Miyakogusa Predicted Gene

Lj6g3v1093420.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1093420.1 tr|Q0WV10|Q0WV10_ARATH Sucrose transporter
OS=Arabidopsis thaliana GN=At2g02860 PE=2 SV=1,84,0.0007,
,CUFF.59071.1
         (39 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G02860.1 | Symbols: SUT2, ATSUC3, SUC3, ATSUT2 | sucrose tran...    48   1e-06

>AT2G02860.1 | Symbols: SUT2, ATSUC3, SUC3, ATSUT2 | sucrose
           transporter 2 | chr2:828546-832296 REVERSE LENGTH=594
          Length = 594

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/25 (84%), Positives = 24/25 (96%)

Query: 7   LQTLGIAYAFSSFIWLCGPFTGLVV 31
           +QTLGI++AFSSFIWLCGP TGLVV
Sbjct: 88  IQTLGISHAFSSFIWLCGPITGLVV 112