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSL 275
+ I+P+ IT L+ S++ E V+ L
Sbjct: 210 KLLGIKPDVITWNALISG------------------FSHMRNEEKVSEIL---------- 241
Query: 276 KDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSI 335
LM + D+V W ++S N +++ + M+ G+ P+ T I + +
Sbjct: 242 ---ELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPAC 298
Query: 336 TQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWS 395
T L + + GK++H + + G + V +AL+DMY C ++ A +F KT V+++
Sbjct: 299 TTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFN 358
Query: 396 AMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXX 455
+MI +A H +A+ LF +M+ G ++D + TF
Sbjct: 359 SMIFCYANHGLADKAVELFDQMEATGEKLDHL-------TF------------------- 392
Query: 456 XXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIA---WNSMISAYSKHGEWFQ 512
T++L + + G ++ + LF ++ ++ + + M+ + G+ +
Sbjct: 393 ---------TAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVE 443
Query: 513 CFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDL 558
+E+ M++ +PD + LL AC N G ++ + K + +L
Sbjct: 444 AYEMIKAMRM---EPDLFVWGALLAACRNHGNMELARIAAKHLAEL 486
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 189/632 (29%), Positives = 310/632 (49%), Gaps = 58/632 (9%)
Query: 76 GLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSC 135
G + ++F ++V Y+ ++ + G ++ FLY E K + D + + +L
Sbjct: 130 GKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVK--FRDSVASNVLLSGY 187
Query: 136 FSVSHEQGKMVHAQIVKLGMDAFDLVR-NSLVELYEKNG-FLNAHEPLEGMSVTELAYWN 193
GK A V GM ++V +S+V Y K G ++A + M+ + W
Sbjct: 188 L----RAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWT 243
Query: 194 NMISQAFESGKMEECFQLFSRMRKE-NIQPNSITVINLLRSTVDLHLLKIGQALHSLIIV 252
MI F++G E+ F LF RMR+E +++ NS T+ + ++ D + G +H L+
Sbjct: 244 AMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSR 303
Query: 253 SNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLEL 312
L +L + +L+SMY KLG + +A+ +F M D V WN +++ E+ EL
Sbjct: 304 MPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYEL 363
Query: 313 VYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSA 372
F +P GK M + +I +S
Sbjct: 364 -------------FEKMP-------------GKDMVSWT-------------DMIKGFSG 384
Query: 373 CNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEM---KLCGTRVDFIIV 429
++ +F ++ +K ++W+AMI A + EAL F +M ++C F V
Sbjct: 385 KGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSV 444
Query: 430 INILPTFAK-IGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGK 488
++ + A I L +HG + SL++ Y KCG A K+F
Sbjct: 445 LSATASLADLIEGLQ----IHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFS--C 498
Query: 489 SSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKG 548
S +I+++N+MIS YS +G + +L++ ++ S +P+ VTFL LL+ACV+ G VD G
Sbjct: 499 ISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLG 558
Query: 549 KEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACK 608
+ FK M Y +P +H+ACMVDLLGR+G +D+AS +I T+P + V+G LLSA K
Sbjct: 559 WKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASK 618
Query: 609 MHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGC 668
H LAE+AA+KLI +EP +A YV+LS +Y+ GK ++ + + + +KK PG
Sbjct: 619 THLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGS 678
Query: 669 SWLESNGQVHEFRVADQSHPRSVDIYSILKVM 700
SW+ G+VH F D+S +I LK++
Sbjct: 679 SWIILKGEVHNFLAGDESQLNLEEIGFTLKMI 710
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 177/433 (40%), Gaps = 75/433 (17%)
Query: 163 NSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQ 221
NS + + +NG L E + MS + W MIS E+GKM + +Q+F M
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 222 PNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTA-LLSMYVKLGSLKDARL 280
+ + ++++ DL G+A + ++ + V+ A +++ +V+ G +A
Sbjct: 114 SYNAMITAMIKNKCDL-----GKAYE---LFCDIPEKNAVSYATMITGFVRAGRFDEAEF 165
Query: 281 MFEKMPRN--DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQL 338
++ + P D V N+++S Y G E++ + M A+ + S + +
Sbjct: 166 LYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGM-----------AVKEVVSCSSM 214
Query: 339 KHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMI 398
H Y + AR +FD +T++ V++W+AMI
Sbjct: 215 VHG----------------------------YCKMGRIVDARSLFDRMTERNVITWTAMI 246
Query: 399 KAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRY-----LHGYXX 453
+ + LF+ M+ G D + N L K +VRY +HG
Sbjct: 247 DGYFKAGFFEDGFGLFLRMRQEG---DVKVNSNTLAVMFK-ACRDFVRYREGSQIHGLVS 302
Query: 454 XXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQC 513
SL++ Y+K G + A+ +F G +KD ++WNS+I+ + + +
Sbjct: 303 RMPLEFDLFLGNSLMSMYSKLGYMGEAKAVF--GVMKNKDSVSWNSLITGLVQRKQISEA 360
Query: 514 FELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEH--HACM 571
+EL+ +M D V++ ++ G + K V+L+G P +++ M
Sbjct: 361 YELFEKMP----GKDMVSWTDMIKGFSGKGEISK-------CVELFGMMPEKDNITWTAM 409
Query: 572 VDLLGRAGQIDEA 584
+ G +EA
Sbjct: 410 ISAFVSNGYYEEA 422
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/535 (28%), Positives = 271/535 (50%), Gaps = 11/535 (2%)
Query: 144 KMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL---EGMSVTELAYWNNMISQAF 200
K + Q++ + DL+ N +V K+ ++ + SV +N ++S
Sbjct: 23 KQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSVLSSFSYNTLLSSYA 82
Query: 201 ESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELT 260
K + P+ T + ++ ++ G+ +H ++ ++
Sbjct: 83 VCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIY 142
Query: 261 VNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG 320
V +L+ Y G ++A +F +MP D+V W +++ + G KE+L+ M
Sbjct: 143 VQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---D 199
Query: 321 VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSAR 380
V P++ T + + S ++ GK +H +++ S + NALIDMY C L+ A
Sbjct: 200 VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAM 259
Query: 381 RIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLC-GTRVDFIIVINILPTFAKI 439
R+F + K VSW++MI ++ EA+ LF M+ G + D I+ ++L A +
Sbjct: 260 RVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASL 319
Query: 440 GALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNS 499
GA+ + R++H Y T+++ YAKCG IE A ++F+ +S K++ WN+
Sbjct: 320 GAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRS--KNVFTWNA 377
Query: 500 MISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDL- 558
++ + HG + + +M KP+ VTFL L AC ++GLVD+G+ F +M
Sbjct: 378 LLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSRE 437
Query: 559 YGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSD-PRLAE 617
Y P EH+ CM+DLL RAG +DEA ++++ +P+ D R+ G +LSACK L +
Sbjct: 438 YNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPK 497
Query: 618 VAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLE 672
+++E +++G YVLLSNI+AA +WD VA++R ++ +G+ K PG S++E
Sbjct: 498 EILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 126/480 (26%), Positives = 212/480 (44%), Gaps = 55/480 (11%)
Query: 90 SVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHA 148
S Y+ +L + + + T+F YK V PD + V ++C S +GK +H
Sbjct: 71 SFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHG 130
Query: 149 QIVKLGMDAFDLVRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFESGKMEE 207
+ K+G V+NSLV Y G NA + M V ++ W +I+ +G +E
Sbjct: 131 IVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKE 190
Query: 208 CFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLS 267
FS+M +++PN T + +L S+ + L +G+ +H LI+ L AL+
Sbjct: 191 ALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALID 247
Query: 268 MYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCM-VRSGVRPDMF 326
MYVK L DA +F ++ + D V WN M+S KE+++L M SG++PD
Sbjct: 248 MYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGH 307
Query: 327 TAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLI 386
+S+ L + G+ +H +++ G + + A++DMY+ C + +A IF+ I
Sbjct: 308 ILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGI 367
Query: 387 TDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVR 446
K V +W+A++ A+H LE+L F EM G + + +
Sbjct: 368 RSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLV------------------- 408
Query: 447 YLHGYXXXXXXXXXXXXETSLLASYAKC---GCIEMARKLFDEGKSSHKDIIA----WNS 499
+ LA+ C G ++ R+ F + KS ++ +
Sbjct: 409 -------------------TFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGC 449
Query: 500 MISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSG-LVDKGKEIFKEMVDL 558
MI + G + EL M VKPD +L+AC N G L++ KEI +D+
Sbjct: 450 MIDLLCRAGLLDEALELVKAMP---VKPDVRICGAILSACKNRGTLMELPKEILDSFLDI 506
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 153/495 (30%), Positives = 250/495 (50%), Gaps = 40/495 (8%)
Query: 240 LKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVW-NIMVS 298
L +ALH+ I+ + + L+++Y K G+ A +F++MP D + W +++ +
Sbjct: 19 LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA 78
Query: 299 AYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDY 358
N K SG+RPD F + + L + G+Q+H H I +
Sbjct: 79 LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYAN 138
Query: 359 QVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHD------------- 405
V ++L+DMY+ C LNSA+ +FD I K +SW+AM+ +A
Sbjct: 139 DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILP 198
Query: 406 ------------------QCLEALSLFIEMKLCGTRVDFI---IVINILPTFAKIGALHY 444
+ LEA S+F EM+ RVD + ++ +I+ A + A
Sbjct: 199 VKNLYSWTALISGFVQSGKGLEAFSVFTEMRR--ERVDILDPLVLSSIVGACANLAASIA 256
Query: 445 VRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAY 504
R +HG +L+ YAKC + A+ +F + H+D+++W S+I
Sbjct: 257 GRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFS--RMRHRDVVSWTSLIVGM 314
Query: 505 SKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPS 564
++HG+ + LY+ M VKP++VTF+GL+ AC + G V+KG+E+F+ M YG +PS
Sbjct: 315 AQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPS 374
Query: 565 QEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLI 624
+H+ C++DLLGR+G +DEA +I T+P D + LLSACK ++ A L+
Sbjct: 375 LQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLV 434
Query: 625 -NMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVA 683
+ + K+ Y+LLSNIYA+A W KV++ R L + ++K PG S +E + F
Sbjct: 435 SSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAG 494
Query: 684 DQSHPRSVDIYSILK 698
+ SHP DI+ +LK
Sbjct: 495 ETSHPLKEDIFRLLK 509
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 199/453 (43%), Gaps = 40/453 (8%)
Query: 143 GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMIS---Q 198
K +HA IVKLG+ + N+LV +Y K G + A + + M + W ++++ Q
Sbjct: 22 AKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQ 81
Query: 199 AFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGE 258
A SGK S ++P+ L+++ +L + G+ +H IVS +
Sbjct: 82 ANLSGKT--LSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYAND 139
Query: 259 LTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLEL------ 312
V ++L+ MY K G L A+ +F+ + + + W MVS YA +G +E+LEL
Sbjct: 140 EVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPV 199
Query: 313 ---------VYCMVRSGVRPDMFTAIP-------------AISSI----TQLKHTEWGKQ 346
+ V+SG + F+ +SSI L + G+Q
Sbjct: 200 KNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQ 259
Query: 347 MHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQ 406
+H VI G D V + NALIDMY+ C+ + +A+ IF + + VVSW+++I A H Q
Sbjct: 260 VHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQ 319
Query: 407 CLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYL-HGYXXXXXXXXXXXXET 465
+AL+L+ +M G + + + + ++ + +G + R L T
Sbjct: 320 AEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYT 379
Query: 466 SLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNV 525
LL + G ++ A L D W +++SA + G + + + S
Sbjct: 380 CLLDLLGRSGLLDEAENLI-HTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFK 438
Query: 526 KPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDL 558
D T++ L ++ L K E +++ ++
Sbjct: 439 LKDPSTYILLSNIYASASLWGKVSEARRKLGEM 471
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 185/407 (45%), Gaps = 40/407 (9%)
Query: 34 LDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDS 90
L LC + + L + +HA G+ Q L++ L++ Y K G + +VF + D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 91 VIYSAILRNLSQFGEHEKTL-FLYKEMVEKSMYPDEESCSFVLRSCFSV-SHEQGKMVHA 148
+ ++++L L+Q KTL + PD+ S ++++C ++ S + G+ VH
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 149 QIVKLGMDAFDLVRNSLVELYEKNGFLNA-----------------------------HE 179
+ ++V++SLV++Y K G LN+ E
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 180 PLE---GMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQP-NSITVINLLRSTV 235
LE + V L W +IS +SGK E F +F+ MR+E + + + + +++ +
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 236 DLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNI 295
+L G+ +H L+I + ++ AL+ MY K + A+ +F +M D+V W
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309
Query: 296 MVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRN- 354
++ A +G +++L L MV GV+P+ T + I + + + E G+++ + ++
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369
Query: 355 GSDYQVSVHNALIDMYSACNGLNSARRIFDLIT-DKTVVSWSAMIKA 400
G + + L+D+ L+ A + + +W+A++ A
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSA 416
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 134/316 (42%), Gaps = 39/316 (12%)
Query: 28 FTTSSLLDLCTK---PQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
F S+L+ C H +Q+H F + + + S L+D Y K GL ++ VF
Sbjct: 106 FVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDS 165
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRS-----CFSVS 139
+++ ++A++ ++ G E+ L L++ + K++Y S ++S FSV
Sbjct: 166 IRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVF 225
Query: 140 HE----------------------------QGKMVHAQIVKLGMDAFDLVRNSLVELYEK 171
E G+ VH ++ LG D+ + N+L+++Y K
Sbjct: 226 TEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAK 285
Query: 172 -NGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINL 230
+ + A + M ++ W ++I + G+ E+ L+ M ++PN +T + L
Sbjct: 286 CSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGL 345
Query: 231 LRSTVDLHLLKIGQAL-HSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMP-RN 288
+ + + ++ G+ L S+ + L T LL + + G L +A + MP
Sbjct: 346 IYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPP 405
Query: 289 DLVVWNIMVSAYAGNG 304
D W ++SA G
Sbjct: 406 DEPTWAALLSACKRQG 421
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 153/492 (31%), Positives = 259/492 (52%), Gaps = 24/492 (4%)
Query: 227 VINLLRSTVDLHLLKIGQALHSLIIVSNLCGE---LTVNTALLSMYVKLGSLKDARLMFE 283
+ +L + D+ LK LH+ + + E L + +L + + A +F+
Sbjct: 51 IFSLAETCSDMSQLK---QLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD 107
Query: 284 KMPRNDLVVWNIMVSAYAGNGCPKESLELVY--CMVRSGVRPDMFTAIPAISSITQLKHT 341
+ + +WN ++ A A + KE ++Y + R PD T + + +
Sbjct: 108 SIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 167
Query: 342 EWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAH 401
GKQ+H ++++G V V+N LI +Y +C L+ AR++FD + ++++VSW++MI A
Sbjct: 168 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 227
Query: 402 AVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXX---XXX 458
+ AL LF EM+ D + ++L A +G+L + H +
Sbjct: 228 VRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVA 286
Query: 459 XXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYN 518
+ SL+ Y KCG + MA ++F + +D+ +WN+MI ++ HG + ++
Sbjct: 287 MDVLVKNSLIEMYCKCGSLRMAEQVFQGMQK--RDLASWNAMILGFATHGRAEEAMNFFD 344
Query: 519 QM--KLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLG 576
+M K NV+P+ VTF+GLL AC + G V+KG++ F MV Y +P+ EH+ C+VDL+
Sbjct: 345 RMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIA 404
Query: 577 RAGQIDEASKIIETVPLNSDARVYGPLLSA-CKMHSDPRLAEVAAQKLINMEPKN----- 630
RAG I EA ++ ++P+ DA ++ LL A CK + L+E A+ +I + N
Sbjct: 405 RAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNG 464
Query: 631 --AGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHP 688
+G YVLLS +YA+A +W+ V +R + + G++K PGCS +E NG HEF D SHP
Sbjct: 465 NCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHP 524
Query: 689 RSVDIYSILKVM 700
++ IY LKV+
Sbjct: 525 QTKQIYQQLKVI 536
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 192/412 (46%), Gaps = 24/412 (5%)
Query: 32 SLLDLCTKPQHLQQIHARFFLHGLHQNSS----LSSKLMDCYTKFGLPGLSQKVFYFTEN 87
SL + C+ L+Q+HA F L + L K++ + F + +VF EN
Sbjct: 53 SLAETCSDMSQLKQLHA-FTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIEN 111
Query: 88 PDSVIYSAILRNLSQ-FGEHEKTLFLYKEMVEKS-MYPDEESCSFVLRSC-FSVSHEQGK 144
S +++ ++R + E+ LY++M+E+ PD+ + FVL++C + +GK
Sbjct: 112 HSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGK 171
Query: 145 MVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESG 203
VH QIVK G V N L+ LY G L+ A + + M L WN+MI G
Sbjct: 172 QVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFG 231
Query: 204 KMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVS---NLCGELT 260
+ + QLF M++ + +P+ T+ ++L + L L +G H+ ++ ++ ++
Sbjct: 232 EYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVL 290
Query: 261 VNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMV--R 318
V +L+ MY K GSL+ A +F+ M + DL WN M+ +A +G +E++ MV R
Sbjct: 291 VKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKR 350
Query: 319 SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSV----HNALIDMYSACN 374
VRP+ T + + + G+Q ++R DY + + ++D+ +
Sbjct: 351 ENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR---DYCIEPALEHYGCIVDLIARAG 407
Query: 375 GLNSA-RRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVD 425
+ A + + V W +++ A +E LS I + GT+ D
Sbjct: 408 YITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE-LSEEIARNIIGTKED 458
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 154/461 (33%), Positives = 245/461 (53%), Gaps = 12/461 (2%)
Query: 244 QALHSLIIVSNLCGELTVNTALLSMYVK--LGSLKDARLMFEKMPRNDLVV-WNIMVSAY 300
+ +HS +I++ L ++ LL GSL A+L+F+ + WN ++ +
Sbjct: 22 RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGF 81
Query: 301 AGNGCPKESLELVYCMVRSGV-RPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQ 359
+ + P S+ M+ S V RPD+FT A+ S ++K ++H VIR+G
Sbjct: 82 SNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDD 141
Query: 360 VSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHA---VHDQCLEALSLFIE 416
V +L+ YSA + A ++FD + + +VSW+ MI + +H+Q ALS++
Sbjct: 142 AIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQ---ALSMYKR 198
Query: 417 MKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGC 476
M G D ++ +L + A + AL+ LH +L+ YAKCG
Sbjct: 199 MGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGS 258
Query: 477 IEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLL 536
+E A +F+ + +D++ WNSMI Y HG + + +M S V+P+ +TFLGLL
Sbjct: 259 LENAIGVFNGMRK--RDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLL 316
Query: 537 TACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSD 596
C + GLV +G E F+ M + P+ +H+ CMVDL GRAGQ++ + ++I + D
Sbjct: 317 LGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHED 376
Query: 597 ARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSF 656
++ LL +CK+H + L EVA +KL+ +E NAG+YVL+++IY+AA A MR
Sbjct: 377 PVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKL 436
Query: 657 LRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
+R L+ PG SW+E QVH+F V D+ HP S IYS L
Sbjct: 437 IRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSEL 477
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 175/383 (45%), Gaps = 14/383 (3%)
Query: 33 LLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMD-CYTKF-GLPGLSQKVF-YFTENPD 89
+L C + L++IH+ ++GL + S+ + L+ C G +Q +F +F +P
Sbjct: 11 MLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPS 70
Query: 90 SVIYSAILRNLSQFGEHEKTLFLYKEMVEKSM-YPDEESCSFVLRSCFSV-SHEQGKMVH 147
+ ++ ++R S ++ Y M+ S+ PD + +F L+SC + S + +H
Sbjct: 71 TSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIH 130
Query: 148 AQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKME 206
+++ G +V SLV Y NG + A + + M V +L WN MI G
Sbjct: 131 GSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHN 190
Query: 207 ECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALL 266
+ ++ RM E + +S T++ LL S + L +G LH + + V+ AL+
Sbjct: 191 QALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALI 250
Query: 267 SMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMF 326
MY K GSL++A +F M + D++ WN M+ Y +G E++ MV SGVRP+
Sbjct: 251 DMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPN-- 308
Query: 327 TAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQ----VSVHNALIDMYSACNGL-NSARR 381
AI + + H K+ H S + V + ++D+Y L NS
Sbjct: 309 -AITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEM 367
Query: 382 IFDLITDKTVVSWSAMIKAHAVH 404
I+ + V W ++ + +H
Sbjct: 368 IYASSCHEDPVLWRTLLGSCKIH 390
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 128/283 (45%), Gaps = 13/283 (4%)
Query: 27 FFTTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFY 83
FT + L C + + + +IH G ++ +++ L+ CY+ G ++ KVF
Sbjct: 107 LFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFD 166
Query: 84 FTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQ 142
D V ++ ++ S G H + L +YK M + + D + +L SC VS
Sbjct: 167 EMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNM 226
Query: 143 GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFE 201
G M+H + ++ V N+L+++Y K G L NA GM ++ WN+MI
Sbjct: 227 GVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGV 286
Query: 202 SGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTV 261
G E F +M ++PN+IT + LL L+K G H I+ S LT
Sbjct: 287 HGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQF--HLTP 343
Query: 262 NT----ALLSMYVKLGSLKDA-RLMFEKMPRNDLVVWNIMVSA 299
N ++ +Y + G L+++ +++ D V+W ++ +
Sbjct: 344 NVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGS 386
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 249 bits (637), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 168/663 (25%), Positives = 310/663 (46%), Gaps = 110/663 (16%)
Query: 141 EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMIS-- 197
+ G + H + +K G + N LV LY K+G L A + M + WN +I+
Sbjct: 5 KDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAY 64
Query: 198 ----------QAFESGKME---------------------ECFQLFSRM---RKENIQPN 223
+ FES E E ++F M K++I +
Sbjct: 65 VKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWID 124
Query: 224 SITVINLLRSTVDLHLLKIGQALHSLII----------VSNL------CGEL-------- 259
TV +++ + L + G+ LH +++ VS+L CG+
Sbjct: 125 DFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFN 184
Query: 260 ---------TVNTALLSMYVKLGSLKDARLMFEKMPR-NDLVVWNIMVSAYAGNGCPKES 309
A+++ Y + G + A +F + P ND + WN +++ YA NG +E+
Sbjct: 185 GSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEA 244
Query: 310 LELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDM 369
L++ M +G++ D + ++ ++ LK + GK++HA V++NGS V + ++D+
Sbjct: 245 LKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDV 304
Query: 370 YSACNGLN-------------------------------SARRIFDLITDKTVVSWSAMI 398
Y C + A+R+FD +++K +V W+AM
Sbjct: 305 YCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMF 364
Query: 399 KAH---AVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXX 455
+ D LE FI + D ++++++L + + + +HG+
Sbjct: 365 LGYLNLRQPDSVLELARAFIANET--NTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT 422
Query: 456 XXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFE 515
T+ + Y+KCG +E A ++FD S +D + +N+MI+ + HG + F+
Sbjct: 423 GILMDKKLVTAFVDMYSKCGNVEYAERIFD--SSFERDTVMYNAMIAGCAHHGHEAKSFQ 480
Query: 516 LYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLL 575
+ M KPD++TF+ LL+AC + GLV +G++ FK M++ Y P H+ CM+DL
Sbjct: 481 HFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLY 540
Query: 576 GRAGQIDEASKIIETVP-LNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNY 634
G+A ++D+A +++E + + DA + G L+AC + + L + +KL+ +E N Y
Sbjct: 541 GKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRY 600
Query: 635 VLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIY 694
+ ++N YA++G+WD++ ++R +R + L+ GCSW + Q H F +D SH + IY
Sbjct: 601 IQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIY 660
Query: 695 SIL 697
++L
Sbjct: 661 AML 663
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 169/617 (27%), Positives = 299/617 (48%), Gaps = 96/617 (15%)
Query: 143 GKMVHAQIVKLGMDAFDLVRNSLVELYEK--------------------------NGFLN 176
G+ +H +++K G+D+ + NS++ +Y K +G++
Sbjct: 60 GRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVR 119
Query: 177 AHEPLEGMSVTEL------AYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINL 230
+ + + + ++ + +I ++ + E +LF MR I N +T+ +
Sbjct: 120 SRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATV 179
Query: 231 LRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDL 290
+ + L + + L SL I L G + V+T LL MY LKDAR +F++MP +L
Sbjct: 180 ISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNL 239
Query: 291 VVWNIMVSAYAGNGCPKESLEL-----------------------------VYC--MVRS 319
V WN+M++ Y+ G +++ EL VY M+R
Sbjct: 240 VTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRC 299
Query: 320 GVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSD---------------------- 357
G++P + +S+ + + G Q+H +++ G D
Sbjct: 300 GMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLA 359
Query: 358 ---YQVSV------HNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCL 408
++ SV NALI + + AR +FD DK + SW+AMI +A
Sbjct: 360 LQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQ 419
Query: 409 EALSLFIEM-KLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSL 467
AL LF EM + D I ++++ + +G+L + H Y ++
Sbjct: 420 LALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAI 479
Query: 468 LASYAKCGCIEMARKLFDEGKS-SHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVK 526
+ YAKCG IE A +F + K+ S I WN++I + HG +LY+ ++ +K
Sbjct: 480 IDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIK 539
Query: 527 PDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASK 586
P+ +TF+G+L+AC ++GLV+ GK F+ M +G +P +H+ CMVDLLG+AG+++EA +
Sbjct: 540 PNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKE 599
Query: 587 IIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGK 646
+I+ +P+ +D ++G LLSA + H + +AE+AA +L ++P + G V+LSN+YA AG+
Sbjct: 600 MIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGR 659
Query: 647 WDKVAKMRSFLRDRGLK 663
W+ VA +R +R R ++
Sbjct: 660 WEDVALVREEMRTRDVE 676
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/426 (21%), Positives = 176/426 (41%), Gaps = 50/426 (11%)
Query: 23 FQTRFFTTSSLLD-----LCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGL 77
+ R F +++LL LC K + F +N + +++ Y+K GL
Sbjct: 204 LEGRVFVSTNLLHMYCLCLCLKDAR------KLFDEMPERNLVTWNVMLNGYSKAGLIEQ 257
Query: 78 SQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLR-SCF 136
++++F D V + ++ + + ++ L Y EM+ M P E +L S
Sbjct: 258 AEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASAR 317
Query: 137 SVSHEQGKMVHAQIVKLGMDAFDLV-------------------------------RNSL 165
SV +G +H IVK G D +D + RN+L
Sbjct: 318 SVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNAL 377
Query: 166 VELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRM-RKENIQPN 223
+ + KNG + A E + ++ WN MIS +S + LF M ++P+
Sbjct: 378 IAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPD 437
Query: 224 SITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMF- 282
+IT++++ + L L+ G+ H + S + + A++ MY K GS++ A +F
Sbjct: 438 AITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFH 497
Query: 283 --EKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKH 340
+ + + + WN ++ A +G K +L+L + ++P+ T + +S+
Sbjct: 498 QTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGL 557
Query: 341 TEWGKQMHAHVIRN-GSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKT-VVSWSAMI 398
E GK + + G + + + ++D+ L A+ + + K V+ W ++
Sbjct: 558 VELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLL 617
Query: 399 KAHAVH 404
A H
Sbjct: 618 SASRTH 623
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 134/270 (49%), Gaps = 13/270 (4%)
Query: 43 LQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQ 102
LQQ A H +N+ L+ + K G+ +++VF T + D ++A++ +Q
Sbjct: 360 LQQFEASVKDHIASRNA-----LIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQ 414
Query: 103 FGEHEKTLFLYKEMVEKS-MYPDEESCSFVLRSCFSV-SHEQGKMVHAQIVKLGMDAFDL 160
+ L L++EM+ S + PD + V + S+ S E+GK H + + D
Sbjct: 415 SLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDN 474
Query: 161 VRNSLVELYEKNG----FLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMR 216
+ +++++Y K G LN + +S + ++ WN +I + G + L+S ++
Sbjct: 475 LTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQ 534
Query: 217 KENIQPNSITVINLLRSTVDLHLLKIGQA-LHSLIIVSNLCGELTVNTALLSMYVKLGSL 275
I+PNSIT + +L + L+++G+ S+ + ++ ++ + K G L
Sbjct: 535 SLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRL 594
Query: 276 KDARLMFEKMP-RNDLVVWNIMVSAYAGNG 304
++A+ M +KMP + D+++W +++SA +G
Sbjct: 595 EEAKEMIKKMPVKADVMIWGMLLSASRTHG 624
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 248 bits (634), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 172/590 (29%), Positives = 289/590 (48%), Gaps = 65/590 (11%)
Query: 117 VEKSMYPDEESCSFVLRSCFSVSHEQGKMVHAQIVKLGM----DAFDLVR-NSLVEL--Y 169
++ PDE ++ +C + + VHAQI++ G+ A LV +SL++ Y
Sbjct: 21 ADRQASPDESHFISLIHACKDTA--SLRHVHAQILRRGVLSSRVAAQLVSCSSLLKSPDY 78
Query: 170 EKNGFLNAHE--PLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITV 227
+ F N+ E P N +I E+ + E + F M + ++P+ +T
Sbjct: 79 SLSIFRNSEERNPF---------VLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTF 129
Query: 228 INLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMP- 286
+L+S L +G+ALH+ + + + + V +L+ MY K G LK A +FE+ P
Sbjct: 130 PFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPD 189
Query: 287 ---RNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEW 343
+ +++WN+++ NG YC + DM A S+ + W
Sbjct: 190 RIKKESILIWNVLI-----NG---------YCRAK-----DMHMATTLFRSMPERNSGSW 230
Query: 344 GKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAV 403
+ LI Y LN A+++F+L+ +K VVSW+ +I +
Sbjct: 231 --------------------STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQ 270
Query: 404 HDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXX 463
A+S + EM G + + + +L +K GAL +HGY
Sbjct: 271 TGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAI 330
Query: 464 ETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLS 523
T+L+ YAKCG ++ A +F +HKDI++W +MI ++ HG + Q + + QM S
Sbjct: 331 GTALVDMYAKCGELDCAATVF--SNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYS 388
Query: 524 NVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDE 583
KPD+V FL +LTAC+NS VD G F M Y +P+ +H+ +VDLLGRAG+++E
Sbjct: 389 GEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNE 448
Query: 584 ASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAA 643
A +++E +P+N D + L ACK H R AE +Q L+ ++P+ G+Y+ L +A+
Sbjct: 449 AHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHAS 508
Query: 644 AGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDI 693
G V K R L+ R +++ G S++E +GQ+++F D SH + +I
Sbjct: 509 KGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEI 558
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 201/419 (47%), Gaps = 47/419 (11%)
Query: 20 VAPFQTRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQ 79
+P ++ F SL+ C L+ +HA+ G+ +S ++++L+ C + P S
Sbjct: 25 ASPDESHFI---SLIHACKDTASLRHVHAQILRRGV-LSSRVAAQLVSCSSLLKSPDYSL 80
Query: 80 KVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVS 139
+F +E + + +A++R L++ E ++ + M+ + PD + FVL+S +
Sbjct: 81 SIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLG 140
Query: 140 HEQ-GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTELAYWNNMISQ 198
G+ +HA +K +D VR SLV++Y K
Sbjct: 141 FRWLGRALHAATLKNFVDCDSFVRLSLVDMYAK--------------------------- 173
Query: 199 AFESGKMEECFQLF----SRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSN 254
+G+++ FQ+F R++KE+I ++ + R+ D+H+ L + N
Sbjct: 174 ---TGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAK-DMHM---ATTLFRSMPERN 226
Query: 255 LCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVY 314
G + L+ YV G L A+ +FE MP ++V W +++ ++ G + ++ +
Sbjct: 227 -SGSWST---LIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYF 282
Query: 315 CMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACN 374
M+ G++P+ +T +S+ ++ G ++H +++ NG ++ AL+DMY+ C
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCG 342
Query: 375 GLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINIL 433
L+ A +F + K ++SW+AMI+ AVH + +A+ F +M G + D ++ + +L
Sbjct: 343 ELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVL 401
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 113/247 (45%), Gaps = 4/247 (1%)
Query: 57 QNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEM 116
+NS S L+ Y G ++++F + V ++ ++ SQ G++E + Y EM
Sbjct: 225 RNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEM 284
Query: 117 VEKSMYPDEESCSFVLRSCF-SVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL 175
+EK + P+E + + VL +C S + G +H I+ G+ + +LV++Y K G L
Sbjct: 285 LEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGEL 344
Query: 176 N-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRST 234
+ A M+ ++ W MI G+ + Q F +M +P+ + + +L +
Sbjct: 345 DCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTAC 404
Query: 235 VDLHLLKIG-QALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRN-DLVV 292
++ + +G S+ + + L ++ + + G L +A + E MP N DL
Sbjct: 405 LNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTT 464
Query: 293 WNIMVSA 299
W + A
Sbjct: 465 WAALYRA 471
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 27/182 (14%)
Query: 28 FTTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
+T +++L C+K L +IH +G+ + ++ + L+D Y K G + VF
Sbjct: 294 YTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSN 353
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGK 144
+ D + ++A+++ + G + + +++M+ PDE VL +C + S
Sbjct: 354 MNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSE---- 409
Query: 145 MVHAQIVKLGMDAFDLVRNS------------LVELYEKNGFLN-AHEPLEGMSVT-ELA 190
V LG++ FD +R +V+L + G LN AHE +E M + +L
Sbjct: 410 ------VDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLT 463
Query: 191 YW 192
W
Sbjct: 464 TW 465
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 161/575 (28%), Positives = 284/575 (49%), Gaps = 42/575 (7%)
Query: 143 GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFE 201
G+ +HA + G++ ++ LV Y L+ + + E + WN +I
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 202 SGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTV 261
+ + +E ++ RM + I+ + T +++++ L G+ +H I VS+ L V
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYV 221
Query: 262 NTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGV 321
AL+SMY + G + AR +F++M D V WN +++ Y E+ +L+ M SGV
Sbjct: 222 CNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGV 281
Query: 322 RPDMFT-----------------------------AIPAISSITQLKHT------EWGKQ 346
+ T I +++ I LK +WGK
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKV 341
Query: 347 MHAHVIRNGS-DYQV-SVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVH 404
H VIR+ S + + +V N+LI MYS C+ L A +F + ++ +W+++I A +
Sbjct: 342 FHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYN 401
Query: 405 DQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXX-XXX 463
++ E L EM L G + I + +ILP FA++G L + + H Y
Sbjct: 402 ERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLIL 461
Query: 464 ETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLS 523
SL+ YAK G I A+++FD + +D + + S+I Y + G+ + M S
Sbjct: 462 WNSLVDMYAKSGEIIAAKRVFDSMRK--RDKVTYTSLIDGYGRLGKGEVALAWFKDMDRS 519
Query: 524 NVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDE 583
+KPD VT + +L+AC +S LV +G +F +M ++G + EH++CMVDL RAG +D+
Sbjct: 520 GIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDK 579
Query: 584 ASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQK-LINMEPKNAGNYVLLSNIYA 642
A I T+P + + LL AC +H + + E AA K L+ +P++ G+Y+LL+++YA
Sbjct: 580 ARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYA 639
Query: 643 AAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQV 677
G W K+ +++ L D G++K + +E++ ++
Sbjct: 640 VTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 221/461 (47%), Gaps = 65/461 (14%)
Query: 27 FFTTSSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFY 83
++++SLL C QQ+HA GL +S L KL+ Y+ F L +Q +
Sbjct: 83 LYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTI-- 140
Query: 84 FTEN-------PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCF 136
TEN P +V+ + +RN ++++ +YK M+ K + DE + V+++C
Sbjct: 141 -TENSEILHPLPWNVLIGSYIRN----KRFQESVSVYKRMMSKGIRADEFTYPSVIKACA 195
Query: 137 SV-SHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNN 194
++ G++VH I V N+L+ +Y++ G ++ A + MS + WN
Sbjct: 196 ALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNA 255
Query: 195 MISQAFESGKMEECFQLFSRM-----------------------------------RKEN 219
+I+ K+ E F+L RM R N
Sbjct: 256 IINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCN 315
Query: 220 IQPNSITVINLLRSTVDLHLLKIGQALHSLIIVS-NLCGEL-TVNTALLSMYVKLGSLKD 277
++ S+ +IN L++ + LK G+ H L+I S + ++ V +L++MY + L+
Sbjct: 316 VRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRH 375
Query: 278 ARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFT---AIPAISS 334
A ++F+++ N L WN ++S +A N +E+ L+ M+ SG P+ T +P +
Sbjct: 376 AFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFAR 435
Query: 335 ITQLKHTEWGKQMHAHVIRNGSDYQ--VSVHNALIDMYSACNGLNSARRIFDLITDKTVV 392
+ L+H GK+ H +++R S Y+ + + N+L+DMY+ + +A+R+FD + + V
Sbjct: 436 VGNLQH---GKEFHCYILRRQS-YKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKV 491
Query: 393 SWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINIL 433
+++++I + + AL+ F +M G + D + ++ +L
Sbjct: 492 TYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVL 532
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 189/437 (43%), Gaps = 41/437 (9%)
Query: 194 NMISQAFESGKMEECFQLFSRMRKENIQPNSI--TVINLLRSTVDLHLLKIGQALHSLII 251
N G++ E F+ FS +R ++ + + +LL + V + GQ LH+ I
Sbjct: 51 NSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCI 110
Query: 252 VSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLE 311
S L + + L++ Y L +A+ + E + WN+++ +Y N +ES+
Sbjct: 111 SSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVS 170
Query: 312 LVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYS 371
+ M+ G+R D FT I + L +G+ +H + + + V NALI MY
Sbjct: 171 VYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYK 230
Query: 372 ACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQ------------------------- 406
++ ARR+FD ++++ VSW+A+I + ++
Sbjct: 231 RFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNT 290
Query: 407 ----CLE------ALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXX 456
CLE AL+ + M+ C R+ + +IN L + IGAL + + H
Sbjct: 291 IAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSC 350
Query: 457 XXX--XXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCF 514
SL+ Y++C + A +F + +++ + WNS+IS ++ + +
Sbjct: 351 SFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN--SLSTWNSIISGFAYNERSEETS 408
Query: 515 ELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDL 574
L +M LS P+ +T +L G + GKE ++ Y+ +VD+
Sbjct: 409 FLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDM 468
Query: 575 LGRAGQIDEASKIIETV 591
++G+I A ++ +++
Sbjct: 469 YAKSGEIIAAKRVFDSM 485
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 6/211 (2%)
Query: 81 VFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH 140
VF E +++I+ + E+T FL KEM+ +P+ + + +L V +
Sbjct: 379 VFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGN 438
Query: 141 EQ-GKMVHAQIVKLG--MDAFDLVRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMI 196
Q GK H I++ D ++ NSLV++Y K+G + A + M + + ++I
Sbjct: 439 LQHGKEFHCYILRRQSYKDCL-ILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLI 497
Query: 197 SQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLII-VSNL 255
GK E F M + I+P+ +T++ +L + +L++ G L + + V +
Sbjct: 498 DGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGI 557
Query: 256 CGELTVNTALLSMYVKLGSLKDARLMFEKMP 286
L + ++ +Y + G L AR +F +P
Sbjct: 558 RLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 161/575 (28%), Positives = 284/575 (49%), Gaps = 42/575 (7%)
Query: 143 GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFE 201
G+ +HA + G++ ++ LV Y L+ + + E + WN +I
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 202 SGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTV 261
+ + +E ++ RM + I+ + T +++++ L G+ +H I VS+ L V
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYV 221
Query: 262 NTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGV 321
AL+SMY + G + AR +F++M D V WN +++ Y E+ +L+ M SGV
Sbjct: 222 CNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGV 281
Query: 322 RPDMFT-----------------------------AIPAISSITQLKHT------EWGKQ 346
+ T I +++ I LK +WGK
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKV 341
Query: 347 MHAHVIRNGS-DYQV-SVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVH 404
H VIR+ S + + +V N+LI MYS C+ L A +F + ++ +W+++I A +
Sbjct: 342 FHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYN 401
Query: 405 DQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXX-XXX 463
++ E L EM L G + I + +ILP FA++G L + + H Y
Sbjct: 402 ERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLIL 461
Query: 464 ETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLS 523
SL+ YAK G I A+++FD + +D + + S+I Y + G+ + M S
Sbjct: 462 WNSLVDMYAKSGEIIAAKRVFDSMRK--RDKVTYTSLIDGYGRLGKGEVALAWFKDMDRS 519
Query: 524 NVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDE 583
+KPD VT + +L+AC +S LV +G +F +M ++G + EH++CMVDL RAG +D+
Sbjct: 520 GIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDK 579
Query: 584 ASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQK-LINMEPKNAGNYVLLSNIYA 642
A I T+P + + LL AC +H + + E AA K L+ +P++ G+Y+LL+++YA
Sbjct: 580 ARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYA 639
Query: 643 AAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQV 677
G W K+ +++ L D G++K + +E++ ++
Sbjct: 640 VTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 221/461 (47%), Gaps = 65/461 (14%)
Query: 27 FFTTSSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFY 83
++++SLL C QQ+HA GL +S L KL+ Y+ F L +Q +
Sbjct: 83 LYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTI-- 140
Query: 84 FTEN-------PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCF 136
TEN P +V+ + +RN ++++ +YK M+ K + DE + V+++C
Sbjct: 141 -TENSEILHPLPWNVLIGSYIRN----KRFQESVSVYKRMMSKGIRADEFTYPSVIKACA 195
Query: 137 SV-SHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNN 194
++ G++VH I V N+L+ +Y++ G ++ A + MS + WN
Sbjct: 196 ALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNA 255
Query: 195 MISQAFESGKMEECFQLFSRM-----------------------------------RKEN 219
+I+ K+ E F+L RM R N
Sbjct: 256 IINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCN 315
Query: 220 IQPNSITVINLLRSTVDLHLLKIGQALHSLIIVS-NLCGEL-TVNTALLSMYVKLGSLKD 277
++ S+ +IN L++ + LK G+ H L+I S + ++ V +L++MY + L+
Sbjct: 316 VRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRH 375
Query: 278 ARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFT---AIPAISS 334
A ++F+++ N L WN ++S +A N +E+ L+ M+ SG P+ T +P +
Sbjct: 376 AFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFAR 435
Query: 335 ITQLKHTEWGKQMHAHVIRNGSDYQ--VSVHNALIDMYSACNGLNSARRIFDLITDKTVV 392
+ L+H GK+ H +++R S Y+ + + N+L+DMY+ + +A+R+FD + + V
Sbjct: 436 VGNLQH---GKEFHCYILRRQS-YKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKV 491
Query: 393 SWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINIL 433
+++++I + + AL+ F +M G + D + ++ +L
Sbjct: 492 TYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVL 532
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 189/437 (43%), Gaps = 41/437 (9%)
Query: 194 NMISQAFESGKMEECFQLFSRMRKENIQPNSI--TVINLLRSTVDLHLLKIGQALHSLII 251
N G++ E F+ FS +R ++ + + +LL + V + GQ LH+ I
Sbjct: 51 NSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCI 110
Query: 252 VSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLE 311
S L + + L++ Y L +A+ + E + WN+++ +Y N +ES+
Sbjct: 111 SSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVS 170
Query: 312 LVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYS 371
+ M+ G+R D FT I + L +G+ +H + + + V NALI MY
Sbjct: 171 VYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYK 230
Query: 372 ACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQ------------------------- 406
++ ARR+FD ++++ VSW+A+I + ++
Sbjct: 231 RFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNT 290
Query: 407 ----CLE------ALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXX 456
CLE AL+ + M+ C R+ + +IN L + IGAL + + H
Sbjct: 291 IAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSC 350
Query: 457 XXX--XXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCF 514
SL+ Y++C + A +F + +++ + WNS+IS ++ + +
Sbjct: 351 SFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN--SLSTWNSIISGFAYNERSEETS 408
Query: 515 ELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDL 574
L +M LS P+ +T +L G + GKE ++ Y+ +VD+
Sbjct: 409 FLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDM 468
Query: 575 LGRAGQIDEASKIIETV 591
++G+I A ++ +++
Sbjct: 469 YAKSGEIIAAKRVFDSM 485
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 6/211 (2%)
Query: 81 VFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH 140
VF E +++I+ + E+T FL KEM+ +P+ + + +L V +
Sbjct: 379 VFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGN 438
Query: 141 EQ-GKMVHAQIVKLG--MDAFDLVRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMI 196
Q GK H I++ D ++ NSLV++Y K+G + A + M + + ++I
Sbjct: 439 LQHGKEFHCYILRRQSYKDCL-ILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLI 497
Query: 197 SQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLII-VSNL 255
GK E F M + I+P+ +T++ +L + +L++ G L + + V +
Sbjct: 498 DGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGI 557
Query: 256 CGELTVNTALLSMYVKLGSLKDARLMFEKMP 286
L + ++ +Y + G L AR +F +P
Sbjct: 558 RLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 154/508 (30%), Positives = 252/508 (49%), Gaps = 47/508 (9%)
Query: 230 LLRSTVDLHLLKIGQALHSLIIVSNL--CGELTVNTALLSMYVKLGSLKDARLMFEKMP- 286
LLR L+ G+ LH+++ S L ++ AL Y G + A+ +F+++P
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 287 -RNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGK 345
D V W ++S+++ G S++L M R V D + + +L+ + +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 346 QMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSA--------- 396
Q H ++ G V V NAL+DMY C ++ +RIF+ + +K+VVSW+
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 397 ----------------------MIKAHAVHDQCLEALSLFIEMKL-CGTRVDFIIVINIL 433
M+ + E L L EM CG ++F+ + ++L
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251
Query: 434 PTFAKIGALHYVRYLHGYXXXXXXXXXXXXE-------TSLLASYAKCGCIEMARKLFDE 486
A+ G L R++H Y T+L+ YAKCG I+ + +F
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311
Query: 487 GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVD 546
+ ++++ WN++ S + HG+ +++ QM + VKPD +TF +L+AC +SG+VD
Sbjct: 312 MRK--RNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVD 368
Query: 547 KGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSA 606
+G F + YG +P +H+ACMVDLLGRAG I+EA ++ +P+ + V G LL +
Sbjct: 369 EGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGS 427
Query: 607 CKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTP 666
C +H +AE ++LI M P N +L+SN+Y A G+ D +R LR RG++K P
Sbjct: 428 CSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIP 487
Query: 667 GCSWLESNGQVHEFRVADQSHPRSVDIY 694
G S + N VH F D+SHPR+ +IY
Sbjct: 488 GLSSIYVNDSVHRFSSGDRSHPRTKEIY 515
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 144/333 (43%), Gaps = 45/333 (13%)
Query: 130 FVLRSCFSVSH-EQGKMVHAQIVKLGMDAF--DLVRNSLVELYEKNG-FLNAHEPLEGMS 185
+LR C S GK +HA + G+ + N+L + Y +G + A + + +
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 186 VTEL--AYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIG 243
++E W ++S G + +LF MR++ ++ + ++V+ L L L
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 244 QALHSLIIVSNLCGELTVNTALLSMYVKLG------------------------------ 273
Q H + + + + V AL+ MY K G
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 274 -SLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMV-RSGVRPDMFTAIPA 331
L+ R +F +MP + V W +MV+ Y G G +E LEL+ MV R G + T
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 332 ISSITQLKHTEWGKQMHAHVIRN-------GSDYQVSVHNALIDMYSACNGLNSARRIFD 384
+S+ Q + G+ +H + ++ S V V AL+DMY+ C ++S+ +F
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 385 LITDKTVVSWSAMIKAHAVHDQCLEALSLFIEM 417
L+ + VV+W+A+ A+H + + +F +M
Sbjct: 311 LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM 343
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 151/352 (42%), Gaps = 58/352 (16%)
Query: 44 QQIHARFFLHGLHQ--NSSLSSKLMDCYTKFGLPGLSQKVFYFTENP----DSVIYSAIL 97
+++HA GL + S LS+ L Y G +QK+F E P D+V ++ +L
Sbjct: 26 KELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLF--DEIPLSEKDNVDWTTLL 83
Query: 98 RNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH----EQGKMVHAQIVKL 153
+ S++G ++ L+ EM K + D+ S + C + +QG H VK+
Sbjct: 84 SSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQG---HGVAVKM 140
Query: 154 GMDAFDLVRNSLVELYEKNGFLNA----HEPLEGMSVTELAY------------------ 191
G+ V N+L+++Y K G ++ E LE SV
Sbjct: 141 GVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVF 200
Query: 192 ----------WNNMISQAFESGKMEECFQLFSRMR-KENIQPNSITVINLLRSTVDLHLL 240
W M++ +G E +L + M + N +T+ ++L + L
Sbjct: 201 HEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNL 260
Query: 241 KIGQALHSLIIVSNLC-GE------LTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVW 293
+G+ +H + + GE + V TAL+ MY K G++ + +F M + ++V W
Sbjct: 261 VVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTW 320
Query: 294 NIMVSAYAGNGCPKESLELVYCMVRSGVRPD--MFTAIPAISSITQLKHTEW 343
N + S A +G + +++ M+R V+PD FTA+ + S + + W
Sbjct: 321 NALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGW 371
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 19/241 (7%)
Query: 466 SLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNV 525
+L YA G + A+KLFDE S KD + W +++S++S++G +L+ +M+ V
Sbjct: 48 ALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRV 107
Query: 526 KPDQVTFLGLLTACV---NSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQID 582
+ D V+ + L C + G +G + +M G S + ++D+ G+ G +
Sbjct: 108 EIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKM----GVLTSVKVCNALMDMYGKCGLVS 163
Query: 583 EASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYA 642
E +I E + S L + K R EV + M +NA + ++ Y
Sbjct: 164 EVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHE----MPERNAVAWTVMVAGYL 219
Query: 643 AAGKWDKVAKMRS---FLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILKV 699
AG +V ++ + F GL CS L + Q V R V +Y++ K
Sbjct: 220 GAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVG-----RWVHVYALKKE 274
Query: 700 M 700
M
Sbjct: 275 M 275
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 159/521 (30%), Positives = 264/521 (50%), Gaps = 7/521 (1%)
Query: 132 LRSCFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTELAY 191
LRSC + +H +VK G+D D + L+ A E +S T L
Sbjct: 35 LRSCRDTV--EVSRIHGYMVKTGLDKDDFAVSKLLAFSSVLDIRYASSIFEHVSNTNLFM 92
Query: 192 WNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLII 251
+N MI S + E F +F+++R + + + + I L+S + IG+ LH + +
Sbjct: 93 FNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIAL 152
Query: 252 VSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRN-DLVVWNIMVSAYAGNGCPKESL 310
S + AL+ Y G + DAR +F++MP++ D V ++ +++ Y +L
Sbjct: 153 RSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALAL 212
Query: 311 ELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMY 370
+L M +S V ++ T + +S+I+ L + H I+ G D + + ALI MY
Sbjct: 213 DLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMY 272
Query: 371 SACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVI 430
G++SARRIFD K VV+W+ MI +A E + L +MK + + +
Sbjct: 273 GKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFV 332
Query: 431 NILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSS 490
+L + A A R + T+L+ YAK G +E A ++F+ K
Sbjct: 333 GLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKD- 391
Query: 491 HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSN--VKPDQVTFLGLLTACVNSGLVDKG 548
KD+ +W +MIS Y HG + L+N+M+ N V+P+++TFL +L AC + GLV +G
Sbjct: 392 -KDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEG 450
Query: 549 KEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACK 608
FK MV+ Y + P EH+ C+VDLLGRAGQ++EA ++I +P+ SD+ + LL+AC+
Sbjct: 451 IRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACR 510
Query: 609 MHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDK 649
++ + L E +L M + + +LL+ +A AG +K
Sbjct: 511 VYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEK 551
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 155/501 (30%), Positives = 258/501 (51%), Gaps = 45/501 (8%)
Query: 238 HLLKIGQALHSLIIVSNLCGELTVNTALLSM-YVKLGSLKDARLMFEKMPRNDLVVWNIM 296
HL + Q + S +IVS L + LL ++L +L AR +F++ + ++ +
Sbjct: 36 HLNHLKQ-VQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAV 94
Query: 297 VSAYAGNGCP---KESLELVYCMV-RSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVI 352
++AY+ + P + MV RS RP+ F + S L +H H+
Sbjct: 95 LTAYSSS-LPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLF 153
Query: 353 RNGSDYQVSVHNALIDMY-SACNGLNSARRIFDLITDKTVVSWSAMIKAHA--------- 402
++G V V AL+ Y S+ + + AR++FD ++++ VVSW+AM+ +A
Sbjct: 154 KSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAV 213
Query: 403 ----------------VHDQC------LEALSLFIEM-KLCGTRVDFIIVINILPTFAKI 439
+ C LEA+SLF M R + + V+ +L A+
Sbjct: 214 ALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQT 273
Query: 440 GALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNS 499
G L + +H + SL+ Y KCG +E A +F +S K + AWNS
Sbjct: 274 GTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFK--MASKKSLTAWNS 331
Query: 500 MISAYSKHG---EWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMV 556
MI+ ++ HG E FE ++ ++++KPD +TF+GLL AC + GLV KG+ F M
Sbjct: 332 MINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMT 391
Query: 557 DLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLA 616
+ +G +P EH+ C++DLLGRAG+ DEA +++ T+ + +D ++G LL+ACK+H LA
Sbjct: 392 NRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLA 451
Query: 617 EVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQ 676
EVA + L+ + P N G +++N+Y G W++ + R ++ + K PG S +E + +
Sbjct: 452 EVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNE 511
Query: 677 VHEFRVADQSHPRSVDIYSIL 697
VH+F D+SHP + +IY IL
Sbjct: 512 VHQFYSLDKSHPETEEIYMIL 532
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 183/414 (44%), Gaps = 56/414 (13%)
Query: 41 QHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTEN--PDSVIYSAILR 98
HL+Q+ + + GL + L KL+ + L LS F F P++ +Y+A+L
Sbjct: 38 NHLKQVQSFMIVSGLSHSHFLCFKLLR-FCTLRLCNLSYARFIFDRFSFPNTHLYAAVLT 96
Query: 99 NLSQ-FGEHEKTLF-LYKEMVEKS-------MYPDEESCSFVLRSCFSVSHEQGKMVHAQ 149
S H + F ++ MV +S +YP + L S FS +VH
Sbjct: 97 AYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFST-----PLVHTH 151
Query: 150 IVKLGMDAFDLVRNSLV------------------ELYEKN---------GFL------N 176
+ K G + +V+ +L+ E+ E+N G+ N
Sbjct: 152 LFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISN 211
Query: 177 AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKE-NIQPNSITVINLLRSTV 235
A E M ++ WN +++ ++G E LF RM E +I+PN +TV+ +L +
Sbjct: 212 AVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACA 271
Query: 236 DLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNI 295
L++ + +H+ +L ++ V+ +L+ +Y K G+L++A +F+ + L WN
Sbjct: 272 QTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNS 331
Query: 296 MVSAYAGNGCPKESLELVYCMVR---SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVI 352
M++ +A +G +E++ + M++ + ++PD T I +++ T G+ +
Sbjct: 332 MINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMT 391
Query: 353 -RNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVS-WSAMIKAHAVH 404
R G + ++ + LID+ + A + + K + W +++ A +H
Sbjct: 392 NRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIH 445
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 246 bits (629), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 147/461 (31%), Positives = 245/461 (53%), Gaps = 11/461 (2%)
Query: 246 LHSLIIVSNLCGE-LTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNG 304
LH+L + + TVN ++S YVKL + AR +F++M ++V W ++S Y G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVIS-YVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMG 109
Query: 305 CPKESLELVYCMVRSG-VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVH 363
P+ +L + M V P+ +T + + L + GK +HA + +G + V
Sbjct: 110 KPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVS 169
Query: 364 NALIDMYSACNGLNSARRIFDLITD--KTVVSWSAMIKAHAVHDQCLEALSLF--IEMKL 419
++L+DMY CN + +ARR+FD + + VVSW++MI A+A + + EA+ LF L
Sbjct: 170 SSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAAL 229
Query: 420 CGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEM 479
R + ++ +++ + +G L + + HG TSLL YAKCG +
Sbjct: 230 TSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSC 289
Query: 480 ARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTAC 539
A K+F + +I++ SMI A +KHG +L+++M + P+ VT LG+L AC
Sbjct: 290 AEKIFLRIRC--HSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHAC 347
Query: 540 VNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSD--A 597
+SGLV++G E M + YG P H+ C+VD+LGR G++DEA ++ +T+ + ++ A
Sbjct: 348 SHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGA 407
Query: 598 RVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFL 657
++G LLSA ++H + A+++LI + Y+ LSN YA +G W+ +R +
Sbjct: 408 LLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEM 467
Query: 658 RDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILK 698
+ G K CSW+E+ V+ F D S S +I LK
Sbjct: 468 KRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLK 508
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 136/281 (48%), Gaps = 7/281 (2%)
Query: 54 GLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLY 113
G ++ + L+ Y K ++K+F P+ V +++++ + G+ + L ++
Sbjct: 59 GFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMF 118
Query: 114 KEMVE-KSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQIVKLGMDAFDLVRNSLVELYEK 171
++M E + + P+E + + V ++C +++ + GK +HA++ G+ +V +SLV++Y K
Sbjct: 119 QKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGK 178
Query: 172 -NGFLNAHEPLEGM--SVTELAYWNNMISQAFESGKMEECFQLFSRMRK--ENIQPNSIT 226
N A + M + W +MI+ ++ + E +LF + + N
Sbjct: 179 CNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFM 238
Query: 227 VINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMP 286
+ +++ + L L+ G+ H L+ V T+LL MY K GSL A +F ++
Sbjct: 239 LASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIR 298
Query: 287 RNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFT 327
+ ++ + M+ A A +G + +++L MV + P+ T
Sbjct: 299 CHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVT 339
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 133/295 (45%), Gaps = 21/295 (7%)
Query: 22 PFQTRFFTTSSLLDLCT---KPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLS 78
P +T +S+ C+ + + + IHAR + GL +N +SS L+D Y K +
Sbjct: 126 PVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETA 185
Query: 79 QKVF--YFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRS-- 134
++VF + V +++++ +Q + + L++ + + + F+L S
Sbjct: 186 RRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSF--NAALTSDRANQFMLASVI 243
Query: 135 --CFSVSHEQ-GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL-EGMSVTELA 190
C S+ Q GK+ H + + G ++ +V SL+++Y K G L+ E + + +
Sbjct: 244 SACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVI 303
Query: 191 YWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLI 250
+ +MI + G E +LF M I PN +T++ +L + H + + L L
Sbjct: 304 SYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACS--HSGLVNEGLEYLS 361
Query: 251 IVSNLCGELTVN---TALLSMYVKLGSLKDARLM---FEKMPRNDLVVWNIMVSA 299
+++ G + + T ++ M + G + +A + E ++W ++SA
Sbjct: 362 LMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSA 416
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 245 bits (626), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 165/579 (28%), Positives = 282/579 (48%), Gaps = 18/579 (3%)
Query: 131 VLRSCFSVSHEQ-GKMVHAQIV-----KLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEG 183
+L+ C + S+ + G+ +HA ++ DA+ + NSL+ LY K + A + +
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQI--NSLINLYVKCRETVRARKLFDL 94
Query: 184 MSVTELAYWNNMISQAFESGKMEECFQLFSRMR-KENIQPNSITVINLLRSTVDLHLLKI 242
M + W M+ SG E +LF M +PN + +S + ++
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE 154
Query: 243 GQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAG 302
G+ H + L V L+ MY +A + + +P DL V++ +S Y
Sbjct: 155 GKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLE 214
Query: 303 NGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSV 362
G KE L+++ + T + ++ + L+ Q+H+ ++R G + +V
Sbjct: 215 CGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEA 274
Query: 363 HNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEM---KL 419
ALI+MY C + A+R+FD + + + ++ A+ EAL+LF +M ++
Sbjct: 275 CGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEV 334
Query: 420 CGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEM 479
F I++N + A++ L LHG +L+ YAK G IE
Sbjct: 335 PPNEYTFAILLN---SIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIED 391
Query: 480 ARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTAC 539
ARK F + +DI+ WN+MIS S HG + E +++M + P+++TF+G+L AC
Sbjct: 392 ARKAF--SGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQAC 449
Query: 540 VNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARV 599
+ G V++G F +++ + QP +H+ C+V LL +AG +A + T P+ D
Sbjct: 450 SHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVA 509
Query: 600 YGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRD 659
+ LL+AC + + RL + A+ I P ++G YVLLSNI+A + +W+ VAK+RS + +
Sbjct: 510 WRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNN 569
Query: 660 RGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILK 698
RG+KK PG SW+ Q H F D HP IY+ +K
Sbjct: 570 RGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVK 608
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 124/261 (47%), Gaps = 8/261 (3%)
Query: 45 QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFG 104
Q+H+R G + L++ Y K G +Q+VF T + + + I+ Q
Sbjct: 258 QVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDK 317
Query: 105 EHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVS-HEQGKMVHAQIVKLGMDAFDLVRN 163
E+ L L+ +M K + P+E + + +L S +S +QG ++H ++K G +V N
Sbjct: 318 SFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGN 377
Query: 164 SLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQP 222
+LV +Y K+G + +A + GM+ ++ WN MIS G E + F RM P
Sbjct: 378 ALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIP 437
Query: 223 NSITVINLLRSTVDLHLLKIGQALH---SLIIVSNLCGELTVNTALLSMYVKLGSLKDAR 279
N IT I +L++ H+ + Q LH L+ ++ ++ T ++ + K G KDA
Sbjct: 438 NRITFIGVLQACS--HIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAE 495
Query: 280 LMFEKMPRN-DLVVWNIMVSA 299
P D+V W +++A
Sbjct: 496 DFMRTAPIEWDVVAWRTLLNA 516
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 245 bits (625), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 149/468 (31%), Positives = 245/468 (52%), Gaps = 40/468 (8%)
Query: 241 KIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAY 300
K G+ +H+ II + +L ++ LL +++K G L AR +F+++P+ L +N M+S Y
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 301 AGNGCPKESLELVYCMVRSGVRPDMFT---AIPAISS--ITQLKHTEWGKQMHAHVIRNG 355
+G KE L LV M SG + D +T + A +S T + + +HA +I+
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 356 SDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAH-------------- 401
+ + AL+D Y L SAR +F+ + D+ VV ++MI +
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 402 -------AVHDQCLEALS-----------LFIEMKLCGTRVDFIIVINILPTFAKIGALH 443
V++ +E S ++I M+ G + +++ + + +
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 444 YVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISA 503
+ +H +SLL YAKCG I AR++FD+ + K++ +W SMI
Sbjct: 291 VGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ--EKNVFSWTSMIDG 348
Query: 504 YSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQP 563
Y K+G + EL+ +MK ++P+ VTFLG L+AC +SGLVDKG EIF+ M Y +P
Sbjct: 349 YGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKP 408
Query: 564 SQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKL 623
EH+AC+VDL+GRAG +++A + +P D+ ++ LLS+C +H + LA +AA +L
Sbjct: 409 KMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASEL 468
Query: 624 INMEP-KNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSW 670
+ K G Y+ LSN+YA+ KWD V+K+R ++ R + KT G SW
Sbjct: 469 FKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 156/320 (48%), Gaps = 38/320 (11%)
Query: 137 SVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNM 195
S + + GK +HA I+K G + L+ L+ K G L+ A + + + L+ +N M
Sbjct: 47 SPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYM 106
Query: 196 ISQAFESGKMEECFQLFSRMRKENIQPNSITVINLL-----RSTVDLHLLKIGQALHSLI 250
IS + G ++E L RM + + T+ +L R + + + + +H+ I
Sbjct: 107 ISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARI 166
Query: 251 IVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPR----------------------- 287
I ++ + + TAL+ YVK G L+ AR +FE M
Sbjct: 167 IKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAE 226
Query: 288 --------NDLVVWNIMVSAYAGNG-CPKESLELVYCMVRSGVRPDMFTAIPAISSITQL 338
D+VV+N MV ++ +G K S+++ M R+G P++ T I + + L
Sbjct: 227 EIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVL 286
Query: 339 KHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMI 398
E G+Q+HA ++++G + + ++L+DMY+ C G+N ARR+FD + +K V SW++MI
Sbjct: 287 TSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMI 346
Query: 399 KAHAVHDQCLEALSLFIEMK 418
+ + EAL LF MK
Sbjct: 347 DGYGKNGNPEEALELFTRMK 366
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 181/410 (44%), Gaps = 49/410 (11%)
Query: 40 PQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRN 99
P+ ++IHA G + ++S KL+ + K G +++VF P Y+ ++
Sbjct: 50 PKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISG 109
Query: 100 LSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQG----------KMVHAQ 149
+ G ++ L L V++ Y E++ + L S+ +G ++VHA+
Sbjct: 110 YLKHGLVKELLLL----VQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHAR 165
Query: 150 IVKLGMDAFDLVRNSLVELYEKNGFL--------------------------------NA 177
I+K ++ D++ +LV+ Y K+G L +A
Sbjct: 166 IIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDA 225
Query: 178 HEPLEGMSVTELAYWNNMISQAFESGKM-EECFQLFSRMRKENIQPNSITVINLLRSTVD 236
E V ++ +N M+ SG+ + ++ M++ PN T +++ +
Sbjct: 226 EEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSV 285
Query: 237 LHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIM 296
L ++GQ +H+ I+ S + + + ++LL MY K G + DAR +F++M ++ W M
Sbjct: 286 LTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSM 345
Query: 297 VSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGS 356
+ Y NG P+E+LEL M + P+ T + A+S+ + + G ++ + R+ S
Sbjct: 346 IDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYS 405
Query: 357 DYQVSVHNA-LIDMYSACNGLNSARRIFDLITDKTVVS-WSAMIKAHAVH 404
H A ++D+ LN A + ++ W+A++ + +H
Sbjct: 406 MKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLH 455
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 242 bits (617), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 164/665 (24%), Positives = 309/665 (46%), Gaps = 63/665 (9%)
Query: 37 CTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAI 96
C + + IH+ G+ +S+ ++ Y K G + K F D + ++++
Sbjct: 194 CGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSV 253
Query: 97 LRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMVHAQIVKLGMD 156
L Q G+HE+ + L KEM ++ + P G+
Sbjct: 254 LLAYCQNGKHEEAVELVKEMEKEGISP------------------------------GLV 283
Query: 157 AFDLVRNSLVELYEKNGFLNAHEPLEGMSVT-ELAYWNNMISQAFESGKMEECFQLFSRM 215
++++ +L + + ++ + +E +T ++ W MIS +G + +F +M
Sbjct: 284 TWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
Query: 216 RKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSL 275
+ PN++T+++ + + L ++ G +HS+ + ++ V +L+ MY K G L
Sbjct: 344 FLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKL 403
Query: 276 KDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSI 335
+DAR +F+ + D+ WN M++ Y G ++ EL M + +RP++ T
Sbjct: 404 EDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIIT-------- 455
Query: 336 TQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWS 395
W + + I+NG + + +D++ R D + +W+
Sbjct: 456 -------WNTMISGY-IKNGDEGEA------MDLFQ--------RMEKDGKVQRNTATWN 493
Query: 396 AMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXX 455
+I + + + EAL LF +M+ + + ++++LP A + VR +HG
Sbjct: 494 LIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRR 553
Query: 456 XXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFE 515
+ +L +YAK G IE +R +F ++ KDII WNS+I Y HG +
Sbjct: 554 NLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMET--KDIITWNSLIGGYVLHGSYGPALA 611
Query: 516 LYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLL 575
L+NQMK + P++ T ++ A G VD+GK++F + + Y P+ EH + MV L
Sbjct: 612 LFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLY 671
Query: 576 GRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYV 635
GRA +++EA + I+ + + S+ ++ L+ C++H D +A AA+ L ++EP+N
Sbjct: 672 GRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATES 731
Query: 636 LLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYS 695
++S IYA K + + RD LKK G SW+E +H F DQS + +Y
Sbjct: 732 IVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYP 791
Query: 696 ILKVM 700
+++ M
Sbjct: 792 LVEKM 796
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 154/628 (24%), Positives = 264/628 (42%), Gaps = 113/628 (17%)
Query: 42 HLQQI-HARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNL 100
HL +I HARF L + + +KL+ Y K G ++KVF + +SA++
Sbjct: 98 HLGRILHARFGLF-TEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAY 156
Query: 101 SQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFD 159
S+ + L++ M++ + PD+ +L+ C + E GK++H+ ++KLGM +
Sbjct: 157 SRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCL 216
Query: 160 LVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKE 218
V NS++ +Y K G L+ A + M ++ WN+++ ++GK EE +L M KE
Sbjct: 217 RVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKE 276
Query: 219 NIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDA 278
I P +T L+ Y +LG A
Sbjct: 277 GISPGLVTW-----------------------------------NILIGGYNQLGKCDAA 301
Query: 279 RLMFEKMP----RNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISS 334
+ +KM D+ W M+S NG ++L++ M +GV P+ T + A+S+
Sbjct: 302 MDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSA 361
Query: 335 ITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSW 394
+ LK G ++H+ ++ G V V N+L+DMYS C L AR++FD + +K V +W
Sbjct: 362 CSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTW 421
Query: 395 SAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXX 454
++MI + C +A LF M+ R + I ++ + K G
Sbjct: 422 NSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNG-------------- 467
Query: 455 XXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCF 514
+ +++ +++ +GK ++ WN +I+ Y ++G+ +
Sbjct: 468 -----------------DEGEAMDLFQRMEKDGK-VQRNTATWNLIIAGYIQNGKKDEAL 509
Query: 515 ELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHAC---- 570
EL+ +M+ S P+ VT L LL AC N L G + +E H C
Sbjct: 510 ELFRKMQFSRFMPNSVTILSLLPACAN----------------LLGAKMVREIHGCVLRR 553
Query: 571 -----------MVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSD--PRLAE 617
+ D ++G I E S+ I D + L+ +H P LA
Sbjct: 554 NLDAIHAVKNALTDTYAKSGDI-EYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALAL 612
Query: 618 VAAQKLINMEPKNAGNYVLLSNIYAAAG 645
K + P N LS+I A G
Sbjct: 613 FNQMKTQGITP----NRGTLSSIILAHG 636
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 193/403 (47%), Gaps = 45/403 (11%)
Query: 205 MEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTA 264
++ FQ S++++ T + LL S +D + +G+ LH+ + ++ V T
Sbjct: 69 LDSLFQQGSKVKRS-------TYLKLLESCIDSGSIHLGRILHARFGLFTE-PDVFVETK 120
Query: 265 LLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPD 324
LLSMY K G + DAR +F+ M +L W+ M+ AY+ +E +L M++ GV PD
Sbjct: 121 LLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPD 180
Query: 325 MFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFD 384
F + E GK +H+ VI+ G + V N+++ +Y+ C L+ A + F
Sbjct: 181 DFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFR 240
Query: 385 LITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHY 444
+ ++ V++W++++ A+ + + EA+ L EM+ G ++ NIL
Sbjct: 241 RMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPG-LVTWNIL----------- 288
Query: 445 VRYLHGYXXXXXXXXXXXXETSLLASYAKC-GCIEMARKLFDEGKSSHKDIIAWNSMISA 503
+ GY KC +++ +K+ G ++ D+ W +MIS
Sbjct: 289 ---IGGYN-----------------QLGKCDAAMDLMQKMETFGITA--DVFTWTAMISG 326
Query: 504 YSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQP 563
+G +Q +++ +M L+ V P+ VT + ++AC ++++G E+ V + G+
Sbjct: 327 LIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKM-GFID 385
Query: 564 SQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSA 606
+VD+ + G++++A K+ ++V N D + +++
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVK-NKDVYTWNSMITG 427
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 242 bits (617), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 162/556 (29%), Positives = 267/556 (48%), Gaps = 52/556 (9%)
Query: 144 KMVHAQIVKLGMDAFDLVRNSLV---ELYEKNGFLNAHEPLEGMSVTELAYWNNMISQAF 200
K +HA +V G+ + V L+ L AH+ + + +++ N+++ +
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSA 88
Query: 201 ESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELT 260
+S K E+ L++ M K + P+ T +L++ L G A H ++
Sbjct: 89 QSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEY 148
Query: 261 VNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG 320
V AL+ + G L A +F+ + V W+ M S YA G E++ L
Sbjct: 149 VKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRL-------- 200
Query: 321 VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSAR 380
F +P + W N +I C ++SAR
Sbjct: 201 -----FDEMPYKDQVA------W--------------------NVMITGCLKCKEMDSAR 229
Query: 381 RIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIG 440
+FD T+K VV+W+AMI + EAL +F EM+ G D + ++++L A +G
Sbjct: 230 ELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLG 289
Query: 441 ALHYVRYLHGYXXXXXXXXXXX-----XETSLLASYAKCGCIEMARKLFDEGKSSHKDII 495
L + LH Y +L+ YAKCG I+ A ++F K +D+
Sbjct: 290 DLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKD--RDLS 347
Query: 496 AWNSMISAYS-KHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKE 554
WN++I + H E E++ +M+ V P++VTF+G++ AC +SG VD+G++ F
Sbjct: 348 TWNTLIVGLALHHAE--GSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSL 405
Query: 555 MVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPR 614
M D+Y +P+ +H+ CMVD+LGRAGQ++EA +E++ + +A V+ LL ACK++ +
Sbjct: 406 MRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVE 465
Query: 615 LAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESN 674
L + A +KL++M +G+YVLLSNIYA+ G+WD V K+R D +KK G S +E +
Sbjct: 466 LGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEED 525
Query: 675 GQVHEFRVADQSHPRS 690
R S P S
Sbjct: 526 DDKLMMRYLLSSEPES 541
Score = 149 bits (377), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 140/609 (22%), Positives = 258/609 (42%), Gaps = 104/609 (17%)
Query: 37 CTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPG---LSQKVFYFTENPDSVIY 93
C + L+QIHA ++GL N S+ +L+ + +PG + K+F PD I
Sbjct: 22 CKNIRTLKQIHASMVVNGLMSNLSVVGELIYSAS-LSVPGALKYAHKLFDEIPKPDVSIC 80
Query: 94 SAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVS-HEQGKMVHAQIVK 152
+ +LR +Q + EKT+ LY EM ++ + PD + +FVL++C + G H ++V+
Sbjct: 81 NHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVR 140
Query: 153 LGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQL 211
G + V+N+L+ + G L A E + + W++M S + GK++E +L
Sbjct: 141 HGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRL 200
Query: 212 FSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVK 271
F M ++ ++ + L+ C E+
Sbjct: 201 FDEMPYKDQVAWNVMITGCLK-----------------------CKEM------------ 225
Query: 272 LGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPA 331
AR +F++ D+V WN M+S Y G PKE+L + M +G PD+ T +
Sbjct: 226 ----DSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSL 281
Query: 332 ISSITQLKHTEWGKQMHAHVIRNGSDYQ-----VSVHNALIDMYSACNGLNSARRIFDLI 386
+S+ L E GK++H +++ S + NALIDMY+ C ++ A +F +
Sbjct: 282 LSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGV 341
Query: 387 TDKTVVSWSAMIKAHAVH--DQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHY 444
D+ + +W+ +I A+H + +E +K+ V FI VI
Sbjct: 342 KDRDLSTWNTLIVGLALHHAEGSIEMFEEMQRLKVWPNEVTFIGVI-------------- 387
Query: 445 VRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHK---DIIAWNSMI 501
L S++ G ++ RK F + + +I + M+
Sbjct: 388 ----------------------LACSHS--GRVDEGRKYFSLMRDMYNIEPNIKHYGCMV 423
Query: 502 SAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGY 561
+ G+ + F MK ++P+ + + LL AC G V+ GK ++++ +
Sbjct: 424 DMLGRAGQLEEAFMFVESMK---IEPNAIVWRTLLGACKIYGNVELGKYANEKLLSM--R 478
Query: 562 QPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQ 621
+ + + ++ GQ D K+ + + D RV P + D +L +
Sbjct: 479 KDESGDYVLLSNIYASTGQWDGVQKVRK---MFDDTRVKKPTGVSLIEEDDDKL---MMR 532
Query: 622 KLINMEPKN 630
L++ EP++
Sbjct: 533 YLLSSEPES 541
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 218/412 (52%), Gaps = 35/412 (8%)
Query: 322 RPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARR 381
+PD FT + ++ +G+Q+H V+ G D V V LI MY +C GL AR+
Sbjct: 113 KPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARK 172
Query: 382 IFD--LITDKTV-------------------------------VSWSAMIKAHAVHDQCL 408
+FD L+ D V VSW+ +I +A +
Sbjct: 173 MFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRAS 232
Query: 409 EALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLL 468
EA+ +F M + D + ++ +L A +G+L + Y +++
Sbjct: 233 EAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVI 292
Query: 469 ASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPD 528
YAK G I A +F+ + ++++ W ++I+ + HG + ++N+M + V+P+
Sbjct: 293 DMYAKSGNITKALDVFE--CVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPN 350
Query: 529 QVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKII 588
VTF+ +L+AC + G VD GK +F M YG P+ EH+ CM+DLLGRAG++ EA ++I
Sbjct: 351 DVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVI 410
Query: 589 ETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWD 648
+++P ++A ++G LL+A +H D L E A +LI +EP N+GNY+LL+N+Y+ G+WD
Sbjct: 411 KSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWD 470
Query: 649 KVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILKVM 700
+ MR+ ++ G+KK G S +E +V++F D +HP+ I+ IL+ M
Sbjct: 471 ESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEM 522
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 189/402 (47%), Gaps = 40/402 (9%)
Query: 43 LQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQ 102
L+Q H + GL++++ +K ++ + G + VF P++ +++ ++R LS
Sbjct: 31 LKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSL 90
Query: 103 FGE---HEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQIVKLGMDAF 158
E H + +Y+++ PD + FVL+ VS G+ +H Q+V G D+
Sbjct: 91 LDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSS 150
Query: 159 DLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNM---------------------- 195
V L+++Y G L +A + + M V ++ WN +
Sbjct: 151 VHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPC 210
Query: 196 -----------ISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQ 244
IS +SG+ E ++F RM EN++P+ +T++ +L + DL L++G+
Sbjct: 211 WVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGE 270
Query: 245 ALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNG 304
+ S + + +++N A++ MY K G++ A +FE + ++V W +++ A +G
Sbjct: 271 RICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHG 330
Query: 305 CPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQM-HAHVIRNGSDYQVSVH 363
E+L + MV++GVRP+ T I +S+ + + + GK++ ++ + G + +
Sbjct: 331 HGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHY 390
Query: 364 NALIDMYSACNGLNSARRIFDLITDKTVVS-WSAMIKAHAVH 404
+ID+ L A + + K + W +++ A VH
Sbjct: 391 GCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVH 432
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 119/253 (47%), Gaps = 33/253 (13%)
Query: 221 QPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARL 280
+P++ T +L+ V + + G+ +H ++V + V T L+ MY G L DAR
Sbjct: 113 KPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARK 172
Query: 281 MFEKMPRNDLVVWNIM---------------------------------VSAYAGNGCPK 307
MF++M D+ VWN + +S YA +G
Sbjct: 173 MFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRAS 232
Query: 308 ESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALI 367
E++E+ M+ V PD T + +S+ L E G+++ ++V G + VS++NA+I
Sbjct: 233 EAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVI 292
Query: 368 DMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFI 427
DMY+ + A +F+ + ++ VV+W+ +I A H EAL++F M G R + +
Sbjct: 293 DMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDV 352
Query: 428 IVINILPTFAKIG 440
I IL + +G
Sbjct: 353 TFIAILSACSHVG 365
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 144/498 (28%), Positives = 260/498 (52%), Gaps = 44/498 (8%)
Query: 230 LLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKD-------ARLMF 282
LL+S LKI +H ++ ++L ++ V + LL++ V + A +F
Sbjct: 18 LLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIF 74
Query: 283 EKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTE 342
++ +L V+N+++ ++ P ++ M++S + PD T I + ++++
Sbjct: 75 SQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVL 134
Query: 343 WGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHA 402
G+Q H+ ++R G V V N+L+ MY+ C + +A RIF + + VVSW++M+ +
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 403 ------------------------------VHDQCLE-ALSLFIEMKLCGTRVDFIIVIN 431
+ C E A+ LF MK G + ++++
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 432 ILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSH 491
++ + A +GAL + + Y T+L+ + +CG IE A +F+ +
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPET- 313
Query: 492 KDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEI 551
D ++W+S+I + HG + ++QM P VTF +L+AC + GLV+KG EI
Sbjct: 314 -DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 372
Query: 552 FKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHS 611
++ M +G +P EH+ C+VD+LGRAG++ EA I + + +A + G LL ACK++
Sbjct: 373 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK 432
Query: 612 DPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWL 671
+ +AE LI ++P+++G YVLLSNIYA AG+WDK+ +R ++++ +KK PG S +
Sbjct: 433 NTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLI 492
Query: 672 ESNGQVHEFRVA-DQSHP 688
E +G++++F + DQ HP
Sbjct: 493 EIDGKINKFTMGDDQKHP 510
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 173/393 (44%), Gaps = 49/393 (12%)
Query: 32 SLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMD-CY--TKFGLP----GLSQKVFYF 84
+LL C+ L+ IH L + ++S+L+ C + F P G + +F
Sbjct: 17 ALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQ 76
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRS-----CFSVS 139
+NP+ +++ ++R S E K Y +M++ ++PD + F++++ C V
Sbjct: 77 IQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV- 135
Query: 140 HEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL------------------------ 175
G+ H+QIV+ G V NSLV +Y GF+
Sbjct: 136 ---GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 176 --------NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITV 227
NA E + M L W+ MI+ ++ E+ LF M++E + N +
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 228 INLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPR 287
++++ S L L+ G+ + ++ S++ L + TAL+ M+ + G ++ A +FE +P
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 312
Query: 288 NDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQM 347
D + W+ ++ A +G +++ M+ G P T +S+ + E G ++
Sbjct: 313 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 372
Query: 348 HAHVIRN-GSDYQVSVHNALIDMYSACNGLNSA 379
+ ++ ++ G + ++ + ++DM L A
Sbjct: 373 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEA 405
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 239 bits (609), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 253/481 (52%), Gaps = 3/481 (0%)
Query: 192 WNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLII 251
WN++I ++ + LFS++ + + +P++ T L R + K + +H + I
Sbjct: 74 WNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAI 133
Query: 252 VSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLE 311
VS L + +A++ Y K G + +A +F +P DL +WN+M+ Y G + +
Sbjct: 134 VSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGIN 193
Query: 312 LVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYS 371
L M G +P+ +T + S + +HA ++ D V AL++MYS
Sbjct: 194 LFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYS 253
Query: 372 ACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVIN 431
C + SA +F+ I++ +V+ S++I ++ EAL LF E+++ G + D ++V
Sbjct: 254 RCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAI 313
Query: 432 ILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSH 491
+L + A++ + +H Y ++L+ Y+KCG ++ A LF
Sbjct: 314 VLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLF--AGIPE 371
Query: 492 KDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEI 551
K+I+++NS+I HG FE + ++ + PD++TF LL C +SGL++KG+EI
Sbjct: 372 KNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
Query: 552 FKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHS 611
F+ M +G +P EH+ MV L+G AG+++EA + + ++ D+ + G LLS C++H
Sbjct: 432 FERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHE 491
Query: 612 DPRLAEVAAQKL-INMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSW 670
+ LAEV A+ + N E + + V+LSN+YA G+WD+V ++R + + K PG SW
Sbjct: 492 NTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Query: 671 L 671
Sbjct: 552 F 552
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 176/369 (47%), Gaps = 4/369 (1%)
Query: 78 SQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFS 137
++K+F ++++I+R ++ + L L+ +++ PD + + + R FS
Sbjct: 59 ARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARG-FS 117
Query: 138 VSHEQG--KMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNN 194
S + + +H + G+ + +++V+ Y K G + A + + +LA WN
Sbjct: 118 ESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNV 177
Query: 195 MISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSN 254
MI G ++ LF+ M+ QPN T++ L +D LL + ++H+ + N
Sbjct: 178 MILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKIN 237
Query: 255 LCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVY 314
L V AL++MY + + A +F + DLV + +++ Y+ G KE+L L
Sbjct: 238 LDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFA 297
Query: 315 CMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACN 374
+ SG +PD + S +L + GK++H++VIR G + + V +ALIDMYS C
Sbjct: 298 ELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCG 357
Query: 375 GLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILP 434
L A +F I +K +VS++++I +H A F E+ G D I +L
Sbjct: 358 LLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLC 417
Query: 435 TFAKIGALH 443
T G L+
Sbjct: 418 TCCHSGLLN 426
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 150/349 (42%), Gaps = 3/349 (0%)
Query: 244 QALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGN 303
Q LHS + S L + T L Y L AR +F+ P + +WN ++ AYA
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 304 GCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVH 363
L L ++RS RPD FT ++ T+ + +H I +G +
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 364 NALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTR 423
+A++ YS + A ++F I D + W+ MI + + ++LF M+ G +
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 424 VDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKL 483
+ ++ + L +H + +L+ Y++C CI A +
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 484 FDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSG 543
F+ S D++A +S+I+ YS+ G + L+ ++++S KPD V +L +C
Sbjct: 265 FN--SISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELS 322
Query: 544 LVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVP 592
GKE+ ++ L G + + + ++D+ + G + A + +P
Sbjct: 323 DSVSGKEVHSYVIRL-GLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP 370
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 136/299 (45%), Gaps = 22/299 (7%)
Query: 41 QHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNL 100
+ L+ IH + GL + S ++ Y+K GL + K+F +PD +++ ++
Sbjct: 123 KGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGY 182
Query: 101 SQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFS-VSHEQGKM----------VHAQ 149
G +K + L+ M + P+ C++ V+ G + VHA
Sbjct: 183 GCCGFWDKGINLFNLMQHRGHQPN----------CYTMVALTSGLIDPSLLLVAWSVHAF 232
Query: 150 IVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEEC 208
+K+ +D+ V +LV +Y + + +A +S +L +++I+ G +E
Sbjct: 233 CLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEA 292
Query: 209 FQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSM 268
LF+ +R +P+ + V +L S +L G+ +HS +I L ++ V +AL+ M
Sbjct: 293 LHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDM 352
Query: 269 YVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFT 327
Y K G LK A +F +P ++V +N ++ +G + E ++ G+ PD T
Sbjct: 353 YSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEIT 411
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 12/246 (4%)
Query: 6 NLFHLLNIRKIPYIVAPFQTRFFTTSSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLS 62
NLF+L+ R Q +T +L P L +HA L +S +
Sbjct: 193 NLFNLMQHRG-------HQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVG 245
Query: 63 SKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMY 122
L++ Y++ + VF PD V S+++ S+ G H++ L L+ E+
Sbjct: 246 CALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKK 305
Query: 123 PDEESCSFVLRSCFSVSHE-QGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEP 180
PD + VL SC +S GK VH+ +++LG++ V ++L+++Y K G L A
Sbjct: 306 PDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSL 365
Query: 181 LEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLL 240
G+ + +N++I G F+ F+ + + + P+ IT LL + LL
Sbjct: 366 FAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLL 425
Query: 241 KIGQAL 246
GQ +
Sbjct: 426 NKGQEI 431
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 238 bits (608), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 136/439 (30%), Positives = 231/439 (52%), Gaps = 45/439 (10%)
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
T++++ Y+ L AR F+ P D+V+WN M+S Y G E+ L
Sbjct: 63 TSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSL---------- 112
Query: 323 PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRI 382
F +P ++ W N +++ Y+ + + R+
Sbjct: 113 ---FDQMPCRDVMS------W--------------------NTVLEGYANIGDMEACERV 143
Query: 383 FDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRV--DFIIVINILPTFAKIG 440
FD + ++ V SW+ +IK +A + + E L F M G+ V D + + +L AK+G
Sbjct: 144 FDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTL-VLSACAKLG 202
Query: 441 ALHYVRYLHGYXXXXX-XXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNS 499
A + +++H Y + +L+ Y KCG IE+A ++F K +D+I+WN+
Sbjct: 203 AFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK--RRDLISWNT 260
Query: 500 MISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLY 559
MI+ + HG + L+++MK S + PD+VTF+G+L AC + GLV+ G F M +
Sbjct: 261 MINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDF 320
Query: 560 GYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVA 619
P EH C+VDLL RAG + +A + I +P+ +DA ++ LL A K++ + EVA
Sbjct: 321 SIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVA 380
Query: 620 AQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHE 679
++LI +EP+N N+V+LSNIY AG++D A+++ +RD G KK G SW+E++ + +
Sbjct: 381 LEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVK 440
Query: 680 FRVADQSHPRSVDIYSILK 698
F + + HPR+ ++ IL+
Sbjct: 441 FYSSGEKHPRTEELQRILR 459
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 159/406 (39%), Gaps = 86/406 (21%)
Query: 188 ELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALH 247
++ WN MIS E G M E LF +M
Sbjct: 89 DIVLWNTMISGYIEMGNMLEARSLFDQMP------------------------------- 117
Query: 248 SLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPK 307
C ++ +L Y +G ++ +F+ MP ++ WN ++ YA NG
Sbjct: 118 --------CRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVS 169
Query: 308 ESLELVYCMVRSG-VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNG-SDYQVSVHNA 365
E L MV G V P+ T +S+ +L ++GK +H + G + V+V NA
Sbjct: 170 EVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNA 229
Query: 366 LIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVD 425
LIDMY C + A +F I + ++SW+ MI A H EAL+LF EMK G D
Sbjct: 230 LIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPD 289
Query: 426 FIIVINILPTFAKIG----ALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMAR 481
+ + +L +G L Y + + S++ CGC+
Sbjct: 290 KVTFVGVLCACKHMGLVEDGLAYFNSMF-------------TDFSIMPEIEHCGCV---- 332
Query: 482 KLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVN 541
+ S+ G Q E N+M VK D V + LL A
Sbjct: 333 -------------------VDLLSRAGFLTQAVEFINKMP---VKADAVIWATLLGASKV 370
Query: 542 SGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKI 587
VD G+ +E++ L P+ + + ++ G AG+ D+A+++
Sbjct: 371 YKKVDIGEVALEELIKLEPRNPA--NFVMLSNIYGDAGRFDDAARL 414
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 118/241 (48%), Gaps = 6/241 (2%)
Query: 65 LMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMV-EKSMYP 123
+++ Y G ++VF + ++ +++ +Q G + L +K MV E S+ P
Sbjct: 127 VLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVP 186
Query: 124 DEESCSFVLRSCFSV-SHEQGKMVHAQIVKLGMDAFDL-VRNSLVELYEKNGFLN-AHEP 180
++ + + VL +C + + + GK VH LG + D+ V+N+L+++Y K G + A E
Sbjct: 187 NDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEV 246
Query: 181 LEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLL 240
+G+ +L WN MI+ G E LF M+ I P+ +T + +L + + L+
Sbjct: 247 FKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLV 306
Query: 241 KIGQA-LHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMP-RNDLVVWNIMVS 298
+ G A +S+ ++ E+ ++ + + G L A KMP + D V+W ++
Sbjct: 307 EDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLG 366
Query: 299 A 299
A
Sbjct: 367 A 367
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 97/215 (45%), Gaps = 11/215 (5%)
Query: 378 SARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFA 437
SA ++F + +K VV W++MI + ++ + A F L R D ++ ++ +
Sbjct: 46 SANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYF---DLSPER-DIVLWNTMISGYI 101
Query: 438 KIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAW 497
++G + R L ++L YA G +E ++FD+ +++ +W
Sbjct: 102 EMGNMLEARSLFDQMPCRDVMSW----NTVLEGYANIGDMEACERVFDD--MPERNVFSW 155
Query: 498 NSMISAYSKHGEWFQCFELYNQM-KLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMV 556
N +I Y+++G + + +M +V P+ T +L+AC G D GK + K
Sbjct: 156 NGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGE 215
Query: 557 DLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETV 591
L + ++D+ G+ G I+ A ++ + +
Sbjct: 216 TLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGI 250
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 249/509 (48%), Gaps = 43/509 (8%)
Query: 192 WNNMISQAFESGKMEECFQLFSRM-RKENIQPNSITVINLLRSTVDLHLLKIGQALHSLI 250
+N ++ ES + +F M RK + P+S + ++++ + L+ G +H
Sbjct: 73 FNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQA 132
Query: 251 IVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSA-YAGNGCPKES 309
+ L L V T L+ MY G ++ AR +F++M + +LV WN +++A + GN
Sbjct: 133 LKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN------ 186
Query: 310 LELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDM 369
D+ A + HT W N ++
Sbjct: 187 --------------DVAGAREIFDKMLVRNHTSW--------------------NVMLAG 212
Query: 370 YSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIV 429
Y L SA+RIF + + VSWS MI A + E+ F E++ G + + +
Sbjct: 213 YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSL 272
Query: 430 INILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKS 489
+L ++ G+ + + LHG+ +L+ Y++CG + MAR +F EG
Sbjct: 273 TGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVF-EGMQ 331
Query: 490 SHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGK 549
+ I++W SMI+ + HG+ + L+N+M V PD ++F+ LL AC ++GL+++G+
Sbjct: 332 EKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGE 391
Query: 550 EIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKM 609
+ F EM +Y +P EH+ CMVDL GR+G++ +A I +P+ A V+ LL AC
Sbjct: 392 DYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSS 451
Query: 610 HSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCS 669
H + LAE Q+L ++P N+G+ VLLSN YA AGKW VA +R + + +KKT S
Sbjct: 452 HGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWS 511
Query: 670 WLESNGQVHEFRVADQSHPRSVDIYSILK 698
+E +++F ++ ++ + LK
Sbjct: 512 LVEVGKTMYKFTAGEKKKGIDIEAHEKLK 540
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 137/537 (25%), Positives = 241/537 (44%), Gaps = 88/537 (16%)
Query: 32 SLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKL-MDCYTKF--GLPGLSQKVFYFTENP 88
SLL+ C + L QIH F +G+ +S + KL + C LP + + F E P
Sbjct: 10 SLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPE-P 68
Query: 89 DSVIYSAILRNLSQFGEHEKTLFLYKEMVEKS-MYPDEESCSFVLRSCFSV-SHEQGKMV 146
D+ +++ ++R S+ E ++ ++ EM+ K ++PD S +FV+++ + S G +
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128
Query: 147 HAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKM 205
H Q +K G+++ V +L+ +Y G + A + + M L WN +I+ F +
Sbjct: 129 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 188
Query: 206 EECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTAL 265
++F +M L+R+ ++ +
Sbjct: 189 AGAREIFDKM--------------LVRNHTSWNV-------------------------M 209
Query: 266 LSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDM 325
L+ Y+K G L+ A+ +F +MP D V W+ M+ A NG ES + R+G+ P+
Sbjct: 210 LAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNE 269
Query: 326 FTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDL 385
+ +S+ +Q E+GK +H V + G + VSV+NALIDMYS C + AR +F+
Sbjct: 270 VSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEG 329
Query: 386 ITDK-TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHY 444
+ +K +VSW++MI A+H Q EA+ LF EM G D I I
Sbjct: 330 MQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFI-------------- 375
Query: 445 VRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSH---KDIIAWNSMI 501
SLL + + G IE F E K + +I + M+
Sbjct: 376 ---------------------SLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMV 414
Query: 502 SAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDL 558
Y + G+ + ++ QM + P + + LL AC + G ++ +++ + + +L
Sbjct: 415 DLYGRSGKLQKAYDFICQMP---IPPTAIVWRTLLGACSSHGNIELAEQVKQRLNEL 468
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 165/389 (42%), Gaps = 64/389 (16%)
Query: 245 ALHSLIIVSNLCGELTVNTALLSMYVKLG---------------------SLKDARLMFE 283
A+H + + N C L T + +++K G +L AR +
Sbjct: 4 AIHHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLL 63
Query: 284 KMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG-VRPDMFTAIPAISSITQLKHTE 342
P D ++N +V Y+ + P S+ + M+R G V PD F+ I ++ +
Sbjct: 64 CFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLR 123
Query: 343 WGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHA 402
G QMH +++G + + V LI MY C + AR++FD + +V+W+A+I A
Sbjct: 124 TGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITA-- 181
Query: 403 VHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXX 462
F + G R F K+ ++ +
Sbjct: 182 ----------CFRGNDVAGAR----------EIFDKMLVRNHTSW--------------- 206
Query: 463 XETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKL 522
+LA Y K G +E A+++F E H+D ++W++MI + +G + + F + +++
Sbjct: 207 --NVMLAGYIKAGELESAKRIFSE--MPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQR 262
Query: 523 SNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQID 582
+ + P++V+ G+L+AC SG + GK I V+ GY + ++D+ R G +
Sbjct: 263 AGMSPNEVSLTGVLSACSQSGSFEFGK-ILHGFVEKAGYSWIVSVNNALIDMYSRCGNVP 321
Query: 583 EASKIIETVPLNSDARVYGPLLSACKMHS 611
A + E + + +++ MH
Sbjct: 322 MARLVFEGMQEKRCIVSWTSMIAGLAMHG 350
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 160/588 (27%), Positives = 294/588 (50%), Gaps = 14/588 (2%)
Query: 89 DSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFS-VSHEQGKMVH 147
D V Y+ ++ S++G + + LY EMV + + VL C + +G VH
Sbjct: 76 DVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVH 135
Query: 148 AQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKME 206
+++ LG VR++LV LY ++ A + + M LA N ++ ++G+ +
Sbjct: 136 CRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESK 195
Query: 207 ECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNL-CGELTVNTAL 265
F+++ RM E + N +T ++R L+ G+ LHSL++ S + V L
Sbjct: 196 RLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVL 255
Query: 266 LSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDM 325
+ Y G L + F +P D++ WN +VS A G +SL+L M G RP +
Sbjct: 256 VDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSI 315
Query: 326 FTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQ-VSVHNALIDMYSACNGLNSARRIFD 384
+ ++ ++ + GKQ+H +V++ G D + V +ALIDMY CNG+ ++ ++
Sbjct: 316 RPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQ 375
Query: 385 LITDKTVVSWSAMIKA---HAVHDQCLEALSLFIEMKLCGTRVDFIIVINILP--TFAKI 439
+ + ++++ + + +E L I+ GT +D + + +L + +
Sbjct: 376 SLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDE---GTGIDEVTLSTVLKALSLSLP 432
Query: 440 GALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNS 499
+LH +H SL+ +Y K G E++RK+FDE + +I S
Sbjct: 433 ESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDT--PNIFCLTS 490
Query: 500 MISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLY 559
+I+ Y+++G C ++ +M N+ PD+VT L +L+ C +SGLV++G+ IF + Y
Sbjct: 491 IINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKY 550
Query: 560 GYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVA 619
G P ++ +ACMVDLLGRAG +++A +++ ++D + LL +C++H + + A
Sbjct: 551 GISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRA 610
Query: 620 AQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPG 667
A+ L+N+EP+N Y+ +S Y G ++ ++R R L + G
Sbjct: 611 AEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIG 658
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 171/374 (45%), Gaps = 4/374 (1%)
Query: 167 ELYEKNGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSIT 226
EL + L+AHE + MSV ++ +N +IS G +L++ M ++ ++ T
Sbjct: 55 ELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESAST 114
Query: 227 VINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMP 286
++L D + G +H +I + V +AL+ +Y L + A +F++M
Sbjct: 115 FPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEML 174
Query: 287 RNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQ 346
+L V N+++ + G K E+ M GV + T I + + GKQ
Sbjct: 175 DRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQ 234
Query: 347 MHAHVIRNGSDY-QVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHD 405
+H+ V+++G + + V N L+D YSAC L+ + R F+ + +K V+SW++++ A +
Sbjct: 235 LHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYG 294
Query: 406 QCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXX-XE 464
L++L LF +M+ G R ++ L ++ + + +H Y +
Sbjct: 295 SVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQ 354
Query: 465 TSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSN 524
++L+ Y KC IE + L+ + + NS++++ G E++ M
Sbjct: 355 SALIDMYGKCNGIENSALLYQSLPCLNLE--CCNSLMTSLMHCGITKDIIEMFGLMIDEG 412
Query: 525 VKPDQVTFLGLLTA 538
D+VT +L A
Sbjct: 413 TGIDEVTLSTVLKA 426
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/498 (20%), Positives = 225/498 (45%), Gaps = 29/498 (5%)
Query: 29 TTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFT 85
T S+L +C+ + Q+H R G N + S L+ Y L ++ K+F
Sbjct: 114 TFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEM 173
Query: 86 ENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHE---- 141
+ + + + +LR Q GE ++ +Y M + + + + +++R C SH+
Sbjct: 174 LDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGC---SHDRLVY 230
Query: 142 QGKMVHAQIVKLGMDAFDL-VRNSLVELYEKNGFLNAH-EPLEGMSVTELAYWNNMISQA 199
+GK +H+ +VK G + ++ V N LV+ Y G L+ + ++ WN+++S
Sbjct: 231 EGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVC 290
Query: 200 FESGKMEECFQLFSRM----RKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNL 255
+ G + + LFS+M ++ +I+P ++ +N D ++ G+ +H ++
Sbjct: 291 ADYGSVLDSLDLFSKMQFWGKRPSIRP-FMSFLNFCSRNSD---IQSGKQIHCYVLKMGF 346
Query: 256 -CGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVY 314
L V +AL+ MY K ++++ L+++ +P +L N ++++ G K+ +E+
Sbjct: 347 DVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFG 406
Query: 315 CMVRSGVRPD---MFTAIPAIS-SITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMY 370
M+ G D + T + A+S S+ + H+ +H I++G V+V +LID Y
Sbjct: 407 LMIDEGTGIDEVTLSTVLKALSLSLPESLHS--CTLVHCCAIKSGYAADVAVSCSLIDAY 464
Query: 371 SACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVI 430
+ +R++FD + + +++I +A + + + + EM D + ++
Sbjct: 465 TKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTIL 524
Query: 431 NILPTFAKIGALHYVRYL-HGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKS 489
++L + G + + ++ + G +E A +L + +
Sbjct: 525 SVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARG 584
Query: 490 SHKDIIAWNSMISAYSKH 507
D +AW+S++ + H
Sbjct: 585 D-ADCVAWSSLLQSCRIH 601
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 113/255 (44%), Gaps = 6/255 (2%)
Query: 354 NGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSL 413
N SD V HN ID L SA FD ++ + VV+++ +I ++ + L A+ L
Sbjct: 41 NPSDL-VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIEL 99
Query: 414 FIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAK 473
+ EM CG R ++L + +H ++L+ YA
Sbjct: 100 YAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYAC 159
Query: 474 CGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFL 533
+++A KLFDE +++ N ++ + + GE + FE+Y +M+L V + +T+
Sbjct: 160 LRLVDVALKLFDE--MLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYC 217
Query: 534 GLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHA-CMVDLLGRAGQIDEASKIIETVP 592
++ C + LV +GK++ +V G+ S A +VD G + + + VP
Sbjct: 218 YMIRGCSHDRLVYEGKQLHSLVVK-SGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVP 276
Query: 593 LNSDARVYGPLLSAC 607
D + ++S C
Sbjct: 277 -EKDVISWNSIVSVC 290
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 246/488 (50%), Gaps = 35/488 (7%)
Query: 246 LHSLIIVSNLCGE--LTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGN 303
+H+L+I L E T S G + A K+ WN ++ ++ +
Sbjct: 27 IHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNS 86
Query: 304 GCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVH 363
P++S+ + M+R G+ PD T + S ++L + + G +H V+++G ++ + +
Sbjct: 87 RNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFIC 146
Query: 364 NALIDMYSACNGLNSARRIFD------LIT-------------------------DKTVV 392
N LI MY + SAR++FD L+T ++ VV
Sbjct: 147 NTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVV 206
Query: 393 SWSAMIKAHAVHDQCLEALSLFIEM-KLCGTRVDFIIVINILPTFAKIGALHYVRYLHGY 451
+WS+MI + + +AL +F +M ++ ++ + + +++++ A +GAL+ + +H Y
Sbjct: 207 TWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRY 266
Query: 452 XXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWF 511
+TSL+ YAKCG I A +F D + WN++I + HG
Sbjct: 267 ILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIR 326
Query: 512 QCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACM 571
+ +L+++M+ S + PD++TFL LL AC + GLV + FK + + G +P EH+ACM
Sbjct: 327 ESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKE-SGAEPKSEHYACM 385
Query: 572 VDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNA 631
VD+L RAG + +A I +P+ + G LL+ C H + LAE +KLI ++P N
Sbjct: 386 VDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHND 445
Query: 632 GNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSV 691
G YV L+N+YA ++ MR + +G+KK G S L+ +G H F D++H S
Sbjct: 446 GRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSD 505
Query: 692 DIYSILKV 699
IY++L++
Sbjct: 506 KIYAVLQL 513
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 152/329 (46%), Gaps = 38/329 (11%)
Query: 37 CTKPQHLQQIHARFFLHGLHQNSSLSSKLMD--CYTKFGLPGLSQKVFYFTENPDSVIYS 94
C L +IH GL + S+ + + G + K +P + ++
Sbjct: 18 CKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWN 77
Query: 95 AILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQIVKL 153
++R S EK++ +Y +M+ + PD + F+++S +S+ + G +H +VK
Sbjct: 78 FVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKS 137
Query: 154 GMD------------------------AFD-------LVRNSLVELYEKNG-FLNAHEPL 181
G++ FD + NS+++ Y K+G ++A
Sbjct: 138 GLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVF 197
Query: 182 EGMSVTELAYWNNMISQAFESGKMEECFQLFSR-MRKENIQPNSITVINLLRSTVDLHLL 240
+ MS ++ W++MI + G+ + ++F + MR + + N +T+++++ + L L
Sbjct: 198 DEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGAL 257
Query: 241 KIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEK--MPRNDLVVWNIMVS 298
G+ +H I+ +L + + T+L+ MY K GS+ DA +F + + D ++WN ++
Sbjct: 258 NRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIG 317
Query: 299 AYAGNGCPKESLELVYCMVRSGVRPDMFT 327
A +G +ESL+L + M S + PD T
Sbjct: 318 GLASHGFIRESLQLFHKMRESKIDPDEIT 346
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 111/238 (46%), Gaps = 9/238 (3%)
Query: 56 HQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKE 115
H+N + ++D Y K G ++ VF D V +S+++ + GE+ K L ++ +
Sbjct: 171 HKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQ 230
Query: 116 MVE-KSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNG 173
M+ S +E + V+ +C + +GK VH I+ + + +++ SL+++Y K G
Sbjct: 231 MMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCG 290
Query: 174 FL-NAHEPLEGMSV--TELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINL 230
+ +A SV T+ WN +I G + E QLF +MR+ I P+ IT + L
Sbjct: 291 SIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCL 350
Query: 231 LRSTVDLHLLKIGQALHSLIIVSNLCGELTVN--TALLSMYVKLGSLKDARLMFEKMP 286
L + L+K +A H + E ++ + + G +KDA +MP
Sbjct: 351 LAACSHGGLVK--EAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMP 406
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 236 bits (601), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 238/442 (53%), Gaps = 39/442 (8%)
Query: 265 LLSMYVKL-GSLKD---ARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG 320
LL+ ++ + GSL + A +F + +++V+N M+ Y+ G P ESL M G
Sbjct: 38 LLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRG 97
Query: 321 VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSAR 380
+ D +T P + S + L +GK +H +IR G + ++++Y++ + A+
Sbjct: 98 IWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQ 157
Query: 381 RIFDLITDKTVVSWSAMIKA--------HAVH--------------------DQC---LE 409
++FD ++++ VV W+ MI+ +H +C E
Sbjct: 158 KVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDRE 217
Query: 410 ALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXX-XXXETSLL 468
AL LF EM G D V+ +LP A +G L +++H +L+
Sbjct: 218 ALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALV 277
Query: 469 ASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQM-KLSNVKP 527
Y K G +E A +F K +++++WN++IS + +G+ +L++ M + V P
Sbjct: 278 DFYCKSGDLEAATAIFR--KMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAP 335
Query: 528 DQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKI 587
++ TFLG+L C +G V++G+E+F M++ + + EH+ MVDL+ R+G+I EA K
Sbjct: 336 NEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKF 395
Query: 588 IETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKW 647
++ +P+N++A ++G LLSAC+ H D +LAEVAA +L+ +EP N+GNYVLLSN+YA G+W
Sbjct: 396 LKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRW 455
Query: 648 DKVAKMRSFLRDRGLKKTPGCS 669
V K+R+ ++ L+K+ G S
Sbjct: 456 QDVEKVRTLMKKNRLRKSTGQS 477
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 186/400 (46%), Gaps = 37/400 (9%)
Query: 42 HLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLS 101
L +IHA H LH ++ L + + + +VF +NP+ ++++A+++ S
Sbjct: 19 RLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYS 78
Query: 102 QFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQIVKLGMDAFDL 160
G ++L + M + ++ DE + + +L+SC S+S + GK VH ++++ G
Sbjct: 79 LVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGK 138
Query: 161 VRNSLVELY-----------------EKN---------GFLNAHEPLEG------MSVTE 188
+R +VELY E+N GF ++ + G MS
Sbjct: 139 IRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERS 198
Query: 189 LAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHS 248
+ WN+MIS + G+ E +LF M + P+ TV+ +L + L +L G+ +HS
Sbjct: 199 IVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHS 258
Query: 249 LIIVSNLCGE-LTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPK 307
S L + +TV AL+ Y K G L+ A +F KM R ++V WN ++S A NG +
Sbjct: 259 TAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGE 318
Query: 308 ESLELVYCMVRSG-VRPDMFTAIPAISSITQLKHTEWGKQMHAHVI-RNGSDYQVSVHNA 365
++L M+ G V P+ T + ++ + E G+++ ++ R + + + A
Sbjct: 319 FGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGA 378
Query: 366 LIDMYSACNGLNSARRIF-DLITDKTVVSWSAMIKAHAVH 404
++D+ S + A + ++ + W +++ A H
Sbjct: 379 MVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSH 418
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 252/491 (51%), Gaps = 36/491 (7%)
Query: 244 QALHSLIIVSNLCGELTVNTALLSMYVKLGS-LKDARLMFEKMPRNDLVVWNIMVSAYAG 302
+ +H+ +I + L + + +L+ S + A L+F ++ + VWN ++ ++
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 303 NGCPKESLELVYCMVRSG--VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQV 360
+ P+ ++ + M+ S V+P T + +L G+Q+H VI+ G +
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDS 161
Query: 361 SVHNALIDMYSACNGLNSARRIF-------------------------------DLITDK 389
+ N ++ MY C L A RIF D + +
Sbjct: 162 FIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR 221
Query: 390 TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLH 449
VSW++MI + + +AL +F EM+ + D ++++L A +GA R++H
Sbjct: 222 NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIH 281
Query: 450 GYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGE 509
Y T+L+ Y KCGCIE +F+ + K + WNSMI + +G
Sbjct: 282 EYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFE--CAPKKQLSCWNSMILGLANNGF 339
Query: 510 WFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHA 569
+ +L+++++ S ++PD V+F+G+LTAC +SG V + E F+ M + Y +PS +H+
Sbjct: 340 EERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYT 399
Query: 570 CMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPK 629
MV++LG AG ++EA +I+ +P+ D ++ LLSAC+ + +A+ AA+ L ++P
Sbjct: 400 LMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPD 459
Query: 630 NAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPR 689
YVLLSN YA+ G +++ + R +++R ++K GCS +E + +VHEF +HP+
Sbjct: 460 ETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPK 519
Query: 690 SVDIYSILKVM 700
S +IYS+L ++
Sbjct: 520 SAEIYSLLDIL 530
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 148/351 (42%), Gaps = 35/351 (9%)
Query: 192 WNNMISQAFESGKMEECFQLFSRM--RKENIQPNSITVINLLRSTVDLHLLKIGQALHSL 249
WN +I S E +F M +++P +T ++ ++ L + G+ LH +
Sbjct: 92 WNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGM 151
Query: 250 IIVSNLCGELTVNTALLSMYV-------------------------------KLGSLKDA 278
+I L + + +L MYV K G + A
Sbjct: 152 VIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQA 211
Query: 279 RLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQL 338
+ +F++MP+ + V WN M+S + NG K++L++ M V+PD FT + +++ L
Sbjct: 212 QNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYL 271
Query: 339 KHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMI 398
+E G+ +H +++RN + V ALIDMY C + +F+ K + W++MI
Sbjct: 272 GASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMI 331
Query: 399 KAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXX 458
A + A+ LF E++ G D + I +L A G +H
Sbjct: 332 LGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMI 391
Query: 459 XXXXXETSLLASY-AKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHG 508
+L+ + G +E A L + +D + W+S++SA K G
Sbjct: 392 EPSIKHYTLMVNVLGGAGLLEEAEALI-KNMPVEEDTVIWSSLLSACRKIG 441
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 148/314 (47%), Gaps = 12/314 (3%)
Query: 29 TTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF---- 84
T S +L C F H+N + + ++ +++ P ++ +F
Sbjct: 59 TASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCS 118
Query: 85 --TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ 142
+ P + Y ++ + + G+ L+ ++++ + D SF+ + +
Sbjct: 119 SPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDD----SFIRNTMLHMYVTC 174
Query: 143 GKMVHAQIVKLGMDAFDLVR-NSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAF 200
G ++ A + LGM FD+V NS++ + K G ++ A + M WN+MIS
Sbjct: 175 GCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFV 234
Query: 201 ESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELT 260
+G+ ++ +F M++++++P+ T+++LL + L + G+ +H I+ +
Sbjct: 235 RNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSI 294
Query: 261 VNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG 320
V TAL+ MY K G +++ +FE P+ L WN M+ A NG + +++L + RSG
Sbjct: 295 VVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSG 354
Query: 321 VRPDMFTAIPAISS 334
+ PD + I +++
Sbjct: 355 LEPDSVSFIGVLTA 368
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 233 bits (595), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 151/544 (27%), Positives = 272/544 (50%), Gaps = 8/544 (1%)
Query: 143 GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNA-HEPLEGMSVTELAYWNNMISQAFE 201
G +H +K G D +V NSL+ +Y K A + + M + + ++I+ +
Sbjct: 66 GAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQ 125
Query: 202 SGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDL-HLLKIGQALHSLIIVSNLCGE-L 259
G + E +L M P S V +LL + K+ + H+L++V E +
Sbjct: 126 DGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESV 185
Query: 260 TVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRS 319
++TAL+ MY+K A +F++M + V W M+S N + ++L M R
Sbjct: 186 LLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRE 245
Query: 320 GVRPDMFTAIPAISSITQLKH-TEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNS 378
+RP+ T + + + +L + + K++H R+G + A + MY C ++
Sbjct: 246 NLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSL 305
Query: 379 ARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAK 438
+R +F+ + VV WS+MI +A C E ++L +M+ G + + ++ I+
Sbjct: 306 SRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTN 365
Query: 439 IGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWN 498
L + +H +L+ YAKCG + AR++F E + KD+++W+
Sbjct: 366 STLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYE--LTEKDLVSWS 423
Query: 499 SMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDL 558
SMI+AY HG + E++ M + D + FL +L+AC ++GLV++ + IF +
Sbjct: 424 SMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQ-AGK 482
Query: 559 YGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLA-E 617
Y + EH+AC ++LLGR G+ID+A ++ +P+ AR++ LLSAC+ H +A +
Sbjct: 483 YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGK 542
Query: 618 VAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQV 677
+ A +L+ EP N NYVLLS I+ +G + ++R ++ R L K G S +E Q+
Sbjct: 543 IIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPELQI 602
Query: 678 HEFR 681
+++
Sbjct: 603 EDYQ 606
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/520 (25%), Positives = 236/520 (45%), Gaps = 46/520 (8%)
Query: 45 QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFG 104
Q+H G ++ +S+ L+ Y KF +KVF + D+V Y +I+ + Q G
Sbjct: 68 QLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDG 127
Query: 105 EHEKTLFLYKEMVEKSMYPDEESCSFVLRSC--FSVSHEQGKMVHAQI-VKLGMDAFDLV 161
+ + L KEM P E + +L C S + +M HA + V M L+
Sbjct: 128 LLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLL 187
Query: 162 RNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENI 220
+LV++Y K + A + M V W MIS + E LF M++EN+
Sbjct: 188 STALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENL 247
Query: 221 QPNSITVINLLRSTVDLHL-LKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDAR 279
+PN +T++++L + V+L+ + + +H + + A ++MY + G++ +R
Sbjct: 248 RPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSR 307
Query: 280 LMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLK 339
++FE D+V+W+ M+S YA G E + L+ M + G+ + T + +S+ T
Sbjct: 308 VLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNST 367
Query: 340 HTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIK 399
+ +H+ +++ G + + NALIDMY+ C L++AR +F +T+K +VSWS+MI
Sbjct: 368 LLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMIN 427
Query: 400 AHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXX 459
A+ +H EAL +F M G VD + + I
Sbjct: 428 AYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAI--------------------------- 460
Query: 460 XXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIA--WNSMISAYSKHGEWFQCFELY 517
L++ G +E A+ +F + H + + I+ + G+ FE+
Sbjct: 461 --------LSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVT 512
Query: 518 NQMKLSNVKPDQVTFLGLLTACVNSGLVD-KGKEIFKEMV 556
M + KP + LL+AC G +D GK I E++
Sbjct: 513 INMPM---KPSARIWSSLLSACETHGRLDVAGKIIANELM 549
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 166/349 (47%), Gaps = 6/349 (1%)
Query: 242 IGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYA 301
+G LH L + + + V+ +L+SMY K R +F++M D V + ++++
Sbjct: 65 LGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCC 124
Query: 302 GNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQL-KHTEWGKQMHAHVIRNGS-DYQ 359
+G E+++L+ M G P ++ T++ ++ + HA V+ +
Sbjct: 125 QDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQES 184
Query: 360 VSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKL 419
V + AL+DMY + +A +FD + K VSW+AMI + + LF M+
Sbjct: 185 VLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQR 244
Query: 420 CGTRVDFIIVINILPTFAKIG-ALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIE 478
R + + ++++LP ++ V+ +HG+ + + Y +CG +
Sbjct: 245 ENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVS 304
Query: 479 MARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTA 538
++R LF+ K +D++ W+SMIS Y++ G+ + L NQM+ ++ + VT L +++A
Sbjct: 305 LSRVLFETSKV--RDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSA 362
Query: 539 CVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKI 587
C NS L+ + +++ G+ ++D+ + G + A ++
Sbjct: 363 CTNSTLLSFASTVHSQILKC-GFMSHILLGNALIDMYAKCGSLSAAREV 410
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 157/315 (49%), Gaps = 12/315 (3%)
Query: 30 TSSLLDLCTKPQHLQQIHARFFLHGL-------HQNSSLSSKLMDCYTKFGLPGLSQKVF 82
+SLL LCT+ ++ AR F H L ++ LS+ L+D Y KF + VF
Sbjct: 151 VASLLALCTRMGSSSKV-ARMF-HALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVF 208
Query: 83 YFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ 142
E + V ++A++ +E + L++ M +++ P+ + VL +C +++
Sbjct: 209 DQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGS 268
Query: 143 G--KMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQA 199
K +H + G A + + + + +Y + G ++ L E V ++ W++MIS
Sbjct: 269 SLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGY 328
Query: 200 FESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGEL 259
E+G E L ++MRKE I+ NS+T++ ++ + + LL +HS I+ +
Sbjct: 329 AETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHI 388
Query: 260 TVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRS 319
+ AL+ MY K GSL AR +F ++ DLV W+ M++AY +G E+LE+ M++
Sbjct: 389 LLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKG 448
Query: 320 GVRPDMFTAIPAISS 334
G D + +S+
Sbjct: 449 GHEVDDMAFLAILSA 463
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 233 bits (594), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 158/552 (28%), Positives = 281/552 (50%), Gaps = 24/552 (4%)
Query: 160 LVRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKE 218
++ N L+ +Y K G L A + + M + W +I+ ++G +E F LFS M
Sbjct: 97 ILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH 156
Query: 219 NIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKL---GSL 275
PN T+ ++L S + G+ +H L + L + V A++SMY + +
Sbjct: 157 CF-PNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAA 211
Query: 276 KDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSI 335
+A +FE + +LV WN M++A+ K+++ + M GV D T + SS+
Sbjct: 212 YEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSL 271
Query: 336 ---TQLKHTEWGK---QMHAHVIRNGSDYQVSVHNALIDMYSAC--NGLNSARRIFDLIT 387
+ L E K Q+H+ +++G Q V ALI +YS + + + ++
Sbjct: 272 YKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSH 331
Query: 388 DKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRY 447
+ +V+W+ +I A AV+D A+ LF +++ D+ ++L A + +
Sbjct: 332 CRDIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALS 390
Query: 448 LHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKH 507
+H SL+ +YAKCG +++ ++FD+ S +D+++WNSM+ AYS H
Sbjct: 391 IHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDS--RDVVSWNSMLKAYSLH 448
Query: 508 GEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEH 567
G+ ++ +M ++ PD TF+ LL+AC ++G V++G IF+ M + P H
Sbjct: 449 GQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNH 505
Query: 568 HACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINM- 626
+AC++D+L RA + EA ++I+ +P++ DA V+ LL +C+ H + RL ++AA KL +
Sbjct: 506 YACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELV 565
Query: 627 EPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQS 686
EP N+ +Y+ +SNIY A G +++ + ++K P SW E +VHEF +
Sbjct: 566 EPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRH 625
Query: 687 HPRSVDIYSILK 698
P +Y LK
Sbjct: 626 RPDKEAVYRELK 637
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 129/520 (24%), Positives = 234/520 (45%), Gaps = 66/520 (12%)
Query: 57 QNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEM 116
QN L++ L++ Y K G +++VF + V ++A++ Q G ++ L+ M
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 117 VEKSMYPDEESCSFVLRSCFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELY----EKN 172
+ +P+E + S VL SC +E GK VH +KLG+ V N+++ +Y +
Sbjct: 154 LSHC-FPNEFTLSSVLTSC---RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGA 209
Query: 173 GFLNAHEPLEGMSVTELAYWNNMISQAFESGKM-EECFQLFSRMRKENIQPNSITVINLL 231
A E + L WN+MI+ AF+ + ++ +F RM + + + T++N+
Sbjct: 210 AAYEAWTVFEAIKFKNLVTWNSMIA-AFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNIC 268
Query: 232 RS---TVDL---HLLKIGQALHSLIIVSNLCGELTVNTALLSMYVK-LGSLKDARLMFEK 284
S + DL + K LHSL + S L + V TAL+ +Y + L D +F +
Sbjct: 269 SSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFME 328
Query: 285 MPR-NDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEW 343
M D+V WN +++A+A P+ ++ L + + + PD +T + + L
Sbjct: 329 MSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARH 387
Query: 344 GKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAV 403
+HA VI+ G ++N+LI Y+ C L+ R+FD + + VVSW++M+KA+++
Sbjct: 388 ALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSL 447
Query: 404 HDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXX 463
H Q L +F +M + FI
Sbjct: 448 HGQVDSILPVFQKMDINPDSATFI------------------------------------ 471
Query: 464 ETSLLASYAKCGCIEMARKLFD---EGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQM 520
+LL++ + G +E ++F E + + + +I S+ + + E+ QM
Sbjct: 472 --ALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQM 529
Query: 521 KLSNVKPDQVTFLGLLTACVNSGLVDKGK---EIFKEMVD 557
+ PD V ++ LL +C G GK + KE+V+
Sbjct: 530 PMD---PDAVVWIALLGSCRKHGNTRLGKLAADKLKELVE 566
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 136/296 (45%), Gaps = 24/296 (8%)
Query: 28 FTTSSLLDLCTK--------PQHLQ----QIHARFFLHGLHQNSSLSSKLMDCYTKFGLP 75
F ++LL++C+ P + Q+H+ GL + +++ L+ Y++ L
Sbjct: 259 FDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEM-LE 317
Query: 76 GLSQKVFYFTENP---DSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVL 132
+ F E D V ++ I+ + + + E+ + L+ ++ ++ + PD + S VL
Sbjct: 318 DYTDCYKLFMEMSHCRDIVAWNGIITAFAVY-DPERAIHLFGQLRQEKLSPDWYTFSSVL 376
Query: 133 RSCFS-VSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELA 190
++C V+ +HAQ++K G A ++ NSL+ Y K G L+ + M ++
Sbjct: 377 KACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVV 436
Query: 191 YWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIG-QALHSL 249
WN+M+ G+++ +F +M +I P+S T I LL + ++ G + S+
Sbjct: 437 SWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSM 493
Query: 250 IIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRN-DLVVWNIMVSAYAGNG 304
+L ++ M + +A + ++MP + D VVW ++ + +G
Sbjct: 494 FEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHG 549
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 24/210 (11%)
Query: 344 GKQMHAHVIRNGSDY--QVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAH 401
G +H H++ + Y V + N LI+MY+ C + AR++FD + ++ VVSW+A+I +
Sbjct: 78 GINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGY 137
Query: 402 AVHDQCLEALSLFIEMKLCGTRVDFIIVINILPT-FAKIGALHYVRY-----LHGYXXXX 455
E LF M + + P F L RY +HG
Sbjct: 138 VQAGNEQEGFCLFSSM-----------LSHCFPNEFTLSSVLTSCRYEPGKQVHGLALKL 186
Query: 456 XXXXXXXXETSLLASYAKC---GCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQ 512
++++ Y +C A +F+ K K+++ WNSMI+A+ +
Sbjct: 187 GLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIK--FKNLVTWNSMIAAFQCCNLGKK 244
Query: 513 CFELYNQMKLSNVKPDQVTFLGLLTACVNS 542
++ +M V D+ T L + ++ S
Sbjct: 245 AIGVFMRMHSDGVGFDRATLLNICSSLYKS 274
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 231 bits (590), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 153/523 (29%), Positives = 258/523 (49%), Gaps = 39/523 (7%)
Query: 192 WNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLII 251
WN +I + L M + + + ++ +L++ L +K G +H +
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 252 VSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLE 311
+ L +L + L+ +Y+K G L +R MF++MP+ D V +N M+ Y G + E
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARE 208
Query: 312 LVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYS 371
L M +M I S I+ T G + + + + + + N++ID Y
Sbjct: 209 LFDLMPM-----EMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYV 263
Query: 372 ACNGLNSARRIFDLITDKTVVSWSAMIKAHA----VH------DQC-------------- 407
+ A+ +FD++ + VV+W+ MI +A VH DQ
Sbjct: 264 KHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAG 323
Query: 408 -------LEALSLFIEM-KLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXX 459
+EAL +F +M K D ++ +LP A++G L +H Y
Sbjct: 324 YVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYL 383
Query: 460 XXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQ 519
+L+ Y+KCG I+ A +F EG +K I WN+MI + HG F++ Q
Sbjct: 384 GGKLGVALIDMYSKCGSIQHAMLVF-EG-IENKSIDHWNAMIGGLAIHGLGESAFDMLLQ 441
Query: 520 MKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAG 579
++ ++KPD +TF+G+L AC +SGLV +G F+ M + +P +H+ CMVD+L R+G
Sbjct: 442 IERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSG 501
Query: 580 QIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSN 639
I+ A +IE +P+ + ++ L+AC H + E+ A+ LI N +YVLLSN
Sbjct: 502 SIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSN 561
Query: 640 IYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRV 682
+YA+ G W V ++R+ +++R ++K PGCSW+E +G+VHEF V
Sbjct: 562 MYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 131/542 (24%), Positives = 229/542 (42%), Gaps = 69/542 (12%)
Query: 29 TTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKV------- 81
+T +L C + QIH R G+ +NS+L+++++ + P L+
Sbjct: 14 STIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEY 73
Query: 82 ----FYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFS 137
F F E D +++A++++ S + + L L M+E + D+ S S VL++C
Sbjct: 74 HVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSR 133
Query: 138 VSHEQGKM-VHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNM 195
+ +G M +H + K G+ + ++N L+ LY K G L + + + M + +N+M
Sbjct: 134 LGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSM 193
Query: 196 ISQAFESG---KMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIV 252
I + G E F L K I NS+ I+ T D G + S +
Sbjct: 194 IDGYVKCGLIVSARELFDLMPMEMKNLISWNSM--ISGYAQTSD------GVDIASKLFA 245
Query: 253 SNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAG---------- 302
+L +++ YVK G ++DA+ +F+ MPR D+V W M+ YA
Sbjct: 246 DMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTL 305
Query: 303 ---------------------NGCPKESLELVYCMVR-SGVRPDMFTAIPAISSITQLKH 340
N E+LE+ M + S + PD T + + +I QL
Sbjct: 306 FDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGR 365
Query: 341 TEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKA 400
MH +++ + ALIDMYS C + A +F+ I +K++ W+AMI
Sbjct: 366 LSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGG 425
Query: 401 HAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXX 460
A+H A + ++++ + D I + +L + G + G
Sbjct: 426 LAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVK-----EGLLCFELMRRK 480
Query: 461 XXXETSL------LASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCF 514
E L + ++ G IE+A+ L +E D+I W + ++A S H E F+
Sbjct: 481 HKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVI-WRTFLTACSHHKE-FETG 538
Query: 515 EL 516
EL
Sbjct: 539 EL 540
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/486 (28%), Positives = 251/486 (51%), Gaps = 44/486 (9%)
Query: 209 FQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSM 268
+L+ RM ++++ P+S T +L++++ + G++L + I + + T L+
Sbjct: 856 LELYVRMLRDSVSPSSYTYSSLVKASS--FASRFGESLQAHIWKFGFGFHVKIQTTLIDF 913
Query: 269 YVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTA 328
Y G +++AR +F++MP D + W MVSAY + L DM +A
Sbjct: 914 YSATGRIREARKVFDEMPERDDIAWTTMVSAY------RRVL-------------DMDSA 954
Query: 329 IPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITD 388
QM S+ + N LI+ Y L A +F+ +
Sbjct: 955 ------------NSLANQM--------SEKNEATSNCLINGYMGLGNLEQAESLFNQMPV 994
Query: 389 KTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYL 448
K ++SW+ MIK ++ + + EA+++F +M G D + + ++ A +G L + +
Sbjct: 995 KDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEV 1054
Query: 449 HGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHG 508
H Y ++L+ Y+KCG +E A +F K++ WNS+I + HG
Sbjct: 1055 HMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVF--FNLPKKNLFCWNSIIEGLAAHG 1112
Query: 509 EWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHH 568
+ +++ +M++ +VKP+ VTF+ + TAC ++GLVD+G+ I++ M+D Y + EH+
Sbjct: 1113 FAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHY 1172
Query: 569 ACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEP 628
MV L +AG I EA ++I + +A ++G LL C++H + +AE+A KL+ +EP
Sbjct: 1173 GGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEP 1232
Query: 629 KNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKT-PGCSWLESNGQVHEFRVADQSH 687
N+G Y LL ++YA +W VA++R +R+ G++K PG S + + + H F AD+SH
Sbjct: 1233 MNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSH 1292
Query: 688 PRSVDI 693
S ++
Sbjct: 1293 SASDEV 1298
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/508 (21%), Positives = 212/508 (41%), Gaps = 76/508 (14%)
Query: 33 LLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVI 92
++ C+ P+ L+ A L+Q+ L ++ + T F L+ + P+ +
Sbjct: 779 IIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFV 838
Query: 93 YSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMVHAQIVK 152
Y+A+ + ++L LY M+ S+ P + S ++++ S + G+ + A I K
Sbjct: 839 YNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKAS-SFASRFGESLQAHIWK 897
Query: 153 LGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQL 211
G ++ +L++ Y G + A + + M + W M+S M+ L
Sbjct: 898 FGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSL 957
Query: 212 FSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVK 271
++M ++N E T N L++ Y+
Sbjct: 958 ANQMSEKN--------------------------------------EATSN-CLINGYMG 978
Query: 272 LGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPA 331
LG+L+ A +F +MP D++ W M+ Y+ N +E++ + Y M+ G+ PD T
Sbjct: 979 LGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTV 1038
Query: 332 ISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTV 391
IS+ L E GK++H + ++NG V + +AL+DMYS C L A +F + K +
Sbjct: 1039 ISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNL 1098
Query: 392 VSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGY 451
W+++I+ A H EAL +F +M++ + + + +++ G + R ++
Sbjct: 1099 FCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIY-- 1156
Query: 452 XXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWF 511
S++ Y+ +E + M+ +SK G +
Sbjct: 1157 -------------RSMIDDYSIVSNVEH-----------------YGGMVHLFSKAGLIY 1186
Query: 512 QCFELYNQMKLSNVKPDQVTFLGLLTAC 539
+ EL M+ +P+ V + LL C
Sbjct: 1187 EALELIGNMEF---EPNAVIWGALLDGC 1211
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 194/726 (26%), Positives = 315/726 (43%), Gaps = 139/726 (19%)
Query: 46 IHARFFLHGLHQNSSLS-----SKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNL 100
+HAR L + Q S++ + L+ Y K G ++ +F + V +A+L
Sbjct: 59 VHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGY 118
Query: 101 SQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRS-CFSVSHEQG-----KMVHAQIVKLG 154
+ + L++EM + + S + +L + C E +M +V
Sbjct: 119 VKCRRMNEAWTLFREMPKNVV-----SWTVMLTALCDDGRSEDAVELFDEMPERNVVSWN 173
Query: 155 MDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSR 214
L+RN +E A + + M ++ WN MI E+ MEE LF
Sbjct: 174 TLVTGLIRNGDME--------KAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGD 225
Query: 215 MRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGS 274
M ++N+ T+++ Y + G
Sbjct: 226 MSEKNV---------------------------------------VTWTSMVYGYCRYGD 246
Query: 275 LKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVR--SGVRPDMFTAIPAI 332
+++A +F +MP ++V W M+S +A N +E+L L M + V P+ T I
Sbjct: 247 VREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLA 306
Query: 333 SSITQL--KHTEWGKQMHAHVIRNG---SDYQVSVHNALIDMYSACNGLNSARRI----F 383
+ L + G+Q+HA VI NG D+ + +L+ MY++ + SA+ + F
Sbjct: 307 YACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESF 366
Query: 384 DLITDKTV--------------------------VSWSAMIKAH--------------AV 403
DL + + VSW++MI + +
Sbjct: 367 DLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKL 426
Query: 404 HDQ-----------------CLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVR 446
HD+ EA SL +M CG + +L + L +
Sbjct: 427 HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGK 486
Query: 447 YLHGYXXXXXX--XXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAY 504
++H + SL++ YAKCG IE A ++F K KD ++WNSMI
Sbjct: 487 HIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIF--AKMVQKDTVSWNSMIMGL 544
Query: 505 SKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPS 564
S HG + L+ +M S KP+ VTFLG+L+AC +SGL+ +G E+FK M + Y QP
Sbjct: 545 SHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPG 604
Query: 565 QEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPR----LAEVAA 620
+H+ M+DLLGRAG++ EA + I +P D VYG LL C ++ + +AE AA
Sbjct: 605 IDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAA 664
Query: 621 QKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEF 680
+L+ ++P NA +V L N+YA G+ D +MR + +G+KKTPGCSW+ NG+ + F
Sbjct: 665 MRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVF 724
Query: 681 RVADQS 686
D+S
Sbjct: 725 LSGDKS 730
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 144/475 (30%), Positives = 247/475 (52%), Gaps = 28/475 (5%)
Query: 238 HLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSL---KD---ARLMFEKMPRNDLV 291
HLL+I +H L ++ ++S V++ SL KD AR + +
Sbjct: 28 HLLQIHGQIH--------LSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPS 79
Query: 292 VWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHV 351
WN++ Y+ + P ES+ + M R G++P+ T + + G+Q+ V
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 352 IRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEAL 411
+++G D+ V V N LI +Y C + AR++FD +T++ VVSW++++ A + +
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 412 SLFIEM---KLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLL 468
F EM + C +++++ A G L + +H T+L+
Sbjct: 200 ECFCEMIGKRFCPDETTMVVLLS-----ACGGNLSLGKLVHSQVMVRELELNCRLGTALV 254
Query: 469 ASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQM-KLSNVKP 527
YAK G +E AR +F+ + K++ W++MI +++G + +L+++M K S+V+P
Sbjct: 255 DMYAKSGGLEYARLVFE--RMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRP 312
Query: 528 DQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKI 587
+ VTFLG+L AC ++GLVD G + F EM ++ +P H+ MVD+LGRAG+++EA
Sbjct: 313 NYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDF 372
Query: 588 IETVPLNSDARVYGPLLSACKMH---SDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAA 644
I+ +P DA V+ LLSAC +H D + E ++LI +EPK +GN V+++N +A A
Sbjct: 373 IKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEA 432
Query: 645 GKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILKV 699
W + A++R +++ +KK G S LE G H F V IY +L +
Sbjct: 433 RMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLDL 487
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 189/392 (48%), Gaps = 15/392 (3%)
Query: 23 FQTRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVF 82
F++R L LC+ +HL QIH + L L +S + S+L+ + L+
Sbjct: 9 FKSRKHQCLIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFART 68
Query: 83 YFTENPDSV--IYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFS-VS 139
+ DS ++ + R S +++++Y EM + + P++ + F+L++C S +
Sbjct: 69 LLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLG 128
Query: 140 HEQGKMVHAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQ 198
G+ + +++K G D V N+L+ LY +A + + M+ + WN++++
Sbjct: 129 LTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTA 188
Query: 199 AFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGE 258
E+GK+ F+ F M + P+ T++ LL + L +G+ +HS ++V L
Sbjct: 189 LVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELN 246
Query: 259 LTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVR 318
+ TAL+ MY K G L+ ARL+FE+M ++ W+ M+ A G +E+L+L M++
Sbjct: 247 CRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMK 306
Query: 319 -SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVH-NALIDMYSACNGL 376
S VRP+ T + + + + + G + + + + +H A++D+ L
Sbjct: 307 ESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRL 366
Query: 377 NSARRIFDLIT----DKTVVSWSAMIKAHAVH 404
N A +D I + V W ++ A ++H
Sbjct: 367 NEA---YDFIKKMPFEPDAVVWRTLLSACSIH 395
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 181/422 (42%), Gaps = 55/422 (13%)
Query: 128 CSFVLRSCFSVSHEQGKMVHAQI--VKLGMDAF---DLVRNSLVELYEKNGFLNAHEPLE 182
C L+ C S+ H +H QI L D+F +LVR S + L + F A L
Sbjct: 16 CLIFLKLCSSIKHLL--QIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAF--ARTLLL 71
Query: 183 GMSVTELAYWNNMISQAFESGKME-ECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLK 241
S + + WN M+S+ + S E ++S M++ I+PN +T LL++ L
Sbjct: 72 HSSDSTPSTWN-MLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLT 130
Query: 242 IGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYA 301
G+ + ++ ++ V L+ +Y DAR +F++M ++V WN +++A
Sbjct: 131 AGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALV 190
Query: 302 GNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVS 361
NG E M+ PD T + +S+ + GK +H+ V+ +
Sbjct: 191 ENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCR 248
Query: 362 VHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIE-MKLC 420
+ AL+DMY+ GL AR +F+ + DK V +WSAMI A + EAL LF + MK
Sbjct: 249 LGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKES 308
Query: 421 GTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMA 480
R +++ + + L + + G ++
Sbjct: 309 SVRPNYVTFLGV-----------------------------------LCACSHTGLVDDG 333
Query: 481 RKLFDEGKSSHKD---IIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLT 537
K F E + HK +I + +M+ + G + ++ +M +PD V + LL+
Sbjct: 334 YKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPF---EPDAVVWRTLLS 390
Query: 538 AC 539
AC
Sbjct: 391 AC 392
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 166/590 (28%), Positives = 281/590 (47%), Gaps = 41/590 (6%)
Query: 130 FVLRSCFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEK------------------ 171
V RS S S K+VHAQ+++ G N ++LY K
Sbjct: 10 LVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKN 69
Query: 172 -------------NGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRK 217
NG+LN A + + M ++ WN MIS G E ++F M++
Sbjct: 70 TITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQR 129
Query: 218 ENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCG-ELTVNTALLSMYVKLGSLK 276
I+P T ++L S V ++ G+ +H I S + L V +++ MY +LG
Sbjct: 130 WEIRPTEFT-FSILASLVTC--VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFD 186
Query: 277 DARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSIT 336
A +F M D+V WN ++ + + +G + +L+ + M ++PD +T +S +
Sbjct: 187 YALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICS 246
Query: 337 QLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSA 396
L+ GKQ A I+ G V A IDM+S CN L+ + ++F + V ++
Sbjct: 247 DLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNS 306
Query: 397 MIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXX 456
MI +++ H +AL LFI R D ++L + + L + +H
Sbjct: 307 MIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLG 365
Query: 457 XXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFEL 516
TSL+ Y K G +++A +F K+ KD+I WN++I +++ + +
Sbjct: 366 FDLDTAVATSLMEMYFKTGSVDLAMGVF--AKTDGKDLIFWNTVIMGLARNSRAVESLAI 423
Query: 517 YNQMKLS-NVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLL 575
+NQ+ ++ ++KPD+VT +G+L AC +G V++G +IF M +G P EH+AC+++LL
Sbjct: 424 FNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELL 483
Query: 576 GRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYV 635
R G I+EA I + +P + ++ P+L A D RLAE A+ ++ EPK++ Y+
Sbjct: 484 CRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYL 543
Query: 636 LLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQ 685
+L IY +W+ K+R + + LK G S + V F ADQ
Sbjct: 544 VLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFE-ADQ 592
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 105/209 (50%), Gaps = 5/209 (2%)
Query: 28 FTTSSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
+T S ++ +C+ + L +Q A G NS + +D ++K S K+F
Sbjct: 236 YTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRE 295
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGK 144
E DSV+ ++++ + S E L L+ + +S+ PD+ + S VL S +V + G
Sbjct: 296 LEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDHGA 355
Query: 145 MVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESG 203
VH+ ++KLG D V SL+E+Y K G ++ A +L +WN +I +
Sbjct: 356 DVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNS 415
Query: 204 KMEECFQLFSR-MRKENIQPNSITVINLL 231
+ E +F++ + ++++P+ +T++ +L
Sbjct: 416 RAVESLAIFNQLLMNQSLKPDRVTLMGIL 444
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 154/568 (27%), Positives = 276/568 (48%), Gaps = 11/568 (1%)
Query: 29 TTSSLLDLCTKPQ---HLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFT 85
T S+LL+ C + + H +Q+H ++GL N L +KL+ YT G +QKVF +
Sbjct: 113 TFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDES 172
Query: 86 ENPDSVIYSAILRN--LSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQ 142
+ + ++A+LR +S ++ L + EM E + + S S V +S S Q
Sbjct: 173 TSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQ 232
Query: 143 GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFE 201
G HA +K G+ ++ SLV++Y K G + A + + ++ W MI+
Sbjct: 233 GLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAH 292
Query: 202 SGKMEECFQLFSRM-RKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVS-NLCGEL 259
+ + E LF M +E I PNS+ + +L D+ LK+G+ +H+ ++ S N +
Sbjct: 293 NKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQP 352
Query: 260 TVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRS 319
V++ L+ +Y K G + R +F + + + W ++S YA NG ++L + M +
Sbjct: 353 FVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQE 412
Query: 320 GVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSA 379
G RPD+ T + +L+ + GK++H + ++N VS+ +L+ MYS C
Sbjct: 413 GFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYP 472
Query: 380 RRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKI 439
R+FD + + V +W+AMI + + + +F M L R D + + +L + +
Sbjct: 473 IRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDL 532
Query: 440 GALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNS 499
AL + LHG+ ++ Y KCG + A FD + K + W +
Sbjct: 533 KALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDA--VAVKGSLTWTA 590
Query: 500 MISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLY 559
+I AY + + + QM P+ TF +L+ C +G VD+ F M+ +Y
Sbjct: 591 IIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMY 650
Query: 560 GYQPSQEHHACMVDLLGRAGQIDEASKI 587
QPS+EH++ +++LL R G+++EA ++
Sbjct: 651 NLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 163/352 (46%), Gaps = 8/352 (2%)
Query: 205 MEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTA 264
+E + + + I N+ T LL + V L G+ +H I ++ L + T
Sbjct: 92 LEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTK 151
Query: 265 LLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMV--SAYAGNGCPKESLELVYCMVRSGVR 322
L+ MY GS+KDA+ +F++ +++ WN ++ + +G ++ L M GV
Sbjct: 152 LVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVD 211
Query: 323 PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRI 382
++++ S G + HA I+NG V + +L+DMY C + ARR+
Sbjct: 212 LNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRV 271
Query: 383 FDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRV--DFIIVINILPTFAKIG 440
FD I ++ +V W AMI A + + EAL LF M + ++ + +I+ ILP +
Sbjct: 272 FDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTM-ISEEKIYPNSVILTTILPVLGDVK 330
Query: 441 ALHYVRYLHGYXXXXXXXXXXX-XETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNS 499
AL + +H + + L+ Y KCG + R++F K ++ I+W +
Sbjct: 331 ALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSK--QRNAISWTA 388
Query: 500 MISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEI 551
++S Y+ +G + Q M+ +PD VT +L C + +GKEI
Sbjct: 389 LMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 139/323 (43%), Gaps = 40/323 (12%)
Query: 344 GKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAV 403
GKQ+H H+ NG + + L+ MY+AC + A+++FD T V SW+A+++ +
Sbjct: 130 GKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVI 189
Query: 404 --HDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXX 461
+ + LS F EM+ G ++ + N+ +FA AL H
Sbjct: 190 SGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSV 249
Query: 462 XXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQM- 520
+TSL+ Y KCG + +AR++FDE +DI+ W +MI+ + + ++ L+ M
Sbjct: 250 FLKTSLVDMYFKCGKVGLARRVFDE--IVERDIVVWGAMIAGLAHNKRQWEALGLFRTMI 307
Query: 521 KLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQ 580
+ P+ V +L + + GKE+ ++ Y H+ ++DL + G
Sbjct: 308 SEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGD 367
Query: 581 IDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNI 640
+ ++ YG + +NA ++ L +
Sbjct: 368 MASGRRVF-----------YGS------------------------KQRNAISWTALMSG 392
Query: 641 YAAAGKWDKVAKMRSFLRDRGLK 663
YAA G++D+ + +++ G +
Sbjct: 393 YAANGRFDQALRSIVWMQQEGFR 415
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 213/384 (55%), Gaps = 4/384 (1%)
Query: 318 RSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLN 377
R G D + A+ S + G H ++ G V + ++L+ +Y +
Sbjct: 113 RDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVE 172
Query: 378 SARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFA 437
+A ++F+ + ++ VVSW+AMI A + L L+ +M+ + + +L
Sbjct: 173 NAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACT 232
Query: 438 KIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAW 497
GAL R +H SL++ Y KCG ++ A ++FD+ S+KD+++W
Sbjct: 233 GSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQ--FSNKDVVSW 290
Query: 498 NSMISAYSKHGEWFQCFELYN-QMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMV 556
NSMI+ Y++HG Q EL+ M S KPD +T+LG+L++C ++GLV +G++ F M
Sbjct: 291 NSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA 350
Query: 557 DLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLA 616
+ +G +P H++C+VDLLGR G + EA ++IE +P+ ++ ++G LL +C++H D
Sbjct: 351 E-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTG 409
Query: 617 EVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQ 676
AA++ + +EP A +V L+N+YA+ G W + A +R ++D+GLK PGCSW+E N
Sbjct: 410 IRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNY 469
Query: 677 VHEFRVADQSHPRSVDIYSILKVM 700
V F+ D S+ R ++I +L +
Sbjct: 470 VFMFKAEDGSNCRMLEIVHVLHCL 493
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 140/285 (49%), Gaps = 4/285 (1%)
Query: 124 DEESCSFVLRSC-FSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPL 181
D S +RSC + G H +K G + + +SLV LY +G + NA++
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 182 EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLK 241
E M + W MIS + +++ C +L+S+MRK PN T LL + L
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 242 IGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYA 301
G+++H + L L ++ +L+SMY K G LKDA +F++ D+V WN M++ YA
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYA 298
Query: 302 GNGCPKESLELVYCMV-RSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQV 360
+G +++EL M+ +SG +PD T + +SS + G++ + +G ++
Sbjct: 299 QHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPEL 358
Query: 361 SVHNALIDMYSACNGLNSARRIFDLITDK-TVVSWSAMIKAHAVH 404
+ ++ L+D+ L A + + + K V W +++ + VH
Sbjct: 359 NHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVH 403
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 150/333 (45%), Gaps = 8/333 (2%)
Query: 181 LEGMSVTE---LAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDL 237
G +++E L+ N +S E +E+ S ++++ ++ + + +RS
Sbjct: 77 FRGQAISEDFDLSRTKNGVSSVLEEVMLEDSS---SSVKRDGWSFDAYGLSSAVRSCGLN 133
Query: 238 HLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMV 297
+ G H L + ++ + ++L+ +Y G +++A +FE+MP ++V W M+
Sbjct: 134 RDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMI 193
Query: 298 SAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSD 357
S +A L+L M +S P+ +T +S+ T G+ +H + G
Sbjct: 194 SGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLK 253
Query: 358 YQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLF-IE 416
+ + N+LI MY C L A RIFD ++K VVSW++MI +A H ++A+ LF +
Sbjct: 254 SYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELM 313
Query: 417 MKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGC 476
M GT+ D I + +L + G + R + L+ + G
Sbjct: 314 MPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGL 373
Query: 477 IEMARKLFDEGKSSHKDIIAWNSMISAYSKHGE 509
++ A +L + +I W S++ + HG+
Sbjct: 374 LQEALELIENMPMKPNSVI-WGSLLFSCRVHGD 405
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 124/248 (50%), Gaps = 4/248 (1%)
Query: 54 GLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLY 113
G + L S L+ Y G + KVF + V ++A++ +Q + L LY
Sbjct: 150 GFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLY 209
Query: 114 KEMVEKSMYPDEESCSFVLRSCF-SVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKN 172
+M + + P++ + + +L +C S + QG+ VH Q + +G+ ++ + NSL+ +Y K
Sbjct: 210 SKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKC 269
Query: 173 GFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFS-RMRKENIQPNSITVINL 230
G L +A + S ++ WN+MI+ + G + +LF M K +P++IT + +
Sbjct: 270 GDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGV 329
Query: 231 LRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMP-RND 289
L S L+K G+ +L+ L EL + L+ + + G L++A + E MP + +
Sbjct: 330 LSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPN 389
Query: 290 LVVWNIMV 297
V+W ++
Sbjct: 390 SVIWGSLL 397
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 207/381 (54%), Gaps = 4/381 (1%)
Query: 292 VWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHV 351
+WN ++ +Y + P +++++ MVRS V PD ++ I + Q+ GK++H+
Sbjct: 84 LWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVA 143
Query: 352 IRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEAL 411
+R G + I +Y +AR++FD ++ + SW+A+I + EA+
Sbjct: 144 VRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAV 203
Query: 412 SLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHG--YXXXXXXXXXXXXETSLLA 469
+F++MK G D ++++ + +G L LH SL+
Sbjct: 204 EMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLID 263
Query: 470 SYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQ 529
Y KCG +++A +F+E + +++++W+SMI Y+ +G + E + QM+ V+P++
Sbjct: 264 MYGKCGRMDLASHIFEEMR--QRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNK 321
Query: 530 VTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIE 589
+TF+G+L+ACV+ GLV++GK F M + +P H+ C+VDLL R GQ+ EA K++E
Sbjct: 322 ITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVE 381
Query: 590 TVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDK 649
+P+ + V+G L+ C+ D +AE A ++ +EP N G YV+L+N+YA G W
Sbjct: 382 EMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKD 441
Query: 650 VAKMRSFLRDRGLKKTPGCSW 670
V ++R ++ + + K P S+
Sbjct: 442 VERVRKLMKTKKVAKIPAYSY 462
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 125/244 (51%), Gaps = 2/244 (0%)
Query: 192 WNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLII 251
WNN++ + Q++ M + + P+ ++ ++++ V +H +G+ LHS+ +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 252 VSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLE 311
G+ + +++Y K G ++AR +F++ P L WN ++ G E++E
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 312 LVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVH--NALIDM 369
+ M RSG+ PD FT + +S L Q+H V++ ++ + + N+LIDM
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 370 YSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIV 429
Y C ++ A IF+ + + VVSWS+MI +A + LEAL F +M+ G R + I
Sbjct: 265 YGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITF 324
Query: 430 INIL 433
+ +L
Sbjct: 325 VGVL 328
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 182/406 (44%), Gaps = 44/406 (10%)
Query: 6 NLFHLLN--IRKIPYIVAPF--QTRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSL 61
+FH LN + V P Q R ++LL CT +++IH F
Sbjct: 22 TIFHRLNHFVTTSSSSVTPLSPQDRNKLLATLLSNCTSLARVRRIHGDIF---------- 71
Query: 62 SSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSM 121
S+++D Y P + +++ I+R+ + + +Y MV ++
Sbjct: 72 RSRILDQY------------------PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTV 113
Query: 122 YPDEESCSFVLRSCFSV-SHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNG-FLNAHE 179
PD S V+++ + GK +H+ V+LG + + + LY K G F NA +
Sbjct: 114 LPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARK 173
Query: 180 PLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHL 239
+ +L WN +I +G+ E ++F M++ ++P+ T++++ S L
Sbjct: 174 VFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGD 233
Query: 240 LKIGQALHSLIIVSNL--CGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMV 297
L + LH ++ + ++ + +L+ MY K G + A +FE+M + ++V W+ M+
Sbjct: 234 LSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMI 293
Query: 298 SAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSD 357
YA NG E+LE M GVRP+ T + +S+ E GK A + S+
Sbjct: 294 VGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMM---KSE 350
Query: 358 YQ----VSVHNALIDMYSACNGLNSARRIFDLITDK-TVVSWSAMI 398
++ +S + ++D+ S L A+++ + + K V+ W ++
Sbjct: 351 FELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLM 396
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 226 bits (575), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 231/417 (55%), Gaps = 5/417 (1%)
Query: 255 LCGELTVNTALLSMYVKLGSLKDARL-MFEKMPRNDLVVWNIMVSAYAGNGCPKESLELV 313
L + +++ L+ Y KL L L +F MP ++ WNI++ ++ +G +S++L
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 314 YCMVR-SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSA 372
M R S VRPD FT + + + + + G +H ++ G + V +AL+ MY
Sbjct: 122 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVD 181
Query: 373 CNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINI 432
L AR++FD + + V ++AM + + + L++F EM G +D ++++++
Sbjct: 182 MGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSL 241
Query: 433 LPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHK 492
L ++GAL + + +HG+ ++ Y KC ++ A +F S +
Sbjct: 242 LMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVN--MSRR 299
Query: 493 DIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIF 552
D+I+W+S+I Y G+ F+L+++M ++P+ VTFLG+L+AC + GLV+K F
Sbjct: 300 DVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYF 359
Query: 553 KEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSD 612
+ M + Y P +H+A + D + RAG ++EA K +E +P+ D V G +LS CK++ +
Sbjct: 360 RLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGN 418
Query: 613 PRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCS 669
+ E A++LI ++P+ A YV L+ +Y+AAG++D+ +R +++++ + K PGCS
Sbjct: 419 VEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 137/285 (48%), Gaps = 6/285 (2%)
Query: 55 LHQNSSLSSKLMDCYTKFG-LPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLY 113
L+ N LSSKL+ Y+K L S VF+ + ++ I+ S+ G K++ L+
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 114 KEMVEKS-MYPDEESCSFVLRSCFSVSHE--QGKMVHAQIVKLGMDAFDLVRNSLVELYE 170
M +S + PD+ + +LR+C S S E G ++H +KLG + V ++LV +Y
Sbjct: 122 LRMWRESCVRPDDFTLPLILRAC-SASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYV 180
Query: 171 KNG-FLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVIN 229
G L+A + + M V + + M + G+ +F M +S+ +++
Sbjct: 181 DMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVS 240
Query: 230 LLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRND 289
LL + L LK G+++H I C L + A+ MYVK L A +F M R D
Sbjct: 241 LLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRD 300
Query: 290 LVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISS 334
++ W+ ++ Y +G S +L M++ G+ P+ T + +S+
Sbjct: 301 VISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSA 345
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 13/268 (4%)
Query: 28 FTTSSLLDLCTKPQHLQQ---IHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
FT +L C+ + + IH G + +SS L+ Y G ++K+F
Sbjct: 135 FTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDD 194
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQG 143
DSV+Y+A+ Q GE L +++EM D +L +C + + G
Sbjct: 195 MPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHG 254
Query: 144 KMVHAQIVK----LGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQ 198
K VH ++ LG++ + N++ ++Y K L+ AH MS ++ W+++I
Sbjct: 255 KSVHGWCIRRCSCLGLN----LGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILG 310
Query: 199 AFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGE 258
G + F+LF M KE I+PN++T + +L + L++ L+ N+ E
Sbjct: 311 YGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPE 370
Query: 259 LTVNTALLSMYVKLGSLKDARLMFEKMP 286
L ++ + G L++A E MP
Sbjct: 371 LKHYASVADCMSRAGLLEEAEKFLEDMP 398
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 225 bits (574), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 147/510 (28%), Positives = 245/510 (48%), Gaps = 70/510 (13%)
Query: 192 WNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLII 251
W + I+ +G++ E + FS M ++PN IT I LL
Sbjct: 39 WTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSG------------------ 80
Query: 252 VSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLE 311
CG+ T + LG L + RN ++V ++ Y+ G K++
Sbjct: 81 ----CGDFTSGSE------ALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKA-R 129
Query: 312 LVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYS 371
LV F + +S+T W N +ID Y
Sbjct: 130 LV------------FDYMEDKNSVT------W--------------------NTMIDGYM 151
Query: 372 ACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVIN 431
+++A ++FD + ++ ++SW+AMI EAL F EM++ G + D++ +I
Sbjct: 152 RSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIA 211
Query: 432 ILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSH 491
L +GAL + ++H Y SL+ Y +CGC+E AR++F
Sbjct: 212 ALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFY--NMEK 269
Query: 492 KDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEI 551
+ +++WNS+I ++ +G + + +M+ KPD VTF G LTAC + GLV++G
Sbjct: 270 RTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRY 329
Query: 552 FKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHS 611
F+ M Y P EH+ C+VDL RAG++++A K+++++P+ + V G LL+AC H
Sbjct: 330 FQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
Query: 612 DP-RLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSW 670
+ LAE + L ++ K+ NYV+LSN+YAA GKW+ +KMR ++ GLKK PG S
Sbjct: 390 NNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSS 449
Query: 671 LESNGQVHEFRVADQSHPRSVDIYSILKVM 700
+E + +H F D +H + I +L+++
Sbjct: 450 IEIDDCMHVFMAGDNAHVETTYIREVLELI 479
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 123/248 (49%), Gaps = 9/248 (3%)
Query: 141 EQGKMVHAQIVKLGM-DAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQ 198
++G+ A++V M D + N++++ Y ++G + NA + + M +L W MI+
Sbjct: 121 KRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMING 180
Query: 199 AFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGE 258
+ G EE F M+ ++P+ + +I L + +L L G +H ++ +
Sbjct: 181 FVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNN 240
Query: 259 LTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVR 318
+ V+ +L+ +Y + G ++ AR +F M + +V WN ++ +A NG ESL M
Sbjct: 241 VRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQE 300
Query: 319 SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSV----HNALIDMYSACN 374
G +PD T A+++ + + E G + + +++ DY++S + L+D+YS
Sbjct: 301 KGFKPDAVTFTGALTACSHVGLVEEGLR-YFQIMK--CDYRISPRIEHYGCLVDLYSRAG 357
Query: 375 GLNSARRI 382
L A ++
Sbjct: 358 RLEDALKL 365
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 113/247 (45%), Gaps = 5/247 (2%)
Query: 57 QNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEM 116
+NS + ++D Y + G + K+F D + ++A++ + G E+ L ++EM
Sbjct: 138 KNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREM 197
Query: 117 VEKSMYPDEESCSFVLRSCFSVSHEQ-GKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL 175
+ PD + L +C ++ G VH ++ V NSL++LY + G +
Sbjct: 198 QISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCV 257
Query: 176 N-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRST 234
A + M + WN++I +G E F +M+++ +P+++T L +
Sbjct: 258 EFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTAC 317
Query: 235 VDLHLLKIGQALHSLIIVS-NLCGELTVNTALLSMYVKLGSLKDARLMFEKMPR--NDLV 291
+ L++ G ++ + + L+ +Y + G L+DA + + MP N++V
Sbjct: 318 SHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVV 377
Query: 292 VWNIMVS 298
+ +++ +
Sbjct: 378 IGSLLAA 384
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 37/235 (15%)
Query: 387 TDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKI--GALHY 444
T +T VSW++ I + + EA F +M L G + I I +L G+
Sbjct: 32 TSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEAL 91
Query: 445 VRYLHGYX-XXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISA 503
LHGY T+++ Y+K G + AR +FD + K+ + WN+MI
Sbjct: 92 GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMED--KNSVTWNTMIDG 149
Query: 504 YSKHGEWFQCFELYN-------------------------------QMKLSNVKPDQVTF 532
Y + G+ ++++ +M++S VKPD V
Sbjct: 150 YMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAI 209
Query: 533 LGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKI 587
+ L AC N G + G + + ++ ++ + ++DL R G ++ A ++
Sbjct: 210 IAALNACTNLGALSFGLWVHRYVLS-QDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/406 (31%), Positives = 222/406 (54%), Gaps = 23/406 (5%)
Query: 281 MFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMV------RSG-VRPDMFTAIPAIS 333
+ ++P + ++N ++S+ N ++ L + + RS VRP+ FT P++
Sbjct: 62 ILRQIPNPSVFLYNTLISSIVSNHNSTQT-HLAFSLYDQILSSRSNFVRPNEFT-YPSLF 119
Query: 334 SITQLKHTEW---GKQMHAHVIR--NGSDYQVSVHNALIDMYSACNGLNSARRIFDLITD 388
+ +W G+ +HAHV++ ++ V AL+ Y+ C L AR +F+ I +
Sbjct: 120 KASGFD-AQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIRE 178
Query: 389 KTVVSWSAMIKAHAVH---DQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYV 445
+ +W+ ++ A+A D E L LF+ M++ R + + ++ ++ + A +G
Sbjct: 179 PDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQV---RPNELSLVALIKSCANLGEFVRG 235
Query: 446 RYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYS 505
+ H Y TSL+ Y+KCGC+ ARK+FDE S +D+ +N+MI +
Sbjct: 236 VWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDE--MSQRDVSCYNAMIRGLA 293
Query: 506 KHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQ 565
HG + ELY + + PD TF+ ++AC +SGLVD+G +IF M +YG +P
Sbjct: 294 VHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKV 353
Query: 566 EHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLIN 625
EH+ C+VDLLGR+G+++EA + I+ +P+ +A ++ L + + H D E+A + L+
Sbjct: 354 EHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLG 413
Query: 626 MEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWL 671
+E +N+GNYVLLSNIYA +W V K R ++D + K+PG S L
Sbjct: 414 LEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTL 459
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 184/408 (45%), Gaps = 32/408 (7%)
Query: 19 IVAPFQTRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLS 78
+ +P ++ +L+ C Q+L+QIHA+ GL ++ SKL+ + L +
Sbjct: 1 MTSPSTSKNHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCL-SYA 59
Query: 79 QKVFYFTENPDSVIYSAILRNLSQFGEHEKT---LFLYKEMVEKS---MYPDEESCSFVL 132
+ NP +Y+ ++ ++ +T LY +++ + P+E F
Sbjct: 60 LSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNE----FTY 115
Query: 133 RSCFSVS------HEQGKMVHAQIVK----LGMDAFDLVRNSLVELYEKNGFLN-AHEPL 181
S F S H G+ +HA ++K + D F V+ +LV Y G L A
Sbjct: 116 PSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRF--VQAALVGFYANCGKLREARSLF 173
Query: 182 EGMSVTELAYWNNMISQAFESGKM---EECFQLFSRMRKENIQPNSITVINLLRSTVDLH 238
E + +LA WN +++ S ++ EE LF RM+ ++PN ++++ L++S +L
Sbjct: 174 ERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLG 230
Query: 239 LLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVS 298
G H ++ +NL V T+L+ +Y K G L AR +F++M + D+ +N M+
Sbjct: 231 EFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIR 290
Query: 299 AYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQM-HAHVIRNGSD 357
A +G +E +EL ++ G+ PD T + IS+ + + G Q+ ++ G +
Sbjct: 291 GLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIE 350
Query: 358 YQVSVHNALIDMYSACNGLNSARR-IFDLITDKTVVSWSAMIKAHAVH 404
+V + L+D+ L A I + W + + + H
Sbjct: 351 PKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTH 398
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 230/430 (53%), Gaps = 14/430 (3%)
Query: 272 LGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG------VRPDM 325
G L A +F +P+ WN ++ +AG+ P + M++ R D
Sbjct: 50 FGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDA 109
Query: 326 FTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDL 385
T + + + + Q+H + R G + L+D YS L SA ++FD
Sbjct: 110 LTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE 169
Query: 386 ITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYV 445
+ + V SW+A+I ++ EA+ L+ M+ G R + V+ L + +G +
Sbjct: 170 MPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEG 229
Query: 446 RYL-HGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAY 504
+ HGY + + Y+KCG ++ A ++F E + K ++ WN+MI+ +
Sbjct: 230 ENIFHGYSNDNVIV-----SNAAIDMYSKCGFVDKAYQVF-EQFTGKKSVVTWNTMITGF 283
Query: 505 SKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPS 564
+ HGE + E++++++ + +KPD V++L LTAC ++GLV+ G +F M G + +
Sbjct: 284 AVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMA-CKGVERN 342
Query: 565 QEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLI 624
+H+ C+VDLL RAG++ EA II ++ + D ++ LL A +++SD +AE+A++++
Sbjct: 343 MKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIK 402
Query: 625 NMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVAD 684
M N G++VLLSN+YAA G+W V ++R + + +KK PG S++E+ G +HEF +D
Sbjct: 403 EMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSD 462
Query: 685 QSHPRSVDIY 694
+SH + +IY
Sbjct: 463 KSHEQWREIY 472
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 202/431 (46%), Gaps = 22/431 (5%)
Query: 32 SLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMD--CYTKFGLPGLSQKVFYFTENPD 89
+++ C ++Q+ + F G Q+S L S+L++ + FG + ++F + P
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67
Query: 90 SVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYP------DEESCSFVLRSCF-SVSHEQ 142
+ ++AI+R + Y+ M+++S D +CSF L++C ++
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 143 GKMVHAQIVKLGMDAFDLVRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFE 201
+H QI + G+ A L+ +L++ Y KNG ++A++ + M V ++A WN +I+
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVS 187
Query: 202 SGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTV 261
+ E +L+ RM E I+ + +TV+ L + L +K G+ + N + V
Sbjct: 188 GNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDN----VIV 243
Query: 262 NTALLSMYVKLGSLKDARLMFEKMP-RNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG 320
+ A + MY K G + A +FE+ + +V WN M++ +A +G +LE+ + +G
Sbjct: 244 SNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNG 303
Query: 321 VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSAR 380
++PD + + A+++ E+G + ++ G + + + ++D+ S L A
Sbjct: 304 IKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAH 363
Query: 381 RIF---DLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTR--VDFIIVINILPT 435
I +I D V W +++ A ++ A E+K G DF+++ N+
Sbjct: 364 DIICSMSMIPDP--VLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAA 421
Query: 436 FAKIGALHYVR 446
+ + VR
Sbjct: 422 QGRWKDVGRVR 432
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 219/410 (53%), Gaps = 9/410 (2%)
Query: 294 NIMVSAYAGNGCPKESLELVYCMVRSGVRP-DMFTAIPAISSITQLKHTEWGKQMHAHVI 352
N M+ A++ + P E L + R+ P + ++ A+ + G Q+H +
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 353 RNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALS 412
+G + L+D+YS C A ++FD I + VSW+ + + + + + L
Sbjct: 141 SDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLV 200
Query: 413 LFIEMK----LCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLL 468
LF +MK C + D + + L A +GAL + + +H + +L+
Sbjct: 201 LFDKMKNDVDGC-VKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLV 259
Query: 469 ASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPD 528
+ Y++CG ++ A ++F + +++++W ++IS + +G + E +N+M + P+
Sbjct: 260 SMYSRCGSMDKAYQVFYGMR--ERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPE 317
Query: 529 QVTFLGLLTACVNSGLVDKGKEIFKEM-VDLYGYQPSQEHHACMVDLLGRAGQIDEASKI 587
+ T GLL+AC +SGLV +G F M + +P+ H+ C+VDLLGRA +D+A +
Sbjct: 318 EQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSL 377
Query: 588 IETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKW 647
I+++ + D+ ++ LL AC++H D L E LI ++ + AG+YVLL N Y+ GKW
Sbjct: 378 IKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKW 437
Query: 648 DKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSIL 697
+KV ++RS ++++ + PGCS +E G VHEF V D SHPR +IY +L
Sbjct: 438 EKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKML 487
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 192/436 (44%), Gaps = 24/436 (5%)
Query: 32 SLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLP---GLSQKVFYFTENP 88
SL+ T HL+QIHA L +NS + + +P S +VF NP
Sbjct: 16 SLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNP 75
Query: 89 DSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYP-DEESCSFVLRSCFSVSHEQGKM-V 146
+ ++R S + L++ + S P + S SF L+ C G + +
Sbjct: 76 TLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQI 135
Query: 147 HAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAFESGKM 205
H +I G + L+ +L++LY +A + + + + WN + S + +
Sbjct: 136 HGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRT 195
Query: 206 EECFQLFSRMRKE---NIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN 262
+ LF +M+ + ++P+ +T + L++ +L L G+ +H I + L G L ++
Sbjct: 196 RDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLS 255
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
L+SMY + GS+ A +F M ++V W ++S A NG KE++E M++ G+
Sbjct: 256 NTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGIS 315
Query: 323 PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSV----HNALIDMYSACNGLNS 378
P+ T +S+ + G M +R+G ++++ + ++D+ L+
Sbjct: 316 PEEQTLTGLLSACSHSGLVAEG-MMFFDRMRSG-EFKIKPNLHHYGCVVDLLGRARLLDK 373
Query: 379 ARRIF---DLITDKTVVSWSAMIKAHAVHDQC---LEALSLFIEMKLCGTRVDFIIVINI 432
A + ++ D T+ W ++ A VH +S IE+K D+++++N
Sbjct: 374 AYSLIKSMEMKPDSTI--WRTLLGACRVHGDVELGERVISHLIELK-AEEAGDYVLLLNT 430
Query: 433 LPTFAKIGALHYVRYL 448
T K + +R L
Sbjct: 431 YSTVGKWEKVTELRSL 446
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 183/321 (57%), Gaps = 6/321 (1%)
Query: 379 ARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEM-KLCGTRVDFIIVINILPTFA 437
A+++ +D+ V++W+ MI + + Q EAL M + + + L A
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 438 KIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAW 497
++G LH+ +++H ++L+ YAKCG I +R++F K D+ W
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVK--RNDVSIW 234
Query: 498 NSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVD 557
N+MI+ ++ HG + ++++M+ +V PD +TFLGLLT C + GL+++GKE F M
Sbjct: 235 NAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSR 294
Query: 558 LYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAE 617
+ QP EH+ MVDLLGRAG++ EA ++IE++P+ D ++ LLS+ + + +P L E
Sbjct: 295 RFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGE 354
Query: 618 VAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQV 677
+A Q N+ +G+YVLLSNIY++ KW+ K+R + G++K G SWLE G +
Sbjct: 355 IAIQ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMI 411
Query: 678 HEFRVADQSHPRSVDIYSILK 698
H F+ D SH + IY +L+
Sbjct: 412 HRFKAGDTSHIETKAIYKVLE 432
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 117/252 (46%), Gaps = 10/252 (3%)
Query: 257 GELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCM 316
G +N + S+ +K+G A+ + +++ WN+M+ Y N +E+L+ + M
Sbjct: 97 GVCNINLIIESL-MKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNM 155
Query: 317 VR-SGVRPDMFT---AIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSA 372
+ + ++P+ F+ ++ A + + L H +W +H+ +I +G + + +AL+D+Y+
Sbjct: 156 LSFTDIKPNKFSFASSLAACARLGDLHHAKW---VHSLMIDSGIELNAILSSALVDVYAK 212
Query: 373 CNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINI 432
C + ++R +F + V W+AMI A H EA+ +F EM+ D I + +
Sbjct: 213 CGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGL 272
Query: 433 LPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLAS-YAKCGCIEMARKLFDEGKSSH 491
L T + G L + G + + G ++ A +L E
Sbjct: 273 LTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELI-ESMPIE 331
Query: 492 KDIIAWNSMISA 503
D++ W S++S+
Sbjct: 332 PDVVIWRSLLSS 343
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 138/298 (46%), Gaps = 7/298 (2%)
Query: 154 GMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFS 213
G+ +L+ SL+++ E +G A + L S + WN MI + + EE +
Sbjct: 97 GVCNINLIIESLMKIGE-SGL--AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALK 153
Query: 214 RMRK-ENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKL 272
M +I+PN + + L + L L + +HSL+I S + +++AL+ +Y K
Sbjct: 154 NMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKC 213
Query: 273 GSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAI 332
G + +R +F + RND+ +WN M++ +A +G E++ + M V PD T + +
Sbjct: 214 GDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLL 273
Query: 333 SSITQLKHTEWGKQMHAHVIRNGS-DYQVSVHNALIDMYSACNGLNSARRIFD-LITDKT 390
++ + E GK+ + R S ++ + A++D+ + A + + + +
Sbjct: 274 TTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPD 333
Query: 391 VVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYL 448
VV W +++ + + E + I+ D++++ NI + K + VR L
Sbjct: 334 VVIWRSLLSSSRTYKNP-ELGEIAIQNLSKAKSGDYVLLSNIYSSTKKWESAQKVREL 390
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 122/240 (50%), Gaps = 5/240 (2%)
Query: 65 LMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVE-KSMYP 123
+++ K G GL++KV + + + ++ ++ + ++E+ L K M+ + P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 124 DEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPL 181
++ S + L +C + K VH+ ++ G++ ++ ++LV++Y K G + + E
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 182 EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLK 241
+ +++ WN MI+ G E ++FS M E++ P+SIT + LL + LL+
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 242 IGQALHSLIIVS-NLCGELTVNTALLSMYVKLGSLKDARLMFEKMP-RNDLVVWNIMVSA 299
G+ L+ ++ +L A++ + + G +K+A + E MP D+V+W ++S+
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 118/267 (44%), Gaps = 40/267 (14%)
Query: 28 FTTSSLLDLCTKP---QHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
F+ +S L C + H + +H+ G+ N+ LSS L+D Y K G G S++VFY
Sbjct: 166 FSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYS 225
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGK 144
+ D I++A++ + G + + ++ EM + + PD + +L +C
Sbjct: 226 VKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTC--------- 276
Query: 145 MVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTELAYWNNMISQAFESGK 204
H +++ G + F L+ + +P +L ++ M+ +G+
Sbjct: 277 -SHCGLLEEGKEYFGLMSRRF-----------SIQP-------KLEHYGAMVDLLGRAGR 317
Query: 205 MEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTA 264
++E ++L M I+P+ + +LL S+ ++G+ I + NL + +
Sbjct: 318 VKEAYELIESM---PIEPDVVIWRSLLSSSRTYKNPELGE-----IAIQNLSKAKSGDYV 369
Query: 265 LLS-MYVKLGSLKDARLMFEKMPRNDL 290
LLS +Y + A+ + E M + +
Sbjct: 370 LLSNIYSSTKKWESAQKVRELMSKEGI 396
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 133/398 (33%), Positives = 212/398 (53%), Gaps = 16/398 (4%)
Query: 294 NIMVSAYAGNGCP-KESLELVYCMVRSGVRPDMFTAIPAIS-SITQLKHTEWGKQMHAHV 351
N + Y +G P K L+ + +S D F+ + AI S Q + G+Q+HA V
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALV 91
Query: 352 IRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDK-TVVSWSAMIKAHAVHDQCLEA 410
+ G + + + +L+ YS+ ++ AR++FD +K +V W+AMI A+ ++ +EA
Sbjct: 92 RKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEA 151
Query: 411 LSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVR--YLHGYXXXXXXXXXXXXETSLL 468
+ LF M+ +D +IV L A +GA+ Y SLL
Sbjct: 152 IELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLL 211
Query: 469 ASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSN---- 524
Y K G E ARKLFDE S KD+ + SMI Y+ +G+ + EL+ +MK +
Sbjct: 212 NMYVKSGETEKARKLFDE--SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQD 269
Query: 525 --VKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQID 582
+ P+ VTF+G+L AC +SGLV++GK FK M+ Y +P + H CMVDL R+G +
Sbjct: 270 TVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLK 329
Query: 583 EASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYA 642
+A + I +P+ + ++ LL AC +H + L E +++ ++ + G+YV LSNIYA
Sbjct: 330 DAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYA 389
Query: 643 AAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEF 680
+ G WD+ +KMR +R R + PG SW+E ++EF
Sbjct: 390 SKGMWDEKSKMRDRVRKR---RMPGKSWIELGSIINEF 424
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 148/326 (45%), Gaps = 21/326 (6%)
Query: 97 LRNLSQFGEHEKTLFLYKEMVEKS-MYPDEESCSFVLR--SCFSVSHEQGKMVHAQIVKL 153
L+ + GE K L ++ +S + D S F ++ S S G+ +HA + KL
Sbjct: 35 LKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKL 94
Query: 154 GMDAFDLVRNSLVELYEKNGFLNAHEPL--EGMSVTELAYWNNMISQAFESGKMEECFQL 211
G +A ++ SLV Y G ++ + E + W MIS E+ E +L
Sbjct: 95 GFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIEL 154
Query: 212 FSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSN--LCGELTVNTALLSMY 269
F RM E I+ + + V L + DL +++G+ ++S I L +LT+ +LL+MY
Sbjct: 155 FKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMY 214
Query: 270 VKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVR------SGVRP 323
VK G + AR +F++ R D+ + M+ YA NG +ESLEL M + + P
Sbjct: 215 VKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITP 274
Query: 324 DMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNA----LIDMYSACNGLNSA 379
+ T I + + + E GK+ +I DY + A ++D++ L A
Sbjct: 275 NDVTFIGVLMACSHSGLVEEGKRHFKSMI---MDYNLKPREAHFGCMVDLFCRSGHLKDA 331
Query: 380 RRIFDLITDK-TVVSWSAMIKAHAVH 404
+ + K V W ++ A ++H
Sbjct: 332 HEFINQMPIKPNTVIWRTLLGACSLH 357
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 220 bits (561), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 216/415 (52%), Gaps = 36/415 (8%)
Query: 290 LVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRP-DMFTAIPAISSITQLKHTEWGKQMH 348
L+ +S+YA G +++L L M S P D A+ S G +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 349 AHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCL 408
AH +++ V AL+DMY C ++ AR++FD I + V W+AMI + +
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 409 EALSLFIEMK--------------LCGT-------------------RVDFIIVINILPT 435
EA+ L+ M L GT + + I ++ ++
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 436 FAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDII 495
+ IGA ++ +H Y ++ L+ +Y +CG I + +FD + +D++
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMED--RDVV 249
Query: 496 AWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEM 555
AW+S+ISAY+ HG+ + + +M+L+ V PD + FL +L AC ++GL D+ FK M
Sbjct: 250 AWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRM 309
Query: 556 VDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRL 615
YG + S++H++C+VD+L R G+ +EA K+I+ +P A+ +G LL AC+ + + L
Sbjct: 310 QGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIEL 369
Query: 616 AEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSW 670
AE+AA++L+ +EP+N NYVLL IY + G+ ++ ++R +++ G+K +PG SW
Sbjct: 370 AEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 183/441 (41%), Gaps = 79/441 (17%)
Query: 185 SVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINL-LRSTVDLHLLKIG 243
S T+L +S G E+ LF +M P V +L L+S +G
Sbjct: 8 SCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLG 67
Query: 244 QALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGN 303
++H+ + SN V ALL MY K S+ AR +F+++P+ + VVWN M+S Y
Sbjct: 68 GSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHC 127
Query: 304 GCPKESLELVYC---------------------------------MVRSGVRPDMFTAIP 330
G KE++EL M+ +P++ T +
Sbjct: 128 GKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLA 187
Query: 331 AISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKT 390
+S+ + + K++H++ RN + + + L++ Y C + + +FD + D+
Sbjct: 188 LVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRD 247
Query: 391 VVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIG----ALHYVR 446
VV+WS++I A+A+H AL F EM+L D I +N+L + G AL Y +
Sbjct: 248 VVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFK 307
Query: 447 YLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSK 506
+ G D G + KD ++ ++ S+
Sbjct: 308 RMQG----------------------------------DYGLRASKD--HYSCLVDVLSR 331
Query: 507 HGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQE 566
G + + +++ M KP T+ LL AC N G ++ + +E++ + P+
Sbjct: 332 VGRFEEAYKVIQAMP---EKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPA-- 386
Query: 567 HHACMVDLLGRAGQIDEASKI 587
++ + + G+ +EA ++
Sbjct: 387 NYVLLGKIYMSVGRQEEAERL 407
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 146/350 (41%), Gaps = 47/350 (13%)
Query: 95 AILRNLSQF---GEHEKTLFLYKEMVEKSMYP-DEESCSFVLRSCFSVSHEQ-GKMVHAQ 149
++ + LS + G HE+ L L+ +M P D S L+SC + G VHA
Sbjct: 14 SLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAH 73
Query: 150 IVKLGMDAFDLVRNSLVELYEKN-GFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEEC 208
VK + V +L+++Y K +A + + + WN MIS GK++E
Sbjct: 74 SVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEA 133
Query: 209 FQLFS---------------------------------RMRKENIQPNSITVINLLRSTV 235
+L+ +M + +PN IT++ L+ +
Sbjct: 134 VELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACS 193
Query: 236 DLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNI 295
+ ++ + +HS + + + + L+ Y + GS+ +L+F+ M D+V W+
Sbjct: 194 AIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSS 253
Query: 296 MVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNG 355
++SAYA +G + +L+ M + V PD I ++ + H + + R
Sbjct: 254 LISAYALHGDAESALKTFQEMELAKVTPD---DIAFLNVLKACSHAGLADEALVYFKRMQ 310
Query: 356 SDYQVSV----HNALIDMYSACNGLNSARRIFDLITDK-TVVSWSAMIKA 400
DY + ++ L+D+ S A ++ + +K T +W A++ A
Sbjct: 311 GDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGA 360
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 219 bits (558), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 242/473 (51%), Gaps = 20/473 (4%)
Query: 244 QALHSLIIVSNLCGELTVNTALLSMYVKLGSLKD----ARLMFEKMPRNDLVVWNIMVSA 299
++ HSL I+ L + LL+ ++ L +L A +F+ + + V++ M+
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRI 87
Query: 300 YAGNGCPKESLELVYCMVRS---GVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNG- 355
+ + P L MV+ + P T I + + GKQ+H V++NG
Sbjct: 88 CSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGV 147
Query: 356 --SDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSL 413
SD V ++ +Y L AR++FD I VV W ++ + E L +
Sbjct: 148 FLSDGHV--QTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEV 205
Query: 414 FIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXX-XXXXXXXETSLLASYA 472
F EM + G D V L A++GAL +++H + T+L+ YA
Sbjct: 206 FKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYA 265
Query: 473 KCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSN-VKPDQVT 531
KCGCIE A ++F+ K + +++ +W ++I Y+ +G + ++++ + +KPD V
Sbjct: 266 KCGCIETAVEVFE--KLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVV 323
Query: 532 FLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETV 591
LG+L AC + G +++G+ + + M YG P EH++C+VDL+ RAG++D+A +IE +
Sbjct: 324 LLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKM 383
Query: 592 PLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNA----GNYVLLSNIYAAAGKW 647
P+ A V+G LL+ C+ H + L E+A Q L+++E N V LSNIY + +
Sbjct: 384 PMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRN 443
Query: 648 DKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILKVM 700
+ K+R + RG++KTPG S LE +G V +F D SHP + I++++ ++
Sbjct: 444 PEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLL 496
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 181/391 (46%), Gaps = 32/391 (8%)
Query: 37 CTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQ------KVFYFTENPDS 90
C + ++ H+ F +HGLH+N+ SKL+ + LP L++ +F E P+S
Sbjct: 21 CNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAF--LHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 91 VIYSAILRNLSQFGEHEKTLFLYKEMV---EKSMYPDEESCSFVLRSC-----FSVSHEQ 142
+Y ++R S+ + L + MV E+ + P + F++ +C FSV
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSV---- 134
Query: 143 GKMVHAQIVKLGMDAFD-LVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAF 200
GK +H +VK G+ D V+ ++ +Y ++ L +A + + + ++ W+ +++
Sbjct: 135 GKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYV 194
Query: 201 ESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSN-LCGEL 259
G E ++F M I+P+ +V L + + L G+ +H + + ++
Sbjct: 195 RCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDV 254
Query: 260 TVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVR- 318
V TAL+ MY K G ++ A +FEK+ R ++ W ++ YA G K++ C+ R
Sbjct: 255 FVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKA---TTCLDRI 311
Query: 319 ---SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHV-IRNGSDYQVSVHNALIDMYSACN 374
G++PD + +++ E G+ M ++ R G + ++ ++D+
Sbjct: 312 EREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAG 371
Query: 375 GLNSARRIFDLITDKTVVS-WSAMIKAHAVH 404
L+ A + + + K + S W A++ H
Sbjct: 372 RLDDALDLIEKMPMKPLASVWGALLNGCRTH 402
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 149/599 (24%), Positives = 285/599 (47%), Gaps = 37/599 (6%)
Query: 61 LSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKS 120
L ++ ++ Y K G ++++F D ++A++ +Q G ++ +++ M
Sbjct: 98 LLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDG 157
Query: 121 MYPDEESCSFVLRSC-FSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAH 178
+ E S + VL+SC + + +H +VK G + S+V++Y K + +A
Sbjct: 158 VRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDAR 217
Query: 179 EPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLH 238
+ + WN ++ + E G +E +F +M + N++P + TV +++ +
Sbjct: 218 RVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSL 277
Query: 239 LLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVS 298
L++G+ +H++ + ++ + V+T++ MYVK L+ AR +F++ DL W +S
Sbjct: 278 ALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMS 337
Query: 299 AYAGNGCPKESLELVYCMVRSGV-------------------------------RPDMFT 327
YA +G +E+ EL M + D T
Sbjct: 338 GYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVT 397
Query: 328 AIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLIT 387
+ ++ + + + GKQ H + R+G D V V NAL+DMY C L SA F ++
Sbjct: 398 LVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMS 457
Query: 388 D-KTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVR 446
+ + VSW+A++ A + +ALS F M++ + + +L A I AL+ +
Sbjct: 458 ELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSKYTLA-TLLAGCANIPALNLGK 516
Query: 447 YLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSK 506
+HG+ +++ Y+KC C + A ++F E + +D+I WNS+I +
Sbjct: 517 AIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAAT--RDLILWNSIIRGCCR 574
Query: 507 HGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQE 566
+G + FEL+ ++ VKPD VTFLG+L AC+ G V+ G + F M Y P E
Sbjct: 575 NGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVE 634
Query: 567 HHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLIN 625
H+ CM++L + G + + + + +P + ++ + AC+ + +L AA++L+N
Sbjct: 635 HYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLMN 693
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/513 (23%), Positives = 225/513 (43%), Gaps = 43/513 (8%)
Query: 131 VLRSCFSVSHE-QGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTE 188
+ RSC S + Q + V + +V + N +E Y K G ++ A E E M +
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERD 126
Query: 189 LAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRS---TVDLHLLKIGQA 245
WN +I+ ++G +E F++F RM ++ ++ + +L+S +DL LL+
Sbjct: 127 GGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLR---Q 183
Query: 246 LHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGC 305
LH ++ G + + T+++ +Y K + DAR +F+++ V WN++V Y G
Sbjct: 184 LHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGF 243
Query: 306 PKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNA 365
E++ + + M+ VRP T + + ++ E GK +HA ++ V +
Sbjct: 244 NDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTS 303
Query: 366 LIDMYSACNGLNSARRI-------------------------------FDLITDKTVVSW 394
+ DMY C+ L SARR+ FDL+ ++ +VSW
Sbjct: 304 VFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSW 363
Query: 395 SAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXX 454
+AM+ + + EAL M+ +D + ++ IL + I + + HG+
Sbjct: 364 NAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYR 423
Query: 455 XXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCF 514
+LL Y KCG ++ A F + S +D ++WN++++ ++ G Q
Sbjct: 424 HGYDTNVIVANALLDMYGKCGTLQSANIWFRQ-MSELRDEVSWNALLTGVARVGRSEQAL 482
Query: 515 ELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDL 574
+ M++ KP + T LL C N ++ GK I ++ GY+ MVD+
Sbjct: 483 SFFEGMQV-EAKPSKYTLATLLAGCANIPALNLGKAIHGFLIR-DGYKIDVVIRGAMVDM 540
Query: 575 LGRAGQIDEASKIIETVPLNSDARVYGPLLSAC 607
+ D A ++ + D ++ ++ C
Sbjct: 541 YSKCRCFDYAIEVFKEAA-TRDLILWNSIIRGC 572
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/468 (22%), Positives = 210/468 (44%), Gaps = 39/468 (8%)
Query: 7 LFHLLNIRKIPYIVAPFQTRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLM 66
+F +N + F + +LDL + L+Q+H +G N L + ++
Sbjct: 149 MFRRMNRDGVRATETSFAGVLKSCGLILDL----RLLRQLHCAVVKYGYSGNVDLETSIV 204
Query: 67 DCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEE 126
D Y K + +++VF NP V ++ I+R + G +++ + ++ +M+E ++ P
Sbjct: 205 DVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNH 264
Query: 127 SCSFVLRSCF-SVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEK-------------- 171
+ S V+ +C S++ E GK++HA VKL + A +V S+ ++Y K
Sbjct: 265 TVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQT 324
Query: 172 ------------NGFL------NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFS 213
+G+ A E + M + WN M+ + + +E +
Sbjct: 325 RSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLT 384
Query: 214 RMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLG 273
MR+E +++T++ +L + +++G+ H I + V ALL MY K G
Sbjct: 385 LMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCG 444
Query: 274 SLKDARLMFEKMPR-NDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAI 332
+L+ A + F +M D V WN +++ A G +++L M + +P +T +
Sbjct: 445 TLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLL 503
Query: 333 SSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVV 392
+ + GK +H +IR+G V + A++DMYS C + A +F + ++
Sbjct: 504 AGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLI 563
Query: 393 SWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIG 440
W+++I+ + + E LF+ ++ G + D + + IL + G
Sbjct: 564 LWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREG 611
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 158/346 (45%), Gaps = 6/346 (1%)
Query: 29 TTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENP 88
++S+ D+ K L+ R F ++ + M Y GL ++++F
Sbjct: 300 VSTSVFDMYVKCDRLESAR-RVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPER 358
Query: 89 DSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-GKMVH 147
+ V ++A+L E ++ L M ++ D + ++L C +S Q GK H
Sbjct: 359 NIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAH 418
Query: 148 AQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMS-VTELAYWNNMISQAFESGKM 205
I + G D +V N+L+++Y K G L +A+ MS + + WN +++ G+
Sbjct: 419 GFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRS 478
Query: 206 EECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTAL 265
E+ F M+ E +P+ T+ LL ++ L +G+A+H +I ++ + A+
Sbjct: 479 EQALSFFEGMQVE-AKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAM 537
Query: 266 LSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDM 325
+ MY K A +F++ DL++WN ++ NG KE EL + GV+PD
Sbjct: 538 VDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDH 597
Query: 326 FTAIPAISSITQLKHTEWGKQMHAHV-IRNGSDYQVSVHNALIDMY 370
T + + + + H E G Q + + + QV ++ +I++Y
Sbjct: 598 VTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELY 643
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 136/316 (43%), Gaps = 9/316 (2%)
Query: 344 GKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAV 403
+++ +H++ + + N I+ Y C ++ AR +F+ + ++ SW+A+I A A
Sbjct: 80 ARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQ 139
Query: 404 HDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXX 463
+ E +F M G R +L + I L +R LH
Sbjct: 140 NGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDL 199
Query: 464 ETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLS 523
ETS++ Y KC + AR++FDE + ++WN ++ Y + G + ++ +M
Sbjct: 200 ETSIVDVYGKCRVMSDARRVFDEIVNPSD--VSWNVIVRRYLEMGFNDEAVVMFFKMLEL 257
Query: 524 NVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDE 583
NV+P T ++ AC S ++ GK I V L + D+ + +++
Sbjct: 258 NVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKL-SVVADTVVSTSVFDMYVKCDRLES 316
Query: 584 ASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEP-KNAGNYVLLSNIYA 642
A ++ + + D + + +S M R A++L ++ P +N ++ + Y
Sbjct: 317 ARRVFDQTR-SKDLKSWTSAMSGYAMSGLTR----EARELFDLMPERNIVSWNAMLGGYV 371
Query: 643 AAGKWDKVAKMRSFLR 658
A +WD+ + +R
Sbjct: 372 HAHEWDEALDFLTLMR 387
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 216 bits (549), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 138/473 (29%), Positives = 238/473 (50%), Gaps = 20/473 (4%)
Query: 244 QALHSLIIVSNLCGELTVNTALLSMYVKLGSLKD----ARLMFEKMPRNDLVVWNIMVSA 299
++ HSL I+ L + LL+ ++ L +L A +F+ + + V++ M+
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRI 87
Query: 300 YAGNGCPKESLELVYCMVRS---GVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGS 356
+ + P L MV+ + P T I + + GKQ+H V++NG
Sbjct: 88 CSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGV 147
Query: 357 DYQVS-VHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFI 415
S V ++ +Y L AR++FD I VV W ++ + E L +F
Sbjct: 148 FLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFR 207
Query: 416 EMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXX-XXXXXXXETSLLASYAKC 474
EM + G D V L A++GAL +++H + T+L+ YAKC
Sbjct: 208 EMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKC 267
Query: 475 GCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHG---EWFQCFELYNQMKLSNVKPDQVT 531
GCIE A ++F K + +++ +W ++I Y+ +G + C E + +KPD V
Sbjct: 268 GCIETAVEVFK--KLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLE--REDGIKPDSVV 323
Query: 532 FLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETV 591
LG+L AC + G +++G+ + + M Y P EH++C+VDL+ RAG++D+A +IE +
Sbjct: 324 LLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKM 383
Query: 592 PLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNA----GNYVLLSNIYAAAGKW 647
P+ A V+G LL+ C+ H + L E+A + L+++E N V LSNIY + +
Sbjct: 384 PMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRN 443
Query: 648 DKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILKVM 700
+ +K+R + RG++KTPG S LE +G V +F D SHP + I++++ ++
Sbjct: 444 PEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHLL 496
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 185/391 (47%), Gaps = 32/391 (8%)
Query: 37 CTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQ------KVFYFTENPDS 90
C + ++ H+ F +HGLH+N+ SKL+ + LP L++ +F E P+S
Sbjct: 21 CNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAF--LHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 91 VIYSAILRNLSQFGEHEKTLFLYKEMV---EKSMYPDEESCSFVLRSC-----FSVSHEQ 142
+Y ++R S+ + L + MV E+ + P + F++ +C FSV
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSV---- 134
Query: 143 GKMVHAQIVKLGMDAFDL-VRNSLVELY-EKNGFLNAHEPLEGMSVTELAYWNNMISQAF 200
GK +H +VK G+ D V+ ++ +Y E L+A + + + ++ W+ +++
Sbjct: 135 GKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYV 194
Query: 201 ESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLI-IVSNLCGEL 259
G E ++F M + ++P+ +V L + + L G+ +H + S + ++
Sbjct: 195 RCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDV 254
Query: 260 TVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVR- 318
V TAL+ MY K G ++ A +F+K+ R ++ W ++ YA G K+++ + + R
Sbjct: 255 FVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLERE 314
Query: 319 SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSV----HNALIDMYSACN 374
G++PD + +++ E G+ M ++ + Y+++ ++ ++D+
Sbjct: 315 DGIKPDSVVLLGVLAACAHGGFLEEGRSMLENM---EARYEITPKHEHYSCIVDLMCRAG 371
Query: 375 GLNSARRIFDLITDKTVVS-WSAMIKAHAVH 404
L+ A + + + K + S W A++ H
Sbjct: 372 RLDDALNLIEKMPMKPLASVWGALLNGCRTH 402
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 142/313 (45%), Gaps = 28/313 (8%)
Query: 8 FHLLNIRKIPYIVAPFQTRFFTTSSLLDLCTKPQHL---QQIHARFFLHGLH-QNSSLSS 63
+ LL +++ +AP + T L+ C K +QIH +G+ +S + +
Sbjct: 100 YFLLMVKEEEEDIAP---SYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQT 156
Query: 64 KLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYP 123
++ Y + L ++KVF PD V + ++ + G + L +++EM+ K + P
Sbjct: 157 GVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEP 216
Query: 124 DEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDL-VRNSLVELYEKNGFL-NAHEP 180
DE S + L +C V QGK +H + K D+ V +LV++Y K G + A E
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 181 LEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKEN-IQPNSITVINLLRSTVDLHL 239
+ ++ + W +I G ++ R+ +E+ I+P+S+ ++ +L +
Sbjct: 277 FKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGF 336
Query: 240 LKIGQALHSLIIVSNLCGELTVN------TALLSMYVKLGSLKDARLMFEKMPRNDLV-V 292
L+ G+++ + N+ + + ++ + + G L DA + EKMP L V
Sbjct: 337 LEEGRSM-----LENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASV 391
Query: 293 WNIMVSAYAGNGC 305
W ++ NGC
Sbjct: 392 WGALL-----NGC 399
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 245/463 (52%), Gaps = 38/463 (8%)
Query: 275 LKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISS 334
+++A +F+++P D++ ++ + E+ + ++ G+RP+ FT I S
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 335 ITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSW 394
T + + GKQ+H + ++ G V V +A+++ Y + L ARR FD D VVS
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 395 SAMIKAHAVHDQCLEALSLFIEM----------------------KLCGTRVDFI---IV 429
+ +I + + EALSLF M + T VD + +V
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 430 INILPTF-------AKIGALHYVRYLHGYXXXXXXXXXXX-XETSLLASYAKCGCIEMAR 481
I TF + I + + +H SL++ Y+KCG +E +
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 282
Query: 482 KLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQM-KLSNVKPDQVTFLGLLTACV 540
F++ + ++I++WNSMI Y+ +G + ++ +M K +N++P+ VT LG+L AC
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 342
Query: 541 NSGLVDKGKEIFKEMVDLYGYQPSQ---EHHACMVDLLGRAGQIDEASKIIETVPLNSDA 597
++GL+ +G F + V+ Y P+ EH+ACMVD+L R+G+ EA ++I+++PL+
Sbjct: 343 HAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGI 401
Query: 598 RVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFL 657
+ LL C++HS+ RLA++AA K++ ++P++ +YV+LSN Y+A W V+ +R +
Sbjct: 402 GFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKM 461
Query: 658 RDRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILKVM 700
++ GLK+ GCSW+E Q+ F AD+++ ++Y +L ++
Sbjct: 462 KETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALV 504
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 142/305 (46%), Gaps = 36/305 (11%)
Query: 165 LVELYEKNGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNS 224
LV+ + + NAH+ + + ++ +I + + + E Q F R+ I+PN
Sbjct: 34 LVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNE 93
Query: 225 ITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARL---- 280
T ++ S+ +K+G+ LH + L + V +A+L+ YVKL +L DAR
Sbjct: 94 FTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDD 153
Query: 281 ---------------------------MFEKMPRNDLVVWNIMVSAYAGNGCPKESLELV 313
+F MP +V WN ++ ++ G +E++
Sbjct: 154 TRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTF 213
Query: 314 YCMVRSGVR-PDMFTAIPAISSITQLKHTEWGKQMHAHVIRN-GSDYQVSVHNALIDMYS 371
M+R GV P+ T AI++I+ + GK +HA I+ G + V V N+LI YS
Sbjct: 214 VDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYS 273
Query: 372 ACNGLNSARRIFDLITD--KTVVSWSAMIKAHAVHDQCLEALSLFIEM-KLCGTRVDFII 428
C + + F+ + + + +VSW++MI +A + + EA+++F +M K R + +
Sbjct: 274 KCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVT 333
Query: 429 VINIL 433
++ +L
Sbjct: 334 ILGVL 338
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 157/371 (42%), Gaps = 46/371 (12%)
Query: 78 SQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVL-RSCF 136
+ KVF D + +A++ + H + +K ++ + P+E + V+ S
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 137 SVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEK------------------------- 171
S + GK +H +K+G+ + V ++++ Y K
Sbjct: 106 SRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNL 165
Query: 172 -NGFLNAHEPLEGMSV------TELAYWNNMISQAFESGKMEECFQLFSRMRKENIQ-PN 223
+G+L HE E +S+ + WN +I ++G+ EE F M +E + PN
Sbjct: 166 ISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPN 225
Query: 224 SITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGE---LTVNTALLSMYVKLGSLKDARL 280
T + + ++ G+++H+ I G+ + V +L+S Y K G+++D+ L
Sbjct: 226 ESTFPCAITAISNIASHGAGKSIHACAI--KFLGKRFNVFVWNSLISFYSKCGNMEDSLL 283
Query: 281 MFEKM--PRNDLVVWNIMVSAYAGNGCPKESLELVYCMVR-SGVRPDMFTAIPAISSITQ 337
F K+ + ++V WN M+ YA NG +E++ + MV+ + +RP+ T + + +
Sbjct: 284 AFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNH 343
Query: 338 LKHTEWGKQMHAHVIRNGSD---YQVSVHNALIDMYSACNGLNSARRIF-DLITDKTVVS 393
+ G + + D ++ + ++DM S A + + D +
Sbjct: 344 AGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGF 403
Query: 394 WSAMIKAHAVH 404
W A++ +H
Sbjct: 404 WKALLGGCQIH 414
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 146/477 (30%), Positives = 244/477 (51%), Gaps = 20/477 (4%)
Query: 201 ESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELT 260
SG + LF ++ + + +S T +L + L + G+ +H+L+I
Sbjct: 61 RSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTI 120
Query: 261 VNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG 320
TAL+ MY K G L D+ +FE + DLV WN ++S + NG KE+L + M R
Sbjct: 121 SKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRER 180
Query: 321 VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSAR 380
V FT + + LK + GKQ+HA V+ G D V + A+I YS+ +N A
Sbjct: 181 VEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAM 239
Query: 381 RIFDLI---TDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFA 437
++++ + TD+ +++ ++I + EA L + R + ++ + L +
Sbjct: 240 KVYNSLNVHTDEVMLN--SLISGCIRNRNYKEAFLL-----MSRQRPNVRVLSSSLAGCS 292
Query: 438 KIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAW 497
L + +H L+ Y KCG I AR +F S K +++W
Sbjct: 293 DNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPS--KSVVSW 350
Query: 498 NSMISAYSKHGEWFQCFELYNQM--KLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEM 555
SMI AY+ +G+ + E++ +M + S V P+ VTFL +++AC ++GLV +GKE F M
Sbjct: 351 TSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMM 410
Query: 556 VDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSD----ARVYGPLLSACKMHS 611
+ Y P EH+ C +D+L +AG+ +E +++E + N + ++ +LSAC ++
Sbjct: 411 KEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNM 470
Query: 612 DPRLAEVAAQKLI-NMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPG 667
D E A++L+ P+NA YVL+SN YAA GKWD V ++R L+++GL KT G
Sbjct: 471 DLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAG 527
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 182/339 (53%), Gaps = 20/339 (5%)
Query: 104 GEHEKTLFLYKEMVEKSMYPDEESCSF--VLRSCFSVSH-EQGKMVHAQIVKLGMDAFDL 160
G TL L+ ++ S PD S +F VL +C +S+ E G+ VHA ++K G + +
Sbjct: 63 GNPNDTLALFLQIHRAS--PDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTI 120
Query: 161 VRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKEN 219
+ +L+++Y K G L ++ E + +L WN ++S +GK +E +F+ M +E
Sbjct: 121 SKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRER 180
Query: 220 IQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTV-NTALLSMYVKLGSLKDA 278
++ + T+ +++++ L +L+ G+ +H++++V+ +L V TA++S Y +G + +A
Sbjct: 181 VEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR--DLVVLGTAMISFYSSVGLINEA 238
Query: 279 RLMFEKMP-RNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQ 337
++ + D V+ N ++S N KE+ L+ S RP++ +++ +
Sbjct: 239 MKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLM-----SRQRPNVRVLSSSLAGCSD 293
Query: 338 LKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAM 397
GKQ+H +RNG + N L+DMY C + AR IF I K+VVSW++M
Sbjct: 294 NSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSM 353
Query: 398 IKAHAVHDQCLEALSLFIEMKLCGT-----RVDFIIVIN 431
I A+AV+ ++AL +F EM G+ V F++VI+
Sbjct: 354 IDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVIS 392
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 153/316 (48%), Gaps = 11/316 (3%)
Query: 36 LCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSA 95
L + P+ +Q+HA G + + L+D Y+K+G S +VF E D V ++A
Sbjct: 96 LLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNA 155
Query: 96 ILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVS-HEQGKMVHAQIVKLG 154
+L + G+ ++ L ++ M + + E + S V+++C S+ +QGK VHA +V G
Sbjct: 156 LLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG 215
Query: 155 MDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSV-TELAYWNNMISQAFESGKMEECFQLF 212
D ++ +++ Y G +N A + ++V T+ N++IS + +E F L
Sbjct: 216 RDLV-VLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLM 274
Query: 213 SRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKL 272
SR R PN + + L D L IG+ +H + + + + + L+ MY K
Sbjct: 275 SRQR-----PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKC 329
Query: 273 GSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELV--YCMVRSGVRPDMFTAIP 330
G + AR +F +P +V W M+ AYA NG ++LE+ C SGV P+ T +
Sbjct: 330 GQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLV 389
Query: 331 AISSITQLKHTEWGKQ 346
IS+ + GK+
Sbjct: 390 VISACAHAGLVKEGKE 405
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 154/318 (48%), Gaps = 14/318 (4%)
Query: 281 MFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDM--FTAIPAISSITQL 338
+F+++P+ DL N +S++ +G P ++L L + R+ PD+ T P + + + L
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRAS--PDLSSHTFTPVLGACSLL 97
Query: 339 KHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMI 398
+ E G+Q+HA +I+ G++ ALIDMYS L + R+F+ + +K +VSW+A++
Sbjct: 98 SYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALL 157
Query: 399 KAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXX 458
+ + EAL +F M + + +++ T A + L + +H
Sbjct: 158 SGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRD 217
Query: 459 XXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYN 518
T++++ Y+ G I A K+++ + H D + NS+IS ++ + + F L
Sbjct: 218 LVVLG-TAMISFYSSVGLINEAMKVYNS-LNVHTDEVMLNSLISGCIRNRNYKEAFLL-- 273
Query: 519 QMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLY-GYQPSQEHHACMVDLLGR 577
+S +P+ L C ++ + GK+I V L G+ + ++D+ G+
Sbjct: 274 ---MSRQRPNVRVLSSSLAGCSDNSDLWIGKQI--HCVALRNGFVSDSKLCNGLMDMYGK 328
Query: 578 AGQIDEASKIIETVPLNS 595
GQI +A I +P S
Sbjct: 329 CGQIVQARTIFRAIPSKS 346
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 134/475 (28%), Positives = 235/475 (49%), Gaps = 44/475 (9%)
Query: 193 NNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIV 252
N++I S E +F M + P+ + +L++ + G+ +H L I
Sbjct: 109 NSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIK 168
Query: 253 SNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLEL 312
S L ++ V L+++Y + G + AR + ++MP D V WN ++SAY G E+ L
Sbjct: 169 SGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARAL 228
Query: 313 VYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSA 372
M V W N +I Y+A
Sbjct: 229 FDEMEERNVES-------------------W--------------------NFMISGYAA 249
Query: 373 CNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCL-EALSLFIEMKLCGT-RVDFIIVI 430
+ A+ +FD + + VVSW+AM+ A+A H C E L +F +M T + D ++
Sbjct: 250 AGLVKEAKEVFDSMPVRDVVSWNAMVTAYA-HVGCYNEVLEVFNKMLDDSTEKPDGFTLV 308
Query: 431 NILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSS 490
++L A +G+L ++H Y T+L+ Y+KCG I+ A ++F +S
Sbjct: 309 SVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFR--ATS 366
Query: 491 HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKE 550
+D+ WNS+IS S HG E++++M KP+ +TF+G+L+AC + G++D+ ++
Sbjct: 367 KRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARK 426
Query: 551 IFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMH 610
+F+ M +Y +P+ EH+ CMVDLLGR G+I+EA +++ +P + + + LL ACK
Sbjct: 427 LFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRF 486
Query: 611 SDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKT 665
AE A +L+ + +++ Y +SN+YA+ G+W+KV R +R + ++
Sbjct: 487 GQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNRS 541
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 225/492 (45%), Gaps = 47/492 (9%)
Query: 42 HLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLP---GLSQKVFYFTENPDSVIYSAILR 98
+QQ HA GL ++ +SKL+ P + + +P+ +++++R
Sbjct: 54 EIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIR 113
Query: 99 NLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSV-SHEQGKMVHAQIVKLGMDA 157
+ E L +++EM+ ++PD+ S +FVL++C + E+G+ +H +K G+
Sbjct: 114 AYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVT 173
Query: 158 FDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMR 216
V N+LV +Y ++G+ A + L+ M V + WN+++S E G ++E LF M
Sbjct: 174 DVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME 233
Query: 217 KENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLK 276
+ N++ + ++S Y G +K
Sbjct: 234 ERNVESWNF---------------------------------------MISGYAAAGLVK 254
Query: 277 DARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVR-SGVRPDMFTAIPAISSI 335
+A+ +F+ MP D+V WN MV+AYA GC E LE+ M+ S +PD FT + +S+
Sbjct: 255 EAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSAC 314
Query: 336 TQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWS 395
L G+ +H ++ ++G + + + AL+DMYS C ++ A +F + + V +W+
Sbjct: 315 ASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWN 374
Query: 396 AMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXX 455
++I +VH +AL +F EM G + + I I +L +G L R L
Sbjct: 375 SIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSV 434
Query: 456 XXXXXXXXETSLLAS-YAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCF 514
+ + G IE A +L +E + I+ S++ A + G+ Q
Sbjct: 435 YRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASIL-LESLLGACKRFGQLEQAE 493
Query: 515 ELYNQMKLSNVK 526
+ N++ N++
Sbjct: 494 RIANRLLELNLR 505
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/482 (26%), Positives = 240/482 (49%), Gaps = 12/482 (2%)
Query: 192 WNNMISQAFESGKMEECFQLFSRMRKENI-QPNSITVINLLRSTVDLHLLKIGQALHSLI 250
WN++I E + RM + + +P+ T +++ + +++G ++H L+
Sbjct: 77 WNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLV 136
Query: 251 IVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESL 310
+ ++ V T+ + Y K L AR +F +MP + V W +V AY +G +E+
Sbjct: 137 LRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAK 196
Query: 311 ELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMY 370
+ M ++ + + + + K++ + + + + ++ID Y
Sbjct: 197 SMFDLMPER----NLGSWNALVDGLVKSGDLVNAKKLFDEMPKR----DIISYTSMIDGY 248
Query: 371 SACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVI 430
+ + SAR +F+ V +WSA+I +A + Q EA +F EM + D I++
Sbjct: 249 AKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMV 308
Query: 431 NILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXET-SLLASYAKCGCIEMARKLFDEGKS 489
++ +++G + Y +L+ AKCG ++ A KLF+E
Sbjct: 309 GLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEE--M 366
Query: 490 SHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGK 549
+D++++ SM+ + HG + L+ +M + PD+V F +L C S LV++G
Sbjct: 367 PQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGL 426
Query: 550 EIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKM 609
F+ M Y S +H++C+V+LL R G++ EA ++I+++P + A +G LL C +
Sbjct: 427 RYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSL 486
Query: 610 HSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCS 669
H + +AEV A+ L +EP++AG+YVLLSNIYAA +W VA +R + + G+ K G S
Sbjct: 487 HGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRS 546
Query: 670 WL 671
W+
Sbjct: 547 WI 548
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 192/417 (46%), Gaps = 22/417 (5%)
Query: 27 FFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQK-VFYFT 85
+ +L LC HL QIHAR GL Q+ +L S + + VF
Sbjct: 10 LLSLETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERV 69
Query: 86 ENPDSVIYSAILRNLS-QFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-G 143
+P + +++ +++ S +F E L + M PDE + V++ C + + G
Sbjct: 70 PSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVG 129
Query: 144 KMVHAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAFES 202
VH ++++G D +V S V+ Y K +A + M W ++ +S
Sbjct: 130 SSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKS 189
Query: 203 GKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN 262
G++EE +F M + N+ + V L++S ++ K+ + I+S
Sbjct: 190 GELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISY-------- 241
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
T+++ Y K G + AR +FE+ D+ W+ ++ YA NG P E+ ++ M V+
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 301
Query: 323 PDMFTAIPAISSITQLKHTEWGKQ----MHAHVIRNGSDYQVSVHNALIDMYSACNGLNS 378
PD F + +S+ +Q+ E ++ +H + + S Y V ALIDM + C ++
Sbjct: 302 PDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVP---ALIDMNAKCGHMDR 358
Query: 379 ARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEM---KLCGTRVDFIIVINI 432
A ++F+ + + +VS+ +M++ A+H EA+ LF +M + V F +++ +
Sbjct: 359 AAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKV 415
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 114/275 (41%), Gaps = 18/275 (6%)
Query: 346 QMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARR-IFDLITDKTVVSWSAMIKAHAVH 404
Q+HA +IR G + ++ + I S+ + S +F+ + W+ +IK ++
Sbjct: 28 QIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGYSNK 87
Query: 405 DQCLEALSLFIEMKLCG-TRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXX 463
E +S+ + M G R D ++ + G + +HG
Sbjct: 88 FLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVV 147
Query: 464 ETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLS 523
TS + Y KC + ARK+F G+ ++ ++W +++ AY K GE + +++ M
Sbjct: 148 GTSFVDFYGKCKDLFSARKVF--GEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPER 205
Query: 524 NVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQE--HHACMVDLLGRAGQI 581
N+ ++ L+ V SG + K++F EM P ++ + M+D + G +
Sbjct: 206 NLG----SWNALVDGLVKSGDLVNAKKLFDEM-------PKRDIISYTSMIDGYAKGGDM 254
Query: 582 DEASKIIETVPLNSDARVYGPLLSACKMHSDPRLA 616
A + E D R + L+ + P A
Sbjct: 255 VSARDLFEEAR-GVDVRAWSALILGYAQNGQPNEA 288
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/557 (25%), Positives = 261/557 (46%), Gaps = 86/557 (15%)
Query: 163 NSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQ 221
N+++ Y KN + L E M W+ MI+ ++G+++ LF +M ++
Sbjct: 140 NTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSS 199
Query: 222 PNSITVINLLRST-VDLHLLKIGQ-------------ALHSLII---------------- 251
P V L+++ + +GQ A ++LI+
Sbjct: 200 PLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFD 259
Query: 252 -VSNLCGE-------------LTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMV 297
+ +LCG+ + +++ Y+K+G + ARL+F++M D + WN M+
Sbjct: 260 QIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMI 319
Query: 298 SAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSD 357
Y +++ L F+ +P + H+
Sbjct: 320 DGYVHVSRMEDAFAL-------------FSEMP-------------NRDAHSW------- 346
Query: 358 YQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEM 417
N ++ Y++ + AR F+ +K VSW+++I A+ + EA+ LFI M
Sbjct: 347 ------NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRM 400
Query: 418 KLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCI 477
+ G + D + ++L + L +H +L+ Y++CG I
Sbjct: 401 NIEGEKPDPHTLTSLLSASTGLVNLRLGMQMH-QIVVKTVIPDVPVHNALITMYSRCGEI 459
Query: 478 EMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLT 537
+R++FDE K +++I WN+MI Y+ HG + L+ MK + + P +TF+ +L
Sbjct: 460 MESRRIFDEMKL-KREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLN 518
Query: 538 ACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDA 597
AC ++GLVD+ K F M+ +Y +P EH++ +V++ GQ +EA II ++P D
Sbjct: 519 ACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDK 578
Query: 598 RVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFL 657
V+G LL AC+++++ LA VAA+ + +EP+++ YVLL N+YA G WD+ +++R +
Sbjct: 579 TVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNM 638
Query: 658 RDRGLKKTPGCSWLESN 674
+ +KK G SW++S+
Sbjct: 639 ESKRIKKERGSSWVDSS 655
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 201/459 (43%), Gaps = 37/459 (8%)
Query: 171 KNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVIN 229
++G++ A + E + WN MIS + +M + +LF M K ++ +T
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDV----VTWNT 107
Query: 230 LLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRND 289
++ V ++ + L + NT ++S Y K + +A L+FEKMP +
Sbjct: 108 MISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNT-MISGYAKNRRIGEALLLFEKMPERN 166
Query: 290 LVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHA 349
V W+ M++ + NG ++ L M P + + + +L W +
Sbjct: 167 AVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP-LCALVAGLIKNERLSEAAWVLGQYG 225
Query: 350 HVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITD---------------KTVVSW 394
++ +G + V +N LI Y + +AR +FD I D K VVSW
Sbjct: 226 SLV-SGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSW 284
Query: 395 SAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXX 454
++MIKA+ + A LF +MK T + + +I+ G +H R +
Sbjct: 285 NSMIKAYLKVGDVVSARLLFDQMKDRDT-ISWNTMID--------GYVHVSRMEDAFALF 335
Query: 455 XXXXXXXXXETSLLAS-YAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQC 513
+++ S YA G +E+AR F+ K+ K ++WNS+I+AY K+ ++ +
Sbjct: 336 SEMPNRDAHSWNMMVSGYASVGNVELARHYFE--KTPEKHTVSWNSIIAAYEKNKDYKEA 393
Query: 514 FELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVD 573
+L+ +M + KPD T LL+A ++GLV+ + + + P H ++
Sbjct: 394 VDLFIRMNIEGEKPDPHTLTSLLSA--STGLVNLRLGMQMHQIVVKTVIPDVPVHNALIT 451
Query: 574 LLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSD 612
+ R G+I E+ +I + + L + + ++ H +
Sbjct: 452 MYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGN 490
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 201/392 (51%), Gaps = 5/392 (1%)
Query: 303 NGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSV 362
G KE++ L++ SG++ + T + Q K GK++HA + G +
Sbjct: 89 TGRLKEAVGLLWS---SGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYL 145
Query: 363 HNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGT 422
L+ +Y+ L +A +F + + ++ W+AMI + E L ++ +M+
Sbjct: 146 KVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRI 205
Query: 423 RVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARK 482
D ++ + + L + + H +++L+ Y KC +
Sbjct: 206 VPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHR 265
Query: 483 LFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNS 542
+FD+ S +++I W S+IS Y HG+ + + + +MK +P+ VTFL +LTAC +
Sbjct: 266 VFDQ--LSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHG 323
Query: 543 GLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGP 602
GLVDKG E F M YG +P +H+A MVD LGRAG++ EA + + P V+G
Sbjct: 324 GLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGS 383
Query: 603 LLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGL 662
LL AC++H + +L E+AA K + ++P N GNYV+ +N YA+ G + +K+R + + G+
Sbjct: 384 LLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGV 443
Query: 663 KKTPGCSWLESNGQVHEFRVADQSHPRSVDIY 694
KK PG S +E G+VH F D SH S IY
Sbjct: 444 KKDPGYSQIELQGEVHRFMKDDTSHRLSEKIY 475
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 5/216 (2%)
Query: 219 NIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDA 278
++P + V LL+ G+ +H+ + V + LL +Y G L+ A
Sbjct: 105 QVEPETYAV--LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 279 RLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQL 338
++F + DL+ WN M+S Y G +E L + Y M ++ + PD +T + + L
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSAL 222
Query: 339 KHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMI 398
E GK+ HA +I+ + V +AL+DMY C+ + R+FD ++ + V++W+++I
Sbjct: 223 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLI 282
Query: 399 KAHAVHDQCLEALSLFIEMKLCGTR---VDFIIVIN 431
+ H + E L F +MK G R V F++V+
Sbjct: 283 SGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLT 318
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 107/213 (50%), Gaps = 2/213 (0%)
Query: 124 DEESCSFVLRSCFS-VSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL- 181
+ E+ + +L+ C + +GK +HAQ+ +G + ++ L+ LY +G L L
Sbjct: 107 EPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILF 166
Query: 182 EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLK 241
+ + +L WN MIS + G +E ++ MR+ I P+ T ++ R+ L L+
Sbjct: 167 RSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLE 226
Query: 242 IGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYA 301
G+ H+++I + + V++AL+ MY K S D +F+++ +++ W ++S Y
Sbjct: 227 HGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYG 286
Query: 302 GNGCPKESLELVYCMVRSGVRPDMFTAIPAISS 334
+G E L+ M G RP+ T + +++
Sbjct: 287 YHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTA 319
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 136/278 (48%), Gaps = 7/278 (2%)
Query: 29 TTSSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFT 85
T + LL C + + ++IHA+ F+ G N L KL+ Y G + +F
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSL 169
Query: 86 ENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGK 144
+ D + ++A++ Q G ++ LF+Y +M + + PD+ + + V R+C ++ E GK
Sbjct: 170 KIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGK 229
Query: 145 MVHAQIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTELAYWNNMISQAFESG 203
HA ++K + + +V ++LV++Y K + F + H + +S + W ++IS G
Sbjct: 230 RAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHG 289
Query: 204 KMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIG-QALHSLIIVSNLCGELTVN 262
K+ E + F +M++E +PN +T + +L + L+ G + +S+ + E
Sbjct: 290 KVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHY 349
Query: 263 TALLSMYVKLGSLKDARLMFEKMP-RNDLVVWNIMVSA 299
A++ + G L++A K P + VW ++ A
Sbjct: 350 AAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGA 387
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 206 bits (525), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 152/599 (25%), Positives = 275/599 (45%), Gaps = 57/599 (9%)
Query: 93 YSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQG-----KMVH 147
+S I+ L++FG L E++ PD +LR VS G + +H
Sbjct: 24 WSTIVPALARFGSI-GVLRAAVELINDGEKPDASPLVHLLR----VSGNYGYVSLCRQLH 78
Query: 148 AQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKME 206
+ K G + + NSL+ Y+ + L +AH+ + M ++ WN+++S +SG+ +
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 207 ECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNL-CGELTVNTAL 265
E LF + + ++ PN + L + LHL +G +HS ++ L G + V L
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCL 198
Query: 266 LSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDM 325
+ MY K G + DA L+F+ M D V WN +V++ + NG LEL PD
Sbjct: 199 IDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNG----KLELGLWFFHQMPNPDT 254
Query: 326 FTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDL 385
T +N LID + N+A ++
Sbjct: 255 VT-----------------------------------YNELIDAFVKSGDFNNAFQVLSD 279
Query: 386 ITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYV 445
+ + SW+ ++ + ++ EA F +M G R D + +L A + + +
Sbjct: 280 MPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWG 339
Query: 446 RYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYS 505
+H ++L+ Y+KCG ++ A +F K++I WN MIS Y+
Sbjct: 340 SLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMF--WTMPRKNLIVWNEMISGYA 397
Query: 506 KHGEWFQCFELYNQMKLSN-VKPDQVTFLGLLTACVNSGL-VDKGKEIFKEMVDLYGYQP 563
++G+ + +L+NQ+K +KPD+ TFL LL C + + ++ F+ M++ Y +P
Sbjct: 398 RNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKP 457
Query: 564 SQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKL 623
S EH ++ +G+ G++ +A ++I+ D + LL AC D + A+ A K+
Sbjct: 458 SVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKM 517
Query: 624 INM--EPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHEF 680
I + K+ Y+++SN+YA +W +V ++R +R+ G+ K G SW++S + +
Sbjct: 518 IELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWIDSRTKCSSY 576
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 205 bits (522), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 153/583 (26%), Positives = 276/583 (47%), Gaps = 52/583 (8%)
Query: 130 FVLRSCFSVSHEQGKMVHAQIVKLGMDAFD--LVRNSL--VELYEKNGFLNAHEPLEGMS 185
F L+ C V EQ K VHAQ+V + + LV +L + + +N L+G +
Sbjct: 8 FFLQRC--VVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFN 65
Query: 186 VTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQA 245
+ W ++ + K +E ++ M I P+S V ++LR+ + + G+
Sbjct: 66 GHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKP 125
Query: 246 LHSLIIVSNLCGELTVNTALLSMYVKLG-------------------------------S 274
+H+ + + LCG + V T L+ +Y +LG
Sbjct: 126 IHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGE 185
Query: 275 LKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCM-VRSGVRPDMFTAIPAIS 333
L +AR +F+K+P D V WN+++S+YA G + L M ++S ++
Sbjct: 186 LDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNC 245
Query: 334 SITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVS 393
+L T A +NG + +I Y+ + SA +F L++ K +
Sbjct: 246 REMKLART----YFDAMPQKNGVSWIT-----MISGYTKLGDVQSAEELFRLMSKKDKLV 296
Query: 394 WSAMIKAHAVHDQCLEALSLFIEMKLCGTRV--DFIIVINILPTFAKIGALHYVRYLHGY 451
+ AMI + + + +AL LF +M + + D I + +++ +++G + ++ Y
Sbjct: 297 YDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESY 356
Query: 452 XXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWF 511
TSL+ Y K G A K+F + KD +++++MI +G
Sbjct: 357 ITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSN--LNKKDTVSYSAMIMGCGINGMAT 414
Query: 512 QCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACM 571
+ L+ M + P+ VTF GLL+A +SGLV +G + F M D + +PS +H+ M
Sbjct: 415 EANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIM 473
Query: 572 VDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNA 631
VD+LGRAG+++EA ++I+++P+ +A V+G LL A +H++ E+A + +E
Sbjct: 474 VDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPT 533
Query: 632 GNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESN 674
G L+ IY++ G+WD +R ++++ L KT GCSW+E +
Sbjct: 534 GYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVEGS 576
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 183/411 (44%), Gaps = 39/411 (9%)
Query: 31 SSLLDLCTKPQHL---QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTEN 87
+S+L C K +++ + IHA+ +GL + + L+ Y++ G L++K F
Sbjct: 108 TSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAE 167
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEK---------SMYPDE----ESCSFV--- 131
++V ++++L + GE ++ ++ ++ EK S Y + +CS
Sbjct: 168 KNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAM 227
Query: 132 -LRSCFSVSHEQGKMVHAQIVKLGMDAFDLVRN-------SLVELYEKNGFLNAHEPL-E 182
L+S S + G V+ + +KL FD + +++ Y K G + + E L
Sbjct: 228 PLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFR 287
Query: 183 GMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKEN--IQPNSITVINLLRSTVDLHLL 240
MS + ++ MI+ ++GK ++ +LF++M + N IQP+ IT+ +++ + L
Sbjct: 288 LMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNT 347
Query: 241 KIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAY 300
G + S I + + ++T+L+ +Y+K G A MF + + D V ++ M+
Sbjct: 348 SFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGC 407
Query: 301 AGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWG----KQMHAHVIRNGS 356
NG E+ L M+ + P++ T +S+ + + G M H + +
Sbjct: 408 GINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSA 467
Query: 357 DYQVSVHNALIDMYSACNGLNSARRIF-DLITDKTVVSWSAMIKAHAVHDQ 406
D+ + ++DM L A + + W A++ A +H+
Sbjct: 468 DH----YGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNN 514
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 208/424 (49%), Gaps = 36/424 (8%)
Query: 294 NIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIR 353
N + AY + PK++L + ++R G PD +T + IS I + + GK H I+
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 354 NGSDYQVSVHNALIDMYSACNGLN-------------------------------SARRI 382
+G D + V N+L+ MY+ C L+ +A ++
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 383 FDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGAL 442
FD + DK ++SW+ MI A+ + ++SLF EM G + + ++ +L + L
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 443 HYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMIS 502
R +H +T+L+ Y KC + +AR++FD S ++ + WN MI
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDS--LSIRNKVTWNVMIL 324
Query: 503 AYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQ 562
A+ HG EL+ M ++PD+VTF+G+L C +GLV +G+ + MVD + +
Sbjct: 325 AHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIK 384
Query: 563 PSQEHHACMVDLLGRAGQIDEASKIIETVP---LNSDARVYGPLLSACKMHSDPRLAEVA 619
P+ H CM +L AG +EA + ++ +P + ++ + LLS+ + +P L E
Sbjct: 385 PNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESI 444
Query: 620 AQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHE 679
A+ LI +P N Y LL NIY+ G+W+ V ++R +++R + + PGC ++ VH
Sbjct: 445 AKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHG 504
Query: 680 FRVA 683
R+
Sbjct: 505 LRLG 508
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 155/351 (44%), Gaps = 49/351 (13%)
Query: 42 HLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVF-----YFTENPDSVIYSAI 96
HL Q+HAR G +SS + +L+ ++FG + ++ + NP ++ A
Sbjct: 37 HLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGKLYCANP---VFKAY 93
Query: 97 LRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFV-LRSCF--SVSHEQGKMVHAQIVKL 153
L + S ++ L Y +++ PD S +FV L SC + + GKM H Q +K
Sbjct: 94 LVSSSP----KQALGFYFDILRFGFVPD--SYTFVSLISCIEKTCCVDSGKMCHGQAIKH 147
Query: 154 GMDAFDLVRNSLVELYE-------------------------------KNG-FLNAHEPL 181
G D V+NSL+ +Y +NG L AH+
Sbjct: 148 GCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLF 207
Query: 182 EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLK 241
+ M + WN MIS + LF M + Q N T++ LL + LK
Sbjct: 208 DEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLK 267
Query: 242 IGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYA 301
G+++H+ +I + L + ++TAL+ MY K + AR +F+ + + V WN+M+ A+
Sbjct: 268 EGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHC 327
Query: 302 GNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVI 352
+G P+ LEL M+ +RPD T + + + G+ ++ ++
Sbjct: 328 LHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMV 378
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 97/177 (54%)
Query: 264 ALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRP 323
++++ V+ G + A +F++MP +++ WNIM+SAY G P S+ L MVR+G +
Sbjct: 189 SIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQG 248
Query: 324 DMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIF 383
+ T + +++ + + G+ +HA +IR + V + ALIDMY C + ARRIF
Sbjct: 249 NESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIF 308
Query: 384 DLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIG 440
D ++ + V+W+ MI AH +H + L LF M R D + + +L A+ G
Sbjct: 309 DSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAG 365
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 157/608 (25%), Positives = 273/608 (44%), Gaps = 48/608 (7%)
Query: 45 QIHARFFLHGLHQNSSLSSKLMDC-YTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQF 103
Q+H +GL + + C Y + L ++++VF ++ ++ L
Sbjct: 134 QLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHR 193
Query: 104 GEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDLVR 162
G ++ +F ++E+V E S VL+ V + K +H K G+D V
Sbjct: 194 GFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVV 253
Query: 163 NSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQ 221
NSL+ Y K G + E + + ++ WN +I +S + +LF M +
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313
Query: 222 PNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLM 281
PN T +++L + + LL G+ +H ++I + + + AL+ Y K G+L+D+RL
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLC 373
Query: 282 FEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISS--ITQLK 339
F+ + ++V WN ++S YA P L L M++ G RP +T A+ S +T+L+
Sbjct: 374 FDYIRDKNIVCWNALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQ 432
Query: 340 HTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKT--------- 390
Q+H+ ++R G + V ++L+ Y+ +N A + D + T
Sbjct: 433 ------QLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVA 486
Query: 391 -----------------------VVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFI 427
VSW+ I A + D E + LF M R D
Sbjct: 487 GIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKY 546
Query: 428 IVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLAS-YAKCGCIEMARKLFDE 486
++IL +K+ L +HG ++L Y KCG I K+F+E
Sbjct: 547 TFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEE 606
Query: 487 GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVD 546
+ K++I W ++IS HG + E + + KPD+V+F+ +LTAC + G+V
Sbjct: 607 TR--EKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVK 664
Query: 547 KGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSA 606
+G +F++M D YG +P +H+ C VDLL R G + EA +I +P +DA V+ L
Sbjct: 665 EGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDG 723
Query: 607 CKMHSDPR 614
C ++ +
Sbjct: 724 CNRFAEEQ 731
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 160/604 (26%), Positives = 264/604 (43%), Gaps = 61/604 (10%)
Query: 32 SLLDLCTKPQHLQQIHARFFLHGLH--------QNSSLSSKLMDCYTKFGLPGLSQKVFY 83
SLL++C K + A LH L Q + + ++ Y K G L+ KVF
Sbjct: 17 SLLNVCRKAPSFARTKA---LHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFD 73
Query: 84 FTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQG 143
+ V ++ I++ S++G+ +K ++ EM P++ + S +L SC S+ G
Sbjct: 74 QMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASLDVRAG 132
Query: 144 KMVHAQIVKLGM---DAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQA 199
+H +K G+ DAF V L+ LY + L A + E M L WN+M+S
Sbjct: 133 TQLHGLSLKYGLFMADAF--VGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLL 190
Query: 200 FESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGEL 259
G ++EC F + + + + +L+ + L I + LH L E+
Sbjct: 191 GHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEI 250
Query: 260 TVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRS 319
+V +L+S Y K G+ A MF+ D+V WN ++ A A + P ++L+L M
Sbjct: 251 SVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEH 310
Query: 320 GVRPDM--FTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLN 377
G P+ + ++ +SS+ QL G+Q+H +I+NG + + + NALID Y+ C L
Sbjct: 311 GFSPNQGTYVSVLGVSSLVQL--LSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLE 368
Query: 378 SARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPT-- 435
+R FD I DK +V W+A++ +A D + LSLF++M G R L +
Sbjct: 369 DSRLCFDYIRDKNIVCWNALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYTFSTALKSCC 427
Query: 436 FAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFD--EGKSS--- 490
++ LH V GY +SL+ SYAK + A L D G +S
Sbjct: 428 VTELQQLHSVIVRMGYEDNDYVL------SSLMRSYAKNQLMNDALLLLDWASGPTSVVP 481
Query: 491 -------------------------HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNV 525
D ++WN I+A S+ + EL+ M SN+
Sbjct: 482 LNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNI 541
Query: 526 KPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEAS 585
+PD+ TF+ +L+ C + G I + ++D+ G+ G I
Sbjct: 542 RPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVM 601
Query: 586 KIIE 589
K+ E
Sbjct: 602 KVFE 605
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 189/427 (44%), Gaps = 44/427 (10%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQF 103
+Q+H GL S+ + L+ Y K G +++++F + D V ++AI+ ++
Sbjct: 235 KQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKS 294
Query: 104 GEHEKTLFLYKEMVEKSMYPDEESCSFVLR-SCFSVSHEQGKMVHAQIVKLGMDAFDLVR 162
K L L+ M E P++ + VL S G+ +H ++K G + ++
Sbjct: 295 ENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLG 354
Query: 163 NSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQ 221
N+L++ Y K G L ++ + + + WN ++S + + C LF +M + +
Sbjct: 355 NALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLS-GYANKDGPICLSLFLQMLQMGFR 413
Query: 222 PNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLM 281
P T L+S L Q LHS+I+ V ++L+ Y K + DA L+
Sbjct: 414 PTEYTFSTALKSCCVTEL----QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLL 469
Query: 282 FE--------------------------------KMPRNDLVVWNIMVSAYAGNGCPKES 309
+ + + D V WNI ++A + + +E
Sbjct: 470 LDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEV 529
Query: 310 LELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVS---VHNAL 366
+EL M++S +RPD +T + +S ++L G +H + + +D+ + V N L
Sbjct: 530 IELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITK--TDFSCADTFVCNVL 587
Query: 367 IDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDF 426
IDMY C + S ++F+ +K +++W+A+I +H EAL F E G + D
Sbjct: 588 IDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDR 647
Query: 427 IIVINIL 433
+ I+IL
Sbjct: 648 VSFISIL 654
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 188/358 (52%), Gaps = 11/358 (3%)
Query: 317 VRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGL 376
+R G+ D+FT I + + + Q+ V +N LID +
Sbjct: 144 LRFGLLSDLFTLNTLIRVYSLIAPIDSALQL----FDENPQRDVVTYNVLIDGLVKAREI 199
Query: 377 NSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTF 436
AR +FD + + +VSW+++I +A + C EA+ LF EM G + D + +++ L
Sbjct: 200 VRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSAC 259
Query: 437 AKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIA 496
A+ G + +H Y T L+ YAKCG I+ A ++F+ S K +
Sbjct: 260 AQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFE--LCSDKTLFT 317
Query: 497 WNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMV 556
WN+MI+ + HG + + +M S +KPD VTF+ +L C +SGLVD+ + +F +M
Sbjct: 318 WNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMR 377
Query: 557 DLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDAR----VYGPLLSACKMHSD 612
LY +H+ CM DLLGRAG I+EA+++IE +P + R + LL C++H +
Sbjct: 378 SLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGN 437
Query: 613 PRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFL-RDRGLKKTPGCS 669
+AE AA ++ + P++ G Y ++ +YA A +W++V K+R + RD+ +KK G S
Sbjct: 438 IEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFS 495
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/505 (22%), Positives = 199/505 (39%), Gaps = 99/505 (19%)
Query: 29 TTSSLLDLCTKPQHLQQIHARFFLHG-----LHQNSSLSSKLMDCYTKFGLPGLSQKV-- 81
+ S LL LC +HL Q HA+F G QNS ++ L + S++V
Sbjct: 6 SCSYLLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVS 65
Query: 82 -----FYFTENPDSVIYSAILRNLSQFGEHEKTLF----LYKEMVEKSMYPDEESCSFVL 132
F F NP + ++ I+R + HE + + EM +S+ PD + FV
Sbjct: 66 YATSVFRFITNPSTFCFNTIIRICTL---HEPSSLSSKRFFVEMRRRSVPPDFHTFPFVF 122
Query: 133 RSCFSVSHEQG-----KMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVT 187
++C + + G K +H Q ++ G+ L +L+ N + + +
Sbjct: 123 KAC--AAKKNGDLTLVKTLHCQALRFGL---------LSDLFTLNTLIRVYSLI------ 165
Query: 188 ELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALH 247
++ QLF EN Q + +T
Sbjct: 166 ---------------APIDSALQLFD----ENPQRDVVTY-------------------- 186
Query: 248 SLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPK 307
L+ VK + AR +F+ MP DLV WN ++S YA +
Sbjct: 187 ---------------NVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCR 231
Query: 308 ESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALI 367
E+++L MV G++PD + +S+ Q + GK +H + R + L+
Sbjct: 232 EAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLV 291
Query: 368 DMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFI 427
D Y+ C +++A IF+L +DKT+ +W+AMI A+H + F +M G + D +
Sbjct: 292 DFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGV 351
Query: 428 IVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLAS-YAKCGCIEMARKLFDE 486
I++L + G + R L +A + G IE A ++ ++
Sbjct: 352 TFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQ 411
Query: 487 ---GKSSHKDIIAWNSMISAYSKHG 508
+ + ++AW+ ++ HG
Sbjct: 412 MPKDGGNREKLLAWSGLLGGCRIHG 436
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 197/417 (47%), Gaps = 40/417 (9%)
Query: 292 VWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHV 351
V+N ++ +Y G K SL L M+ S V+P+ T I + +G +H
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 352 IRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITD----------------------- 388
++ G + V + + Y L S+R++FD I +
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 389 --------KTVVSWSAMIKAHAVHDQCLEALSLFIEM------KLCGTRVDFIIVINILP 434
VVSW+ +I + +AL +F EM + F+ V++
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 435 TFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDI 494
F + G + + +HGY T+LL Y K G +EMA +FD+ + K +
Sbjct: 233 NFDQ-GGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRD--KKV 289
Query: 495 IAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKE 554
AWN++ISA + +G Q E++ MK S V P+ +T L +LTAC S LVD G ++F
Sbjct: 290 CAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSS 349
Query: 555 MVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPR 614
+ Y P+ EH+ C+VDL+GRAG + +A+ I+++P DA V G LL ACK+H +
Sbjct: 350 ICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTE 409
Query: 615 LAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWL 671
L ++LI ++P++ G YV LS A W + KMR + + G++K P S L
Sbjct: 410 LGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 145/307 (47%), Gaps = 41/307 (13%)
Query: 92 IYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESC-SFVLRSCFSVSHEQGKMVHAQI 150
+Y+ ++R+ GE++ +L L+ M+ + P+ + S + +C S S G +H Q
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 151 VKLGM--DAF---DLVR--------------------------NSLVELYEKNGFLN-AH 178
+K G D F VR NSL++ +NG ++ A
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 179 EPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRM---RKENIQPNSITVINLLRSTV 235
E + M VT++ W +I+ + G + +F M + I PN T +++L S
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 236 --DLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVW 293
D +++G+ +H ++ + T+ TALL MY K G L+ A +F+++ + W
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 294 NIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIR 353
N ++SA A NG PK++LE+ M S V P+ T + +++ + K + G Q+ + +
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSIC- 351
Query: 354 NGSDYQV 360
S+Y++
Sbjct: 352 --SEYKI 356
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 126/283 (44%), Gaps = 36/283 (12%)
Query: 192 WNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLII 251
+N +I +G+ + LF+ M ++QPN++T +L+++ + G ALH +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 252 VSNLCGELTVNTALLSMYVKLGSLKDARLM------------------------------ 281
+ V T+ + Y ++G L+ +R M
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 282 -FEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMV---RSGVRPDMFTAIPAISSITQ 337
F++MP D+V W +++ ++ G ++L + M+ R+ + P+ T + +SS
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 338 LKH--TEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWS 395
GKQ+H +V+ ++ AL+DMY L A IFD I DK V +W+
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 396 AMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAK 438
A+I A A + + +AL +F MK + I ++ IL A+
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACAR 336
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 101/219 (46%), Gaps = 20/219 (9%)
Query: 83 YFTENP--DSVIYSAILRNLSQFGEHEKTLFLYKEMVEKS---MYPDEESCSFVLRSCFS 137
YF P D V ++ ++ S+ G H K L ++ EM++ + P+E + VL SC +
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 138 VSH---EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWN 193
GK +H ++ + + +L+++Y K G L A + + ++ WN
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 194 NMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVS 253
+IS +G+ ++ ++F M+ + PN IT++ +L + L+ +G + + S
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLG-----IQLFS 348
Query: 254 NLCGELTV------NTALLSMYVKLGSLKDARLMFEKMP 286
++C E + ++ + + G L DA + +P
Sbjct: 349 SICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLP 387
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 118/270 (43%), Gaps = 52/270 (19%)
Query: 389 KTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYL 448
KT ++ +I+++ + +L+LF M + + + +++ ++ Y L
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 449 HGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDE----------------GKSSH- 491
HG +TS + Y + G +E +RK+FD+ G++
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 492 ------------KDIIAWNSMISAYSKHGEWFQCFELYNQM---KLSNVKPDQVTFLGLL 536
D+++W ++I+ +SK G + ++ +M + + + P++ TF+ +L
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 537 TACVN--SGLVDKGKEIFKEMVDLYGYQPSQE------HHACMVDLLGRAGQIDEASKII 588
++C N G + GK+I +GY S+E ++D+ G+AG ++ A I
Sbjct: 229 SSCANFDQGGIRLGKQI-------HGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIF 281
Query: 589 ETVPLNSDARV--YGPLLSACKMHSDPRLA 616
+ + D +V + ++SA + P+ A
Sbjct: 282 DQI---RDKKVCAWNAIISALASNGRPKQA 308
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/511 (26%), Positives = 245/511 (47%), Gaps = 37/511 (7%)
Query: 193 NNMISQAFESGKMEECFQLFSRMRKENIQ-PNSITVINLLRSTVDLHLLKIGQALHSLII 251
+N+I G + L+ +R+ + P + +I L + + +G+ LHS I
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLI-LRACACVVPRVVLGKLLHSESI 73
Query: 252 VSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNG------- 304
+C ++ V ++L+SMY K G + AR +F++MP ++ WN M+ Y NG
Sbjct: 74 KFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASG 133
Query: 305 ------CPKESLELVYCMVRSGVRPDMFTAIPAISSIT-QLKHTE-WGKQMHAHV----- 351
+ ++ + + G R ++ A + +LK+ + W + +V
Sbjct: 134 LFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKM 193
Query: 352 ------IRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHD 405
+ + V + ++ Y ++ AR IF + + +V W+ +I +A +
Sbjct: 194 EDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNG 253
Query: 406 QCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXET 465
+A+ F M+ G D + V +IL A+ G L R +H
Sbjct: 254 YSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSN 313
Query: 466 SLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNV 525
+L+ YAKCG +E A +F+ S + + NSMIS + HG+ + E+++ M+ ++
Sbjct: 314 ALIDMYAKCGDLENATSVFE--SISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDL 371
Query: 526 KPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEAS 585
KPD++TF+ +LTACV+ G + +G +IF EM +P+ +H C++ LLGR+G++ EA
Sbjct: 372 KPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEAY 430
Query: 586 KIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNY-----VLLSNI 640
++++ + + + V G LL ACK+H D +AE K+I +Y +SN+
Sbjct: 431 RLVKEMHVKPNDTVLGALLGACKVHMDTEMAE-QVMKIIETAGSITNSYSENHLASISNL 489
Query: 641 YAAAGKWDKVAKMRSFLRDRGLKKTPGCSWL 671
YA +W +R + RGL+K+PG S L
Sbjct: 490 YAHTERWQTAEALRVEMEKRGLEKSPGLSSL 520
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/486 (23%), Positives = 210/486 (43%), Gaps = 88/486 (18%)
Query: 94 SAILRNLSQFGEHEKTLFLYKEMVEKSMY-PDEESCSFVLRSCFSVSHEQ--GKMVHAQI 150
S +++N G + L LY + + +Y P +LR+C V GK++H++
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPG--WVPLILRACACVVPRVVLGKLLHSES 72
Query: 151 VKLGMDAFDLVRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFESG------ 203
+K G+ + +V +SL+ +Y K G ++A + + M +A WN MI +G
Sbjct: 73 IKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLAS 132
Query: 204 --------------------------KMEECFQLFSRMRKE--NIQPNSITVINLLRSTV 235
++E+ +LF RM E N++ S+ +L V
Sbjct: 133 GLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSV----MLGVYV 188
Query: 236 DLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNI 295
+ ++ + I N V + ++S Y ++G + +AR +F ++ DLV+WN
Sbjct: 189 NNRKMEDARKFFEDIPEKN----AFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNT 244
Query: 296 MVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNG 355
+++ YA NG ++++ + M G PD T +S+ Q + G+++H+ + G
Sbjct: 245 LIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRG 304
Query: 356 SDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFI 415
+ V NALIDMY+ C L +A +F+ I+ ++V ++MI A+H + EAL +F
Sbjct: 305 IELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFS 364
Query: 416 EMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCG 475
M+ + D I I +L +HG G
Sbjct: 365 TMESLDLKPDEITFIAVLTA-----------CVHG------------------------G 389
Query: 476 CIEMARKLFDEGKSS--HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFL 533
+ K+F E K+ ++ + +I + G+ + + L +M +VKP+
Sbjct: 390 FLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM---HVKPNDTVLG 446
Query: 534 GLLTAC 539
LL AC
Sbjct: 447 ALLGAC 452
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 121/248 (48%), Gaps = 4/248 (1%)
Query: 49 RFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEK 108
+FF +N+ + S +M Y + G ++ +FY D VI++ ++ +Q G +
Sbjct: 198 KFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDD 257
Query: 109 TLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDLVRNSLVE 167
+ + M + PD + S +L +C + G+ VH+ I G++ V N+L++
Sbjct: 258 AIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALID 317
Query: 168 LYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSIT 226
+Y K G L NA E +SV +A N+MIS GK +E ++FS M +++P+ IT
Sbjct: 318 MYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEIT 377
Query: 227 VINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKM- 285
I +L + V L G + S + ++ + L+ + + G LK+A + ++M
Sbjct: 378 FIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMH 437
Query: 286 -PRNDLVV 292
ND V+
Sbjct: 438 VKPNDTVL 445
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 179/349 (51%), Gaps = 34/349 (9%)
Query: 355 GSDYQVSVHNALIDMYSACNGLNSARRIFD------------LIT--------------- 387
G + V V AL+ MY + A ++FD +IT
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 388 ----DKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLC-GTRVDFIIVINILPTFAKIGAL 442
++TVVSW+ +I +A D+ EA+ LF M C + + I ++ ILP +G L
Sbjct: 213 EKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDL 272
Query: 443 HYVRYLHGYXXXXXXXXXXXXET-SLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMI 501
+H Y T SL+ +YAKCGCI+ A K F E + K++++W +MI
Sbjct: 273 KMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMI 332
Query: 502 SAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKG-KEIFKEMVDLYG 560
SA++ HG + ++ M+ +KP++VT + +L AC + GL ++ E F MV+ Y
Sbjct: 333 SAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYK 392
Query: 561 YQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAA 620
P +H+ C+VD+L R G+++EA KI +P+ A V+ LL AC ++ D LAE
Sbjct: 393 ITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVT 452
Query: 621 QKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCS 669
+KL+ +E + G+YVL+SNI+ G++ + R + RG+ K PG S
Sbjct: 453 RKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHS 501
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 91/173 (52%), Gaps = 4/173 (2%)
Query: 265 LLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVR-SGVRP 323
+++ LG + A EKMP +V W ++ YA PKE++ L MV ++P
Sbjct: 195 MITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKP 254
Query: 324 DMFTAIPAISSITQLKHTEWGKQMHAHVIRNG-SDYQVSVHNALIDMYSACNGLNSARRI 382
+ T + + ++ L + +HA+V + G + V N+LID Y+ C + SA +
Sbjct: 255 NEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKF 314
Query: 383 FDLITD--KTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINIL 433
F I + K +VSW+ MI A A+H EA+S+F +M+ G + + + +I++L
Sbjct: 315 FIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVL 367
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 133/293 (45%), Gaps = 39/293 (13%)
Query: 152 KLGMDAFDLVRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFESGKMEE--C 208
KLG ++ V+ +LV +Y G ++AH+ + M WN MI+ G E+ C
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 209 FQ-----------------------------LFSRMRK-ENIQPNSITVINLLRSTVDLH 238
F LFSRM + I+PN IT++ +L + +L
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 239 LLKIGQALHSLIIVSNLCG-ELTVNTALLSMYVKLGSLKDARLMFEKMP--RNDLVVWNI 295
LK+ ++H+ + ++ V +L+ Y K G ++ A F ++P R +LV W
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 296 MVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQ--LKHTEWGKQMHAHVIR 353
M+SA+A +G KE++ + M R G++P+ T I +++ + L E+ + + V
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 354 NGSDYQVSVHNALIDMYSACNGLNSARRI-FDLITDKTVVSWSAMIKAHAVHD 405
V + L+DM L A +I ++ ++ V W ++ A +V+D
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYD 443
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 144/574 (25%), Positives = 266/574 (46%), Gaps = 88/574 (15%)
Query: 38 TKPQHLQQIHARFFL-HGLHQNSSLSSKLMDCYTKFGLPGL-SQKVFYFTENPDSVIYSA 95
T PQ L QIHA+ + + L + S +S+++ C T+ P ++ +F P+ + ++
Sbjct: 18 TFPQ-LNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNS 76
Query: 96 ILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMVHAQIVKLGM 155
+ + S+ L LY++ + PD S V++S + G + A + KLG
Sbjct: 77 MFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKS----AGRFGILFQALVEKLGF 132
Query: 156 DAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSR 214
VRN ++++Y K+ + +A + + +S + + WN MIS ++ G EE +LF
Sbjct: 133 FKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDM 192
Query: 215 MRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGS 274
M + ++ T +++ + K+
Sbjct: 193 MPENDV---------------------------------------VSWTVMITGFAKVKD 213
Query: 275 LKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISS 334
L++AR F++MP +V WN M+S YA NG +++L L M+R GVRP+ T + IS+
Sbjct: 214 LENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISA 273
Query: 335 ITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIF----------- 383
+ + + + V AL+DM++ C + SARRIF
Sbjct: 274 CSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVT 333
Query: 384 ---------------------DLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCG- 421
D + + VVSW+++I +A + Q A+ F +M G
Sbjct: 334 WNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGD 393
Query: 422 TRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMAR 481
++ D + +I++L + L + Y SL+ YA+ G + A+
Sbjct: 394 SKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAK 453
Query: 482 KLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVN 541
++FDE K +D++++N++ +A++ +G+ + L ++MK ++PD+VT+ +LTAC
Sbjct: 454 RVFDEMK--ERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNR 511
Query: 542 SGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLL 575
+GL+ +G+ IFK + + P +H+ACM DLL
Sbjct: 512 AGLLKEGQRIFKSIRN-----PLADHYACM-DLL 539
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/457 (20%), Positives = 194/457 (42%), Gaps = 49/457 (10%)
Query: 207 ECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALL 266
+ +L+ + + I P++ + +++S + G +L+ + V ++
Sbjct: 89 DVLRLYEQRSRCGIMPDAFSFPVVIKSAG-----RFGILFQALVEKLGFFKDPYVRNVIM 143
Query: 267 SMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMF 326
MYVK S++ AR +F+++ + WN+M+S Y G +E+ +L F
Sbjct: 144 DMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKL-------------F 190
Query: 327 TAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLI 386
+P + V +I ++ L +AR+ FD +
Sbjct: 191 DMMP--------------------------ENDVVSWTVMITGFAKVKDLENARKYFDRM 224
Query: 387 TDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVR 446
+K+VVSW+AM+ +A + +AL LF +M G R + + ++ + R
Sbjct: 225 PEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTR 284
Query: 447 YLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSK 506
L +T+LL +AKC I+ AR++F+E + ++++ WN+MIS Y++
Sbjct: 285 SLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNE-LGTQRNLVTWNAMISGYTR 343
Query: 507 HGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQE 566
G+ +L++ M NV V++ L+ ++G E F++M+D +P +
Sbjct: 344 IGDMSSARQLFDTMPKRNV----VSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEV 399
Query: 567 HHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINM 626
++ G ++ I++ + N S M++ A + M
Sbjct: 400 TMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
Query: 627 EPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLK 663
+ ++ +Y L +AA G + + S ++D G++
Sbjct: 460 KERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIE 496
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 104/226 (46%), Gaps = 3/226 (1%)
Query: 28 FTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTEN 87
F ++LLD+ K + +Q F G +N + ++ YT+ G ++++F
Sbjct: 300 FVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPK 359
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVE-KSMYPDEESCSFVLRSCFSVSH-EQGKM 145
+ V +++++ + G+ + +++M++ PDE + VL +C ++ E G
Sbjct: 360 RNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDC 419
Query: 146 VHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGK 204
+ I K + D SL+ +Y + G L A + M ++ +N + + +G
Sbjct: 420 IVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGD 479
Query: 205 MEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLI 250
E L S+M+ E I+P+ +T ++L + LLK GQ + I
Sbjct: 480 GVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 203/402 (50%), Gaps = 42/402 (10%)
Query: 230 LLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRND 289
LR+ + LK +H+ II NL + + L+S+ G + A L+F ++
Sbjct: 26 FLRTCSNFSQLK---QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPS 82
Query: 290 LVVWNIMVSAYAGNGCPKESLEL-VYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMH 348
WN+M+ + + N P+E+L L + M+ + D FT I + G Q+H
Sbjct: 83 TFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVH 142
Query: 349 AHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFD----------------LITD---- 388
I+ G V N L+D+Y C +S R++FD L+++
Sbjct: 143 GLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLD 202
Query: 389 -----------KTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFA 437
+ VVSW+AMI A+ + + EA LF M++ + + ++N+L
Sbjct: 203 SAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAST 262
Query: 438 KIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFD--EGKSSHKDII 495
++G+L R++H Y T+L+ Y+KCG ++ ARK+FD +GKS +
Sbjct: 263 QLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKS----LA 318
Query: 496 AWNSMISAYSKHGEWFQCFELYNQMKL-SNVKPDQVTFLGLLTACVNSGLVDKGKEIFKE 554
WNSMI++ HG + L+ +M+ ++V+PD +TF+G+L+AC N+G V G F
Sbjct: 319 TWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTR 378
Query: 555 MVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSD 596
M+ +YG P +EH+ACM+ LL +A ++++AS ++E++ + D
Sbjct: 379 MIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 173/370 (46%), Gaps = 35/370 (9%)
Query: 31 SSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDS 90
S L C+ L+QIH + H L + L +L+ + FG + VF ++P +
Sbjct: 24 SYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 91 VIYSAILRNLSQFGEHEKTLFLY-KEMVEKSMYPDEESCSFVLRSCF-SVSHEQGKMVHA 148
++ ++R+LS + + L L+ M+ D+ + FV+++C S S G VH
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 149 QIVKLGMDAFDLVRNSLVELYEKNGFLNA----HEPLEGMSV---TELAY---------- 191
+K G +N+L++LY K G ++ + + G S+ T + Y
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 192 ---------------WNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVD 236
W MI+ ++ + +E FQLF RM+ ++++PN T++NLL+++
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQ 263
Query: 237 LHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIM 296
L L +G+ +H + + + TAL+ MY K GSL+DAR +F+ M L WN M
Sbjct: 264 LGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSM 323
Query: 297 VSAYAGNGCPKESLELV-YCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNG 355
+++ +GC +E+L L + V PD T + +S+ + + G + +I+
Sbjct: 324 ITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVY 383
Query: 356 SDYQVSVHNA 365
+ HNA
Sbjct: 384 GISPIREHNA 393
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 182/345 (52%), Gaps = 19/345 (5%)
Query: 344 GKQMHAHVIRNGSDYQVS-VHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHA 402
G+ +H V + G Y+ + L+ Y+ L AR++FD + ++T V+W+AMI +
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYC 189
Query: 403 VHD-----QCLEALSLFIEMKLCGT--RVDFIIVINILPTFAKIGALHYVRYLHGYXXXX 455
H +A+ LF CG+ R ++ +L ++ G L +HGY
Sbjct: 190 SHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKL 249
Query: 456 XXX--XXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQC 513
T+L+ Y+KCGC+ A +F+ K K++ W SM + + +G +
Sbjct: 250 GFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKV--KNVFTWTSMATGLALNGRGNET 307
Query: 514 FELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVD 573
L N+M S +KP+++TF LL+A + GLV++G E+FK M +G P EH+ C+VD
Sbjct: 308 PNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVD 367
Query: 574 LLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAG- 632
LLG+AG+I EA + I +P+ DA + L +AC ++ + + E + L+ +E ++
Sbjct: 368 LLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKL 427
Query: 633 ------NYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKTPGCSWL 671
+YV LSN+ A GKW +V K+R +++R +K PG S++
Sbjct: 428 SGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 159/360 (44%), Gaps = 30/360 (8%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQK-----VFYFTENPDSVIYSAILR 98
+QIHA+ ++G H NS L KL+ Y S K VF +PD +++ +L+
Sbjct: 25 KQIHAQLVINGCHDNS-LFGKLIGHYCSKPSTESSSKLAHLLVFPRFGHPDKFLFNTLLK 83
Query: 99 NLSQFGEHEKTLFLYKEMVEKS--MYPDEESCSFVLRSCFSVSHEQ----GKMVHAQIVK 152
+ E ++ ++ KS +Y +E + FVL +C + G++VH + K
Sbjct: 84 ----CSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKK 139
Query: 153 LG-MDAFDLVRNSLVELYEKNGFLN-AHEPLEGMSVTELAYWNNMISQAFESGK------ 204
LG + +L+ +L+ Y KNG L A + + M WN MI + S K
Sbjct: 140 LGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG-GYCSHKDKGNHN 198
Query: 205 MEECFQLFSRMR--KENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTV- 261
+ LF R ++P T++ +L + LL+IG +H I E+ V
Sbjct: 199 ARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVF 258
Query: 262 -NTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG 320
TAL+ MY K G L +A +FE M ++ W M + A NG E+ L+ M SG
Sbjct: 259 IGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESG 318
Query: 321 VRPDMFTAIPAISSITQLKHTEWGKQMHAHV-IRNGSDYQVSVHNALIDMYSACNGLNSA 379
++P+ T +S+ + E G ++ + R G + + ++D+ + A
Sbjct: 319 IKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEA 378
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 214/415 (51%), Gaps = 12/415 (2%)
Query: 33 LLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPD 89
LL+LC++ + Q+H G+ N + S L+ Y + G + + F E D
Sbjct: 190 LLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKD 248
Query: 90 SVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ----GKM 145
+ ++A++ S+ G K + ++ M+ P+E + +L++C S E+ G+
Sbjct: 249 VISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKAC---SEEKALRFGRQ 305
Query: 146 VHAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGK 204
VH+ +VK + V SL+++Y K G + + + +GMS W ++I+ G
Sbjct: 306 VHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGF 365
Query: 205 MEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTA 264
EE LF M++ ++ N++TV+++LR+ + L +G+ LH+ II +++ + + +
Sbjct: 366 GEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGST 425
Query: 265 LLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPD 324
L+ +Y K G +DA + +++P D+V W M+S + G E+L+ + M++ GV P+
Sbjct: 426 LVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPN 485
Query: 325 MFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFD 384
FT A+ + + G+ +H+ +N + V V +ALI MY+ C ++ A R+FD
Sbjct: 486 PFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFD 545
Query: 385 LITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKI 439
+ +K +VSW AMI +A + C EAL L M+ G VD I IL T I
Sbjct: 546 SMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
Score = 166 bits (419), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 120/500 (24%), Positives = 232/500 (46%), Gaps = 6/500 (1%)
Query: 43 LQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQ 102
+++IHA Q + L+ + G ++KVF ++V ++A++ +
Sbjct: 101 IKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLK 160
Query: 103 FGEHEKTLFLYKEMVEKSM-YPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDAFDL 160
+G ++ L+++ V+ + + +E +L C + E G+ VH +VK+G+ +
Sbjct: 161 YGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNL-I 219
Query: 161 VRNSLVELYEKNGFL-NAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKEN 219
V +SLV Y + G L +A + M ++ W +IS G + +F M
Sbjct: 220 VESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHW 279
Query: 220 IQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDAR 279
PN TV ++L++ + L+ G+ +HSL++ + ++ V T+L+ MY K G + D R
Sbjct: 280 FLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCR 339
Query: 280 LMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLK 339
+F+ M + V W +++A+A G +E++ L M R + + T + + + +
Sbjct: 340 KVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVG 399
Query: 340 HTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIK 399
GK++HA +I+N + V + + L+ +Y C A + + + VVSW+AMI
Sbjct: 400 ALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMIS 459
Query: 400 AHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXX 459
+ EAL EM G + + L A +L R +H
Sbjct: 460 GCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALS 519
Query: 460 XXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQ 519
++L+ YAKCG + A ++FD K++++W +MI Y+++G + +L +
Sbjct: 520 NVFVGSALIHMYAKCGFVSEAFRVFD--SMPEKNLVSWKAMIMGYARNGFCREALKLMYR 577
Query: 520 MKLSNVKPDQVTFLGLLTAC 539
M+ + D F +L+ C
Sbjct: 578 MEAEGFEVDDYIFATILSTC 597
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 211/459 (45%), Gaps = 22/459 (4%)
Query: 144 KMVHAQIVKLGMDAFDLVRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFES 202
K +HA +K D N+L+ + G + A + + M W MI +
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 203 GKMEECFQLFSRMRKENIQ-PNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTV 261
G +E F LF K I+ N + LL ++G+ +H ++ + G L V
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIV 220
Query: 262 NTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGV 321
++L+ Y + G L A F+ M D++ W ++SA + G +++ + M+
Sbjct: 221 ESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWF 280
Query: 322 RPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARR 381
P+ FT + + ++ K +G+Q+H+ V++ V V +L+DMY+ C ++ R+
Sbjct: 281 LPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRK 340
Query: 382 IFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGA 441
+FD ++++ V+W+++I AHA EA+SLF MK + + V++IL +GA
Sbjct: 341 VFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGA 400
Query: 442 LHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMI 501
L + LH ++L+ Y KCG A + + S +D+++W +MI
Sbjct: 401 LLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPS--RDVVSWTAMI 458
Query: 502 SAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGY 561
S S G + + +M V+P+ T+ L AC NS + G+ I +
Sbjct: 459 SGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSI---------H 509
Query: 562 QPSQEHHA--------CMVDLLGRAGQIDEASKIIETVP 592
++++HA ++ + + G + EA ++ +++P
Sbjct: 510 SIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP 548
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 175/346 (50%), Gaps = 10/346 (2%)
Query: 265 LLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR-- 322
L+S V+LG L AR +F+ MP + V W M+ Y G E+ L V+ G+R
Sbjct: 123 LISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFT 182
Query: 323 -PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARR 381
MF + + S + E G+Q+H ++++ G + V ++L+ Y+ C L SA R
Sbjct: 183 NERMFVCLLNLCS--RRAEFELGRQVHGNMVKVGVGNLI-VESSLVYFYAQCGELTSALR 239
Query: 382 IFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGA 441
FD++ +K V+SW+A+I A + ++A+ +FI M + V +IL ++ A
Sbjct: 240 AFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKA 299
Query: 442 LHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMI 501
L + R +H TSL+ YAKCG I RK+FD S+++ + W S+I
Sbjct: 300 LRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFD--GMSNRNTVTWTSII 357
Query: 502 SAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGY 561
+A+++ G + L+ MK ++ + +T + +L AC + G + GKE+ +++
Sbjct: 358 AAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIK-NSI 416
Query: 562 QPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSAC 607
+ + + +V L + G+ +A +++ +P + D + ++S C
Sbjct: 417 EKNVYIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVVSWTAMISGC 461
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 162/320 (50%), Gaps = 5/320 (1%)
Query: 28 FTTSSLLDLCTKPQHLQ---QIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYF 84
FT S+L C++ + L+ Q+H+ + + + + LMD Y K G +KVF
Sbjct: 285 FTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDG 344
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ-G 143
N ++V +++I+ ++ G E+ + L++ M + + + + +LR+C SV G
Sbjct: 345 MSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLG 404
Query: 144 KMVHAQIVKLGMDAFDLVRNSLVELYEKNG-FLNAHEPLEGMSVTELAYWNNMISQAFES 202
K +HAQI+K ++ + ++LV LY K G +A L+ + ++ W MIS
Sbjct: 405 KELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSL 464
Query: 203 GKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN 262
G E M +E ++PN T + L++ + L IG+++HS+ ++ + V
Sbjct: 465 GHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVG 524
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
+AL+ MY K G + +A +F+ MP +LV W M+ YA NG +E+L+L+Y M G
Sbjct: 525 SALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFE 584
Query: 323 PDMFTAIPAISSITQLKHTE 342
D + +S+ ++ E
Sbjct: 585 VDDYIFATILSTCGDIELDE 604
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 127/542 (23%), Positives = 232/542 (42%), Gaps = 49/542 (9%)
Query: 63 SKLMDCYTK-------FGLPGLS-QKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYK 114
S L++CY + FG+ L ++ F F +++ + RNL E K + L +
Sbjct: 111 SGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNL----ECGKAVSLLR 166
Query: 115 EMVEKSMYPDEESCSFVLRS---------CFSVSHE-QGKMVHAQIVKLG--MDAFDLVR 162
EM S+ PD S + V+R +++E +G +V G +DAF
Sbjct: 167 EMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAF---- 222
Query: 163 NSLVELYEKNGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQP 222
++ E GFL + + G+ +L + ++I + G+++ LF + + P
Sbjct: 223 CKAGKMDEAMGFLKEMKFM-GLE-ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 223 NSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDA---- 278
+IT L+R L LK + +I + + T L+ +G K+A
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 279 RLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQL 338
LM EK + V +NI+++ +G +++E+V M + RPD T + +
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAK 400
Query: 339 KHTEWGKQMHAHVIRNGS--DYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSA 396
+ ++ ++++ S D V +NALI N L+ A I+DL+ +K +
Sbjct: 401 GDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK--LGAGD 458
Query: 397 MIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVIN------ILPTFAKIGALHYVRYLHG 450
+ + + + L+A + M+L D IV N ++ F K G L+ + L
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLC 518
Query: 451 YXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHK--DIIAWNSMISAYSKHG 508
LL+S K G ++ A +LF+E + + D++++N MI K G
Sbjct: 519 KMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAG 578
Query: 509 EWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHH 568
+ L M + + PD T+ L+ + G +D+ F +MVD G++P + H
Sbjct: 579 DIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD-SGFEP--DAH 635
Query: 569 AC 570
C
Sbjct: 636 IC 637
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 124/310 (40%), Gaps = 15/310 (4%)
Query: 290 LVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHA 349
LV W I++ A+ G E++ + M G+ D+ I + GK +
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFD 271
Query: 350 HVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDK----TVVSWSAMIKAH---A 402
V+ G +N LI + L A IF+ + ++ V +++ +I
Sbjct: 272 EVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVG 331
Query: 403 VHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXX 462
+ L+ L+L IE V + I+IN L K G + +
Sbjct: 332 KTKEALQLLNLMIEKDEEPNAVTYNIIINKL---CKDGLVADAVEIVELMKKRRTRPDNI 388
Query: 463 XETSLLASYAKCGCIEMARKLF----DEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYN 518
LL G ++ A KL + + D+I++N++I K Q ++Y+
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448
Query: 519 QMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRA 578
+ D+VT LL + + +G V+K E++K++ D + S + A M+D +
Sbjct: 449 LLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTA-MIDGFCKT 507
Query: 579 GQIDEASKII 588
G ++ A ++
Sbjct: 508 GMLNVAKGLL 517
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 477 IEMARKLFDEGKSS--HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLG 534
+E A +L +E K S ++ W +I A+ K G+ + +MK ++ D V +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 535 LLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIE 589
L+ + G +D+GK +F E+++ G P + ++ + GQ+ EAS+I E
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLE-RGDSPCAITYNTLIRGFCKLGQLKEASEIFE 306
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 159/352 (45%), Gaps = 22/352 (6%)
Query: 263 TALLSMYVKLGSLKDARLMFEKMP----RNDLVVWNIMVSAYAGNGCP-KESLELVYCMV 317
+AL+S Y + G ++A +F M R +LV +N ++ A G K+ + M
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 318 RSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLN 377
R+GV+PD T ++ ++ E + + + + V +N L+D ++
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 378 SARRIFDLITDK----TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINIL 433
A I + K VVS+S +I A + EAL+LF EM+ G +D + +L
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL 451
Query: 434 PTFAKIG----ALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKS 489
+ K+G AL +R + +LL Y K G + +K+F E K
Sbjct: 452 SIYTKVGRSEEALDILREM----ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 490 SH--KDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDK 547
H +++ ++++I YSK G + + E++ + K + ++ D V + L+ A +GLV
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 548 GKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIE--TVPLNSDA 597
+ EM G P+ + ++D GR+ +D ++ ++P +S A
Sbjct: 568 AVSLIDEMTK-EGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSA 618
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 152/339 (44%), Gaps = 14/339 (4%)
Query: 263 TALLSMYVKLGSLKDARLMFEKM----PRNDLVVWNIMVSAYAGNGCPKESLELVYCMVR 318
+A++S + G + A+ +FE N + ++ ++SAY +G +E++ + M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 319 SGVRPDMFTAIPAISSITQ--LKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGL 376
G+RP++ T I + + ++ + K + RNG N+L+ + S
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAK-FFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 377 NSARRIFDLITDK----TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINI 432
+AR +FD +T++ V S++ ++ A Q A + +M + + + +
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 433 LPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSS-- 490
+ FAK G L G +LL+ Y K G E A + E S
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 491 HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKE 550
KD++ +N+++ Y K G++ + +++ +MK +V P+ +T+ L+ GL + E
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535
Query: 551 IFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIE 589
IF+E G + ++ ++D L + G + A +I+
Sbjct: 536 IFREFKSA-GLRADVVLYSALIDALCKNGLVGSAVSLID 573
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 168/379 (44%), Gaps = 49/379 (12%)
Query: 56 HQNSSLSSKLMDCYTKFGLPGLSQKVF--YFTENPDSVIY--SAILRNLSQFGEHEKTLF 111
++ L+S ++ ++G +++++F F + +Y SA++ + G HE+ +
Sbjct: 230 NEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAIS 289
Query: 112 LYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMVHAQIVKL-------GMDAFDLVRNS 164
++ M E + P+ + + V+ +C +G M Q+ K G+ + NS
Sbjct: 290 VFNSMKEYGLRPNLVTYNAVIDAC-----GKGGMEFKQVAKFFDEMQRNGVQPDRITFNS 344
Query: 165 LVELYEKNGFLNAHEPL-EGMSVTELAY----WNNMISQAFESGKMEECFQLFSRMRKEN 219
L+ + + G A L + M+ + +N ++ + G+M+ F++ ++M +
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 404
Query: 220 IQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGEL----------TVNTALLSMY 269
I PN ++ STV K G+ +L NL GE+ + NT LLS+Y
Sbjct: 405 IMPNVVSY-----STVIDGFAKAGRFDEAL----NLFGEMRYLGIALDRVSYNT-LLSIY 454
Query: 270 VKLGSLKDARLMFEKMP----RNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDM 325
K+G ++A + +M + D+V +N ++ Y G E ++ M R V P++
Sbjct: 455 TKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNL 514
Query: 326 FTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDL 385
T I ++ + ++ G V +++ALID + SA + D
Sbjct: 515 LTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDE 574
Query: 386 ITDK----TVVSWSAMIKA 400
+T + VV+++++I A
Sbjct: 575 MTKEGISPNVVTYNSIIDA 593
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 157/386 (40%), Gaps = 63/386 (16%)
Query: 182 EGMSVTELAYWNNMISQAFESGKM----EECFQLFSRMRKENIQPNSITVINLLRSTVDL 237
+G T + Y N+I F GKM + L +M+ + I P++ T L+
Sbjct: 237 DGCKPTLITY--NVILNVF--GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRG 292
Query: 238 HLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRN----DLVVW 293
L + + + + + ALL +Y K K+A + +M N +V +
Sbjct: 293 SLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTY 352
Query: 294 NIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIR 353
N ++SAYA +G E++EL M G +PD+FT +S + E + +
Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN 412
Query: 354 NGSDYQVSVHNALIDMYSACNGLNSARRIFDLIT----DKTVVSWSAMIKAHAVHDQCLE 409
G + NA I MY +IFD I +V+W+ ++ + E
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 410 ALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLA 469
+F EMK G + TF +L++
Sbjct: 473 VSGVFKEMKRAG-------FVPERETF----------------------------NTLIS 497
Query: 470 SYAKCGCIEMA----RKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNV 525
+Y++CG E A R++ D G + D+ +N++++A ++ G W Q ++ +M+
Sbjct: 498 AYSRCGSFEQAMTVYRRMLDAGVTP--DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 526 KPDQVTFLGLLTACVNSGLVDKGKEI 551
KP+++T+ LL A N GKEI
Sbjct: 556 KPNELTYCSLLHAYAN------GKEI 575
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 106/563 (18%), Positives = 225/563 (39%), Gaps = 71/563 (12%)
Query: 88 PDSVIYSAILRNLSQFGEH-EKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVS-HEQGKM 145
P + Y+ IL + G K L ++M + PD + + ++ C S H++
Sbjct: 241 PTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQ 300
Query: 146 VHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSV----------TELAYWNNM 195
V ++ G + N+L+++Y K +H P E M V + +N++
Sbjct: 301 VFEEMKAAGFSYDKVTYNALLDVYGK-----SHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 196 ISQAFESGKMEECFQLFSRMRKENIQPNSITVINLL----RSTVDLHLLKIGQALHSLII 251
IS G ++E +L ++M ++ +P+ T LL R+ + I + + +
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 252 VSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMP----RNDLVVWNIMVSAYAGNGCPK 307
N+C T N A + MY G + +F+++ D+V WN +++ + NG
Sbjct: 416 KPNIC---TFN-AFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 308 ESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALI 367
E + M R+G P+ T IS+ ++ E ++ ++ G +S +N ++
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 368 DMYSACNGLNSARRIFDLITDK-------TVVS---------------------WSAMIK 399
+ + ++ + D T S +S +I+
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE 591
Query: 400 AHAVHDQCL-----------EALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYL 448
AV + L EA F E+K G D + +++ + + + +
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGV 651
Query: 449 HGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDE--GKSSHKDIIAWNSMISAYSK 506
Y SL+ +++ + ++ E K DII++N++I AY +
Sbjct: 652 LDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCR 711
Query: 507 HGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQE 566
+ ++++M+ S + PD +T+ + + + ++ + + M+ +G +P+Q
Sbjct: 712 NTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK-HGCRPNQN 770
Query: 567 HHACMVDLLGRAGQIDEASKIIE 589
+ +VD + + DEA +E
Sbjct: 771 TYNSIVDGYCKLNRKDEAKLFVE 793
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 116/281 (41%), Gaps = 47/281 (16%)
Query: 357 DYQVSVHNA----LIDMYSACNGLNSARRIFDLITDK----TVVSWSAMIKAHAVHDQCL 408
DYQ + N+ +I M ++SA +F+ + + V S++++I A A +
Sbjct: 166 DYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYR 225
Query: 409 EALSLFIEMKLCGTRVDFIIVINILPTFAKIGA-LHYVRYLHGYXXXXXXXXXXXXETSL 467
EA+++F +M+ G + I IL F K+G + + L +L
Sbjct: 226 EAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTL 285
Query: 468 LASYAKCGCIEMARKLFDEGKS-------------------SHK---------------- 492
+ + + A ++F+E K+ SH+
Sbjct: 286 ITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGF 345
Query: 493 --DIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKE 550
I+ +NS+ISAY++ G + EL NQM KPD T+ LL+ +G V+
Sbjct: 346 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 551 IFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETV 591
IF+EM + G +P+ + + G G+ E KI + +
Sbjct: 406 IFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 114/557 (20%), Positives = 231/557 (41%), Gaps = 39/557 (7%)
Query: 93 YSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMVHA---- 148
Y+ +LR L + + L+ EM+ K + P + ++ V + G VHA
Sbjct: 190 YNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLI----DVYSKGGLKVHALCWL 245
Query: 149 -QIVKLGMDAFDLVRNSLVELYEK-NGFLNAHEPLEGMSVTE---------LAY-WNNMI 196
++ K+GM ++ ++++Y+K F A E + S E +Y +N MI
Sbjct: 246 GKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMI 305
Query: 197 SQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLC 256
+SG+++E + F RM +E I P ++T ++ + + ++G+ + + C
Sbjct: 306 DTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIH--IYGNNGQLGEVTSLMKTMKLHC 363
Query: 257 GELT-VNTALLSMYVKLGSLKDARLMFEKMP----RNDLVVWNIMVSAYAGNGCPKESLE 311
T L+S++ K ++ A F++M + D V + ++ A++ +E+
Sbjct: 364 APDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEG 423
Query: 312 LVYCMVRSGVRPDMFT--AIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDM 369
L+ M V D +T A+ + ++ W HV N S ++A ID
Sbjct: 424 LIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSS---EGYSANIDA 480
Query: 370 YSACNGLNSARRIF---DLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDF 426
Y L+ A R+F + +TV+ ++ MIKA+ + C +A LF M G D
Sbjct: 481 YGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDK 540
Query: 427 IIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDE 486
++ A H R ++++S+ K G + MA +++ E
Sbjct: 541 CTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKE 600
Query: 487 --GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGL 544
+ D++ + +I+A++ G Q MK + + + V + L+ G
Sbjct: 601 MVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGY 660
Query: 545 VDKGKEIFKEMVDLYGYQ--PSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGP 602
+D+ + I+++++ P CM++L + +A I +++ +A +
Sbjct: 661 LDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTF 720
Query: 603 LLSACKMHSDPRLAEVA 619
+ C + R E
Sbjct: 721 AMMLCMYKKNGRFEEAT 737
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 115/621 (18%), Positives = 238/621 (38%), Gaps = 65/621 (10%)
Query: 33 LLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLS----QKVFYFTENP 88
+L K +++Q + G+ +S L+D Y+K GL + K+ P
Sbjct: 196 ILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQP 255
Query: 89 DSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESC--SFVLRSCFSVSHEQGKMV 146
D V +L+ + E +K +K+ D C S+ + + G++
Sbjct: 256 DEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIK 315
Query: 147 HA-----QIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTEL------AYWNNM 195
A ++++ G+ + N+++ +Y NG L L M +L +N +
Sbjct: 316 EASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSL--MKTMKLHCAPDTRTYNIL 373
Query: 196 ISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNL 255
IS ++ +E F M+ + ++P+ ++ LL + H+++ + L + + N+
Sbjct: 374 ISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNV 433
Query: 256 CGELTVNTALLSMYVKL----------------------------------GSLKDARLM 281
+ +AL MYV+ G L +A +
Sbjct: 434 EIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERV 493
Query: 282 F---EKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQL 338
F +++ + ++ +N+M+ AY + +++ EL M+ GV PD T + +
Sbjct: 494 FICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASA 553
Query: 339 KHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITD----KTVVSW 394
G+ + G + A+I + LN A ++ + + VV +
Sbjct: 554 DMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVY 613
Query: 395 SAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXX 454
+I A A +A+S MK G + +I +++ + K+G L ++
Sbjct: 614 GVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQ 673
Query: 455 XXXXXX---XXXETSLLASYAKCGCIEMARKLFDEGKS-SHKDIIAWNSMISAYSKHGEW 510
++ Y++ + A +FD K + + M+ Y K+G +
Sbjct: 674 SCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRF 733
Query: 511 FQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHAC 570
+ ++ QM+ + D +++ +L G + E FKEMV G QP
Sbjct: 734 EEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVS-SGIQPDDSTFKS 792
Query: 571 MVDLLGRAGQIDEASKIIETV 591
+ +L + G +A + IE +
Sbjct: 793 LGTILMKLGMSKKAVRKIEEI 813
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/501 (21%), Positives = 218/501 (43%), Gaps = 50/501 (9%)
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ--GKM 145
P V +S +L +++ + + + L ++M + + + S +L +CF +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS-ILINCFCRRSQLSLALA 137
Query: 146 VHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVT----ELAY------WNNM 195
V A+++KLG + + NSL+ NGF + + + +S+ E+ Y +N +
Sbjct: 138 VLAKMMKLGYEPDIVTLNSLL-----NGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTL 192
Query: 196 ISQAFESGKMEECFQLFSRMRKENIQPNSIT---VINLL--RSTVDLHL----------L 240
I F + E L RM + QP+ +T V+N L R +DL L +
Sbjct: 193 IHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKI 252
Query: 241 KIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAY 300
+ G +++ II + LC VN AL +++ + M K R ++V +N ++
Sbjct: 253 EPGVVIYNTIIDA-LCNYKNVNDAL-NLFTE---------MDNKGIRPNVVTYNSLIRCL 301
Query: 301 AGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQV 360
G ++ L+ M+ + P++ T I + + ++++ +I+ D +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 361 SVHNALIDMYSACNGLNSARRIFDLITDK----TVVSWSAMIKAHAVHDQCLEALSLFIE 416
+++LI+ + + L+ A+ +F+L+ K VV+++ +IK + E + LF E
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 417 MKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGC 476
M G + + ++ F + + + + LL G
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 477 IEMARKLFDEGKSS--HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLG 534
+E A +F+ + S DI +N MI K G+ ++L+ + L VKP+ VT+
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 535 LLTACVNSGLVDKGKEIFKEM 555
+++ GL ++ +F+EM
Sbjct: 542 MMSGFCRKGLKEEADALFREM 562
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/434 (19%), Positives = 180/434 (41%), Gaps = 52/434 (11%)
Query: 204 KMEECFQLFSRMRKENIQPNSITVINLLRSTVDLH----LLKIGQALHSLIIVSNL---- 255
K+++ LF M K P+ + LL + ++ ++ +G+ + +L I NL
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 256 ------C--GELTVNTALLSMYVKLG-------------------SLKDARLMFEKMP-- 286
C +L++ A+L+ +KLG + DA + +M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 287 --RNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWG 344
+ D +N ++ + E++ LV MV G +PD+ T ++ + + +
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 345 KQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDK----TVVSWSAMIKA 400
+ + + + V ++N +ID +N A +F + +K VV+++++I+
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 401 HAVHDQCLEA---LSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXX 457
+ + +A LS IE K+ V F +I+ F K G L L+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALID---AFVKEGKLVEAEKLYDEMIKRSI 357
Query: 458 XXXXXXETSLLASYAKCGCIEMARKLFDE--GKSSHKDIIAWNSMISAYSKHGEWFQCFE 515
+SL+ + ++ A+ +F+ K +++ +N++I + K + E
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 516 LYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLL 575
L+ +M + + VT+ L+ + D + +FK+MV G P ++ ++D L
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS-DGVLPDIMTYSILLDGL 476
Query: 576 GRAGQIDEASKIIE 589
G+++ A + E
Sbjct: 477 CNNGKVETALVVFE 490
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/285 (18%), Positives = 115/285 (40%), Gaps = 33/285 (11%)
Query: 87 NPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMV 146
NP+ V +SA++ + G+ + LY EM+++S+ PD + S ++ G +
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI---------NGFCM 373
Query: 147 HAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTELAYWNNMISQAFESGKME 206
H D D ++ + K+ F N + +N +I ++ +++
Sbjct: 374 H--------DRLDEAKHMFELMISKDCFPN------------VVTYNTLIKGFCKAKRVD 413
Query: 207 ECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALL 266
E +LF M + + N++T L+ Q + ++ + ++ + LL
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 267 SMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
G ++ A ++FE + R+ D+ +NIM+ G ++ +L + GV+
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 323 PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALI 367
P++ T +S + E + + G +N LI
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/546 (18%), Positives = 223/546 (40%), Gaps = 60/546 (10%)
Query: 52 LHGLHQNSSLSSKLMDCYTK-------FGLPGLSQKVFYFTENPDSVIYSAILRNLSQFG 104
L+G+ + + +++CY + F + G + K+ Y PD++ +S ++ G
Sbjct: 98 LNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGY---EPDTITFSTLVNGFCLEG 154
Query: 105 EHEKTLFLYKEMVEKSMYPDEESCSFVLRS-CFSVSHEQGKMVHAQIVKLGMDAFDLVRN 163
+ + L MVE PD + S ++ C + ++ ++V+ G ++
Sbjct: 155 RVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214
Query: 164 SLVELYEKNG----FLNAHEPLEGMSV-TELAYWNNMISQAFESGKMEECFQLFSRMRKE 218
++ K+G L+ +E ++ + ++ +I + G ++ LF+ M +
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 219 NIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDA 278
I+ + +T +L+ + G + +I N+ ++ +AL+ ++VK G L +A
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 279 RLMFEKMPRN----DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISS 334
+ ++ +M D + +N ++ + C E+ ++ MV G PD+ T I+S
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 335 ITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDK----T 390
+ K + G ++ + G +N L+ + LN+A+ +F + + +
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 391 VVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHG 450
VV++ ++ + + +AL +F +M+ + +G Y +HG
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQ---------------KSRMTLGIGIYNIIIHG 499
Query: 451 YXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEW 510
SL S + K D++ +N MI K G
Sbjct: 500 MCNASKVDDAW----SLFCSLSD--------------KGVKPDVVTYNVMIGGLCKKGSL 541
Query: 511 FQCFELYNQMKLSNVKPDQVTFLGLLTACV-NSGLVDKGKEIFKEMVDLYGYQPSQEHHA 569
+ L+ +MK PD T+ L+ A + SGL+ E+ +EM + G+
Sbjct: 542 SEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI-SSVELIEEM-KVCGFSADSSTIK 599
Query: 570 CMVDLL 575
++D+L
Sbjct: 600 MVIDML 605
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/311 (18%), Positives = 125/311 (40%), Gaps = 46/311 (14%)
Query: 289 DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMH 348
D + ++ +V+ + G E++ LV MV RPD+ T I+ + +
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 349 AHVIRNGSDYQVSVHNALIDMYSACNGLNSA------RRIFDLITDKTVVSWSAMIKAHA 402
++ G + +++ C NSA R++ + +VV +S +I +
Sbjct: 199 DRMVEYGFQPDEVTYGPVLN--RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 403 VHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXX 462
+ALSLF EM++ G + D +
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTY--------------------------------- 283
Query: 463 XETSLLASYAKCGCIEMARKLFDE--GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQM 520
+SL+ G + K+ E G++ D++ ++++I + K G+ + ELYN+M
Sbjct: 284 --SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Query: 521 KLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQ 580
+ PD +T+ L+ + + ++F MV G +P ++ +++ +A +
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS-KGCEPDIVTYSILINSYCKAKR 400
Query: 581 IDEASKIIETV 591
+D+ ++ +
Sbjct: 401 VDDGMRLFREI 411
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 133/327 (40%), Gaps = 15/327 (4%)
Query: 275 LKDARLMFEKM----PRNDLVVWNIMVSAYAGNGCPKESLELVYC--MVRSGVRPDMFTA 328
+ DA +FE M P + +N + SA A + L L +C M +G+ DM+T
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVART--KQYDLVLGFCKGMELNGIEHDMYTM 108
Query: 329 IPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITD 388
I+ + K + + + G + + L++ + ++ A + D + +
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 389 ----KTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHY 444
+V+ S +I + + EAL L M G + D + +L K G
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 445 VRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEG--KSSHKDIIAWNSMIS 502
L + ++ S K G + A LF+E K D++ ++S+I
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 503 AYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQ 562
G+W ++ +M N+ PD VTF L+ V G + + KE++ EM+ G
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI-TRGIA 347
Query: 563 PSQEHHACMVDLLGRAGQIDEASKIIE 589
P + ++D + + EA+++ +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFD 374
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 109/556 (19%), Positives = 228/556 (41%), Gaps = 66/556 (11%)
Query: 53 HGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTEN-----PDSVIYSAILRNLSQFGEHE 107
G+ SL +M Y K G PG + ++ N P Y+ +L L H+
Sbjct: 140 EGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHK 199
Query: 108 KTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKM-VHAQIVKLGMDAFDLVRNSLV 166
++ +M+ + + P + V+++ +V+ + + + K G ++ +L+
Sbjct: 200 VAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLI 259
Query: 167 ELYEKNGFLN-AHEPLEGM----SVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQ 221
K +N A + LE M V + +N++I + ++ E ++ +RM
Sbjct: 260 HSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFA 319
Query: 222 PNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLM 281
P+ IT L+ + LC K+G + A+ +
Sbjct: 320 PDDITYGYLM---------------------NGLC--------------KIGRVDAAKDL 344
Query: 282 FEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHT 341
F ++P+ ++V++N ++ + +G ++ ++ MV S + +P + + L +
Sbjct: 345 FYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS------YGIVPDVCTYNSLIYG 398
Query: 342 EWGKQMHA------HVIRN-GSDYQVSVHNALIDMYSACNGLNSARRIFDLIT----DKT 390
W + + H +RN G V + L+D + ++ A + + ++
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
Query: 391 VVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHG 450
V ++ +I A + EA+ +F EM G + D +++ ++ + + +L
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518
Query: 451 YXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEG--KSSHKDIIAWNSMISAYSKHG 508
+L+ ++ + G I+ ARKL +E + S D I +NS+I + G
Sbjct: 519 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578
Query: 509 EWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHH 568
E + L+ +M P ++ L+ SG+V++ E KEMV L G P
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV-LRGSTPDIVTF 637
Query: 569 ACMVDLLGRAGQIDEA 584
+++ L RAG+I++
Sbjct: 638 NSLINGLCRAGRIEDG 653
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 195/473 (41%), Gaps = 52/473 (10%)
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCS-FVLRSC-FSVSHEQGKM 145
P+SVIY ++ +LS+ + L L +EM PD E+ + +L C F +E KM
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM 309
Query: 146 VHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL-EGMSVTELAYWNNMISQAFESGK 204
V+ +++ G D+ L+ K G ++A + L + E+ +N +I G+
Sbjct: 310 VNRMLIR-GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGR 368
Query: 205 MEECFQLFSRMRKE-NIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN- 262
+++ + S M I P+ T +L+ L +G AL L + N + V
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL--VGLALEVLHDMRNKGCKPNVYS 426
Query: 263 -TALLSMYVKLGSLKDARLMFEKMPRNDL----VVWNIMVSAYAGNGCPKESLELVYCMV 317
T L+ + KLG + +A + +M + L V +N ++SA+ E++E+ M
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Query: 318 RSGVRPDMFT---AIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACN 374
R G +PD++T I + + ++KH W L DM S
Sbjct: 487 RKGCKPDVYTFNSLISGLCEVDEIKHALW---------------------LLRDMISEGV 525
Query: 375 GLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILP 434
N+ V+++ +I A + EA L EM G+ +D I +++
Sbjct: 526 VANT-------------VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 435 TFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEG--KSSHK 492
+ G + R L L+ + G +E A + E + S
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 632
Query: 493 DIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLV 545
DI+ +NS+I+ + G ++ +++ + PD VTF L++ G V
Sbjct: 633 DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV 685
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 167/404 (41%), Gaps = 69/404 (17%)
Query: 49 RFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEK 108
R + G + LM+ K G ++ +FY P+ VI++ ++ G +
Sbjct: 312 RMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDD 371
Query: 109 TLFLYKEMVEK-SMYPDEESCSFVLRSCFSVSHEQGKMVHAQIVKLGMDAFDLVRNS--- 164
+ +MV + PD C++ S ++G +V L ++ +RN
Sbjct: 372 AKAVLSDMVTSYGIVPD--VCTY--NSLIYGYWKEG------LVGLALEVLHDMRNKGCK 421
Query: 165 --------LVELYEKNGFLN-AHEPLEGMSVTEL----AYWNNMISQAFESGKMEECFQL 211
LV+ + K G ++ A+ L MS L +N +IS + ++ E ++
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 212 FSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGE------LTVNTAL 265
F M ++ +P+ T +L+ L ++ + H+L ++ ++ E +T NT L
Sbjct: 482 FREMPRKGCKPDVYTFNSLISG-----LCEVDEIKHALWLLRDMISEGVVANTVTYNT-L 535
Query: 266 LSMYVKLGSLKDAR-----LMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG 320
++ +++ G +K+AR ++F+ P D + +N ++ G ++ L M+R G
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPL-DEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 321 VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSAR 380
P + I+ + + E + ++ GS + N+LI NGL A
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI------NGLCRAG 648
Query: 381 RIF----------------DLITDKTVVSWSAMIKAHAVHDQCL 408
RI D +T T++SW + K V+D CL
Sbjct: 649 RIEDGLTMFRKLQAEGIPPDTVTFNTLMSW--LCKGGFVYDACL 690
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 111/570 (19%), Positives = 236/570 (41%), Gaps = 65/570 (11%)
Query: 65 LMDCYTKFGLPGLSQKVFYFTENPDSVI-YSAILRNLSQFGEHEKTLFL---YKEMVEKS 120
LM+C ++G+ + ++F ++ VI ++ R L+ ++ + + ++
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211
Query: 121 MYPDEESC-SFVLRSCFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHE 179
+ P S FVL + F +G++ A +D LV +E + G ++ ++
Sbjct: 212 IEPSGVSAHGFVLDALFC----KGEVTKA------LDFHRLV----MERGFRVGIVSCNK 257
Query: 180 PLEGMSVTELAYWNNMISQAFE-------------------SGKMEECFQLFSRMRKENI 220
L+G+SV ++ + ++S + G+M+ F LF M + I
Sbjct: 258 VLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGI 317
Query: 221 QPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARL 280
+P+ I L+ +L +G L S + + ++ V ++ + +YVK G L A +
Sbjct: 318 EPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASV 377
Query: 281 MFEKM----PRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSIT 336
++++M ++V + I++ +G E+ + +++ G+ P + T I
Sbjct: 378 VYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFC 437
Query: 337 QLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKT----VV 392
+ + G ++ +I+ G V ++ L+D S + A R + ++ VV
Sbjct: 438 KCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVV 497
Query: 393 SWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYX 452
++++I ++ EAL +F M + G + D + T ++ + H
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD----VATFTTVMRVSIMEDAFCKHMKP 553
Query: 453 XXXXXXXXXXXETSLLASYA----------KCGCIEMARKLFD---EGKSSHKDIIAWNS 499
+ A A KC IE A K F+ EGK DI+ +N+
Sbjct: 554 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK-MEPDIVTYNT 612
Query: 500 MISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLY 559
MI Y + ++ +K++ P+ VT L+ + +D +F M +
Sbjct: 613 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE-K 671
Query: 560 GYQPSQEHHACMVDLLGRAGQIDEASKIIE 589
G +P+ + C++D ++ I+ + K+ E
Sbjct: 672 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 701
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 103/514 (20%), Positives = 224/514 (43%), Gaps = 33/514 (6%)
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMV 146
P+ V + ++ + GE ++ L+K M ++ + PD + S ++ F G +
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 147 HAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL------EGMSVTELAYWNNMISQAF 200
+Q + G+ +V +S +++Y K+G L + +G+S + Y +I
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY-TILIKGLC 402
Query: 201 ESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELT 260
+ G++ E F ++ ++ K ++P+ +T +L+ L+ G AL+ +I ++
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 261 VNTALLSMYVKLG----SLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCM 316
+ L+ K G +++ + M + R ++VV+N ++ + E+L++ M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 317 VRSGVRPDM--FTAIPAISSITQ--LKHTE--WGKQMHAHVIRNGSDYQVSVHNALIDMY 370
G++PD+ FT + +S + KH + G Q+ + RN ++V N +I +
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 582
Query: 371 SACNGLNSARRIFD-LITDK---TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDF 426
C+ + A + F+ LI K +V+++ MI + + EA +F +K+ +
Sbjct: 583 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 642
Query: 427 IIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDE 486
+ + ++ K + + L+ ++K IE + KLF+E
Sbjct: 643 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 702
Query: 487 --GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGL 544
K I++++ +I K G + +++Q + + PD V + L+ G
Sbjct: 703 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 762
Query: 545 VDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRA 578
+ + +++ M+ G +P DLL RA
Sbjct: 763 LVEAALLYEHMLR-NGVKPD--------DLLQRA 787
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 96/504 (19%), Positives = 200/504 (39%), Gaps = 61/504 (12%)
Query: 53 HGLHQNSSLSSKLMDCYTKFGLPGLSQKVF----YFTENPDSVIYSAILRNLSQFGEHEK 108
G+ + S L+D Y K G+ G+ K+F + D V++S+ + + G+
Sbjct: 315 RGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLAT 374
Query: 109 TLFLYKEMVEKSMYPDEESCSFVLRS-CFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVE 167
+YK M+ + + P+ + + +++ C + ++ QI+K GM+ + +SL++
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 168 LYEKNGFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITV 227
+ K G L + A + +MI + P + +
Sbjct: 435 GFCKCGNLRSG----------FALYEDMIKMGY---------------------PPDVVI 463
Query: 228 INLLRSTVDLHLLKIGQALHSLIIVSNLCGE-----LTVNTALLSMYVKLGSLKDARLMF 282
+L VD L K G LH++ + G+ + V +L+ + +L +A +F
Sbjct: 464 YGVL---VD-GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 283 EKMP----RNDLVVW------NIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAI 332
M + D+ + +IM A+ + P L+L M R+ + D+ I
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVI 579
Query: 333 SSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLIT----D 388
+ + E + ++I + + +N +I Y + L+ A RIF+L+
Sbjct: 580 HLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG 639
Query: 389 KTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYL 448
V+ + +I ++ A+ +F M G++ + + ++ F+K + L
Sbjct: 640 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 699
Query: 449 HGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSH--KDIIAWNSMISAYSK 506
+ ++ K G ++ A +F + + D++A+ +I Y K
Sbjct: 700 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 759
Query: 507 HGEWFQCFELYNQMKLSNVKPDQV 530
G + LY M + VKPD +
Sbjct: 760 VGRLVEAALLYEHMLRNGVKPDDL 783
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 134/625 (21%), Positives = 232/625 (37%), Gaps = 145/625 (23%)
Query: 56 HQNSSLSSKLMDCYTKFGLPGLSQKVF----YFTENPDSVIYSAILRNLSQFGEHEKTLF 111
+ N S+ L+ Y + G+ S ++F + NP +AIL ++ + GE
Sbjct: 160 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219
Query: 112 LYKEMVEKSMYPDEESCSFVLRS-CFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYE 170
KEM+++ + PD + + ++ C S E+ + ++ K G + N+++ Y
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279
Query: 171 KNG-FLNAHEPLEGMSV----TELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSI 225
K G F A E L+ M ++ +N +I S ++ + + L MRK I PN +
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339
Query: 226 TVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMF--- 282
T L+ + + I L + ++ L AL+ ++ G+ K+A MF
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 283 --------------------------------EKMPRNDLVVWNI----MVSAYAGNGCP 306
+M RN + V I M+ NG
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 459
Query: 307 KESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNAL 366
E++ L+ M + G+ PD+ T I+ ++ + K++ + R G +++ L
Sbjct: 460 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 519
Query: 367 IDMYSAC--NGLNSARRIFD----------------LITD-------------------- 388
I Y+ C L A RI++ L+T
Sbjct: 520 I--YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 577
Query: 389 ---KTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYV 445
VS+ +I + + L+A S+F EM G PTF G
Sbjct: 578 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH----------PTFFTYG----- 622
Query: 446 RYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHK-----DIIAWNSM 500
SLL K G + A K KS H D + +N++
Sbjct: 623 --------------------SLLKGLCKGGHLREAEKFL---KSLHAVPAAVDTVMYNTL 659
Query: 501 ISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIF-----KEM 555
++A K G + L+ +M ++ PD T+ L+ SGL KGK + KE
Sbjct: 660 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI-----SGLCRKGKTVIAILFAKEA 714
Query: 556 VDLYGYQPSQEHHACMVDLLGRAGQ 580
P++ + C VD + +AGQ
Sbjct: 715 EARGNVLPNKVMYTCFVDGMFKAGQ 739
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 118/535 (22%), Positives = 209/535 (39%), Gaps = 96/535 (17%)
Query: 27 FFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTE 86
FFT SLL K HL++ A FL LH +P
Sbjct: 618 FFTYGSLLKGLCKGGHLRE--AEKFLKSLH----------------AVPA---------- 649
Query: 87 NPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMV 146
D+V+Y+ +L + + G K + L+ EMV++S+ PD S+ S S +GK V
Sbjct: 650 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD----SYTYTSLISGLCRKGKTV 705
Query: 147 HAQIVKLGMDA-FDLVRNSLVELYEKNGFLNAHEPLEGMSVTE----------LAYWNNM 195
A + +A +++ N ++ +G A + G+ E + N M
Sbjct: 706 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 765
Query: 196 ISQAFESGKMEECFQLFSRMRKENIQPNSITVINLL------RSTVDLHLLKIGQALHSL 249
I GK+E+ L M +N PN +T N+L R V L S+
Sbjct: 766 IDGYSRMGKIEKTNDLLPEMGNQNGGPN-LTTYNILLHGYSKRKDVSTSFL----LYRSI 820
Query: 250 IIVSNLCGELTVNTALL----SMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGC 305
I+ L +LT ++ +L S +++G LK + + D +N+++S NG
Sbjct: 821 ILNGILPDKLTCHSLVLGICESNMLEIG-LKILKAFICRGVEVDRYTFNMLISKCCANGE 879
Query: 306 PKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNA 365
+ +LV M G+ D T +S + + + + + + + G + +
Sbjct: 880 INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIG 939
Query: 366 LIDMYSACNGLNSARRIF-DLITDKTV---VSWSAMIKAHAVHDQCLEALSLFIEMKLCG 421
LI+ + +A + ++I K V+ SAM++A A + EA L
Sbjct: 940 LINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLL-------- 991
Query: 422 TRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMAR 481
+ F++ + ++PT A L ++ +G L + CG
Sbjct: 992 --LRFMLKMKLVPTIASFTTLMHLCCKNG---------NVIEALELRVVMSNCGL----- 1035
Query: 482 KLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLL 536
KL D++++N +I+ G+ FELY +MK + T+ L+
Sbjct: 1036 KL---------DLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1081
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 103/217 (47%), Gaps = 2/217 (0%)
Query: 415 IEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKC 474
IE+ G D + + + A + +L + + +H + +++ + +C
Sbjct: 225 IELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGEC 284
Query: 475 GCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLG 534
I A+++FD KD+ +W+ M+ AYS +G L+ +M +KP++ TFL
Sbjct: 285 SSITDAKRVFDH--MVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLT 342
Query: 535 LLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLN 594
+ AC G +++ F M + +G P EH+ ++ +LG+ G + EA + I +P
Sbjct: 343 VFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFE 402
Query: 595 SDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNA 631
A + + + ++H D L + + +++++P A
Sbjct: 403 PTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKA 439
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 20/226 (8%)
Query: 194 NMISQAFESGKMEECFQLFSR-MRKENIQ-------PNSITVINLLRSTVDLHLLKIGQA 245
N +++ +EE +L R + K+ I+ P+ + L S +L L+ +
Sbjct: 198 NQMNEVAPPPSVEEVMRLCQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKK 257
Query: 246 LHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGC 305
+H + S G+ +N ++SM+ + S+ DA+ +F+ M D+ W++M+ AY+ NG
Sbjct: 258 VHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGM 317
Query: 306 PKESLELVYCMVRSGVRPD------MFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQ 359
++L L M + G++P+ +F A + I + + + H I +++
Sbjct: 318 GDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEA-FLHFDSMKNEHGISPKTEHY 376
Query: 360 VSVHNALIDMYSACNGLNSARR-IFDLITDKTVVSWSAMIKAHAVH 404
+ V + + C L A + I DL + T W AM +H
Sbjct: 377 LGV----LGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLH 418
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Query: 307 KESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNAL 366
K+++EL+ G PD + S LK E K++H H +++ ++N +
Sbjct: 222 KDAIELL----DKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMV 277
Query: 367 IDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDF 426
I M+ C+ + A+R+FD + DK + SW M+ A++ + +AL LF EM G + +
Sbjct: 278 ISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNE 337
Query: 427 IIVINILPTFAKIGAL 442
+ + A +G +
Sbjct: 338 ETFLTVFLACATVGGI 353
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 113/595 (18%), Positives = 236/595 (39%), Gaps = 86/595 (14%)
Query: 65 LMDCYTKFGLPGLSQKVFYFTENPDSVI-YSAILRNLSQFGEHEKTLFL---YKEMVEKS 120
LM+C ++G+ + ++F ++ VI ++ R L+ ++ + + ++
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211
Query: 121 MYPDEESC-SFVLRSCFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHE 179
+ P S FVL + F +G++ A +D LV +E + G ++ ++
Sbjct: 212 IEPSGVSAHGFVLDALFC----KGEVTKA------LDFHRLV----MERGFRVGIVSCNK 257
Query: 180 PLEGMSVTELAYWNNMISQAFE-------------------SGKMEECFQLFSRMRKENI 220
L+G+SV ++ + ++S + G+M+ F LF M + I
Sbjct: 258 VLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGI 317
Query: 221 QPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARL 280
+P+ I L+ +L +G L S + + ++ V ++ + +YVK G L A +
Sbjct: 318 EPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASV 377
Query: 281 MFEKM----PRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSIT 336
++++M ++V + I++ +G E+ + +++ G+ P + T I
Sbjct: 378 VYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFC 437
Query: 337 QLKHTEWGKQMHAHVIRNGSD-----------------------------------YQVS 361
+ + G ++ +I+ G V
Sbjct: 438 KCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVV 497
Query: 362 VHNALIDMYSACNGLNSARRIFDLI----TDKTVVSWSAMIKAHAVHDQCLEALSLFIEM 417
V N+LID + N + A ++F L+ V +++ +++ + + EAL LF M
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM 557
Query: 418 KLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCI 477
G D + ++ F K L ++ KC I
Sbjct: 558 FKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRI 617
Query: 478 EMARKLFD---EGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLG 534
E A K F+ EGK DI+ +N+MI Y + ++ +K++ P+ VT
Sbjct: 618 EDASKFFNNLIEGK-MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 676
Query: 535 LLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIE 589
L+ + +D +F M + G +P+ + C++D ++ I+ + K+ E
Sbjct: 677 LIHVLCKNNDMDGAIRMFSIMAE-KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 730
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/498 (18%), Positives = 210/498 (42%), Gaps = 20/498 (4%)
Query: 53 HGLHQNSSLSSKLMDCYTKFGLPGLSQKVF----YFTENPDSVIYSAILRNLSQFGEHEK 108
G+ + S L+D Y K G+ G+ K+F + D V++S+ + + G+
Sbjct: 315 RGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLAT 374
Query: 109 TLFLYKEMVEKSMYPDEESCSFVLRS-CFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVE 167
+YK M+ + + P+ + + +++ C + ++ QI+K GM+ + +SL++
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 168 LYEKNGFLNA----HEPLEGMSVT-ELAYWNNMISQAFESGKMEECFQLFSRMRKENIQP 222
+ K G L + +E + M ++ + ++ + G M + +M ++I+
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 223 NSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMF 282
N + +L+ L+ + L+ + + ++ T ++ + + G L++A +F
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 283 EKMPR----NDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQL 338
+M + D + + ++ A+ + P L+L M R+ + D+ I + +
Sbjct: 555 FRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 614
Query: 339 KHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLIT----DKTVVSW 394
E + ++I + + +N +I Y + L+ A RIF+L+ V+
Sbjct: 615 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 674
Query: 395 SAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXX 454
+ +I ++ A+ +F M G++ + + ++ F+K + L
Sbjct: 675 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 734
Query: 455 XXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSH--KDIIAWNSMISAYSKHGEWFQ 512
+ ++ K G ++ A +F + + D++A+ +I Y K G +
Sbjct: 735 KGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVE 794
Query: 513 CFELYNQMKLSNVKPDQV 530
LY M + VKPD +
Sbjct: 795 AALLYEHMLRNGVKPDDL 812
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 106/552 (19%), Positives = 222/552 (40%), Gaps = 85/552 (15%)
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMV 146
P+ V + ++ + GE ++ L+K M ++ + PD + S ++ F G +
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 147 HAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL------EGMSVTELAYWNNMISQAF 200
+Q + G+ +V +S +++Y K+G L + +G+S + Y +I
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY-TILIKGLC 402
Query: 201 ESGKMEECFQLFSRMRKENIQPNSITVINL---------LRSTVDLH------------- 238
+ G++ E F ++ ++ K ++P+ +T +L LRS L+
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 239 --------LLKIGQALHSLIIVSNLCGE-----LTVNTALLSMYVKLGSLKDARLMFEKM 285
L K G LH++ + G+ + V +L+ + +L +A +F M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 286 P----RNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHT 341
+ D+ + ++ G +E+L L + M + G+ PD I + +
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP 582
Query: 342 EWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFD-LITDK---TVVSWSAM 397
G Q+ + RN ++V N +I + C+ + A + F+ LI K +V+++ M
Sbjct: 583 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 642
Query: 398 IKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXX 457
I + + EA +F +K V P + L +V
Sbjct: 643 ICGYCSLRRLDEAERIFELLK----------VTPFGPNTVTLTILIHV------------ 680
Query: 458 XXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELY 517
L + G I M + ++G S + + + ++ +SK + F+L+
Sbjct: 681 ---------LCKNNDMDGAIRMFSIMAEKG--SKPNAVTYGCLMDWFSKSVDIEGSFKLF 729
Query: 518 NQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGR 577
+M+ + P V++ ++ G VD+ IF + +D P +A ++ +
Sbjct: 730 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA-KLLPDVVAYAILIRGYCK 788
Query: 578 AGQIDEASKIIE 589
G++ EA+ + E
Sbjct: 789 VGRLVEAALLYE 800
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/425 (20%), Positives = 177/425 (41%), Gaps = 19/425 (4%)
Query: 193 NNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIV 252
N++++ ++ E L +M + QP+++T L+ + AL ++V
Sbjct: 149 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 208
Query: 253 SNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPKE 308
+L A+++ K G A + KM + D+V++N ++ +
Sbjct: 209 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD 268
Query: 309 SLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALID 368
+ +L M G++PD+FT P IS + ++ + ++ + + NALID
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 369 MYSACNGLNSARRIFD-LITDK----TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTR 423
+ L A +++D ++ K VV+++ +IK + + E + +F EM G
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Query: 424 VDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKL 483
+ + ++ F + + + LL G +E A +
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVV 448
Query: 484 FD--EGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVN 541
F+ + + DI+ + +MI A K G+ ++L+ + L VKP+ VT+ +++
Sbjct: 449 FEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
Query: 542 SGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEAS-----KIIETVPLNSD 596
GL ++ +F EM + G P+ + ++ R G DEA+ K + + D
Sbjct: 509 KGLKEEADALFVEMKE-DGPLPNSGTYNTLIRARLRDG--DEAASAELIKEMRSCGFAGD 565
Query: 597 ARVYG 601
A +G
Sbjct: 566 ASTFG 570
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/477 (19%), Positives = 195/477 (40%), Gaps = 53/477 (11%)
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCF--SVSHEQGKM 145
P V +++L + + L +MVE PD + + ++ F + + E +
Sbjct: 143 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 202
Query: 146 VHAQIVK---LGMDAFDLVRNSLVELYEKNGFLNAHEPLE-GMSVTELAYWNNMISQAFE 201
V +VK + + V N L + E + LN +E G ++ +N +I +
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK 262
Query: 202 SGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTV 261
M++ F LF++M + I+P+ T L+ + L S ++ N+ +L
Sbjct: 263 YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVF 322
Query: 262 NTALLSMYVKLGSLKDARLMFEKMPRN-----DLVVWNIMVSAYAGNGCPKESLELVYCM 316
AL+ +VK G L +A ++++M ++ D+V +N ++ + +E +E+ M
Sbjct: 323 FNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
Query: 317 VRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGL 376
+ G+ + T I Q + + + + ++ +G + +N L+D +
Sbjct: 383 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNV 442
Query: 377 NSARRIFDLITDK----TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINI 432
+A +F+ + + +V+++ MI+A + + LF + L G + + +
Sbjct: 443 ETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTY--- 499
Query: 433 LPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSH- 491
T++++ + + G E A LF E K
Sbjct: 500 --------------------------------TTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 492 -KDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDK 547
+ +N++I A + G+ EL +M+ D TF GL+T ++ G +DK
Sbjct: 528 LPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRLDK 583
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/413 (19%), Positives = 165/413 (39%), Gaps = 24/413 (5%)
Query: 194 NMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLH----LLKIGQALHSL 249
N+ + + K+++ LF M K P+ + LL + ++ ++ +G+ + +L
Sbjct: 45 NLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 104
Query: 250 IIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPR----NDLVVWNIMVSAYAGNGC 305
I NL + ++ + + L A + KM + +V N +++ +
Sbjct: 105 GISHNL----YTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 160
Query: 306 PKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNA 365
E++ LV MV G +PD T + + Q + ++ G + + A
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220
Query: 366 LIDMYSACN------GLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKL 419
+I+ C LN ++ + VV ++ +I + +A LF +M+
Sbjct: 221 VIN--GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMET 278
Query: 420 CGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEM 479
G + D ++ G L +L+ ++ K G +
Sbjct: 279 KGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVE 338
Query: 480 ARKLFDEG-KSSH--KDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLL 536
A KL+DE KS H D++A+N++I + K+ + E++ +M + + VT+ L+
Sbjct: 339 AEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLI 398
Query: 537 TACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIE 589
+ D + +FK+MV G P + ++D L G ++ A + E
Sbjct: 399 HGFFQARDCDNAQMVFKQMVS-DGVHPDIMTYNILLDGLCNNGNVETALVVFE 450
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/484 (20%), Positives = 199/484 (41%), Gaps = 82/484 (16%)
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRS-CFSVSHEQGKMV 146
PD + ++ ++ Q ++++ LY +++E P E++ + ++++ C + G +
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMA-----GLIE 207
Query: 147 HAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTEL-AYWNNMISQAFESGKM 205
A++V LVE+ N H + + VT AY ++ + G
Sbjct: 208 RAEVV-------------LVEMQ------NHHVSPKTIGVTVYNAYIEGLMKR---KGNT 245
Query: 206 EECFQLFSRMRKENIQPNSIT---VINLL-RSTVDLHLLKIGQALHSLIIVSNLCGELTV 261
EE +F RM+++ +P + T +INL +++ K+ + S N+C
Sbjct: 246 EEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC----T 301
Query: 262 NTALLSMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPKESLELVYCMV 317
TAL++ + + G + A +FE++ + D+ V+N ++ +Y+ G P + E+ M
Sbjct: 302 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 361
Query: 318 RSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLN 377
G PD + +N ++D Y +
Sbjct: 362 HMGCEPDR-----------------------------------ASYNIMVDAYGRAGLHS 386
Query: 378 SARRIFD----LITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINIL 433
A +F+ L T+ S ++ A++ + ++ EM G D ++ ++L
Sbjct: 387 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 446
Query: 434 PTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSH-- 491
+ ++G + + L+ Y K G +E +LF E K +
Sbjct: 447 NLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFR 506
Query: 492 KDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEI 551
D++ W S I AYS+ + +C E++ +M S PD T LL+AC + V++ +
Sbjct: 507 PDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSV 566
Query: 552 FKEM 555
+ M
Sbjct: 567 LRTM 570
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 149/346 (43%), Gaps = 13/346 (3%)
Query: 257 GELTVNTALLSMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPKESLEL 312
G N + + + G+ ++A +F++M R+ +N+M++ Y S +L
Sbjct: 227 GVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKL 286
Query: 313 VYCMVRS-GVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYS 371
YC +RS +P++ T +++ + E +++ + +G + V V+NAL++ YS
Sbjct: 287 -YCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYS 345
Query: 372 ACNGLNSARRIFDLIT----DKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFI 427
A IF L+ + S++ M+ A+ +A ++F EMK G
Sbjct: 346 RAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK 405
Query: 428 IVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEG 487
+ +L ++K + + S+L Y + G K+ E
Sbjct: 406 SHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 465
Query: 488 KSS--HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLV 545
++ DI +N +I+ Y K G + EL+ ++K N +PD VT+ + A L
Sbjct: 466 ENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLY 525
Query: 546 DKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETV 591
K E+F+EM+D G P ++ Q+++ + ++ T+
Sbjct: 526 VKCLEVFEEMID-SGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 570
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/485 (20%), Positives = 199/485 (41%), Gaps = 82/485 (16%)
Query: 87 NPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRS-CFSVSHEQGKM 145
PD + ++ ++ Q ++++ LY +++E P E++ + ++++ C + G +
Sbjct: 174 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMA-----GLI 228
Query: 146 VHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTEL-AYWNNMISQAFESGK 204
A++V LVE+ N H + + VT AY ++ + G
Sbjct: 229 ERAEVV-------------LVEMQ------NHHVSPKTIGVTVYNAYIEGLMKR---KGN 266
Query: 205 MEECFQLFSRMRKENIQPNSIT---VINLL-RSTVDLHLLKIGQALHSLIIVSNLCGELT 260
EE +F RM+++ +P + T +INL +++ K+ + S N+C
Sbjct: 267 TEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC---- 322
Query: 261 VNTALLSMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPKESLELVYCM 316
TAL++ + + G + A +FE++ + D+ V+N ++ +Y+ G P + E+ M
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 382
Query: 317 VRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGL 376
G PD + +N ++D Y
Sbjct: 383 QHMGCEPDR-----------------------------------ASYNIMVDAYGRAGLH 407
Query: 377 NSARRIFD----LITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINI 432
+ A +F+ L T+ S ++ A++ + ++ EM G D ++ ++
Sbjct: 408 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 467
Query: 433 LPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSH- 491
L + ++G + + L+ Y K G +E +LF E K +
Sbjct: 468 LNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF 527
Query: 492 -KDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKE 550
D++ W S I AYS+ + +C E++ +M S PD T LL+AC + V++
Sbjct: 528 RPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTS 587
Query: 551 IFKEM 555
+ + M
Sbjct: 588 VLRTM 592
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 149/346 (43%), Gaps = 13/346 (3%)
Query: 257 GELTVNTALLSMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPKESLEL 312
G N + + + G+ ++A +F++M R+ +N+M++ Y S +L
Sbjct: 249 GVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKL 308
Query: 313 VYCMVRS-GVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYS 371
YC +RS +P++ T +++ + E +++ + +G + V V+NAL++ YS
Sbjct: 309 -YCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYS 367
Query: 372 ACNGLNSARRIFDLIT----DKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFI 427
A IF L+ + S++ M+ A+ +A ++F EMK G
Sbjct: 368 RAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK 427
Query: 428 IVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEG 487
+ +L ++K + + S+L Y + G K+ E
Sbjct: 428 SHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 487
Query: 488 KSS--HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLV 545
++ DI +N +I+ Y K G + EL+ ++K N +PD VT+ + A L
Sbjct: 488 ENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLY 547
Query: 546 DKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETV 591
K E+F+EM+D G P ++ Q+++ + ++ T+
Sbjct: 548 VKCLEVFEEMID-SGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 592
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 100/494 (20%), Positives = 201/494 (40%), Gaps = 30/494 (6%)
Query: 73 GLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVL 132
G+ + K F NP+ + A R S + E +T FL+ S
Sbjct: 8 GIATSTAKGFRRVVNPNLLGGGAAARAFSDYREKLRTGFLH---------------SIRF 52
Query: 133 RSCFSVSHEQGKMVHAQIVKLGMDAFDLVRNSL-VELYEKNGFLNAHEPLEGMSVTELAY 191
F++ E MVH+Q + +D L+ + + YE + + L G+S +L
Sbjct: 53 EDAFALFFE---MVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGIS-HDLYS 108
Query: 192 WNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLII 251
+ +I ++ + +M K +P+ +T +LL ++ + +L L++
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 252 VSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPK 307
S + V L+ K G L A + +M + D+V +N +++ +G
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 308 ESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALI 367
++ ++ M++ + PD+ T I + + + ++++ +I++ D +N++I
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 368 DMYSACNGLNSARRIFDLITDK----TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTR 423
+ L A++ FDL+ K VV+++ +I E + LF M G
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 424 VDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKL 483
D ++ + ++G L + + LL G IE A
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 484 FDEGKSSHK--DIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVN 541
FD+ + S K I+A+N MI K + + +EL+ ++ + VKPD T+ ++
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
Query: 542 SGLVDKGKEIFKEM 555
+G + E+ + M
Sbjct: 469 NGPRREADELIRRM 482
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 466 SLLASYAKCGCIEMARKLFDE--GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLS 523
+L+ K G + +A +L +E K D++ +N++++ G W + M
Sbjct: 181 TLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR 240
Query: 524 NVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDE 583
++ PD VTF L+ V G +D+ +E++KEM+ P+ + +++ L G++ +
Sbjct: 241 SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ-SSVDPNNVTYNSIINGLCMHGRLYD 299
Query: 584 ASKIIE 589
A K +
Sbjct: 300 AKKTFD 305
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/307 (19%), Positives = 124/307 (40%), Gaps = 10/307 (3%)
Query: 307 KESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNAL 366
+++ L + MV S P + +++ L+ E + G + + L
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 367 IDMYSACNGLNSA----RRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGT 422
I + C+ L+ A ++ L + ++V++ +++ + ++ +A SL I M G
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 423 RVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCG-CIEMAR 481
+ ++ ++ K G L+ L +LL G + AR
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 482 KLFDEGKSS-HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACV 540
L D K S + D++ + ++I + K G + ELY +M S+V P+ VT+ ++
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 541 NSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVP---LNSDA 597
G + K+ F M G P+ + ++ + +DE K+ + + N+D
Sbjct: 293 MHGRLYDAKKTFDLMAS-KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 598 RVYGPLL 604
Y L+
Sbjct: 352 FTYNTLI 358
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 151/347 (43%), Gaps = 15/347 (4%)
Query: 254 NLCGELTVNTALLSMYVKLGSLKDAR----LMFEKMPRNDLVVWNIMVSAYAGNGCPKES 309
+C + ++ +LG +K+A LM K D++ ++ +V+ Y G +
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 310 LELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDM 369
+L+ M R G++P+ + I + ++ ++ + +IR G V+ LID
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 370 YSACNGLNSARRIF------DLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTR 423
+ + +A + F D+ D V++++A+I +EA LF EM G
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPD--VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 424 VDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKL 483
D + ++ + K G + +H + T+L+ K G ++ A +L
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 484 FDE--GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVN 541
E +I +NS+++ K G + +L + + + + D VT+ L+ A
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Query: 542 SGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKII 588
SG +DK +EI KEM+ G QP+ +++ G +++ K++
Sbjct: 539 SGEMDKAQEILKEMLG-KGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/393 (19%), Positives = 160/393 (40%), Gaps = 48/393 (12%)
Query: 203 GKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN 262
G++++ ++L M+++ ++PNS +++ + L + S +I + + V
Sbjct: 295 GELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVY 354
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRNDL----VVWNIMVSAYAGNGCPKESLELVYCMVR 318
T L+ + K G ++ A F +M D+ + + ++S + G E+ +L + M
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 319 SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNS 378
G+ PD T I+ + H + ++H H+I+ G V + LID L+S
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 379 ARRI----FDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILP 434
A + + + + ++++++ EA+ L E + G D +
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY----- 529
Query: 435 TFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDE--GKSSHK 492
T+L+ +Y K G ++ A+++ E GK
Sbjct: 530 ------------------------------TTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Query: 493 DIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTA-CVNSGLVDKGKEI 551
I+ +N +++ + HG +L N M + P+ TF L+ C+ + L I
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL-KAATAI 618
Query: 552 FKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEA 584
+K+M G P + + +V +A + EA
Sbjct: 619 YKDMCS-RGVGPDGKTYENLVKGHCKARNMKEA 650
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/420 (20%), Positives = 164/420 (39%), Gaps = 51/420 (12%)
Query: 261 VNTALLSMYVKLGSLKDARLMFEKMPRNDLVV----WNIMVSAYAGNGCPKESLELVYC- 315
V + V G L++AR +FEKM LV+ N+ ++ + + C K + ++
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKD-CYKTATAIIVFR 235
Query: 316 -MVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACN 374
GV ++ + I + QL + + + G V ++ +++ Y
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 375 GLNSARRIFDLITDKTVVS----WSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVI 430
L+ ++ +++ K + + ++I + EA F EM G D ++
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 431 NILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDE--GK 488
++ F K G + T++++ + + G + A KLF E K
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 489 SSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKG 548
D + + +I+ Y K G F ++N M + P+ VT+ L+ G +D
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 549 KEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKII---ETVPLNSDARVYGPLLS 605
E+ EM + G QP+ + +V+ L ++G I+EA K++ E LN+D Y L+
Sbjct: 476 NELLHEMWKI-GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 606 ACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKT 665
A Y +G+ DK ++ + +GL+ T
Sbjct: 535 A----------------------------------YCKSGEMDKAQEILKEMLGKGLQPT 560
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/466 (17%), Positives = 188/466 (40%), Gaps = 45/466 (9%)
Query: 87 NPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRS-----CFSVSHE 141
PD + YS ++ +FGE +K L + M K + P+ S++ S C
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN----SYIYGSIIGLLCRICKLA 333
Query: 142 QGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEP----LEGMSVT-ELAYWNNMI 196
+ + +++++ G+ +V +L++ + K G + A + +T ++ + +I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 197 SQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLC 256
S + G M E +LF M + ++P+S+T L+ +K +H+ +I +
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 257 GELTVNTALLSMYVKLGSLKDARLMFEKMPR----NDLVVWNIMVSAYAGNGCPKESLEL 312
+ T L+ K G L A + +M + ++ +N +V+ +G +E+++L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 313 VYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSA 372
V +G+ D T + + + + +++ ++ G + N L++ +
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 373 CNGLNSARRIFDLITDKTV----VSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFII 428
L ++ + + K + ++++++K + + + A +++ +M G D
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 429 VINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFD--- 485
N++ K + +L + L+ + K AR++FD
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Query: 486 -EGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQV 530
EG ++ K+I F+ ++ K +PD +
Sbjct: 694 REGLAADKEI-------------------FDFFSDTKYKGKRPDTI 720
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 151/347 (43%), Gaps = 15/347 (4%)
Query: 254 NLCGELTVNTALLSMYVKLGSLKDAR----LMFEKMPRNDLVVWNIMVSAYAGNGCPKES 309
+C + ++ +LG +K+A LM K D++ ++ +V+ Y G +
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 310 LELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDM 369
+L+ M R G++P+ + I + ++ ++ + +IR G V+ LID
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 370 YSACNGLNSARRIF------DLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTR 423
+ + +A + F D+ D V++++A+I +EA LF EM G
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPD--VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 424 VDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKL 483
D + ++ + K G + +H + T+L+ K G ++ A +L
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 484 FDE--GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVN 541
E +I +NS+++ K G + +L + + + + D VT+ L+ A
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Query: 542 SGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKII 588
SG +DK +EI KEM+ G QP+ +++ G +++ K++
Sbjct: 539 SGEMDKAQEILKEMLG-KGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/393 (19%), Positives = 160/393 (40%), Gaps = 48/393 (12%)
Query: 203 GKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN 262
G++++ ++L M+++ ++PNS +++ + L + S +I + + V
Sbjct: 295 GELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVY 354
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRNDL----VVWNIMVSAYAGNGCPKESLELVYCMVR 318
T L+ + K G ++ A F +M D+ + + ++S + G E+ +L + M
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 319 SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNS 378
G+ PD T I+ + H + ++H H+I+ G V + LID L+S
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 379 ARRI----FDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILP 434
A + + + + ++++++ EA+ L E + G D +
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY----- 529
Query: 435 TFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDE--GKSSHK 492
T+L+ +Y K G ++ A+++ E GK
Sbjct: 530 ------------------------------TTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Query: 493 DIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTA-CVNSGLVDKGKEI 551
I+ +N +++ + HG +L N M + P+ TF L+ C+ + L I
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL-KAATAI 618
Query: 552 FKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEA 584
+K+M G P + + +V +A + EA
Sbjct: 619 YKDMCS-RGVGPDGKTYENLVKGHCKARNMKEA 650
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/420 (20%), Positives = 164/420 (39%), Gaps = 51/420 (12%)
Query: 261 VNTALLSMYVKLGSLKDARLMFEKMPRNDLVV----WNIMVSAYAGNGCPKESLELVYC- 315
V + V G L++AR +FEKM LV+ N+ ++ + + C K + ++
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKD-CYKTATAIIVFR 235
Query: 316 -MVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACN 374
GV ++ + I + QL + + + G V ++ +++ Y
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 375 GLNSARRIFDLITDKTVVS----WSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVI 430
L+ ++ +++ K + + ++I + EA F EM G D ++
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 431 NILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDE--GK 488
++ F K G + T++++ + + G + A KLF E K
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 489 SSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKG 548
D + + +I+ Y K G F ++N M + P+ VT+ L+ G +D
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 549 KEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKII---ETVPLNSDARVYGPLLS 605
E+ EM + G QP+ + +V+ L ++G I+EA K++ E LN+D Y L+
Sbjct: 476 NELLHEMWKI-GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 606 ACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKT 665
A Y +G+ DK ++ + +GL+ T
Sbjct: 535 A----------------------------------YCKSGEMDKAQEILKEMLGKGLQPT 560
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/466 (17%), Positives = 188/466 (40%), Gaps = 45/466 (9%)
Query: 87 NPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRS-----CFSVSHE 141
PD + YS ++ +FGE +K L + M K + P+ S++ S C
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN----SYIYGSIIGLLCRICKLA 333
Query: 142 QGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEP----LEGMSVT-ELAYWNNMI 196
+ + +++++ G+ +V +L++ + K G + A + +T ++ + +I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 197 SQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLC 256
S + G M E +LF M + ++P+S+T L+ +K +H+ +I +
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 257 GELTVNTALLSMYVKLGSLKDARLMFEKMPR----NDLVVWNIMVSAYAGNGCPKESLEL 312
+ T L+ K G L A + +M + ++ +N +V+ +G +E+++L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 313 VYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSA 372
V +G+ D T + + + + +++ ++ G + N L++ +
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 373 CNGLNSARRIFDLITDKTV----VSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFII 428
L ++ + + K + ++++++K + + + A +++ +M G D
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 429 VINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFD--- 485
N++ K + +L + L+ + K AR++FD
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Query: 486 -EGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQV 530
EG ++ K+I F+ ++ K +PD +
Sbjct: 694 REGLAADKEI-------------------FDFFSDTKYKGKRPDTI 720
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/431 (20%), Positives = 180/431 (41%), Gaps = 47/431 (10%)
Query: 189 LAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLR-------STVDLHLLK 241
L N +++ +GK+ + L RM + QPN +T +L+ + + + LL+
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236
Query: 242 IGQ-------ALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMP----RNDL 290
+ A+ II+ LC K GSL +A +F +M + D+
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLC--------------KDGSLDNAFNLFNEMEIKGFKADI 282
Query: 291 VVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAH 350
+++ ++ + G + +L+ M++ + PD+ I + +++H
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 351 VIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDK----TVVSWSAMIKAHAVHDQ 406
+I+ G + +LID + N L+ A + DL+ K + +++ +I + +
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 407 CLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETS 466
+ L LF +M L G D + ++ F ++G L + L
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 467 LLASYAKCGCIEMARKLFDEGKSSHK--DIIAWNSMISAYSKHGEWFQCFELYNQMKLSN 524
LL G E A ++F++ + S DI +N +I + ++L+ + L
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 525 VKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRA----GQ 580
VKPD T+ ++ G + + +F++M + G+ P + C ++L RA G
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE-DGHSP----NGCTYNILIRAHLGEGD 577
Query: 581 IDEASKIIETV 591
+++K+IE +
Sbjct: 578 ATKSAKLIEEI 588
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/396 (19%), Positives = 159/396 (40%), Gaps = 20/396 (5%)
Query: 49 RFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENP----DSVIYSAILRNLSQFG 104
R G N ++ K G L+ ++ E D+V YS I+ L + G
Sbjct: 202 RMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 105 EHEKTLFLYKEMVEKSMYPDEESCSFVLRS-CFSVSHEQGKMVHAQIVKLGMDAFDLVRN 163
+ L+ EM K D + ++R C++ + G + ++K + + +
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Query: 164 SLVELYEKNGFLNAHEPL------EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRK 217
+L++ + K G L E L G+S + Y ++I + ++++ + M
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY-TSLIDGFCKENQLDKANHMLDLMVS 380
Query: 218 ENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKD 277
+ PN T L+ +L+ G L + + + + L+ + +LG L+
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440
Query: 278 ARLMFEKMP----RNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAIS 333
A+ +F++M R D+V + I++ NG P+++LE+ + +S + D+ I
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500
Query: 334 SITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDK---- 389
+ + + + G V +N +I L+ A +F + +
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560
Query: 390 TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVD 425
+++ +I+AH ++ L E+K CG VD
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/378 (19%), Positives = 152/378 (40%), Gaps = 21/378 (5%)
Query: 231 LRSTVDLHLLKIGQALHSLII---------VSNLCGELTVNTALLSMYVKLGSLKDARLM 281
+R + LL+ G +L + VS+ G+++ L S V + DA +
Sbjct: 1 MRGLIQTRLLETGTLRTALFLSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKE-DDAVDL 59
Query: 282 FEKM----PRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQ 337
F++M PR L+ ++ + S A L+L M G+ +++T I+ +
Sbjct: 60 FQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCR 119
Query: 338 LKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITD----KTVVS 393
+ +I+ G + + LI+ ++ A + D + + T+++
Sbjct: 120 CRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLIT 179
Query: 394 WSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXX 453
+A++ ++ + +A+ L M G + + + +L K G L
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 454 XXXXXXXXXXETSLLASYAKCGCIEMARKLFDEG--KSSHKDIIAWNSMISAYSKHGEWF 511
+ ++ K G ++ A LF+E K DII + ++I + G W
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299
Query: 512 QCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACM 571
+L M + PD V F L+ V G + + +E+ KEM+ G P + +
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ-RGISPDTVTYTSL 358
Query: 572 VDLLGRAGQIDEASKIIE 589
+D + Q+D+A+ +++
Sbjct: 359 IDGFCKENQLDKANHMLD 376
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 119/288 (41%), Gaps = 47/288 (16%)
Query: 87 NPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMV 146
PD V +SA++ + G+ + L+KEM+++ + PD + + ++ F ++ K
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG-FCKENQLDKAN 372
Query: 147 HAQIVKLGMDAFDLVR--NSLVELYEKNGFLN-AHEPLEGMS----VTELAYWNNMISQA 199
H + + +R N L+ Y K ++ E MS V + +N +I
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 200 FESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVD-------LHLL-KIGQALHSL-- 249
E GK+E +LF M ++P+ ++ LL D L + KI ++ L
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492
Query: 250 ----IIVSNLCGELTVNTA---------------------LLSMYVKLGSLKDARLMFEK 284
II+ +C V+ A ++ K GSL +A L+F K
Sbjct: 493 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552
Query: 285 MPRN----DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTA 328
M + + +NI++ A+ G G +S +L+ + R G D T
Sbjct: 553 MEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTV 600
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 126/280 (45%), Gaps = 19/280 (6%)
Query: 424 VDFIIVINILPTFAKI----GALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEM 479
+++++ ++ L AKI L + +HG LL Y+ CG
Sbjct: 248 MNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANE 307
Query: 480 ARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTAC 539
A +F+ K S K++ W +I ++K+G +++++ K PD F G+ AC
Sbjct: 308 AASVFE--KMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYAC 365
Query: 540 VNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARV 599
G VD+G F+ M YG PS E + +V++ G +DEA + +E +P+ + V
Sbjct: 366 GMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDV 425
Query: 600 YGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVA-KMRSFLR 658
+ L++ ++H + L + A+ + ++P I A +K + K RS +
Sbjct: 426 WETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFIPVKASDVEKESLKKRSGIL 485
Query: 659 DRGLKKTPGCSWLESNGQVHEFRVADQSHPRSVDIYSILK 698
G+K + + EFR D + P + +++ +L+
Sbjct: 486 -HGVKSS-----------MQEFRAGDTNLPENDELFQLLR 513
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 197/497 (39%), Gaps = 53/497 (10%)
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMV 146
P+ V ++ ++ L G +++ ++MVE+ M P + S +++ V
Sbjct: 293 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFV 352
Query: 147 HAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLE------GMSVTELAYWNNMISQAF 200
++ K G +V N+L++ + + G LN ++ G+S+T Y N +I
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTY-NTLIKGYC 411
Query: 201 ESGKMEECFQLFSRMRKE--NIQPNSIT-VINLLRSTV--DLHLLKIGQALHS------- 248
++G+ + +L M N+ S T VI LL S + D L +G+ L
Sbjct: 412 KNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 471
Query: 249 --LIIVSNLCG---------------------ELTVNTALLSMYVKLGSLKDA-RLMFEK 284
++S LC + + ALL + G L +A R+ E
Sbjct: 472 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531
Query: 285 MPRN---DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHT 341
+ R D V +N ++S G E+ + MV+ G++PD +T I + +
Sbjct: 532 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591
Query: 342 EWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTV----VSWSAM 397
E Q RNG V ++ +ID + FD + K V V ++ +
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 398 IKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXX 457
I+A+ + AL L +MK G + +++ + I + + L
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 458 XXXXXXETSLLASYAKCGCIEMARKLFDE--GKSSHKDIIAWNSMISAYSKHGEWFQCFE 515
T+L+ Y K G + L E K+ H + I + MI Y++ G +
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 516 LYNQMKLSNVKPDQVTF 532
L N+M+ + PD +T+
Sbjct: 772 LLNEMREKGIVPDSITY 788
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 169/419 (40%), Gaps = 25/419 (5%)
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPKESLELVYCMVR 318
T ++ + K G +++A +F KM ++V +N ++ G E+ MV
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 323
Query: 319 SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNS 378
G+ P + T + +T+ K + + + G V V+N LID + LN
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 379 ARRIFDLITDK----TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVD---FIIVIN 431
A I DL+ K T +++ +IK + + Q A L EM G V+ F VI
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 432 ILPTFAKI-GALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDE--GK 488
+L + AL +V G T+L++ K G A +L+ + K
Sbjct: 444 LLCSHLMFDSALRFV----GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 499
Query: 489 SSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKG 548
D N+++ + G+ + F + ++ D+V++ L++ C +D+
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 549 KEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNS---DARVYGPLLS 605
EMV G +P ++ ++ L +++EA + + N D Y ++
Sbjct: 560 FMFLDEMVK-RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Query: 606 ACKMHSDPRLAEVAAQKLI--NMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGL 662
C + +++ N++P N Y L Y +G+ ++R ++ +G+
Sbjct: 619 GCCKAERTEEGQEFFDEMMSKNVQP-NTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 121/639 (18%), Positives = 228/639 (35%), Gaps = 98/639 (15%)
Query: 110 LFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELY 169
L ++ + K M+P + +C+ +L S + Q +V G+ + + + +
Sbjct: 211 LDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAF 270
Query: 170 EKNGFLNAHEPL-----EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNS 224
K G + L E + +N +I G+ +E F +M + ++P
Sbjct: 271 CKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTL 330
Query: 225 ITVINLLRSTVDLHLLKIGQALHSL--IIVSNLCGELTVNTALLSMYVKLGSLKDA---- 278
IT L++ +IG A L + + V L+ +++ GSL A
Sbjct: 331 ITYSILVKGLTRAK--RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 279 RLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG--VRPDMFTAI------- 329
LM K +N ++ Y NG + L+ M+ G V FT++
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 330 -------------------PAISSITQL-----KHTEWGKQMHA--HVIRNGSDYQVSVH 363
P +T L KH + K + + G
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 364 NALIDMYSACNGLNSARRIFDLITDKTVV----SWSAMIKAHAVHDQCLEALSLFIEMKL 419
NAL+ L+ A RI I + V S++ +I + EA EM
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 420 CGTRVD-FIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIE 478
G + D + I I F +++ ++ K E
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV-MIDGCCKAERTE 627
Query: 479 MARKLFDE--GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLL 536
++ FDE K+ + + +N +I AY + G EL MK + P+ T+ L+
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 537 TACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSD 596
V++ K +F+EM + G +P+ H+ ++D G+ GQ+ + ++
Sbjct: 688 KGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR------- 739
Query: 597 ARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSF 656
+MHS N+ P N Y ++ YA G + +++ +
Sbjct: 740 -----------EMHSK------------NVHP-NKITYTVMIGGYARDGNVTEASRLLNE 775
Query: 657 LRDRGLKKTPGC--------SWLESNGQVHEFRVADQSH 687
+R++G+ P +L+ G + F+ +D+ +
Sbjct: 776 MREKGI--VPDSITYKEFIYGYLKQGGVLEAFKGSDEEN 812
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/365 (19%), Positives = 140/365 (38%), Gaps = 39/365 (10%)
Query: 87 NPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRS-CFSVSHEQGKM 145
+P + + ++ L + G+H K L L+ + + K D + + +L C E GK+
Sbjct: 467 SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC-----EAGKL 521
Query: 146 VHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTELAYWNNMISQAFESGKM 205
A F E L V + +N +IS K+
Sbjct: 522 DEA-------------------------FRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 206 EECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTAL 265
+E F M K ++P++ T L+ +++ ++ + + ++ + +
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 266 LSMYVKLGSLKDARLMFEKMPRNDL----VVWNIMVSAYAGNGCPKESLELVYCMVRSGV 321
+ K ++ + F++M ++ VV+N ++ AY +G +LEL M G+
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 322 RPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARR 381
P+ T I ++ + E K + + G + V + ALID Y +
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 736
Query: 382 IFDLITDKTV----VSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFA 437
+ + K V ++++ MI +A EA L EM+ G D I + +
Sbjct: 737 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYL 796
Query: 438 KIGAL 442
K G +
Sbjct: 797 KQGGV 801
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 197/497 (39%), Gaps = 53/497 (10%)
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMV 146
P+ V ++ ++ L G +++ ++MVE+ M P + S +++ V
Sbjct: 293 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFV 352
Query: 147 HAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLE------GMSVTELAYWNNMISQAF 200
++ K G +V N+L++ + + G LN ++ G+S+T Y N +I
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTY-NTLIKGYC 411
Query: 201 ESGKMEECFQLFSRMRKE--NIQPNSIT-VINLLRSTV--DLHLLKIGQALHS------- 248
++G+ + +L M N+ S T VI LL S + D L +G+ L
Sbjct: 412 KNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 471
Query: 249 --LIIVSNLCG---------------------ELTVNTALLSMYVKLGSLKDA-RLMFEK 284
++S LC + + ALL + G L +A R+ E
Sbjct: 472 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531
Query: 285 MPRN---DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHT 341
+ R D V +N ++S G E+ + MV+ G++PD +T I + +
Sbjct: 532 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591
Query: 342 EWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTV----VSWSAM 397
E Q RNG V ++ +ID + FD + K V V ++ +
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 398 IKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXX 457
I+A+ + AL L +MK G + +++ + I + + L
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 458 XXXXXXETSLLASYAKCGCIEMARKLFDE--GKSSHKDIIAWNSMISAYSKHGEWFQCFE 515
T+L+ Y K G + L E K+ H + I + MI Y++ G +
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 516 LYNQMKLSNVKPDQVTF 532
L N+M+ + PD +T+
Sbjct: 772 LLNEMREKGIVPDSITY 788
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 169/419 (40%), Gaps = 25/419 (5%)
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPKESLELVYCMVR 318
T ++ + K G +++A +F KM ++V +N ++ G E+ MV
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 323
Query: 319 SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNS 378
G+ P + T + +T+ K + + + G V V+N LID + LN
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 379 ARRIFDLITDK----TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVD---FIIVIN 431
A I DL+ K T +++ +IK + + Q A L EM G V+ F VI
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 432 ILPTFAKI-GALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDE--GK 488
+L + AL +V G T+L++ K G A +L+ + K
Sbjct: 444 LLCSHLMFDSALRFV----GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 499
Query: 489 SSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKG 548
D N+++ + G+ + F + ++ D+V++ L++ C +D+
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 549 KEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNS---DARVYGPLLS 605
EMV G +P ++ ++ L +++EA + + N D Y ++
Sbjct: 560 FMFLDEMVK-RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Query: 606 ACKMHSDPRLAEVAAQKLI--NMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGL 662
C + +++ N++P N Y L Y +G+ ++R ++ +G+
Sbjct: 619 GCCKAERTEEGQEFFDEMMSKNVQP-NTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 121/639 (18%), Positives = 228/639 (35%), Gaps = 98/639 (15%)
Query: 110 LFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELY 169
L ++ + K M+P + +C+ +L S + Q +V G+ + + + +
Sbjct: 211 LDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAF 270
Query: 170 EKNGFLNAHEPL-----EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNS 224
K G + L E + +N +I G+ +E F +M + ++P
Sbjct: 271 CKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTL 330
Query: 225 ITVINLLRSTVDLHLLKIGQALHSL--IIVSNLCGELTVNTALLSMYVKLGSLKDA---- 278
IT L++ +IG A L + + V L+ +++ GSL A
Sbjct: 331 ITYSILVKGLTRAK--RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 279 RLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSG--VRPDMFTAI------- 329
LM K +N ++ Y NG + L+ M+ G V FT++
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 330 -------------------PAISSITQL-----KHTEWGKQMHA--HVIRNGSDYQVSVH 363
P +T L KH + K + + G
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 364 NALIDMYSACNGLNSARRIFDLITDKTVV----SWSAMIKAHAVHDQCLEALSLFIEMKL 419
NAL+ L+ A RI I + V S++ +I + EA EM
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 420 CGTRVD-FIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIE 478
G + D + I I F +++ ++ K E
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV-MIDGCCKAERTE 627
Query: 479 MARKLFDE--GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLL 536
++ FDE K+ + + +N +I AY + G EL MK + P+ T+ L+
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 537 TACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSD 596
V++ K +F+EM + G +P+ H+ ++D G+ GQ+ + ++
Sbjct: 688 KGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR------- 739
Query: 597 ARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSF 656
+MHS N+ P N Y ++ YA G + +++ +
Sbjct: 740 -----------EMHSK------------NVHP-NKITYTVMIGGYARDGNVTEASRLLNE 775
Query: 657 LRDRGLKKTPGC--------SWLESNGQVHEFRVADQSH 687
+R++G+ P +L+ G + F+ +D+ +
Sbjct: 776 MREKGI--VPDSITYKEFIYGYLKQGGVLEAFKGSDEEN 812
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/365 (19%), Positives = 140/365 (38%), Gaps = 39/365 (10%)
Query: 87 NPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRS-CFSVSHEQGKM 145
+P + + ++ L + G+H K L L+ + + K D + + +L C E GK+
Sbjct: 467 SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC-----EAGKL 521
Query: 146 VHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTELAYWNNMISQAFESGKM 205
A F E L V + +N +IS K+
Sbjct: 522 DEA-------------------------FRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 206 EECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTAL 265
+E F M K ++P++ T L+ +++ ++ + + ++ + +
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 266 LSMYVKLGSLKDARLMFEKMPRNDL----VVWNIMVSAYAGNGCPKESLELVYCMVRSGV 321
+ K ++ + F++M ++ VV+N ++ AY +G +LEL M G+
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 322 RPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARR 381
P+ T I ++ + E K + + G + V + ALID Y +
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 736
Query: 382 IFDLITDKTV----VSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFA 437
+ + K V ++++ MI +A EA L EM+ G D I + +
Sbjct: 737 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYL 796
Query: 438 KIGAL 442
K G +
Sbjct: 797 KQGGV 801
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 107/572 (18%), Positives = 227/572 (39%), Gaps = 41/572 (7%)
Query: 66 MDCYTKFGLPGLSQKVFYFTE----NPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSM 121
+D + K G ++ K F+ E PD V Y++++ L + ++ + +++ + +
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304
Query: 122 YPDEESCSFVLRSCFSVSHEQGK------MVHAQIVKLGMD---AFDLVRNSLVELYEKN 172
P C++ + GK ++ Q K + A++ + L ++ + +
Sbjct: 305 VP----CTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD 360
Query: 173 GFLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLR 232
L E ++ + L+ +N +I +GK++ F+L M+K + PN TV ++
Sbjct: 361 EALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Query: 233 STVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKM----PRN 288
L A+ + + +L+ K+G + DA ++EKM R
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 289 DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMH 348
+ +V+ ++ + +G ++ ++ M+ PD+ + + + E G+ M
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 349 AHV-----IRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVV----SWSAMIK 399
+ + + Y + +H + ++ N +F + ++ V +++ +I
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFA-----NETYELFYSMKEQGCVLDTRAYNIVID 595
Query: 400 AHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXX 459
+ +A L EMK G + +++ AKI L L
Sbjct: 596 GFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 655
Query: 460 XXXXETSLLASYAKCGCIEMARKLFDE--GKSSHKDIIAWNSMISAYSKHGEWFQCFELY 517
+SL+ + K G I+ A + +E K ++ WNS++ A K E + +
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCF 715
Query: 518 NQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGR 577
MK P+QVT+ L+ +K ++EM G +PS + M+ L +
Sbjct: 716 QSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM-QKQGMKPSTISYTTMISGLAK 774
Query: 578 AGQIDEASKIIETVPLNS---DARVYGPLLSA 606
AG I EA + + N D+ Y ++
Sbjct: 775 AGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 99/206 (48%), Gaps = 12/206 (5%)
Query: 465 TSLLASYAKCGCIEMARKLFDEGKSS--HKDIIAWNSMISAYSKHGEWFQCFELYNQMKL 522
T+L+ +AK G ++ A L DE KSS DI+ +N I ++ K G+ ++ +++++
Sbjct: 207 TTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEA 266
Query: 523 SNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQID 582
+ +KPD+VT+ ++ + +D+ E+F E ++ P + M+ G AG+ D
Sbjct: 267 NGLKPDEVTYTSMIGVLCKANRLDEAVEMF-EHLEKNRRVPCTYAYNTMIMGYGSAGKFD 325
Query: 583 EASKIIE------TVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVL 636
EA ++E ++P Y +L+ + A +++ N Y +
Sbjct: 326 EAYSLLERQRAKGSIP---SVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNI 382
Query: 637 LSNIYAAAGKWDKVAKMRSFLRDRGL 662
L ++ AGK D ++R ++ GL
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGL 408
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/431 (19%), Positives = 178/431 (41%), Gaps = 31/431 (7%)
Query: 195 MISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLH----LLKIGQALHSLI 250
M+ ++ K+ E + + MRK +P L+ + ++ +L + Q + L
Sbjct: 139 MVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG 198
Query: 251 IVSNLCGELTVN--TALLSMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNG 304
E TV+ T L+ + K G + A + ++M + D+V++N+ + ++ G
Sbjct: 199 Y------EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVG 252
Query: 305 CPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHN 364
+ + + + +G++PD T I + + + +M H+ +N +N
Sbjct: 253 KVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYN 312
Query: 365 ALIDMYSACNGLNSARRIFDLITDK----TVVSWSAMIKAHAVHDQCLEALSLFIEMK-- 418
+I Y + + A + + K +V++++ ++ + EAL +F EMK
Sbjct: 313 TMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD 372
Query: 419 LCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIE 478
+ I+I++L + G L L ++ K ++
Sbjct: 373 AAPNLSTYNILIDML---CRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429
Query: 479 MARKLFDEG--KSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLL 536
A +F+E K D I + S+I K G +++Y +M S+ + + + + L+
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLI 489
Query: 537 TACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNS- 595
N G + G +I+K+M++ P + +D + +AG+ ++ + E +
Sbjct: 490 KNFFNHGRKEDGHKIYKDMIN-QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 596 --DARVYGPLL 604
DAR Y L+
Sbjct: 549 VPDARSYSILI 559
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/396 (19%), Positives = 163/396 (41%), Gaps = 26/396 (6%)
Query: 65 LMDCYTKFGLPGLSQKVFYFTENPD----SVIYSAILRNLSQFGEHEKTLFLYKEMVEKS 120
L+D K G + KV+ + D S++Y+++++N G E +YK+M+ ++
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Query: 121 MYPDEESCSFVLRSCFSVSH-EQGKMVHAQIV--KLGMDA--FDLVRNSLVELYEKNGFL 175
PD + + + F E+G+ + +I + DA + ++ + L+ K GF
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI----KAGFA 568
Query: 176 NAHEPL-----EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINL 230
N L E V + +N +I + GK+ + +QL M+ + +P +T ++
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 231 LRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRN-- 288
+ + L L + + + ++L+ + K+G + +A L+ E++ +
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Query: 289 --DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQ 346
+L WN ++ A E+L M P+ T I+ + +++
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFV 748
Query: 347 MHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVS----WSAMIKAHA 402
+ + G + +I + + A +FD V ++AMI+ +
Sbjct: 749 FWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808
Query: 403 VHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAK 438
++ ++A SLF E + G + + +L T K
Sbjct: 809 NGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHK 844
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 110/525 (20%), Positives = 221/525 (42%), Gaps = 65/525 (12%)
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMVH 147
P+ IY+ ++ L + G +K L ++ EM + V RS FS +
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQG----------VSRSVFSYT-------- 180
Query: 148 AQIVKLGMDAFDLVRNSLVELYEKNG-FLNAHEPLEGMSVTELA----YWNNMISQAFES 202
+L+ Y +NG + + E L+ M +++ +N +I+
Sbjct: 181 ----------------ALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARG 224
Query: 203 G-KMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTV 261
G E LF+ MR E IQP+ +T LL + L + + + + +LT
Sbjct: 225 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT 284
Query: 262 NTALLSMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPKESLELVYCMV 317
+ L+ + KL L+ + +M D+ +N+++ AYA +G KE++ + + M
Sbjct: 285 YSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 318 RSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLN 377
+G P+ T ++ Q + +Q+ + + +D + +N LI+++
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 378 SARRIFDLITDKTVV----SWSAMIKA---HAVHDQCLEALSLFIEMKLCGTRVDFIIVI 430
+F + ++ + ++ +I A +H+ + L + + + VI
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVI 464
Query: 431 NILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXET--SLLASYAKCGCIEMAR----KLF 484
F + A Y L + ET SLL S+A+ G ++ + +L
Sbjct: 465 E---AFGQ--AALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLV 519
Query: 485 DEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGL 544
D G ++D +N+ I AY + G++ + + Y M+ S PD+ T +L+ + L
Sbjct: 520 DSGIPRNRD--TFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARL 577
Query: 545 VDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIE 589
VD+ +E F+EM PS + M+ + G+ + D+ ++++E
Sbjct: 578 VDECREQFEEM-KASDILPSIMCYCMMLAVYGKTERWDDVNELLE 621
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 177/413 (42%), Gaps = 28/413 (6%)
Query: 261 VNTALLSMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPKESLELVYCM 316
+ T ++S+ + G L +F++MP + + +++AY NG + SLEL+ M
Sbjct: 143 IYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRM 202
Query: 317 VRSGVRPDMFTAIPAISSITQLKHTEWGK--QMHAHVIRNGSDYQVSVHNALIDMYSAC- 373
+ P + T I++ + +W + A + G + +N L+ SAC
Sbjct: 203 KNEKISPSILTYNTVINACAR-GGLDWEGLLGLFAEMRHEGIQPDIVTYNTLL---SACA 258
Query: 374 -NGL-NSARRIFDLITDKTVV----SWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFI 427
GL + A +F + D +V ++S +++ + + L EM G+ D
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDIT 318
Query: 428 IVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEG 487
+L +AK G++ + + LL + + G + R+LF E
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 488 KSSHKDIIA--WNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLV 545
KSS+ D A +N +I + + G + + L++ M N++PD T+ G++ AC GL
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLH 438
Query: 546 DKGKEIFKEMV--DLYGYQPSQEHHACMVDLLGRAGQIDEASKIIET---VPLNSDARVY 600
+ ++I + M D+ PS + + +++ G+A +EA T V N +
Sbjct: 439 EDARKILQYMTANDIV---PSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETF 495
Query: 601 GPLLSACKMHSDPRLAEVAAQKLINME-PKNAGNYVLLSNIYAAAGKWDKVAK 652
LL + + +E +L++ P+N + Y GK+++ K
Sbjct: 496 HSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVK 548
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 147/352 (41%), Gaps = 15/352 (4%)
Query: 269 YVKLGSLKDARLMFEKMPRND-----LVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRP 323
+ K G ++DA ++M D +N +V+ G K ++E++ M++ G P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 324 DMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIF 383
D++T IS + +L + ++ +I +N LI N + A +
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 384 DLITDK----TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKI 439
++T K V +++++I+ + A+ LF EM+ G D ++ +
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 440 GALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGK--SSHKDIIAW 497
G L + +L+ + K A ++FDE + ++ + +
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 498 NSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVD 557
N++I K +L +QM + KPD+ T+ LLT G + K +I + M
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 558 LYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPL---NSDARVYGPLLSA 606
G +P + ++ L +AG+++ ASK++ ++ + N Y P++
Sbjct: 569 -NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQG 619
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/479 (18%), Positives = 195/479 (40%), Gaps = 28/479 (5%)
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKM-V 146
PD ++ +++ L + + + + ++M + PDE++ + V++ G + +
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 147 HAQIVKLGMDAFDLVRNSLVELYEKNGFL-NAHEPLEGMSVTELAY-----WNNMISQAF 200
Q+V+ G ++ N +V + K G + +A ++ MS + + +N +++
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 201 ESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNL----C 256
++G ++ ++ M +E P+ T +++ L K+G+ ++ ++ + C
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG-----LCKLGEVKEAVEVLDQMITRDC 361
Query: 257 GELTVN-TALLSMYVKLGSLKDA----RLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLE 311
TV L+S K +++A R++ K D+ +N ++ + ++E
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421
Query: 312 LVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYS 371
L M G PD FT I S+ + M + +G V +N LID +
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481
Query: 372 ACNGLNSARRIFDLI----TDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFI 427
N A IFD + + V+++ +I + +A L +M + G + D
Sbjct: 482 KANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKY 541
Query: 428 IVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEG 487
++L F + G + + +L++ K G +E+A KL
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Query: 488 KSSHKDII--AWNSMISAYSKHGEWFQCFELYNQMKLSN-VKPDQVTFLGLLTACVNSG 543
+ ++ A+N +I + + + L+ +M N PD V++ + N G
Sbjct: 602 QMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 117/591 (19%), Positives = 227/591 (38%), Gaps = 94/591 (15%)
Query: 163 NSLVELYEKNGFLNA-----HEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRK 217
N+L++LY K G LN E L+ + +N MI G + E L +M +
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEE 368
Query: 218 ENIQPNSITVINLLRSTVDL-----------HLLKIG----QALHSLII----------- 251
+ I P++ T LL D + K+G H ++
Sbjct: 369 KGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAE 428
Query: 252 VSNLCGELTVNT---------ALLSMYVKLGSLKDARLMFEKMP---------------- 286
V + E+ N+ ++ MYV G + A+ +FE+
Sbjct: 429 VEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDV 488
Query: 287 -----------------------RNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRP 323
RND++ +N+M+ AY +++L L M G P
Sbjct: 489 YAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWP 548
Query: 324 DMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIF 383
D T + + + +++ A ++ +G + A+I Y L+ A ++
Sbjct: 549 DECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLY 608
Query: 384 DLITDKTV----VSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKI 439
+ + V V + ++I A EA+ F M+ G + + I++ +++ ++K+
Sbjct: 609 EAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKV 668
Query: 440 GALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHK-DIIAWN 498
G L R ++ S+L+ A G + A +F+ + D+I++
Sbjct: 669 GCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFA 728
Query: 499 SMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDL 558
+M+ Y G + E+ +M+ S + D +F ++ G + + E+F EM+
Sbjct: 729 TMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVE 788
Query: 559 YGYQPSQEHHACMVDLLGRAGQIDEASKIIETV-----PLNSDARVYGPLLSACKMHSDP 613
+ LL + G EA ++T PL + A + L SA +++
Sbjct: 789 RKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPA-ITATLFSAMGLYA-- 845
Query: 614 RLAEVAAQKLINME-PKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLK 663
A + Q+L + E P+ Y + Y+A+G D K ++++GL+
Sbjct: 846 -YALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLE 895
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 144/296 (48%), Gaps = 17/296 (5%)
Query: 44 QQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTEN-----PDSVIYSAILR 98
+ + RF L + +++L++ ++D Y + GL ++ VFY N D + Y+ +++
Sbjct: 465 KALFERFQLDCVLSSTTLAA-VIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIK 523
Query: 99 NLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-EQGKMVHAQIVKLGMDA 157
+ HEK L L+K M + +PDE + + + + V ++ + + A+++ G
Sbjct: 524 AYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKP 583
Query: 158 FDLVRNSLVELYEKNGFL----NAHEPLE--GMSVTELAYWNNMISQAFESGKMEECFQL 211
+++ Y + G L + +E +E G+ E+ Y ++I+ ESG +EE Q
Sbjct: 584 GCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVY-GSLINGFAESGMVEEAIQY 642
Query: 212 FSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVK 271
F M + +Q N I + +L+++ + L+ + ++ + S ++ + ++LS+
Sbjct: 643 FRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCAD 702
Query: 272 LGSLKDARLMFEKMPRN---DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPD 324
LG + +A +F + D++ + M+ Y G G E++E+ M SG+ D
Sbjct: 703 LGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSD 758
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 156/403 (38%), Gaps = 58/403 (14%)
Query: 260 TVNTALLSMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPKESLELVYC 315
T NT L+ +Y K G L DA +F +M ++ D V +N M+ +G E+ L+
Sbjct: 307 TFNT-LIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKK 365
Query: 316 MVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNG 375
M G+ PD T +N L+ +++
Sbjct: 366 MEEKGISPDTKT-----------------------------------YNILLSLHADAGD 390
Query: 376 LNSA----RRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVIN 431
+ +A R+I + V+ A++ E ++ EM R+D V
Sbjct: 391 IEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPV 450
Query: 432 ILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGK--- 488
I+ + G + + L +++ YA+ G A +F GK
Sbjct: 451 IMQMYVNEGLVVQAKALFERFQLDCVLSSTTL-AAVIDVYAEKGLWVEAETVF-YGKRNM 508
Query: 489 -SSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDK 547
D++ +N MI AY K + L+ MK PD+ T+ L LVD+
Sbjct: 509 SGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDE 568
Query: 548 GKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKI---IETVPLNSDARVYGPLL 604
+ I EM+D G +P + +A M+ R G + +A + +E + + VYG L+
Sbjct: 569 AQRILAEMLD-SGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLI 627
Query: 605 SACKMHSDPRLAEVAAQKLINMEPKNA-GNYVLLSNIYAAAGK 646
+ ++ + E A Q ME N+++L+++ A K
Sbjct: 628 NG---FAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSK 667
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 111/562 (19%), Positives = 236/562 (41%), Gaps = 45/562 (8%)
Query: 55 LHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTENPDSVIYSAILRNLSQFGEHEKTLFLYK 114
L +N L KL D FG S+ + P V ++ +L +++ + + + L +
Sbjct: 51 LSRNVLLDLKLDDAVDLFGEMVQSRPL------PSIVEFNKLLSAIAKMNKFDLVISLGE 104
Query: 115 EMVEKSMYPDEESCSFVLRSCFSVSHEQ--GKMVHAQIVKLGMDAFDLVRNSLVELYEKN 172
M + D S + +L +CF + V +++KLG + + +SL+ N
Sbjct: 105 RMQNLRISYDLYSYN-ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLL-----N 158
Query: 173 GFLNAHEPLEGMSVTELAY----------WNNMISQAFESGKMEECFQLFSRMRKENIQP 222
G+ + E +++ + + +N +I F K E L RM QP
Sbjct: 159 GYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQP 218
Query: 223 NSIT---VINLL--RSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKD 277
+ T V+N L R +DL L +L + + ++ + T ++ ++ D
Sbjct: 219 DLFTYGTVVNGLCKRGDIDLAL-----SLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 273
Query: 278 ARLMFEKMP----RNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAIS 333
A +F +M R ++V +N ++ G ++ L+ M+ + P++ T I
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
Query: 334 SITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDK---- 389
+ + ++++ +I+ D + +++LI+ + + L+ A+ +F+L+ K
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 390 TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLH 449
VV+++ +IK + E + LF EM G + + ++ + G + +
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 450 GYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSS--HKDIIAWNSMISAYSKH 507
+ LL K G +E A +F+ + S DI +N MI K
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 508 GEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEH 567
G+ ++L+ + L VKP+ + + +++ GL ++ +F+EM + G P+
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE-DGTLPNSGT 572
Query: 568 HACMVDLLGRAGQIDEASKIIE 589
+ ++ R G ++++I+
Sbjct: 573 YNTLIRARLRDGDKAASAELIK 594
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/380 (18%), Positives = 137/380 (36%), Gaps = 37/380 (9%)
Query: 182 EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLK 241
+G ++ + +I + + LF+ M + I+PN +T +L+R +
Sbjct: 248 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 307
Query: 242 IGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYA 301
L S +I + + +AL+ +VK G L +A ++++
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE----------------- 350
Query: 302 GNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVS 361
M++ + PD+FT I+ + K M +I V
Sbjct: 351 --------------MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 362 VHNALIDMYSACNGLNSARRIFDLITDK----TVVSWSAMIKAHAVHDQCLEALSLFIEM 417
+N LI + + +F ++ + V+++ +I+ C A +F +M
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 418 KLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCI 477
G D I +L K G L + Y ++ K G +
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Query: 478 EMARKLFD--EGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGL 535
E LF K ++I + +MIS + + G + L+ +MK P+ T+ L
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 576
Query: 536 LTACVNSGLVDKGKEIFKEM 555
+ A + G E+ KEM
Sbjct: 577 IRARLRDGDKAASAELIKEM 596
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 181/446 (40%), Gaps = 92/446 (20%)
Query: 190 AYWN-NMISQAF-ESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALH 247
++W N+++++ ++G + Q+F M+ + + PN+ + L+ S + L AL
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL- 160
Query: 248 SLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPR----NDLVVWNIMVSAYAGN 303
L+ + G V +LL+ VKL ++DA +F++ R ND +NI++ G
Sbjct: 161 -LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGV 219
Query: 304 GCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVH 363
G +++LEL+ M G PD+ T +
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVT-----------------------------------Y 244
Query: 364 NALIDMYSACNGLNSARRIFDLITDKTV-----VSWSAMIKAHAVHDQCLEALSLFIEMK 418
N LI + N LN A +F + +V V++++MI + + EA SL +M
Sbjct: 245 NTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDML 304
Query: 419 LCG---TRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCG 475
G T V F ++++ +AK G + + G TSL+ Y + G
Sbjct: 305 RLGIYPTNVTFNVLVD---GYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVG 361
Query: 476 CIEMARKLFDE---------------------------------GKSSHKDIIA----WN 498
+ +L++E G+ + KDII +N
Sbjct: 362 QVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYN 421
Query: 499 SMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDL 558
+I + K G+ + + +M+ KPD++TF L+ G + + IF +MV +
Sbjct: 422 PVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAI 481
Query: 559 YGYQPSQEHHACMVDLLGRAGQIDEA 584
G P + + ++ L +AG EA
Sbjct: 482 -GCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/265 (18%), Positives = 119/265 (44%), Gaps = 11/265 (4%)
Query: 84 FTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSM-YPDEES-CSFVLRSCFSVSHE 141
F PD V Y+ +++ + E K ++K++ S+ PD + S + C +
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 142 QGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVT-----ELAYWNNMI 196
+ + +++LG+ ++ N LV+ Y K G + E + G ++ ++ + ++I
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 197 SQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLC 256
G++ + F+L+ M + PN+ T L+ + + + L + L + ++
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 257 GELTVNTALLSMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPKESLEL 312
+ + ++ + K G + +A ++ E+M + D + + I++ + G E++ +
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474
Query: 313 VYCMVRSGVRPDMFTAIPAISSITQ 337
+ MV G PD T +S + +
Sbjct: 475 FHKMVAIGCSPDKITVSSLLSCLLK 499
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 181/446 (40%), Gaps = 92/446 (20%)
Query: 190 AYWN-NMISQAF-ESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALH 247
++W N+++++ ++G + Q+F M+ + + PN+ + L+ S + L AL
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL- 160
Query: 248 SLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPR----NDLVVWNIMVSAYAGN 303
L+ + G V +LL+ VKL ++DA +F++ R ND +NI++ G
Sbjct: 161 -LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGV 219
Query: 304 GCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVH 363
G +++LEL+ M G PD+ T +
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVT-----------------------------------Y 244
Query: 364 NALIDMYSACNGLNSARRIFDLITDKTV-----VSWSAMIKAHAVHDQCLEALSLFIEMK 418
N LI + N LN A +F + +V V++++MI + + EA SL +M
Sbjct: 245 NTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDML 304
Query: 419 LCG---TRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCG 475
G T V F ++++ +AK G + + G TSL+ Y + G
Sbjct: 305 RLGIYPTNVTFNVLVD---GYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVG 361
Query: 476 CIEMARKLFDE---------------------------------GKSSHKDIIA----WN 498
+ +L++E G+ + KDII +N
Sbjct: 362 QVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYN 421
Query: 499 SMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDL 558
+I + K G+ + + +M+ KPD++TF L+ G + + IF +MV +
Sbjct: 422 PVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAI 481
Query: 559 YGYQPSQEHHACMVDLLGRAGQIDEA 584
G P + + ++ L +AG EA
Sbjct: 482 -GCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/265 (18%), Positives = 119/265 (44%), Gaps = 11/265 (4%)
Query: 84 FTENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSM-YPDEES-CSFVLRSCFSVSHE 141
F PD V Y+ +++ + E K ++K++ S+ PD + S + C +
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 142 QGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVT-----ELAYWNNMI 196
+ + +++LG+ ++ N LV+ Y K G + E + G ++ ++ + ++I
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 197 SQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLC 256
G++ + F+L+ M + PN+ T L+ + + + L + L + ++
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 257 GELTVNTALLSMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPKESLEL 312
+ + ++ + K G + +A ++ E+M + D + + I++ + G E++ +
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474
Query: 313 VYCMVRSGVRPDMFTAIPAISSITQ 337
+ MV G PD T +S + +
Sbjct: 475 FHKMVAIGCSPDKITVSSLLSCLLK 499
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 169/418 (40%), Gaps = 43/418 (10%)
Query: 203 GKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN 262
G++E+ +L + I+P + T ++ + V + + ++ +
Sbjct: 238 GEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTY 297
Query: 263 TALLSMYVKLGSLKDARLMFEKMPR----NDLVVWNIMVSAYAGNGCPKESLELVYCMVR 318
T L+ + VK G + DA +F++M +D+ V+ ++S G K + L +
Sbjct: 298 TLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTE 357
Query: 319 SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNS 378
G+ P +T I + ++ + + + G + V N LID Y ++
Sbjct: 358 KGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDE 417
Query: 379 ARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAK 438
A I+D++ K + A + C L + E K + ++ K
Sbjct: 418 ASMIYDVMEQK---GFQADVFTCNTIASCFNRLKRYDEAKQW--------LFRMMEGGVK 466
Query: 439 IGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDE--GKSSHKDIIA 496
+ + Y T+L+ Y K G +E A++LF E K + I
Sbjct: 467 LSTVSY--------------------TNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAIT 506
Query: 497 WNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMV 556
+N MI AY K G+ + +L M+ + + PD T+ L+ + VD+ +F EM
Sbjct: 507 YNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM- 565
Query: 557 DLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNS---DARVYGPLLSACKMHS 611
L G + + M+ L +AG+ DEA + + + D +VY L+ + MHS
Sbjct: 566 GLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS--MHS 621
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/459 (20%), Positives = 175/459 (38%), Gaps = 86/459 (18%)
Query: 94 SAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMVHAQIVKL 153
+ ++ L + GE EK+ L KE K + P+ + + ++ + G +++K
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287
Query: 154 GMDAFDLVRNSLV-ELYEKNGFLNAHEPL-----EGMSVTELAYWNNMISQAFESGKMEE 207
++ V +L+ EL KNG ++ E L E +++ + ++IS G M+
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347
Query: 208 CFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLS 267
F LF + ++ + P+S T AL+
Sbjct: 348 AFLLFDELTEKGLSPSSYTY-----------------------------------GALID 372
Query: 268 MYVKLGSLKDARLMFEKMPRNDL----VVWNIMVSAYAGNGCPKESLELVYCMVRSGVRP 323
K+G + A ++ +M + VV+N ++ Y G E+ + M + G +
Sbjct: 373 GVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQA 432
Query: 324 DMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIF 383
D+FT S +LK + KQ ++ G + LID+Y + A+R+F
Sbjct: 433 DVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLF 492
Query: 384 DLITDKTV----VSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKI 439
++ K V ++++ MI A+ + EA L M+ G D
Sbjct: 493 VEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPD-------------- 538
Query: 440 GALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEG--KSSHKDIIAW 497
+ Y +HG ++ A +LF E K ++ + +
Sbjct: 539 -SYTYTSLIHGECIADN--------------------VDEAMRLFSEMGLKGLDQNSVTY 577
Query: 498 NSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLL 536
MIS SK G+ + F LY++MK D + L+
Sbjct: 578 TVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 122/301 (40%), Gaps = 42/301 (13%)
Query: 409 EALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLL 468
EA+ + ++ G +D I ++ + K AL R +H +++
Sbjct: 102 EAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAII 161
Query: 469 ASYAKCGCIEMARKLFDEGKSSHKDIIAWNS-----MISAYSKHGEWFQCFELYNQMKLS 523
Y+ C ++ A K+F+E + WNS M+ + +G + +L+ + K
Sbjct: 162 EMYSGCCSVDDALKVFEE-------MPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEE 214
Query: 524 NVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDE 583
KP+ F + + C +G V +G F+ M YG PS EH+ + +L +G +DE
Sbjct: 215 GNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDE 274
Query: 584 ASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAA 643
A +E +P+ V+ L++ ++H D L + A+ + ++
Sbjct: 275 ALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD---------------- 318
Query: 644 AGKWDKVAKMRSFLRDRGLKKTPGCSWLESNGQVHE-------FRVADQSHPRSVDIYSI 696
A + DKV+ GL T +++ FR D SHP+ IY
Sbjct: 319 ATRLDKVSSA-------GLVATKASDFVKKEPSTRSEPYFYSTFRPVDSSHPQMNIIYET 371
Query: 697 L 697
L
Sbjct: 372 L 372
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 109/527 (20%), Positives = 211/527 (40%), Gaps = 87/527 (16%)
Query: 81 VFYFTEN---PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFS 137
V + T N P ++ A+ L G E+ + + +M ++P SC+ +L
Sbjct: 180 VLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH---- 235
Query: 138 VSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTELAYWNNMIS 197
+ KLG + V+ + K+ P T Y N MI
Sbjct: 236 -----------RFAKLG-------KTDDVKRFFKDMIGAGARP------TVFTY-NIMID 270
Query: 198 QAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLII---VSN 254
+ G +E LF M+ + P+++T S +D K+G+ ++ + +
Sbjct: 271 CMCKEGDVEAARGLFEEMKFRGLVPDTVTY----NSMID-GFGKVGRLDDTVCFFEEMKD 325
Query: 255 LCGELTVNT--ALLSMYVKLGSLKDARLMFEKMPRNDL----VVWNIMVSAYAGNGCPKE 308
+C E V T AL++ + K G L + +M N L V ++ +V A+ G ++
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 309 SLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALID 368
+++ M R G+ P+ +T I + ++ + ++ +++ G ++ V + ALID
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Query: 369 MYSACNGLNSARRIFDLITDKTVV----SWSAMIKAHAVHDQCLEALSLFIEMKLCGTRV 424
+ A +F + V+ S++A+I AL L E+K G +
Sbjct: 446 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505
Query: 425 DFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLF 484
D ++ Y ++ G L S K IE A+ +
Sbjct: 506 DLLL---------------YGTFIWG-----------------LCSLEK---IEAAKVVM 530
Query: 485 DEGKSS--HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNS 542
+E K + + + +++ AY K G + L ++MK +++ VTF L+ +
Sbjct: 531 NEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKN 590
Query: 543 GLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIE 589
LV K + F + + +G Q + M+D L + Q++ A+ + E
Sbjct: 591 KLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFE 637
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 93/489 (19%), Positives = 195/489 (39%), Gaps = 26/489 (5%)
Query: 19 IVAPFQTRFFTTSSLLDLCTKPQHLQQIHARF---FLHGLHQNSSLSSKLMDCYTKFGLP 75
I A + FT + ++D K ++ F GL ++ + ++D + K G
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG-- 311
Query: 76 GLSQKVFYFTE------NPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCS 129
L V +F E PD + Y+A++ +FG+ L Y+EM + P+ S S
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371
Query: 130 FVLRS-CFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTE 188
++ + C +Q + + ++G+ + SL++ K G L+ L +
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV 431
Query: 189 LAYWNNMISQAFESG-----KMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIG 243
WN + A G +M+E +LF +M + PN + L+ V +
Sbjct: 432 GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRA 491
Query: 244 QALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMP----RNDLVVWNIMVSA 299
L + + + +L + + L ++ A+++ +M + + +++ ++ A
Sbjct: 492 LELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDA 551
Query: 300 YAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRN-GSDY 358
Y +G P E L L+ M + + T I + + K + + G
Sbjct: 552 YFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQA 611
Query: 359 QVSVHNALIDMYSACNGLNSARRIFDLITDKTVV----SWSAMIKAHAVHDQCLEALSLF 414
++ A+ID N + +A +F+ + K +V ++++++ + LEAL+L
Sbjct: 612 NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALR 671
Query: 415 IEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKC 474
+M G ++D + +++ + L R S+L + +
Sbjct: 672 DKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYEL 731
Query: 475 GCIEMARKL 483
GCI+ A +L
Sbjct: 732 GCIDEAVEL 740
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 99/477 (20%), Positives = 201/477 (42%), Gaps = 59/477 (12%)
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGK--- 144
P Y+ ++ G + L + K+M + + PD + + VL S + + K
Sbjct: 79 PSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVL-SAYKSGRQYSKALS 137
Query: 145 ---MVHAQIVKLGMDAFDLVRNSLVELYEKNGFL---NAHEPLEGMSVTELAYWNNMISQ 198
++ V+ F+++ L +L + + L N+ ++ + +++
Sbjct: 138 YFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHL 197
Query: 199 AFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSL--IIVSNLC 256
G++E C +F M E ++PN I N L +H + G AL L I + +
Sbjct: 198 YSVKGEIENCRAVFEAMVAEGLKPN-IVSYNALMGAYAVHGMS-GTALSVLGDIKQNGII 255
Query: 257 GELTVNTALLSMYVKL---GSLKDARLMFEKMPRN-DLVVWNIMVSAYAGNGCPKESLEL 312
++ T LL+ Y + G K+ LM K R ++V +N ++ AY NG E++E+
Sbjct: 256 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 315
Query: 313 VYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSA 372
M + G++P++ + +++ ++ K + + G + + +N+ I Y
Sbjct: 316 FRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 375
Query: 373 CNGLNSARRIFDLITDKTV----VSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFII 428
L A ++ + K V V+++ +I + EA+S EM+ D I
Sbjct: 376 AAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME------DLSI 429
Query: 429 VINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGK 488
P ++ +S+L +Y+K G + A +F++ K
Sbjct: 430 -----PLTKEV------------------------YSSVLCAYSKQGQVTEAESIFNQMK 460
Query: 489 SS--HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSG 543
+ D+IA+ SM+ AY+ +W + EL+ +M+ + ++PD + L+ A G
Sbjct: 461 MAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 517
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 156/363 (42%), Gaps = 47/363 (12%)
Query: 192 WNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLII 251
+N MI +++ LF M+K + +P++ T L+ + + L ++
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 252 VSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPK 307
+ + + L++ G+ ++A + +KM N DLV NI++SAY
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 308 ESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQ--VSVHNA 365
++L M + VRPD T I +++L + + + ++ + V +
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 366 LIDMYSACNGLNSARRIFDLITDK----TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCG 421
++ +YS + + R +F+ + + +VS++A++ A+AVH ALS+ ++K G
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 422 TRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMAR 481
I+P V Y T LL SY + A+
Sbjct: 254 ----------IIPDV--------VSY-----------------TCLLNSYGRSRQPGKAK 278
Query: 482 KLFDEGKSSHK--DIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTAC 539
++F + + +++ +N++I AY +G + E++ QM+ +KP+ V+ LL AC
Sbjct: 279 EVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 338
Query: 540 VNS 542
S
Sbjct: 339 SRS 341
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 166/395 (42%), Gaps = 27/395 (6%)
Query: 287 RNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQ 346
RND ++N+M+ +A + ++ L + M + +PD T I++ + W
Sbjct: 10 RND--IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMN 67
Query: 347 MHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTV----VSWSAMIKAHA 402
+ ++R S +N LI+ + A + +TD V V+ + ++ A+
Sbjct: 68 LMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYK 127
Query: 403 VHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIG----ALHYVRYLHGYXXXXXXX 458
Q +ALS F MK R D I+ +K+G AL +
Sbjct: 128 SGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMR--EKRAECR 185
Query: 459 XXXXXETSLLASYAKCGCIEMARKLFDE--GKSSHKDIIAWNSMISAYSKHGEWFQCFEL 516
TS++ Y+ G IE R +F+ + +I+++N+++ AY+ HG +
Sbjct: 186 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 245
Query: 517 YNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLG 576
+K + + PD V++ LL + S K KE+F M+ +P+ + ++D G
Sbjct: 246 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL-MMRKERRKPNVVTYNALIDAYG 304
Query: 577 RAGQIDEASKI---IETVPLNSDARVYGPLLSAC-----KMHSDPRLAEVAAQKLINMEP 628
G + EA +I +E + + LL+AC K++ D L+ A + IN+
Sbjct: 305 SNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLS-AAQSRGINL-- 361
Query: 629 KNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLK 663
N Y Y A + +K + +R + +K
Sbjct: 362 -NTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 395
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 153/334 (45%), Gaps = 21/334 (6%)
Query: 366 LIDMYSACNGLNSARRIFDLITD----KTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCG 421
LI Y N A R+ +++ V+S++A+++++ +C A ++F M+ G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 422 TRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETS---LLASYAKCGCIE 478
I IL TF + + + ++ Y K G E
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 479 MARKLFDE--GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLL 536
ARK+F GK + + +NS++S + + E ++Y+QM+ S+++PD V++ L+
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKE---VSKIYDQMQRSDIQPDVVSYALLI 328
Query: 537 TACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNS- 595
A + ++ +F+EM+D G +P+ + + ++D +G +++A + +++ +
Sbjct: 329 KAYGRARREEEALSVFEEMLDA-GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 387
Query: 596 --DARVYGPLLSACKMHSDPRLAEVAAQ--KLINMEPKNAGNYVLLSNIYAAAGKWDKVA 651
D Y +LSA SD AE + K+ EP N Y L YA A +K+
Sbjct: 388 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEP-NIVTYGTLIKGYAKANDVEKMM 446
Query: 652 KMRSFLRDRGLK--KTPGCSWLESNGQVHEFRVA 683
++ +R G+K +T + ++++G+ F A
Sbjct: 447 EVYEKMRLSGIKANQTILTTIMDASGRCKNFGSA 480
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 155/357 (43%), Gaps = 25/357 (7%)
Query: 263 TALLSMYVKLGSLKDARLMFEKM----PRNDLVVWNIMVSAYAGNGCPKESLELVYCMV- 317
TAL+ Y + G +A +F +M P + + I++ + KE+ E+ ++
Sbjct: 185 TALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLD 244
Query: 318 --RSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNG 375
+S ++PD I + + E +++ + ++ G +N+L+ ++
Sbjct: 245 EKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKE 304
Query: 376 LNSARRIFDLIT----DKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVIN 431
++ +I+D + VVS++ +IKA+ + EALS+F EM G R
Sbjct: 305 VS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 361
Query: 432 ILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSS- 490
+L FA G + + + T++L++Y +E A K F K
Sbjct: 362 LLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 421
Query: 491 -HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTA---CVNSGLVD 546
+I+ + ++I Y+K + + E+Y +M+LS +K +Q ++ A C N G
Sbjct: 422 FEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFG--- 478
Query: 547 KGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKI--IETVPLNSDARVYG 601
+KEM + G P Q+ ++ L +++EA ++ I ARVYG
Sbjct: 479 SALGWYKEM-ESCGVPPDQKAKNVLLSLASTQDELEEAKELTGIRNETATIIARVYG 534
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 153/334 (45%), Gaps = 21/334 (6%)
Query: 366 LIDMYSACNGLNSARRIFDLITD----KTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCG 421
LI Y N A R+ +++ V+S++A+++++ +C A ++F M+ G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 422 TRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETS---LLASYAKCGCIE 478
I IL TF + + + ++ Y K G E
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 479 MARKLFDE--GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLL 536
ARK+F GK + + +NS++S + + E ++Y+QM+ S+++PD V++ L+
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKE---VSKIYDQMQRSDIQPDVVSYALLI 321
Query: 537 TACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNS- 595
A + ++ +F+EM+D G +P+ + + ++D +G +++A + +++ +
Sbjct: 322 KAYGRARREEEALSVFEEMLDA-GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380
Query: 596 --DARVYGPLLSACKMHSDPRLAEVAAQ--KLINMEPKNAGNYVLLSNIYAAAGKWDKVA 651
D Y +LSA SD AE + K+ EP N Y L YA A +K+
Sbjct: 381 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEP-NIVTYGTLIKGYAKANDVEKMM 439
Query: 652 KMRSFLRDRGLK--KTPGCSWLESNGQVHEFRVA 683
++ +R G+K +T + ++++G+ F A
Sbjct: 440 EVYEKMRLSGIKANQTILTTIMDASGRCKNFGSA 473
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 155/357 (43%), Gaps = 25/357 (7%)
Query: 263 TALLSMYVKLGSLKDARLMFEKM----PRNDLVVWNIMVSAYAGNGCPKESLELVYCMV- 317
TAL+ Y + G +A +F +M P + + I++ + KE+ E+ ++
Sbjct: 178 TALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLD 237
Query: 318 --RSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNG 375
+S ++PD I + + E +++ + ++ G +N+L+ ++
Sbjct: 238 EKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKE 297
Query: 376 LNSARRIFDLIT----DKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVIN 431
++ +I+D + VVS++ +IKA+ + EALS+F EM G R
Sbjct: 298 VS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 354
Query: 432 ILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSS- 490
+L FA G + + + T++L++Y +E A K F K
Sbjct: 355 LLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 414
Query: 491 -HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTA---CVNSGLVD 546
+I+ + ++I Y+K + + E+Y +M+LS +K +Q ++ A C N G
Sbjct: 415 FEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFG--- 471
Query: 547 KGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKI--IETVPLNSDARVYG 601
+KEM + G P Q+ ++ L +++EA ++ I ARVYG
Sbjct: 472 SALGWYKEM-ESCGVPPDQKAKNVLLSLASTQDELEEAKELTGIRNETATIIARVYG 527
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/477 (20%), Positives = 201/477 (42%), Gaps = 59/477 (12%)
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGK--- 144
P Y+ ++ G + L + K+M + + PD + + VL S + + K
Sbjct: 211 PSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVL-SAYKSGRQYSKALS 269
Query: 145 ---MVHAQIVKLGMDAFDLVRNSLVELYEKNGFL---NAHEPLEGMSVTELAYWNNMISQ 198
++ V+ F+++ L +L + + L N+ ++ + +++
Sbjct: 270 YFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHL 329
Query: 199 AFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSL--IIVSNLC 256
G++E C +F M E ++PN I N L +H + G AL L I + +
Sbjct: 330 YSVKGEIENCRAVFEAMVAEGLKPN-IVSYNALMGAYAVHGMS-GTALSVLGDIKQNGII 387
Query: 257 GELTVNTALLSMYVKL---GSLKDARLMFEKMPRN-DLVVWNIMVSAYAGNGCPKESLEL 312
++ T LL+ Y + G K+ LM K R ++V +N ++ AY NG E++E+
Sbjct: 388 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 447
Query: 313 VYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSA 372
M + G++P++ + +++ ++ K + + G + + +N+ I Y
Sbjct: 448 FRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 507
Query: 373 CNGLNSARRIFDLITDKTV----VSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFII 428
L A ++ + K V V+++ +I + EA+S EM+ D I
Sbjct: 508 AAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME------DLSI 561
Query: 429 VINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGK 488
P ++ +S+L +Y+K G + A +F++ K
Sbjct: 562 -----PLTKEV------------------------YSSVLCAYSKQGQVTEAESIFNQMK 592
Query: 489 SS--HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSG 543
+ D+IA+ SM+ AY+ +W + EL+ +M+ + ++PD + L+ A G
Sbjct: 593 MAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 649
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 156/363 (42%), Gaps = 47/363 (12%)
Query: 192 WNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLII 251
+N MI +++ LF M+K + +P++ T L+ + + L ++
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 252 VSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPK 307
+ + + L++ G+ ++A + +KM N DLV NI++SAY
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 308 ESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQ--VSVHNA 365
++L M + VRPD T I +++L + + + ++ + V +
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 366 LIDMYSACNGLNSARRIFDLITDK----TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCG 421
++ +YS + + R +F+ + + +VS++A++ A+AVH ALS+ ++K G
Sbjct: 326 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 385
Query: 422 TRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMAR 481
I+P V Y T LL SY + A+
Sbjct: 386 ----------IIPDV--------VSY-----------------TCLLNSYGRSRQPGKAK 410
Query: 482 KLFDEGKSSHK--DIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTAC 539
++F + + +++ +N++I AY +G + E++ QM+ +KP+ V+ LL AC
Sbjct: 411 EVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 470
Query: 540 VNS 542
S
Sbjct: 471 SRS 473
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 164/393 (41%), Gaps = 23/393 (5%)
Query: 287 RNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQ 346
RND ++N+M+ +A + ++ L + M + +PD T I++ + W
Sbjct: 142 RND--IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMN 199
Query: 347 MHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTV----VSWSAMIKAHA 402
+ ++R S +N LI+ + A + +TD V V+ + ++ A+
Sbjct: 200 LMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYK 259
Query: 403 VHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXX--XXX 460
Q +ALS F MK R D I+ +K+G L
Sbjct: 260 SGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD 319
Query: 461 XXXETSLLASYAKCGCIEMARKLFDE--GKSSHKDIIAWNSMISAYSKHGEWFQCFELYN 518
TS++ Y+ G IE R +F+ + +I+++N+++ AY+ HG +
Sbjct: 320 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 379
Query: 519 QMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRA 578
+K + + PD V++ LL + S K KE+F M+ +P+ + ++D G
Sbjct: 380 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL-MMRKERRKPNVVTYNALIDAYGSN 438
Query: 579 GQIDEASKI---IETVPLNSDARVYGPLLSAC-----KMHSDPRLAEVAAQKLINMEPKN 630
G + EA +I +E + + LL+AC K++ D L+ A + IN+ N
Sbjct: 439 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLS-AAQSRGINL---N 494
Query: 631 AGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLK 663
Y Y A + +K + +R + +K
Sbjct: 495 TAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 527
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 116/582 (19%), Positives = 229/582 (39%), Gaps = 62/582 (10%)
Query: 24 QTRFFTTSSLLDLCTKPQHLQQIHARFFLHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFY 83
++++ + LLD ++L + A + + + K +D + + G S
Sbjct: 188 ESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPS----- 242
Query: 84 FTENPDSVIYSAILRNLSQFGEH-EKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSH-E 141
P V Y+ IL + G K L + EM K + DE +CS VL +C
Sbjct: 243 ----PTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLR 298
Query: 142 QGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNA-----HEPLEGMSVTELAYWNNMI 196
+ K A++ G + + N+L++++ K G E E + +N ++
Sbjct: 299 EAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELV 358
Query: 197 SQAFESGKMEECFQLFSRMRKENIQPNSITVINLL----RSTVDLHLLKIGQALHSLIIV 252
+ +G +E + M K+ + PN+IT ++ ++ + LK+ ++ V
Sbjct: 359 AAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCV 418
Query: 253 SNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPKE 308
N C T N A+LS+ K + M M N + WN M++ G K
Sbjct: 419 PNTC---TYN-AVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKF 474
Query: 309 SLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALID 368
+ M G PD T IS+ + +M+ + R G + V+ +NAL++
Sbjct: 475 VNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLN 534
Query: 369 MYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFII 428
+ S + I+D + ++++ QC ++ ++ R+
Sbjct: 535 ALARKGDWRSGENV---ISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK--- 588
Query: 429 VINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGK 488
I P++ + L LLA++ KC + + + F K
Sbjct: 589 EGQIFPSWMLLRTL------------------------LLANF-KCRALAGSERAFTLFK 623
Query: 489 --SSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVD 546
D++ +NSM+S ++++ + Q + ++ + PD VT+ L+ V G
Sbjct: 624 KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECW 683
Query: 547 KGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKII 588
K +EI K + + +P + ++ R G + EA +++
Sbjct: 684 KAEEILKTL-EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRML 724
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 102/207 (49%), Gaps = 14/207 (6%)
Query: 465 TSLLASYAKCGCIEMARKLFDEGK--SSHKDIIAWNSMISAYSKHGE-WFQCFELYNQMK 521
T++L +Y++ G E A LF+ K ++ +N ++ + K G W + + ++M+
Sbjct: 214 TTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMR 273
Query: 522 LSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQI 581
+K D+ T +L+AC GL+ + KE F E+ GY+P + ++ + G+AG
Sbjct: 274 SKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSC-GYEPGTVTYNALLQVFGKAGVY 332
Query: 582 DEASKIIETVPLNS---DARVYGPLLSACKMHSDPRLAEVAAQKLINMEPK----NAGNY 634
EA +++ + NS D+ Y L++A + ++ AA + M K NA Y
Sbjct: 333 TEALSVLKEMEENSCPADSVTYNELVAA---YVRAGFSKEAAGVIEMMTKKGVMPNAITY 389
Query: 635 VLLSNIYAAAGKWDKVAKMRSFLRDRG 661
+ + Y AGK D+ K+ +++ G
Sbjct: 390 TTVIDAYGKAGKEDEALKLFYSMKEAG 416
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/414 (18%), Positives = 150/414 (36%), Gaps = 78/414 (18%)
Query: 263 TALLSMYVKLGSLKDARLMFEKM----PRNDLVVWNIMVSAYAGNGCP-KESLELVYCMV 317
T +L Y + G + A +FE+M P LV +N+++ + G ++ L ++ M
Sbjct: 214 TTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMR 273
Query: 318 RSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLN 377
G++ D FT +S+ + K+ A + G
Sbjct: 274 SKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCG---------------------- 311
Query: 378 SARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFA 437
+ V+++A+++ EALS+ EM+ D + ++ +
Sbjct: 312 ---------YEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYV 362
Query: 438 KIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSH--KDII 495
+ G + T+++ +Y K G + A KLF K + +
Sbjct: 363 RAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTC 422
Query: 496 AWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEM 555
+N+++S K + ++ MK + P++ T+ +L C N G+ +F+EM
Sbjct: 423 TYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREM 482
Query: 556 VDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPL----LSACKMHS 611
G++P ++ ++ GR G +ASK+ YG + +AC
Sbjct: 483 KSC-GFEPDRDTFNTLISAYGRCGSEVDASKM------------YGEMTRAGFNAC---- 525
Query: 612 DPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRGLKKT 665
Y L N A G W + S ++ +G K T
Sbjct: 526 -------------------VTTYNALLNALARKGDWRSGENVISDMKSKGFKPT 560
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/476 (19%), Positives = 195/476 (40%), Gaps = 19/476 (3%)
Query: 122 YPDEESCSFVLRSCFSVSHEQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPL 181
+P+ + S L + + G++ AQ L M +R S V E +N+ +
Sbjct: 106 FPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRM-----IRRSGVSRLE---IVNSLDST 157
Query: 182 EGMSVTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLK 241
+ + ++ +I ++ K+ E + F+ +R + + L+ S V + ++
Sbjct: 158 FSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVE 217
Query: 242 IGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMF----EKMPRNDLVVWNIMV 297
+ ++ I S + + +++ K G ++ EK D+V +N ++
Sbjct: 218 LAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLI 277
Query: 298 SAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSD 357
SAY+ G +E+ EL+ M G P ++T I+ + + E K++ A ++R+G
Sbjct: 278 SAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS 337
Query: 358 YQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVS----WSAMIKAHAVHDQCLEALSL 413
+ + +L+ + ++F + + VV +S+M+ +AL
Sbjct: 338 PDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMY 397
Query: 414 FIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAK 473
F +K G D +I ++ + + G + L ++L K
Sbjct: 398 FNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCK 457
Query: 474 CGCIEMARKLFDE--GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVT 531
+ A KLF+E ++ D +I + K G EL+ +MK ++ D VT
Sbjct: 458 RKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVT 517
Query: 532 FLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKI 587
+ LL G +D KEI+ +MV P+ ++ +V+ L G + EA ++
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVS-KEILPTPISYSILVNALCSKGHLAEAFRV 572
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 87/440 (19%), Positives = 172/440 (39%), Gaps = 28/440 (6%)
Query: 188 ELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALH 247
++ +N +IS G MEE F+L + M + P T ++ + + +
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 248 SLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRND----LVVWNIMVSAYAGN 303
+ ++ S L + T +LL K G + + +F M D LV ++ M+S + +
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 304 GCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVH 363
G ++L + +G+ PD I + + +++ G V +
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448
Query: 364 NALIDMYSACNGLNSARRIFDLITDKTVV----SWSAMIKAHAVHDQCLEALSLFIEMKL 419
N ++ L A ++F+ +T++ + + + +I H A+ LF +MK
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 420 CGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEM 479
R+D + +L F K+G + + + + L+ + G +
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE 568
Query: 480 ARKLFDE--GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLT 537
A +++DE K+ ++ NSMI Y + G +M PD +++ L+
Sbjct: 569 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIY 628
Query: 538 ACVNS-------GLVDKGKEIFKEMV-DLYGYQPSQEHHACMVDLLGRAGQIDEASKIIE 589
V GLV K +E +V D++ Y S H C R Q+ EA ++
Sbjct: 629 GFVREENMSKAFGLVKKMEEEQGGLVPDVFTYN-SILHGFC------RQNQMKEAEVVLR 681
Query: 590 TV---PLNSDARVYGPLLSA 606
+ +N D Y +++
Sbjct: 682 KMIERGVNPDRSTYTCMING 701
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/513 (16%), Positives = 190/513 (37%), Gaps = 112/513 (21%)
Query: 87 NPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMV 146
+P Y+ ++ L + G++E+ ++ EM+ + PD S RS + ++G +V
Sbjct: 302 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD----STTYRSLLMEACKKGDVV 357
Query: 147 HAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTELAYWNNMISQAFESGKME 206
+ V M + D+ V +L +++M+S SG ++
Sbjct: 358 ETEKVFSDMRSRDV-------------------------VPDLVCFSSMMSLFTRSGNLD 392
Query: 207 ECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALL 266
+ F+ +++ + P+++ L++ ++ + L + ++ ++ +L
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 267 SMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
K L +A +F +M D I++ + G + ++EL M +R
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 323 PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRI 382
D+ T +N L+D + +++A+ I
Sbjct: 513 LDVVT-----------------------------------YNTLLDGFGKVGDIDTAKEI 537
Query: 383 F-DLITDK---TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAK 438
+ D+++ + T +S+S ++ A EA ++ EM I NI PT
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEM----------ISKNIKPTVMI 587
Query: 439 IGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSH--KDIIA 496
S++ Y + G ++ S D I+
Sbjct: 588 C-------------------------NSMIKGYCRSGNASDGESFLEKMISEGFVPDCIS 622
Query: 497 WNSMISAYSKHGEWFQCFELYNQM--KLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKE 554
+N++I + + + F L +M + + PD T+ +L + + + + ++
Sbjct: 623 YNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRK 682
Query: 555 MVDLYGYQPSQEHHACMVDLLGRAGQIDEASKI 587
M++ G P + + CM++ + EA +I
Sbjct: 683 MIE-RGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 122/282 (43%), Gaps = 18/282 (6%)
Query: 89 DSVIYSAILRNLSQ---FGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKM 145
D V Y+ IL L + GE +K L+ EM E++++PD + + ++ + + Q M
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADK---LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAM 500
Query: 146 VHAQIVKLGMDAFDLVR-NSLVELYEKNGFLN-AHEPLEGMSVTEL----AYWNNMISQA 199
Q +K D+V N+L++ + K G ++ A E M E+ ++ +++
Sbjct: 501 ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Query: 200 FESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGEL 259
G + E F+++ M +NI+P + ++++ G++ +I +
Sbjct: 561 CSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDC 620
Query: 260 TVNTALLSMYVKLGSLKDARLMFEKMPRN------DLVVWNIMVSAYAGNGCPKESLELV 313
L+ +V+ ++ A + +KM D+ +N ++ + KE+ ++
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL 680
Query: 314 YCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNG 355
M+ GV PD T I+ + ++H +++ G
Sbjct: 681 RKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/503 (19%), Positives = 201/503 (39%), Gaps = 52/503 (10%)
Query: 193 NNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIV 252
NN + Q +G++EE F+ M P+ I L+R L + + ++
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 253 SNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRN-DLVVWNIMVSAYAGNGCPKESLE 311
S ++ ++S Y K G + +A + ++M + D+V +N ++ + +G K+++E
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 312 LVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYS 371
++ M++ PD+ T I + + ++ + G V +N L++
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 372 ACNGLNSARRIFDLITDK----TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCG---TRV 424
L+ A + + + V++ + ++++ + ++A L +M G + V
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 425 DFIIVINILPTFAKIG-----------------ALHYVRYLHGYXXXXXXXXXXXXETSL 467
F I+IN L +G +L Y LHG+
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA------- 398
Query: 468 LASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKP 527
IE ++ G + DI+ +N+M++A K G+ E+ NQ+ P
Sbjct: 399 ---------IEYLERMVSRG--CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Query: 528 DQVTFLGLLTACVNSGLVDKGKEIFKEM--VDLYGYQPSQEHHACMVDLLGRAGQIDEAS 585
+T+ ++ +G K ++ EM DL +P ++ +V L R G++DEA
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL---KPDTITYSSLVGGLSREGKVDEAI 504
Query: 586 KI---IETVPLNSDARVYGP-LLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIY 641
K E + + +A + +L CK R + + N +Y +L
Sbjct: 505 KFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Query: 642 AAAGKWDKVAKMRSFLRDRGLKK 664
A G + ++ + L ++GL K
Sbjct: 565 AYEGMAKEALELLNELCNKGLMK 587
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/360 (17%), Positives = 148/360 (41%), Gaps = 37/360 (10%)
Query: 87 NPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMV 146
+PD V Y+ ILR+L G+ ++ + + M+++ YPD + + ++ + + +
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA----TCRDSGVG 256
Query: 147 HAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTELAYWNNMISQAFESGKME 206
HA M D +R+ ++ +N +++ + G+++
Sbjct: 257 HA------MKLLDEMRDR-------------------GCTPDVVTYNVLVNGICKEGRLD 291
Query: 207 ECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALL 266
E + + M QPN IT +LRS + L + ++ + L+
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 267 SMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
+ + G L A + EKMP++ + + +N ++ + ++E + MV G
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 323 PDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRI 382
PD+ T ++++ + E ++ + G + +N +ID + A ++
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 383 FDLITDKTV----VSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAK 438
D + K + +++S+++ + + EA+ F E + G R + + +I+ K
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/513 (19%), Positives = 214/513 (41%), Gaps = 19/513 (3%)
Query: 91 VIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMVHAQI 150
+ Y+A++ ++ + EK L L +M + D + S V++S + M+
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 151 VKLGMDAFDL---VRNSLVELYEKNGFLNAHEPLEGMS-----VTELAYWNNMISQAFES 202
++ D +L + N ++ + K+G + L GM+ + A ++IS +S
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 203 GKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVN 262
G+ E LF +R+ I+P + LL+ V LK +++ S + + +
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377
Query: 263 TALLSMYVKLGSLKDARLMFEKMPRNDL----VVWNIMVSAYAGNGCPKESLELVYCMVR 318
+ L+ YV G + AR++ ++M D+ V++ +++ + G +++ +++ M
Sbjct: 378 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS 437
Query: 319 SGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNS 378
GV+PD I + + + ++ G + N LID +
Sbjct: 438 IGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIV 497
Query: 379 ARRIFDLITDKT----VVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILP 434
A +F+ + + +++ MI ++ ++ + L +MK G + + ++
Sbjct: 498 AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 557
Query: 435 TFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSS--HK 492
+ K G + +L+ +YA+ G E A F S
Sbjct: 558 VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 617
Query: 493 DIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIF 552
++A NS+I+A+ + + F + MK + VKPD VT+ L+ A + K ++
Sbjct: 618 SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVY 677
Query: 553 KEMVDLYGYQPSQEHHACMVDLLGRAGQIDEAS 585
+EM+ + G +P ++ + + L Q AS
Sbjct: 678 EEMI-MSGCKPDRKARSMLRSALRYMKQTLRAS 709
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/387 (19%), Positives = 153/387 (39%), Gaps = 54/387 (13%)
Query: 291 VVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGK--QMH 348
+ +N ++ A A N +++L L+ M + G + D I S+T+ + +++
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 349 AHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSA----MIKAHAVH 404
+ R+ + V + N +I ++ + A ++ + + + +A +I A A
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 405 DQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXE 464
+ LEA +LF E++ G I P AL
Sbjct: 318 GRTLEAEALFEELRQSG----------IKPRTRAYNAL---------------------- 345
Query: 465 TSLLASYAKCGCIEMARKLFDE--GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKL 522
L Y K G ++ A + E + D ++ +I AY G W + +M+
Sbjct: 346 ---LKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 523 SNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQID 582
+V+P+ F LL + G K ++ KEM + G +P ++ + ++D G+ +D
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI-GVKPDRQFYNVVIDTFGKFNCLD 461
Query: 583 EASKIIETV---PLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKN----AGNYV 635
A + + + D + L+ H +AE + ME + A Y
Sbjct: 462 HAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAE---EMFEAMERRGCLPCATTYN 518
Query: 636 LLSNIYAAAGKWDKVAKMRSFLRDRGL 662
++ N Y +WD + ++ ++ +G+
Sbjct: 519 IMINSYGDQERWDDMKRLLGKMKSQGI 545
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 142/321 (44%), Gaps = 22/321 (6%)
Query: 53 HGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTE----NPDSVIYSAILRNLSQFGEHEK 108
G+ + S L+D Y G ++ V E P+S ++S +L GE +K
Sbjct: 368 RGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQK 427
Query: 109 TLFLYKEMVEKSMYPDEESCSFVLRSCFSVS-HEQGKMVHAQIVKLGMDAFDLVRNSLVE 167
T + KEM + PD + + V+ + + + +++ G++ + N+L++
Sbjct: 428 TFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLID 487
Query: 168 LYEKNG-FLNAHEPLEGMS----VTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQP 222
+ K+G + A E E M + +N MI+ + + ++ +L +M+ + I P
Sbjct: 488 CHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILP 547
Query: 223 NSITVINLLRSTVDLHLL--KIGQALHSL--IIVSNLCGELTVNTALLSMYVKLGSLKDA 278
N +T L VD++ + A+ L + L T+ AL++ Y + G + A
Sbjct: 548 NVVTHTTL----VDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQA 603
Query: 279 ----RLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISS 334
R+M + L+ N +++A+ + E+ ++ M +GV+PD+ T + +
Sbjct: 604 VNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKA 663
Query: 335 ITQLKHTEWGKQMHAHVIRNG 355
+ ++ + ++ +I +G
Sbjct: 664 LIRVDKFQKVPVVYEEMIMSG 684
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 138/318 (43%), Gaps = 34/318 (10%)
Query: 390 TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLH 449
T+ ++ A+ K + EAL + ++ G VDF ++ + ++ AL R +H
Sbjct: 80 TIETFDALCKQVKIR----EALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVH 135
Query: 450 GYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISAYSKHGE 509
+++ Y+ C + A +F+E + + W +MI +K+GE
Sbjct: 136 DCITPLDARSYH----TVIEMYSGCRSTDDALNVFNEMPKRNSE--TWGTMIRCLAKNGE 189
Query: 510 WFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHA 569
+ +++ + KPD+ F + ACV+ G +++G F+ M YG S E +
Sbjct: 190 GERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYV 249
Query: 570 CMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEP- 628
++++L G +DEA +E + + ++ L++ C + L + A+ + ++
Sbjct: 250 NVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDAS 309
Query: 629 -----KNAGNYVLLSNIYAAAGKWDKVAKMR--SFLRDRGLKKTPGCSWLESNGQVHEFR 681
NAG L A+ +K+ ++R +RD K+ +HEFR
Sbjct: 310 RMSKESNAG----LVAAKASDSAMEKLKELRYCQMIRDDPKKR------------MHEFR 353
Query: 682 VADQSHPRSVDIYSILKV 699
D SH +V + LKV
Sbjct: 354 AGDTSHLGTVSAFRSLKV 371
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 116/599 (19%), Positives = 245/599 (40%), Gaps = 92/599 (15%)
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMVH 147
P Y+ +LRN+ + + + L+ EM ++++ PD + S ++ S
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITS------------- 199
Query: 148 AQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVT-ELAYWNNMISQAFESGKME 206
K GM FD L+ + +E V+ +L ++N+I +
Sbjct: 200 --FGKEGM--FD-------------SALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYS 242
Query: 207 ECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALL 266
+ +FSR+++ I P+ + +++ L + + L + + + + LL
Sbjct: 243 KAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLL 302
Query: 267 SMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVR 322
S+YV+ +A +F +M DL NIM+ Y KE+ L + + + +
Sbjct: 303 SVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIE 362
Query: 323 PDM--FTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSV--HNALIDMYSACNGLNS 378
P++ + I + +L +G+ +H + D + +V +N +I +Y
Sbjct: 363 PNVVSYNTILRVYGEAEL----FGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEK 418
Query: 379 ARRIFDLITDKTV----VSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILP 434
A + + + + +++S +I + A +LF +++ G +D ++ ++
Sbjct: 419 ATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIV 478
Query: 435 TFAKIGAL-HYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMA----RKLFDEGKS 489
+ ++G + H R LH ET++ AK G E A R+ F+ G+
Sbjct: 479 AYERVGLMGHAKRLLH----ELKLPDNIPRETAI-TILAKAGRTEEATWVFRQAFESGEV 533
Query: 490 SHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGK 549
KDI + MI+ YS++ + E++ +M+ + PD +L A +K
Sbjct: 534 --KDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKAD 591
Query: 550 EIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNSDARVYGPLLSACKM 609
+++EM + P E H M+ L + + + ++
Sbjct: 592 TVYREMQEEGCVFPD-EVHFQMLSLYSSKKDFEMVESLFQ------------------RL 632
Query: 610 HSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSFLRDRG-LKKTPG 667
SDP V +++L +++++ +Y A K + +++ + +R+RG LK PG
Sbjct: 633 ESDP---NVNSKEL----------HLVVAALYERADKLNDASRVMNRMRERGILKPFPG 678
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/404 (17%), Positives = 162/404 (40%), Gaps = 9/404 (2%)
Query: 289 DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMH 348
D ++ +++++ G +L + M + V D+ I +L +
Sbjct: 189 DRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIF 248
Query: 349 AHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTV----VSWSAMIKAHAVH 404
+ + R+G + +N++I++Y AR + + + V VS+S ++ + +
Sbjct: 249 SRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVEN 308
Query: 405 DQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXE 464
+ LEALS+F EMK +D ++ + ++ + L
Sbjct: 309 HKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSY 368
Query: 465 TSLLASYAKCGCIEMARKLFD--EGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKL 522
++L Y + A LF + K ++++ +N+MI Y K E + L +M+
Sbjct: 369 NTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQS 428
Query: 523 SNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQID 582
++P+ +T+ +++ +G +D+ +F+++ G + Q + M+ R G +
Sbjct: 429 RGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRS-SGVEIDQVLYQTMIVAYERVGLMG 487
Query: 583 EASKIIETVPLNSDARVYGPLLSACKMHSDPRLAEVAAQKLINMEPKNAGNYVLLSNIYA 642
A +++ + L + + K V Q + E K+ + + N+Y+
Sbjct: 488 HAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYS 547
Query: 643 AAGKWDKVAKMRSFLRDRGLKKTPG--CSWLESNGQVHEFRVAD 684
++ V ++ +R G L + G+ EF AD
Sbjct: 548 RNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKAD 591
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 104/530 (19%), Positives = 213/530 (40%), Gaps = 73/530 (13%)
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ--GKM 145
P + +S +L +++ + + + L ++M + P +L +CF +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGI-PHNHYTYSILINCFCRRSQLPLALA 137
Query: 146 VHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTELAY----------WNNM 195
V +++KLG + + +SL+ NG+ ++ E +++ + + +N +
Sbjct: 138 VLGKMMKLGYEPNIVTLSSLL-----NGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTL 192
Query: 196 ISQAFESGKMEECFQLFSRMRKENIQPNSIT---VINLL--RSTVDLHLLKIGQALHSLI 250
I F K E L RM + QP+ +T V+N L R DL + + +
Sbjct: 193 IHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKL 252
Query: 251 IVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMP----RNDLVVWNIMVSAYAGNGCP 306
G L NT ++ K + DA +F++M R ++V ++ ++S G
Sbjct: 253 EP----GVLIYNT-IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 307 KESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNAL 366
++ L+ M+ + PD+FT I + + ++++ +++ D + +++L
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 367 IDMYSACNGLNSARRIFDLITDK----TVVSWSAMIKAHAVHDQCLEALSLFIEMK---L 419
I+ + + L+ A+++F+ + K VV+++ +IK + + E + +F EM L
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 420 CGTRVDFIIVI--------------------------------NILPTFAKIGALHYVRY 447
G V + I+I +L K G L
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 487
Query: 448 LHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEG--KSSHKDIIAWNSMISAYS 505
+ Y ++ K G +E LF K D++A+N+MIS +
Sbjct: 488 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Query: 506 KHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEM 555
+ G + L+ +MK P+ + L+ A + G + E+ KEM
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/448 (19%), Positives = 183/448 (40%), Gaps = 46/448 (10%)
Query: 187 TELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLH----LLKI 242
T Y + K+++ LF M K P+ I LL + ++ ++ +
Sbjct: 44 TSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISL 103
Query: 243 GQALHSL----------IIVSNLC--GELTVNTALLSMYVKLG---------SLKDARLM 281
G+ + +L I+++ C +L + A+L +KLG SL +
Sbjct: 104 GEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH 163
Query: 282 FEKMPRNDLVVWNIMVSAYAGNGC--------------PKESLELVYCMVRSGVRPDMFT 327
+++ +V + V+ Y N E++ L+ MV G +PD+ T
Sbjct: 164 SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVT 223
Query: 328 AIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLIT 387
++ + + T+ + + + + V ++N +ID ++ A +F +
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283
Query: 388 DK----TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALH 443
K VV++S++I + + +A L +M D ++ F K G L
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 343
Query: 444 YVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSH--KDIIAWNSMI 501
L+ +SL+ + ++ A+++F+ S H D++ +N++I
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 502 SAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGY 561
+ K+ + E++ +M + + VT+ L+ +G D +EIFKEMV G
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS-DGV 462
Query: 562 QPSQEHHACMVDLLGRAGQIDEASKIIE 589
P+ + ++D L + G++++A + E
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFE 490
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 102/496 (20%), Positives = 200/496 (40%), Gaps = 67/496 (13%)
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMV-EKSMYPDEESCSFVLRSCFSVSHEQGKMV 146
P S Y++++ L Q G+HEK +Y EM E +PD + S S+E
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDT-----ITYSALISSYE----- 244
Query: 147 HAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVTELAYWNNMISQAFESGKME 206
KLG + +S + L+++ N +P E + T L + F+ GK+E
Sbjct: 245 -----KLGRN------DSAIRLFDEMKD-NCMQPTEKIYTTLLGIY-------FKVGKVE 285
Query: 207 ECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALL 266
+ LF M++ P T L++ + + ++ L ++ L+
Sbjct: 286 KALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLM 345
Query: 267 SMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMF 326
++ K+G +++ +F +M +W + + N K +F
Sbjct: 346 NILGKVGRVEELTNVFSEMG-----MWRCTPTVVSYNTVIKA----------------LF 384
Query: 327 TAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLI 386
+ +S ++ W +M A + + S++ S+ LID Y N + A + + +
Sbjct: 385 ESKAHVSEVSS-----WFDKMKADSV-SPSEFTYSI---LIDGYCKTNRVEKALLLLEEM 435
Query: 387 TDKTV----VSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGAL 442
+K ++ ++I A + A LF E+K V + ++ F K G L
Sbjct: 436 DEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKL 495
Query: 443 HYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFD--EGKSSHKDIIAWNSM 500
L +L++ K G I A L E DI + N +
Sbjct: 496 SEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNII 555
Query: 501 ISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYG 560
++ +++ G + E++ +K S +KPD VT+ LL ++G+ ++ + +EM D G
Sbjct: 556 LNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKD-KG 614
Query: 561 YQPSQEHHACMVDLLG 576
++ ++ ++D +G
Sbjct: 615 FEYDAITYSSILDAVG 630
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 493 DIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIF 552
D I ++++IS+Y K G L+++MK + ++P + + LL G V+K ++F
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 553 KEMVDLYGYQPSQEHHACMVDLLGRAGQIDEA 584
+EM G P+ + ++ LG+AG++DEA
Sbjct: 292 EEM-KRAGCSPTVYTYTELIKGLGKAGRVDEA 322
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 135/322 (41%), Gaps = 17/322 (5%)
Query: 251 IVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKESL 310
+++ LC +N AL Y M +K R D V +N ++S + +G ++
Sbjct: 190 VINGLCKNRDLNNALEVFYC----------MEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 311 ELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMY 370
L+ MV+ + P++ I + + + + ++ +IR V +N+LI+ +
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 371 SACNGLNSARRIFDLITDK----TVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDF 426
L A+ +FDL+ K VV+++ +I + + + LF EM G D
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 427 IIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDE 486
++ + + G L+ + + LL G IE A + ++
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419
Query: 487 GKSSHKD--IIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGL 544
+ S D II +N +I + + + + L+ + VKPD + ++ +++ GL
Sbjct: 420 LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479
Query: 545 VDKGKEIFKEMVDLYGYQPSQE 566
+ ++ + M + G+ PS+
Sbjct: 480 QREADKLCRRMKE-DGFMPSER 500
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/403 (19%), Positives = 155/403 (38%), Gaps = 51/403 (12%)
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCF-------SVSH 140
P V ++ +L +++ + + ++LY +M + D S + +L CF
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT-ILIHCFCRCSRLSLALA 135
Query: 141 EQGKMV----HAQIVKLG---------------------MDAFDLVRNSLVELYEKNGFL 175
GKM+ IV LG MD F V N ++ NG
Sbjct: 136 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 195
Query: 176 NAHEPLEGMSV----------TELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSI 225
+ + V + +N +IS SG+ + +L M K I PN I
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255
Query: 226 TVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKM 285
L+ + V L + L+ +I ++ + +L++ + G L DA+ MF+ M
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 286 PRN----DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHT 341
D+V +N +++ + + ++ ++L M G+ D FT I Q
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 342 EWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDLIT----DKTVVSWSAM 397
+++ ++ G + +N L+D + A + + + D +++++ +
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435
Query: 398 IKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIG 440
I+ D+ EA LF + G + D I I ++ + G
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/304 (19%), Positives = 130/304 (42%), Gaps = 36/304 (11%)
Query: 52 LHGLHQNSSLSSKLMDCYTKFGLPGLSQKVFYFTEN----PDSVIYSAILRNLSQFGEHE 107
++GL +N L++ L +VFY E D+V Y+ ++ LS G
Sbjct: 191 INGLCKNRDLNNAL--------------EVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 108 KTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQGKMVHA-----QIVKLGMDAFDLVR 162
L ++MV++ + P+ + ++G ++ A ++++ +
Sbjct: 237 DAARLLRDMVKRKIDPN----VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292
Query: 163 NSLVELYEKNGFLNAHEPLEGMSVT-----ELAYWNNMISQAFESGKMEECFQLFSRMRK 217
NSL+ + +G L + + + V+ ++ +N +I+ +S ++E+ +LF M
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY 352
Query: 218 ENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKD 277
+ + ++ T L+ L + Q + + ++ + ++ LL G ++
Sbjct: 353 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 412
Query: 278 ARLMFEKMPRN----DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAIS 333
A +M E + ++ D++ +NI++ KE+ L + R GV+PD I IS
Sbjct: 413 ALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 472
Query: 334 SITQ 337
+ +
Sbjct: 473 GLCR 476
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 156/374 (41%), Gaps = 13/374 (3%)
Query: 308 ESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALI 367
E+L+L MV S P + ++ I ++K + + H+ G + + N L+
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 368 DMYSACNGLNSAR----RIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTR 423
+ + + A ++ L + +V+++++I + ++ EA+S+ +M G +
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 424 VDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKL 483
D ++ I+ + K G ++Y L TSL+ G A L
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 484 FDEGKSSHK---DIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACV 540
G + K D+I +N++I A+ K G++ ELYN+M ++ P+ T+ L+
Sbjct: 235 L-RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 541 NSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVP---LNSDA 597
G VD+ +++F M + G P + +++ + ++D+A KI + L +
Sbjct: 294 MEGCVDEARQMFYLM-ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 598 RVYGPLLSACKMHSDPRLA-EVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKMRSF 656
Y L+ P +A EV + + P N Y +L + GK K +
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 657 LRDRGLKKTPGCSW 670
++ R + W
Sbjct: 413 MQKREMDGVAPNIW 426
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/351 (16%), Positives = 144/351 (41%), Gaps = 26/351 (7%)
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHEQ--GKM 145
P + ++ +L +++ + + + L + + D +C+ +L +CF S +
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN-LLMNCFCQSSQPYLASS 128
Query: 146 VHAQIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMSVT----------ELAYWNNM 195
+++KLG + + SL+ NGF + E MS+ ++ + +
Sbjct: 129 FLGKMMKLGFEPDIVTFTSLI-----NGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTI 183
Query: 196 ISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNL 255
I ++G + LF +M I+P+ + +L+ + + +L + +
Sbjct: 184 IDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI 243
Query: 256 CGELTVNTALLSMYVKLGSLKDARLMFEKMPR----NDLVVWNIMVSAYAGNGCPKESLE 311
++ AL+ +VK G DA ++ +M R ++ + +++ + GC E+ +
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Query: 312 LVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYS 371
+ Y M G PD+ I+ + K + ++ + + G + LI +
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFG 363
Query: 372 ACNGLNSARRIFDLITDKTVV----SWSAMIKAHAVHDQCLEALSLFIEMK 418
N A+ +F + + V +++ ++ + + +AL +F +M+
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ 414
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/475 (17%), Positives = 199/475 (41%), Gaps = 51/475 (10%)
Query: 192 WNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLII 251
+N+++ +++ + ++ M+++ +PN T LL++ + K+ A L+
Sbjct: 149 YNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNN--KVDGAKKLLVE 206
Query: 252 VSN--LCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVVWNIMVSAYAGNGCPKES 309
+SN C + T ++S ++G +K+ R + E+ + V+N +++ K +
Sbjct: 207 MSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-EPVVSVYNALINGLCKEHDYKGA 265
Query: 310 LELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALID- 368
EL+ MV G+ P++ + I+ + E +++ G + ++L+
Sbjct: 266 FELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKG 325
Query: 369 ------MYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGT 422
+ A + N R F L VV+++ +++ H ++A+S+F M+ G
Sbjct: 326 CFLRGTTFDALDLWNQMIRGFGL--QPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGC 383
Query: 423 RVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARK 482
+ +++ FAK G+L Y+ +L S GC
Sbjct: 384 SPNIRTYGSLINGFAKRGSLDGAVYIW---------------NKMLTS----GCC----- 419
Query: 483 LFDEGKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNS 542
+++ + +M+ A +H ++ + L M N P TF + ++
Sbjct: 420 ---------PNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDA 470
Query: 543 GLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIETVPLNS---DARV 599
G +D +++F++M + P+ + ++D L +A +I+EA + + + +
Sbjct: 471 GRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSST 530
Query: 600 YGPLLSACKMHSDPRLA-EVAAQKLINMEPKNAGNYVLLSNIYAAAGKWDKVAKM 653
Y LL P +A ++ + +++ + + ++ Y GK ++ A+M
Sbjct: 531 YNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM 585
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/529 (18%), Positives = 224/529 (42%), Gaps = 71/529 (13%)
Query: 88 PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRSCFSVSHE-QGKMV 146
P + Y + + G+ L +++M K + P+ +C+ L S + + K +
Sbjct: 431 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 490
Query: 147 HAQIVKLGMDAFDLVRNSLVELYEKNGFLNA-----HEPLEGMSVTELAYWNNMISQAFE 201
+ +G+ + N +++ Y K G ++ E +E ++ N++I+ ++
Sbjct: 491 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYK 550
Query: 202 SGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGE--- 258
+ +++E +++F RM++ ++P +T LL L K G+ ++ + + +
Sbjct: 551 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAG-----LGKNGKIQEAIELFEGMVQKGCP 605
Query: 259 ---LTVNTALLSMYVKLGSLKDA-RLMFEKMPRN---DLVVWNIMVSAYAGNGCPKESLE 311
+T NT L K + A +++F+ M D+ +N ++ NG KE++
Sbjct: 606 PNTITFNT-LFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMC 664
Query: 312 LVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVH-NALIDMY 370
+ M + V PD T + + + E ++ + + N +D ++ LI
Sbjct: 665 FFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSI 723
Query: 371 SACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEM--------KLCGT 422
A G+++A VS+S + A+ + C + S+ + + + G
Sbjct: 724 LAEAGIDNA------------VSFSERLVANGI---CRDGDSILVPIIRYSCKHNNVSGA 768
Query: 423 RVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARK 482
R F L K+ + L+ + IE+A+
Sbjct: 769 RTLFEKFTKDLGVQPKLPTYNL----------------------LIGGLLEADMIEIAQD 806
Query: 483 LFDEGKSSH--KDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACV 540
+F + KS+ D+ +N ++ AY K G+ + FELY +M + + +T +++ V
Sbjct: 807 VFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLV 866
Query: 541 NSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIE 589
+G VD +++ +++ + P+ + ++D L ++G++ EA ++ E
Sbjct: 867 KAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE 915
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 118/576 (20%), Positives = 232/576 (40%), Gaps = 60/576 (10%)
Query: 45 QIHARFFLHGLHQNSSLSSKLMDCYTKF----GLPGLSQKVFYFTENPDSVIYSAILRNL 100
+++ R L G + S LM K + GL +++ P+ ++ +R L
Sbjct: 209 EVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVL 268
Query: 101 SQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLRS-CFSVSHEQGKMVHAQIVKLGMDAFD 159
+ G+ + + K M ++ PD + + ++ + C + + K V ++ K G D
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM-KTGRHKPD 327
Query: 160 LVRN-SLVELYEKNGFLNA-----HEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFS 213
V +L++ + N L++ E + V ++ + ++ ++G E F
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD 387
Query: 214 RMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNT--ALLSMYVK 271
MR + I PN T L+ + +H ++ AL + +L + T T + Y K
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVH--RLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 272 LGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPDMFT 327
G A FEKM ++V N + + A G +E+ ++ Y + G+ PD T
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 328 AIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIF---- 383
+ +++ + ++ + ++ NG + V V N+LI+ + ++ A ++F
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 384 DLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGALH 443
++ TVV+++ ++ + + EA+ LF M G + I + K
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK----- 620
Query: 444 YVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKSSHKDIIAWNSMISA 503
E +L ++M K+ D G D+ +N++I
Sbjct: 621 ------------------NDEVTL--------ALKMLFKMMDMG--CVPDVFTYNTIIFG 652
Query: 504 YSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQP 563
K+G+ + ++QMK V PD VT LL V + L++ +I + QP
Sbjct: 653 LVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQP 711
Query: 564 SQEHHACMV-DLLGRAGQIDEASKIIETVPLNSDAR 598
+ ++ +L AG ID A E + N R
Sbjct: 712 ANLFWEDLIGSILAEAG-IDNAVSFSERLVANGICR 746
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 142/359 (39%), Gaps = 82/359 (22%)
Query: 186 VTELAYWNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQA 245
+ ++A +N ++ +SGK++E F+L+ M + N+IT + V L+K G
Sbjct: 817 IPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTIT-----HNIVISGLVKAGNV 871
Query: 246 LHSLIIVSNLCGELTVNTA------LLSMYVKLGSLKDARLMFEKM----PRNDLVVWNI 295
+L + +L + + L+ K G L +A+ +FE M R + ++NI
Sbjct: 872 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNI 931
Query: 296 MVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNG 355
+++ + G + L MV+ GVRPD+ T + + + + G + +G
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 356 SDYQVSVHNALIDMYSACNGLNSARRIFDLITDKTVVSWSAMIKAHAVHDQCLEALSLFI 415
+ V +N +I NGL + R+ EAL LF
Sbjct: 992 LNPDVVCYNLII------NGLGKSHRL-------------------------EEALVLFN 1020
Query: 416 EMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCG 475
EMK +R I P L+ Y SL+ + G
Sbjct: 1021 EMKT--SR-------GITPD------------LYTY-------------NSLILNLGIAG 1046
Query: 476 CIEMARKLFDEGKSS--HKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTF 532
+E A K+++E + + ++ +N++I YS G+ + +Y M P+ T+
Sbjct: 1047 MVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 105/540 (19%), Positives = 217/540 (40%), Gaps = 54/540 (10%)
Query: 85 TENPDSVIYSAILRNLSQFGEHEKTLFLYKEMVEK-SMYPDEESCSFVLRSCFSVSHEQG 143
+ PD + R L F + + + +K + ++ E+C+++L + V +
Sbjct: 77 SSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEA-LRVDGKLE 135
Query: 144 KMVHA------QIVKLGMDAFDLVRNSLVELYEKNGFLNAHEPLEGMS----VTELAYWN 193
+M + +I+K + + + SL K G A L M V +N
Sbjct: 136 EMAYVFDLMQKRIIKRDTNTYLTIFKSLSV---KGGLKQAPYALRKMREFGFVLNAYSYN 192
Query: 194 NMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLL-----RSTVDLHLLKIGQALHS 248
+I +S E +++ RM E +P+ T +L+ R +D ++ + + + +
Sbjct: 193 GLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDID-SVMGLLKEMET 251
Query: 249 LIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGN- 303
L + N+ T + + + G + +A + ++M D+V + +++ A
Sbjct: 252 LGLKPNV----YTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTAR 307
Query: 304 --GCPKESLELVYCMVRSGV-RPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQV 360
C KE E +++G +PD T I + + + + KQ + + ++G V
Sbjct: 308 KLDCAKEVFE----KMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDV 363
Query: 361 SVHNALIDMYSACNGLNSARRIFDLITDKTVVS--------WSAMIKAHAVHDQCLEALS 412
L+D A D++ D+ ++ +++ H + D AL
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDD----ALE 419
Query: 413 LFIEMKLCGTRVDFIIVINILPTFAKIG-ALHYVRYLHGYXXXXXXXXXXXXETSLLASY 471
LF M+ G + I + + K G ++ + SL S
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY-SL 478
Query: 472 AKCGCIEMARKLFDEGKSSH--KDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQ 529
AK G A+++F K D + +N M+ YSK GE + +L ++M + +PD
Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538
Query: 530 VTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIE 589
+ L+ + VD+ ++F M ++ +P+ + ++ LG+ G+I EA ++ E
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEM-KLKPTVVTYNTLLAGLGKNGKIQEAIELFE 597
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 119/636 (18%), Positives = 239/636 (37%), Gaps = 86/636 (13%)
Query: 78 SQKVFYFTEN----PDSVIYSAILRNLSQFGEHEKTLFLYKEMVEKSMYPDEESCSFVLR 133
++++FY ++ PDSV Y+ +++ S+ GE ++ + L EM+E PD + ++
Sbjct: 487 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN 546
Query: 134 SCFSVSH-EQGKMVHAQIVKLGMDAFDLVRNSLVELYEKNGFLN-AHEPLEGM------- 184
+ + ++ + ++ ++ + + N+L+ KNG + A E EGM
Sbjct: 547 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 606
Query: 185 --------------------------------SVTELAYWNNMISQAFESGKMEECFQLF 212
V ++ +N +I ++G+++E F
Sbjct: 607 NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFF 666
Query: 213 SRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNL---CGELTVN---TALL 266
+M+K + P+ +T+ LL V L++ + I++N C + N L+
Sbjct: 667 HQMKKL-VYPDFVTLCTLLPGVVKASLIE-----DAYKIITNFLYNCADQPANLFWEDLI 720
Query: 267 SMYVKLGSLKDARLMFEKMPRN------DLVVWNIMVSAYAGNGCPKESLELVYCMVRSG 320
+ + +A E++ N D ++ I+ + N G
Sbjct: 721 GSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLG 780
Query: 321 VRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSAR 380
V+P + T I + + E + + V G V+ +N L+D Y ++
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELF 840
Query: 381 RIF----------DLITDKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVI 430
++ + IT V+S ++KA V D L + T + +I
Sbjct: 841 ELYKEMSTHECEANTITHNIVIS--GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 431 NILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDE--GK 488
+ L +K G L+ + L L+ + K G + A LF +
Sbjct: 899 DGL---SKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 955
Query: 489 SSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKG 548
D+ ++ ++ G + + ++K S + PD V + ++ S +++
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015
Query: 549 KEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKI---IETVPLNSDARVYGPLLS 605
+F EM G P + ++ LG AG ++EA KI I+ L + + L+
Sbjct: 1016 LVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075
Query: 606 ACKMHSDPRLAEVAAQKLI--NMEPKNAGNYVLLSN 639
+ P A Q ++ P N G Y L N
Sbjct: 1076 GYSLSGKPEHAYAVYQTMVTGGFSP-NTGTYEQLPN 1110
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/424 (20%), Positives = 181/424 (42%), Gaps = 32/424 (7%)
Query: 205 MEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNL--CG-ELTV 261
ME L M +E I I + + +D + + + L++ L CG TV
Sbjct: 430 MERAEALVREMEEEGID----APIAIYHTMMDGYTM-VADEKKGLVVFKRLKECGFTPTV 484
Query: 262 NT--ALLSMYVKLGSLKDA----RLMFEKMPRNDLVVWNIMVSAYAGNGCPKESLELVYC 315
T L+++Y K+G + A R+M E+ +++L +++M++ + + +
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544
Query: 316 MVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNG 375
MV+ G++PD+ IS+ + + + Q + + +I Y+
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 376 LNSARRIFDLITD----KTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVIN 431
+ + +FD++ TV +++ +I Q +A+ + EM L G +
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 664
Query: 432 ILPTFAKIG----ALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDE- 486
I+ +A +G A Y L +LL + K G ++ A + E
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYE----ALLKACCKSGRMQSALAVTKEM 720
Query: 487 -GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLV 545
++ ++ +N +I +++ G+ ++ +L QMK VKPD T+ ++AC +G +
Sbjct: 721 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDM 780
Query: 546 DKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIE---TVPLNSDARVYGP 602
++ + +EM L G +P+ + + ++ RA ++A E + + D VY
Sbjct: 781 NRATQTIEEMEAL-GVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHC 839
Query: 603 LLSA 606
LL++
Sbjct: 840 LLTS 843
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 111/570 (19%), Positives = 213/570 (37%), Gaps = 86/570 (15%)
Query: 162 RNSLVELYEKNG-----FLNAHEPLEGMSVTELAYWNNMISQAFESGKMEECFQLFSRMR 216
R SL + + NG ++A E + S TE M+ G M + F RMR
Sbjct: 280 RKSLQRILDTNGDNWQAVISAFEKISKPSRTEFGL---MVKFYGRRGDMHRARETFERMR 336
Query: 217 KENIQPNSITVINLLRSTVDLHLLKIGQAL-HSLIIVSNLCGE-----LTVNTALLSMYV 270
I P S +L +H +G+ + +L V + E L + ++ +
Sbjct: 337 ARGITPTSRIYTSL------IHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFS 390
Query: 271 KLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPKESLE-LVYCMVRSGVRPDM 325
K G + A F++ R + ++ ++ A+ C E E LV M G+ +
Sbjct: 391 KAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC-QTCNMERAEALVREMEEEGIDAPI 449
Query: 326 FTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFDL 385
+ T + + G + + G V + LI++Y+ ++ A + +
Sbjct: 450 AIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRV 509
Query: 386 ITDKTV----VSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIGA 441
+ ++ V ++S MI A ++F +M G + D I+ NI+ F +G
Sbjct: 510 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGN 569
Query: 442 LH--------------------YVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCI---- 477
+ ++ +HGY + +CGC+
Sbjct: 570 MDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL----EVFDMMRRCGCVPTVH 625
Query: 478 ---------------EMARKLFDE----GKSSHKDIIAWNSMISAYSKHGEWFQCFELYN 518
E A ++ DE G S+++ + ++ Y+ G+ + FE +
Sbjct: 626 TFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEH--TYTKIMQGYASVGDTGKAFEYFT 683
Query: 519 QMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRA 578
+++ + D T+ LL AC SG + + KEM + + ++D R
Sbjct: 684 RLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM-SARNIPRNSFVYNILIDGWARR 742
Query: 579 GQIDEASKIIETVP---LNSDARVYGPLLSACKMHSDPRLAEVAAQKL--INMEPKNAGN 633
G + EA+ +I+ + + D Y +SAC D A +++ + ++P N
Sbjct: 743 GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKP-NIKT 801
Query: 634 YVLLSNIYAAAGKWDKVAKMRSFLRDRGLK 663
Y L +A A +K ++ G+K
Sbjct: 802 YTTLIKGWARASLPEKALSCYEEMKAMGIK 831
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 88/495 (17%), Positives = 203/495 (41%), Gaps = 34/495 (6%)
Query: 91 VIYSAILRNLSQFGEHEKTLFLYKE------MVEKSMYPDEESCSFVLRSCFSVSHEQGK 144
V YS I+ S+ G E + + E + S+Y + C + + E+ +
Sbjct: 380 VTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIY-----GKIIYAHCQTCNMERAE 434
Query: 145 MVHAQIVKLGMDAFDLVRNSLVELY-----EKNGFLNAHEPLE-GMSVTELAYWNNMISQ 198
+ ++ + G+DA + +++++ Y EK G + E G + T + Y +I+
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTY-GCLINL 493
Query: 199 AFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGE 258
+ GK+ + ++ M++E ++ N T ++ V L A+ ++ + +
Sbjct: 494 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 553
Query: 259 LTVNTALLSMYVKLGSLKDARLMFEKMP----RNDLVVWNIMVSAYAGNGCPKESLELVY 314
+ + ++S + +G++ A ++M R + ++ YA +G + SLE+
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD 613
Query: 315 CMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACN 374
M R G P + T I+ + + + E ++ + G + ++ Y++
Sbjct: 614 MMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 673
Query: 375 GLNSARRIFDLIT----DKTVVSWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVI 430
A F + D + ++ A++KA + AL++ EM + +
Sbjct: 674 DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYN 733
Query: 431 NILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEGKS- 489
++ +A+ G + L TS +++ +K G + A + +E ++
Sbjct: 734 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 793
Query: 490 -SHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKG 548
+I + ++I +++ + Y +MK +KPD+ + LLT+ ++ + +
Sbjct: 794 GVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
Query: 549 ------KEIFKEMVD 557
I KEMV+
Sbjct: 854 YIYSGVMTICKEMVE 868
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/384 (19%), Positives = 162/384 (42%), Gaps = 18/384 (4%)
Query: 239 LLKIGQALHSLIIVSNLCGELTVNTALLSMYVKLGSLKDARLMFEKMPRNDLVV----WN 294
+++ +AL +I S L + +L+ Y + +++ + +M + ++V+ +
Sbjct: 362 VMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYG 421
Query: 295 IMVSAYAGNGCPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHA--HVI 352
+V +G + +V M+ SG RP++ I T L+++ +G M +
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK--TFLQNSRFGDAMRVLKEMK 479
Query: 353 RNGSDYQVSVHNALIDMYSACNGLNSARRIFDLITDK----TVVSWSAMIKAHAVHDQCL 408
G + +N+LI S ++ AR + + ++ A I + +
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 409 EALSLFIEMKLCGTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLL 468
A EM+ CG + ++ ++ + K G + + T L+
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 469 ASYAKCGCIEMARKLFDE--GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVK 526
K ++ A ++F E GK D+ ++ +I+ +SK G + ++++M +
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659
Query: 527 PDQVTFLGLLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASK 586
P+ + + LL SG ++K KE+ EM + G P+ + ++D ++G + EA +
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEM-SVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 587 IIETVPLNS---DARVYGPLLSAC 607
+ + + L D+ VY L+ C
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGC 742
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/354 (19%), Positives = 143/354 (40%), Gaps = 10/354 (2%)
Query: 209 FQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLIIVSNLCGELTVNTALLSM 268
++L M+K NI + T +++ L + +I S + + T L+
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKT 461
Query: 269 YVKLGSLKDARLMFEKMPRN----DLVVWNIMVSAYAGNGCPKESLELVYCMVRSGVRPD 324
+++ DA + ++M D+ +N ++ + E+ + MV +G++P+
Sbjct: 462 FLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521
Query: 325 MFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHNALIDMYSACNGLNSARRIFD 384
FT IS + + + G + LI+ Y + A +
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYR 581
Query: 385 LITDKTVV----SWSAMIKAHAVHDQCLEALSLFIEMKLCGTRVDFIIVINILPTFAKIG 440
+ D+ ++ +++ ++ +D+ +A +F EM+ G D ++ F+K+G
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Query: 441 ALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMARKLFDEG--KSSHKDIIAWN 498
+ + LL + + G IE A++L DE K H + + +
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 499 SMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLGLLTACVNSGLVDKGKEIF 552
++I Y K G+ + F L+++MKL + PD + L+ C V++ IF
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/415 (17%), Positives = 167/415 (40%), Gaps = 22/415 (5%)
Query: 192 WNNMISQAFESGKMEECFQLFSRMRKENIQPNSITVINLLRSTVDLHLLKIGQALHSLII 251
+N++I ++ +M+E M + ++PN+ T + ++ + +
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF---ASADKYVK 546
Query: 252 VSNLCGEL---TVNTALLSMYVKLGSLKDA----RLMFEKMPRNDLVVWNIMVSAYAGNG 304
CG L + T L++ Y K G + +A R M ++ D + ++++ N
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606
Query: 305 CPKESLELVYCMVRSGVRPDMFTAIPAISSITQLKHTEWGKQMHAHVIRNGSDYQVSVHN 364
++ E+ M G+ PD+F+ I+ ++L + + + ++ G V ++N
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666
Query: 365 ALIDMYSACNGLNSARRIFDLITDK----TVVSWSAMIKAHAVHDQCLEALSLFIEMKLC 420
L+ + + A+ + D ++ K V++ +I + EA LF EMKL
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
Query: 421 GTRVDFIIVINILPTFAKIGALHYVRYLHGYXXXXXXXXXXXXETSLLASYAKCGCIEMA 480
G D + ++ ++ + + G +L+ K G E+
Sbjct: 727 GLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPF-NALINWVFKFGKTELK 785
Query: 481 RKLFDE------GKSSHKDIIAWNSMISAYSKHGEWFQCFELYNQMKLSNVKPDQVTFLG 534
++ + + + + +N MI K G EL++QM+ +N+ P +T+
Sbjct: 786 TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 535 LLTACVNSGLVDKGKEIFKEMVDLYGYQPSQEHHACMVDLLGRAGQIDEASKIIE 589
LL G + +F E + G +P ++ +++ + G +A +++
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAI-AAGIEPDHIMYSVIINAFLKEGMTTKALVLVD 899